{"meta":{"query_hash":"54ecaaa3dff4","filters":{"venue":"BMC Biology"},"cohort_total":261,"direct_labels_cover":0,"predictions_cover":261,"exported":261,"export_cap":100000,"truncated":false,"label_status":"direct model label, unvalidated","prediction_status":"machine_predicted_unvalidated (Codex and Gemma teacher distillation)","score_status":"score_only:v0-immature-baseline","snapshot":{"source":"OpenAlex, pinned release, all 482 partitions","release":"2026-06-24","frame_built":"2026-07-12"},"permalink":"https://metacan.xera.ac/q/54ecaaa3dff4","api":"https://metacan.xera.ac/api/v1/cohort?venue=BMC+Biology"},"results":[{"id":"W1510961225","doi":"10.1186/1741-7007-4-25","title":"The neurochemical basis of human cortical auditory processing: combining proton magnetic resonance spectroscopy and magnetoencephalography","year":2006,"lang":"en","type":"article","venue":"BMC Biology","topic":"Neuroscience and Music Perception","field":"Neuroscience","cited_by":18,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Health Sciences Centre; Sunnybrook Health Science Centre","funders":"Heart and Stroke Foundation of Canada","keywords":"Neurochemistry; Neurochemical; Magnetoencephalography; Auditory cortex; Choline; Neuroscience; Glutamate receptor; Electrophysiology; Glutamine; Biology; Electroencephalography; Neurology; Biochemistry; Amino acid","score_opus":0.023646354585671596,"score_gpt":0.2848584199125314,"score_spread":0.2612120653268598,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1510961225","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9982167,0.00038944968,0.0010440333,0.000024752824,0.0000022621414,0.000017891949,0.00008799011,0.0000086360715,0.0002082999],"genre_scores_gemma":[0.9986993,0.00017279538,0.00094953575,0.00001765928,0.00000783073,0.000009230235,0.00007575757,0.0000016407905,0.00006620138],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.999933,0.000013629707,0.000006229503,0.000026329913,0.000013130407,0.000007776941],"domain_scores_gemma":[0.99983764,0.000057360994,0.000051255374,0.000010400527,0.000023408305,0.00001996207],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002570346,0.0003664098,0.00018169265,0.000455539,0.00010274752,0.0002506987,0.00013971425,0.00032840198,0.0006212913],"category_scores_gemma":[0.0006436608,0.00013105142,0.00009737041,0.00019434116,0.00023769827,0.00023506855,0.00019456272,0.00016769544,0.000107454645],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.002137205,0.0001874331,0.6717525,0.00030004387,0.00031930304,0.0023375843,0.00031679554,0.00067288434,0.27096936,0.00008787377,0.0002161545,0.050702874],"study_design_scores_gemma":[0.000021012343,0.0004143424,0.98794496,0.0000074671443,0.00004516528,0.0026643288,0.00009467579,0.0005214608,0.008025977,0.00010783531,0.00014570191,0.000007121469],"about_ca_topic_score_codex":0.0008766794,"about_ca_topic_score_gemma":0.0015582978,"teacher_disagreement_score":0.0008766794,"about_ca_system_score_codex":0.000111010595,"about_ca_system_score_gemma":0.00012836646,"threshold_uncertainty_score":0.002078414},"labels":[],"label_agreement":null},{"id":"W1551084082","doi":"10.1186/1741-7007-3-11","title":"Microtubule plus-ends reveal essential links between intracellular polarization and localized modulation of endocytosis during division-plane establishment in plant cells","year":2005,"lang":"en","type":"article","venue":"BMC Biology","topic":"Plant Molecular Biology Research","field":"Agricultural and Biological Sciences","cited_by":114,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"RIKEN; Nederlandse Organisatie voor Wetenschappelijk Onderzoek","keywords":"Phragmoplast; Cytokinesis; Biology; Cell plate; Cell biology; Microtubule; Cell division; Mitosis; Cleavage furrow; Cell polarity; Spindle apparatus; Intracellular; Cell; Genetics","score_opus":0.015056715457490644,"score_gpt":0.2374064891684197,"score_spread":0.22234977371092904,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1551084082","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99672925,0.0004600531,0.0018527007,0.000021884794,0.000004386277,0.0000038040987,0.00012680939,0.000020220908,0.0007808832],"genre_scores_gemma":[0.9971576,0.00022882654,0.0012891886,0.000014452011,0.0000024014068,0.0000059646736,0.00025943393,0.0000076284095,0.001034521],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99996734,0.0000032609942,0.0000018515207,0.000008013355,0.000009524892,0.0000100004],"domain_scores_gemma":[0.9999286,0.000014043749,0.000023468712,0.0000083165605,0.000012223666,0.000013310983],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000054086184,0.0001137545,0.000080449136,0.0001486487,0.00017280686,0.00023524504,0.00011442957,0.0002201737,0.0008581955],"category_scores_gemma":[0.000092721886,0.00011065021,0.00008675788,0.00008840192,0.0001315654,0.00023348177,0.00015558678,0.00027291986,0.00030713255],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007084044,0.0000057056272,0.0006276343,0.000013058941,0.0000016187788,0.000050272116,0.000011591579,0.000041015453,0.9982382,0.00012423877,0.0000143475845,0.00080150954],"study_design_scores_gemma":[0.000007910309,0.00006272384,0.04231542,0.0000056894155,0.000009788741,0.0004178374,0.00004666813,0.0018457113,0.95366573,0.00015988342,0.0014583571,0.000004262321],"about_ca_topic_score_codex":0.00044131916,"about_ca_topic_score_gemma":0.0011081415,"teacher_disagreement_score":0.0008581955,"about_ca_system_score_codex":0.0003130426,"about_ca_system_score_gemma":0.00008340747,"threshold_uncertainty_score":0.0028709173},"labels":[],"label_agreement":null},{"id":"W1697076741","doi":"10.1186/1741-7007-4-3","title":"The complete chloroplast DNA sequence of the green alga Oltmannsiellopsis viridis reveals a distinctive quadripartite architecture in the chloroplast genome of early diverging ulvophytes","year":2006,"lang":"en","type":"article","venue":"BMC Biology","topic":"Genomics and Phylogenetic Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":110,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Biology; Chloroplast DNA; Inverted repeat; Genome; Genetics; Ulvophyceae; Gene; Chlorophyta; Botany","score_opus":0.01733985693581827,"score_gpt":0.2300344684822388,"score_spread":0.21269461154642053,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1697076741","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9927458,0.00070342683,0.0017071769,0.000025831605,0.000008105448,0.000019430574,0.0041665896,0.00004843112,0.0005750998],"genre_scores_gemma":[0.9659611,0.00053471135,0.006292462,0.000093813345,0.000010043671,0.000046950332,0.025617678,0.000050151062,0.0013931629],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9998969,0.0000061655887,0.0000083550985,0.000044016917,0.00003096679,0.0000135383],"domain_scores_gemma":[0.99973136,0.000051281557,0.00007846568,0.000029535147,0.000045782814,0.00006359127],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000083443825,0.00029702845,0.00021682297,0.0005683762,0.00019693287,0.0002424179,0.00019911742,0.00028850327,0.0008377475],"category_scores_gemma":[0.0002533766,0.00011518265,0.00029116735,0.00060741906,0.00019145521,0.00014696634,0.00020292233,0.00036989173,0.0005121747],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012777864,0.000016947504,0.004357888,0.00011184649,0.000016343207,0.000103405786,0.00008694057,0.00012679888,0.9910451,0.000054396416,0.000041970365,0.003910593],"study_design_scores_gemma":[0.000064611355,0.0005062759,0.7527464,0.00013623924,0.00024726524,0.002616724,0.00052103633,0.0015280788,0.22731258,0.00034654292,0.013923411,0.000050879225],"about_ca_topic_score_codex":0.0019198623,"about_ca_topic_score_gemma":0.0035537179,"teacher_disagreement_score":0.0019198623,"about_ca_system_score_codex":0.0003491231,"about_ca_system_score_gemma":0.0005052162,"threshold_uncertainty_score":0.0038173795},"labels":[],"label_agreement":null},{"id":"W1749319359","doi":"10.1186/1741-7007-5-3","title":"Host-driven diversification of gall-inducing Acacia thrips and the aridification of Australia","year":2007,"lang":"en","type":"article","venue":"BMC Biology","topic":"Hymenoptera taxonomy and phylogeny","field":"Agricultural and Biological Sciences","cited_by":69,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Memorial University of Newfoundland","funders":"","keywords":"Aridification; Biology; Acacia; Gall; Ecology; Thrips; Niche; Biodiversity; Arid; Botany","score_opus":0.06949057843135775,"score_gpt":0.2659421484975999,"score_spread":0.19645157006624214,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1749319359","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9996501,0.000058122187,0.000050175895,0.000013733426,2.1057306e-7,9.88456e-7,0.000020180265,0.0000010252959,0.0002053975],"genre_scores_gemma":[0.9998197,0.00003189337,0.000057042962,0.0000050186536,6.0469904e-7,9.713037e-7,0.000025457699,3.895093e-7,0.000059033024],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9999281,0.000017404303,0.00000404186,0.000021190703,0.000012143372,0.000017047467],"domain_scores_gemma":[0.9995814,0.000072478884,0.00019950209,0.00001778061,0.000051112605,0.00007775842],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002725007,0.00009311255,0.00010754834,0.0005255598,0.00029505105,0.00029609003,0.00018287542,0.00017297336,0.0013329718],"category_scores_gemma":[0.00055101694,0.00007048921,0.00009998608,0.00034350314,0.0003058687,0.00021209496,0.00041779142,0.00019408949,0.00007602987],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015698299,0.000028894012,0.9361476,0.00008864364,0.00005549728,0.00026672223,0.0018346339,0.0005446486,0.04883258,0.0003877447,0.000104385996,0.01155164],"study_design_scores_gemma":[7.827261e-7,0.000015635722,0.9991831,0.0000025173435,0.0000045288984,0.00007095039,0.00014204504,0.00023121714,0.00020075642,0.000040814393,0.00010647451,0.0000010367933],"about_ca_topic_score_codex":0.008652591,"about_ca_topic_score_gemma":0.01545541,"teacher_disagreement_score":0.008652591,"about_ca_system_score_codex":0.00042898004,"about_ca_system_score_gemma":0.00024271508,"threshold_uncertainty_score":0.017204463},"labels":[],"label_agreement":null},{"id":"W1918830255","doi":"10.1186/s12915-015-0192-7","title":"Sympatric ecological divergence associated with a color polymorphism","year":2015,"lang":"en","type":"article","venue":"BMC Biology","topic":"Animal Behavior and Reproduction","field":"Agricultural and Biological Sciences","cited_by":41,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"European Research Council; Natural Sciences and Engineering Research Council of Canada; Universität Konstanz; Deutsche Forschungsgemeinschaft; Canadian Network for Research and Innovation in Machining Technology, Natural Sciences and Engineering Research Council of Canada; Alexander von Humboldt-Stiftung","keywords":"Biology; Sympatric speciation; Cichlid; Adaptive radiation; Allopatric speciation; Ecology; Ecological speciation; Intraspecific competition; Evolutionary biology; Genetic architecture; Population; Genetic variation; Phylogenetics; Gene flow; Quantitative trait locus; Gene; Genetics","score_opus":0.06600890338614783,"score_gpt":0.24649061054389715,"score_spread":0.1804817071577493,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1918830255","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9996482,0.000033639666,0.00008758154,0.000003978994,5.9025876e-7,0.0000020868097,0.000042363376,0.0000026266655,0.00017904038],"genre_scores_gemma":[0.9997391,0.000010624848,0.00013280308,0.000005002872,0.000001178105,0.0000043547234,0.00006241201,0.0000016428999,0.000042924647],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99973947,0.00004789259,0.00002409236,0.000119634526,0.00003599854,0.000032944015],"domain_scores_gemma":[0.9990988,0.00017489983,0.00035662472,0.00010796817,0.00011122145,0.0001505198],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003003193,0.0001985161,0.00026979923,0.0011516277,0.0005440815,0.0003949563,0.0003576091,0.00031029113,0.0012654316],"category_scores_gemma":[0.00077208265,0.00012905597,0.00014803397,0.0006761331,0.0007244401,0.00019111487,0.00084661134,0.0003129558,0.00009105003],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00023212367,0.000057334826,0.879428,0.00007071106,0.00015941307,0.00026659115,0.0013033613,0.00017502894,0.11371684,0.00025947575,0.00007819377,0.0042529358],"study_design_scores_gemma":[0.0000023225025,0.000028200637,0.99882275,0.0000020065493,0.000011180057,0.00027078745,0.00020476809,0.00013218528,0.00037821362,0.000066545246,0.00007785376,0.0000030535473],"about_ca_topic_score_codex":0.0016081892,"about_ca_topic_score_gemma":0.0053555127,"teacher_disagreement_score":0.0016081892,"about_ca_system_score_codex":0.0003723185,"about_ca_system_score_gemma":0.00019774366,"threshold_uncertainty_score":0.0042333007},"labels":[],"label_agreement":null},{"id":"W1931051342","doi":"10.1186/s12915-015-0152-2","title":"Sequencing strategies and characterization of 721 vervet monkey genomes for future genetic analyses of medically relevant traits","year":2015,"lang":"en","type":"article","venue":"BMC Biology","topic":"Genetic Associations and Epidemiology","field":"Biochemistry, Genetics and Molecular Biology","cited_by":52,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"National Center for Research Resources; National Human Genome Research Institute; National Institutes of Health","keywords":"Biology; Single-nucleotide polymorphism; Genetics; Linkage disequilibrium; Genome; Genetic association; Vervet monkey; Genome-wide association study; Human genome; Genetic linkage; Evolutionary biology; Genotype; Gene","score_opus":0.06380322099493894,"score_gpt":0.32890168673919246,"score_spread":0.2650984657442535,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1931051342","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.80427605,0.0044161794,0.10268287,0.00076841324,0.00012151583,0.0007117207,0.073799476,0.0014510533,0.011772777],"genre_scores_gemma":[0.49724182,0.0027002846,0.25301066,0.0008575461,0.00013211308,0.0014290465,0.23802795,0.00090073416,0.005699758],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99946886,0.00011096034,0.000035808105,0.00020679257,0.00011155176,0.00006607048],"domain_scores_gemma":[0.99887353,0.0003033382,0.00021785857,0.00022877633,0.00025520675,0.00012127379],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010557405,0.00069351523,0.0007401338,0.0020837332,0.0010923523,0.0011071934,0.0007257499,0.0007972919,0.0036271922],"category_scores_gemma":[0.0024349068,0.00035965143,0.00085927837,0.0026752073,0.00024503283,0.00038488695,0.00091916654,0.0010716103,0.0019390122],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00091440434,0.00021270887,0.04226548,0.0012301722,0.00039517824,0.0014452484,0.0019226975,0.0053129727,0.83154595,0.003315461,0.0053487127,0.106091075],"study_design_scores_gemma":[0.0002600844,0.0006335047,0.5453393,0.0005982563,0.00090828777,0.0033768006,0.0012871989,0.025178358,0.13822332,0.00798349,0.27606985,0.000141566],"about_ca_topic_score_codex":0.004035455,"about_ca_topic_score_gemma":0.014306887,"teacher_disagreement_score":0.004035455,"about_ca_system_score_codex":0.0005950196,"about_ca_system_score_gemma":0.0009313178,"threshold_uncertainty_score":0.012134135},"labels":[],"label_agreement":null},{"id":"W1936637179","doi":"10.1186/s12915-015-0154-0","title":"Quantification of gait parameters in freely walking rodents","year":2015,"lang":"en","type":"article","venue":"BMC Biology","topic":"Lower Extremity Biomechanics and Pathologies","field":"Engineering","cited_by":116,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University","funders":"National Institute of Neurological Disorders and Stroke; National Institutes of Health; Ellison Medical Foundation","keywords":"Kinematics; Footprint; Gait; Biology; Software; Set (abstract data type); Computer science; Simulation; Neuroscience; Computer vision; Artificial intelligence; Physics","score_opus":0.08810217181725986,"score_gpt":0.274929079682155,"score_spread":0.18682690786489514,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1936637179","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8394151,0.0011563081,0.14917636,0.000044875145,0.000045162626,0.00020561932,0.004927445,0.003089331,0.0019398473],"genre_scores_gemma":[0.81340104,0.0013065687,0.17144132,0.00012213226,0.000023599996,0.00090399734,0.008771432,0.00070378307,0.0033261979],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9996309,0.000042946576,0.000037042362,0.00014579928,0.00010869086,0.000034523848],"domain_scores_gemma":[0.9991704,0.00012781276,0.00034139224,0.00011532361,0.0001333711,0.00011163442],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00043061064,0.00059717224,0.00028687596,0.0015772659,0.00015601554,0.00036929274,0.00036809503,0.0003267842,0.0021125828],"category_scores_gemma":[0.0005958487,0.0002520115,0.00031875898,0.00044948768,0.00030400112,0.00031990246,0.00036989807,0.0005685575,0.00048664934],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003239371,0.000100760124,0.012761628,0.00020060493,0.000052317853,0.000087565124,0.00009234073,0.0008025656,0.95681155,0.0003456334,0.00042105443,0.028000105],"study_design_scores_gemma":[0.000072796225,0.0025077506,0.26997498,0.00018360231,0.00019649771,0.0014736796,0.00018722175,0.011478446,0.70628166,0.0013402989,0.006195813,0.00010732607],"about_ca_topic_score_codex":0.00025875482,"about_ca_topic_score_gemma":0.00073285034,"teacher_disagreement_score":0.0021125828,"about_ca_system_score_codex":0.00020927082,"about_ca_system_score_gemma":0.0001865156,"threshold_uncertainty_score":0.0070673227},"labels":[],"label_agreement":null},{"id":"W1964886582","doi":"10.1186/1741-7007-6-13","title":"Hue-shifted monomeric variants of Clavulariacyan fluorescent protein: identification of the molecular determinants of color and applications in fluorescence imaging","year":2008,"lang":"en","type":"article","venue":"BMC Biology","topic":"Advanced Fluorescence Microscopy Techniques","field":"Biochemistry, Genetics and Molecular Biology","cited_by":139,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"Natural Sciences and Engineering Research Council of Canada; Canada Research Chairs; Faculty of Medicine, Dentistry and Health Sciences, University of Western Australia; University of Alberta; Universities Space Research Association","keywords":"Chromophore; Cyan; Fluorescence; Mutagenesis; Green fluorescent protein; Biology; Mutant; Fluorescent protein; Yellow fluorescent protein; Biophysics; Blue light; Photochemistry; Biochemistry; Chemistry; Gene; Physics; Optics","score_opus":0.008932992854853746,"score_gpt":0.2721638158860047,"score_spread":0.2632308230311509,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1964886582","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9922998,0.00075312884,0.0060896804,0.000064557484,0.000011072684,0.000031362717,0.00014903968,0.00006127295,0.00053995044],"genre_scores_gemma":[0.98878366,0.00048502217,0.009375618,0.000043258915,0.000006303828,0.000023290548,0.00046540418,0.000045273948,0.00077228236],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99988437,0.00001635117,0.000010508273,0.000024697987,0.00004632719,0.000017687791],"domain_scores_gemma":[0.9997663,0.00004455757,0.00006626509,0.000028310635,0.000028104922,0.00006641351],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00023181702,0.00024478158,0.00017486667,0.00018626821,0.0001417598,0.0003015208,0.0004508686,0.0002780678,0.0006211266],"category_scores_gemma":[0.00030085776,0.00010469871,0.00020146428,0.0002401535,0.0002955922,0.00016947748,0.00024276298,0.000752037,0.00021562763],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00004155075,0.000015457459,0.0002832984,0.000014218027,0.0000029303505,0.00004088102,0.000013376066,0.00007394461,0.9987386,0.00007783221,0.000011302427,0.0006865449],"study_design_scores_gemma":[0.000008136282,0.00010058362,0.0033026321,0.0000046785876,0.000012724004,0.0006463631,0.00003003982,0.0011060038,0.99328035,0.000067186964,0.0014356292,0.000005757171],"about_ca_topic_score_codex":0.0006447066,"about_ca_topic_score_gemma":0.00072149263,"teacher_disagreement_score":0.0006447066,"about_ca_system_score_codex":0.0004064683,"about_ca_system_score_gemma":0.0002186009,"threshold_uncertainty_score":0.0029491782},"labels":[],"label_agreement":null},{"id":"W1967957152","doi":"10.1186/1741-7007-5-24","title":"Design and applicability of DNA arrays and DNA barcodes in biodiversity monitoring","year":2007,"lang":"en","type":"article","venue":"BMC Biology","topic":"Environmental DNA in Biodiversity Studies","field":"Environmental Science","cited_by":184,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"Ontario Genomics; Ontario Genomics Institute; Genome Canada; Gordon and Betty Moore Foundation","keywords":"Biology; DNA barcoding; Barcode; Computational biology; DNA; Environmental DNA; Mitochondrial DNA; DNA sequencing; Cytochrome b; Evolutionary biology; Biodiversity; Genetics; Gene; Ecology","score_opus":0.030369283253619993,"score_gpt":0.23636750250823818,"score_spread":0.2059982192546182,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1967957152","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.05607702,0.0036464317,0.932636,0.00073227764,0.00035879534,0.0010060293,0.000928769,0.001497592,0.0031169902],"genre_scores_gemma":[0.11762558,0.0017268404,0.8747703,0.0005882719,0.00007252769,0.0015554946,0.0010150239,0.00012915977,0.002516783],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99389994,0.00225552,0.0003453502,0.0015219317,0.0016517183,0.00032542006],"domain_scores_gemma":[0.99445313,0.002370702,0.0009847677,0.00050167425,0.0014170662,0.00027255638],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.004068791,0.0010559859,0.00065870467,0.0014671149,0.00052604196,0.0014055202,0.0016486447,0.0022844514,0.0019313166],"category_scores_gemma":[0.009129971,0.00091120705,0.00065065746,0.0011302647,0.0013363429,0.001318857,0.0010447607,0.0013797127,0.0018048168],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00044579594,0.0002545141,0.004745903,0.0010590808,0.000087829314,0.00016042577,0.00025423415,0.010399765,0.8642216,0.0064782156,0.0011291574,0.110763505],"study_design_scores_gemma":[0.00005519337,0.0010912267,0.004121185,0.00020470793,0.00011641005,0.0005092535,0.0001660033,0.042284515,0.91572994,0.0043561985,0.03122653,0.00013880072],"about_ca_topic_score_codex":0.00073605706,"about_ca_topic_score_gemma":0.0011027929,"teacher_disagreement_score":0.004068791,"about_ca_system_score_codex":0.0009294992,"about_ca_system_score_gemma":0.000986595,"threshold_uncertainty_score":0.021518111},"labels":[],"label_agreement":null},{"id":"W1969308325","doi":"10.1186/1741-7007-6-41","title":"Resilin and chitinous cuticle form a composite structure for energy storage in jumping by froghopper insects","year":2008,"lang":"en","type":"article","venue":"BMC Biology","topic":"Biomimetic flight and propulsion mechanisms","field":"Engineering","cited_by":177,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University","funders":"","keywords":"Jumping; Anatomy; Biology; Jump; Hindlimb; Mechanical energy; Biophysics; Power (physics); Physics","score_opus":0.012247947761264888,"score_gpt":0.2080990673220212,"score_spread":0.1958511195607563,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1969308325","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99809784,0.0004728197,0.00062747276,0.000016457345,0.0000029117284,0.0000063863713,0.00005562396,0.000020902276,0.0006996564],"genre_scores_gemma":[0.99783736,0.00011954466,0.0012494049,0.000014034279,0.0000018591185,0.000005574811,0.00012190212,0.0000063139323,0.00064395973],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99995697,0.00000483302,0.0000029961775,0.000015618505,0.00000838624,0.000011203251],"domain_scores_gemma":[0.99994147,0.0000061411924,0.000021548745,0.0000055964106,0.000007387022,0.000017877286],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00007173976,0.00025004343,0.000116628275,0.00025536236,0.00020660482,0.00024978086,0.00020232129,0.00028401683,0.001199301],"category_scores_gemma":[0.00009502928,0.00015679265,0.00025890485,0.00010780781,0.00024753265,0.00032672938,0.0002898111,0.00016717799,0.00028350495],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00005814607,0.000009712236,0.002535765,0.00006284386,0.00001228544,0.00010653024,0.000030633197,0.000121307756,0.9952722,0.00007414312,0.00002445902,0.0016918905],"study_design_scores_gemma":[0.000038344067,0.00091270707,0.37188664,0.00006187519,0.000119630255,0.0026011106,0.0004991654,0.004739347,0.6142326,0.00040668875,0.004466033,0.000035821235],"about_ca_topic_score_codex":0.0004010595,"about_ca_topic_score_gemma":0.00043295886,"teacher_disagreement_score":0.001199301,"about_ca_system_score_codex":0.00021388632,"about_ca_system_score_gemma":0.000099353754,"threshold_uncertainty_score":0.0040120482},"labels":[],"label_agreement":null},{"id":"W1969390020","doi":"10.1186/s12915-014-0106-0","title":"Peripheral residence of naïve CD4 T cells induces MHC class II-dependent alterations in phenotype and function","year":2014,"lang":"en","type":"article","venue":"BMC Biology","topic":"T-cell and B-cell Immunology","field":"Immunology and Microbiology","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University Health Network","funders":"National Institute of Allergy and Infectious Diseases; National Institutes of Health; National Institute of Immunology; Arkansas Biosciences Institute","keywords":"Biology; Phenotype; MHC class II; Function (biology); Major histocompatibility complex; MHC class I; Immunology; Molecular biology; Genetics; Immune system; Gene","score_opus":0.016838633970726203,"score_gpt":0.23355995088320242,"score_spread":0.2167213169124762,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1969390020","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99824905,0.00035285376,0.000698845,0.000024154695,0.000012979816,0.000010830914,0.000055202454,0.00005207979,0.0005439401],"genre_scores_gemma":[0.9978934,0.00012369762,0.00061764696,0.000035970297,0.000012481393,0.000023268753,0.00014505669,0.000014260602,0.001134155],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997665,0.000034343575,0.000015151383,0.000056499783,0.000036678855,0.00009079411],"domain_scores_gemma":[0.9998098,0.000029815044,0.000051402607,0.000027878381,0.000014935378,0.00006629775],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013447105,0.00033806884,0.00019885767,0.00017085747,0.00014767179,0.00032871775,0.00017776039,0.00027078338,0.0022133864],"category_scores_gemma":[0.00014427306,0.00017528902,0.00017719467,0.000097669195,0.00023989903,0.00016437907,0.00021550985,0.000861893,0.00041342605],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015797369,0.00003310263,0.00028265765,0.000017768702,0.0000017889004,0.000034715056,0.000008504824,0.000015194303,0.99884415,0.000023665598,0.00001447201,0.0005659797],"study_design_scores_gemma":[0.00004733666,0.0014149029,0.015240193,0.0000079261545,0.000020319634,0.00047784267,0.000057387155,0.00061554223,0.9809967,0.00007352526,0.001044361,0.000003866242],"about_ca_topic_score_codex":0.00014297233,"about_ca_topic_score_gemma":0.00024726964,"teacher_disagreement_score":0.0022133864,"about_ca_system_score_codex":0.00020083328,"about_ca_system_score_gemma":0.00016526671,"threshold_uncertainty_score":0.007404506},"labels":[],"label_agreement":null},{"id":"W1972693900","doi":"10.1186/1741-7007-8-152","title":"DrosophilaEGFR pathway coordinates stem cell proliferation and gut remodeling following infection","year":2010,"lang":"en","type":"article","venue":"BMC Biology","topic":"Invertebrate Immune Response Mechanisms","field":"Immunology and Microbiology","cited_by":394,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Institute of Genetics; École Polytechnique Fédérale de Lausanne; Schweizerischer Nationalfonds zur Förderung der Wissenschaftlichen Forschung; National Science Foundation","keywords":"Biology; Cell biology; Stem cell; Morphogenesis; Signal transduction; Intestinal epithelium; Cellular differentiation; STAT protein; JAK-STAT signaling pathway; Transcription factor; STAT3; Epithelium; Receptor tyrosine kinase; Genetics","score_opus":0.013673088089594086,"score_gpt":0.23009350444457582,"score_spread":0.21642041635498174,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1972693900","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9932185,0.0013881548,0.0020033717,0.00008323331,0.000014257585,0.000022218917,0.00076532224,0.00013523312,0.0023698],"genre_scores_gemma":[0.99291575,0.0005852576,0.0019650243,0.00006675828,0.000005241609,0.00003153913,0.0008556729,0.000028683095,0.0035461092],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99990773,0.000008325822,0.0000061259643,0.000022590099,0.00002567348,0.000029583436],"domain_scores_gemma":[0.9999001,0.000009051379,0.000038746097,0.0000065751656,0.000014479891,0.00003110256],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000057019108,0.00034710878,0.0001251506,0.00040366658,0.00017810446,0.00027914412,0.00018424094,0.00029353175,0.0013496482],"category_scores_gemma":[0.00005024242,0.00013241166,0.0001759139,0.00009596962,0.00017189136,0.00018694004,0.00026566256,0.00045687016,0.00033195518],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000041927233,0.000006819329,0.00036003103,0.00002204859,0.0000019895822,0.000056712775,0.000009593364,0.000056519264,0.99854636,0.00010410484,0.00004362458,0.0007502357],"study_design_scores_gemma":[0.00001733587,0.000113865404,0.040549893,0.00001730135,0.000018255438,0.00035542055,0.00008481399,0.0023136681,0.95289314,0.0001143441,0.0035135637,0.00000830763],"about_ca_topic_score_codex":0.0009541079,"about_ca_topic_score_gemma":0.0018380571,"teacher_disagreement_score":0.0013496482,"about_ca_system_score_codex":0.0004943237,"about_ca_system_score_gemma":0.00021215362,"threshold_uncertainty_score":0.004515052},"labels":[],"label_agreement":null},{"id":"W1974357948","doi":"10.1186/1741-7007-11-95","title":"Tony Pawson and the germination and flowering of cell signaling: an appreciation","year":2013,"lang":"en","type":"editorial","venue":"BMC Biology","topic":"Genetics, Bioinformatics, and Biomedical Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Biology; Germination; Cell biology; Botany","score_opus":0.011755657109691753,"score_gpt":0.27908456881957217,"score_spread":0.26732891170988043,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1974357948","genre_codex":"commentary","genre_gemma":"editorial","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"editorial","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0015303764,0.10316137,0.0009326141,0.82965165,0.059981864,0.00000774246,0.000042326792,0.0000761116,0.0046159094],"genre_scores_gemma":[0.049472842,0.16810516,0.004096597,0.540721,0.14956498,0.000067994435,0.00011116966,0.0003858884,0.087474376],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99790156,0.0005760264,0.00008112556,0.00037678255,0.00085069303,0.00021378283],"domain_scores_gemma":[0.994381,0.0019636846,0.0002613147,0.00017381767,0.0011002315,0.0021199572],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.004569208,0.00069689646,0.00087058515,0.00066444953,0.0022893276,0.0041228957,0.0012582002,0.0039757597,0.00362702],"category_scores_gemma":[0.0074175266,0.00041838948,0.0004980673,0.0004533214,0.0044013704,0.0049548317,0.0021248995,0.017052798,0.0018768606],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008592439,0.00002592744,0.00036587744,0.0001291887,0.000014232058,0.0005980235,0.0011402033,0.00006484912,0.0012102932,0.01365235,0.95624155,0.026471626],"study_design_scores_gemma":[0.000013268685,0.000036922578,0.0005852015,0.0001782114,0.000005213902,0.0007959909,0.0008534436,0.00010243643,0.00035915847,0.008626358,0.9884163,0.00002750054],"about_ca_topic_score_codex":0.0037124804,"about_ca_topic_score_gemma":0.005444609,"teacher_disagreement_score":0.004569208,"about_ca_system_score_codex":0.0025532502,"about_ca_system_score_gemma":0.0028335978,"threshold_uncertainty_score":0.024164557},"labels":[],"label_agreement":null},{"id":"W1976094206","doi":"10.1186/s12915-014-0112-2","title":"Retarded PDI diffusion and a reductive shift in poise of the calcium depleted endoplasmic reticulum","year":2015,"lang":"en","type":"article","venue":"BMC Biology","topic":"Endoplasmic Reticulum Stress and Disease","field":"Biochemistry, Genetics and Molecular Biology","cited_by":51,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"European Commission; University of Alberta; University of Oregon; Wellcome Trust","keywords":"Endoplasmic reticulum; Calcium; Calreticulin; Biology; Protein disulfide-isomerase; Cell biology; Biochemistry; Chaperone (clinical); Unfolded protein response; Biophysics; Calcium-binding protein; Calcium signaling; Calcium metabolism; Intracellular; Chemistry","score_opus":0.020711455626501563,"score_gpt":0.2631316852276204,"score_spread":0.24242022960111886,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1976094206","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9918162,0.0011360457,0.0053633535,0.00018546464,0.000031924057,0.000035387093,0.00031620768,0.00012615728,0.0009892797],"genre_scores_gemma":[0.99464345,0.00035888093,0.002444161,0.000058810514,0.000009202521,0.00003214085,0.00047674423,0.000030530922,0.00194612],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99986494,0.000014551129,0.000010865043,0.0000481522,0.000033194025,0.000028353932],"domain_scores_gemma":[0.9997676,0.000030078092,0.000085936,0.000033827677,0.000040957537,0.000041562827],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00021281856,0.00033079987,0.00029094756,0.00017483499,0.00022583088,0.00045885824,0.00041901733,0.00038723333,0.00091386365],"category_scores_gemma":[0.00027225039,0.00017865912,0.00022264487,0.0001650774,0.0003879128,0.0003816903,0.00040451385,0.0006643441,0.00037950955],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00027235056,0.000018347084,0.00022582078,0.000037724876,0.000004993924,0.000049559098,0.00002158288,0.000049042108,0.9984023,0.0001810005,0.000040236122,0.00069701596],"study_design_scores_gemma":[0.000019465071,0.00009199705,0.0034771345,0.000005514156,0.0000075069584,0.00021743047,0.000028726,0.0012028867,0.9930951,0.0001414259,0.001705974,0.0000069201737],"about_ca_topic_score_codex":0.00038437397,"about_ca_topic_score_gemma":0.00029318494,"teacher_disagreement_score":0.00091386365,"about_ca_system_score_codex":0.0005050287,"about_ca_system_score_gemma":0.0002344861,"threshold_uncertainty_score":0.0036642551},"labels":[],"label_agreement":null},{"id":"W1978989086","doi":"10.1186/1741-7007-8-92","title":"Q&amp;A: Robotics as a tool to understand the brain","year":2010,"lang":"en","type":"article","venue":"BMC Biology","topic":"EEG and Brain-Computer Interfaces","field":"Neuroscience","cited_by":20,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Queen's University","funders":"Wellcome Trust","keywords":"Biology; Robotics; Cognitive science; Computational biology; Artificial intelligence; Neuroscience; Engineering ethics; Robot; Computer science; Engineering","score_opus":0.08082739413150813,"score_gpt":0.3315257506424176,"score_spread":0.2506983565109095,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1978989086","genre_codex":"methods","genre_gemma":"commentary","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"commentary","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0028188084,0.039763458,0.602147,0.042663645,0.020956513,0.00046518925,0.0034502526,0.0297844,0.25795075],"genre_scores_gemma":[0.08025252,0.057144653,0.5470782,0.008237685,0.019578237,0.0009487591,0.0033748972,0.010393561,0.27299148],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99832183,0.0003695783,0.00012304875,0.00020409896,0.00087146065,0.0001098621],"domain_scores_gemma":[0.99462897,0.0026821385,0.00025481152,0.0005712454,0.0009689788,0.0008939383],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.003563454,0.0015732925,0.000719867,0.005663538,0.0017034269,0.007573029,0.0020675086,0.0032667753,0.08725238],"category_scores_gemma":[0.009086106,0.0006641517,0.0007457891,0.003994482,0.00454952,0.0071364613,0.0031256343,0.0023417105,0.030379623],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000094054776,0.000046806243,0.0003697673,0.0017295007,0.00003547473,0.00020818839,0.00035657638,0.0009002436,0.0049652085,0.10396536,0.41092688,0.47640198],"study_design_scores_gemma":[0.00003510169,0.00008159465,0.000518684,0.00023862092,0.000015485957,0.0005805111,0.00016797421,0.0033091279,0.0022639465,0.08762141,0.9051202,0.000047335678],"about_ca_topic_score_codex":0.0014193957,"about_ca_topic_score_gemma":0.0018609494,"teacher_disagreement_score":0.08725238,"about_ca_system_score_codex":0.0011400556,"about_ca_system_score_gemma":0.0029530202,"threshold_uncertainty_score":0.2918883},"labels":[],"label_agreement":null},{"id":"W1979050814","doi":"10.1186/1741-7007-10-73","title":"TWIST1 associates with NF-κB subunit RELA via carboxyl-terminal WR domain to promote cell autonomous invasion through IL8 production","year":2012,"lang":"en","type":"article","venue":"BMC Biology","topic":"NF-κB Signaling Pathways","field":"Biochemistry, Genetics and Molecular Biology","cited_by":58,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Stemcell Technologies","funders":"National Institutes of Health; National Cancer Institute; Karolinska Institutet; Beckman Research Institute, City of Hope; Pacific Northwest Foundation","keywords":"Biology; Twist transcription factor; Interleukin 8; Transcription factor; Cell biology; Signal transduction; Cancer research; NFKB1; Autocrine signalling; Cancer cell; NF-κB; Cytokine; Cell culture; Immunology; Cancer; Gene; Nuclear protein; Genetics","score_opus":0.01838225853208751,"score_gpt":0.24745310449024888,"score_spread":0.22907084595816135,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1979050814","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98674935,0.0036986354,0.006092651,0.0001672016,0.00007230538,0.000045955803,0.00052008714,0.00018161786,0.0024721224],"genre_scores_gemma":[0.9932493,0.00089628366,0.0020204787,0.000046510933,0.000030041776,0.00003692873,0.00096197875,0.000031457967,0.0027269416],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998795,0.000017643531,0.0000065988006,0.000025736148,0.000024246465,0.000046402136],"domain_scores_gemma":[0.9998449,0.000013212578,0.000065734836,0.000010809285,0.000011278446,0.00005394581],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013734783,0.00059765024,0.00016009394,0.00023216273,0.0002216908,0.00019284636,0.00015753163,0.00016015364,0.0033629667],"category_scores_gemma":[0.00012378607,0.0001631805,0.0003994767,0.00010855085,0.00019255238,0.00023239039,0.00031243614,0.0005293823,0.0014011633],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014375043,0.000021731254,0.000691627,0.00008796309,0.000007149285,0.00011316064,0.000014707875,0.000064426036,0.9979225,0.0000922269,0.00011958428,0.00072127045],"study_design_scores_gemma":[0.000036365593,0.00027977146,0.010553204,0.000015900745,0.000023299652,0.0010134897,0.000043976066,0.0013278266,0.97903436,0.00011556388,0.007546633,0.000009459726],"about_ca_topic_score_codex":0.0001517509,"about_ca_topic_score_gemma":0.00024343007,"teacher_disagreement_score":0.0033629667,"about_ca_system_score_codex":0.00026427512,"about_ca_system_score_gemma":0.00014111797,"threshold_uncertainty_score":0.011250198},"labels":[],"label_agreement":null},{"id":"W1979588422","doi":"10.1186/1741-7007-8-94","title":"Regulation of lipid droplet turnover by ubiquitin ligases","year":2010,"lang":"en","type":"letter","venue":"BMC Biology","topic":"Lipid metabolism and biosynthesis","field":"Biochemistry, Genetics and Molecular Biology","cited_by":14,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"SickKids Foundation; Hospital for Sick Children; University of Toronto","funders":"","keywords":"Ubiquitin; Ubiquitin ligase; Biology; Ubiquitin-Protein Ligases; Cell biology; NEDD4; Lipid droplet; Signal transducing adaptor protein; Ubiquitins; Proteasome; Biochemistry; Signal transduction","score_opus":0.009636154548598695,"score_gpt":0.23076239950254576,"score_spread":0.22112624495394706,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1979588422","genre_codex":"commentary","genre_gemma":"commentary","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"commentary","genre_consensus":"commentary","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.39540327,0.094308294,0.008766231,0.40429202,0.016042266,0.00017125516,0.0008203716,0.00086337206,0.079332985],"genre_scores_gemma":[0.8375633,0.02569942,0.002858011,0.095994174,0.008783515,0.00015014739,0.00026386615,0.000092270166,0.028595386],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9996246,0.000079467645,0.000045449753,0.000058644015,0.00012430042,0.00006758426],"domain_scores_gemma":[0.9994978,0.00021305519,0.000078560624,0.000063682666,0.00007420314,0.0000727073],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005949609,0.0002968385,0.00033979042,0.00020364317,0.00035365956,0.0005230062,0.0003374649,0.002974279,0.0017242737],"category_scores_gemma":[0.0014154441,0.00018985514,0.0003151841,0.00013771713,0.00041504094,0.00041345423,0.00033332803,0.0015521153,0.0015543759],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0034688958,0.00031737195,0.019172475,0.0007517507,0.00016356252,0.0673445,0.0004078947,0.0012009906,0.38805118,0.03031012,0.3187825,0.17002873],"study_design_scores_gemma":[0.0010217594,0.0006951263,0.03296846,0.000276868,0.0000948225,0.09000446,0.0002763905,0.005390443,0.1956302,0.024989383,0.64853245,0.00011962077],"about_ca_topic_score_codex":0.000185348,"about_ca_topic_score_gemma":0.0003820265,"teacher_disagreement_score":0.002974279,"about_ca_system_score_codex":0.0011027887,"about_ca_system_score_gemma":0.00014830934,"threshold_uncertainty_score":0.0080013275},"labels":[],"label_agreement":null},{"id":"W1981765470","doi":"10.1186/1741-7007-5-26","title":"Horizontal transfer of a eukaryotic plastid-targeted protein gene to cyanobacteria","year":2007,"lang":"en","type":"article","venue":"BMC Biology","topic":"Protist diversity and phylogeny","field":"Biochemistry, Genetics and Molecular Biology","cited_by":31,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia; Canadian Institute for Advanced Research","funders":"Michael Smith Health Research BC; Natural Sciences and Engineering Research Council of Canada; Canadian Institute for Advanced Research","keywords":"Prochlorococcus; Biology; Plastid; Horizontal gene transfer; Synechococcus; Cyanobacteria; Gene; Eukaryote; Endosymbiosis; Genome; Genetics; Chloroplast; Bacteria","score_opus":0.011459488893668102,"score_gpt":0.2317396835290357,"score_spread":0.2202801946353676,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1981765470","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9872388,0.00067149894,0.007941084,0.00014980538,0.00006308537,0.000038507747,0.00033400333,0.00012141169,0.0034417321],"genre_scores_gemma":[0.9937216,0.00038814545,0.0035988868,0.000086691776,0.000014621037,0.000016380298,0.00059504446,0.00001937394,0.0015593147],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99990404,0.000005233249,0.00000708305,0.000029162422,0.000033764154,0.000020774905],"domain_scores_gemma":[0.99980813,0.00004342079,0.000044334654,0.00003189945,0.000028229346,0.00004399996],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00011737063,0.00022617719,0.00011078345,0.00025497942,0.00019257642,0.00021796569,0.00015636135,0.00030056536,0.0014575148],"category_scores_gemma":[0.00025539717,0.00009183604,0.00024108954,0.00023243493,0.00022648208,0.00020846189,0.00046464932,0.000471831,0.0005471298],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000044375793,0.000026890497,0.0052575935,0.00009256227,0.000010983528,0.0003745728,0.000074458345,0.0000467414,0.9881247,0.0005318186,0.000071019116,0.0053442325],"study_design_scores_gemma":[0.000043807726,0.0005411166,0.09403795,0.00008216159,0.00014045664,0.005634484,0.00038788852,0.0020398577,0.88178986,0.0008537341,0.014425578,0.000023099188],"about_ca_topic_score_codex":0.000596451,"about_ca_topic_score_gemma":0.00057987863,"teacher_disagreement_score":0.0014575148,"about_ca_system_score_codex":0.00042481435,"about_ca_system_score_gemma":0.00040548237,"threshold_uncertainty_score":0.0048758388},"labels":[],"label_agreement":null},{"id":"W1983305217","doi":"10.1186/s12915-014-0107-z","title":"The Lingulodinium circadian system lacks rhythmic changes in transcript abundance","year":2014,"lang":"en","type":"article","venue":"BMC Biology","topic":"Circadian rhythm and melatonin","field":"Neuroscience","cited_by":49,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University and Génome Québec Innovation Centre; Espace pour la vie; Université de Sherbrooke; Université de Montréal","funders":"","keywords":"Biology; Circadian rhythm; Circadian clock; Transcription (linguistics); Timeless; Zeitgeber; CLOCK; Oscillating gene; Gene; Bacterial circadian rhythms; Genetics; Cell biology; Neuroscience","score_opus":0.027918583312953046,"score_gpt":0.25698455317438834,"score_spread":0.2290659698614353,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1983305217","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9922937,0.0005192561,0.0030944683,0.000061721934,0.000013757193,0.00001066164,0.0019747554,0.00013206445,0.0018996282],"genre_scores_gemma":[0.99165994,0.00023328498,0.0024099862,0.00009363308,0.000004703255,0.00003532245,0.0039545787,0.00005948968,0.0015491005],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99989176,0.000004426187,0.000012009179,0.000049763326,0.000023181434,0.00001888392],"domain_scores_gemma":[0.99972194,0.00004466438,0.00009894221,0.00005694689,0.000037581063,0.00003995077],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00008341725,0.00020080974,0.0001906435,0.00018228542,0.00021054914,0.00037281908,0.00015056194,0.00019808182,0.0006942195],"category_scores_gemma":[0.00023430353,0.00015612104,0.0001934908,0.00023363363,0.00020058182,0.00013019683,0.0003204861,0.00021681367,0.00031617426],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006147832,0.000003773614,0.0025093418,0.00003748094,0.0000032858661,0.000026859883,0.000019413392,0.000052823634,0.9954566,0.000046714336,0.000036059162,0.001746165],"study_design_scores_gemma":[0.000029543051,0.00040482244,0.37352413,0.00003510724,0.00009324872,0.0009683617,0.00023955334,0.0024478438,0.6028025,0.0002392564,0.01918065,0.000034994457],"about_ca_topic_score_codex":0.0018663591,"about_ca_topic_score_gemma":0.003353479,"teacher_disagreement_score":0.0018663591,"about_ca_system_score_codex":0.00043601924,"about_ca_system_score_gemma":0.0003399346,"threshold_uncertainty_score":0.0037109256},"labels":[],"label_agreement":null},{"id":"W1985244199","doi":"10.1186/1741-7007-10-35","title":"Evolving a photosynthetic organelle","year":2012,"lang":"en","type":"article","venue":"BMC Biology","topic":"Protist diversity and phylogeny","field":"Biochemistry, Genetics and Molecular Biology","cited_by":43,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University; Canadian Institute for Advanced Research","funders":"","keywords":"Plastid; Biology; Endosymbiosis; Photosynthesis; Eukaryote; Organelle; Chloroplast; Evolutionary biology; Cyanobacteria; Algae; Organism; Botany; Genome; Cell biology; Gene; Genetics","score_opus":0.01793444200081568,"score_gpt":0.24439330964073738,"score_spread":0.2264588676399217,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1985244199","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.6591154,0.119846314,0.10770471,0.020086631,0.0028747944,0.000116004674,0.0009183698,0.0011701317,0.08816763],"genre_scores_gemma":[0.8562157,0.041377418,0.06557987,0.005042577,0.00051104225,0.00006267326,0.0008704786,0.00025412536,0.030086078],"study_design_codex":"bench_or_experimental","study_design_gemma":"theoretical_or_conceptual","domain_scores_codex":[0.99956113,0.000038213137,0.00002237847,0.00017502048,0.00012574733,0.00007756465],"domain_scores_gemma":[0.99966645,0.000035775858,0.000049182378,0.000056950685,0.00008958968,0.00010197184],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008755908,0.00027036108,0.00033141446,0.00035626927,0.00169716,0.0021600185,0.00074488844,0.0020152885,0.002128575],"category_scores_gemma":[0.00064146984,0.00025861422,0.0003159347,0.00038996132,0.001863864,0.0036928176,0.0026785757,0.0020609628,0.0021418475],"study_design_candidate":"theoretical_or_conceptual","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00020641628,0.00006319799,0.007264603,0.0008842538,0.000045590452,0.0008634848,0.0026993258,0.0008570764,0.6090075,0.2181603,0.00678994,0.15315835],"study_design_scores_gemma":[0.00002349566,0.0003590726,0.014726666,0.00044233602,0.00006400306,0.0028310248,0.0015326913,0.0020125825,0.10806788,0.05532137,0.8144986,0.000120245524],"about_ca_topic_score_codex":0.00094268145,"about_ca_topic_score_gemma":0.0008135011,"teacher_disagreement_score":0.0021600185,"about_ca_system_score_codex":0.0019696567,"about_ca_system_score_gemma":0.0012871658,"threshold_uncertainty_score":0.014290869},"labels":[],"label_agreement":null},{"id":"W1986791520","doi":"10.1186/1741-7007-10-84","title":"A spruce gene map infers ancient plant genome reshuffling and subsequent slow evolution in the gymnosperm lineage leading to extant conifers","year":2012,"lang":"en","type":"article","venue":"BMC Biology","topic":"Genomics and Phylogenetic Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":109,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Centre de Recherche Industrielle du Québec; Natural Resources Canada; Canadian Forest Service; Université Laval","funders":"Centre Hospitalier Universitaire de Québec; Génome Québec; Genome Canada; McGill University; Université Laval","keywords":"Gymnosperm; Biology; Genome; Plant evolution; Lineage (genetic); Evolutionary biology; Synteny; Phylogenetics; Genome size; Phylogenetic tree; Extant taxon; Gene; Gene family; Phylogenomics; Botany; Genetics; Clade","score_opus":0.026653927945789323,"score_gpt":0.2598824527137574,"score_spread":0.23322852476796804,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1986791520","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9950919,0.0002453695,0.0032730647,0.000011169709,0.0000015794845,0.0000055329315,0.0006311681,0.000061610954,0.00067858165],"genre_scores_gemma":[0.99253196,0.00018845922,0.004701184,0.0000103908515,0.0000032063247,0.000007977578,0.0020221577,0.000018706154,0.0005159595],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9999503,0.0000031785166,0.000002071502,0.000027011465,0.000007158991,0.000010320771],"domain_scores_gemma":[0.99982435,0.000072987175,0.0000388651,0.000015752012,0.000019189338,0.00002889782],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013674448,0.00020993553,0.00016026378,0.0007693798,0.00030272768,0.00038450627,0.0001800443,0.00016054,0.0008209414],"category_scores_gemma":[0.0002739198,0.000099143836,0.0002663006,0.00047933857,0.00017975665,0.000115034025,0.0002048164,0.0002654866,0.00024644894],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00077359757,0.00007637756,0.24047154,0.00021381429,0.000094265044,0.00058201124,0.00086686434,0.0049717086,0.7124878,0.0010334924,0.00029722965,0.038131285],"study_design_scores_gemma":[0.00001284947,0.00016072465,0.9582164,0.000037796453,0.00009176706,0.00057688775,0.00042133598,0.0112387715,0.024967514,0.0007847117,0.003479664,0.000011635772],"about_ca_topic_score_codex":0.004297598,"about_ca_topic_score_gemma":0.007938156,"teacher_disagreement_score":0.004297598,"about_ca_system_score_codex":0.00024399959,"about_ca_system_score_gemma":0.0002872512,"threshold_uncertainty_score":0.00854516},"labels":[],"label_agreement":null},{"id":"W1988292410","doi":"10.1186/1741-7007-9-85","title":"Putting the pH into phosphatidic acid signaling","year":2011,"lang":"en","type":"review","venue":"BMC Biology","topic":"ATP Synthase and ATPases Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":147,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"Natural Sciences and Engineering Research Council of Canada; British Columbia Knowledge Development Fund; Michael Smith Health Research BC; Canadian Institutes of Health Research; Tula Foundation","keywords":"Phosphatidic acid; Biology; Biochemistry; Signal transduction; Cell signaling; Intracellular; Cell biology; Phospholipid; Membrane","score_opus":0.0883085261292771,"score_gpt":0.3818045900613013,"score_spread":0.2934960639320242,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1988292410","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000116099254,0.997373,0.00017326757,0.00059482513,0.00047845434,0.0000021415551,0.000009477829,0.000010503914,0.0012422398],"genre_scores_gemma":[0.0007692704,0.9972946,0.00015561696,0.00042620287,0.00035535678,0.0000042009974,0.000020299558,0.0000021298429,0.0009723831],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99981743,0.000035028337,0.0000242025,0.00003299419,0.00006703077,0.000023354829],"domain_scores_gemma":[0.99975795,0.00010731135,0.0000262331,0.0000132476625,0.00006438972,0.000030956315],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005918065,0.0008852548,0.0012710122,0.0017308664,0.00032534183,0.0012192798,0.0011446701,0.0018757194,0.0035657876],"category_scores_gemma":[0.00070448144,0.00040720843,0.00039216084,0.0017418448,0.001142719,0.0029246036,0.0012314199,0.0029736045,0.0040296596],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000126865,0.00005397704,0.00011184068,0.011020676,0.000066033535,0.00038391983,0.00011430122,0.00045322118,0.006617696,0.015109072,0.048349194,0.91759324],"study_design_scores_gemma":[0.000012243504,0.00004095196,0.00025031294,0.0011602447,0.00002435146,0.0005488218,0.00004181143,0.00005198383,0.00070595427,0.0038334897,0.99331856,0.0000112393545],"about_ca_topic_score_codex":0.0008468804,"about_ca_topic_score_gemma":0.0010462876,"teacher_disagreement_score":0.0035657876,"about_ca_system_score_codex":0.0009882988,"about_ca_system_score_gemma":0.00083300524,"threshold_uncertainty_score":0.011928737},"labels":[],"label_agreement":null},{"id":"W1988519699","doi":"10.1186/1741-7007-8-133","title":"Functional diversity in the color vision of cichlid fishes","year":2010,"lang":"en","type":"article","venue":"BMC Biology","topic":"Retinal Development and Disorders","field":"Biochemistry, Genetics and Molecular Biology","cited_by":81,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Queen's University","funders":"Natural Sciences and Engineering Research Council of Canada; Ontario Innovation Trust","keywords":"Spectral sensitivity; Opsin; Biology; Color vision; Cichlid; Evolutionary biology; Cone (formal languages); Trichromacy; Zoology; Genetics; Rhodopsin; Optics; Retinal; Fish <Actinopterygii>; Wavelength; Botany","score_opus":0.018144088032580635,"score_gpt":0.25503444497394073,"score_spread":0.2368903569413601,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1988519699","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9989219,0.00014394407,0.0003869797,0.000012561377,0.0000010151758,0.000003989202,0.00009285568,0.0000066268594,0.00043024097],"genre_scores_gemma":[0.99920374,0.000051814714,0.0004962987,0.000010821512,0.0000013622565,0.0000070088026,0.00011629784,0.0000033510757,0.00010936659],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9998437,0.000017882938,0.000013661464,0.000057913152,0.000046317047,0.00002040913],"domain_scores_gemma":[0.9994986,0.00018856661,0.00009388048,0.000057605623,0.00010499998,0.000056403358],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00039005576,0.00023397383,0.00021536811,0.0009207018,0.00039893956,0.00037979023,0.00032870396,0.0003332578,0.0008099917],"category_scores_gemma":[0.0007126755,0.0001612743,0.00020513752,0.0003796981,0.000589785,0.00023110374,0.00049171457,0.00022377238,0.000073367395],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003879299,0.00007438125,0.3353132,0.00029820562,0.00019724628,0.00035726532,0.0011846927,0.0033481235,0.63594365,0.0009951702,0.00026473374,0.021635378],"study_design_scores_gemma":[0.0000031426034,0.000045460885,0.994445,0.000006176353,0.000022876788,0.00021869078,0.0001355589,0.0017406682,0.0028915182,0.0002762036,0.00020623245,0.000008371226],"about_ca_topic_score_codex":0.0028143548,"about_ca_topic_score_gemma":0.0042088456,"teacher_disagreement_score":0.0028143548,"about_ca_system_score_codex":0.00046528937,"about_ca_system_score_gemma":0.00029293404,"threshold_uncertainty_score":0.0055959225},"labels":[],"label_agreement":null},{"id":"W1991358243","doi":"10.1186/1741-7007-9-22","title":"Learning to live together: mutualism between self-splicing introns and their hosts","year":2011,"lang":"en","type":"review","venue":"BMC Biology","topic":"RNA and protein synthesis mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":85,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Western University","funders":"National Institute of General Medical Sciences; Canadian Institutes of Health Research; National Institutes of Health","keywords":"Biology; Group II intron; Ribozyme; Intron; RNA splicing; Genetics; Gene; RNA; Mobile genetic elements; Mutualism (biology); Genome; Group I catalytic intron; Computational biology; Evolutionary biology; Ecology","score_opus":0.04059236738008435,"score_gpt":0.2999907153819743,"score_spread":0.25939834800188993,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1991358243","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00009738123,0.99825484,0.00020290262,0.00034696283,0.00021308429,0.000001976416,0.0000086632945,0.0000069554253,0.00086722797],"genre_scores_gemma":[0.000724222,0.9979031,0.00018937429,0.00018167747,0.00023461065,0.000005039195,0.000017164115,0.0000018430103,0.0007430173],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9998159,0.000039671355,0.00002196048,0.000044174452,0.000059608872,0.000018801664],"domain_scores_gemma":[0.9995858,0.00021653778,0.0000652335,0.00001270748,0.000073396746,0.00004639806],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00063255575,0.0011480859,0.001491442,0.0016241402,0.00034427442,0.0013494708,0.0012173349,0.0022075872,0.0028113027],"category_scores_gemma":[0.00079748227,0.00031935913,0.00030481926,0.0018668168,0.0009902999,0.0023006334,0.0008566052,0.001697543,0.0026559315],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000054452787,0.000042620006,0.00018472546,0.0095840385,0.000067130015,0.00023826248,0.00011220472,0.00045386783,0.0014658524,0.007855497,0.033165015,0.94677633],"study_design_scores_gemma":[0.0000100235375,0.00004732998,0.000608021,0.002483928,0.00005212285,0.0012571038,0.0001006214,0.00008673172,0.0004152995,0.003645917,0.99127394,0.000019049216],"about_ca_topic_score_codex":0.000897666,"about_ca_topic_score_gemma":0.0013525686,"teacher_disagreement_score":0.0028113027,"about_ca_system_score_codex":0.00091838173,"about_ca_system_score_gemma":0.0009799906,"threshold_uncertainty_score":0.0094047785},"labels":[],"label_agreement":null},{"id":"W2000923166","doi":"10.1186/1741-7007-8-123","title":"Q&amp;A: Antibiotic resistance: where does it come from and what can we do about it?","year":2010,"lang":"en","type":"article","venue":"BMC Biology","topic":"Antibiotic Resistance in Bacteria","field":"Biochemistry, Genetics and Molecular Biology","cited_by":184,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"Canadian Institutes of Health Research","keywords":"Biology; Antibiotic resistance; Antibiotics; Resistance (ecology); Microbiology; Genetics; Ecology","score_opus":0.01211836852059384,"score_gpt":0.2710404413329673,"score_spread":0.25892207281237345,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2000923166","genre_codex":"commentary","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0003748014,0.04490783,0.0023482596,0.8992821,0.02952522,0.000052134917,0.00030268257,0.0003464765,0.02286043],"genre_scores_gemma":[0.016351143,0.1312321,0.009827303,0.68205965,0.055262413,0.0002459294,0.0008349897,0.0007542115,0.10343225],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9919872,0.0028584406,0.0007805775,0.00082601164,0.0029438243,0.0006039065],"domain_scores_gemma":[0.9412825,0.027925665,0.0035919836,0.002240807,0.017427556,0.0075315586],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.011147131,0.0013742461,0.001969235,0.002098112,0.00345617,0.013634816,0.0025815046,0.014458414,0.06458379],"category_scores_gemma":[0.043513887,0.00065088377,0.00097432325,0.0025480082,0.013098661,0.01789308,0.0039765527,0.01374055,0.046278115],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006375438,0.00003651813,0.00048121696,0.001049762,0.000015226624,0.000109145956,0.0002732033,0.00005226732,0.00040291052,0.019697584,0.86208457,0.11573386],"study_design_scores_gemma":[0.000028057182,0.000074522475,0.00081742136,0.0014592471,0.000015027986,0.00034948625,0.000651974,0.00017940275,0.0003268733,0.042721074,0.95332545,0.000051456787],"about_ca_topic_score_codex":0.0049505243,"about_ca_topic_score_gemma":0.00635995,"teacher_disagreement_score":0.06458379,"about_ca_system_score_codex":0.004760736,"about_ca_system_score_gemma":0.009232995,"threshold_uncertainty_score":0.21605432},"labels":[],"label_agreement":null},{"id":"W2004275075","doi":"10.1186/1741-7007-5-38","title":"Association with the origin recognition complex suggests a novel role for histone acetyltransferase Hat1p/Hat2p","year":2007,"lang":"en","type":"article","venue":"BMC Biology","topic":"Genomics and Chromatin Dynamics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":49,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"National Institute of General Medical Sciences; Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research","keywords":"Biology; Histone acetyltransferase; Association (psychology); Genetics; Histone; Computational biology; Acetyltransferase; Acetylation; Evolutionary biology; Gene","score_opus":0.021390859603069044,"score_gpt":0.27282242803497325,"score_spread":0.25143156843190423,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2004275075","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9365593,0.009725843,0.04327369,0.0007994944,0.00022339313,0.00006530117,0.0011453222,0.0006785311,0.0075291437],"genre_scores_gemma":[0.9858354,0.0007885715,0.006527028,0.000104783205,0.000048255344,0.00002319861,0.0019005922,0.000045244546,0.004726923],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99975806,0.000012502784,0.000013896018,0.00010862561,0.000058120037,0.000048745776],"domain_scores_gemma":[0.9997652,0.000025199048,0.000060762115,0.00003279562,0.000045466295,0.00007062248],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00020630678,0.00078390026,0.00027259893,0.0002955632,0.00039525967,0.00085971365,0.0006225841,0.000572072,0.006283417],"category_scores_gemma":[0.00025294238,0.00032323983,0.0005805428,0.00022489403,0.00029639082,0.0005933687,0.0006495527,0.00081826333,0.0015931505],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00027461365,0.00006811622,0.0075771217,0.0002020609,0.00008412964,0.000752012,0.00003881845,0.00017699019,0.9843776,0.00082106085,0.00044205933,0.005185408],"study_design_scores_gemma":[0.00004540724,0.00023932419,0.06730443,0.000030047122,0.00013419341,0.003105873,0.00007293987,0.005234307,0.90589815,0.00077646377,0.01713394,0.000024886502],"about_ca_topic_score_codex":0.0007586267,"about_ca_topic_score_gemma":0.000940274,"teacher_disagreement_score":0.006283417,"about_ca_system_score_codex":0.0006759775,"about_ca_system_score_gemma":0.00031637386,"threshold_uncertainty_score":0.021020055},"labels":[],"label_agreement":null},{"id":"W2007375915","doi":"10.1186/1741-7007-8-26","title":"Molecular evidence for increased regulatory conservation during metamorphosis, and against deleterious cascading effects of hybrid breakdown in Drosophila","year":2010,"lang":"en","type":"article","venue":"BMC Biology","topic":"Developmental Biology and Gene Regulation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":26,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Biology; Gene; Drosophila melanogaster; Genetics; Developmental biology; Gene expression; Evolutionary biology; Regulation of gene expression; Gene expression profiling; Hybrid; Metamorphosis; Larva; Ecology","score_opus":0.00948702368215744,"score_gpt":0.2544529703211998,"score_spread":0.24496594663904234,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2007375915","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9979614,0.0006060005,0.00068132835,0.000020268122,0.0000028857169,0.0000034792527,0.00013165188,0.000023276374,0.00056978205],"genre_scores_gemma":[0.99830973,0.00017405149,0.00063631457,0.00002993872,0.0000034346276,0.0000070373644,0.00030777088,0.0000075589087,0.0005241012],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999262,0.000004235752,0.000006579069,0.000033335076,0.0000162969,0.000013350426],"domain_scores_gemma":[0.9997776,0.000035643334,0.0000932713,0.000028348753,0.00002003917,0.000045086366],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00008659728,0.00016454671,0.00009366593,0.00027713407,0.00014098562,0.00019762547,0.000195535,0.00019923708,0.00093732757],"category_scores_gemma":[0.00011760544,0.000110775,0.00017153213,0.00009650445,0.00020596261,0.000168738,0.00023191849,0.00031859434,0.00015045633],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000675128,0.000007112812,0.00458438,0.000024046803,0.0000074162695,0.00009255298,0.000023808638,0.000030503305,0.993845,0.000086001404,0.000014271232,0.0012174118],"study_design_scores_gemma":[0.000018833574,0.0003810949,0.7618084,0.000013128884,0.000049277074,0.0020157814,0.00013691628,0.0008277355,0.2329575,0.0002227926,0.0015577836,0.000010815748],"about_ca_topic_score_codex":0.0003004768,"about_ca_topic_score_gemma":0.00074126147,"teacher_disagreement_score":0.00093732757,"about_ca_system_score_codex":0.00016952533,"about_ca_system_score_gemma":0.00007280488,"threshold_uncertainty_score":0.0031356215},"labels":[],"label_agreement":null},{"id":"W2009963071","doi":"10.1186/1741-7007-11-106","title":"Non-coding-regulatory regions of human brain genes delineated by bacterial artificial chromosome knock-in mice","year":2013,"lang":"en","type":"article","venue":"BMC Biology","topic":"Bacterial Genetics and Biotechnology","field":"Biochemistry, Genetics and Molecular Biology","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canada's Michael Smith Genome Sciences Centre; Simon Fraser University; Child and Family Research Institute; University of British Columbia","funders":"Genome British Columbia; Child and Family Research Institute; Genome Canada; GlaxoSmithKline","keywords":"Biology; Gene; Gene knockin; Human genome; Genetics; Bacterial artificial chromosome; Locus (genetics); Genome; Regulation of gene expression; Regulatory sequence; Computational biology","score_opus":0.014523719946466958,"score_gpt":0.2483135449227368,"score_spread":0.23378982497626985,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2009963071","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9025611,0.004727659,0.08240233,0.0005653027,0.00019532704,0.0004597228,0.003988753,0.0010361366,0.004063681],"genre_scores_gemma":[0.91784585,0.0041228523,0.06468333,0.00031033947,0.000048773574,0.0007250015,0.00548387,0.0004971333,0.006282718],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99933237,0.000117746735,0.0001089589,0.00019336953,0.0001645607,0.000082962026],"domain_scores_gemma":[0.9995875,0.0001227778,0.00015805432,0.00006267707,0.000023143637,0.000045984758],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005698226,0.0008252182,0.00041004232,0.00091137976,0.00025495025,0.0005499282,0.00066177285,0.0006736253,0.0021035632],"category_scores_gemma":[0.00028725227,0.00046956047,0.00057505607,0.0003472771,0.00062002655,0.00027389292,0.00040741617,0.001151829,0.0010530845],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013675659,0.000041418178,0.00015871745,0.000049553724,0.00001440133,0.00013378357,0.00002947449,0.00019205271,0.99701047,0.00053396454,0.00008248418,0.0016169228],"study_design_scores_gemma":[0.00007493629,0.0002692344,0.002138039,0.000024985184,0.00006769653,0.00097362493,0.00003552947,0.0021787034,0.98498636,0.00024988916,0.008989762,0.000011151338],"about_ca_topic_score_codex":0.00043788378,"about_ca_topic_score_gemma":0.0008772793,"teacher_disagreement_score":0.0021035632,"about_ca_system_score_codex":0.000400638,"about_ca_system_score_gemma":0.00037555097,"threshold_uncertainty_score":0.007037163},"labels":[],"label_agreement":null},{"id":"W2012109938","doi":"10.1186/1741-7007-12-44","title":"Molecular dissection of Wnt3a-Frizzled8 interaction reveals essential and modulatory determinants of Wnt signaling activity","year":2014,"lang":"en","type":"article","venue":"BMC Biology","topic":"Wnt/β-catenin signaling in development and cancer","field":"Biochemistry, Genetics and Molecular Biology","cited_by":41,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba","funders":"Deutsche Forschungsgemeinschaft; Universität Heidelberg; Manitoba Health Research Council; Canadian Institutes of Health Research; Heidelberger Akademie der Wissenschaften","keywords":"Wnt signaling pathway; Biology; WNT3A; LRP5; Cell biology; LRP6; Binding site; Frizzled; Signal transduction; Plasma protein binding; Biochemistry","score_opus":0.010942025592706083,"score_gpt":0.2778720984856192,"score_spread":0.26693007289291315,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2012109938","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9976786,0.0004274514,0.0012439461,0.000036891684,0.000002953076,0.000006547494,0.0001754211,0.000022822705,0.0004053879],"genre_scores_gemma":[0.996819,0.000267485,0.0020176074,0.00001904277,0.0000026677321,0.000011393015,0.00033935436,0.0000110141555,0.0005124244],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999546,0.0000066804687,0.00000382961,0.000010986702,0.000012416365,0.000011596238],"domain_scores_gemma":[0.9999331,0.000013805899,0.000029461376,0.0000053689846,0.0000044231715,0.000013901725],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00005859858,0.00023344703,0.000101170735,0.00013312747,0.000111927795,0.00012432349,0.00020198013,0.00017016633,0.0009716034],"category_scores_gemma":[0.0000726934,0.00009495436,0.00019171352,0.00009574065,0.00015396427,0.000088798755,0.00010242782,0.00028850685,0.00032460943],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000043898268,0.0000063713455,0.0001596395,0.000010649442,0.0000018098015,0.000026378391,0.0000029696328,0.00004001644,0.99940276,0.000056896795,0.0000065854156,0.00024215903],"study_design_scores_gemma":[0.000012416163,0.000069767186,0.008407829,0.00000446385,0.000011541635,0.0002602537,0.0000104834135,0.0013384006,0.9887072,0.000057861875,0.0011171298,0.0000026721934],"about_ca_topic_score_codex":0.0006459182,"about_ca_topic_score_gemma":0.0010583985,"teacher_disagreement_score":0.0009716034,"about_ca_system_score_codex":0.00046675594,"about_ca_system_score_gemma":0.00014804173,"threshold_uncertainty_score":0.0033864975},"labels":[],"label_agreement":null},{"id":"W2013056531","doi":"10.1186/1741-7007-11-90","title":"Transcription of a protein-coding gene on B chromosomes of the Siberian roe deer (Capreolus pygargus)","year":2013,"lang":"en","type":"article","venue":"BMC Biology","topic":"Chromosomal and Genetic Variations","field":"Agricultural and Biological Sciences","cited_by":68,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"University of Cambridge; Siberian Branch, Russian Academy of Sciences; Institute of Molecular and Cell Biology; Connaught Fund; Russian Foundation for Basic Research; Wellcome Trust","keywords":"Biology; B chromosome; Roe deer; Capreolus; Gene; Genetics; Karyotype; Chromosome; Ploidy; Complementary DNA; Molecular biology","score_opus":0.023310153996750873,"score_gpt":0.2087940371325538,"score_spread":0.1854838831358029,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2013056531","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9984602,0.00030412522,0.00051521335,0.000015291187,0.0000036574395,0.0000072078174,0.00027670877,0.000011476482,0.00040608834],"genre_scores_gemma":[0.99469006,0.00026573474,0.0017907269,0.0000392124,0.000006582086,0.000019023479,0.001577135,0.000010596585,0.0016009357],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.999946,0.000003807088,0.000002846492,0.000025332452,0.000010912853,0.00001100899],"domain_scores_gemma":[0.9998841,0.000026272715,0.000037600566,0.000008995214,0.000014736056,0.000028300177],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00006828774,0.00023418984,0.00009688971,0.00046157063,0.00021429764,0.00018523865,0.00013919205,0.00026132457,0.0008923656],"category_scores_gemma":[0.00011006711,0.000109662826,0.0001348501,0.00022526918,0.0002576274,0.0000965028,0.00014073741,0.0002395306,0.00035752152],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000064402775,0.000009352645,0.0026552218,0.000020776362,0.0000036566953,0.0001300358,0.000053680968,0.00001440463,0.99620664,0.000021830598,0.000015172807,0.0008048114],"study_design_scores_gemma":[0.00004291662,0.00062753784,0.61612695,0.000039931496,0.000073099494,0.0039679357,0.0006898438,0.0010091931,0.37313595,0.00015875843,0.004112543,0.000015322516],"about_ca_topic_score_codex":0.0016850461,"about_ca_topic_score_gemma":0.0019406427,"teacher_disagreement_score":0.0016850461,"about_ca_system_score_codex":0.00016932645,"about_ca_system_score_gemma":0.00013104518,"threshold_uncertainty_score":0.0033504367},"labels":[],"label_agreement":null},{"id":"W2015751822","doi":"10.1186/1741-7007-10-21","title":"A novel approach for finding ring species: look for barriers rather than rings","year":2012,"lang":"en","type":"letter","venue":"BMC Biology","topic":"Genetic diversity and population structure","field":"Biochemistry, Genetics and Molecular Biology","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Biology; Focus (optics); Ring (chemistry); Evolutionary biology; Ecology","score_opus":0.047895664404502034,"score_gpt":0.26115905190978383,"score_spread":0.2132633875052818,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2015751822","genre_codex":"commentary","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0015728546,0.005384457,0.004754933,0.9683589,0.01711614,0.000042831056,0.00006753944,0.00011335153,0.002588992],"genre_scores_gemma":[0.026844177,0.00735323,0.0134885805,0.885232,0.058236614,0.00017581128,0.00006784667,0.00007368381,0.008528164],"study_design_codex":"not_applicable","study_design_gemma":"theoretical_or_conceptual","domain_scores_codex":[0.9971957,0.000968376,0.00045972332,0.00060430984,0.00053392147,0.00023806411],"domain_scores_gemma":[0.98941857,0.0068484927,0.00053413893,0.0006939021,0.0016217548,0.00088307087],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0051937522,0.0012714337,0.0016335999,0.0010788388,0.002665382,0.0028081082,0.0032816634,0.033723593,0.0038578],"category_scores_gemma":[0.019051826,0.0008428588,0.0012575112,0.00051729096,0.006184945,0.0077569094,0.0018016814,0.038435675,0.0054715215],"study_design_candidate":"theoretical_or_conceptual","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00053379714,0.00021721881,0.0037784318,0.0007670013,0.00020601254,0.019693516,0.0011142899,0.00048509156,0.005455719,0.038668886,0.82818615,0.100893855],"study_design_scores_gemma":[0.00070933107,0.00043831678,0.0034986231,0.0005437702,0.00017086012,0.051356513,0.001719255,0.0031222655,0.004623642,0.18481024,0.74868417,0.0003229801],"about_ca_topic_score_codex":0.0010606928,"about_ca_topic_score_gemma":0.001587618,"teacher_disagreement_score":0.033723593,"about_ca_system_score_codex":0.0024008271,"about_ca_system_score_gemma":0.0010036133,"threshold_uncertainty_score":0.027467549},"labels":[],"label_agreement":null},{"id":"W2016706421","doi":"10.1186/1741-7007-8-147","title":"Gene transfer: anything goes in plant mitochondria","year":2010,"lang":"en","type":"article","venue":"BMC Biology","topic":"Photosynthetic Processes and Mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":49,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University; Canadian Institute for Advanced Research","funders":"","keywords":"Biology; Horizontal gene transfer; Gene; Mitochondrial DNA; Genetics; Gene transfer; Mitochondrion; DNA; Gene conversion; Computational biology; Evolutionary biology; Genome","score_opus":0.009590823108438276,"score_gpt":0.2390866338192518,"score_spread":0.2294958107108135,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2016706421","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.38275504,0.19454136,0.101889774,0.2156152,0.0100246575,0.00008688376,0.0005849177,0.0020245197,0.09247768],"genre_scores_gemma":[0.8989843,0.042308778,0.011071945,0.012597142,0.0022560006,0.000058532107,0.00026614286,0.00020007417,0.032256987],"study_design_codex":"theoretical_or_conceptual","study_design_gemma":"theoretical_or_conceptual","domain_scores_codex":[0.99964464,0.000064592576,0.000012880416,0.00011756133,0.00010407433,0.000056279307],"domain_scores_gemma":[0.99957055,0.0001245809,0.00004708793,0.00013958973,0.00004355478,0.000074593685],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007374349,0.00023636919,0.00037173773,0.00028936742,0.001295166,0.0019575749,0.0006929378,0.0025752406,0.004229183],"category_scores_gemma":[0.001461359,0.00015440342,0.00032572914,0.00034670136,0.0035720228,0.007088088,0.0015824354,0.0020285405,0.0022680773],"study_design_candidate":"theoretical_or_conceptual","study_design_consensus":"theoretical_or_conceptual","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003106687,0.00009240073,0.0046569942,0.0014004466,0.000103932936,0.0021821135,0.002974527,0.0006299482,0.23836227,0.5414128,0.0129506355,0.19492327],"study_design_scores_gemma":[0.00006308391,0.00042526834,0.0054165428,0.00047233002,0.00009835649,0.0034199473,0.001956408,0.0006097256,0.06592172,0.5994973,0.32202336,0.00009592518],"about_ca_topic_score_codex":0.00034161308,"about_ca_topic_score_gemma":0.00024833734,"teacher_disagreement_score":0.004229183,"about_ca_system_score_codex":0.0007704646,"about_ca_system_score_gemma":0.0004671853,"threshold_uncertainty_score":0.0141480565},"labels":[],"label_agreement":null},{"id":"W2017867335","doi":"10.1186/1741-7007-12-47","title":"Neuronal deletion of GSK3β increases microtubule speed in the growth cone and enhances axon regeneration via CRMP-2 and independently of MAP1B and CLASP2","year":2014,"lang":"en","type":"article","venue":"BMC Biology","topic":"Nerve injury and regeneration","field":"Neuroscience","cited_by":86,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Lunenfeld-Tanenbaum Research Institute; University of Toronto; Mount Sinai Hospital","funders":"Fundação para a Ciência e a Tecnologia; Menzies Centre for Australian Studies, King's College London, University of London; National Institute of General Medical Sciences; Medical Research Council; Canadian Institutes of Health Research; Biotechnology and Biological Sciences Research Council; Programa Operacional Temático Factores de Competitividade; King's College London; University of Dundee; International Business Machines Corporation","keywords":"Growth cone; Biology; Microtubule; Cell biology; Neurite; Axon; GSK-3; Regeneration (biology); Microtubule-associated protein; Neuroscience; Kinase; Biochemistry; In vitro","score_opus":0.02227802735732458,"score_gpt":0.25404587554964164,"score_spread":0.23176784819231705,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2017867335","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99644274,0.00076094276,0.00089577003,0.00009405597,0.00003069887,0.000027851163,0.0006652076,0.00012910033,0.00095368223],"genre_scores_gemma":[0.9937185,0.0007133712,0.0015540026,0.000052951218,0.000009158827,0.00010008628,0.00081520836,0.00005665585,0.0029800634],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998647,0.000010817676,0.000020284055,0.00003023457,0.00003563607,0.000038287424],"domain_scores_gemma":[0.99977547,0.00001373266,0.00008402476,0.000015700702,0.000012767245,0.000098320656],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013010761,0.0007437422,0.0002823744,0.0004454262,0.00018757266,0.00029234926,0.00027138894,0.00027076298,0.0026112713],"category_scores_gemma":[0.00009295489,0.00022856987,0.00046230425,0.00020831385,0.000433417,0.0002269012,0.00023553544,0.0008237267,0.0004590794],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00017338767,0.000029443467,0.000119000666,0.0000367492,0.000006503703,0.000033496028,0.0000072528937,0.000028946684,0.9992157,0.000033370914,0.000029813615,0.00028627797],"study_design_scores_gemma":[0.000052102187,0.0003484569,0.003638148,0.000010311153,0.000023209524,0.00014190587,0.000024840769,0.0004725691,0.9946321,0.000025375053,0.00062708696,0.0000039132615],"about_ca_topic_score_codex":0.0011897354,"about_ca_topic_score_gemma":0.0027161697,"teacher_disagreement_score":0.0026112713,"about_ca_system_score_codex":0.000562004,"about_ca_system_score_gemma":0.00045503234,"threshold_uncertainty_score":0.008735597},"labels":[],"label_agreement":null},{"id":"W2024775087","doi":"10.1186/1741-7007-7-48","title":"Induction of protein body formation in plant leaves by elastin-like polypeptide fusions","year":2009,"lang":"en","type":"article","venue":"BMC Biology","topic":"Biochemical and Structural Characterization","field":"Biochemistry, Genetics and Molecular Biology","cited_by":100,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Agriculture and Agri-Food Canada; Vineland Research and Innovation Centre; Western University","funders":"Agriculture and Agri-Food Canada; Natural Sciences and Engineering Research Council of Canada; Academy of Finland","keywords":"Endoplasmic reticulum; Elastin; Biology; Recombinant DNA; Cell biology; Biochemistry; Gene","score_opus":0.009292433168454612,"score_gpt":0.22737594656628032,"score_spread":0.21808351339782572,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2024775087","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97758263,0.0011175373,0.018729502,0.00011625586,0.000031136005,0.00008212247,0.0005684333,0.0003503255,0.0014220648],"genre_scores_gemma":[0.98240227,0.0005105608,0.012382904,0.000095659925,0.000009381054,0.00008911802,0.0012561873,0.00012274768,0.0031312231],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998734,0.000019478099,0.000012056006,0.00004266756,0.000029522784,0.000022835422],"domain_scores_gemma":[0.99980253,0.000053240878,0.00006174071,0.000023086819,0.000025030266,0.00003440224],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00021917984,0.00037782136,0.00027853294,0.00021424514,0.00016618593,0.00025243548,0.00021941651,0.00036879492,0.0005620407],"category_scores_gemma":[0.000095790514,0.00019784077,0.00033814105,0.00016113106,0.00025765784,0.00026965907,0.00036003598,0.0007515935,0.0003205564],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000013021066,0.0000052209957,0.0000236492,0.0000140110715,0.0000010474905,0.000015032489,0.0000075398175,0.000014630054,0.99972576,0.00002117896,0.0000052580367,0.00015363599],"study_design_scores_gemma":[0.0000067864557,0.00006780185,0.0013393332,0.0000042306697,0.0000060073135,0.000089151894,0.000013062984,0.00056372094,0.9969754,0.000025950223,0.0009056309,0.000002928415],"about_ca_topic_score_codex":0.00032849752,"about_ca_topic_score_gemma":0.00037426237,"teacher_disagreement_score":0.0005620407,"about_ca_system_score_codex":0.0005265802,"about_ca_system_score_gemma":0.00020213,"threshold_uncertainty_score":0.0038205981},"labels":[],"label_agreement":null},{"id":"W2024963318","doi":"10.1186/1741-7007-10-8","title":"The embryonic leaf identity gene FUSCA3 regulates vegetative phase transitions by negatively modulating ethylene-regulated gene expression in Arabidopsis","year":2012,"lang":"en","type":"article","venue":"BMC Biology","topic":"Plant Molecular Biology Research","field":"Agricultural and Biological Sciences","cited_by":55,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Natural Sciences and Engineering Research Council of Canada; Canada Research Chairs","keywords":"Biology; Cell biology; Cotyledon; Embryonic stem cell; Regulator; Embryogenesis; Arabidopsis; Gene; Regulation of gene expression; Gene expression; Mutant; Embryo; Genetics; Botany","score_opus":0.03501777078321757,"score_gpt":0.2995473765122041,"score_spread":0.26452960572898654,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2024963318","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9938152,0.00083135837,0.0034703135,0.000074819465,0.000016051401,0.000009609918,0.00053275,0.0001247283,0.0011252146],"genre_scores_gemma":[0.99734795,0.00023594244,0.0008324578,0.000048978403,0.000004007137,0.000008162593,0.00046172252,0.000031981624,0.0010288005],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.999954,0.0000050004887,0.0000035633357,0.000013014528,0.000013967743,0.000010532161],"domain_scores_gemma":[0.99992824,0.00001447798,0.000023205528,0.000006725711,0.000009732828,0.000017492397],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00007238965,0.00028555468,0.000129142,0.00015444774,0.00016533607,0.00017725736,0.00015354659,0.00018415945,0.00063267816],"category_scores_gemma":[0.00008158737,0.000104335835,0.0001600335,0.00011499411,0.00015592034,0.00015204231,0.00017573853,0.00028342256,0.00023060344],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00002984881,0.0000024348012,0.00019169165,0.0000065330883,0.0000010214138,0.000019928111,0.0000040297355,0.000028091617,0.9993311,0.000028412454,0.0000140619395,0.00034276507],"study_design_scores_gemma":[0.000021753023,0.00010424587,0.043196958,0.000006646298,0.000028323846,0.00037046237,0.000038031692,0.0024233856,0.9510171,0.00020125003,0.002581012,0.000010740169],"about_ca_topic_score_codex":0.00092573673,"about_ca_topic_score_gemma":0.0013463123,"teacher_disagreement_score":0.00092573673,"about_ca_system_score_codex":0.0004442385,"about_ca_system_score_gemma":0.00018005392,"threshold_uncertainty_score":0.0032231808},"labels":[],"label_agreement":null},{"id":"W2031461714","doi":"10.1186/1741-7007-10-85","title":"Multiparameter behavioral profiling reveals distinct thermal response regimes in Caenorhabditis elegans","year":2012,"lang":"en","type":"article","venue":"BMC Biology","topic":"Genetics, Aging, and Longevity in Model Organisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":58,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Natural Sciences and Engineering Research Council of Canada; National Human Genome Research Institute; National Institute of General Medical Sciences; National Institute of Mental Health; James S. McDonnell Foundation; Howard Hughes Medical Institute","keywords":"Caenorhabditis elegans; Biology; Aversive Stimulus; Neuroscience; Stimulus (psychology); Nociception; Neuroethology; Noxious stimulus; Context (archaeology); Sensory system; Genetics; Psychology; Cognitive psychology; Gene","score_opus":0.030683425934158858,"score_gpt":0.30064414917818766,"score_spread":0.2699607232440288,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2031461714","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99780315,0.0001901425,0.0011588236,0.000016246906,0.0000039734605,0.000018108285,0.0005560937,0.0000273109,0.00022621837],"genre_scores_gemma":[0.9947978,0.00027319381,0.0033552784,0.00004831713,0.0000041908347,0.00009788388,0.00070658064,0.000020364818,0.0006963068],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9999217,0.0000040829195,0.000006274208,0.000024188246,0.000024555362,0.000019116787],"domain_scores_gemma":[0.9998416,0.00002198682,0.00006215478,0.000012837929,0.00002597578,0.00003546387],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000082417035,0.00022317919,0.00018262328,0.0004421879,0.00017017036,0.00016895261,0.00014313807,0.00023673545,0.00044492737],"category_scores_gemma":[0.00012240933,0.0001384257,0.00019837836,0.00013113554,0.00017371368,0.00012061271,0.0002098909,0.0003799115,0.00010668137],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00003429701,0.00001121198,0.0006331924,0.000009812071,0.0000021904195,0.0000071728755,0.000007376328,0.00003841292,0.99881387,0.000005794762,0.0000092493765,0.00042749234],"study_design_scores_gemma":[0.000012691451,0.00050696044,0.24011157,0.000012054532,0.000036147405,0.00019679987,0.000073768984,0.0021284,0.7562822,0.000059977076,0.0005553015,0.000024088416],"about_ca_topic_score_codex":0.00092067535,"about_ca_topic_score_gemma":0.0023742241,"teacher_disagreement_score":0.00092067535,"about_ca_system_score_codex":0.00031736627,"about_ca_system_score_gemma":0.00012614974,"threshold_uncertainty_score":0.0023026466},"labels":[],"label_agreement":null},{"id":"W2049368206","doi":"10.1186/s12915-014-0081-5","title":"Global identification of Smad2 and Eomesodermin targets in zebrafish identifies a conserved transcriptional network in mesendoderm and a novel role for Eomesodermin in repression of ectodermal gene expression","year":2014,"lang":"en","type":"article","venue":"BMC Biology","topic":"Developmental Biology and Gene Regulation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":44,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Medical Research Council; Lister Institute of Preventive Medicine; European Molecular Biology Laboratory; Natural Sciences and Engineering Research Council of Canada; Wellcome Trust","keywords":"NODAL; Endoderm; Biology; Mesoderm; Zebrafish; FGF and mesoderm formation; Nodal signaling; Cell biology; Blastula; Germ layer; Polarity in embryogenesis; Genetics; Ectoderm; Gastrulation; Embryogenesis; Embryo; Cellular differentiation; Embryonic stem cell; Gene","score_opus":0.010682540694548258,"score_gpt":0.2547731512326869,"score_spread":0.24409061053813863,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2049368206","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98378724,0.001297261,0.007656103,0.00009266253,0.00003524977,0.000046084813,0.0036137167,0.00023667033,0.003234974],"genre_scores_gemma":[0.98225075,0.00039622543,0.006703061,0.00015376191,0.000015897018,0.00008095492,0.003740914,0.00007238449,0.0065859333],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99987257,0.000003671762,0.000005561305,0.000060539747,0.00003710768,0.00002058903],"domain_scores_gemma":[0.99990404,0.000009990206,0.000037820693,0.00000807909,0.000011011626,0.000029124873],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00010141327,0.00048992323,0.00021805154,0.0004996877,0.00024650627,0.00021080386,0.00021690423,0.0002701611,0.0027332196],"category_scores_gemma":[0.000087385844,0.0002488232,0.0004169138,0.00017608743,0.00030357135,0.00013729976,0.000308749,0.00028600154,0.00064840657],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00005768037,0.000006464144,0.0014271978,0.00004646923,0.000008675276,0.00006513511,0.000011450708,0.000060750066,0.99721706,0.000078060366,0.00006588059,0.0009551787],"study_design_scores_gemma":[0.00004171966,0.00023842428,0.27522478,0.000029645606,0.000069748654,0.0007963097,0.000072687835,0.002454667,0.7155438,0.00019189948,0.0053188284,0.00001748312],"about_ca_topic_score_codex":0.0011670241,"about_ca_topic_score_gemma":0.0038504242,"teacher_disagreement_score":0.0027332196,"about_ca_system_score_codex":0.00033178876,"about_ca_system_score_gemma":0.00036118232,"threshold_uncertainty_score":0.009143591},"labels":[],"label_agreement":null},{"id":"W2049579702","doi":"10.1186/1741-7007-10-16","title":"Imbalance of heterologous protein folding and disulfide bond formation rates yields runaway oxidative stress","year":2012,"lang":"en","type":"article","venue":"BMC Biology","topic":"Endoplasmic Reticulum Stress and Disease","field":"Biochemistry, Genetics and Molecular Biology","cited_by":102,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institutes of Health; Fondation Chalmers; Knut och Alice Wallenbergs Stiftelse","keywords":"Biology; Disulfide bond; Oxidative stress; Protein folding; Heterologous; Folding (DSP implementation); Oxidative folding; Oxidative phosphorylation; Biophysics; Cell biology; Biochemistry; Protein disulfide-isomerase; Gene","score_opus":0.01226449503233119,"score_gpt":0.267205844892106,"score_spread":0.25494134985977485,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2049579702","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9851046,0.0015946978,0.010577103,0.00027163158,0.00006523674,0.000041309577,0.0011431847,0.0002407792,0.00096131134],"genre_scores_gemma":[0.99332994,0.00066585134,0.0039984244,0.00017986397,0.0000122436795,0.000043453838,0.0013139906,0.000054713615,0.00040150725],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99915874,0.000095969626,0.00010411356,0.0002762406,0.00023086424,0.00013407068],"domain_scores_gemma":[0.9990363,0.00018672676,0.00038986886,0.0001483766,0.00014805094,0.00009062644],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00089367764,0.0005843956,0.0007767088,0.00038566522,0.00038142697,0.0012664583,0.00040837313,0.0006784798,0.0007209267],"category_scores_gemma":[0.0007575127,0.00021584444,0.00069661625,0.0006808323,0.00055820186,0.00075750984,0.00060063857,0.0014680205,0.00027818608],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002224542,0.000049457674,0.0045251935,0.00012878196,0.00005069871,0.000071886556,0.000040736973,0.00035458524,0.9921983,0.00016370177,0.00010881099,0.0020852785],"study_design_scores_gemma":[0.000008656677,0.0002419272,0.028142327,0.000018873976,0.000066411005,0.00025407027,0.000121953795,0.005685298,0.96249545,0.0006018649,0.0023451913,0.000017990278],"about_ca_topic_score_codex":0.0007839297,"about_ca_topic_score_gemma":0.0007136226,"teacher_disagreement_score":0.0012664583,"about_ca_system_score_codex":0.001070229,"about_ca_system_score_gemma":0.00040292114,"threshold_uncertainty_score":0.0077651143},"labels":[],"label_agreement":null},{"id":"W2053913541","doi":"10.1186/1741-7007-10-60","title":"A universal scaling relationship between body mass and proximal limb bone dimensions in quadrupedal terrestrial tetrapods","year":2012,"lang":"en","type":"article","venue":"BMC Biology","topic":"Paleontology and Evolutionary Biology","field":"Earth and Planetary Sciences","cited_by":472,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Royal Ontario Museum; University of Toronto","funders":"","keywords":"Biology; Quadrupedalism; Evolutionary biology; Allometry; Taxon; Phylogenetic comparative methods; Ecology; Extant taxon; Phylogenetic tree; Scaling; Phylogenetics; Zoology; Anatomy; Genetics","score_opus":0.053428104931025504,"score_gpt":0.27245383268455464,"score_spread":0.21902572775352913,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2053913541","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9957924,0.0003771379,0.0024997806,0.000039462302,0.0000054044613,0.000005696627,0.0003929099,0.00003947502,0.0008476496],"genre_scores_gemma":[0.99888116,0.000038427195,0.0007497211,0.000013891657,0.0000049354885,0.000004441298,0.00023529097,0.0000057602574,0.00006639941],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9997552,0.00003862332,0.000023845432,0.0001346917,0.00003115802,0.000016581263],"domain_scores_gemma":[0.9980876,0.00067067845,0.00069516344,0.00022502759,0.0002089938,0.00011246718],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004211985,0.00016243968,0.00017869727,0.00068184984,0.00020905504,0.00044867216,0.00022676188,0.00025589345,0.00282952],"category_scores_gemma":[0.0026990615,0.00014182957,0.00017337842,0.00050731393,0.00064311805,0.000310838,0.00041372096,0.0002255335,0.00046200337],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000092372204,0.00001646137,0.961641,0.00009892018,0.00014494416,0.00008744573,0.0004299147,0.00054089486,0.014535203,0.00034607417,0.00031748693,0.021749297],"study_design_scores_gemma":[0.0000023876232,0.00003236845,0.998209,0.000009780772,0.000015195375,0.0001757775,0.000092408976,0.0006626196,0.0002471196,0.00032892718,0.00022022538,0.0000041790395],"about_ca_topic_score_codex":0.00068686204,"about_ca_topic_score_gemma":0.0009592482,"teacher_disagreement_score":0.00282952,"about_ca_system_score_codex":0.00010165891,"about_ca_system_score_gemma":0.00012638331,"threshold_uncertainty_score":0.009465694},"labels":[],"label_agreement":null},{"id":"W2055416412","doi":"10.1186/1741-7007-5-52","title":"Left hemispheric dominance during auditory processing in a noisy environment","year":2007,"lang":"en","type":"article","venue":"BMC Biology","topic":"Neuroscience and Music Perception","field":"Neuroscience","cited_by":47,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Baycrest Hospital; University of Toronto","funders":"Bundesministerium für Bildung und Forschung; Canadian Institutes of Health Research; Ontario Innovation Trust","keywords":"Biology; Dominance (genetics); Neuroscience; Cognitive psychology; Genetics; Psychology","score_opus":0.026643514972078376,"score_gpt":0.2751553766133198,"score_spread":0.24851186164124142,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2055416412","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99588424,0.00034171235,0.0011105902,0.00006202017,0.000010327797,0.000007644812,0.00014581629,0.000030400362,0.002407306],"genre_scores_gemma":[0.9991584,0.00007241989,0.00018765454,0.000030004432,0.000009862786,0.0000064948263,0.00006333556,0.000011204644,0.00046061166],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9999049,0.00001247119,0.0000062181807,0.00003230674,0.00002560846,0.000018516268],"domain_scores_gemma":[0.9997217,0.00007362442,0.00009523247,0.000025278412,0.000037090478,0.00004711949],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013186218,0.00024171306,0.00018254528,0.00028571454,0.00017148977,0.00021808523,0.000083669474,0.0001481194,0.0031076518],"category_scores_gemma":[0.0005937107,0.00006135618,0.000075962766,0.00007533127,0.0002792056,0.00014112107,0.00021751974,0.000109543886,0.00037533283],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0014884182,0.00005468858,0.02414433,0.00008072957,0.000039372226,0.0014565726,0.0004769634,0.00015846564,0.95009196,0.00022850714,0.00028132604,0.021498574],"study_design_scores_gemma":[0.000034471017,0.00045819825,0.9353153,0.000013617965,0.00006016372,0.005193698,0.00028091433,0.00073201157,0.056182742,0.000556081,0.0011568666,0.000015975633],"about_ca_topic_score_codex":0.00073584414,"about_ca_topic_score_gemma":0.0015696222,"teacher_disagreement_score":0.0031076518,"about_ca_system_score_codex":0.00013107779,"about_ca_system_score_gemma":0.00011119091,"threshold_uncertainty_score":0.010396063},"labels":[],"label_agreement":null},{"id":"W2056672569","doi":"10.1186/1741-7007-8-17","title":"Identification and characterization of Dlc1 isoforms in the mouse and study of the biological function of a single gene trapped isoform","year":2010,"lang":"en","type":"article","venue":"BMC Biology","topic":"Protein Kinase Regulation and GTPase Signaling","field":"Biochemistry, Genetics and Molecular Biology","cited_by":42,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba; CancerCare Manitoba","funders":"Canadian Cancer Society Research Institute; CancerCare Manitoba Foundation; Genome Canada","keywords":"Gene isoform; Biology; Alternative splicing; Exon; Gene; Mutant; Molecular biology; Genetics; Allele; Gene expression; Complementary DNA; Gene targeting; RNA splicing; RNA","score_opus":0.019875668338605153,"score_gpt":0.24211817349232437,"score_spread":0.2222425051537192,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2056672569","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9685407,0.005253414,0.019218335,0.00033667247,0.00006171591,0.00014806444,0.003963247,0.0003755158,0.0021022183],"genre_scores_gemma":[0.90791196,0.0065660025,0.048238866,0.00035739868,0.00008105526,0.00044383013,0.01772511,0.0003851223,0.018290656],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99971074,0.000017510354,0.000032502496,0.00010721126,0.00008033052,0.000051663577],"domain_scores_gemma":[0.9994393,0.000087465414,0.00019434867,0.00006599214,0.00008228801,0.00013053641],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003880985,0.00056118926,0.00030460226,0.0015240308,0.0002595843,0.00039895537,0.000584035,0.00059099455,0.0016852868],"category_scores_gemma":[0.00020951261,0.00038508436,0.00052716857,0.00039400713,0.00033528556,0.00033432353,0.0002822431,0.0010363507,0.0011099438],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000054921053,0.000014179828,0.0002857429,0.00003092322,0.0000038012474,0.00006107448,0.00001568835,0.000019777086,0.99852055,0.00009507552,0.000021771732,0.00087658496],"study_design_scores_gemma":[0.000048752125,0.00034953147,0.010034273,0.00002835005,0.000063886975,0.0017370596,0.00004371546,0.0006851461,0.97857565,0.00013032134,0.008291949,0.000011307261],"about_ca_topic_score_codex":0.00043424164,"about_ca_topic_score_gemma":0.00068127655,"teacher_disagreement_score":0.0016852868,"about_ca_system_score_codex":0.000431975,"about_ca_system_score_gemma":0.00028478526,"threshold_uncertainty_score":0.005637884},"labels":[],"label_agreement":null},{"id":"W2056953059","doi":"10.1186/s12915-015-0120-x","title":"Open questions: seeking a holistic approach for mitochondrial research","year":2015,"lang":"en","type":"article","venue":"BMC Biology","topic":"Mitochondrial Function and Pathology","field":"Biochemistry, Genetics and Molecular Biology","cited_by":10,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Montreal Neurological Institute and Hospital; McGill University","funders":"Canadian Institutes of Health Research; Killam Trusts; Cancer Research Society","keywords":"Biology; Mitochondrion; Organelle; Cell biology; Computational biology","score_opus":0.28077185159419665,"score_gpt":0.43530795715982595,"score_spread":0.1545361055656293,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2056953059","genre_codex":"commentary","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.003095929,0.30414757,0.049952555,0.61738956,0.015708158,0.00007185897,0.00018905869,0.00018657545,0.009258718],"genre_scores_gemma":[0.11471457,0.5025195,0.1189655,0.18430984,0.066148855,0.0006959397,0.0006740153,0.00040304835,0.011568704],"study_design_codex":"theoretical_or_conceptual","study_design_gemma":"theoretical_or_conceptual","domain_scores_codex":[0.9912615,0.0042981813,0.0005893848,0.0011023687,0.0019262348,0.0008222937],"domain_scores_gemma":[0.9640479,0.01842895,0.0014278395,0.00387959,0.0063177985,0.005897921],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.047857355,0.0015505177,0.004457795,0.0043756925,0.0061670193,0.013308238,0.0073988554,0.012334026,0.008576552],"category_scores_gemma":[0.034348212,0.000737696,0.0017862789,0.0027675682,0.031428955,0.042416535,0.016176267,0.025753643,0.0035504152],"study_design_candidate":"theoretical_or_conceptual","study_design_consensus":"theoretical_or_conceptual","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00019705655,0.0001671034,0.0010515573,0.0028513228,0.0001536992,0.0005931663,0.0035819493,0.0007864354,0.0031859386,0.8209223,0.054029603,0.1124798],"study_design_scores_gemma":[0.000017567121,0.000058147663,0.0002602173,0.0010358392,0.000024217556,0.0002764731,0.0033125177,0.0003281634,0.00033300903,0.8851812,0.10913398,0.000038750288],"about_ca_topic_score_codex":0.0015660325,"about_ca_topic_score_gemma":0.0023905002,"teacher_disagreement_score":0.047857355,"about_ca_system_score_codex":0.006003328,"about_ca_system_score_gemma":0.01299815,"threshold_uncertainty_score":0.25309694},"labels":[],"label_agreement":null},{"id":"W2057785874","doi":"10.1186/s12915-015-0119-3","title":"Distinct genetic architecture underlies the emergence of sleep loss and prey-seeking behavior in the Mexican cavefish","year":2015,"lang":"en","type":"article","venue":"BMC Biology","topic":"Subterranean biodiversity and taxonomy","field":"Earth and Planetary Sciences","cited_by":138,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Division of Integrative Organismal Systems; National Institute of General Medical Sciences; National Eye Institute; York University; National Institutes of Health; National Science Foundation","keywords":"Biology; Sleep (system call); Genetic architecture; Predation; Evolutionary biology; Sleep architecture; Neuroscience; Genetics; Ecology; Gene; Phenotype; Electroencephalography","score_opus":0.076017717336251,"score_gpt":0.23202245980634273,"score_spread":0.15600474247009172,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2057785874","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9994215,0.00003197869,0.00028926964,0.000010699982,7.419316e-7,0.0000048056013,0.00012139403,0.000009984175,0.00010978233],"genre_scores_gemma":[0.99894685,0.000028133649,0.00042570272,0.000018479359,0.0000010968164,0.000020210928,0.00021638986,0.0000089201885,0.0003342093],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99990416,0.000006863079,0.000008586839,0.00004539224,0.000016803078,0.000018138473],"domain_scores_gemma":[0.9996915,0.000048081856,0.00015426686,0.00003238992,0.000024757643,0.00004909382],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000114115086,0.00021493938,0.00015427833,0.00068687607,0.00022739542,0.00017383612,0.00026289697,0.0003048123,0.0012009083],"category_scores_gemma":[0.00023713689,0.00021246233,0.00033362242,0.000242113,0.00039393498,0.00010058808,0.00042716842,0.00029070466,0.000089909765],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00041831497,0.00003127955,0.06004584,0.00003753284,0.000038478607,0.00027516356,0.0001545323,0.00014931265,0.93639797,0.00008917922,0.000039150404,0.0023232754],"study_design_scores_gemma":[0.000013953303,0.00006129532,0.9933656,0.0000040468335,0.000023723736,0.0002977521,0.00006914389,0.00048113792,0.005505371,0.0000338288,0.00013713894,0.000006950397],"about_ca_topic_score_codex":0.004820174,"about_ca_topic_score_gemma":0.0100757275,"teacher_disagreement_score":0.004820174,"about_ca_system_score_codex":0.00039296335,"about_ca_system_score_gemma":0.00023854696,"threshold_uncertainty_score":0.009584248},"labels":[],"label_agreement":null},{"id":"W2059129110","doi":"10.1186/1741-7007-8-100","title":"A novel cell-free mitochondrial fusion assay amenable for high-throughput screenings of fusion modulators","year":2010,"lang":"en","type":"article","venue":"BMC Biology","topic":"Mitochondrial Function and Pathology","field":"Biochemistry, Genetics and Molecular Biology","cited_by":46,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Ottawa","funders":"National Institute of General Medical Sciences; Canadian Institutes of Health Research","keywords":"mitochondrial fusion; Biology; Mitochondrial fission; Cell biology; Mitochondrion; Cytosol; Cell fusion; MFN2; Cell; Computational biology; Mitochondrial DNA; Biochemistry","score_opus":0.014457635837128053,"score_gpt":0.2484337153059514,"score_spread":0.23397607946882334,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2059129110","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.20256577,0.008379749,0.7734534,0.00068125874,0.00037239157,0.0016506923,0.0058959103,0.003145709,0.003855054],"genre_scores_gemma":[0.46230966,0.0067073046,0.50703496,0.0003843522,0.00016085866,0.0025191053,0.013809671,0.00038761357,0.0066865287],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99808925,0.00046359643,0.00018010497,0.00038102886,0.0007770446,0.00010890425],"domain_scores_gemma":[0.9991455,0.00027586892,0.00021636067,0.0001297699,0.00014138233,0.00009099369],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0013355236,0.0016434033,0.0017673158,0.0014484368,0.00040721952,0.0010333867,0.0012462686,0.0014794533,0.0017091606],"category_scores_gemma":[0.0009905495,0.0004688851,0.00094887934,0.0012368519,0.0006146023,0.0008020519,0.00090678904,0.0019045487,0.0012808735],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000056116252,0.00006922767,0.00012667707,0.00010057958,0.000016859876,0.000028626577,0.000013438123,0.0001700139,0.99626666,0.0000927609,0.00013120928,0.0029277138],"study_design_scores_gemma":[0.000025642474,0.00046360109,0.0012315027,0.000013655537,0.00006499675,0.00038975646,0.000016968856,0.003349858,0.9895371,0.0001294391,0.004746576,0.00003088212],"about_ca_topic_score_codex":0.00027588423,"about_ca_topic_score_gemma":0.0006473267,"teacher_disagreement_score":0.0017673158,"about_ca_system_score_codex":0.0005728957,"about_ca_system_score_gemma":0.00041531594,"threshold_uncertainty_score":0.0070629716},"labels":[],"label_agreement":null},{"id":"W2061593270","doi":"10.1186/1741-7007-11-108","title":"Q&amp;A: Cognitive ethology - inside the minds of other species","year":2013,"lang":"en","type":"article","venue":"BMC Biology","topic":"Language and cultural evolution","field":"Social Sciences","cited_by":6,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Lethbridge","funders":"","keywords":"Biology; Ethology; Cognitive science; Cognition; Animal cognition; Neuroscience; Evolutionary biology; Psychology","score_opus":0.08738787993535405,"score_gpt":0.3560464570093638,"score_spread":0.26865857707400975,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2061593270","genre_codex":"methods","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.017606871,0.014085215,0.6461003,0.077447996,0.018861964,0.00030968178,0.01187857,0.025529673,0.18817978],"genre_scores_gemma":[0.38373455,0.0110745,0.44391555,0.006994755,0.011418499,0.0010716243,0.00906995,0.0116562,0.12106444],"study_design_codex":"theoretical_or_conceptual","study_design_gemma":"not_applicable","domain_scores_codex":[0.9994184,0.0002716371,0.000048556325,0.00011228351,0.00011039301,0.00003862018],"domain_scores_gemma":[0.9950506,0.003083269,0.00021118119,0.0005521817,0.0005572598,0.0005455618],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0023155084,0.0009558708,0.00053431356,0.0021011052,0.0012411559,0.0038581057,0.0015254137,0.0025867845,0.078614786],"category_scores_gemma":[0.009493646,0.00036220055,0.0008576886,0.0019904436,0.0026649816,0.008924474,0.0023109876,0.002270646,0.0127113275],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015704805,0.00006418379,0.0017807973,0.0013066954,0.00005950784,0.0004355184,0.0017781584,0.0014521419,0.0030186658,0.4248805,0.30629003,0.25877666],"study_design_scores_gemma":[0.000051108178,0.000039589577,0.0039595827,0.00035541944,0.000030461157,0.0009345997,0.0004936755,0.009266137,0.0023682597,0.5199726,0.4624637,0.00006471113],"about_ca_topic_score_codex":0.001191352,"about_ca_topic_score_gemma":0.0011364266,"teacher_disagreement_score":0.078614786,"about_ca_system_score_codex":0.00066940696,"about_ca_system_score_gemma":0.0013932661,"threshold_uncertainty_score":0.26299268},"labels":[],"label_agreement":null},{"id":"W2067721377","doi":"10.1186/1741-7007-6-38","title":"Viral cystatin evolution and three-dimensional structure modelling: A case of directional selection acting on a viral protein involved in a host-parasitoid interaction","year":2008,"lang":"en","type":"article","venue":"BMC Biology","topic":"Insect-Plant Interactions and Control","field":"Agricultural and Biological Sciences","cited_by":35,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"National Research Council Canada; Biotechnology Research Institute","funders":"Agence Nationale de la Recherche","keywords":"Biology; Negative selection; Genetics; Gene; Gene duplication; Host (biology); Nonsynonymous substitution; Cystatin; Evolutionary biology; Genome; Virology","score_opus":0.025144193754540318,"score_gpt":0.24208272061822939,"score_spread":0.21693852686368906,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2067721377","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9631857,0.00016944832,0.032942947,0.00020739515,0.000013054382,0.000028553803,0.00011427786,0.00019270941,0.0031458843],"genre_scores_gemma":[0.9823944,0.00012128173,0.016641058,0.000017651126,0.0000036057002,0.00002452042,0.00011381918,0.00004185912,0.00064174616],"study_design_codex":"simulation_or_modeling","study_design_gemma":"simulation_or_modeling","domain_scores_codex":[0.9999212,0.000023494695,0.0000038669596,0.00001635951,0.000018338897,0.000016716016],"domain_scores_gemma":[0.99980265,0.000080478094,0.000041367668,0.000021375188,0.000020177897,0.000034043565],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00024953616,0.00031122498,0.00025165998,0.00028509414,0.00043051687,0.0008181889,0.000630102,0.001076025,0.0012039234],"category_scores_gemma":[0.0006478164,0.0002349189,0.0004926879,0.0002815623,0.0005121715,0.00034777969,0.00032312644,0.00043239564,0.00017617509],"study_design_candidate":"simulation_or_modeling","study_design_consensus":"simulation_or_modeling","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00042859002,0.0001970781,0.019206915,0.0001858815,0.000105178304,0.0022890859,0.0006583877,0.81204545,0.13218243,0.023456652,0.0006331883,0.00861122],"study_design_scores_gemma":[0.000020216343,0.00004660042,0.0017393689,0.0000058670703,0.000010068788,0.00015530823,0.00007009789,0.9908987,0.0039262455,0.0023909118,0.0007255596,0.000010981711],"about_ca_topic_score_codex":0.0025808366,"about_ca_topic_score_gemma":0.0014788265,"teacher_disagreement_score":0.0025808366,"about_ca_system_score_codex":0.00056073477,"about_ca_system_score_gemma":0.0003739316,"threshold_uncertainty_score":0.0051316023},"labels":[],"label_agreement":null},{"id":"W2070835225","doi":"10.1186/1741-7007-7-86","title":"Characterization of the histone H2A.Z-1 and H2A.Z-2 isoforms in vertebrates","year":2009,"lang":"en","type":"article","venue":"BMC Biology","topic":"Genomics and Chromatin Dynamics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":109,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta; University of Victoria","funders":"Canadian Institutes of Health Research; National Institute of General Medical Sciences; Ministerio de Ciencia e Innovación; Fondation pour la Recherche Médicale","keywords":"Biology; Chromatin; Histone; Genetics; Epigenetics; Histone H2A; Gene; Heterochromatin; Histone H3; Gene isoform; Molecular biology","score_opus":0.005026139740957037,"score_gpt":0.2227113835297708,"score_spread":0.21768524378881376,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2070835225","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99201125,0.0023995966,0.0029477612,0.00006635847,0.000014495633,0.000020485835,0.0010074975,0.00003077735,0.0015017812],"genre_scores_gemma":[0.9881506,0.0008344715,0.0044389023,0.00009986225,0.000026292677,0.0000236576,0.0036605808,0.000025327003,0.0027403429],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998989,0.0000057480574,0.000009108042,0.00004667938,0.00002149713,0.000018100638],"domain_scores_gemma":[0.99980813,0.000017471259,0.00006079388,0.000015385061,0.000039757324,0.00005838901],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00011900566,0.00023739092,0.0001668447,0.00063452567,0.0002842094,0.00030778386,0.00029571314,0.0003197552,0.0012007161],"category_scores_gemma":[0.00017647755,0.00017350938,0.00029504433,0.00033412947,0.00020830928,0.00017813094,0.00019860339,0.00022536972,0.0005921464],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00016318852,0.000011305382,0.012980458,0.000057813522,0.000022748574,0.00009751535,0.00005872009,0.000047107427,0.98323315,0.000102242186,0.00004339905,0.003182456],"study_design_scores_gemma":[0.000037172707,0.00044266257,0.80353737,0.00003393984,0.00013926791,0.003719539,0.00022677143,0.0010681184,0.17837276,0.00026118362,0.01214216,0.000019117124],"about_ca_topic_score_codex":0.0027165017,"about_ca_topic_score_gemma":0.0034324196,"teacher_disagreement_score":0.0027165017,"about_ca_system_score_codex":0.0002864335,"about_ca_system_score_gemma":0.00017162146,"threshold_uncertainty_score":0.0054013133},"labels":[],"label_agreement":null},{"id":"W2075814595","doi":"10.1186/1741-7007-11-51","title":"Q&amp;A: Antibiotic resistance: what more do we know and what more can we do?","year":2013,"lang":"en","type":"article","venue":"BMC Biology","topic":"Antibiotic Resistance in Bacteria","field":"Biochemistry, Genetics and Molecular Biology","cited_by":17,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"McMaster University","funders":"Canadian Institutes of Health Research","keywords":"Biology; Antibiotic resistance; Antibiotics; Resistance (ecology); Microbiology; Computational biology; Ecology","score_opus":0.014400417991936493,"score_gpt":0.2722734040862513,"score_spread":0.2578729860943148,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2075814595","genre_codex":"commentary","genre_gemma":"commentary","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"commentary","genre_consensus":"commentary","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00034704624,0.03841705,0.0014091431,0.92283094,0.018858623,0.00008443356,0.0002750144,0.00026490717,0.017512811],"genre_scores_gemma":[0.009992988,0.13818572,0.007131223,0.72610885,0.056686483,0.0002635487,0.0009740586,0.00056254637,0.06009459],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9883531,0.0039025692,0.0009719586,0.0011193675,0.0047107474,0.00094238174],"domain_scores_gemma":[0.9313414,0.022252003,0.0034605637,0.0015200032,0.026038012,0.015387963],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.014924936,0.0012025274,0.002433164,0.0023857697,0.0041804966,0.015425935,0.0035630679,0.016903263,0.09461273],"category_scores_gemma":[0.050805807,0.0006953739,0.0011540498,0.0028879973,0.009392279,0.01952589,0.0063072834,0.019345213,0.051879596],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000037618265,0.000042404197,0.00043166653,0.0008861628,0.000009518529,0.00008350858,0.0002222173,0.00005083731,0.00014660839,0.0046724896,0.82614756,0.1672695],"study_design_scores_gemma":[0.000027427179,0.00008041686,0.0010188844,0.002844038,0.0000128409165,0.00032551406,0.0008626289,0.00014875161,0.00011065113,0.02167174,0.9728549,0.00004215489],"about_ca_topic_score_codex":0.0059963265,"about_ca_topic_score_gemma":0.0069284537,"teacher_disagreement_score":0.09461273,"about_ca_system_score_codex":0.0072259638,"about_ca_system_score_gemma":0.014758489,"threshold_uncertainty_score":0.3165111},"labels":[],"label_agreement":null},{"id":"W2076685992","doi":"10.1186/1741-7007-5-41","title":"Broad genomic and transcriptional analysis reveals a highly derived genome in dinoflagellate mitochondria","year":2007,"lang":"en","type":"article","venue":"BMC Biology","topic":"Protist diversity and phylogeny","field":"Biochemistry, Genetics and Molecular Biology","cited_by":80,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia; Dalhousie University","funders":"Australian Research Council; Canadian Institutes of Health Research; Michael Smith Health Research BC; Canada Research Chairs; Canadian Institute for Advanced Research","keywords":"Biology; Genome; Dinoflagellate; Genetics; Mitochondrion; Mitochondrial DNA; Evolutionary biology; Computational biology; Genomics; Gene; Ecology","score_opus":0.01267113921702373,"score_gpt":0.24105088628808846,"score_spread":0.22837974707106473,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2076685992","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9948042,0.0009518236,0.0019689898,0.000063907864,0.0000068659806,0.000009828855,0.0014307695,0.00003438351,0.00072920404],"genre_scores_gemma":[0.9865639,0.00045543868,0.0025110166,0.000115924115,0.000013530657,0.000030730283,0.008762099,0.000023104018,0.0015242241],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99989235,0.0000037363436,0.000005533962,0.000052177566,0.000026779906,0.000019360348],"domain_scores_gemma":[0.9998332,0.000030479345,0.000046562138,0.000016490836,0.000026214668,0.000046952217],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00006570179,0.00020694254,0.00015021893,0.00030980428,0.0002017836,0.00031444427,0.0001262513,0.00026062888,0.0011020515],"category_scores_gemma":[0.00016371881,0.00012329225,0.0002585834,0.00020711584,0.00022983101,0.00014822932,0.00027671191,0.0004229024,0.00036976952],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000052124255,0.0000065039444,0.0019118043,0.000023035253,0.0000041020176,0.0000364821,0.000035651337,0.00002556344,0.9970444,0.000042986132,0.000014333131,0.0008029699],"study_design_scores_gemma":[0.00003333481,0.0005218352,0.56877095,0.00003847666,0.00011269,0.0013649745,0.00033275317,0.0012356096,0.42060232,0.00035578635,0.006610394,0.00002085164],"about_ca_topic_score_codex":0.0009960306,"about_ca_topic_score_gemma":0.002173519,"teacher_disagreement_score":0.0011020515,"about_ca_system_score_codex":0.00032479176,"about_ca_system_score_gemma":0.000188115,"threshold_uncertainty_score":0.0036867857},"labels":[],"label_agreement":null},{"id":"W2080105818","doi":"10.1186/s12915-015-0124-6","title":"A stable JAZ protein from peach mediates the transition from outcrossing to self-pollination","year":2015,"lang":"en","type":"article","venue":"BMC Biology","topic":"Insect-Plant Interactions and Control","field":"Agricultural and Biological Sciences","cited_by":25,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph; Vineland Research and Innovation Centre","funders":"Mitacs; Universiteit Gent","keywords":"Biology; Jasmonic acid; Anthesis; Jasmonate; Outcrossing; Petal; Botany; Gynoecium; Nicotiana tabacum; Cell biology; Gene; Arabidopsis; Stamen; Genetics; Pollen; Cultivar","score_opus":0.03045833718232646,"score_gpt":0.24012078822080649,"score_spread":0.20966245103848002,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2080105818","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9962179,0.0007679743,0.0019465573,0.0000577664,0.00001818994,0.000019444884,0.0004074791,0.00009439198,0.00047030917],"genre_scores_gemma":[0.99520665,0.0002100258,0.00083410856,0.000050828425,0.000008307156,0.000023249122,0.0012839165,0.0000481524,0.002334713],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999069,0.0000071264885,0.0000073300234,0.000031703457,0.00002029714,0.000026781163],"domain_scores_gemma":[0.9998042,0.000040141735,0.000054698856,0.000027840659,0.000016884343,0.000056180816],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00010022309,0.000425272,0.0002535941,0.00024716475,0.00030985393,0.00033013197,0.00032946508,0.00037485815,0.001134175],"category_scores_gemma":[0.00011340305,0.00026348943,0.00029826912,0.00017912427,0.0003164897,0.00020723438,0.00038768857,0.0006866961,0.00048231843],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000021725627,0.000005879257,0.00014828023,0.000013845372,0.00000260689,0.000026992533,0.0000071758395,0.000010470719,0.9995468,0.0000312336,0.0000090164285,0.00017595082],"study_design_scores_gemma":[0.00003337064,0.0001733507,0.04234122,0.000006753154,0.000042874173,0.0005861046,0.00004928419,0.0009876599,0.95362866,0.00011018168,0.002031226,0.000009288634],"about_ca_topic_score_codex":0.0007842238,"about_ca_topic_score_gemma":0.0014324677,"teacher_disagreement_score":0.001134175,"about_ca_system_score_codex":0.0006016392,"about_ca_system_score_gemma":0.00023342256,"threshold_uncertainty_score":0.0043652058},"labels":[],"label_agreement":null},{"id":"W2093606739","doi":"10.1186/1741-7007-11-77","title":"What has driven the evolution of multiple cone classes in visual systems: object contrast enhancement or light flicker elimination?","year":2013,"lang":"en","type":"article","venue":"BMC Biology","topic":"Retinal Development and Disorders","field":"Biochemistry, Genetics and Molecular Biology","cited_by":9,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Queen's University","funders":"Natural Sciences and Engineering Research Council of Canada; Ontario Innovation Trust","keywords":"Flicker; Contrast (vision); Biology; Flicker fusion threshold; Chromatic scale; Color vision; Vertebrate; Biological system; Optics; Physics; Computer science","score_opus":0.014620747969055575,"score_gpt":0.2647903259248044,"score_spread":0.2501695779557488,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2093606739","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9130551,0.013454801,0.04864261,0.011087488,0.00035174558,0.00006717809,0.00014789621,0.00014896465,0.013044149],"genre_scores_gemma":[0.9918651,0.0017468764,0.004419726,0.0011232219,0.00011676341,0.000017990533,0.00003341852,0.000025173016,0.0006516622],"study_design_codex":"bench_or_experimental","study_design_gemma":"theoretical_or_conceptual","domain_scores_codex":[0.9989926,0.00013898715,0.00007010634,0.00040121528,0.00019071023,0.0002063464],"domain_scores_gemma":[0.9956201,0.0016127613,0.0009975106,0.000494719,0.0008816536,0.00039331216],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0038655535,0.00040785785,0.0006899557,0.00039499148,0.00063612364,0.0017956524,0.0011910814,0.0032225288,0.002489211],"category_scores_gemma":[0.0056708893,0.0002797601,0.00055425166,0.00030264028,0.0035680705,0.0031116828,0.0010365868,0.0016863196,0.00035513446],"study_design_candidate":"theoretical_or_conceptual","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0021140322,0.0005039715,0.18038264,0.0031571584,0.00055004144,0.0020109464,0.0035559635,0.024152411,0.3422256,0.2042372,0.002129805,0.23498036],"study_design_scores_gemma":[0.00027296125,0.0026455794,0.5596176,0.0007595907,0.0005967557,0.005566628,0.0046103215,0.072490126,0.114030965,0.20568715,0.032946866,0.00077555014],"about_ca_topic_score_codex":0.0025430333,"about_ca_topic_score_gemma":0.0018541497,"teacher_disagreement_score":0.0038655535,"about_ca_system_score_codex":0.0022532565,"about_ca_system_score_gemma":0.0014267912,"threshold_uncertainty_score":0.02044326},"labels":[],"label_agreement":null},{"id":"W2095283721","doi":"10.1186/1741-7007-8-154","title":"Curvature recognition and force generation in phagocytosis","year":2010,"lang":"en","type":"article","venue":"BMC Biology","topic":"Cellular Mechanics and Interactions","field":"Biochemistry, Genetics and Molecular Biology","cited_by":73,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institutes of Health; Hospital for Sick Children; Universität Regensburg; Deutsche Forschungsgemeinschaft; Max-Planck-Gesellschaft; Universität Heidelberg; Oklahoma Medical Research Foundation; University of Minnesota","keywords":"Biology; Cell biology; Phagocyte; Myosin; Phagocytosis; Actin; Endocytosis; Biophysics; Phagosome; Cytokinesis; Cofilin; Endocytic cycle; Pseudopodia; Myosin light-chain kinase; Actin cytoskeleton; Cytoskeleton; Biochemistry; Receptor; Cell; Cell division","score_opus":0.030479083279602227,"score_gpt":0.26937924243926914,"score_spread":0.23890015915966692,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2095283721","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.978165,0.007994855,0.0074915183,0.0003666002,0.000038805538,0.000043024167,0.00006464966,0.000117367454,0.0057181953],"genre_scores_gemma":[0.99581593,0.0010440225,0.0015015119,0.000041105108,0.000014885124,0.000010743738,0.00006944042,0.0000066370526,0.001495902],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998141,0.000019680856,0.00000775477,0.000035316352,0.000063530766,0.000059652953],"domain_scores_gemma":[0.9998086,0.000039194903,0.000059529248,0.000010738656,0.00003468696,0.000047312264],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00020427226,0.00031001674,0.00022858992,0.00034935915,0.00048700918,0.00052944745,0.00030161568,0.00093164836,0.0013115342],"category_scores_gemma":[0.00027435552,0.00020184228,0.0002450195,0.00017771345,0.0005455506,0.00045232428,0.00057485304,0.00039532184,0.0005450867],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00032398882,0.00004835697,0.004346891,0.00024667478,0.00001516056,0.00046454536,0.000095079195,0.00195322,0.9781225,0.0033469235,0.00029596259,0.010740656],"study_design_scores_gemma":[0.00009480018,0.0012547318,0.13162026,0.000086819404,0.00005579625,0.0054815984,0.0002938976,0.03507214,0.8022924,0.0087356465,0.014903424,0.00010857653],"about_ca_topic_score_codex":0.0005754769,"about_ca_topic_score_gemma":0.00035853952,"teacher_disagreement_score":0.0013115342,"about_ca_system_score_codex":0.0006374543,"about_ca_system_score_gemma":0.00022957631,"threshold_uncertainty_score":0.004625082},"labels":[],"label_agreement":null},{"id":"W2095344398","doi":"10.1186/1741-7007-7-75","title":"A genome-wide synthetic dosage lethality screen reveals multiple pathways that require the functioning of ubiquitin-binding proteins Rad23 and Dsk2","year":2009,"lang":"en","type":"article","venue":"BMC Biology","topic":"Ubiquitin and proteasome pathways","field":"Biochemistry, Genetics and Molecular Biology","cited_by":34,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Genome Canada; Ontario Genomics; Canadian Institutes of Health Research; National Institutes of Health; National Institute of General Medical Sciences; Ontario Genomics Institute","keywords":"Ubiquitin; Biology; Proteasome; Proteolysis; Synthetic lethality; Deubiquitinating enzyme; Ubiquitin ligase; Cell biology; Gene; Biochemistry; Protein degradation; DDB1; DNA-binding protein; Transcription factor; DNA repair; Enzyme","score_opus":0.03961984717404226,"score_gpt":0.2547268315555934,"score_spread":0.21510698438155113,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2095344398","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9709364,0.0011552777,0.018554436,0.00022121673,0.00004106896,0.000100780926,0.006333673,0.000733677,0.001923401],"genre_scores_gemma":[0.9797696,0.0008271836,0.009578557,0.000115491406,0.0000086340115,0.00007200952,0.0064656087,0.00012460274,0.0030384015],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.999795,0.000022730692,0.00002464388,0.00005517775,0.00007977995,0.000022643651],"domain_scores_gemma":[0.9997652,0.000059702394,0.00008657544,0.00002268785,0.000019009687,0.000046829453],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00020844619,0.0010251679,0.00035614683,0.0006106633,0.00023461069,0.000375866,0.00037039435,0.0003936356,0.0018727606],"category_scores_gemma":[0.00014834286,0.00013293908,0.00040165617,0.00042709085,0.00025218047,0.00011374561,0.00033250186,0.00040352021,0.00057535263],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000056422192,0.000022788954,0.0003040533,0.000038242284,0.0000096262875,0.00013791764,0.0000066279176,0.00012025845,0.99806136,0.00005836504,0.00004297195,0.0011413903],"study_design_scores_gemma":[0.000014508752,0.0002290643,0.008211652,0.000008154755,0.000058106063,0.000774967,0.000028983473,0.0012494386,0.98716474,0.000042211625,0.0022098513,0.000008377169],"about_ca_topic_score_codex":0.0007696046,"about_ca_topic_score_gemma":0.001371223,"teacher_disagreement_score":0.0018727606,"about_ca_system_score_codex":0.00034998704,"about_ca_system_score_gemma":0.00033101722,"threshold_uncertainty_score":0.0062649846},"labels":[],"label_agreement":null},{"id":"W2100555030","doi":"10.1186/s12915-015-0191-8","title":"Mechanisms of blood homeostasis: lineage tracking and a neutral model of cell populations in rhesus macaques","year":2015,"lang":"en","type":"article","venue":"BMC Biology","topic":"Hematopoietic Stem Cell Transplantation","field":"Medicine","cited_by":38,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Kavli Institute for Theoretical Physics, University of California, Santa Barbara; National Institute of Allergy and Infectious Diseases; National Heart, Lung, and Blood Institute; Army Research Office; Center for AIDS Research, University of Washington; National Science Foundation; National Institutes of Health; University of California, Los Angeles; California Institute of Regenerative Medicine; University of California, Santa Barbara","keywords":"Biology; clone (Java method); Lineage (genetic); Haematopoiesis; Population; Stem cell; Progenitor cell; Evolutionary biology; Genetics; Cell biology; Immunology; Gene","score_opus":0.1325973632894308,"score_gpt":0.33148128591970966,"score_spread":0.19888392263027885,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2100555030","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.59697735,0.0011151594,0.3890582,0.0017624362,0.00007405705,0.00008803756,0.00033738965,0.00020194758,0.010385451],"genre_scores_gemma":[0.97652006,0.0005317732,0.016087828,0.0002687063,0.00004259822,0.00016007588,0.000105238534,0.00005492877,0.006228892],"study_design_codex":"simulation_or_modeling","study_design_gemma":"observational","domain_scores_codex":[0.999645,0.000102381535,0.000013098813,0.00011584112,0.00007067867,0.000052991487],"domain_scores_gemma":[0.99897826,0.00044381942,0.00030216566,0.000066643195,0.00011145468,0.00009770734],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0013500982,0.00045074246,0.00065430836,0.0008750482,0.0006330262,0.0010958867,0.0017185744,0.001274037,0.0014725528],"category_scores_gemma":[0.0036817745,0.0003123754,0.00090139604,0.00043359576,0.0018709262,0.0013574893,0.0011541222,0.0007957955,0.00028899137],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008599737,0.00007951273,0.0096800085,0.00014536914,0.0000768273,0.0005052173,0.0007535667,0.71143425,0.04063453,0.22847405,0.00088350725,0.0072471215],"study_design_scores_gemma":[0.00000896351,0.000046260106,0.0013311137,0.00000946339,0.000021385304,0.00015448488,0.00006326849,0.97855544,0.0009981653,0.01797805,0.00081580883,0.000017476963],"about_ca_topic_score_codex":0.007943632,"about_ca_topic_score_gemma":0.0027914962,"teacher_disagreement_score":0.007943632,"about_ca_system_score_codex":0.0022373344,"about_ca_system_score_gemma":0.00091590255,"threshold_uncertainty_score":0.016233087},"labels":[],"label_agreement":null},{"id":"W2108093709","doi":"10.1186/1741-7007-11-84","title":"Brain H2A.Z: the long and the short","year":2013,"lang":"en","type":"letter","venue":"BMC Biology","topic":"Epigenetics and DNA Methylation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Victoria","funders":"Canadian Institutes of Health Research","keywords":"Biology; Epigenetics; Histone; Chromatin; Epigenomics; Genetics; Computational biology; Gene; Gene expression; DNA methylation","score_opus":0.017413140024888092,"score_gpt":0.26385957450879205,"score_spread":0.24644643448390396,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2108093709","genre_codex":"commentary","genre_gemma":"commentary","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"commentary","genre_consensus":"commentary","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.001863393,0.0060913903,0.0003860401,0.961723,0.02588824,0.00002074388,0.0000830757,0.0000662588,0.0038777676],"genre_scores_gemma":[0.02285385,0.0064900434,0.0005591798,0.86237055,0.09025082,0.000061162,0.00007024573,0.00004535929,0.01729878],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99913603,0.0001915192,0.000098094955,0.0001705499,0.0002870296,0.00011671716],"domain_scores_gemma":[0.9983563,0.0008991921,0.00015479987,0.00009975233,0.00025314535,0.00023671406],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0016225815,0.0006356315,0.00085725967,0.0002872668,0.0013412437,0.0010596168,0.00081539433,0.0170016,0.0035130857],"category_scores_gemma":[0.006354492,0.0003237481,0.0006806627,0.00022560923,0.002790128,0.0016184973,0.000722896,0.0146467425,0.0042639337],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00045047468,0.000058448728,0.0021753309,0.000225594,0.000049472794,0.009547387,0.00017906405,0.00009829405,0.003640439,0.0064150267,0.9132042,0.0639563],"study_design_scores_gemma":[0.00023565411,0.0002384335,0.004299087,0.00025544612,0.00004670896,0.013865181,0.00040689198,0.0003988059,0.002090256,0.020945229,0.9571453,0.00007300509],"about_ca_topic_score_codex":0.0029117006,"about_ca_topic_score_gemma":0.0033581823,"teacher_disagreement_score":0.0170016,"about_ca_system_score_codex":0.002752445,"about_ca_system_score_gemma":0.00094064046,"threshold_uncertainty_score":0.019970417},"labels":[],"label_agreement":null},{"id":"W2111465191","doi":"10.1186/1741-7007-5-2","title":"A clade uniting the green algae Mesostigma viride and Chlorokybus atmophyticus represents the deepest branch of the Streptophyta in chloroplast genome-based phylogenies","year":2007,"lang":"en","type":"article","venue":"BMC Biology","topic":"Protist diversity and phylogeny","field":"Biochemistry, Genetics and Molecular Biology","cited_by":138,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Biology; Chlorophyta; Phylogenetic tree; Chloroplast DNA; Clade; Green algae; Lineage (genetic); Evolutionary biology; Phylogenomics; Phylogenetics; Botany; Algae; Gene; Genetics","score_opus":0.012570185153232575,"score_gpt":0.2325201584890146,"score_spread":0.21994997333578203,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2111465191","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.996101,0.00028687605,0.0023030033,0.000018296643,0.0000036055621,0.000012191586,0.00044410754,0.00005375298,0.000777127],"genre_scores_gemma":[0.9943131,0.00012362652,0.0032300693,0.000020785043,0.0000054935663,0.000011100685,0.0020795967,0.000018427738,0.00019798955],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998386,0.000018215946,0.000013637559,0.00007045269,0.00003158562,0.000027579488],"domain_scores_gemma":[0.99961746,0.00009286338,0.00009692485,0.000056565754,0.000046665034,0.00008951697],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002473239,0.00032176185,0.00029565816,0.0009683643,0.0006716391,0.00057206466,0.00028264808,0.00035848073,0.0013993798],"category_scores_gemma":[0.00035050878,0.00014565284,0.00033796154,0.0010461505,0.00031191026,0.00034275485,0.0006319113,0.0003626796,0.00041368563],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0007608661,0.00008273199,0.38453722,0.00039257307,0.00025096754,0.00049074116,0.0010144681,0.0016273238,0.58003753,0.0007761274,0.00030884286,0.029720603],"study_design_scores_gemma":[0.00002445719,0.00012291873,0.96588856,0.00007996964,0.00020303499,0.0012406068,0.0008245077,0.005395573,0.017720941,0.00080612226,0.007669801,0.000023419616],"about_ca_topic_score_codex":0.0008106314,"about_ca_topic_score_gemma":0.0014762713,"teacher_disagreement_score":0.0013993798,"about_ca_system_score_codex":0.00026521058,"about_ca_system_score_gemma":0.0004258523,"threshold_uncertainty_score":0.004681349},"labels":[],"label_agreement":null},{"id":"W2111765237","doi":"10.1186/1741-7007-7-70","title":"Genetical genomic determinants of alcohol consumption in rats and humans","year":2009,"lang":"en","type":"article","venue":"BMC Biology","topic":"Neurotransmitter Receptor Influence on Behavior","field":"Neuroscience","cited_by":158,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"National Heart, Lung, and Blood Institute; Medical Research Council; National Institutes of Health; Wellcome Trust; National Institute on Alcohol Abuse and Alcoholism; Instituto Nacional de Investigación y Tecnología Agraria y Alimentaria; National Health and Medical Research Council; Johns Hopkins University; World Health Organization; Howard Hughes Medical Institute","keywords":"Biology; Candidate gene; Quantitative trait locus; Genetics; Single-nucleotide polymorphism; Gene; Inbred strain; Genotype","score_opus":0.09843872432772932,"score_gpt":0.3600514833856701,"score_spread":0.2616127590579408,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2111765237","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9952049,0.00053946784,0.002527772,0.000109596105,0.000007168645,0.000022403843,0.0005022326,0.00004178904,0.0010447261],"genre_scores_gemma":[0.9971103,0.0002793146,0.0018077041,0.00006390652,0.000007840642,0.000038612576,0.0003665128,0.000014551063,0.00031118756],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9996462,0.00014730197,0.000014962271,0.000109682886,0.000054762393,0.000027044898],"domain_scores_gemma":[0.99969554,0.00010094384,0.00008772729,0.000048874088,0.000026968579,0.000040009614],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00031621434,0.0002121166,0.00020352688,0.0006621217,0.00015043106,0.00021770938,0.00013509282,0.00017773159,0.0019411073],"category_scores_gemma":[0.0006118457,0.000095137446,0.00015320802,0.0003757768,0.00033780534,0.00009211556,0.00026222307,0.00018512052,0.00012435383],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0028640951,0.00038127214,0.5605042,0.00017314487,0.0007462149,0.0014665083,0.00095453183,0.00058109517,0.37314817,0.0024698179,0.00068554614,0.056025427],"study_design_scores_gemma":[0.000021587242,0.00031027652,0.99276525,0.000011058645,0.000063160944,0.00085120864,0.000112691945,0.00040497957,0.0038472323,0.00047883048,0.0011231432,0.000010659374],"about_ca_topic_score_codex":0.0015010358,"about_ca_topic_score_gemma":0.0010859014,"teacher_disagreement_score":0.0019411073,"about_ca_system_score_codex":0.000118848926,"about_ca_system_score_gemma":0.00011889902,"threshold_uncertainty_score":0.0064936876},"labels":[],"label_agreement":null},{"id":"W2112339191","doi":"10.1186/1741-7007-2-12","title":"The three-dimensional organization of telomeres in the nucleus of mammalian cells","year":2004,"lang":"en","type":"article","venue":"BMC Biology","topic":"Telomeres, Telomerase, and Senescence","field":"Medicine","cited_by":157,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"CancerCare Manitoba; Health Sciences Centre; University of Manitoba","funders":"Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research; Fondation de France","keywords":"Telomere; Biology; Interphase; Nucleus; Genome instability; Cell cycle; Cell nucleus; Chromosome instability; Cell biology; Genomic organization; Genome; In situ hybridization; Cancer cell; Genetics; Cancer; Gene; Computational biology; DNA; Chromosome; Gene expression; DNA damage","score_opus":0.01860277822076909,"score_gpt":0.2567001284393717,"score_spread":0.2380973502186026,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2112339191","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8066609,0.023891054,0.154021,0.00058900646,0.00014564994,0.000084428466,0.0023938904,0.0005600745,0.011653941],"genre_scores_gemma":[0.94042647,0.0053664804,0.048850343,0.00014340664,0.000023570845,0.000097219774,0.0013024987,0.00006448445,0.0037254489],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999032,0.000010657578,0.000008198316,0.000038673235,0.000031458003,0.0000078231715],"domain_scores_gemma":[0.999833,0.00002974204,0.000049973405,0.000022850121,0.000046790487,0.00001755115],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001553567,0.00013012113,0.00010309327,0.00031566853,0.0002519118,0.0005649735,0.00022755093,0.00029822448,0.0006250336],"category_scores_gemma":[0.00018521304,0.000099861536,0.0001771482,0.0001933606,0.00035121554,0.00033926053,0.0002912445,0.00021628365,0.0004851637],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007028014,0.0000095326495,0.0015353508,0.00012988082,0.000010214359,0.00008347867,0.000114222996,0.00029654414,0.98810405,0.0011276534,0.00010098743,0.008417642],"study_design_scores_gemma":[0.000019581852,0.0002643434,0.031086491,0.00008506163,0.00005249078,0.0020168698,0.00031581332,0.0031881966,0.9311632,0.0025123197,0.029259648,0.000036037563],"about_ca_topic_score_codex":0.0007416543,"about_ca_topic_score_gemma":0.0010885685,"teacher_disagreement_score":0.0007416543,"about_ca_system_score_codex":0.00048082537,"about_ca_system_score_gemma":0.00031535182,"threshold_uncertainty_score":0.0034886599},"labels":[],"label_agreement":null},{"id":"W2113644509","doi":"10.1186/1741-7007-7-42","title":"Ontogeny and phylogeny: molecular signatures of selection, constraint, and temporal pleiotropy in the development of Drosophila","year":2009,"lang":"en","type":"article","venue":"BMC Biology","topic":"Developmental Biology and Gene Regulation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":62,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Biology; Ontogeny; Evolutionary biology; Divergence (linguistics); Pleiotropy; Gene; Drosophila melanogaster; Selection (genetic algorithm); Natural selection; Genetics; Phenotype","score_opus":0.009604877829568863,"score_gpt":0.2541893909734567,"score_spread":0.24458451314388785,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2113644509","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99801135,0.0009163367,0.0005249318,0.00003073852,0.000001580628,0.0000033614813,0.000086797896,0.000005825682,0.00041906588],"genre_scores_gemma":[0.99738556,0.00062323216,0.0010801367,0.00004580075,0.0000068506056,0.000011100453,0.00037266457,0.000009914255,0.00046468418],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99991035,0.000014982104,0.0000068160866,0.000030595045,0.000024622947,0.000012648555],"domain_scores_gemma":[0.99970967,0.00008754667,0.0001240675,0.000011956599,0.000026052629,0.000040697996],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00018401023,0.00016952372,0.00015284163,0.00072730216,0.0002128441,0.00028872947,0.00018372203,0.000253546,0.00044235363],"category_scores_gemma":[0.00030741288,0.00018704133,0.00015065975,0.00036468584,0.00032259576,0.0003425074,0.00028198943,0.00034705404,0.0001136786],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002782793,0.000025634396,0.0564565,0.00011574107,0.000036436704,0.00016388616,0.0002805285,0.00037803562,0.932642,0.0004086534,0.00005334567,0.009160864],"study_design_scores_gemma":[0.000009709058,0.000081100516,0.9861876,0.000011742998,0.000022846194,0.00039018007,0.000099211335,0.0010977804,0.011217999,0.00020692745,0.00066587556,0.000009065359],"about_ca_topic_score_codex":0.00048849906,"about_ca_topic_score_gemma":0.0011812093,"teacher_disagreement_score":0.00072730216,"about_ca_system_score_codex":0.0001995871,"about_ca_system_score_gemma":0.00015845406,"threshold_uncertainty_score":0.0014798045},"labels":[],"label_agreement":null},{"id":"W2114332413","doi":"10.1186/1741-7007-3-21","title":"Human Lsg1 defines a family of essential GTPases that correlates with the evolution of compartmentalization","year":2005,"lang":"en","type":"article","venue":"BMC Biology","topic":"Fungal and yeast genetics research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":53,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ontario Genomics","funders":"European Molecular Biology Organization","keywords":"Biology; GTPase; Compartmentalization (fire protection); Ribosome biogenesis; Nucleolus; Cell biology; Biogenesis; Ran; Context (archaeology); Genetics; Cytoplasm; Ribosome; Computational biology; RNA; Gene; Biochemistry","score_opus":0.020192013100768003,"score_gpt":0.28415832732294616,"score_spread":0.26396631422217814,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2114332413","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99079436,0.0019913733,0.0038864792,0.000090864814,0.000012587419,0.000017820632,0.0018122756,0.0002247693,0.0011693808],"genre_scores_gemma":[0.9890232,0.00040291145,0.0046105324,0.00005962334,0.0000107261085,0.000024584098,0.0049211453,0.000056028148,0.0008911884],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99989927,0.000008433411,0.0000053536332,0.000049444527,0.000019518546,0.000017904818],"domain_scores_gemma":[0.99983966,0.000032853783,0.000062873594,0.00001611002,0.000014589335,0.00003388701],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013334204,0.00040271974,0.00026489797,0.00081683224,0.00033065135,0.00039826377,0.00017824105,0.00050545705,0.0017009815],"category_scores_gemma":[0.00024792828,0.000106803505,0.00030008174,0.00079464255,0.00033743854,0.00020326955,0.0004293818,0.00035225853,0.00086547824],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0008867041,0.000053971246,0.060892414,0.0003074381,0.00006807942,0.0009322234,0.0002675816,0.0019120105,0.90045863,0.001645021,0.0015917548,0.03098417],"study_design_scores_gemma":[0.00010263967,0.00027775328,0.55555826,0.000097087985,0.00021265668,0.008209553,0.00035850704,0.014434069,0.34417787,0.0037413803,0.07275686,0.000073380266],"about_ca_topic_score_codex":0.0007549767,"about_ca_topic_score_gemma":0.0008644719,"teacher_disagreement_score":0.0017009815,"about_ca_system_score_codex":0.00043601857,"about_ca_system_score_gemma":0.00025721284,"threshold_uncertainty_score":0.0056902766},"labels":[],"label_agreement":null},{"id":"W2122131632","doi":"10.1186/1741-7007-6-30","title":"Transcriptome analysis for Caenorhabditis elegansbased on novel expressed sequence tags","year":2008,"lang":"en","type":"article","venue":"BMC Biology","topic":"Genetics, Aging, and Longevity in Model Organisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":53,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia; Canada's Michael Smith Genome Sciences Centre; Simon Fraser University","funders":"Canadian Institutes of Health Research; Genome British Columbia; Genome Canada","keywords":"Biology; Caenorhabditis elegans; Genetics; Gene; Coding region; Computational biology; Expressed sequence tag; Transcriptome; Intron; Intergenic region; Sequence analysis; Alternative splicing; splice; Exon; Genome; Gene expression","score_opus":0.05835206151761349,"score_gpt":0.2805521936669068,"score_spread":0.22220013214929332,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2122131632","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.91293406,0.0034109913,0.071674965,0.0001570192,0.000117442345,0.00023127304,0.008671284,0.00057373376,0.0022292584],"genre_scores_gemma":[0.74707615,0.005315913,0.21651706,0.00015004356,0.000057564906,0.00043446448,0.025934963,0.0001772336,0.0043367194],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99987435,0.000006960792,0.000014741239,0.000038963124,0.000049073307,0.000015760072],"domain_scores_gemma":[0.99989974,0.000018018534,0.000028348186,0.000009377464,0.000032637647,0.000011791154],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00026725544,0.00035355723,0.00029590857,0.0005419,0.00027697874,0.0004186967,0.00022724975,0.00028123902,0.0005797772],"category_scores_gemma":[0.000155276,0.00012125053,0.00048641465,0.0004342381,0.00014913866,0.00027393363,0.00017153376,0.0004330154,0.00043045593],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000051057214,0.000020249858,0.00076341315,0.00010163336,0.000008196342,0.000062906525,0.00001415176,0.0002119096,0.99552864,0.000062310464,0.0000467887,0.0031288073],"study_design_scores_gemma":[0.00001636354,0.00029620554,0.025826305,0.000038292583,0.000105881576,0.00069502473,0.000071805174,0.007870872,0.9550055,0.00024234153,0.009805169,0.000026171338],"about_ca_topic_score_codex":0.00040815223,"about_ca_topic_score_gemma":0.0009695325,"teacher_disagreement_score":0.0005797772,"about_ca_system_score_codex":0.0003574329,"about_ca_system_score_gemma":0.00034259347,"threshold_uncertainty_score":0.002593398},"labels":[],"label_agreement":null},{"id":"W2128301295","doi":"10.1186/1741-7007-9-91","title":"Difficult phylogenetic questions: more data, maybe; better methods, certainly","year":2011,"lang":"en","type":"letter","venue":"BMC Biology","topic":"Insect symbiosis and bacterial influences","field":"Agricultural and Biological Sciences","cited_by":81,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal","funders":"","keywords":"Biology; Endosymbiosis; Phylogenetic tree; Evolutionary biology; Inference; Phylogenetics; Coevolution; Sequence (biology); Computational biology; Genetics; Gene; Plastid; Computer science; Artificial intelligence","score_opus":0.10288263195415212,"score_gpt":0.32266535082202236,"score_spread":0.21978271886787024,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2128301295","genre_codex":"commentary","genre_gemma":"commentary","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"commentary","genre_consensus":"commentary","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00018693396,0.004645557,0.0036379928,0.97234666,0.018575318,0.000010056484,0.00006352415,0.000059480477,0.00047441016],"genre_scores_gemma":[0.0054276884,0.008332522,0.014405712,0.8949391,0.07331766,0.00011520123,0.00017776206,0.00012285513,0.00316137],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9824264,0.009255447,0.0019834666,0.0018677075,0.003908914,0.0005580605],"domain_scores_gemma":[0.84193665,0.118787944,0.004438837,0.0118413875,0.017658219,0.0053369747],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.03420961,0.0013332842,0.0024710936,0.001330351,0.003021675,0.0041416665,0.004152608,0.023390494,0.007664155],"category_scores_gemma":[0.13280627,0.0010421651,0.0017455585,0.0012317225,0.009437391,0.01376591,0.003426237,0.055718783,0.011422689],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00016861627,0.00007170723,0.0010343795,0.00067746465,0.00010976214,0.0018808523,0.0006620382,0.0003481444,0.0009074894,0.020743193,0.89308375,0.08031261],"study_design_scores_gemma":[0.00015592127,0.000081398066,0.0022085726,0.0010188926,0.00006706039,0.006164865,0.0011829475,0.0019147877,0.00063684554,0.16835575,0.8179947,0.0002181402],"about_ca_topic_score_codex":0.0015921231,"about_ca_topic_score_gemma":0.0024717834,"teacher_disagreement_score":0.03420961,"about_ca_system_score_codex":0.0028098258,"about_ca_system_score_gemma":0.0021956458,"threshold_uncertainty_score":0.18091989},"labels":[],"label_agreement":null},{"id":"W2132830449","doi":"10.1186/1741-7007-11-64","title":"Demecology in the Cambrian: synchronized molting in arthropods from the Burgess Shale","year":2013,"lang":"en","type":"article","venue":"BMC Biology","topic":"Paleontology and Stratigraphy of Fossils","field":"Earth and Planetary Sciences","cited_by":37,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Royal Ontario Museum; University of Toronto","funders":"Deutscher Akademischer Austauschdienst; Parks Canada; Yale University; Universität Greifswald; Alexander von Humboldt-Stiftung","keywords":"Biology; Moulting; Ecology; Biota; Habitat; Taphonomy; Population; Arthropod; Period (music); Juvenile; Paleontology; Larva","score_opus":0.022787043102381433,"score_gpt":0.23908273644162345,"score_spread":0.216295693339242,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2132830449","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9993395,0.0002340864,0.000025532498,0.000021213968,0.000001049011,0.0000026357623,0.000053706488,0.0000015008828,0.00032067054],"genre_scores_gemma":[0.9996136,0.00010274834,0.00005998301,0.000018944496,0.0000039709216,0.000003536,0.00012084842,7.021745e-7,0.00007563921],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9999238,0.00001033543,0.000006960831,0.00002519867,0.000014005778,0.000019776022],"domain_scores_gemma":[0.99960953,0.00006136874,0.00018042301,0.000023337549,0.00006998752,0.000055418095],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00021100233,0.00017359329,0.0001692267,0.0018735719,0.0008230907,0.00037114037,0.00030641595,0.00042140877,0.0024706975],"category_scores_gemma":[0.00043298546,0.00011009041,0.00012179957,0.000964074,0.00072019227,0.00030707425,0.0005407914,0.00023426177,0.00018359961],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010000225,0.000018418532,0.9759019,0.000051050734,0.000018452392,0.0004918893,0.002298995,0.00006431643,0.014983869,0.000069869035,0.00010224827,0.0058989185],"study_design_scores_gemma":[9.623518e-7,0.000014366109,0.9992593,0.0000043798077,0.0000028002817,0.00011445052,0.00036636007,0.000024967543,0.00008850446,0.0000089232935,0.00011402856,9.306296e-7],"about_ca_topic_score_codex":0.016482368,"about_ca_topic_score_gemma":0.043965437,"teacher_disagreement_score":0.016482368,"about_ca_system_score_codex":0.0006656446,"about_ca_system_score_gemma":0.0002354656,"threshold_uncertainty_score":0.03277284},"labels":[],"label_agreement":null},{"id":"W2134032322","doi":"10.1186/1741-7007-11-43","title":"Systematic curation of protein and genetic interaction data for computable biology","year":2013,"lang":"en","type":"review","venue":"BMC Biology","topic":"Bioinformatics and Genomic Networks","field":"Biochemistry, Genetics and Molecular Biology","cited_by":20,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Institute for Research in Immunology and Cancer","funders":"Wellcome Trust","keywords":"Biology; Computational biology; Data curation; Genetics; Evolutionary biology; Data science; Computer science","score_opus":0.07445733650746977,"score_gpt":0.34912750057760605,"score_spread":0.2746701640701363,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2134032322","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":"methods","model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":"methods","domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00046597145,0.9606545,0.025982548,0.0047227447,0.0011160531,0.00018354763,0.0019869534,0.00068255037,0.0042051454],"genre_scores_gemma":[0.0031353652,0.9489192,0.03835993,0.0021717453,0.0006659313,0.00022275526,0.0045153764,0.00023259374,0.0017770772],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9954164,0.0010655102,0.00055236043,0.00066297443,0.0021332498,0.00016953055],"domain_scores_gemma":[0.98414606,0.007900187,0.0010622006,0.0016073824,0.0048594605,0.00042465382],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.007886069,0.002079935,0.0034890913,0.016582288,0.0012024381,0.0034594613,0.0058084903,0.0024763767,0.0052347654],"category_scores_gemma":[0.019707015,0.00090680766,0.0016577874,0.0132106645,0.0027591847,0.0048541594,0.0047055776,0.0030833185,0.0072634513],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000030041845,0.00005712304,0.00044099084,0.02788583,0.00023309278,0.00031024727,0.0002839,0.0006938607,0.0021641674,0.01723901,0.10450326,0.8461585],"study_design_scores_gemma":[0.000009296838,0.000016183538,0.0010224425,0.012407598,0.00012974747,0.0006866453,0.000165645,0.0004338283,0.0013283327,0.014836956,0.9689173,0.0000459862],"about_ca_topic_score_codex":0.005310009,"about_ca_topic_score_gemma":0.0055005443,"teacher_disagreement_score":0.99211395,"about_ca_system_score_codex":0.0025728815,"about_ca_system_score_gemma":0.008402944,"threshold_uncertainty_score":0.041706026},"labels":[],"label_agreement":null},{"id":"W2141422302","doi":"10.1186/1741-7007-2-10","title":"Structure of GlgS from Escherichia coli suggests a role in protein–protein interactions","year":2004,"lang":"en","type":"article","venue":"BMC Biology","topic":"Enzyme Structure and Function","field":"Materials Science","cited_by":10,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Biotechnology Research Institute; McGill University","funders":"Canadian Institutes of Health Research","keywords":"Tetratricopeptide; Biology; Escherichia coli; Protein structure; Helix bundle; Protein–protein interaction; Biochemistry; Cell biology; Gene","score_opus":0.00971165613726536,"score_gpt":0.245273038430328,"score_spread":0.23556138229306264,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2141422302","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9923693,0.0015493331,0.0037183706,0.0003268327,0.000029677016,0.000016863123,0.00036114414,0.000111838184,0.001516549],"genre_scores_gemma":[0.99117494,0.0007258411,0.004610523,0.00012719292,0.000010547584,0.000008277401,0.0020511036,0.000014084523,0.0012775213],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999796,0.0000034724255,0.0000013030217,0.000004224215,0.0000048971897,0.000006482756],"domain_scores_gemma":[0.99991024,0.000019694691,0.000022223348,0.000006400812,0.0000169762,0.00002461111],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00007877603,0.0003491552,0.00020934526,0.00018745018,0.00016916056,0.00037295933,0.00022748258,0.00037614364,0.00140234],"category_scores_gemma":[0.00014145316,0.000091235066,0.00022186905,0.00024367597,0.00019892234,0.00023156982,0.000110821056,0.00043374728,0.00038126812],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0008202178,0.00009046771,0.0068184854,0.00040665752,0.000053506523,0.0013114965,0.00012336105,0.0028386225,0.9788342,0.001033291,0.00053774554,0.0071319826],"study_design_scores_gemma":[0.0001773114,0.00083901273,0.104919024,0.00013500453,0.0002447357,0.0034212237,0.00065761514,0.024286672,0.83099765,0.0043644984,0.029894201,0.0000630274],"about_ca_topic_score_codex":0.00091259193,"about_ca_topic_score_gemma":0.0010033605,"teacher_disagreement_score":0.00140234,"about_ca_system_score_codex":0.0003151994,"about_ca_system_score_gemma":0.00021043053,"threshold_uncertainty_score":0.004691303},"labels":[],"label_agreement":null},{"id":"W2141833079","doi":"10.1186/1741-7007-3-22","title":"The complete chloroplast DNA sequences of the charophycean green algae Staurastrum and Zygnema reveal that the chloroplast genome underwent extensive changes during the evolution of the Zygnematales","year":2005,"lang":"en","type":"article","venue":"BMC Biology","topic":"Protist diversity and phylogeny","field":"Biochemistry, Genetics and Molecular Biology","cited_by":89,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Biology; Chloroplast DNA; Green algae; Genome; Botany; Genetics; Gene; Algae","score_opus":0.016121928746457872,"score_gpt":0.21123498102570096,"score_spread":0.19511305227924308,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2141833079","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99123013,0.0010140454,0.002294294,0.000029350089,0.000009117588,0.000020092823,0.0042876913,0.00004235322,0.0010729752],"genre_scores_gemma":[0.9612906,0.000714413,0.0074928156,0.000074392934,0.000013197382,0.000045896802,0.028013486,0.000037518374,0.0023177983],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.999913,0.0000066075922,0.0000060260772,0.000029462046,0.000032604607,0.000012184428],"domain_scores_gemma":[0.9996402,0.00006549051,0.00011515952,0.00004462539,0.000057683275,0.00007683944],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00008330627,0.00028493573,0.00018528616,0.00053450715,0.0002459963,0.00023716742,0.00019164242,0.00024486936,0.001338602],"category_scores_gemma":[0.0003159305,0.00011018063,0.00028495528,0.0007154261,0.00014913226,0.00017993996,0.00019844873,0.00037827098,0.00062457117],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002515732,0.000029229082,0.013124513,0.00017001852,0.000029325325,0.00016862497,0.00017094948,0.00016439377,0.97117853,0.00016334778,0.00009577534,0.0144537315],"study_design_scores_gemma":[0.000044273136,0.00042222586,0.8673686,0.00010008859,0.00016139059,0.0016008326,0.00043394047,0.0011804797,0.106338836,0.00038536254,0.02193194,0.00003196133],"about_ca_topic_score_codex":0.0016512226,"about_ca_topic_score_gemma":0.003759562,"teacher_disagreement_score":0.0016512226,"about_ca_system_score_codex":0.00027906828,"about_ca_system_score_gemma":0.00043964424,"threshold_uncertainty_score":0.0044780374},"labels":[],"label_agreement":null},{"id":"W2143659807","doi":"10.1186/1741-7007-8-105","title":"The Drosophila homolog of the mammalian imprint regulator, CTCF, maintains the maternal genomic imprint in Drosophila melanogaster","year":2010,"lang":"en","type":"article","venue":"BMC Biology","topic":"Genetic Syndromes and Imprinting","field":"Biochemistry, Genetics and Molecular Biology","cited_by":17,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Mount Allison University; Dalhousie University","funders":"Dalhousie University; Wayne State University","keywords":"CTCF; Biology; Genomic imprinting; Chromatin; Genetics; Insulator (electricity); Drosophila melanogaster; X-inactivation; Epigenetics; Regulator; DNA methylation; Heterochromatin; Gene; Imprinting (psychology); X chromosome; Gene expression; Enhancer","score_opus":0.007678675970868722,"score_gpt":0.22997203241391445,"score_spread":0.22229335644304574,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2143659807","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.44720715,0.1746167,0.079783686,0.036457434,0.020232506,0.0004860355,0.023894073,0.014014254,0.20330824],"genre_scores_gemma":[0.78904027,0.028938662,0.01239642,0.0053275805,0.0016272705,0.00015811992,0.008730147,0.0009098523,0.15287176],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99983954,0.000012172302,0.000007881855,0.000037668407,0.000078490935,0.00002413207],"domain_scores_gemma":[0.9998517,0.000026156265,0.00003371107,0.000016171954,0.00003413646,0.00003811715],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00018377214,0.00040700936,0.00031502848,0.00026003493,0.00034121305,0.00048221956,0.00069437956,0.0010654096,0.0063944403],"category_scores_gemma":[0.00039567624,0.00023442913,0.00020529698,0.0001943128,0.0002492943,0.00031354828,0.0003457168,0.00083170965,0.0043558837],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00020931503,0.000015503265,0.00080082886,0.00061136734,0.000017101424,0.0004622097,0.00005230885,0.00019452229,0.9242423,0.0021565738,0.028363531,0.042874467],"study_design_scores_gemma":[0.00012747034,0.0002569129,0.018097607,0.0001402317,0.00007808032,0.0010629318,0.00010274786,0.0014415156,0.5656598,0.0008031511,0.41219485,0.00003478095],"about_ca_topic_score_codex":0.0022009057,"about_ca_topic_score_gemma":0.005382949,"teacher_disagreement_score":0.0063944403,"about_ca_system_score_codex":0.0007883639,"about_ca_system_score_gemma":0.000376572,"threshold_uncertainty_score":0.02139157},"labels":[],"label_agreement":null},{"id":"W2149167091","doi":"10.1186/s12915-015-0195-4","title":"MetAnnotate: function-specific taxonomic profiling and comparison of metagenomes","year":2015,"lang":"en","type":"article","venue":"BMC Biology","topic":"Porphyrin Metabolism and Disorders","field":"Biochemistry, Genetics and Molecular Biology","cited_by":45,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Waterloo","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Metagenomics; Biology; Computational biology; Profiling (computer programming); Phylogenetic tree; Hidden Markov model; Gene; Computer science; Genetics; Artificial intelligence","score_opus":0.061052521052739346,"score_gpt":0.2983390420534631,"score_spread":0.23728652100072378,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2149167091","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.16625701,0.0015682883,0.5616924,0.00058564404,0.00041667788,0.0008292353,0.059641913,0.20441756,0.004591264],"genre_scores_gemma":[0.25335863,0.00050650636,0.6909973,0.0003182911,0.000076027594,0.0012808819,0.04084411,0.011623579,0.000994617],"study_design_codex":"design_other","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9985391,0.00032696925,0.00014765021,0.00054862525,0.00031385876,0.0001237694],"domain_scores_gemma":[0.9970925,0.0012899807,0.0005344316,0.0005677396,0.00026593995,0.00024952102],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0036463249,0.0016608118,0.0013043726,0.0045637325,0.0011123832,0.001969253,0.0019134732,0.0010045699,0.0046001733],"category_scores_gemma":[0.008548424,0.00097651035,0.002070285,0.0023655847,0.00061125145,0.0020616031,0.0034094849,0.0013784058,0.0017277045],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00670475,0.0009371144,0.113507606,0.005767731,0.00397541,0.0014169037,0.004780851,0.027108777,0.31195363,0.014839554,0.087486476,0.4215212],"study_design_scores_gemma":[0.0007190425,0.0013830819,0.13392907,0.0008809877,0.0008745237,0.0026590854,0.0015233719,0.4348064,0.22587506,0.034503486,0.1620704,0.0007755042],"about_ca_topic_score_codex":0.0011497599,"about_ca_topic_score_gemma":0.0016748945,"teacher_disagreement_score":0.0046001733,"about_ca_system_score_codex":0.00079227594,"about_ca_system_score_gemma":0.0011390575,"threshold_uncertainty_score":0.01928389},"labels":[],"label_agreement":null},{"id":"W2150071705","doi":"10.1186/1741-7007-8-73","title":"Plastid evolution: gene transfer and the maintenance of 'stolen' organelles","year":2010,"lang":"en","type":"article","venue":"BMC Biology","topic":"Protist diversity and phylogeny","field":"Biochemistry, Genetics and Molecular Biology","cited_by":20,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University; Canadian Institute for Advanced Research","funders":"","keywords":"Biology; Plastid; Dinoflagellate; Horizontal gene transfer; Gene; Photosynthesis; Gene transfer; Algae; Evolutionary biology; Dinophysis; Genome; Genetics; Botany; Ecology; Chloroplast; Phytoplankton; Algal bloom","score_opus":0.005254419884623318,"score_gpt":0.19428515743732222,"score_spread":0.1890307375526989,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2150071705","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9860212,0.0046796864,0.0056716464,0.00063334906,0.000027582697,0.0000059182757,0.00012395838,0.00006490146,0.0027718332],"genre_scores_gemma":[0.99349266,0.0023985254,0.0020148456,0.00013672291,0.000027352617,0.0000057663315,0.00019756412,0.000021015401,0.001705474],"study_design_codex":"bench_or_experimental","study_design_gemma":"theoretical_or_conceptual","domain_scores_codex":[0.9997857,0.000018214567,0.000014523747,0.000106343214,0.000038248123,0.000036918726],"domain_scores_gemma":[0.9996605,0.000082982,0.00008490117,0.00006335784,0.000034341472,0.000073950985],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00057455176,0.00027904834,0.00025284255,0.0005410036,0.00058613566,0.0009555339,0.000592682,0.0013523999,0.0017378043],"category_scores_gemma":[0.0005920513,0.00026520222,0.00033054926,0.0007787102,0.0011087968,0.0015661787,0.0010080405,0.0009447487,0.00052408583],"study_design_candidate":"theoretical_or_conceptual","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00044558672,0.000051636976,0.026910529,0.000494681,0.0000751976,0.0012649795,0.0012498606,0.001043345,0.8745182,0.017102025,0.000300649,0.07654331],"study_design_scores_gemma":[0.00017354934,0.0005804392,0.6918001,0.0002999665,0.00027971526,0.012689091,0.001954418,0.007314621,0.21063083,0.02453515,0.049521744,0.00022027499],"about_ca_topic_score_codex":0.0005559831,"about_ca_topic_score_gemma":0.00068622804,"teacher_disagreement_score":0.0017378043,"about_ca_system_score_codex":0.00067610183,"about_ca_system_score_gemma":0.00030543978,"threshold_uncertainty_score":0.005813539},"labels":[],"label_agreement":null},{"id":"W2151716132","doi":"10.1186/1741-7007-4-35","title":"The eggshell is required for meiotic fidelity, polar-body extrusion and polarization of the C. elegansembryo","year":2006,"lang":"en","type":"article","venue":"BMC Biology","topic":"Genetics, Aging, and Longevity in Model Organisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":81,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Lunenfeld-Tanenbaum Research Institute; Mount Sinai Hospital","funders":"National Center for Research Resources; Natural Sciences and Engineering Research Council of Canada; National Institutes of Health","keywords":"Biology; Meiosis; Polarization (electrochemistry); Eggshell; Polar body; Polar; Extrusion; Fidelity; Genetics; Cell biology; Ecology; Telecommunications; Gene; Composite material; Materials science; Engineering; Astronomy; Physics","score_opus":0.010328423433085977,"score_gpt":0.24534461078096412,"score_spread":0.23501618734787813,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2151716132","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9897119,0.001470165,0.003592606,0.00013373083,0.000049855083,0.000046725087,0.0009421586,0.00039017363,0.0036626463],"genre_scores_gemma":[0.9901979,0.0003861512,0.0023713296,0.000062076186,0.000006961209,0.000038057093,0.0011588718,0.0000843404,0.005694321],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998691,0.00000615131,0.00001227361,0.00003187761,0.000055144068,0.000025409983],"domain_scores_gemma":[0.99965954,0.000028839431,0.00012399575,0.000025895617,0.000046520316,0.00011514032],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009540072,0.0005937065,0.00017132304,0.00024160776,0.0003407149,0.00038867793,0.0002691405,0.00045627847,0.0025859333],"category_scores_gemma":[0.00022552598,0.00025845206,0.00017428673,0.00007133808,0.00027526284,0.00023330127,0.00048354175,0.00043726063,0.00093993894],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00003514186,0.000011742939,0.00041858724,0.00004246435,0.0000024786898,0.000082420775,0.0000074918153,0.000026057494,0.99825376,0.00006403389,0.000068887275,0.0009869925],"study_design_scores_gemma":[0.000030364317,0.00009445112,0.05272377,0.00005266661,0.000019839877,0.0007011869,0.000053758456,0.001219458,0.93921185,0.000076866396,0.005801945,0.000013941827],"about_ca_topic_score_codex":0.001797023,"about_ca_topic_score_gemma":0.003674556,"teacher_disagreement_score":0.0025859333,"about_ca_system_score_codex":0.00036629368,"about_ca_system_score_gemma":0.0005738496,"threshold_uncertainty_score":0.008650839},"labels":[],"label_agreement":null},{"id":"W2153338140","doi":"10.1186/1741-7007-8-60","title":"Rapid sympatric ecological differentiation of crater lake cichlid fishes within historic times","year":2010,"lang":"en","type":"article","venue":"BMC Biology","topic":"Fish biology, ecology, and behavior","field":"Environmental Science","cited_by":139,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Natural Sciences and Engineering Research Council of Canada; Universität Konstanz; Deutsche Forschungsgemeinschaft; Max-Planck-Gesellschaft; Suomen Kulttuurirahasto; Alexander von Humboldt-Stiftung","keywords":"Sympatric speciation; Cichlid; Biology; Crater lake; Ecology; Population; Trophic level; Impact crater; Fishery","score_opus":0.018117405321053742,"score_gpt":0.23046936206996896,"score_spread":0.21235195674891522,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2153338140","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9998697,0.000021346166,0.000017979182,0.0000029608855,2.0892645e-7,9.43987e-7,0.000012138368,7.008121e-7,0.00007386003],"genre_scores_gemma":[0.9998491,0.000014962968,0.000050850536,0.0000032263051,6.5482885e-7,0.000002357419,0.000041778916,6.0039036e-7,0.00003657325],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9998343,0.000022546235,0.000011673531,0.00006184379,0.000031903084,0.00003769024],"domain_scores_gemma":[0.99960655,0.000052103886,0.00015919341,0.000034659548,0.00007341927,0.0000740927],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002871107,0.000114897644,0.00015044858,0.0012825724,0.0007822866,0.00045771434,0.00028259016,0.00024384586,0.0007320836],"category_scores_gemma":[0.0006065811,0.000120434925,0.0001363964,0.00065534806,0.00075224595,0.0002460463,0.0006387554,0.00019526317,0.00005371102],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007467554,0.000012974361,0.98246264,0.00002210202,0.00005595095,0.00019642849,0.0024746517,0.00007927805,0.011092275,0.000081829865,0.000041336378,0.0034058427],"study_design_scores_gemma":[7.47038e-7,0.000006360108,0.9994312,0.0000014762422,0.0000029287019,0.00006607121,0.0003223954,0.00003419537,0.000072433584,0.000006751652,0.000054057204,0.0000012594124],"about_ca_topic_score_codex":0.020241901,"about_ca_topic_score_gemma":0.07347829,"teacher_disagreement_score":0.020241901,"about_ca_system_score_codex":0.0008868834,"about_ca_system_score_gemma":0.00029288488,"threshold_uncertainty_score":0.040248215},"labels":[],"label_agreement":null},{"id":"W2156862640","doi":"10.1186/1741-7007-9-53","title":"Identification of specificity determining residues in peptide recognition domains using an information theoretic approach applied to large-scale binding maps","year":2011,"lang":"en","type":"article","venue":"BMC Biology","topic":"Protein Structure and Dynamics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":16,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"National Institute on Drug Abuse; National Institutes of Health; Yale University","keywords":"Biology; Computational biology; Binding site; Mutagenesis; Peptide; Genetics; Biochemistry; Gene; Mutation","score_opus":0.02879502542079414,"score_gpt":0.2566996078272651,"score_spread":0.22790458240647093,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2156862640","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.13216402,0.00012546065,0.8658722,0.000096610485,0.000007791466,0.000089889734,0.00009354865,0.00068241404,0.00086804695],"genre_scores_gemma":[0.6126237,0.00009419185,0.38616076,0.000078100755,0.000019905177,0.00020027721,0.0002981802,0.000097381286,0.00042755436],"study_design_codex":"simulation_or_modeling","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99964154,0.00010501068,0.000022257627,0.00007923508,0.00011857773,0.000033293945],"domain_scores_gemma":[0.99775106,0.0015913951,0.0002237352,0.000117826654,0.00020638676,0.00010961358],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0011616334,0.0007657712,0.00084324315,0.0026910806,0.0006976543,0.00077859405,0.0011565738,0.001026566,0.0009967003],"category_scores_gemma":[0.0040778047,0.0004550204,0.0012176284,0.00094290834,0.0008993813,0.0008573703,0.0010840792,0.0007193513,0.000230405],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014158696,0.00015443258,0.0059322473,0.00009951632,0.00010463171,0.00022151296,0.0001181372,0.8972308,0.016479908,0.009993969,0.0004973401,0.0690259],"study_design_scores_gemma":[0.000003650577,0.00001328217,0.00026606835,0.00000213235,0.0000061719015,0.000021363467,0.000006719717,0.99508625,0.0009866632,0.0035418512,0.000060220653,0.0000055724563],"about_ca_topic_score_codex":0.002200738,"about_ca_topic_score_gemma":0.001573208,"teacher_disagreement_score":0.0026910806,"about_ca_system_score_codex":0.0010355657,"about_ca_system_score_gemma":0.0010472069,"threshold_uncertainty_score":0.0075136423},"labels":[],"label_agreement":null},{"id":"W2158439765","doi":"10.1186/1741-7007-5-44","title":"Broadening the horizon – level 2.5 of the HUPO-PSI format for molecular interactions","year":2007,"lang":"en","type":"article","venue":"BMC Biology","topic":"Biomedical Text Mining and Ontologies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":276,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Mount Sinai Hospital; University of Toronto; Lunenfeld-Tanenbaum Research Institute","funders":"National Institutes of Health; European Commission; Genome Canada; Ontario Genomics; National Institute of General Medical Sciences; Ontario Genomics Institute; U.S. Department of Energy","keywords":"Collaboratory; Human proteome project; Computer science; Schema (genetic algorithms); XML; Data science; World Wide Web; Computational biology; Biology; Information retrieval; Proteomics","score_opus":0.08892370149535112,"score_gpt":0.35643402665071994,"score_spread":0.2675103251553688,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2158439765","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.008657208,0.0014732833,0.76017606,0.0057432964,0.0024627128,0.0012156054,0.05534709,0.11711761,0.047807094],"genre_scores_gemma":[0.07009438,0.0026728837,0.62698567,0.0075901514,0.0014469407,0.0020045368,0.23421085,0.03292615,0.022068465],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9885781,0.0027255751,0.0032413988,0.0011187935,0.003380301,0.0009557729],"domain_scores_gemma":[0.97128594,0.007887597,0.0019703784,0.012444528,0.0053822254,0.0010293971],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.018816527,0.0022007956,0.0014786883,0.005096599,0.0017598976,0.01148014,0.005114872,0.0042532254,0.028205141],"category_scores_gemma":[0.037110757,0.00225139,0.0029923536,0.0047291727,0.0020483315,0.016167436,0.009868508,0.008260399,0.03080922],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0014945994,0.0003518412,0.0058049704,0.0023604883,0.000203595,0.0010745559,0.0024123383,0.006000102,0.015005965,0.38722014,0.40166286,0.17640859],"study_design_scores_gemma":[0.00009166381,0.00011297939,0.0012134094,0.00085327285,0.00007153328,0.0005165684,0.00024119492,0.010407167,0.0129586505,0.06278113,0.9105724,0.00018018347],"about_ca_topic_score_codex":0.005435786,"about_ca_topic_score_gemma":0.0023741934,"teacher_disagreement_score":0.028205141,"about_ca_system_score_codex":0.002776628,"about_ca_system_score_gemma":0.006119358,"threshold_uncertainty_score":0.09951252},"labels":[],"label_agreement":null},{"id":"W2158749044","doi":"10.1186/1741-7007-7-67","title":"Retinoic acid enhances skeletal muscle progenitor formation and bypasses inhibition by bone morphogenetic protein 4 but not dominant negative β-catenin","year":2009,"lang":"en","type":"article","venue":"BMC Biology","topic":"Muscle Physiology and Disorders","field":"Biochemistry, Genetics and Molecular Biology","cited_by":79,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ottawa Public Health; Children’s Health Research Institute; University of Ottawa; Western University","funders":"Canadian Institutes of Health Research; Genome Canada; Natural Sciences and Engineering Research Council of Canada; Heart and Stroke Foundation of Canada","keywords":"MyoD; Myogenesis; Biology; Myogenic regulatory factors; Myogenin; MyoD Protein; Cell biology; Wnt signaling pathway; Retinoic acid; MYF5; P19 cell; WNT3A; Progenitor cell; Skeletal muscle; Stem cell; Cellular differentiation; Myocyte; Signal transduction; Endocrinology; Adult stem cell; Cell culture; Genetics","score_opus":0.00807878849343163,"score_gpt":0.23694270202374268,"score_spread":0.22886391353031105,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2158749044","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9843925,0.0045522507,0.005109798,0.00015325083,0.000043093267,0.000055032302,0.00042329892,0.0002486226,0.005022132],"genre_scores_gemma":[0.98301893,0.0023533988,0.005882558,0.00007103278,0.00001962435,0.000062121195,0.0006773201,0.00005496793,0.007860113],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997954,0.000036519526,0.00002536412,0.000048880087,0.000056426943,0.00003747888],"domain_scores_gemma":[0.99983716,0.000034944947,0.000058772002,0.000020512141,0.000014022366,0.000034551333],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00019506202,0.0004932419,0.00025799853,0.00037185097,0.00012116152,0.00027749682,0.00023017488,0.00025165494,0.0019911977],"category_scores_gemma":[0.00010519007,0.00020522671,0.00040038658,0.00015351964,0.00030787633,0.00019081862,0.00022253345,0.0006117529,0.0007160754],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000033682914,0.000008303264,0.0000594602,0.000024601502,0.000002819292,0.000017251574,0.0000049804216,0.000017050244,0.99932826,0.000042806387,0.000008692117,0.00045207792],"study_design_scores_gemma":[0.00001177598,0.00019644666,0.0015637155,0.000007161058,0.000013658175,0.00012847412,0.000010458841,0.00022717821,0.99607533,0.000023243598,0.0017407506,0.0000017709115],"about_ca_topic_score_codex":0.000439801,"about_ca_topic_score_gemma":0.0010034756,"teacher_disagreement_score":0.0019911977,"about_ca_system_score_codex":0.00025987034,"about_ca_system_score_gemma":0.00027928362,"threshold_uncertainty_score":0.006661296},"labels":[],"label_agreement":null},{"id":"W2161296028","doi":"10.1186/1741-7007-10-104","title":"Sex-specific effects of a parasite evolving in a female-biased host population","year":2012,"lang":"en","type":"article","venue":"BMC Biology","topic":"Evolution and Genetic Dynamics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":83,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Schweizerischer Nationalfonds zur Förderung der Wissenschaftlichen Forschung; National Science Foundation","keywords":"Biology; Parasite hosting; Host (biology); Zoology; Sexual dimorphism; Population; Daphnia; Longevity; Adaptation (eye); Ecology; Genetics; Demography","score_opus":0.012991933208378229,"score_gpt":0.27252609367438474,"score_spread":0.2595341604660065,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2161296028","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9994128,0.00008506944,0.0001381867,0.000009940945,0.000001718063,0.000003775317,0.000044620854,0.000004737323,0.00029930455],"genre_scores_gemma":[0.99913836,0.000050324124,0.0003106833,0.000021955291,0.0000028352938,0.0000059697377,0.00010028095,0.000003961301,0.000365639],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9999,0.000023923487,0.0000068373047,0.000029612112,0.000018274872,0.000021468715],"domain_scores_gemma":[0.9996978,0.00006578768,0.00010128156,0.000027907923,0.000035570334,0.0000717549],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014597778,0.0001348276,0.00014072574,0.00020195432,0.00012294603,0.00018540368,0.00013404014,0.00016461921,0.0010304124],"category_scores_gemma":[0.00019423019,0.00010081556,0.000120665514,0.00008097567,0.00016502957,0.00010221034,0.00022162423,0.00027415314,0.00012273273],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015004605,0.000037664795,0.013485181,0.000023327995,0.000009252442,0.000056920377,0.00004609825,0.000050318362,0.9842768,0.000052713174,0.000024126279,0.0017876244],"study_design_scores_gemma":[0.000031934607,0.0018775574,0.76154006,0.000010231005,0.00006906814,0.0011829471,0.00027151237,0.0019239766,0.23137708,0.0001337531,0.0015618447,0.000020114165],"about_ca_topic_score_codex":0.00033437772,"about_ca_topic_score_gemma":0.0007125118,"teacher_disagreement_score":0.0010304124,"about_ca_system_score_codex":0.00019481833,"about_ca_system_score_gemma":0.00010902138,"threshold_uncertainty_score":0.0034470558},"labels":[],"label_agreement":null},{"id":"W2161629263","doi":"10.1186/s12915-015-0208-3","title":"Control of vein network topology by auxin transport","year":2015,"lang":"en","type":"article","venue":"BMC Biology","topic":"Plant Molecular Biology Research","field":"Agricultural and Biological Sciences","cited_by":61,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"Natural Sciences and Engineering Research Council of Canada; University of Alberta","keywords":"Biology; Auxin; Control (management); Network topology; Topology (electrical circuits); Cell biology; Gene; Genetics; Computer network; Computer science; Engineering; Electrical engineering","score_opus":0.03645624943058993,"score_gpt":0.2631236796981249,"score_spread":0.22666743026753497,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2161629263","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97549635,0.00047215816,0.02042489,0.00007443624,0.000014793372,0.000015990385,0.00014712382,0.00024852957,0.0031058332],"genre_scores_gemma":[0.996783,0.00015038416,0.0024109473,0.000011615485,0.0000035060796,0.000008775994,0.00011427943,0.000027189833,0.00049015105],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99988365,0.000019828654,0.000006680848,0.00003615127,0.000031822674,0.000021865104],"domain_scores_gemma":[0.99972564,0.000079602585,0.0000919943,0.000028326524,0.000027291537,0.000047159145],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012985476,0.00025431468,0.00016289135,0.00023631057,0.00015791843,0.0006896171,0.00031690244,0.00020918944,0.0011393315],"category_scores_gemma":[0.00031739107,0.0001887296,0.0001523735,0.00015577085,0.000320546,0.00035168967,0.00036516244,0.00034793591,0.00025389215],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006897858,0.000011612185,0.0011282008,0.000030078148,0.0000050864064,0.00002688898,0.000010092671,0.0022426553,0.99298966,0.00083826773,0.00004392778,0.0026045768],"study_design_scores_gemma":[0.00003328285,0.00009773366,0.014309032,0.000009313817,0.000018995093,0.00027136202,0.000043849857,0.053278256,0.92803526,0.001078093,0.0028076826,0.000017104137],"about_ca_topic_score_codex":0.0003719112,"about_ca_topic_score_gemma":0.00046493113,"teacher_disagreement_score":0.0011393315,"about_ca_system_score_codex":0.00056842016,"about_ca_system_score_gemma":0.00013721744,"threshold_uncertainty_score":0.0041241646},"labels":[],"label_agreement":null},{"id":"W2163808572","doi":"10.1186/1741-7007-9-31","title":"PKC isoforms interact with and phosphorylate DNMT1","year":2011,"lang":"en","type":"article","venue":"BMC Biology","topic":"Epigenetics and DNA Methylation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":58,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institut National de la Recherche Scientifique","funders":"","keywords":"Protein kinase C; DNMT1; Phosphorylation; Biology; Gene isoform; DNA methylation; Methylation; HEK 293 cells; Cell biology; Molecular biology; Biochemistry; Gene expression; DNA; Gene","score_opus":0.025360832708460866,"score_gpt":0.2515788777317013,"score_spread":0.22621804502324042,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2163808572","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98877174,0.0061078663,0.002080501,0.0002432277,0.00008857789,0.00002945814,0.00051437237,0.000054729753,0.0021095814],"genre_scores_gemma":[0.9865302,0.0039655543,0.0015812382,0.00008328007,0.0000515097,0.00003595031,0.001137236,0.000028094873,0.0065869754],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998266,0.000016583204,0.00001330738,0.00004822466,0.000036335223,0.000058931113],"domain_scores_gemma":[0.999801,0.000022550537,0.00007517864,0.000023396178,0.000031696112,0.000046191515],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001596724,0.0005042756,0.00019521457,0.00026168211,0.00029334516,0.00032269358,0.00021150245,0.0002496523,0.0044622454],"category_scores_gemma":[0.00028644715,0.00018002681,0.00045154276,0.00022852125,0.00013068615,0.00028927668,0.00031888636,0.00056488276,0.0014009551],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00054514396,0.0000673395,0.003446936,0.00015251653,0.000027871058,0.00007983437,0.000028329894,0.000104772604,0.9909593,0.000121786165,0.0001815578,0.004284495],"study_design_scores_gemma":[0.000052541625,0.0001806035,0.050143644,0.000026391535,0.000064408014,0.0005660788,0.00005898429,0.0010849322,0.94205606,0.0001338644,0.005623031,0.00000931533],"about_ca_topic_score_codex":0.0010637003,"about_ca_topic_score_gemma":0.0009365803,"teacher_disagreement_score":0.0044622454,"about_ca_system_score_codex":0.0006378438,"about_ca_system_score_gemma":0.0002943526,"threshold_uncertainty_score":0.014927685},"labels":[],"label_agreement":null},{"id":"W2165174906","doi":"10.1186/1741-7007-8-150","title":"Horizontal acquisition of multiple mitochondrial genes from a parasitic plant followed by gene conversion with host mitochondrial genes","year":2010,"lang":"en","type":"article","venue":"BMC Biology","topic":"Plant Parasitism and Resistance","field":"Agricultural and Biological Sciences","cited_by":175,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institutes of Health; National Institute of General Medical Sciences; Natural Sciences and Engineering Research Council of Canada; University of Nebraska-Lincoln","keywords":"Biology; Cuscuta; Horizontal gene transfer; Gene; Pseudogene; Genetics; Mitochondrial DNA; Phylogenetic tree; Parasitic plant; Subclade; Phylogenetics; Genome; Host (biology); Clade; Botany","score_opus":0.009451695739127984,"score_gpt":0.2026835970256857,"score_spread":0.1932319012865577,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2165174906","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9983424,0.00013074442,0.0010836944,0.000012500343,0.0000020112002,0.0000087539265,0.00004650965,0.000016539918,0.0003568257],"genre_scores_gemma":[0.9975682,0.0000886966,0.0015851172,0.000015155196,0.0000026014268,0.000009463379,0.00026974152,0.0000070029178,0.00045387997],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99989355,0.000009754094,0.00000715198,0.000038712013,0.00002796193,0.00002279774],"domain_scores_gemma":[0.99961144,0.00010953294,0.00012819165,0.000047660527,0.000041260635,0.00006189567],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014808465,0.00018651328,0.0001466887,0.00036835342,0.00019334641,0.00029155207,0.00017766957,0.00031253358,0.00091101206],"category_scores_gemma":[0.00034331915,0.000101219564,0.00017153572,0.00024081065,0.00020668501,0.0002079053,0.0002886312,0.0003817682,0.00024604183],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000074227486,0.000017974431,0.008470626,0.00004551464,0.000009451142,0.0002238575,0.000095138894,0.00004062074,0.98809063,0.00011811264,0.000011156268,0.0028027017],"study_design_scores_gemma":[0.000036254973,0.0010758581,0.4480243,0.00005091148,0.000125544,0.006773192,0.000567174,0.0040731323,0.53294927,0.0005170506,0.005782257,0.000025002037],"about_ca_topic_score_codex":0.00028472228,"about_ca_topic_score_gemma":0.00046340062,"teacher_disagreement_score":0.00091101206,"about_ca_system_score_codex":0.00025901597,"about_ca_system_score_gemma":0.00011069464,"threshold_uncertainty_score":0.0030475855},"labels":[],"label_agreement":null},{"id":"W2171146936","doi":"10.1186/1741-7007-4-12","title":"The complete plastid genome sequence of the parasitic green alga Helicosporidium sp. is highly reduced and structured","year":2006,"lang":"en","type":"article","venue":"BMC Biology","topic":"Protist diversity and phylogeny","field":"Biochemistry, Genetics and Molecular Biology","cited_by":128,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"Canadian Institutes of Health Research; Michael Smith Health Research BC; Canadian Institute for Advanced Research","keywords":"Plastid; Biology; Genome; Gene; Genetics; Chloroplast","score_opus":0.017739781578179004,"score_gpt":0.23097894123106133,"score_spread":0.21323915965288232,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2171146936","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9125712,0.0033623583,0.011500603,0.00026451913,0.000109864486,0.00012939535,0.06715216,0.0006469154,0.0042630527],"genre_scores_gemma":[0.7821966,0.0026912082,0.018975511,0.00021387782,0.000047682104,0.00013363165,0.19119808,0.00028195576,0.004261455],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998733,0.000007949571,0.000009893496,0.000044128148,0.000047681056,0.000017073962],"domain_scores_gemma":[0.9996507,0.00006563882,0.00008917145,0.00004745499,0.000084690655,0.00006234866],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001256526,0.00049699645,0.00033328353,0.00047697395,0.0004415578,0.00042330308,0.00022708884,0.00028608553,0.001771086],"category_scores_gemma":[0.0003511161,0.00018147295,0.0003254923,0.0009547148,0.00019183896,0.00023352337,0.00021444564,0.0004124791,0.001108302],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00021330595,0.000018942561,0.0039634057,0.00047218052,0.000034165227,0.0004204818,0.00015082012,0.00022377499,0.97956616,0.00012366682,0.00067886856,0.014134163],"study_design_scores_gemma":[0.00013676315,0.000638402,0.57056844,0.0002835907,0.0006200736,0.0065194145,0.00080059835,0.0030585208,0.28444174,0.00086589274,0.1319623,0.000104204686],"about_ca_topic_score_codex":0.0033507373,"about_ca_topic_score_gemma":0.004607072,"teacher_disagreement_score":0.0033507373,"about_ca_system_score_codex":0.00038226912,"about_ca_system_score_gemma":0.0009065946,"threshold_uncertainty_score":0.006662488},"labels":[],"label_agreement":null},{"id":"W2171671247","doi":"10.1186/1741-7007-4-16","title":"Three rounds (1R/2R/3R) of genome duplications and the evolution of the glycolytic pathway in vertebrates","year":2006,"lang":"en","type":"article","venue":"BMC Biology","topic":"Genomics and Phylogenetic Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":119,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal","funders":"Deutsche Forschungsgemeinschaft","keywords":"Biology; Gene duplication; Deuterostome; Vertebrate; Lineage (genetic); Gene; Genome; Evolutionary biology; Gene family; Phylogenetics; Genetics; Chordate; Functional divergence","score_opus":0.007788690568759174,"score_gpt":0.20500625568401312,"score_spread":0.19721756511525396,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2171671247","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.989422,0.0010028675,0.006611878,0.00009700811,0.000007673676,0.000052921056,0.0016421367,0.00015085687,0.0010125961],"genre_scores_gemma":[0.9792093,0.00072404626,0.014155151,0.00015475448,0.000010287357,0.00011350297,0.0051694526,0.00007979672,0.0003837548],"study_design_codex":"observational","study_design_gemma":"simulation_or_modeling","domain_scores_codex":[0.9991653,0.00014980632,0.000074050105,0.00037974137,0.00013815593,0.00009290462],"domain_scores_gemma":[0.9985672,0.00065749674,0.00040486458,0.00014183541,0.00011247359,0.000116078976],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0014862657,0.00042490932,0.0006517796,0.0018242066,0.0008679831,0.0009866129,0.0005012457,0.000702864,0.0014755228],"category_scores_gemma":[0.0026206782,0.00040828163,0.001311069,0.0019385988,0.0007133907,0.00070985034,0.0010537228,0.00071858976,0.00051352434],"study_design_candidate":"simulation_or_modeling","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0021135637,0.00015853088,0.62057924,0.0020812335,0.0016705178,0.001435645,0.0022820295,0.030563021,0.28182518,0.0048337113,0.0011511891,0.051306147],"study_design_scores_gemma":[0.000075335076,0.00037463728,0.94301426,0.00021067983,0.00086640177,0.0018381965,0.0007549154,0.024869002,0.016349267,0.0042441385,0.0072816224,0.00012146208],"about_ca_topic_score_codex":0.001654885,"about_ca_topic_score_gemma":0.0032918027,"teacher_disagreement_score":0.0018242066,"about_ca_system_score_codex":0.00089974265,"about_ca_system_score_gemma":0.0007627343,"threshold_uncertainty_score":0.007860243},"labels":[],"label_agreement":null},{"id":"W22018140","doi":"10.1186/1741-7007-9-69","title":"Comprados novamente - uma nova cultura organizacional - uma nova mudança","year":2006,"lang":"en","type":"article","venue":"BMC Biology","topic":"Business and Management Studies","field":"Decision Sciences","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"National Institute of General Medical Sciences","keywords":"Nova (rocket); Nova scotia; Political science; Sociology; Engineering; Ethnology","score_opus":0.17556924727615034,"score_gpt":0.3841557213974098,"score_spread":0.20858647412125944,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W22018140","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.70732987,0.05382276,0.086238414,0.032672256,0.007146656,0.00018868747,0.0021953154,0.0012544005,0.109151624],"genre_scores_gemma":[0.80634856,0.033173088,0.08283247,0.0032291252,0.0013608324,0.00023327189,0.00358784,0.00050088874,0.06873395],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.99857175,0.00025417111,0.0001114933,0.0002811224,0.0006182879,0.0001631614],"domain_scores_gemma":[0.9980736,0.00032011652,0.00018693239,0.0005502664,0.000467493,0.00040168653],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0018162809,0.00041278297,0.00057299365,0.0004371977,0.0007517031,0.00427233,0.0008937709,0.0007161202,0.0041330457],"category_scores_gemma":[0.0015269011,0.00025697262,0.00054511946,0.0005722648,0.000969788,0.0020681156,0.0015762106,0.0017204079,0.0020274962],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005975158,0.0003783687,0.006922241,0.0008984401,0.000113113914,0.0009001888,0.0018008748,0.00073187135,0.6976421,0.042777833,0.013331435,0.23390605],"study_design_scores_gemma":[0.000042830383,0.0005563723,0.009633038,0.0002763691,0.0001519612,0.0010307613,0.0017492479,0.0013134276,0.28277144,0.0105076,0.6918546,0.00011237406],"about_ca_topic_score_codex":0.0008688179,"about_ca_topic_score_gemma":0.0026034564,"teacher_disagreement_score":0.00427233,"about_ca_system_score_codex":0.0010357655,"about_ca_system_score_gemma":0.00094332127,"threshold_uncertainty_score":0.01382643},"labels":[],"label_agreement":null},{"id":"W2220428076","doi":"10.1186/s12915-015-0221-6","title":"Nitrate enhances skeletal muscle fatty acid oxidation via a nitric oxide-cGMP-PPAR-mediated mechanism","year":2015,"lang":"en","type":"article","venue":"BMC Biology","topic":"Adipose Tissue and Metabolism","field":"Medicine","cited_by":53,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Biotechnology and Biological Sciences Research Council; Natural Sciences and Engineering Research Council of Canada; WYNG Foundation; Research Councils UK; British Heart Foundation; Wellcome Trust; Medical Research Council; Directorate for Biological Sciences; Wellcome","keywords":"Biology; Beta oxidation; Mitochondrial biogenesis; Carnitine; Peroxisome; Biochemistry; Peroxisome proliferator-activated receptor; Skeletal muscle; AMP-activated protein kinase; Mitochondrion; UCP3; Nitric oxide; Oxidative phosphorylation; Internal medicine; Endocrinology; Protein kinase A; AMPK; Fatty acid; Adipose tissue; Phosphorylation; Uncoupling protein; Receptor; Brown adipose tissue","score_opus":0.03817676539177178,"score_gpt":0.2928835607152351,"score_spread":0.2547067953234633,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2220428076","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99187684,0.0031437248,0.0022232605,0.00033960876,0.00013936571,0.000040807827,0.00040280318,0.00012017995,0.0017134603],"genre_scores_gemma":[0.9900377,0.0018923907,0.00303682,0.000349498,0.00007236372,0.000097978525,0.00053033914,0.00003042133,0.0039525456],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99988985,0.000019628176,0.000012490559,0.000027866923,0.000027609984,0.00002252851],"domain_scores_gemma":[0.99987555,0.000015107986,0.000037268946,0.000010969418,0.000023575003,0.00003750062],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00020482771,0.00033671502,0.00040107212,0.00013053733,0.00014312647,0.0001784652,0.0002246482,0.0003876156,0.0010808097],"category_scores_gemma":[0.00012739933,0.00011413936,0.00046911754,0.00008775092,0.00031392305,0.00017045636,0.00020758975,0.0004270434,0.00019062823],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0016394139,0.00012017324,0.00045145338,0.00013314707,0.000014350196,0.00006314111,0.000020521215,0.000045079967,0.9951214,0.0000731501,0.00011576339,0.0022024324],"study_design_scores_gemma":[0.00042286006,0.007997276,0.026830468,0.000084259205,0.000192982,0.00034685945,0.00006778402,0.001508466,0.95730215,0.00029919724,0.0049299067,0.000017946271],"about_ca_topic_score_codex":0.00086076406,"about_ca_topic_score_gemma":0.0023870468,"teacher_disagreement_score":0.0010808097,"about_ca_system_score_codex":0.00029395657,"about_ca_system_score_gemma":0.00037722415,"threshold_uncertainty_score":0.0036156774},"labels":[],"label_agreement":null},{"id":"W2257950025","doi":"10.1186/s12915-016-0232-y","title":"Serotonin promotes exploitation in complex environments by accelerating decision-making","year":2016,"lang":"en","type":"article","venue":"BMC Biology","topic":"Genetics, Aging, and Longevity in Model Organisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":68,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institute of Mental Health; Directorate for Biological Sciences; York University; School of Medicine, New York University; National Institutes of Health; National Science Foundation; Kinship Foundation; University of Toledo; Searle Scholars Program; Massachusetts Institute of Technology; Burroughs Wellcome Fund","keywords":"Biology; Serotonin; Computational biology; Neuroscience; Evolutionary biology; Genetics; Receptor","score_opus":0.03070655603071548,"score_gpt":0.2838852402420319,"score_spread":0.2531786842113164,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2257950025","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9972475,0.00025521303,0.0015954854,0.000051185576,0.000009642685,0.000009388148,0.00007159315,0.000053486725,0.00070652965],"genre_scores_gemma":[0.9977889,0.000126276,0.0013544004,0.00002015503,0.0000030932151,0.000009506953,0.00004412915,0.000005313453,0.0006481213],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999541,0.00000481941,0.0000038171165,0.000013262639,0.0000117391155,0.000012287174],"domain_scores_gemma":[0.9998764,0.000017684413,0.000046783098,0.0000111125,0.000011248049,0.000036903486],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00010006277,0.00025466553,0.00012458397,0.00012961909,0.0001268986,0.00023767198,0.00015516083,0.0002292823,0.0013317137],"category_scores_gemma":[0.0001300947,0.00008009946,0.00010810748,0.000044339,0.00028208463,0.00015985475,0.000315748,0.00023730857,0.0001306413],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010773659,0.000021743213,0.00218804,0.000054481367,0.000008884523,0.000083976425,0.00001872358,0.00028418397,0.9930918,0.00021400616,0.00006682949,0.0038595775],"study_design_scores_gemma":[0.000057466037,0.0015043212,0.1644269,0.000074381474,0.00006238384,0.000537248,0.0001482513,0.01601504,0.8122256,0.00093368196,0.003982206,0.000032554533],"about_ca_topic_score_codex":0.0006799213,"about_ca_topic_score_gemma":0.0015416023,"teacher_disagreement_score":0.0013317137,"about_ca_system_score_codex":0.00031742314,"about_ca_system_score_gemma":0.00018597255,"threshold_uncertainty_score":0.00445503},"labels":[],"label_agreement":null},{"id":"W2301443945","doi":"10.1186/s12915-016-0243-8","title":"The transcription factor scleraxis is a critical regulator of cardiac fibroblast phenotype","year":2016,"lang":"en","type":"article","venue":"BMC Biology","topic":"Cardiac Fibrosis and Remodeling","field":"Medicine","cited_by":72,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba; St. Boniface Hospital","funders":"Canadian Institutes of Health Research; Research Manitoba","keywords":"Myofibroblast; Biology; Cell biology; Transcription factor; Extracellular matrix; Cardiac fibrosis; Fibroblast; Fibrosis; Cancer research; Gene; Genetics; Pathology; Cell culture; Medicine","score_opus":0.03259540497583468,"score_gpt":0.29367033337244625,"score_spread":0.26107492839661156,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2301443945","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.91793513,0.030473882,0.029964747,0.0009433609,0.00020518585,0.00014325524,0.0023724572,0.0007926663,0.017169336],"genre_scores_gemma":[0.9850079,0.00489304,0.004364175,0.000158162,0.000075094395,0.00006771072,0.001206944,0.00004679627,0.0041800793],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99981815,0.000026489253,0.0000103182265,0.000037849702,0.00008452013,0.000022693552],"domain_scores_gemma":[0.9998029,0.000025006344,0.00008550387,0.000008680999,0.00003340422,0.00004456044],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001520123,0.00054295576,0.00019534567,0.0002914145,0.00020109465,0.0002897752,0.00011934419,0.00021082335,0.0019111226],"category_scores_gemma":[0.00014504815,0.00010068923,0.0002045231,0.00015564688,0.00029608805,0.00011052609,0.00025548146,0.00036408505,0.000536166],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007169501,0.000005797349,0.0005585898,0.000047845242,0.0000046737864,0.00012904474,0.00001007766,0.000054711425,0.995197,0.00014487418,0.00018103574,0.0035948276],"study_design_scores_gemma":[0.00003738655,0.00055098854,0.030395709,0.00003911637,0.00004359474,0.0024576879,0.000073631025,0.0012577733,0.9444122,0.0002907044,0.020428611,0.000012678618],"about_ca_topic_score_codex":0.0004212359,"about_ca_topic_score_gemma":0.0005653196,"teacher_disagreement_score":0.0019111226,"about_ca_system_score_codex":0.00031554006,"about_ca_system_score_gemma":0.00024296467,"threshold_uncertainty_score":0.006393373},"labels":[],"label_agreement":null},{"id":"W2338428112","doi":"10.1186/s12915-016-0252-7","title":"The human Na+/H+ exchanger 1 is a membrane scaffold protein for extracellular signal-regulated kinase 2","year":2016,"lang":"en","type":"article","venue":"BMC Biology","topic":"Ion Transport and Channel Regulation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":56,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"University of Toronto; Villum Fonden; Novo Nordisk; Natur og Univers, Det Frie Forskningsråd","keywords":"Biology; Extracellular; Scaffold protein; Cell biology; Sodium–hydrogen antiporter; Extracellular signal-regulated kinases; Signal transduction; Kinase; Protein kinase A; Biophysics; Biochemistry; Sodium; Materials science","score_opus":0.01951603218781079,"score_gpt":0.25221297670116355,"score_spread":0.23269694451335277,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2338428112","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99377877,0.0011102076,0.0036873333,0.00012476835,0.000025023135,0.000016216492,0.0002509523,0.00009722883,0.0009094477],"genre_scores_gemma":[0.9923962,0.00055817835,0.0030072534,0.000041500294,0.000015127895,0.00001459154,0.0010381734,0.000012004092,0.0029168266],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999515,0.000005035055,0.0000029874416,0.000016928268,0.000014623299,0.000008890786],"domain_scores_gemma":[0.99994826,0.0000073798196,0.000018320496,0.0000050818903,0.0000065035133,0.000014317087],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000059056518,0.000246196,0.00014750053,0.0001147146,0.00016293951,0.00020614397,0.00014086228,0.00019673412,0.0010791051],"category_scores_gemma":[0.0000997655,0.000078065306,0.00013060344,0.000090052454,0.00012167861,0.00014339312,0.0001586099,0.00018791422,0.0004657957],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00021081054,0.000018614055,0.001524007,0.000047229725,0.000009940417,0.00016929752,0.000014550603,0.00026774386,0.99215204,0.00026329214,0.00020600078,0.005116471],"study_design_scores_gemma":[0.00004074874,0.000250572,0.042313214,0.000009456199,0.000027855034,0.0024415515,0.000045424265,0.005089734,0.9338999,0.00038916274,0.015479708,0.000012715438],"about_ca_topic_score_codex":0.00025659168,"about_ca_topic_score_gemma":0.00030284893,"teacher_disagreement_score":0.0010791051,"about_ca_system_score_codex":0.00021738352,"about_ca_system_score_gemma":0.00010771317,"threshold_uncertainty_score":0.003610015},"labels":[],"label_agreement":null},{"id":"W2465165524","doi":"10.1186/s12915-016-0270-5","title":"Somato-dendritic decoupling as a novel mechanism for protracted cortical maturation","year":2016,"lang":"en","type":"article","venue":"BMC Biology","topic":"Neurogenesis and neuroplasticity mechanisms","field":"Neuroscience","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"Canadian Institutes of Health Research; Sinneave Family Foundation","keywords":"Neurogenesis; Neuroscience; Biology; Neuroplasticity; Hippocampal formation; Embryonic stem cell; Mechanism (biology); Biological neural network","score_opus":0.0756014321613865,"score_gpt":0.3127255958858193,"score_spread":0.2371241637244328,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2465165524","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98133737,0.0013180895,0.015371981,0.00007580525,0.000017092729,0.000019093355,0.00017548716,0.0001311017,0.0015539742],"genre_scores_gemma":[0.9964121,0.0003406942,0.0023821255,0.000018961564,0.0000042729507,0.000014950034,0.00009954317,0.000010806622,0.00071651296],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998982,0.000007580242,0.000008302718,0.000028104396,0.0000355483,0.000022242863],"domain_scores_gemma":[0.999678,0.00004565672,0.00013381237,0.00004747344,0.000030448004,0.0000646661],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015132074,0.0002143238,0.00022738522,0.0002696097,0.00016362329,0.00034859378,0.00047470268,0.00035176272,0.00088660035],"category_scores_gemma":[0.00028735583,0.00015769499,0.00021958689,0.0001380836,0.00046611705,0.00043544252,0.000600638,0.0007014848,0.00022216224],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00005140804,0.0000090464255,0.001706919,0.000032466458,0.000006800694,0.00024476033,0.000037170972,0.00012509731,0.99493486,0.00042829863,0.000017170833,0.0024061305],"study_design_scores_gemma":[0.0000150916385,0.0003036513,0.12044413,0.000023230252,0.000042312313,0.004517531,0.00014942334,0.0037083095,0.8668158,0.0014416091,0.002519064,0.000019916406],"about_ca_topic_score_codex":0.00026829733,"about_ca_topic_score_gemma":0.0004347076,"teacher_disagreement_score":0.00088660035,"about_ca_system_score_codex":0.00033575034,"about_ca_system_score_gemma":0.00022493606,"threshold_uncertainty_score":0.0029659271},"labels":[],"label_agreement":null},{"id":"W2474117387","doi":"10.1186/s12915-016-0271-4","title":"Cambrian suspension-feeding tubicolous hemichordates","year":2016,"lang":"en","type":"article","venue":"BMC Biology","topic":"Paleontology and Stratigraphy of Fossils","field":"Earth and Planetary Sciences","cited_by":61,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Royal Ontario Museum; University of Toronto","funders":"Natural Sciences and Engineering Research Council of Canada; University of Toronto; Parks Canada; National Geographic Society; Smithsonian Institution","keywords":"Biology; Ecology; Zoology","score_opus":0.023384793315963256,"score_gpt":0.23713555157876015,"score_spread":0.21375075826279688,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2474117387","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99693394,0.00023604477,0.00010789503,0.000017658032,0.0000016367909,0.0000049507616,0.00009519025,0.000009123664,0.0025934982],"genre_scores_gemma":[0.9989465,0.00016036924,0.00022024183,0.000015294754,0.0000040846944,0.0000043135155,0.00022156484,0.0000029677221,0.00042479235],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9999039,0.00000780166,0.00000615737,0.000033082622,0.00002220287,0.000026803287],"domain_scores_gemma":[0.9998166,0.0000266673,0.00007111192,0.000020196412,0.000033713455,0.000031714564],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012295342,0.00034267938,0.0002352511,0.0011248442,0.0013586773,0.00050069037,0.00043760633,0.00037494945,0.005518271],"category_scores_gemma":[0.00044286708,0.00012075818,0.00010346713,0.0010183195,0.0009362396,0.0003418444,0.0007874475,0.00023570684,0.0006718647],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00078695884,0.00007595527,0.7988671,0.00028710446,0.00009272871,0.0011808707,0.0054349327,0.0004932477,0.116228595,0.0014158959,0.00044755163,0.07468901],"study_design_scores_gemma":[0.000006097417,0.00007562585,0.99470913,0.000034103043,0.000020939742,0.00074718805,0.00064132066,0.00025225044,0.0010384399,0.00015287363,0.0023164295,0.0000057175475],"about_ca_topic_score_codex":0.01649075,"about_ca_topic_score_gemma":0.036145967,"teacher_disagreement_score":0.01649075,"about_ca_system_score_codex":0.00080850994,"about_ca_system_score_gemma":0.00034308046,"threshold_uncertainty_score":0.03278953},"labels":[],"label_agreement":null},{"id":"W2477505313","doi":"10.1186/s12915-016-0284-z","title":"On the reversibility of parasitism: adaptation to a free-living lifestyle via gene acquisitions in the diplomonad Trepomonas sp. PC1","year":2016,"lang":"en","type":"article","venue":"BMC Biology","topic":"Protist diversity and phylogeny","field":"Biochemistry, Genetics and Molecular Biology","cited_by":78,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canadian Institute for Advanced Research; University of British Columbia; Dalhousie University","funders":"Akademiska Sjukhuset; Vetenskapsrådet; Science for Life Laboratory; Uppsala Universitet; Svenska Forskningsrådet Formas","keywords":"Biology; Adaptation (eye); Parasitism; Gene; Genetics; Ecology; Evolutionary biology; Zoology; Host (biology); Neuroscience","score_opus":0.023095453124700373,"score_gpt":0.2559573162507704,"score_spread":0.23286186312607002,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2477505313","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99794036,0.00040916068,0.00030999313,0.000047705846,0.0000049086852,0.000008211748,0.00089286023,0.000013994562,0.00037285982],"genre_scores_gemma":[0.99481285,0.000618448,0.0011442419,0.000080332524,0.000014798194,0.000031371128,0.002634256,0.000016142869,0.0006475506],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9998964,0.0000058420037,0.000006521939,0.000042009913,0.00002303732,0.0000262262],"domain_scores_gemma":[0.99971884,0.00005706926,0.00009989877,0.000018192031,0.000046611545,0.000059348924],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009172541,0.00030315833,0.00027965184,0.00044463563,0.00035479217,0.0005377298,0.0001652152,0.0003805832,0.0008057937],"category_scores_gemma":[0.00023589053,0.0001292286,0.00026584422,0.00054824696,0.00033209764,0.00045820762,0.00050657435,0.00048019152,0.00027720304],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00022762256,0.00002361312,0.016506413,0.00014179821,0.00001202058,0.00025413334,0.0002957804,0.00012717038,0.97829264,0.00006588182,0.000055368222,0.003997627],"study_design_scores_gemma":[0.000024193732,0.0005137823,0.89407676,0.00005483408,0.00009018076,0.0017358602,0.0013589704,0.0015676836,0.09647788,0.00024625674,0.0038163734,0.000037253525],"about_ca_topic_score_codex":0.00072106684,"about_ca_topic_score_gemma":0.001035361,"teacher_disagreement_score":0.0008057937,"about_ca_system_score_codex":0.00020892412,"about_ca_system_score_gemma":0.00020732747,"threshold_uncertainty_score":0.0026956797},"labels":[],"label_agreement":null},{"id":"W2559838807","doi":"10.1186/s12915-016-0325-7","title":"Functional characterisation of long intergenic non-coding RNAs through genetic interaction profiling in Saccharomyces cerevisiae","year":2016,"lang":"en","type":"article","venue":"BMC Biology","topic":"Cancer-related molecular mechanisms research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":32,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"European Research Council","keywords":"Biology; Saccharomyces cerevisiae; Computational biology; Genetics; Gene; Telomere; Intergenic region; Genome; Transcriptome; RNA; Non-coding RNA; Gene expression profiling; Small nucleolar RNA; Genetic screen; Gene expression; Phenotype","score_opus":0.029803086516547044,"score_gpt":0.3059735245262796,"score_spread":0.27617043800973257,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2559838807","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9851328,0.00075605564,0.010231779,0.000043922937,0.000009150655,0.00003400718,0.0028526725,0.00018939697,0.00075024355],"genre_scores_gemma":[0.9798784,0.00044405638,0.013629845,0.000057783272,0.0000037068594,0.000042583517,0.004923516,0.00008660492,0.00093338],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99988973,0.0000108225195,0.000013709549,0.000032778407,0.00004186597,0.000011082359],"domain_scores_gemma":[0.9998227,0.000043148397,0.00006125172,0.000017699693,0.000028959515,0.000026308535],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015363225,0.00028000507,0.00015880194,0.0004568033,0.00012472244,0.00030395968,0.00015515344,0.0001933429,0.00047299193],"category_scores_gemma":[0.00019354191,0.00008380482,0.00029220406,0.00034026144,0.00013045805,0.00009723754,0.00019138421,0.00026113205,0.0003435372],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000031570482,0.000007698942,0.0009732116,0.000027185362,0.000007558554,0.000025533876,0.000009677066,0.0000778874,0.99780697,0.000020676425,0.000012956561,0.0009990679],"study_design_scores_gemma":[0.000007251731,0.00015589816,0.03331389,0.0000058304763,0.00006052237,0.00028885668,0.00005626417,0.0033083064,0.9605909,0.00008069799,0.0021213323,0.000010211553],"about_ca_topic_score_codex":0.00070427574,"about_ca_topic_score_gemma":0.0013119233,"teacher_disagreement_score":0.00070427574,"about_ca_system_score_codex":0.00022017158,"about_ca_system_score_gemma":0.00012835054,"threshold_uncertainty_score":0.0015974045},"labels":[],"label_agreement":null},{"id":"W2562326962","doi":"10.1186/s12915-016-0333-7","title":"Sudden death due to paralysis and synaptic and behavioral deficits when Hip14/Zdhhc17 is deleted in adult mice","year":2016,"lang":"en","type":"article","venue":"BMC Biology","topic":"Genetic Neurodegenerative Diseases","field":"Neuroscience","cited_by":36,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Child and Family Research Institute; Memorial University of Newfoundland; University of British Columbia","funders":"Canadian Institutes of Health Research; Killam Trusts; Cure Huntington's Disease Initiative; CHDI Foundation","keywords":"Astrogliosis; Biology; Neuroscience; Synaptic plasticity; Synaptic fatigue; Amyotrophic lateral sclerosis; Gliosis; Internal medicine; Central nervous system; Disease; Excitatory postsynaptic potential; Medicine; Receptor","score_opus":0.055982886133119254,"score_gpt":0.30398687852394324,"score_spread":0.248003992390824,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2562326962","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99077976,0.00061681547,0.0026783699,0.00017084232,0.000065933964,0.000113883485,0.003389741,0.0005032582,0.0016814204],"genre_scores_gemma":[0.9780588,0.0010780336,0.004120951,0.0002928086,0.000045858476,0.0003217892,0.0051366487,0.0001813598,0.010763715],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.999699,0.000028632183,0.000042929638,0.00007599325,0.00007624959,0.00007726245],"domain_scores_gemma":[0.99954385,0.00003993977,0.0001886775,0.00002781791,0.000025092471,0.00017460203],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00024736044,0.0010763078,0.00046962002,0.001333076,0.0003769511,0.00041519862,0.00048444787,0.0010188867,0.004232156],"category_scores_gemma":[0.00015954138,0.00046145316,0.0005767013,0.00038185847,0.0006911821,0.00035482767,0.0005856979,0.0013448482,0.0009621429],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0009725366,0.00022292987,0.0018990748,0.00012727686,0.000065236694,0.0016269112,0.00010933689,0.0002961311,0.9902007,0.0003514267,0.00044447594,0.0036838616],"study_design_scores_gemma":[0.00058372295,0.0039492813,0.076542534,0.00013254404,0.00024995027,0.008988553,0.00036125525,0.0037119421,0.89763296,0.0005140938,0.007267508,0.00006564573],"about_ca_topic_score_codex":0.0007219807,"about_ca_topic_score_gemma":0.0015035162,"teacher_disagreement_score":0.004232156,"about_ca_system_score_codex":0.00049985584,"about_ca_system_score_gemma":0.0002931198,"threshold_uncertainty_score":0.0141580105},"labels":[],"label_agreement":null},{"id":"W2573717593","doi":"10.1186/s12915-016-0342-6","title":"How flies are flirting on the fly","year":2017,"lang":"en","type":"article","venue":"BMC Biology","topic":"Neurobiology and Insect Physiology Research","field":"Neuroscience","cited_by":34,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Simon Fraser University","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Biology; Flirting; Zoology; Evolutionary biology; Ecology; Communication","score_opus":0.18064953160599484,"score_gpt":0.3563296716235511,"score_spread":0.17568014001755627,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2573717593","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.562208,0.030449625,0.08249551,0.030388644,0.0070930356,0.00025179618,0.0025452715,0.0061806934,0.27838746],"genre_scores_gemma":[0.88444567,0.0076448712,0.01588435,0.0074167466,0.0004034854,0.000077319186,0.0011893726,0.00077525515,0.08216287],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9997358,0.00004456628,0.000008255673,0.000066909575,0.000080084705,0.00006447161],"domain_scores_gemma":[0.9997751,0.000022445338,0.000032687498,0.000027142753,0.000069450536,0.00007316631],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00019937656,0.00028535575,0.00029569285,0.0002793297,0.00074153737,0.001369797,0.0004899732,0.0011021176,0.008003911],"category_scores_gemma":[0.00057525886,0.00017987822,0.0002888418,0.00014089249,0.00098443,0.0012087282,0.0006096256,0.0011644025,0.0039420184],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00024291869,0.00006662698,0.019696623,0.0007037913,0.00013766489,0.0019249055,0.0028026635,0.0016100988,0.6656348,0.04793913,0.062064,0.19717677],"study_design_scores_gemma":[0.000030137893,0.0002920292,0.05320987,0.0005045981,0.00013306837,0.0026235124,0.0040048696,0.0028993962,0.07633199,0.029488506,0.83036,0.00012206278],"about_ca_topic_score_codex":0.0023576792,"about_ca_topic_score_gemma":0.0031516624,"teacher_disagreement_score":0.008003911,"about_ca_system_score_codex":0.00043299375,"about_ca_system_score_gemma":0.00029508423,"threshold_uncertainty_score":0.026775777},"labels":[],"label_agreement":null},{"id":"W2588638903","doi":"10.1186/s12915-017-0353-y","title":"Nuclear genetic codes with a different meaning of the UAG and the UAA codon","year":2017,"lang":"en","type":"article","venue":"BMC Biology","topic":"Protist diversity and phylogeny","field":"Biochemistry, Genetics and Molecular Biology","cited_by":39,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canadian Institute for Advanced Research; Dalhousie University","funders":"Natural Sciences and Engineering Research Council of Canada; Agricultural Research Service; Grantová Agentura České Republiky; Mississippi State University; U.S. Department of Agriculture","keywords":"Biology; Genetic code; Stop codon; Genetics; Codon usage bias; Genome; Phylogenetic tree; ENCODE; Lineage (genetic); Evolutionary biology; Gene","score_opus":0.01263876090280281,"score_gpt":0.21673992915789222,"score_spread":0.20410116825508942,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2588638903","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97417825,0.0030632599,0.016758192,0.00029126578,0.00022947187,0.000020800835,0.00090121926,0.0003675202,0.0041901753],"genre_scores_gemma":[0.98104376,0.0006582813,0.014895999,0.00024812415,0.000074726304,0.000029941202,0.0013966318,0.00012683691,0.0015257517],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997321,0.000028346543,0.000022226657,0.00011109196,0.0000666877,0.000039477443],"domain_scores_gemma":[0.9990651,0.00015026946,0.00034080326,0.00021134174,0.00012905677,0.000103379105],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00017224556,0.0003220955,0.0003082058,0.00041241857,0.00042477503,0.0008353119,0.00024402307,0.0005038276,0.0011469235],"category_scores_gemma":[0.0007728825,0.0001268606,0.00039666137,0.0006450677,0.00073704286,0.0003403427,0.00042426802,0.0008528007,0.00057037553],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00038535698,0.000020963676,0.011008208,0.00018090315,0.000043242002,0.0011686553,0.00025040697,0.00024283565,0.97103757,0.0030720497,0.00025124513,0.012338582],"study_design_scores_gemma":[0.000084676285,0.0011923843,0.12483649,0.00035847237,0.00046403712,0.017104754,0.0013205138,0.0059961905,0.72379285,0.009683644,0.11494466,0.0002213737],"about_ca_topic_score_codex":0.00035048538,"about_ca_topic_score_gemma":0.0007378285,"teacher_disagreement_score":0.0011469235,"about_ca_system_score_codex":0.00037228424,"about_ca_system_score_gemma":0.0003408923,"threshold_uncertainty_score":0.0038368106},"labels":[],"label_agreement":null},{"id":"W2588955044","doi":"10.1186/s12915-017-0349-7","title":"Enhancing circadian clock function in cancer cells inhibits tumor growth","year":2017,"lang":"en","type":"article","venue":"BMC Biology","topic":"Circadian rhythm and melatonin","field":"Neuroscience","cited_by":181,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Hôpital Maisonneuve-Rosemont; McGill University; Douglas Mental Health University Institute","funders":"Fonds de Recherche du Québec - Santé; Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research; U.S. Department of Veterans Affairs","keywords":"Biology; Circadian rhythm; Circadian clock; Function (biology); Cancer; Cell biology; Cancer research; Cancer cell; Neuroscience; Genetics","score_opus":0.0400708683430772,"score_gpt":0.28802446648897617,"score_spread":0.24795359814589896,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2588955044","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9866333,0.006575371,0.0035604206,0.00022853437,0.0001993029,0.00005086022,0.00041460956,0.00030428052,0.002033191],"genre_scores_gemma":[0.9935221,0.0023426532,0.0019422536,0.000061331404,0.000018789624,0.000039762428,0.00031947097,0.00002420469,0.0017294436],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99989307,0.000015328766,0.00001134774,0.000023592915,0.000025504625,0.000031159107],"domain_scores_gemma":[0.99989235,0.00001638724,0.000031235668,0.000017576414,0.00000930639,0.000033182274],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013373118,0.0002575775,0.00029582763,0.00013482913,0.00013650426,0.00023397693,0.00020511405,0.00017872266,0.0012102212],"category_scores_gemma":[0.00011866639,0.00006570361,0.00016615471,0.00017938715,0.00019582681,0.00011489557,0.00015555222,0.0005508473,0.00030732495],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00025612215,0.0000795224,0.00026581384,0.00008457047,0.000007101814,0.000021201391,0.000012503549,0.00012474484,0.99445313,0.00012588146,0.00015025461,0.004419184],"study_design_scores_gemma":[0.000044038414,0.00091597385,0.0027870098,0.000009078399,0.000018623723,0.000104383624,0.000022763554,0.00081723987,0.98968035,0.000044226803,0.0055524763,0.0000038309086],"about_ca_topic_score_codex":0.0006482951,"about_ca_topic_score_gemma":0.0015405341,"teacher_disagreement_score":0.0012102212,"about_ca_system_score_codex":0.00031355696,"about_ca_system_score_gemma":0.00039375815,"threshold_uncertainty_score":0.004048586},"labels":[],"label_agreement":null},{"id":"W2592152157","doi":"10.1186/s12915-017-0350-1","title":"Structural basis for potency differences between GDF8 and GDF11","year":2017,"lang":"en","type":"article","venue":"BMC Biology","topic":"TGF-β signaling in diseases","field":"Biochemistry, Genetics and Molecular Biology","cited_by":122,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"National Institute of Diabetes and Digestive and Kidney Diseases; National Institute of General Medical Sciences; National Institute on Aging; College of Engineering, Michigan State University; Michigan State University; National Cancer Institute; National Institutes of Health; American Heart Association; Canadian Institutes of Health Research; University of Cincinnati; National Health and Medical Research Council; Muscular Dystrophy Association; National Institute of Arthritis and Musculoskeletal and Skin Diseases; Medical Research Council","keywords":"Biology; Potency; Computational biology; Basis (linear algebra); Genetics; Cell biology; In vitro","score_opus":0.04692759347444724,"score_gpt":0.31624069540129107,"score_spread":0.2693131019268438,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2592152157","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99544454,0.00050452416,0.0023193816,0.00010872615,0.000020724268,0.000012462524,0.00012838077,0.000027581924,0.0014337113],"genre_scores_gemma":[0.99673694,0.00022511045,0.0017749835,0.000060667335,0.000005365243,0.000010678366,0.00028301764,0.000011349092,0.0008918545],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.999918,0.000013849073,0.0000064414126,0.000018500818,0.000021712234,0.00002154074],"domain_scores_gemma":[0.9998828,0.00002489688,0.00003132863,0.000010315145,0.000017302415,0.000033287062],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015090677,0.00029698314,0.00015831571,0.000102383005,0.00014226206,0.00031599615,0.00035469985,0.00028708472,0.0027433503],"category_scores_gemma":[0.00020060784,0.000118480726,0.0002443071,0.0000676768,0.00023581991,0.00016885856,0.00019141633,0.00047230843,0.0006521953],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00041736537,0.00004829298,0.0014915735,0.000052811778,0.000020230356,0.00020289297,0.000030302446,0.00064306415,0.99423414,0.00088461133,0.00011423978,0.0018605344],"study_design_scores_gemma":[0.000090082736,0.00031737832,0.008784366,0.000013587767,0.00004151319,0.001247053,0.00008701368,0.0032863999,0.9806145,0.00038391905,0.0051191454,0.0000150228125],"about_ca_topic_score_codex":0.0005709972,"about_ca_topic_score_gemma":0.00056141184,"teacher_disagreement_score":0.0027433503,"about_ca_system_score_codex":0.0003513041,"about_ca_system_score_gemma":0.00021905806,"threshold_uncertainty_score":0.009177446},"labels":[],"label_agreement":null},{"id":"W2608711219","doi":"10.1186/s12915-017-0370-x","title":"Fin modules: an evolutionary perspective on appendage disparity in basal vertebrates","year":2017,"lang":"en","type":"article","venue":"BMC Biology","topic":"Developmental Biology and Gene Regulation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":36,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université du Québec à Rimouski","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Fin; Biology; Appendage; Fish fin; Modularity (biology); Dorsal fin; Evolutionary biology; Supertree; Phylogenetic tree; Anatomy; Fish <Actinopterygii>; Genetics; Dorsum; Gene","score_opus":0.018211615539509507,"score_gpt":0.3052393639684442,"score_spread":0.2870277484289347,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2608711219","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9390844,0.023889353,0.012760995,0.0016312567,0.000081828744,0.000031743897,0.0002386505,0.000043764696,0.022237994],"genre_scores_gemma":[0.9899138,0.004662947,0.0043838345,0.00014412076,0.000097142634,0.0000124524595,0.00011248578,0.000012185294,0.0006610822],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9996025,0.00008830508,0.000021929218,0.00015132819,0.000061293154,0.00007477],"domain_scores_gemma":[0.99941254,0.00016161347,0.00018398702,0.00003160708,0.00009821254,0.00011208001],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008469009,0.00038493556,0.0004151521,0.0028453073,0.0011758708,0.0013684632,0.00075133285,0.00090128486,0.004026033],"category_scores_gemma":[0.001176218,0.00015762824,0.00028522112,0.0022500171,0.002759514,0.0023257856,0.0018214857,0.0009513408,0.00034294298],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00052309444,0.00014134633,0.50139916,0.0012721681,0.00024374525,0.0022680343,0.015299981,0.003169978,0.07998877,0.07724491,0.0013903923,0.3170584],"study_design_scores_gemma":[0.00001327856,0.00055892696,0.94114447,0.00038981007,0.00011844491,0.0031383103,0.006104748,0.0038056255,0.0020883782,0.027131971,0.015444308,0.000061728926],"about_ca_topic_score_codex":0.0013826276,"about_ca_topic_score_gemma":0.00274792,"teacher_disagreement_score":0.004026033,"about_ca_system_score_codex":0.00069376244,"about_ca_system_score_gemma":0.00040027726,"threshold_uncertainty_score":0.013468385},"labels":[],"label_agreement":null},{"id":"W2625347301","doi":"10.1186/s12915-017-0397-z","title":"Evolution of strigolactone receptors by gradual neo-functionalization of KAI2 paralogues","year":2017,"lang":"en","type":"article","venue":"BMC Biology","topic":"Plant Parasitism and Resistance","field":"Agricultural and Biological Sciences","cited_by":138,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta; University of British Columbia","funders":"Royal Society; Ambrose Monell Foundation","keywords":"Strigolactone; Biology; Receptor; Cell biology; Genetics; Gene; Arabidopsis; Mutant","score_opus":0.02622867198346115,"score_gpt":0.24534607495708247,"score_spread":0.2191174029736213,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2625347301","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99713314,0.00041134012,0.001258679,0.00003310902,0.000005381922,0.0000087100425,0.00019428747,0.000032892367,0.00092248444],"genre_scores_gemma":[0.9953751,0.00031568698,0.002124698,0.00008183149,0.000010504849,0.000019464636,0.00086797855,0.000043959044,0.0011607562],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998834,0.00000913938,0.000009347989,0.00004064882,0.00003110097,0.000026426966],"domain_scores_gemma":[0.9996294,0.000066525165,0.000114451854,0.0000500931,0.000052250274,0.000087425506],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00019713333,0.00031591693,0.00023872622,0.000628796,0.0002623236,0.0005718825,0.00039523482,0.0004110689,0.0010036038],"category_scores_gemma":[0.0002548951,0.00021654095,0.00031724194,0.00040881967,0.00034224303,0.00037515452,0.00057895464,0.0006133807,0.00079058664],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00019085668,0.000022565551,0.008881851,0.00004201391,0.000016608765,0.00023358218,0.000091703296,0.00016206435,0.98625666,0.0002235036,0.000029355648,0.0038493162],"study_design_scores_gemma":[0.000076128264,0.0004879446,0.5743264,0.000043828528,0.00015681927,0.007179658,0.0006289716,0.006434251,0.3857088,0.0007236016,0.024158629,0.00007487241],"about_ca_topic_score_codex":0.00033435252,"about_ca_topic_score_gemma":0.0005085752,"teacher_disagreement_score":0.0010036038,"about_ca_system_score_codex":0.00046935576,"about_ca_system_score_gemma":0.00018822354,"threshold_uncertainty_score":0.0034054518},"labels":[],"label_agreement":null},{"id":"W2735774951","doi":"10.1186/s12915-017-0398-y","title":"C. elegans SUP-46, an HNRNPM family RNA-binding protein that prevents paternally-mediated epigenetic sterility","year":2017,"lang":"en","type":"article","venue":"BMC Biology","topic":"Genetics, Aging, and Longevity in Model Organisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":9,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Hospital for Sick Children; Mount Sinai Hospital; Lunenfeld-Tanenbaum Research Institute","funders":"Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research; Genome Canada; Ontario Genomics; Canada's Michael Smith Genome Sciences Centre; National Institutes of Health; Ontario Genomics Institute","keywords":"Biology; Epigenetics; Genetics; RNA; Gene; Chromatin; Germline; Non-coding RNA; RNA-binding protein","score_opus":0.042618291163548164,"score_gpt":0.2866377188420784,"score_spread":0.24401942767853024,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2735774951","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9928599,0.00096317154,0.0029575764,0.00009171292,0.00005705321,0.000045634166,0.0009937307,0.00026186425,0.0017693123],"genre_scores_gemma":[0.98979926,0.0005322207,0.0042244983,0.000080129925,0.000009329518,0.000035799087,0.0012525169,0.00006875768,0.003997453],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999094,0.000007953453,0.000010026435,0.000027178885,0.000028266879,0.000017218726],"domain_scores_gemma":[0.9998703,0.00001751776,0.00003903192,0.000013984914,0.000013553067,0.000045661407],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00011310597,0.00042400698,0.00016262766,0.00017269436,0.00016154365,0.00016884794,0.00028343443,0.0003066793,0.0013362456],"category_scores_gemma":[0.00009693304,0.00012959697,0.00017440741,0.000063559455,0.00027986307,0.00011719573,0.00018333738,0.00038825668,0.00038107642],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006119527,0.00001624502,0.00010617236,0.000028157196,0.0000036240008,0.000044218978,0.0000029924379,0.000048394122,0.99895465,0.000037813406,0.00004461899,0.0006519996],"study_design_scores_gemma":[0.000020287427,0.0002613688,0.0040402953,0.000013269883,0.000016481126,0.00026326856,0.00001031029,0.0010896128,0.9917066,0.000023929453,0.0025498425,0.000004747021],"about_ca_topic_score_codex":0.0008677577,"about_ca_topic_score_gemma":0.0015610631,"teacher_disagreement_score":0.0013362456,"about_ca_system_score_codex":0.0002729737,"about_ca_system_score_gemma":0.00024836694,"threshold_uncertainty_score":0.0044701695},"labels":[],"label_agreement":null},{"id":"W2752254298","doi":"10.1186/s12915-017-0417-z","title":"Blob-ology and biology of cryo-EM: an interview with Helen Saibil","year":2017,"lang":"en","type":"article","venue":"BMC Biology","topic":"Advanced Electron Microscopy Techniques and Applications","field":"Biochemistry, Genetics and Molecular Biology","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"Medical Research Council; Wellcome Trust","keywords":"Biology; Evolutionary biology; Computational biology","score_opus":0.03366515192326998,"score_gpt":0.38481283517349857,"score_spread":0.3511476832502286,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2752254298","genre_codex":"commentary","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.005165323,0.04008321,0.0018563572,0.93513346,0.01286421,0.00006302039,0.00009833197,0.00004831194,0.004687934],"genre_scores_gemma":[0.12628603,0.10419542,0.009393692,0.67952263,0.017547267,0.00042735625,0.0002551951,0.00055576407,0.061816648],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99353325,0.0038522047,0.00019187522,0.0004892246,0.0011205348,0.00081292866],"domain_scores_gemma":[0.9881891,0.0047514746,0.00034659097,0.00016932035,0.0021475242,0.00439594],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.015491782,0.0008566484,0.0010539317,0.0012582258,0.0061729806,0.005232278,0.001530659,0.007117104,0.0045660813],"category_scores_gemma":[0.021367792,0.00095862884,0.0007254432,0.00095359667,0.007709431,0.008350955,0.0056680106,0.020863608,0.0016139776],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00021147676,0.00023432155,0.0012212357,0.00045754647,0.000028590803,0.0019281502,0.065413535,0.0005723412,0.0023355565,0.012684523,0.86627334,0.048639342],"study_design_scores_gemma":[0.00002352261,0.00012024072,0.0010764025,0.0008942868,0.000009665867,0.0021010581,0.04506276,0.00029515882,0.00041950887,0.006279274,0.9436364,0.00008172116],"about_ca_topic_score_codex":0.0075565544,"about_ca_topic_score_gemma":0.008512997,"teacher_disagreement_score":0.015491782,"about_ca_system_score_codex":0.008430406,"about_ca_system_score_gemma":0.00574025,"threshold_uncertainty_score":0.081929386},"labels":[],"label_agreement":null},{"id":"W2754852449","doi":"10.1186/s12915-017-0423-1","title":"Antibiotic resistance: it’s bad, but why isn’t it worse?","year":2017,"lang":"en","type":"review","venue":"BMC Biology","topic":"Antibiotic Resistance in Bacteria","field":"Biochemistry, Genetics and Molecular Biology","cited_by":91,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"Canadian Institutes of Health Research; Canada Research Chairs","keywords":"Biology; Antibiotic resistance; Antibiotics; Bacteria; Resistance (ecology); Drug resistance; Microbiology; Biotechnology; Ecology; Genetics","score_opus":0.0848757770595869,"score_gpt":0.37369063630078936,"score_spread":0.2888148592412024,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2754852449","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00006865044,0.9952336,0.00013672758,0.0026469894,0.0007207852,0.0000018324408,0.000015426203,0.00001146107,0.0011646376],"genre_scores_gemma":[0.0008214781,0.99631387,0.00015712333,0.0012275846,0.0005392278,0.0000026788514,0.000025444295,0.000003849553,0.0009087316],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99958235,0.00008761503,0.000052613428,0.00006893359,0.00016166497,0.0000467672],"domain_scores_gemma":[0.99894625,0.000518437,0.00012673369,0.00003968057,0.00026195621,0.00010702399],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00078545633,0.0007469769,0.001239319,0.001746363,0.00043703435,0.0018727311,0.0010498086,0.0023518375,0.0045796665],"category_scores_gemma":[0.001753752,0.00023595555,0.0005547823,0.0018854988,0.0013159899,0.0027144072,0.00094450614,0.0035457332,0.0034022469],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000046438436,0.00003570079,0.00023167368,0.011123701,0.00007470916,0.00017903245,0.000116319236,0.00019559497,0.0010126308,0.009934218,0.0907192,0.88633084],"study_design_scores_gemma":[0.0000039397987,0.00002084255,0.00031304057,0.0028905615,0.00003265749,0.000854932,0.00008303701,0.000030638457,0.00016802292,0.0036372521,0.9919539,0.0000112830685],"about_ca_topic_score_codex":0.0010724049,"about_ca_topic_score_gemma":0.0020668486,"teacher_disagreement_score":0.0045796665,"about_ca_system_score_codex":0.0010478871,"about_ca_system_score_gemma":0.001574631,"threshold_uncertainty_score":0.01532048},"labels":[],"label_agreement":null},{"id":"W2766157034","doi":"10.1186/s12915-017-0432-0","title":"Membrane dynamics and organelle biogenesis—lipid pipelines and vesicular carriers","year":2017,"lang":"en","type":"article","venue":"BMC Biology","topic":"Lipid Membrane Structure and Behavior","field":"Biochemistry, Genetics and Molecular Biology","cited_by":91,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; SickKids Foundation; Montreal Neurological Institute and Hospital; Hospital for Sick Children; University of Toronto","funders":"National Institute of Neurological Disorders and Stroke; National Institute of General Medical Sciences; National Institute on Drug Abuse; Biotechnology and Biological Sciences Research Council; Canadian Institutes of Health Research; Genentech; National Institutes of Health; Centre National de la Recherche Scientifique; Francis Crick Institute; KU Leuven; University of Toronto; Weill Cornell Medical College; Fonds Wetenschappelijk Onderzoek; Hospital for Sick Children; Wellcome Trust; McGill University; Cancer Research UK; Yale University; Medical Research Council; Howard Hughes Medical Institute","keywords":"Organelle; Biology; Biogenesis; Vesicular transport protein; Organelle biogenesis; Cell biology; Vesicle; Membrane contact site; Membrane protein; Membrane; Biochemistry; Integral membrane protein","score_opus":0.011356204890920103,"score_gpt":0.2592039835361882,"score_spread":0.24784777864526808,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2766157034","genre_codex":"review","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.06786702,0.72529525,0.090970986,0.07491332,0.006822513,0.000043530636,0.00069003477,0.00093781203,0.03245953],"genre_scores_gemma":[0.44789815,0.49559492,0.02291979,0.005181263,0.006253624,0.00008028342,0.00047133057,0.00030302777,0.021297622],"study_design_codex":"theoretical_or_conceptual","study_design_gemma":"theoretical_or_conceptual","domain_scores_codex":[0.99962854,0.00006432444,0.00001957572,0.00009933761,0.00011634251,0.000071880124],"domain_scores_gemma":[0.9995716,0.00012344355,0.000079574915,0.000039901734,0.00008724838,0.00009816655],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00092806603,0.00042518362,0.0008515165,0.00094294787,0.0010294615,0.0036593943,0.00083595444,0.0017425325,0.0029825226],"category_scores_gemma":[0.0011858321,0.00033921463,0.00038477415,0.0008691322,0.0023487892,0.009715604,0.0022256717,0.002094528,0.0011000099],"study_design_candidate":"theoretical_or_conceptual","study_design_consensus":"theoretical_or_conceptual","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00018462603,0.000036043904,0.0013808958,0.0014050545,0.000067424924,0.0005090563,0.0011234862,0.0033881355,0.1075437,0.6974918,0.03103339,0.15583643],"study_design_scores_gemma":[0.000020212787,0.00014533858,0.0033352785,0.0006778336,0.000043620577,0.0010310925,0.0014339001,0.008861476,0.038622502,0.55548584,0.3901942,0.00014869681],"about_ca_topic_score_codex":0.00053385465,"about_ca_topic_score_gemma":0.0006080414,"teacher_disagreement_score":0.0036593943,"about_ca_system_score_codex":0.0013668428,"about_ca_system_score_gemma":0.0007974314,"threshold_uncertainty_score":0.0099775195},"labels":[],"label_agreement":null},{"id":"W2773938460","doi":"10.1186/s12915-017-0460-9","title":"On causal roles and selected effects: our genome is mostly junk","year":2017,"lang":"en","type":"article","venue":"BMC Biology","topic":"Evolution and Genetic Dynamics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":42,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Biology; Genome; Natural selection; Evolutionary biology; Lungfish; Function (biology); Selection (genetic algorithm); Genetics; Fish <Actinopterygii>; Gene","score_opus":0.007974023162558167,"score_gpt":0.2748601354572878,"score_spread":0.26688611229472964,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2773938460","genre_codex":"commentary","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.16899754,0.11136453,0.26348832,0.28639185,0.0076659108,0.00012138168,0.0017338458,0.000953196,0.15928338],"genre_scores_gemma":[0.85591584,0.033483665,0.024599703,0.06039421,0.006461416,0.00017028216,0.00068122474,0.00049111765,0.017802468],"study_design_codex":"theoretical_or_conceptual","study_design_gemma":"theoretical_or_conceptual","domain_scores_codex":[0.99440455,0.00209623,0.00025784227,0.0018923958,0.00097503647,0.0003739595],"domain_scores_gemma":[0.97139615,0.022436414,0.0013053704,0.0030376774,0.0011942696,0.00063013635],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.013660169,0.00096875505,0.0015507687,0.0019667353,0.0020816976,0.005209264,0.0020256466,0.0037738823,0.012066499],"category_scores_gemma":[0.027033987,0.0005463819,0.0010189556,0.0013991299,0.024459824,0.011968731,0.0036304903,0.0052647367,0.0014029338],"study_design_candidate":"theoretical_or_conceptual","study_design_consensus":"theoretical_or_conceptual","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00036253477,0.00003686047,0.0089452425,0.00059868494,0.0004052004,0.00091302523,0.0020075266,0.0012764431,0.0025033313,0.92459434,0.0073717185,0.050985035],"study_design_scores_gemma":[0.000044694414,0.000032301046,0.004589503,0.00023535696,0.00011305579,0.00033049905,0.000661064,0.00092170935,0.0008267146,0.9717852,0.020407354,0.00005255156],"about_ca_topic_score_codex":0.0034467916,"about_ca_topic_score_gemma":0.0026933288,"teacher_disagreement_score":0.013660169,"about_ca_system_score_codex":0.0021497328,"about_ca_system_score_gemma":0.0011741152,"threshold_uncertainty_score":0.07224274},"labels":[],"label_agreement":null},{"id":"W2782373699","doi":"10.1186/s12915-018-0499-2","title":"A phylogenomic framework and timescale for comparative studies of tunicates","year":2018,"lang":"en","type":"article","venue":"BMC Biology","topic":"Marine Ecology and Invasive Species","field":"Environmental Science","cited_by":238,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal","funders":"Centre National de la Recherche Scientifique; Agence Nationale de la Recherche; Université de Sherbrooke; Centre Méditerranéen de l’Environnement et de la Biodiversité; Laboratoire d'Excellence TULIP; Ministère de l'Économie, de la Science et de l'Innovation - Québec; Compute Canada","keywords":"Biology; Chordate; Phylogenetic tree; Vertebrate; Evolutionary biology; Phylogenetics; Clade; Tunicate; Ciona; Ciona intestinalis; Lineage (genetic); Deuterostome; Molecular clock; Sister group; Gene; Paleontology; Genetics","score_opus":0.11518361398657169,"score_gpt":0.37018287089936086,"score_spread":0.2549992569127892,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2782373699","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.31455228,0.015103905,0.64199686,0.0028559295,0.00020247334,0.0003481378,0.012307761,0.0019492704,0.010683311],"genre_scores_gemma":[0.688586,0.0045674457,0.29104954,0.00039732244,0.00023520424,0.0008597262,0.012699061,0.00058960787,0.0010161201],"study_design_codex":"theoretical_or_conceptual","study_design_gemma":"observational","domain_scores_codex":[0.9988385,0.00043830054,0.00006516204,0.0004594656,0.000091003305,0.00010768535],"domain_scores_gemma":[0.9969344,0.0013917865,0.00051984005,0.00038630606,0.00031599702,0.00045169186],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0036302113,0.00076268194,0.00093696057,0.005258487,0.0013077086,0.002924815,0.0010579651,0.00089380617,0.0036854409],"category_scores_gemma":[0.009139752,0.00046622526,0.0011447769,0.0054234727,0.0012989022,0.002594173,0.002964779,0.0015013653,0.0006443003],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00096082204,0.00022749336,0.21897617,0.002220478,0.0014511336,0.0016042354,0.005508176,0.0626055,0.07752165,0.37521008,0.009795288,0.24391899],"study_design_scores_gemma":[0.00008250318,0.00038120628,0.22148927,0.0007109585,0.00061633246,0.0016122537,0.0035771034,0.23984993,0.003891871,0.43764377,0.08998147,0.00016333771],"about_ca_topic_score_codex":0.0031513043,"about_ca_topic_score_gemma":0.0018575682,"teacher_disagreement_score":0.005258487,"about_ca_system_score_codex":0.0015874141,"about_ca_system_score_gemma":0.0012351725,"threshold_uncertainty_score":0.019198596},"labels":[],"label_agreement":null},{"id":"W2783278032","doi":"10.1186/s12915-017-0476-1","title":"Will human influences on evolutionary dynamics in the wild pervade the Anthropocene?","year":2018,"lang":"en","type":"review","venue":"BMC Biology","topic":"Species Distribution and Climate Change","field":"Environmental Science","cited_by":152,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta; Université de Sherbrooke","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Biology; Anthropocene; Dynamics (music); Environmental ethics; Evolutionary biology; Ecology","score_opus":0.09048295028512277,"score_gpt":0.3606754979412303,"score_spread":0.27019254765610756,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2783278032","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00009685027,0.9982712,0.000050668375,0.0008573106,0.00021515922,8.1499115e-7,0.000009960319,0.0000026539165,0.00049532583],"genre_scores_gemma":[0.0010200485,0.99819356,0.00005241251,0.00029113024,0.00025296438,0.0000016812054,0.000010543772,9.824844e-7,0.00017671149],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9997689,0.0000629959,0.00002787437,0.00005368766,0.000058789796,0.00002782184],"domain_scores_gemma":[0.99883586,0.00078655145,0.00013131251,0.000032540953,0.00015330524,0.000060316797],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009536631,0.00070897926,0.000987942,0.001744393,0.00045193377,0.0014827084,0.00090011087,0.0020957114,0.0038691484],"category_scores_gemma":[0.0020292858,0.00025230844,0.00058905437,0.0021653788,0.0013521075,0.0025995516,0.0009498897,0.0020160608,0.0010760378],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000047806145,0.000023275425,0.0008163402,0.025443101,0.0001780812,0.00017330007,0.00045095876,0.00047676996,0.00043878236,0.015468386,0.024665734,0.93181753],"study_design_scores_gemma":[0.0000058025976,0.000043880555,0.0030844323,0.011951697,0.0001527939,0.00056791754,0.0004234027,0.000064228254,0.00013507399,0.008581403,0.9749619,0.000027450036],"about_ca_topic_score_codex":0.0027597398,"about_ca_topic_score_gemma":0.004635536,"teacher_disagreement_score":0.0038691484,"about_ca_system_score_codex":0.00083021587,"about_ca_system_score_gemma":0.0016616653,"threshold_uncertainty_score":0.012943566},"labels":[],"label_agreement":null},{"id":"W2790719061","doi":"10.1186/s12915-018-0492-9","title":"A sophisticated, differentiated Golgi in the ancestor of eukaryotes","year":2018,"lang":"en","type":"article","venue":"BMC Biology","topic":"Protist diversity and phylogeny","field":"Biochemistry, Genetics and Molecular Biology","cited_by":49,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"Natural Sciences and Engineering Research Council of Canada; National Institute of Environmental Health Sciences; Alberta Innovates; Grantová Agentura České Republiky; Ministerstvo Školství, Mládeže a Tělovýchovy","keywords":"Biology; Ancestor; Golgi apparatus; Evolutionary biology; Genetics; Cell biology; Computational biology; Cell","score_opus":0.03094883542583171,"score_gpt":0.2801633887546445,"score_spread":0.24921455332881282,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2790719061","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98801965,0.0043362533,0.0055770106,0.00019181024,0.00001781138,0.000016368023,0.00040895384,0.000080889964,0.0013513322],"genre_scores_gemma":[0.98368526,0.0029739726,0.01157748,0.00010605825,0.000013771588,0.000011284874,0.0008258356,0.000021966214,0.0007844861],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998665,0.000009744374,0.000009918094,0.00006205262,0.000026119564,0.000025659203],"domain_scores_gemma":[0.9997547,0.000026854601,0.00009127269,0.000028863062,0.00004374232,0.000054559503],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00016777139,0.0003038722,0.00035168362,0.00077261106,0.0008156718,0.00090169976,0.00032327865,0.00064558955,0.00063617365],"category_scores_gemma":[0.0002677571,0.00022082987,0.00021091824,0.0008507866,0.00077739713,0.0010072873,0.00090544217,0.0005642295,0.0002851341],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00043059993,0.000053204327,0.053236425,0.0006448972,0.000062346604,0.0016333429,0.001217854,0.0006639945,0.9133881,0.0043300297,0.00021050728,0.024128722],"study_design_scores_gemma":[0.00005872471,0.0008197533,0.7565918,0.00043926985,0.00035536606,0.017952511,0.0035970008,0.0035150067,0.1344572,0.013638278,0.06841393,0.00016114797],"about_ca_topic_score_codex":0.0013976796,"about_ca_topic_score_gemma":0.0019504739,"teacher_disagreement_score":0.0013976796,"about_ca_system_score_codex":0.0005161559,"about_ca_system_score_gemma":0.00055713643,"threshold_uncertainty_score":0.0037450194},"labels":[],"label_agreement":null},{"id":"W2795286036","doi":"10.1186/s12915-018-0486-7","title":"A software tool ‘CroCo’ detects pervasive cross-species contamination in next generation sequencing data","year":2018,"lang":"en","type":"article","venue":"BMC Biology","topic":"Genomics and Phylogenetic Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":113,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal","funders":"Biotechnology and Biological Sciences Research Council; Directorate for Biological Sciences; Institut Universitaire de France; Agence Nationale de la Recherche","keywords":"Contamination; Biology; Transcriptome; Computational biology; Software; Multiplex; Bioinformatics; Computer science; Genetics; Gene; Ecology","score_opus":0.12636634211622028,"score_gpt":0.31309376257104354,"score_spread":0.18672742045482327,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2795286036","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.022318795,0.00057839695,0.54867834,0.0005249869,0.00053596834,0.00058063853,0.019534074,0.40454307,0.0027056334],"genre_scores_gemma":[0.07995241,0.00037444307,0.7971511,0.0017384299,0.00019356003,0.0031370549,0.04645633,0.06820602,0.002790657],"study_design_codex":"not_applicable","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9951981,0.0010967283,0.000590563,0.0016769088,0.0011343649,0.0003033326],"domain_scores_gemma":[0.9779694,0.013143515,0.0031106293,0.0030348878,0.0021718715,0.0005696792],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.01019169,0.0033660769,0.002160883,0.005497165,0.0016148606,0.0033563375,0.0025034943,0.002738374,0.013575615],"category_scores_gemma":[0.036845718,0.0017452128,0.0026597716,0.002609183,0.0014502069,0.0029057998,0.0035824738,0.0036615003,0.006273284],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00421156,0.000712567,0.049414888,0.008643904,0.0039600953,0.0020522685,0.0030116807,0.012936837,0.20803812,0.01265798,0.38571838,0.30864167],"study_design_scores_gemma":[0.0010610442,0.00088334584,0.056968022,0.0013142887,0.001122232,0.0039031531,0.0006265324,0.24862117,0.2674526,0.02633441,0.39039075,0.0013224877],"about_ca_topic_score_codex":0.00192991,"about_ca_topic_score_gemma":0.003483489,"teacher_disagreement_score":0.013575615,"about_ca_system_score_codex":0.0009332991,"about_ca_system_score_gemma":0.0029784164,"threshold_uncertainty_score":0.053899467},"labels":[],"label_agreement":null},{"id":"W2796337742","doi":"10.1186/s12915-018-0554-z","title":"Real-time tracking of complex ubiquitination cascades using a fluorescent confocal on-bead assay","year":2018,"lang":"en","type":"article","venue":"BMC Biology","topic":"Ubiquitin and proteasome pathways","field":"Biochemistry, Genetics and Molecular Biology","cited_by":12,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute for Research in Immunology and Cancer; Université de Montréal; Lunenfeld-Tanenbaum Research Institute; Mount Sinai Hospital","funders":"Medical Research Council; FP7 Research infrastructures; Wellcome Trust; Wellcome","keywords":"Ubiquitin; Biology; Proteasome; Cell biology; Enzyme; Biochemistry; Gene","score_opus":0.06207238580197239,"score_gpt":0.327318495577302,"score_spread":0.26524610977532964,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2796337742","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.5859769,0.001103445,0.40398386,0.000359934,0.00009409213,0.0004828669,0.0015273812,0.0019442082,0.00452729],"genre_scores_gemma":[0.56916034,0.0014313702,0.42179295,0.0002168541,0.000052252246,0.0009364087,0.0013070587,0.00012539815,0.0049774116],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99885225,0.00015015209,0.00006722399,0.00041807737,0.00035314256,0.00015910516],"domain_scores_gemma":[0.99941206,0.00017292282,0.00011256081,0.00009919645,0.00012937299,0.00007380215],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007429414,0.0007801957,0.00058243657,0.0005966506,0.0004071896,0.00067311514,0.001129854,0.001064168,0.0018844203],"category_scores_gemma":[0.00049259793,0.00033877528,0.0005824166,0.0004266642,0.0006204028,0.0004533499,0.0006747353,0.0010603262,0.00082229543],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009331733,0.00005039578,0.00032907588,0.000053957167,0.00001277824,0.00003217987,0.000020386587,0.00047203962,0.9957444,0.00027143882,0.00015852362,0.002761373],"study_design_scores_gemma":[0.000008770458,0.00009192383,0.0010966233,0.000004061222,0.000013887068,0.00008068464,0.000011012175,0.01232216,0.9851621,0.00006933602,0.0011221343,0.00001731558],"about_ca_topic_score_codex":0.0015644542,"about_ca_topic_score_gemma":0.0023446477,"teacher_disagreement_score":0.0018844203,"about_ca_system_score_codex":0.001447251,"about_ca_system_score_gemma":0.00071098976,"threshold_uncertainty_score":0.01050055},"labels":[],"label_agreement":null},{"id":"W2800771698","doi":"10.1186/s12915-018-0509-4","title":"Madagascar ground gecko genome analysis characterizes asymmetric fates of duplicated genes","year":2018,"lang":"en","type":"article","venue":"BMC Biology","topic":"Developmental Biology and Gene Regulation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":65,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Institute of Genetics; RIKEN","keywords":"Biology; Gecko; Genome; Gene; Evolutionary biology; Genetics; Genomics; Gene density; Repertoire; Computational biology; Genome evolution; Ecology","score_opus":0.013188206270226668,"score_gpt":0.2606436409129653,"score_spread":0.24745543464273867,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2800771698","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9980034,0.0002670762,0.00042139838,0.000014341967,0.000001548374,0.000004056525,0.0008953554,0.000016256554,0.00037654227],"genre_scores_gemma":[0.99330443,0.00023930472,0.002048738,0.000042625114,0.0000028235681,0.000017304981,0.0040143607,0.000019060384,0.00031134905],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999435,0.000003716363,0.0000036814688,0.000029218081,0.000009231587,0.000010669622],"domain_scores_gemma":[0.9998777,0.000033172175,0.00004990848,0.000013661876,0.000009900052,0.000015642638],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000067601075,0.00019274157,0.0001755061,0.0007108898,0.00033855395,0.00029685063,0.0001350869,0.00020532636,0.0010072922],"category_scores_gemma":[0.00020231493,0.00009689912,0.00023247594,0.0007948251,0.00021320951,0.00014573496,0.00038480954,0.00023460553,0.00013902414],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00039402672,0.000016579006,0.077288985,0.00023472201,0.0000794901,0.0006827084,0.0006545169,0.00045797654,0.9080654,0.00026414348,0.00016982714,0.01169173],"study_design_scores_gemma":[0.0000071769286,0.00006604005,0.97761494,0.000022058397,0.00009168246,0.00092208054,0.00029958575,0.0009694617,0.016296322,0.00013775419,0.0035619754,0.000010838368],"about_ca_topic_score_codex":0.0017330693,"about_ca_topic_score_gemma":0.0061562704,"teacher_disagreement_score":0.0017330693,"about_ca_system_score_codex":0.00015787868,"about_ca_system_score_gemma":0.00011767454,"threshold_uncertainty_score":0.003445983},"labels":[],"label_agreement":null},{"id":"W2801635219","doi":"10.1186/s12915-018-0510-y","title":"Correction to: A sophisticated, differentiated Golgi in the ancestor of eukaryotes","year":2018,"lang":"en","type":"erratum","venue":"BMC Biology","topic":"Protist diversity and phylogeny","field":"Biochemistry, Genetics and Molecular Biology","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"Biology; Ancestor; Most recent common ancestor; GRASP; Evolutionary biology; Taxon; Genetics; Phylogenetics; Paleontology; Gene; Computer science; History; Archaeology","score_opus":0.02416301674656464,"score_gpt":0.27361280498237667,"score_spread":0.24944978823581204,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2801635219","genre_codex":"editorial","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00034428455,0.0009811794,0.0010455045,0.034834437,0.9595779,0.000017689432,0.0008242912,0.0003593494,0.002015384],"genre_scores_gemma":[0.030000642,0.010988942,0.012433764,0.0823508,0.6440628,0.00014389446,0.0038924925,0.0026875043,0.21343905],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99801755,0.00024423774,0.0003966764,0.00038878957,0.00076756976,0.00018511295],"domain_scores_gemma":[0.98714036,0.0031229714,0.0009128005,0.0007925176,0.007246464,0.0007848952],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0019081163,0.002115765,0.0012472473,0.0024809453,0.0022905467,0.0023994744,0.002656107,0.00455924,0.040408775],"category_scores_gemma":[0.026554808,0.0008915815,0.0011031554,0.0012665222,0.0021268104,0.0022381842,0.0017705187,0.008662512,0.023511516],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000057650337,0.000010327426,0.00015097369,0.00016530172,0.000015661522,0.00076387735,0.000056371828,0.0000686571,0.00017186165,0.0010595388,0.9869893,0.0104904855],"study_design_scores_gemma":[0.000032373082,0.000027093593,0.0008901125,0.0002666631,0.000033160075,0.0023537625,0.000079056736,0.00020283293,0.0006137063,0.001489242,0.9939731,0.000039035058],"about_ca_topic_score_codex":0.009175702,"about_ca_topic_score_gemma":0.01011265,"teacher_disagreement_score":0.040408775,"about_ca_system_score_codex":0.0025157195,"about_ca_system_score_gemma":0.0029784206,"threshold_uncertainty_score":0.13518077},"labels":[],"label_agreement":null},{"id":"W2807047524","doi":"10.1186/s12915-018-0526-3","title":"Altering cortical input unmasks synaptic phenotypes in the YAC128 cortico-striatal co-culture model of Huntington disease","year":2018,"lang":"en","type":"article","venue":"BMC Biology","topic":"Genetic Neurodegenerative Diseases","field":"Neuroscience","cited_by":18,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hospital for Sick Children; BC Children's Hospital; University of British Columbia","funders":"Canadian Institutes of Health Research; University of British Columbia","keywords":"Medium spiny neuron; Biology; Striatum; Neuroscience; Huntington's disease; Huntingtin; Dendritic spine; Phenotype; Mutant; In vivo; Transgene; Neurotransmission; Basal ganglia; Synapse; Cell biology; Gene; Central nervous system; Genetics; Disease; Pathology; Receptor; Hippocampal formation; Dopamine","score_opus":0.05837234806841471,"score_gpt":0.31726269456412337,"score_spread":0.25889034649570863,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2807047524","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9930239,0.00068212947,0.0024646309,0.00010182812,0.00006583735,0.00006519256,0.0011850276,0.00011588616,0.002295579],"genre_scores_gemma":[0.9872673,0.00072525674,0.0045592147,0.000056038818,0.000011125827,0.00021790781,0.0014588705,0.00009163537,0.0056125415],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9996505,0.00002091723,0.000037760798,0.00007457817,0.00015163928,0.00006467912],"domain_scores_gemma":[0.9996087,0.00005211006,0.0000915217,0.00006081277,0.000058211524,0.00012866296],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00023333088,0.00064969604,0.00073863904,0.00050251966,0.00040210594,0.0004912695,0.0007432332,0.0006639105,0.0017797914],"category_scores_gemma":[0.00020207258,0.00025983615,0.00041579473,0.000289052,0.00038511486,0.00026294583,0.0004984197,0.0017610546,0.0008679127],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011968688,0.00006257419,0.00016541286,0.000034248773,0.000009048249,0.00009681121,0.000027008135,0.00006977108,0.9987978,0.000072844465,0.00005698227,0.00048781998],"study_design_scores_gemma":[0.000032854754,0.0004708738,0.005739266,0.000025384239,0.00004090884,0.000595727,0.00006462631,0.001646269,0.98944914,0.000057097226,0.0018677466,0.000010018109],"about_ca_topic_score_codex":0.0020407457,"about_ca_topic_score_gemma":0.004805723,"teacher_disagreement_score":0.0020407457,"about_ca_system_score_codex":0.00057562796,"about_ca_system_score_gemma":0.0005576496,"threshold_uncertainty_score":0.005954027},"labels":[],"label_agreement":null},{"id":"W2807614295","doi":"10.1186/s12915-018-0537-0","title":"Proteasomal degradation competes with Mia40-mediated import into mitochondria","year":2018,"lang":"en","type":"letter","venue":"BMC Biology","topic":"Mitochondrial Function and Pathology","field":"Biochemistry, Genetics and Molecular Biology","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"Deutsche Forschungsgemeinschaft","keywords":"Intermembrane space; Biology; Mitochondrial intermembrane space; Ubiquitin; Proteasome; Cell biology; Cytosol; Mitochondrion; Proteolysis; Transport protein; Ubiquitin ligase; Biochemistry; Lysine; Amino acid","score_opus":0.014318535344129989,"score_gpt":0.2444960201457576,"score_spread":0.2301774848016276,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2807614295","genre_codex":"commentary","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.2091492,0.037093837,0.008737532,0.6649464,0.039592396,0.00017848524,0.0004919176,0.0013300283,0.038480192],"genre_scores_gemma":[0.74657935,0.01632398,0.004589192,0.15819359,0.025121639,0.00029063757,0.00045292702,0.00022772366,0.048220925],"study_design_codex":"not_applicable","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9986098,0.0003395834,0.00012360523,0.00018646984,0.00047440466,0.00026618567],"domain_scores_gemma":[0.9980818,0.0011761284,0.00023909488,0.00016256784,0.00018982594,0.00015063511],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0014821521,0.00056180713,0.00060904573,0.00023734909,0.0006221048,0.00089243706,0.0005262212,0.005839318,0.003062357],"category_scores_gemma":[0.0034235434,0.00023646091,0.00067846425,0.00020043271,0.000922992,0.00062978646,0.00065657526,0.0042754123,0.0026964045],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.004485881,0.00059556006,0.0054504704,0.0009392512,0.00025553856,0.041430287,0.0004351036,0.0007210773,0.3861246,0.03751114,0.413085,0.1089661],"study_design_scores_gemma":[0.0011116114,0.0017586763,0.0075400574,0.00023560254,0.00011141309,0.031694107,0.00025408616,0.0037017209,0.32858703,0.013934804,0.6109606,0.00011023413],"about_ca_topic_score_codex":0.00032953385,"about_ca_topic_score_gemma":0.00045279576,"teacher_disagreement_score":0.005839318,"about_ca_system_score_codex":0.0017793094,"about_ca_system_score_gemma":0.000331381,"threshold_uncertainty_score":0.01290983},"labels":[],"label_agreement":null},{"id":"W2810772799","doi":"10.1186/s12915-018-0538-z","title":"Unique sperm haplotypes are associated with phenotypically different sperm subpopulations in Astyanax fish","year":2018,"lang":"en","type":"article","venue":"BMC Biology","topic":"Reproductive biology and impacts on aquatic species","field":"Biochemistry, Genetics and Molecular Biology","cited_by":19,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"York University; National Science Foundation","keywords":"Biology; Sperm; Haplotype; Fish <Actinopterygii>; Genetics; Evolutionary biology; Zoology; Gene; Genotype; Fishery","score_opus":0.024290211453807904,"score_gpt":0.26993283689835273,"score_spread":0.24564262544454482,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2810772799","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9994795,0.000048501115,0.00019715639,0.000008997003,0.0000011145244,0.000003214255,0.0001238628,0.00000701402,0.00013082768],"genre_scores_gemma":[0.99873465,0.000034780605,0.0005731501,0.000015869373,0.0000036428128,0.000015938003,0.0002225323,0.000008321514,0.0003910735],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99977905,0.000021554657,0.000030481646,0.00010039628,0.0000412768,0.000027295104],"domain_scores_gemma":[0.9993666,0.0001168322,0.0003458406,0.000039208935,0.000055955858,0.000075504795],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00020277784,0.00025850182,0.0002998441,0.0014144516,0.00051003543,0.00030355135,0.00030447362,0.00051879947,0.0023407903],"category_scores_gemma":[0.00036600986,0.00028169653,0.00021675002,0.00057736353,0.0004964962,0.0002160281,0.0006034065,0.0003429196,0.00019924145],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00043015383,0.00005073328,0.21564315,0.00008745675,0.00007735732,0.00033323013,0.00060627115,0.00019537508,0.7780347,0.0001248095,0.00005914393,0.004357678],"study_design_scores_gemma":[0.00001278464,0.00015920465,0.9905381,0.0000061900414,0.000042947373,0.0005612609,0.00018322577,0.00025823037,0.007914485,0.000102739665,0.00020392901,0.000016806855],"about_ca_topic_score_codex":0.0010788481,"about_ca_topic_score_gemma":0.0026900454,"teacher_disagreement_score":0.0023407903,"about_ca_system_score_codex":0.000217527,"about_ca_system_score_gemma":0.00017349832,"threshold_uncertainty_score":0.007830739},"labels":[],"label_agreement":null},{"id":"W2883000767","doi":"10.1186/s12915-018-0549-9","title":"Stable predictive markers for Phytophthora sojae avirulence genes that impair infection of soybean uncovered by whole genome sequencing of 31 isolates","year":2018,"lang":"en","type":"article","venue":"BMC Biology","topic":"Plant Pathogens and Resistance","field":"Agricultural and Biological Sciences","cited_by":39,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Agriculture and Agri-Food Canada; Université Laval","funders":"Agricultural Research Service; Canadian Field Crop Research Alliance; Agriculture and Agri-Food Canada; Empresa Brasileira de Pesquisa Agropecuária; Canada Research Chairs; Saskatchewan Pulse Growers; Genome Canada; Grain Farmers of Ontario; Western Grains Research Foundation; Université Laval; Fonds Québécois de la Recherche sur la Nature et les Technologies; Génome Québec; Oregon State University; Natural Sciences and Engineering Research Council of Canada; U.S. Department of Agriculture","keywords":"Phytophthora sojae; Biology; Oomycete; Genetics; Gene; Genome; Phenotype; Virulence; Population; Phytophthora; Botany","score_opus":0.02695500609666433,"score_gpt":0.23410737126766012,"score_spread":0.2071523651709958,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2883000767","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9936847,0.00029323815,0.0025044524,0.00002344267,0.000006743072,0.000027442515,0.003046407,0.000055786757,0.00035770034],"genre_scores_gemma":[0.9841846,0.00019574823,0.006170086,0.000046002806,0.0000052378196,0.000043266573,0.009019007,0.00004903437,0.00028695163],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99970824,0.000026169078,0.000024068482,0.00011164414,0.000083741776,0.00004607632],"domain_scores_gemma":[0.9995459,0.00011521192,0.00017657058,0.00004007621,0.00006569538,0.000056554472],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002733602,0.0005075127,0.00040941054,0.00060589897,0.00021704844,0.00040281744,0.00017788823,0.00034863234,0.00048996427],"category_scores_gemma":[0.0005600709,0.00019658411,0.0004905592,0.00059569965,0.0001969541,0.00013671932,0.00029286032,0.0004180512,0.00033937927],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00017260935,0.000033664655,0.027669122,0.00009294081,0.000044234814,0.00013554854,0.000118425145,0.00033532738,0.9676971,0.000025394116,0.00006171345,0.0036140678],"study_design_scores_gemma":[0.000025982754,0.00045942044,0.8276643,0.000040892242,0.0002668669,0.0015953066,0.0003457901,0.0066905175,0.15852702,0.00013787228,0.004208171,0.00003779542],"about_ca_topic_score_codex":0.0013598618,"about_ca_topic_score_gemma":0.0024816603,"teacher_disagreement_score":0.0013598618,"about_ca_system_score_codex":0.0002247624,"about_ca_system_score_gemma":0.00022250692,"threshold_uncertainty_score":0.002703905},"labels":[],"label_agreement":null},{"id":"W2887752836","doi":"10.1186/s12915-018-0605-5","title":"Common ancestry of heterodimerizing TALE homeobox transcription factors across Metazoa and Archaeplastida","year":2018,"lang":"en","type":"article","venue":"BMC Biology","topic":"Plant Molecular Biology Research","field":"Agricultural and Biological Sciences","cited_by":39,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"Natural Sciences and Engineering Research Council of Canada; Directorate for Biological Sciences; Division of Integrative Organismal Systems; Korea Carbon Capture and Sequestration R and D Center; Canadian Network for Research and Innovation in Machining Technology, Natural Sciences and Engineering Research Council of Canada; National Science Foundation; Ministry of Education, Science and Technology; Gordon and Betty Moore Foundation","keywords":"Biology; Homeobox; Multicellular organism; Transcription factor; Genetics; Ploidy; Homology (biology); Evolutionary biology; Gene; POU domain; Computational biology","score_opus":0.07697115246064302,"score_gpt":0.31609586788416427,"score_spread":0.23912471542352126,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2887752836","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9934663,0.0011483125,0.0035801942,0.000034446388,0.000008039501,0.000009423118,0.0004030985,0.0000998765,0.001250231],"genre_scores_gemma":[0.99603856,0.00033144082,0.0022919655,0.00003803633,0.000008250706,0.000012762684,0.0006451919,0.000024755693,0.00060898653],"study_design_codex":"bench_or_experimental","study_design_gemma":"theoretical_or_conceptual","domain_scores_codex":[0.9998349,0.000010231639,0.000011365772,0.000077242745,0.000036902307,0.0000293297],"domain_scores_gemma":[0.99981374,0.000028854472,0.00006763457,0.000019812713,0.000024873516,0.00004514746],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00018874923,0.00023483246,0.00029115682,0.0012537075,0.00063446246,0.00046268516,0.00021226694,0.00033481763,0.001269919],"category_scores_gemma":[0.00038261036,0.0001416952,0.00027686337,0.0008084941,0.00029805192,0.0003677038,0.0004404635,0.0002588935,0.00036342393],"study_design_candidate":"theoretical_or_conceptual","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006627496,0.00005769028,0.17642784,0.00048574872,0.00023489968,0.001121083,0.0013950974,0.0010614485,0.78300697,0.0016018975,0.00035809044,0.0335865],"study_design_scores_gemma":[0.000028146616,0.00027611543,0.9095551,0.00007927509,0.0003465431,0.0057634017,0.0017230724,0.00606649,0.05451236,0.0016237898,0.01994905,0.000076832526],"about_ca_topic_score_codex":0.0007169693,"about_ca_topic_score_gemma":0.0011534832,"teacher_disagreement_score":0.001269919,"about_ca_system_score_codex":0.0002411608,"about_ca_system_score_gemma":0.00020988609,"threshold_uncertainty_score":0.0042482615},"labels":[],"label_agreement":null},{"id":"W2890319686","doi":"10.1186/s12915-018-0570-z","title":"Heterogeneous combinatorial expression of Hoxd genes in single cells during limb development","year":2018,"lang":"en","type":"article","venue":"BMC Biology","topic":"Developmental Biology and Gene Regulation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":32,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"Université de Genève; Schweizerischer Nationalfonds zur Förderung der Wissenschaftlichen Forschung; Fonds National de la Recherche Luxembourg; École Polytechnique Fédérale de Lausanne","keywords":"Biology; Gene; Limb development; Expression (computer science); Gene expression; Computational biology; Cell biology; Genetics","score_opus":0.012141410134372534,"score_gpt":0.2380070711909475,"score_spread":0.22586566105657496,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2890319686","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99013966,0.0010177939,0.0072539635,0.000017344102,0.000005204069,0.000023245257,0.0006937863,0.000052342846,0.0007966901],"genre_scores_gemma":[0.9926354,0.00039744054,0.0050493605,0.00003548604,0.000006677715,0.000044082044,0.00108633,0.000022747045,0.00072252884],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99978703,0.0000143027155,0.000020847454,0.000068688394,0.00007587315,0.000033171],"domain_scores_gemma":[0.999726,0.000087095825,0.00006676671,0.000034346966,0.00003233456,0.000053525753],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015074712,0.000120275516,0.00025926996,0.000387815,0.0001742819,0.00047018935,0.00012224451,0.00017907168,0.00052671396],"category_scores_gemma":[0.00016731833,0.00015608128,0.00017312236,0.0003697523,0.00025014908,0.00015290752,0.0004352501,0.00026715122,0.00028535383],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000058276768,0.0000057900093,0.0053011025,0.000036862606,0.00000576868,0.000057141257,0.00003695543,0.0000981974,0.99264115,0.000055229135,0.00001425812,0.0016893775],"study_design_scores_gemma":[0.000013957256,0.00016692585,0.20077917,0.000017695542,0.00005947788,0.0011858843,0.00019841394,0.002643716,0.7917588,0.00025944776,0.0028993646,0.000017182623],"about_ca_topic_score_codex":0.00021096975,"about_ca_topic_score_gemma":0.0004848089,"teacher_disagreement_score":0.00052671396,"about_ca_system_score_codex":0.00027431367,"about_ca_system_score_gemma":0.0001372198,"threshold_uncertainty_score":0.0019903183},"labels":[],"label_agreement":null},{"id":"W2898020577","doi":"10.1186/s12915-018-0579-3","title":"Food perception without ingestion leads to metabolic changes and irreversible developmental arrest in C. elegans","year":2018,"lang":"en","type":"article","venue":"BMC Biology","topic":"Genetics, Aging, and Longevity in Model Organisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":25,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"National Institute of General Medical Sciences; School of Medicine, Duke University; National Institutes of Health","keywords":"Biology; Caenorhabditis elegans; Ingestion; Phenotype; Cell biology; Diapause; Gene; Genetics; Biochemistry; Larva; Ecology","score_opus":0.021968113015020357,"score_gpt":0.2620554483514718,"score_spread":0.24008733533645146,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2898020577","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9959531,0.00063283497,0.0007920583,0.00007860159,0.00004191797,0.000051362495,0.0009234309,0.00012375535,0.0014029597],"genre_scores_gemma":[0.99196285,0.00059896783,0.0016624397,0.00010105795,0.000009772847,0.000116951116,0.0011332383,0.000084263076,0.0043304614],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99982435,0.000009977871,0.000020548216,0.00004452359,0.000054976197,0.000045760353],"domain_scores_gemma":[0.99971324,0.000043398042,0.00009334929,0.000030838393,0.000030403664,0.000088841305],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00011387074,0.00074723,0.00031232357,0.00032494197,0.00032056097,0.00031031008,0.0004291156,0.00051715417,0.0014803389],"category_scores_gemma":[0.00013455338,0.0002880182,0.00039588133,0.00011228516,0.00031911596,0.0001833061,0.0004047675,0.0010238152,0.0004208162],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00005825376,0.00002987426,0.00008688837,0.00003596012,0.000002766552,0.000049981663,0.000007306272,0.00002900352,0.9993766,0.000020039863,0.000029339442,0.000274085],"study_design_scores_gemma":[0.000022381362,0.00049094536,0.010341042,0.000026356205,0.00001786022,0.00019471606,0.00003352511,0.00090003136,0.9865371,0.000026735763,0.0013947645,0.0000144713185],"about_ca_topic_score_codex":0.002481696,"about_ca_topic_score_gemma":0.0044558784,"teacher_disagreement_score":0.002481696,"about_ca_system_score_codex":0.000634321,"about_ca_system_score_gemma":0.0004490697,"threshold_uncertainty_score":0.004952252},"labels":[],"label_agreement":null},{"id":"W2898399302","doi":"10.1186/s12915-018-0586-4","title":"Evolving eukaryotes: an interview with Joel Dacks","year":2018,"lang":"en","type":"article","venue":"BMC Biology","topic":"Protist diversity and phylogeny","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of Alberta","funders":"National Institute of Environmental Health Sciences; Canada Research Chairs","keywords":"Biology; Diversity (politics); Constructive; Evolutionary biology; Environmental ethics; Anthropology; Process (computing); Sociology","score_opus":0.03094560165694396,"score_gpt":0.27540407521030996,"score_spread":0.244458473553366,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2898399302","genre_codex":"commentary","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0021739218,0.01349663,0.00035282125,0.9651198,0.012645485,0.000019707175,0.000040937037,0.0000206442,0.0061300592],"genre_scores_gemma":[0.05515325,0.021161823,0.0018409427,0.86934614,0.012307339,0.00012394773,0.000069491194,0.00019215533,0.03980491],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9921228,0.0042192903,0.00019416853,0.0006623944,0.0017061129,0.0010950689],"domain_scores_gemma":[0.9818824,0.008776771,0.0005392406,0.00020650942,0.0030903823,0.0055048093],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.01490212,0.0008839984,0.0010125359,0.0013473174,0.0154416375,0.008122461,0.0016227213,0.008067367,0.004323148],"category_scores_gemma":[0.028061245,0.0007301926,0.00061170774,0.0014340107,0.010775969,0.010575242,0.0055425134,0.026174452,0.0012407629],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000043882286,0.00005561543,0.0004814347,0.00010822321,0.0000113922815,0.0010421098,0.04765265,0.00013454283,0.0004974272,0.017219955,0.9211893,0.011563456],"study_design_scores_gemma":[0.00001116465,0.000034468478,0.0004033103,0.0002635595,0.000004935811,0.0008805012,0.04388254,0.00007502482,0.00013885538,0.0038113436,0.9504473,0.000046933576],"about_ca_topic_score_codex":0.021152927,"about_ca_topic_score_gemma":0.031279463,"teacher_disagreement_score":0.021152927,"about_ca_system_score_codex":0.011144424,"about_ca_system_score_gemma":0.009452684,"threshold_uncertainty_score":0.080858886},"labels":[],"label_agreement":null},{"id":"W2899973058","doi":"10.1186/s12915-018-0593-5","title":"Nuclear genome sequence of the plastid-lacking cryptomonad Goniomonas avonlea provides insights into the evolution of secondary plastids","year":2018,"lang":"en","type":"article","venue":"BMC Biology","topic":"Protist diversity and phylogeny","field":"Biochemistry, Genetics and Molecular Biology","cited_by":56,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canadian Institute for Advanced Research; Dalhousie University","funders":"Natural Sciences and Engineering Research Council of Canada; Agence Nationale de la Recherche; Simons Foundation","keywords":"Plastid; Endosymbiosis; Biology; Eukaryote; Nuclear gene; Genome; Chloroplast; Genetics; Evolutionary biology; Gene","score_opus":0.013468971473220894,"score_gpt":0.23218619562527093,"score_spread":0.21871722415205003,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2899973058","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9870996,0.0005726208,0.0024520988,0.00006771145,0.000015788964,0.000021064316,0.008290021,0.0000943113,0.0013869012],"genre_scores_gemma":[0.9631111,0.000679999,0.005563084,0.00006952818,0.000008034268,0.00003025668,0.028624024,0.00007091105,0.0018431876],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99995434,0.0000028079785,0.0000029936677,0.000016869913,0.0000111548,0.000011835658],"domain_scores_gemma":[0.99982977,0.000039307615,0.000040378352,0.00001669626,0.000029896732,0.0000439151],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000069383546,0.00034336775,0.00015644694,0.00033054705,0.00020226304,0.00023083354,0.00017192331,0.0003008311,0.0012815588],"category_scores_gemma":[0.00015687283,0.00009473314,0.0002860315,0.00042450163,0.00013198658,0.00015876786,0.000258874,0.000295091,0.0005343676],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00020930248,0.000019800502,0.005382922,0.00014396747,0.000013197502,0.00024786592,0.00010846971,0.00015422095,0.9891495,0.00009441266,0.00007844368,0.004397854],"study_design_scores_gemma":[0.00008176779,0.00088185334,0.68574136,0.00018062069,0.00024229792,0.004199957,0.0020273393,0.0035902443,0.26279545,0.0007809167,0.039401826,0.00007643717],"about_ca_topic_score_codex":0.0019914203,"about_ca_topic_score_gemma":0.0031808806,"teacher_disagreement_score":0.0019914203,"about_ca_system_score_codex":0.00021445913,"about_ca_system_score_gemma":0.000257592,"threshold_uncertainty_score":0.004287243},"labels":[],"label_agreement":null},{"id":"W2901604060","doi":"10.1186/s12915-018-0607-3","title":"Evolution of mitochondrial TAT translocases illustrates the loss of bacterial protein transport machines in mitochondria","year":2018,"lang":"en","type":"article","venue":"BMC Biology","topic":"Mitochondrial Function and Pathology","field":"Biochemistry, Genetics and Molecular Biology","cited_by":32,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University","funders":"European Regional Development Fund; Wissenschaftskolleg zu Berlin; Grantová Agentura, Univerzita Karlova; Biotechnology and Biological Sciences Research Council; Univerzita Karlova v Praze; Grantová Agentura České Republiky; Ministerstvo Školství, Mládeže a Tělovýchovy","keywords":"Biology; Translocase; Translocase of the inner membrane; Twin-arginine translocation pathway; Inner membrane; Mitochondrion; Transport protein; Cell biology; Mitochondrial membrane transport protein; Intermembrane space; Membrane transport protein; Biochemistry; Membrane protein; Bacterial outer membrane; Inner mitochondrial membrane; Gene; Escherichia coli; Membrane; Chromosomal translocation","score_opus":0.013317098465079152,"score_gpt":0.25124939715464384,"score_spread":0.2379322986895647,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2901604060","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9930386,0.0012387573,0.003792586,0.00011136914,0.000014553608,0.000011752748,0.00017790374,0.00006474871,0.0015497836],"genre_scores_gemma":[0.99517715,0.0006278957,0.0030607628,0.000029229339,0.0000069785415,0.000009538245,0.00031390056,0.000021704607,0.0007528916],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9998287,0.000018671979,0.000017903385,0.000052953936,0.000041584917,0.000040173472],"domain_scores_gemma":[0.9996705,0.00005170788,0.00010702919,0.00004595561,0.000057723322,0.0000671736],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00020892851,0.00027527413,0.00022050185,0.0004973562,0.00039,0.0007680763,0.00030634968,0.000653053,0.0004287842],"category_scores_gemma":[0.00031651053,0.000156726,0.00027928708,0.0004977249,0.0004763687,0.0004670506,0.0007544948,0.0007370376,0.00046247875],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00024901077,0.000031803054,0.008711006,0.000108849716,0.000014478857,0.00042121857,0.00017042091,0.0003422909,0.98107105,0.0014311341,0.000036895704,0.007411786],"study_design_scores_gemma":[0.000031200867,0.00048447732,0.1708817,0.00009072072,0.00013012864,0.007894957,0.00060146354,0.0050948765,0.7848149,0.0023827862,0.027518513,0.0000743429],"about_ca_topic_score_codex":0.00059710396,"about_ca_topic_score_gemma":0.0004924867,"teacher_disagreement_score":0.0008169121,"about_ca_system_score_codex":0.0008169121,"about_ca_system_score_gemma":0.0003303637,"threshold_uncertainty_score":0.0059271455},"labels":[],"label_agreement":null},{"id":"W2904192199","doi":"10.1186/s12915-018-0615-3","title":"Mitochondrial unfolded protein response transcription factor ATFS-1 promotes longevity in a long-lived mitochondrial mutant through activation of stress response pathways","year":2018,"lang":"en","type":"article","venue":"BMC Biology","topic":"Genetics, Aging, and Longevity in Model Organisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":131,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; McGill University Health Centre","funders":"National Institute of Diabetes and Digestive and Kidney Diseases; National Institute of General Medical Sciences; National Institute on Aging; National Institutes of Health; Van Andel Research Institute","keywords":"Biology; Proteostasis; Unfolded protein response; Downregulation and upregulation; Caenorhabditis elegans; Transcription factor; Mutant; Cell biology; Mitochondrion; Oxidative stress; Endocrinology; Genetics; Endoplasmic reticulum; Gene","score_opus":0.032770647196344295,"score_gpt":0.2744575230955464,"score_spread":0.2416868758992021,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2904192199","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9979049,0.00038057956,0.00096628186,0.000056723653,0.000016936889,0.000010425225,0.0003056464,0.00006058621,0.0002980148],"genre_scores_gemma":[0.99535453,0.0003019745,0.0020499,0.000043719534,0.000007680877,0.000028644778,0.0005201592,0.000028080934,0.00166535],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999118,0.000008103591,0.00001229105,0.000025432524,0.000024515106,0.000017834762],"domain_scores_gemma":[0.9997458,0.000022799197,0.0001100823,0.000019036093,0.000020350655,0.00008188013],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00011495628,0.00042933182,0.00023566888,0.00020933009,0.00018196381,0.00017798443,0.00022298882,0.00026256332,0.0010866295],"category_scores_gemma":[0.000082097315,0.0001261785,0.00023078095,0.000084162486,0.00024449025,0.00017486334,0.00025212183,0.0006078277,0.00019939424],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000047926136,0.000014469838,0.0001398575,0.000015669502,0.0000020918187,0.000020193278,0.0000040862506,0.000018387644,0.9995461,0.00001209322,0.000011052822,0.00016793417],"study_design_scores_gemma":[0.00001686706,0.00029541427,0.013166076,0.000015138941,0.00001839855,0.0002485447,0.000037129994,0.00078751985,0.9844305,0.000034616816,0.00094243,0.0000073359497],"about_ca_topic_score_codex":0.00034358405,"about_ca_topic_score_gemma":0.0008948841,"teacher_disagreement_score":0.0010866295,"about_ca_system_score_codex":0.00028235262,"about_ca_system_score_gemma":0.00016240515,"threshold_uncertainty_score":0.0036351085},"labels":[],"label_agreement":null},{"id":"W2912077631","doi":"10.1186/s12915-019-0626-8","title":"Transcriptome, proteome and draft genome of Euglena gracilis","year":2019,"lang":"en","type":"article","venue":"BMC Biology","topic":"Protist diversity and phylogeny","field":"Biochemistry, Genetics and Molecular Biology","cited_by":152,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"Medical Research Council; Cambridge Trust; Bundesministerium für Bildung und Forschung; Deutsches Zentrum für Luft- und Raumfahrt; Grantová Agentura České Republiky; European Research Council; University of Cambridge; Cambridge Philosophical Society; University of Dundee","keywords":"Biology; Euglena gracilis; Proteome; Transcriptome; Genome; Computational biology; Genetics; Gene; Gene expression; Chloroplast","score_opus":0.008504550150507035,"score_gpt":0.2140777812263422,"score_spread":0.20557323107583517,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2912077631","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.66311586,0.008019823,0.013142584,0.0010120063,0.00016106485,0.00025234275,0.30689523,0.0027019023,0.0046992046],"genre_scores_gemma":[0.26236787,0.004334529,0.03355451,0.00029353512,0.000051410367,0.00022529214,0.69277674,0.0006077119,0.0057883854],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99985147,0.0000102380955,0.00001656721,0.000054187625,0.00004338848,0.00002409816],"domain_scores_gemma":[0.99976784,0.000043623742,0.00006060498,0.00002857016,0.00005830253,0.00004108438],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00022387823,0.0008026804,0.0006001836,0.0010688718,0.000595264,0.0008341495,0.00047339493,0.00042953368,0.0024257149],"category_scores_gemma":[0.00045130507,0.00026155266,0.00079481787,0.0020369068,0.00017054935,0.00047006854,0.0005847026,0.0007300889,0.0016259567],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0011574107,0.000052648473,0.0045923493,0.001638146,0.000072014525,0.0006197809,0.00036985308,0.0010420353,0.9654989,0.00022738037,0.0028047753,0.021924652],"study_design_scores_gemma":[0.00025145593,0.0009950739,0.5001951,0.0006385105,0.0011896063,0.004480765,0.0010163251,0.010655277,0.32257295,0.0018239153,0.15596929,0.00021179153],"about_ca_topic_score_codex":0.0027279905,"about_ca_topic_score_gemma":0.0035527067,"teacher_disagreement_score":0.0027279905,"about_ca_system_score_codex":0.0005678472,"about_ca_system_score_gemma":0.00088537246,"threshold_uncertainty_score":0.008114755},"labels":[],"label_agreement":null},{"id":"W2929627743","doi":"10.1186/s12915-019-0634-8","title":"Oxygen induces the expression of invasion and stress response genes in the anaerobic salmon parasite Spironucleus salmonicida","year":2019,"lang":"en","type":"article","venue":"BMC Biology","topic":"Parasitic Infections and Diagnostics","field":"Immunology and Microbiology","cited_by":9,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University","funders":"Natural Sciences and Engineering Research Council of Canada; Stiftelsen för Strategisk Forskning; Dalhousie University; Svenska Forskningsrådet Formas; European Research Council; Uppsala Universitet; Vetenskapsrådet; Stiftelsen för Strategisk Forskning; European Molecular Biology Organization","keywords":"Biology; Transcriptome; Microbiology; Gene; Superoxide dismutase; Reactive oxygen species; Oxidative stress; Cell biology; Biochemistry; Gene expression","score_opus":0.01915304526660393,"score_gpt":0.26775197572752957,"score_spread":0.24859893046092563,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2929627743","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9980059,0.00042058705,0.00032019406,0.000050222043,0.000012582301,0.000009897138,0.00068890536,0.00002191297,0.00046965852],"genre_scores_gemma":[0.9942602,0.00030331677,0.0007902013,0.00013861303,0.000010490322,0.00004018886,0.0027992942,0.000015883328,0.0016416583],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99987674,0.0000110908,0.00000836571,0.000039614868,0.000023472328,0.00004072429],"domain_scores_gemma":[0.99985385,0.000024544355,0.000048085356,0.000008749089,0.000031116164,0.000033722525],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00010132811,0.00026337514,0.00023671763,0.00021292105,0.00016721945,0.00019888935,0.000085700456,0.00024397841,0.0008298525],"category_scores_gemma":[0.00014399558,0.00012287384,0.00022163373,0.00017854196,0.00016505002,0.00015342057,0.00036701164,0.00037542716,0.00025672358],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011219644,0.000013191277,0.0023606252,0.000046333324,0.0000032833302,0.0000290678,0.000040383326,0.000020494588,0.9968022,0.000010847413,0.000044862638,0.00051655446],"study_design_scores_gemma":[0.000050499188,0.0018128012,0.6505843,0.00006303164,0.00007630802,0.00040211657,0.0009720355,0.002063208,0.33949134,0.00020403486,0.0042537665,0.000026551375],"about_ca_topic_score_codex":0.0007166277,"about_ca_topic_score_gemma":0.00088494277,"teacher_disagreement_score":0.0008298525,"about_ca_system_score_codex":0.00018299141,"about_ca_system_score_gemma":0.00017971295,"threshold_uncertainty_score":0.0027760863},"labels":[],"label_agreement":null},{"id":"W2947792935","doi":"10.1186/s12915-019-0646-4","title":"Enabling cell-type-specific behavioral epigenetics in Drosophila: a modified high-yield INTACT method reveals the impact of social environment on the epigenetic landscape in dopaminergic neurons","year":2019,"lang":"en","type":"article","venue":"BMC Biology","topic":"Neurobiology and Insect Physiology Research","field":"Neuroscience","cited_by":30,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"York University","funders":"Howard Hughes Medical Institute","keywords":"Epigenetics; Biology; Dopaminergic; Transcription factor; Drosophila melanogaster; Neuroscience; Histone; Genetics; Phenotype; Gene; Dopamine","score_opus":0.08487198882600609,"score_gpt":0.3400565923327427,"score_spread":0.2551846035067366,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2947792935","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8314824,0.001744062,0.15872712,0.0004313673,0.000120239216,0.00034786464,0.0037300535,0.0008054692,0.0026114704],"genre_scores_gemma":[0.82927185,0.0016378466,0.15454336,0.00039411144,0.00003435664,0.00047680986,0.0057184696,0.00033149708,0.0075917],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998179,0.00001536779,0.000014323004,0.000073961084,0.000055112905,0.000023430805],"domain_scores_gemma":[0.99978465,0.000045722074,0.00006087878,0.00005138338,0.00002500398,0.000032374344],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00023695901,0.00049357367,0.00024800276,0.00027943464,0.00025345778,0.00030586493,0.0005000653,0.00037812872,0.0011286255],"category_scores_gemma":[0.00020480216,0.00030924391,0.00038280574,0.00011897626,0.00041969251,0.0002083671,0.00047178494,0.00079007715,0.00058837153],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000008360059,0.0000042479833,0.00013883729,0.000015972768,0.0000037433983,0.000011203447,0.000009329103,0.00002320319,0.9989126,0.000036865942,0.000021622618,0.000814082],"study_design_scores_gemma":[0.000008891983,0.00008613751,0.010050664,0.000006039422,0.000022459706,0.00021652345,0.000024986697,0.0010659619,0.9853918,0.00007523128,0.0030376492,0.000013652517],"about_ca_topic_score_codex":0.0012227072,"about_ca_topic_score_gemma":0.0041358434,"teacher_disagreement_score":0.0012227072,"about_ca_system_score_codex":0.00033135034,"about_ca_system_score_gemma":0.00026108677,"threshold_uncertainty_score":0.0037755966},"labels":[],"label_agreement":null},{"id":"W2952425397","doi":"10.1186/s12915-018-0480-0","title":"A genetically encoded Ca2+ indicator based on circularly permutated sea anemone red fluorescent protein eqFP578","year":2018,"lang":"en","type":"article","venue":"BMC Biology","topic":"Photoreceptor and optogenetics research","field":"Neuroscience","cited_by":139,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"National Institute of Neurological Disorders and Stroke; Canadian Institutes of Health Research; National Institutes of Health; University Hospital Foundation; University of Alberta; Alberta Innovates; Alberta Innovates - Health Solutions; Natural Sciences and Engineering Research Council of Canada; Fondation Brain Canada","keywords":"Biology; Green fluorescent protein; In vivo; Biophysics; Fluorescence; Cell biology; Sea anemone; Phototoxicity; Zebrafish; Fluorescent protein; Biochemistry; In vitro; Genetics; Gene","score_opus":0.05399001453806268,"score_gpt":0.32123825820063917,"score_spread":0.2672482436625765,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2952425397","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.962988,0.00076467136,0.032067776,0.0002153485,0.000050783172,0.00010585,0.0005481592,0.0004623708,0.002796993],"genre_scores_gemma":[0.9392318,0.00085767,0.053012017,0.0000983263,0.000007047422,0.00009061457,0.0010373513,0.00013165447,0.005533382],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998747,0.000011720353,0.000009225707,0.00004149417,0.000044703764,0.000018135206],"domain_scores_gemma":[0.9998271,0.000023919989,0.00005862631,0.000019229179,0.000036818317,0.00003435496],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00019498856,0.00038324812,0.00017621643,0.00019799116,0.00014146557,0.00030753925,0.00039350244,0.00049244234,0.00061115273],"category_scores_gemma":[0.00022274573,0.00014093092,0.00016109833,0.00016347982,0.0003966529,0.00032658892,0.0003128633,0.0004882135,0.0003949036],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00001174725,0.0000032505666,0.00007043882,0.0000137049465,0.0000013966985,0.000015314437,0.000005087047,0.000072238836,0.99897563,0.00006863069,0.000017777498,0.00074480823],"study_design_scores_gemma":[0.0000027849342,0.000037558482,0.00060183735,0.0000034170707,0.000004462872,0.00008281046,0.000006605447,0.0007062396,0.99682957,0.000013297245,0.0017066024,0.00000474535],"about_ca_topic_score_codex":0.0013489479,"about_ca_topic_score_gemma":0.0015983057,"teacher_disagreement_score":0.0013489479,"about_ca_system_score_codex":0.000669523,"about_ca_system_score_gemma":0.0003643102,"threshold_uncertainty_score":0.0048577785},"labels":[],"label_agreement":null},{"id":"W2961972373","doi":"10.1186/s12915-019-0675-z","title":"RNA processing errors triggered by cadmium and integrator complex disruption are signals for environmental stress","year":2019,"lang":"en","type":"article","venue":"BMC Biology","topic":"RNA Research and Splicing","field":"Biochemistry, Genetics and Molecular Biology","cited_by":35,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"Natural Sciences and Engineering Research Council of Canada; University of Minnesota; National Institutes of Health; National Science Foundation","keywords":"Biology; Environmental stress; Integrator; Cadmium; RNA; Rna processing; Computational biology; Cell biology; Genetics; Ecology; Computer science; Telecommunications; Gene","score_opus":0.021852634574347975,"score_gpt":0.2969833285814324,"score_spread":0.2751306940070844,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2961972373","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9949604,0.0008786403,0.0025398708,0.00010849764,0.000059401307,0.000027602526,0.00042130033,0.00020474453,0.0007994078],"genre_scores_gemma":[0.99541074,0.0003446348,0.0021630498,0.00008816276,0.0000108051145,0.00003289203,0.00052502996,0.00003507494,0.0013896713],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99976665,0.000024106896,0.000020300913,0.000072825,0.0000801785,0.00003592441],"domain_scores_gemma":[0.9997019,0.00005906194,0.00014280448,0.000029707327,0.000020717905,0.00004580496],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00016079417,0.00038893777,0.0002456991,0.0002277656,0.00021347254,0.00028418232,0.00025274156,0.0004691788,0.0015058009],"category_scores_gemma":[0.00022382937,0.00017269535,0.0002415474,0.00012865149,0.00031179728,0.00017797052,0.0003354964,0.0004812936,0.00030886],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008337429,0.000010751722,0.00035635318,0.000023856126,0.0000039204906,0.00006811095,0.000004206056,0.00003700943,0.99903667,0.000026431218,0.000036816065,0.00031247488],"study_design_scores_gemma":[0.000009429752,0.00010238852,0.014532525,0.0000063370694,0.000013283378,0.00034499657,0.000014365523,0.0006320686,0.98359483,0.000041934014,0.0007024535,0.0000054851134],"about_ca_topic_score_codex":0.00045610848,"about_ca_topic_score_gemma":0.0010190455,"teacher_disagreement_score":0.0015058009,"about_ca_system_score_codex":0.00045833908,"about_ca_system_score_gemma":0.0001679457,"threshold_uncertainty_score":0.0050373673},"labels":[],"label_agreement":null},{"id":"W2967229049","doi":"10.1186/s12915-019-0684-y","title":"MARPLE, a point-of-care, strain-level disease diagnostics and surveillance tool for complex fungal pathogens","year":2019,"lang":"en","type":"article","venue":"BMC Biology","topic":"Wheat and Barley Genetics and Pathology","field":"Agricultural and Biological Sciences","cited_by":123,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Agriculture and Agri-Food Canada","funders":"Biotechnology and Biological Sciences Research Council; Consortium of International Agricultural Research Centers; Ethiopian Institute of Agricultural Research; Oxford Nanopore Technologies; John Innes Foundation; Directorate for Biological Sciences; Aarhus Universitet","keywords":"Biology; Strain (injury); Disease; Microbiology; Internal medicine","score_opus":0.04062480473422078,"score_gpt":0.25104084660202136,"score_spread":0.21041604186780058,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2967229049","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.28770435,0.008269635,0.66685563,0.0021681127,0.00043287408,0.00091199076,0.0044172104,0.019392252,0.009847928],"genre_scores_gemma":[0.32389536,0.0025930386,0.6595587,0.0010780253,0.00016909177,0.0005730926,0.0028291587,0.0006524878,0.008651068],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99846256,0.0002747423,0.00005243434,0.00049799436,0.0006262568,0.00008594593],"domain_scores_gemma":[0.99855775,0.0004569117,0.00038493914,0.00019679865,0.00019885864,0.00020463137],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010848101,0.0011924715,0.00073970406,0.0015512835,0.0003501342,0.0016513334,0.0009685221,0.0018906434,0.0028248418],"category_scores_gemma":[0.0016689895,0.0005871111,0.0006107553,0.00039012605,0.00048383453,0.0014779586,0.0013589911,0.001626007,0.0020935487],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001558632,0.00010095997,0.0020845062,0.00021616158,0.000025880614,0.00018182625,0.00009360765,0.0003030465,0.9421273,0.00052724325,0.0012753417,0.052908316],"study_design_scores_gemma":[0.000040992996,0.0009865322,0.008612972,0.00008928718,0.00009506874,0.004047325,0.00013827923,0.0132060265,0.9366763,0.0007110084,0.03526376,0.00013252531],"about_ca_topic_score_codex":0.00020201807,"about_ca_topic_score_gemma":0.0006030015,"teacher_disagreement_score":0.0028248418,"about_ca_system_score_codex":0.00028780138,"about_ca_system_score_gemma":0.00030284055,"threshold_uncertainty_score":0.009450018},"labels":[],"label_agreement":null},{"id":"W2968665392","doi":"10.1186/s12915-019-0685-x","title":"Synthetic Biology Goes Cell-Free","year":2019,"lang":"en","type":"review","venue":"BMC Biology","topic":"CRISPR and Genetic Engineering","field":"Biochemistry, Genetics and Molecular Biology","cited_by":142,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Canadian Institutes of Health Research; International Development Research Centre","keywords":"Synthetic biology; Biology; Systems biology; Scope (computer science); Key (lock); Computational biology; Biochemical engineering; Nanotechnology; Computer science; Ecology; Engineering","score_opus":0.03155118434071593,"score_gpt":0.3794506449125352,"score_spread":0.3478994605718193,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2968665392","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0002665142,0.9821525,0.0024223053,0.0026291495,0.0022042168,0.000010608975,0.000056277437,0.0000544508,0.0102038905],"genre_scores_gemma":[0.0038514123,0.9835082,0.0015401837,0.0023999675,0.00091836357,0.000021519836,0.000097842254,0.000030626194,0.0076318174],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9995147,0.000086977656,0.00004381614,0.00011422927,0.00019141682,0.000048812148],"domain_scores_gemma":[0.9995704,0.00024834866,0.000040640436,0.0000359528,0.000072170194,0.00003239307],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00096009846,0.0011765234,0.0010321204,0.0013361552,0.00044237595,0.0021517088,0.00095283834,0.0018640956,0.0067154663],"category_scores_gemma":[0.00095914083,0.00047898735,0.0004670232,0.001148633,0.0021949867,0.0036701856,0.0015930095,0.0040854146,0.0063336077],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006230328,0.00007387291,0.00011782452,0.014948883,0.00007931288,0.00022136091,0.00025388715,0.0012827477,0.014185577,0.24596286,0.07375243,0.64905894],"study_design_scores_gemma":[0.0000029646624,0.0000151769345,0.000028188515,0.00059464236,0.000006381912,0.00014161083,0.00001647769,0.00004482293,0.00091080635,0.008169267,0.9900619,0.000007800169],"about_ca_topic_score_codex":0.000790489,"about_ca_topic_score_gemma":0.00090534776,"teacher_disagreement_score":0.0067154663,"about_ca_system_score_codex":0.0013910552,"about_ca_system_score_gemma":0.0014970589,"threshold_uncertainty_score":0.022465527},"labels":[],"label_agreement":null},{"id":"W2982704518","doi":"10.1186/s12915-019-0707-8","title":"Correction to: A genetically encoded Ca2+ indicator based on circularly permutated sea anemone red fluorescent protein eqFP578","year":2019,"lang":"en","type":"erratum","venue":"BMC Biology","topic":"Photoreceptor and optogenetics research","field":"Neuroscience","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"Biology; Sea anemone; Anemone; Fluorescence; Computational biology; Fluorescent protein; Evolutionary biology; Green fluorescent protein; Genetics; Gene; Ecology; Optics","score_opus":0.03797191934073647,"score_gpt":0.30821516983934405,"score_spread":0.2702432504986076,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2982704518","genre_codex":"editorial","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00042495684,0.0006125375,0.0033856325,0.026903259,0.9608695,0.000028466913,0.002485308,0.0011020188,0.0041882508],"genre_scores_gemma":[0.041674778,0.00740562,0.02918791,0.06979523,0.21509734,0.00037135626,0.015765956,0.010568555,0.61013323],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9971974,0.00028949176,0.00044916454,0.00047488714,0.0013606283,0.00022845846],"domain_scores_gemma":[0.9813129,0.0047296993,0.001040252,0.0012180228,0.010664389,0.0010347676],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0024862506,0.0023342962,0.0014667384,0.0027016555,0.0035500524,0.0026442371,0.0031969943,0.0054920055,0.11256492],"category_scores_gemma":[0.032614235,0.0011833987,0.001365777,0.0020092672,0.0020774642,0.0019959735,0.0022900857,0.008249047,0.053694565],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008923737,0.000013533366,0.000108266046,0.00016772316,0.000014136338,0.0005625726,0.000046381694,0.00009736257,0.0004118983,0.0013652256,0.9862364,0.010887201],"study_design_scores_gemma":[0.000046423993,0.0000281291,0.00057542254,0.00019716364,0.000037878744,0.0013077604,0.000069378206,0.00040327446,0.0014183514,0.0016050476,0.99426633,0.000044840304],"about_ca_topic_score_codex":0.0123836445,"about_ca_topic_score_gemma":0.015781917,"teacher_disagreement_score":0.11256492,"about_ca_system_score_codex":0.003068232,"about_ca_system_score_gemma":0.0036730743,"threshold_uncertainty_score":0.37656718},"labels":[],"label_agreement":null},{"id":"W2990104287","doi":"10.1186/s12915-019-0719-4","title":"Peripheral cathepsin L inhibition induces fat loss in C. elegans and mice through promoting central serotonin synthesis","year":2019,"lang":"en","type":"article","venue":"BMC Biology","topic":"Genetics, Aging, and Longevity in Model Organisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Office of Research Infrastructure Programs, National Institutes of Health; Institute of Genetics and Developmental Biology, Chinese Academy of Sciences; Institute of Biophysics, Chinese Academy of Sciences; Natural Science Foundation of Anhui Province; Institute of Genetics; National Natural Science Foundation of China; Yunnan University; National Institutes of Health; Chinese Academy of Sciences; University of Science and Technology of China","keywords":"Biology; Serotonin; Internal medicine; Endocrinology; Cathepsin L; Cathepsin; Serotonergic; Adipose tissue; Adipogenesis; Cell biology; Biochemistry; Enzyme; Receptor","score_opus":0.012347697863227857,"score_gpt":0.23976408561853427,"score_spread":0.2274163877553064,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2990104287","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9912185,0.0010855363,0.0023814552,0.0003174858,0.000082610895,0.000110378416,0.0022677532,0.00048250178,0.002053759],"genre_scores_gemma":[0.98656684,0.00082745065,0.0041082744,0.00021425667,0.000017824363,0.00034080853,0.0013669777,0.00011817683,0.0064394036],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99968684,0.000027276039,0.00004052248,0.000090838745,0.00006694695,0.0000876287],"domain_scores_gemma":[0.9995059,0.000055576886,0.00018397087,0.000044951557,0.000032616113,0.00017691328],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00024543665,0.00083988643,0.0003874102,0.00092881883,0.00038170742,0.00041995526,0.00051060994,0.0008333089,0.0025088727],"category_scores_gemma":[0.00021066361,0.00039295305,0.0006400727,0.00025266182,0.00074242364,0.0002645295,0.0003886105,0.001464541,0.0004446969],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0004062046,0.000118219104,0.00027435384,0.00007480807,0.000015300679,0.00009053279,0.00002581383,0.0001084974,0.997531,0.0001403651,0.0001297651,0.0010852228],"study_design_scores_gemma":[0.00019115732,0.0012950372,0.009716499,0.000060237053,0.000064828324,0.0002947703,0.000081990394,0.0028001657,0.98269767,0.0001448486,0.0026273793,0.000025498945],"about_ca_topic_score_codex":0.0019034494,"about_ca_topic_score_gemma":0.0041718963,"teacher_disagreement_score":0.0025088727,"about_ca_system_score_codex":0.0008554135,"about_ca_system_score_gemma":0.0004912885,"threshold_uncertainty_score":0.008393049},"labels":[],"label_agreement":null},{"id":"W2991467126","doi":"10.1186/s12915-019-0712-y","title":"Genomic insights from the first chromosome-scale assemblies of oat (Avena spp.) diploid species","year":2019,"lang":"en","type":"article","venue":"BMC Biology","topic":"Wheat and Barley Genetics and Pathology","field":"Agricultural and Biological Sciences","cited_by":91,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Agriculture and Agri-Food Canada","funders":"Brigham Young University; Biotechnology and Biological Sciences Research Council; U.S. Department of Agriculture; National Science Foundation","keywords":"Biology; Genome; Avena; Synteny; Ploidy; Retrotransposon; Genetics; Polyploid; Chromosome; Phylogenetic tree; Gene; Evolutionary biology; Botany; Transposable element","score_opus":0.02212582655567287,"score_gpt":0.2062417671980188,"score_spread":0.18411594064234593,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2991467126","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8583511,0.00525741,0.044932876,0.0004120167,0.00020751987,0.00023561683,0.08281546,0.0023204193,0.0054674987],"genre_scores_gemma":[0.6581398,0.002731748,0.12354184,0.00025957692,0.000083388484,0.00022669265,0.20851353,0.0013274029,0.0051759016],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998018,0.00001308461,0.000023138271,0.00008672595,0.000048165326,0.000027177151],"domain_scores_gemma":[0.999316,0.00015341872,0.00011054425,0.00008215069,0.00021271192,0.00012511345],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004125507,0.0006013603,0.0005236077,0.0015266299,0.0006638302,0.0009694226,0.00042779493,0.00045102573,0.0017979025],"category_scores_gemma":[0.0010839108,0.00036339986,0.00096374156,0.0014581333,0.00017885615,0.00053283485,0.0008197942,0.0007128827,0.00093222107],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00029995688,0.000034172994,0.008109023,0.00063309795,0.00011323165,0.0006001018,0.0007721525,0.001117162,0.96226126,0.00069245475,0.0014818367,0.023885446],"study_design_scores_gemma":[0.00015301343,0.00077623373,0.4789621,0.00063192693,0.0009899208,0.003543662,0.0018138633,0.025160955,0.29160312,0.0037587439,0.19238584,0.00022072693],"about_ca_topic_score_codex":0.005000158,"about_ca_topic_score_gemma":0.0117019955,"teacher_disagreement_score":0.005000158,"about_ca_system_score_codex":0.0006339324,"about_ca_system_score_gemma":0.00055774103,"threshold_uncertainty_score":0.009942055},"labels":[],"label_agreement":null},{"id":"W2997497753","doi":"10.1186/s12915-019-0728-3","title":"Evolutionary superscaffolding and chromosome anchoring to improve Anopheles genome assemblies","year":2020,"lang":"en","type":"article","venue":"BMC Biology","topic":"Genomics and Phylogenetic Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":89,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Simon Fraser University","funders":"National Human Genome Research Institute; Agricultural Research Service; Novartis Stiftung für Medizinisch-Biologische Forschung; National Institute of Allergy and Infectious Diseases; Natural Sciences and Engineering Research Council of Canada; Division of Intramural Research, National Institute of Allergy and Infectious Diseases; Schweizerischer Nationalfonds zur Förderung der Wissenschaftlichen Forschung; Agence Nationale de la Recherche; National Cancer Institute; National Institutes of Health; National Science Foundation","keywords":"Synteny; Biology; Comparative genomics; Chromosome; Genome; Computational biology; Anopheles; Anopheles stephensi; Genomics; Sequence assembly; Genetics; Gene; Ecology; Malaria","score_opus":0.02033183027790467,"score_gpt":0.24222654950452832,"score_spread":0.22189471922662365,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2997497753","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.49974364,0.0018132114,0.4880764,0.0004102679,0.00017640943,0.00039513764,0.002628339,0.0038114758,0.0029451414],"genre_scores_gemma":[0.32724202,0.0008580603,0.6603833,0.00019735849,0.00005097709,0.00028268434,0.007816708,0.0015748806,0.001593972],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99862397,0.00032410753,0.00015544266,0.00040245423,0.000362751,0.00013127325],"domain_scores_gemma":[0.99579227,0.0014746757,0.0005619933,0.00078892236,0.0012319437,0.00015026092],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0034576894,0.001352919,0.0009771301,0.0018048674,0.0008664341,0.0013988727,0.0009337229,0.0005592422,0.002520875],"category_scores_gemma":[0.00844425,0.00056207285,0.0013443354,0.0021186722,0.00047289408,0.0013435156,0.0011901985,0.0016959348,0.0018713198],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00063880504,0.00016306929,0.015196921,0.0010241146,0.0003362493,0.0004071978,0.0013694153,0.04356209,0.7865396,0.0031697166,0.0023388588,0.14525391],"study_design_scores_gemma":[0.000080606835,0.0005782227,0.027023893,0.00015712011,0.0006942339,0.00064712774,0.0005128828,0.2086924,0.7228502,0.004798913,0.03376294,0.0002014707],"about_ca_topic_score_codex":0.002969335,"about_ca_topic_score_gemma":0.0075399014,"teacher_disagreement_score":0.0034576894,"about_ca_system_score_codex":0.0007867923,"about_ca_system_score_gemma":0.0010809812,"threshold_uncertainty_score":0.018286288},"labels":[],"label_agreement":null},{"id":"W2998879414","doi":"10.1186/s12915-019-0732-7","title":"Optogenetic activation of parvalbumin and somatostatin interneurons selectively restores theta-nested gamma oscillations and oscillation-induced spike timing-dependent long-term potentiation impaired by amyloid β oligomers","year":2020,"lang":"en","type":"article","venue":"BMC Biology","topic":"Memory and Neural Mechanisms","field":"Neuroscience","cited_by":88,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"The Scarborough Hospital; University of Toronto","funders":"National Research Foundation of Korea; National Research Foundation; Medical Research Council; Korea Health Industry Development Institute; Human Frontier Science Program","keywords":"Optogenetics; Neuroscience; Interneuron; Long-term potentiation; Parvalbumin; Hippocampal formation; Biology; LTP induction; Excitatory postsynaptic potential; Inhibitory postsynaptic potential; Receptor","score_opus":0.11737956428806084,"score_gpt":0.3178461435042056,"score_spread":0.20046657921614475,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2998879414","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99669576,0.00016728001,0.0022807997,0.000033630597,0.000028356775,0.0000108388185,0.00013720259,0.000088535235,0.00055756175],"genre_scores_gemma":[0.9976088,0.00023327152,0.0010461711,0.000024549994,0.000004445813,0.000023354876,0.000087826986,0.000020252308,0.00095142063],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999404,0.0000026284508,0.0000064278597,0.000013135187,0.000014209325,0.000023245104],"domain_scores_gemma":[0.99992466,0.0000082515635,0.000025043568,0.000006314843,0.0000057300344,0.000029969768],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000047510213,0.00038909982,0.00023146144,0.00013144703,0.0001131066,0.00019650614,0.00027131574,0.00024918382,0.0006921154],"category_scores_gemma":[0.000057048805,0.00015997858,0.00027334248,0.00008825536,0.00022327773,0.00014512465,0.00019338715,0.0006685704,0.00014249366],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000052017967,0.000016603044,0.000057962978,0.000016131899,0.0000033359588,0.000029299394,0.00000610577,0.00011746804,0.9991486,0.000053877862,0.000012170065,0.0004863752],"study_design_scores_gemma":[0.000045563393,0.00034772808,0.005358595,0.000008201274,0.00003577802,0.00014613848,0.00004820648,0.00532028,0.98775476,0.00014419286,0.0007824412,0.000008082359],"about_ca_topic_score_codex":0.0008298727,"about_ca_topic_score_gemma":0.0011783952,"teacher_disagreement_score":0.0008298727,"about_ca_system_score_codex":0.0001967043,"about_ca_system_score_gemma":0.00021231936,"threshold_uncertainty_score":0.002315402},"labels":[],"label_agreement":null},{"id":"W3000255754","doi":"10.1186/s12915-020-0737-2","title":"Correction to: Common ancestry of heterodimerizing TALE homeobox transcription factors across Metazoa and Archaeplastida","year":2020,"lang":"en","type":"erratum","venue":"BMC Biology","topic":"Protist diversity and phylogeny","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"Biology; Homeobox; Genetics; Transcription factor; Evolutionary biology; Computational biology; HNF1B; Transcription (linguistics); Gene","score_opus":0.037298276512931584,"score_gpt":0.289332998110526,"score_spread":0.2520347215975944,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3000255754","genre_codex":"editorial","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00031602615,0.0010633455,0.001602451,0.032782495,0.95795524,0.000021621094,0.0012030446,0.00056117494,0.004494684],"genre_scores_gemma":[0.025850175,0.011760757,0.0136792585,0.06409549,0.3964304,0.00017600718,0.007274199,0.0049376036,0.47579604],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9971975,0.00033226883,0.00037760794,0.00043673936,0.0014357731,0.00021998354],"domain_scores_gemma":[0.9815113,0.0041862396,0.0009694977,0.0010784119,0.0111519825,0.0011025232],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0025070214,0.002096236,0.0012030842,0.003303281,0.0032074265,0.0030517988,0.0024437425,0.0034871357,0.0771116],"category_scores_gemma":[0.031259112,0.0009564183,0.0009414734,0.0020842645,0.0019194101,0.002134034,0.0021652407,0.007260626,0.046276357],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000042719614,0.000005308104,0.000091695925,0.00010800598,0.000007967595,0.00035291226,0.00003708516,0.000043918128,0.00014467537,0.0008159945,0.98897076,0.009378865],"study_design_scores_gemma":[0.000018550585,0.000015159675,0.00046292966,0.00019747342,0.000022235643,0.0011038278,0.00006909746,0.00015495077,0.00056126114,0.0011576256,0.99620855,0.000028327215],"about_ca_topic_score_codex":0.01106573,"about_ca_topic_score_gemma":0.013483738,"teacher_disagreement_score":0.0771116,"about_ca_system_score_codex":0.0025321564,"about_ca_system_score_gemma":0.0038347777,"threshold_uncertainty_score":0.25796402},"labels":[],"label_agreement":null},{"id":"W3003660938","doi":"10.1186/s12915-019-0731-8","title":"The round goby genome provides insights into mechanisms that may facilitate biological invasions","year":2020,"lang":"en","type":"article","venue":"BMC Biology","topic":"Animal Behavior and Reproduction","field":"Agricultural and Biological Sciences","cited_by":55,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"Schweizerischer Nationalfonds zur Förderung der Wissenschaftlichen Forschung","keywords":"Biology; Round goby; Goby; Neogobius; Evolutionary biology; Genome; Ecology; Gene duplication; Gene; Adaptation (eye); Gene family; Invasive species; Genetics; Fish <Actinopterygii>; Fishery; Neuroscience","score_opus":0.21245678157209444,"score_gpt":0.26154065116954234,"score_spread":0.0490838695974479,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3003660938","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97875756,0.0032255899,0.008598084,0.0005308066,0.000054233555,0.0000339631,0.0032891245,0.0005150854,0.0049955007],"genre_scores_gemma":[0.9703414,0.0017742555,0.015635151,0.00033269371,0.00004113384,0.000057141857,0.008238552,0.00014527675,0.0034344264],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9999132,0.0000069787634,0.0000034473958,0.000037659764,0.000016997246,0.000021630369],"domain_scores_gemma":[0.99973303,0.000077211895,0.00007972792,0.000029724915,0.00003132537,0.000048979742],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00017852936,0.0004666236,0.00032025887,0.00078581227,0.000552022,0.0005884041,0.000305422,0.0007469645,0.0025812553],"category_scores_gemma":[0.0005143064,0.00017748601,0.00045477043,0.00060942076,0.00042594102,0.00075855147,0.00060742546,0.0006945066,0.00063264894],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00041782018,0.000048269045,0.03834325,0.00057857705,0.00013720809,0.0015046764,0.00062152016,0.001240309,0.92696685,0.0028918467,0.0009804744,0.02626919],"study_design_scores_gemma":[0.000048932678,0.0004335056,0.809322,0.0002929975,0.00045450847,0.003118561,0.0015558507,0.007259864,0.07615267,0.0071568904,0.09407801,0.00012621004],"about_ca_topic_score_codex":0.0016825893,"about_ca_topic_score_gemma":0.0049524507,"teacher_disagreement_score":0.0025812553,"about_ca_system_score_codex":0.00041048307,"about_ca_system_score_gemma":0.00041019812,"threshold_uncertainty_score":0.008635223},"labels":[],"label_agreement":null},{"id":"W3012517325","doi":"10.1186/s12915-020-0741-6","title":"The draft nuclear genome sequence and predicted mitochondrial proteome of Andalucia godoyi, a protist with the most gene-rich and bacteria-like mitochondrial genome","year":2020,"lang":"en","type":"article","venue":"BMC Biology","topic":"Protist diversity and phylogeny","field":"Biochemistry, Genetics and Molecular Biology","cited_by":67,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Dalhousie University","funders":"Natural Sciences and Engineering Research Council of Canada; Fonds National de la Recherche Luxembourg; Fonds de recherche du Québec – Nature et technologies; Canadian Institutes of Health Research; Grantová Agentura České Republiky","keywords":"Biology; Protist; Genome; Mitochondrial DNA; Gene; Proteome; Genetics; Nuclear gene; Whole genome sequencing; Bacteria; Mitochondrion; Computational biology","score_opus":0.012646562061812238,"score_gpt":0.20737053784607148,"score_spread":0.19472397578425923,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3012517325","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.87993604,0.0055945576,0.024479376,0.0006341516,0.00021223216,0.00028129548,0.081485905,0.0014775153,0.005898965],"genre_scores_gemma":[0.67149985,0.0037978364,0.06467966,0.00017701414,0.000071032875,0.00031812905,0.25613979,0.00043455974,0.002882129],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.999863,0.000011890497,0.000016321721,0.000050272854,0.00004068895,0.000017768363],"domain_scores_gemma":[0.9996455,0.000076148644,0.000110981004,0.00002733514,0.000076082084,0.00006411962],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00021945148,0.00078421034,0.00047795178,0.001170762,0.00065340946,0.0008335639,0.0005915578,0.00046321648,0.0016366123],"category_scores_gemma":[0.0009243314,0.00019305553,0.0006304633,0.0011356437,0.00027692804,0.00038302844,0.00039693754,0.0005868878,0.00087366684],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0023060215,0.00013430606,0.04021777,0.0036692785,0.00020078126,0.0034371156,0.0017725603,0.0049496256,0.8900224,0.0013873503,0.0033534819,0.048549287],"study_design_scores_gemma":[0.00045454848,0.0012214556,0.4791423,0.0014269466,0.0020091408,0.007337937,0.0053636567,0.046761718,0.20671609,0.0036860255,0.24559769,0.00028246985],"about_ca_topic_score_codex":0.0049818135,"about_ca_topic_score_gemma":0.0072409823,"teacher_disagreement_score":0.0049818135,"about_ca_system_score_codex":0.00087973196,"about_ca_system_score_gemma":0.0013751509,"threshold_uncertainty_score":0.009905636},"labels":[],"label_agreement":null},{"id":"W3012529981","doi":"10.1186/s12915-020-0754-1","title":"Evolution of metabolic capabilities and molecular features of diplonemids, kinetoplastids, and euglenids","year":2020,"lang":"en","type":"article","venue":"BMC Biology","topic":"Protist diversity and phylogeny","field":"Biochemistry, Genetics and Molecular Biology","cited_by":77,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Victoria; University of British Columbia","funders":"Natural Sciences and Engineering Research Council of Canada; Russian Science Foundation; Ostravská Univerzita v Ostravě; Grantová Agentura České Republiky; Ministerstvo Školství, Mládeže a Tělovýchovy","keywords":"Biology; Protist; Evolutionary biology; Phylogenetics; Phylogenetic tree; Clade; Phylum; Protozoa; Parasitology; Eukaryote; Genetics; Zoology; Gene; Genome","score_opus":0.008612811331568387,"score_gpt":0.21345205644186155,"score_spread":0.20483924511029317,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3012529981","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99832433,0.00037483487,0.00016185651,0.0000151890035,0.000001467181,0.0000044032167,0.00050073024,0.0000058187625,0.0006113873],"genre_scores_gemma":[0.9981729,0.00026701431,0.00037853245,0.000012339872,0.0000032934688,0.000007011641,0.0009164763,0.0000052554747,0.00023712219],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9998523,0.000014264552,0.00001514413,0.00006765647,0.000025517329,0.000025093177],"domain_scores_gemma":[0.9994772,0.00008595808,0.00022031095,0.000040035986,0.00007142776,0.00010510622],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00020040078,0.00024330753,0.00020411942,0.0017370038,0.00038534036,0.00091819844,0.00030214898,0.00041532743,0.0011400627],"category_scores_gemma":[0.0005176229,0.00016723362,0.00021998065,0.0010572387,0.00042978002,0.0005373578,0.000630695,0.00032344018,0.00028625224],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0011503099,0.000047613135,0.30995765,0.00021091428,0.00014136908,0.00026919757,0.0009273081,0.00048437685,0.67494804,0.00043647081,0.000075797034,0.011350975],"study_design_scores_gemma":[0.000007854462,0.00009494963,0.99252856,0.000013316279,0.00003592866,0.00040341876,0.00035668802,0.00031388813,0.00504946,0.00012108474,0.001064857,0.000009902918],"about_ca_topic_score_codex":0.0013553377,"about_ca_topic_score_gemma":0.0014455781,"teacher_disagreement_score":0.0017370038,"about_ca_system_score_codex":0.00051373313,"about_ca_system_score_gemma":0.00021257336,"threshold_uncertainty_score":0.0038138628},"labels":[],"label_agreement":null},{"id":"W3013615095","doi":"10.1186/s12915-019-0708-7","title":"A straightforward approach for bioorthogonal labeling of proteins and organelles in live mammalian cells, using a short peptide tag","year":2020,"lang":"en","type":"article","venue":"BMC Biology","topic":"Click Chemistry and Applications","field":"Chemistry","cited_by":19,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Horizon 2020; University of Toronto; European Commission","keywords":"Bioorthogonal chemistry; Organelle; Biology; Protein tag; Epitope; Live cell imaging; Computational biology; Biochemistry; Peptide; Cell biology; Cytoplasm; Cell; Molecular biology; Fusion protein; Click chemistry; Genetics; Chemistry; Antibody; Gene; Combinatorial chemistry; Recombinant DNA","score_opus":0.0776595822524984,"score_gpt":0.2866603786219948,"score_spread":0.20900079636949637,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3013615095","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.21392706,0.0038296357,0.76825136,0.00092264067,0.0004019529,0.0009368485,0.0012820279,0.0013671163,0.009081291],"genre_scores_gemma":[0.38760692,0.0046541533,0.59155357,0.00094259146,0.00008957877,0.0009730827,0.0024789788,0.00015169584,0.011549324],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997353,0.000036048343,0.00001941662,0.000084785264,0.00008850744,0.000035827143],"domain_scores_gemma":[0.9998599,0.000034049674,0.00002950184,0.00003188048,0.000021121728,0.000023477485],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004996708,0.00061866594,0.00030778415,0.00038900322,0.0002687151,0.00039101386,0.0005125336,0.0009682808,0.0018541206],"category_scores_gemma":[0.00027407968,0.00024627746,0.00044470583,0.00032452864,0.000378772,0.00035727842,0.00053345965,0.0014360778,0.0013432475],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000013877499,0.000021854245,0.00003362324,0.000070831455,0.000006159601,0.00004599865,0.000013552731,0.00005069507,0.9958288,0.0005346109,0.00014031546,0.0032396873],"study_design_scores_gemma":[0.000012097808,0.00012992967,0.00025859152,0.000006678509,0.000013307589,0.0004921037,0.000008072739,0.0004278479,0.9875759,0.00030851192,0.010755793,0.000011212421],"about_ca_topic_score_codex":0.00016158615,"about_ca_topic_score_gemma":0.0005005458,"teacher_disagreement_score":0.0018541206,"about_ca_system_score_codex":0.0002632323,"about_ca_system_score_gemma":0.00036241297,"threshold_uncertainty_score":0.006202638},"labels":[],"label_agreement":null},{"id":"W3015290071","doi":"10.1186/s12915-020-0762-1","title":"Insights into the origin of metazoan multicellularity from predatory unicellular relatives of animals","year":2020,"lang":"en","type":"article","venue":"BMC Biology","topic":"Protist diversity and phylogeny","field":"Biochemistry, Genetics and Molecular Biology","cited_by":87,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"Natural Sciences and Engineering Research Council of Canada; Russian Science Foundation","keywords":"Multicellular organism; Biology; Most recent common ancestor; Evolutionary biology; Predation; Phylogenetics; Ecology; Cell; Gene; Genetics","score_opus":0.03838057196292462,"score_gpt":0.25737604012123155,"score_spread":0.21899546815830695,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3015290071","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.95908606,0.020226108,0.013292758,0.0009712098,0.00004779338,0.000020898027,0.0003198621,0.00009145885,0.0059438907],"genre_scores_gemma":[0.98405737,0.00520493,0.009681912,0.0001537934,0.000034777913,0.00001073283,0.00024569928,0.000017309498,0.00059349975],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99990344,0.000010626545,0.0000072912485,0.000030302537,0.00002719433,0.000021181591],"domain_scores_gemma":[0.99966,0.00007334999,0.000102301085,0.000047187452,0.00005521067,0.000062065905],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00023169017,0.00031162373,0.00019196265,0.0007212888,0.00050215435,0.000682988,0.00036204397,0.0006026599,0.0010786385],"category_scores_gemma":[0.00037270767,0.00019727321,0.00023890087,0.00042709673,0.00075405167,0.001300382,0.0007041486,0.0008393487,0.00033170244],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00019592325,0.0000505783,0.06870995,0.0009763845,0.00007475837,0.0015198487,0.0014903642,0.00086117536,0.8784538,0.00947558,0.000399267,0.037792407],"study_design_scores_gemma":[0.000027154641,0.00046263382,0.74140424,0.0004076533,0.00022217052,0.00794977,0.0033393253,0.005961922,0.14977829,0.028564667,0.06181357,0.00006855664],"about_ca_topic_score_codex":0.0006640108,"about_ca_topic_score_gemma":0.0012810932,"teacher_disagreement_score":0.0010786385,"about_ca_system_score_codex":0.0005887033,"about_ca_system_score_gemma":0.00033634508,"threshold_uncertainty_score":0.0042713284},"labels":[],"label_agreement":null},{"id":"W3032063460","doi":"10.1186/s12915-020-00794-4","title":"Deficits in coordinated neuronal activity and network topology are striatal hallmarks in Huntington’s disease","year":2020,"lang":"en","type":"article","venue":"BMC Biology","topic":"Genetic Neurodegenerative Diseases","field":"Neuroscience","cited_by":18,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"Instituto de Salud Carlos III; Horizon 2020 Framework Programme; Generalitat de Catalunya; European Commission; Ministerio de Ciencia, Innovación y Universidades; Universitat de Barcelona; University of Calgary","keywords":"Huntington's disease; Neuroscience; Basal ganglia; Biology; Medium spiny neuron; Striatum; Excitatory postsynaptic potential; Premovement neuronal activity; Calcium imaging; Inhibitory postsynaptic potential; Disease; Central nervous system; Internal medicine; Dopamine; Medicine; Calcium","score_opus":0.043230673020661914,"score_gpt":0.27726874381284783,"score_spread":0.23403807079218591,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3032063460","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.96104485,0.0009327307,0.035848554,0.0000592105,0.000009616914,0.000018837087,0.0008930511,0.00023531489,0.000957796],"genre_scores_gemma":[0.9893227,0.00047032943,0.009012744,0.0000131542965,0.000004209758,0.000025331063,0.00069064397,0.00001982054,0.00044104972],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9999354,0.000008380286,0.000005297552,0.000026067708,0.000016042413,0.000008774646],"domain_scores_gemma":[0.9998771,0.00002843508,0.000040883777,0.000015090988,0.000018462484,0.000020015663],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012302086,0.00027513193,0.00023237578,0.00037914072,0.00015026206,0.00037720127,0.00019360136,0.00019307672,0.00062267156],"category_scores_gemma":[0.00021129103,0.00015839392,0.00016728786,0.0002626557,0.00019715514,0.00022980955,0.00024148477,0.00026162498,0.00008298279],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013462237,0.00004777475,0.012005974,0.00020077909,0.00010498048,0.00022330382,0.00011472967,0.0113044605,0.95354575,0.0007691549,0.00027266558,0.02127583],"study_design_scores_gemma":[0.000021796779,0.0003958067,0.34685153,0.00008391487,0.00028714677,0.0012595751,0.00032225935,0.17064713,0.47109306,0.005382758,0.0035953752,0.00005974605],"about_ca_topic_score_codex":0.0016079488,"about_ca_topic_score_gemma":0.0033702736,"teacher_disagreement_score":0.0016079488,"about_ca_system_score_codex":0.00026331263,"about_ca_system_score_gemma":0.000146437,"threshold_uncertainty_score":0.0031971931},"labels":[],"label_agreement":null},{"id":"W3038263275","doi":"10.1186/s12915-020-00808-1","title":"Genome assembly of the basket willow, Salix viminalis, reveals earliest stages of sex chromosome expansion","year":2020,"lang":"en","type":"article","venue":"BMC Biology","topic":"Genetic and Clinical Aspects of Sex Determination and Chromosomal Abnormalities","field":"Biochemistry, Genetics and Molecular Biology","cited_by":72,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"Uppsala Multidisciplinary Center for Advanced Computational Science; Natural Sciences and Engineering Research Council of Canada; Science for Life Laboratory; Energimyndigheten; European Research Council; Vetenskapsrådet; Svenska Forskningsrådet Formas; Knut och Alice Wallenbergs Stiftelse; Canada Research Chairs; University College London","keywords":"Biology; Willow; Salix viminalis; Genome; Genetics; Chromosome; Botany; Evolutionary biology; Gene","score_opus":0.022075662336786896,"score_gpt":0.26860575315408153,"score_spread":0.24653009081729463,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3038263275","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.94367313,0.00210803,0.022027418,0.00026643337,0.00006269596,0.000120500015,0.027630026,0.0015055472,0.0026062008],"genre_scores_gemma":[0.82781255,0.0015432033,0.0710928,0.00021378892,0.00004426593,0.00016135632,0.09500031,0.0008292469,0.0033023958],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999044,0.0000049991722,0.0000073853116,0.00004410987,0.000028704946,0.000010427819],"domain_scores_gemma":[0.99979895,0.000030814284,0.000082511055,0.000018655885,0.000034177854,0.000034860328],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00016200225,0.00043703627,0.00025029984,0.00076729385,0.0004053353,0.0003850699,0.0002454343,0.00031836602,0.0011083215],"category_scores_gemma":[0.00039534294,0.00021549404,0.00048597623,0.00049840356,0.00013647054,0.00030529973,0.00028494795,0.00039955156,0.0005906538],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000127612,0.000010623016,0.0057268064,0.00021758334,0.00002804871,0.0001286076,0.00015545754,0.00028798895,0.98688555,0.00009804322,0.00026499075,0.0060687345],"study_design_scores_gemma":[0.000048308997,0.00048453023,0.60353273,0.000118465185,0.0003703766,0.0013927316,0.000521166,0.008390684,0.3422311,0.0006646122,0.042182833,0.000062454754],"about_ca_topic_score_codex":0.0024631172,"about_ca_topic_score_gemma":0.0057946453,"teacher_disagreement_score":0.0024631172,"about_ca_system_score_codex":0.00034827078,"about_ca_system_score_gemma":0.00039018795,"threshold_uncertainty_score":0.004897535},"labels":[],"label_agreement":null},{"id":"W3044551817","doi":"10.1186/s12915-020-00819-y","title":"Defining rules governing recognition and Fc-mediated effector functions to the HIV-1 co-receptor binding site","year":2020,"lang":"en","type":"article","venue":"BMC Biology","topic":"HIV Research and Treatment","field":"Immunology and Microbiology","cited_by":28,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; McGill University; Centre Hospitalier de l’Université de Montréal","funders":"SLAC National Accelerator Laboratory; Basic Energy Sciences; Biological and Environmental Research; National Institute of Allergy and Infectious Diseases; National Institute of General Medical Sciences; Office of Science; National Institutes of Health; U.S. Department of Energy","keywords":"Biology; Antibody-dependent cell-mediated cytotoxicity; Epitope; Effector; Antibody; Co-receptor; Receptor; Cell biology; Binding site; Plasma protein binding; Fc receptor; Glycoprotein; Virology; Function (biology); Immunology; Molecular biology; Genetics; Monoclonal antibody","score_opus":0.03447766046606682,"score_gpt":0.2654001550895686,"score_spread":0.23092249462350178,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3044551817","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.89632076,0.002339121,0.08268031,0.00051109225,0.0001234171,0.00029360646,0.00015523614,0.00031012073,0.017266266],"genre_scores_gemma":[0.980757,0.00091040955,0.016318403,0.00016766766,0.000037527312,0.0001796814,0.00019857797,0.000041461688,0.0013893351],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9993618,0.00010290424,0.000057391026,0.00016296038,0.00017779802,0.00013712802],"domain_scores_gemma":[0.998865,0.00048664026,0.00022062664,0.00019100802,0.00013544832,0.00010125473],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010993272,0.00039280416,0.00047621527,0.00029035955,0.00059266,0.0019168431,0.001192397,0.0009456015,0.0014707113],"category_scores_gemma":[0.00294055,0.0002842807,0.0003010018,0.00017519812,0.0017635629,0.0014439278,0.000521144,0.000995607,0.00067339296],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005243551,0.00020030595,0.0060465215,0.0004293741,0.000041761657,0.0011901312,0.00047048857,0.009204641,0.7976578,0.16191006,0.00090194907,0.021422705],"study_design_scores_gemma":[0.00018137768,0.00074125093,0.008009634,0.00015216554,0.000081410915,0.002626671,0.0005219402,0.06334457,0.8149451,0.08865975,0.020625345,0.00011079308],"about_ca_topic_score_codex":0.00062610285,"about_ca_topic_score_gemma":0.000558183,"teacher_disagreement_score":0.0019168431,"about_ca_system_score_codex":0.00088109175,"about_ca_system_score_gemma":0.0006649386,"threshold_uncertainty_score":0.006392777},"labels":[],"label_agreement":null},{"id":"W3069889787","doi":"10.1186/s12915-020-00826-z","title":"Large-scale discovery of male reproductive tract-specific genes through analysis of RNA-seq datasets","year":2020,"lang":"en","type":"article","venue":"BMC Biology","topic":"Sperm and Testicular Function","field":"Medicine","cited_by":110,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"Eunice Kennedy Shriver National Institute of Child Health and Human Development; National Institute of Child Health and Human Development; Cancer Prevention and Research Institute of Texas; University of Texas MD Anderson Cancer Center; National Institutes of Health; Bill and Melinda Gates Foundation","keywords":"Biology; Gene; Epididymis; Computational biology; Druggability; Genetics; Phenotype; CRISPR; Bioinformatics; Sperm","score_opus":0.05208733371810797,"score_gpt":0.29982187391333,"score_spread":0.247734540195222,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3069889787","genre_codex":"dataset","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.3159455,0.013953507,0.10355698,0.0012536546,0.00068694603,0.0005721748,0.5507558,0.0057039186,0.007571635],"genre_scores_gemma":[0.25864393,0.003746458,0.15357393,0.0024897694,0.00024329787,0.0016725445,0.5748211,0.0017650191,0.0030438292],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9983664,0.0002385653,0.000111660396,0.0007659435,0.0003801317,0.0001372582],"domain_scores_gemma":[0.9980956,0.0010751224,0.00020963028,0.00015424904,0.00035148673,0.00011398433],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0017596312,0.0011749566,0.0014688302,0.0024084637,0.0009559723,0.0014309877,0.0009573026,0.00094978884,0.0019027321],"category_scores_gemma":[0.0031032693,0.00040343078,0.0016829834,0.0019581777,0.00046175462,0.00045386294,0.0011763945,0.0013728843,0.0015766699],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0017191852,0.00039236443,0.15087576,0.010313719,0.0042440393,0.0023198833,0.0009935615,0.0208158,0.6440622,0.0046038567,0.050927043,0.10873262],"study_design_scores_gemma":[0.00053730846,0.0007896762,0.45943773,0.001589192,0.003289287,0.0025373623,0.0020132463,0.123427235,0.14193109,0.018528322,0.24533984,0.0005797468],"about_ca_topic_score_codex":0.0032509044,"about_ca_topic_score_gemma":0.010682287,"teacher_disagreement_score":0.0032509044,"about_ca_system_score_codex":0.00057269394,"about_ca_system_score_gemma":0.0016504461,"threshold_uncertainty_score":0.009305954},"labels":[],"label_agreement":null},{"id":"W3082631287","doi":"10.1186/s12915-020-00837-w","title":"Excess diacylglycerol at the endoplasmic reticulum disrupts endomembrane homeostasis and autophagy","year":2020,"lang":"en","type":"article","venue":"BMC Biology","topic":"Endoplasmic Reticulum Stress and Disease","field":"Biochemistry, Genetics and Molecular Biology","cited_by":33,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"School of Life Sciences and Biotechnology Division of Life Sciences, Korea University; Institute of Genetics and Developmental Biology, Chinese Academy of Sciences; Medizinische Universität Wien; Shanghai Jiao Tong University; Science and Technology Commission of Shanghai Municipality; Chinese Academy of Sciences; Institute of Genetics; National Natural Science Foundation of China; Shanghai Municipal Education Commission; Universität Wien; University of New South Wales","keywords":"Endoplasmic reticulum; Endomembrane system; Biology; Diacylglycerol kinase; Cell biology; Autophagy; Homeostasis; Golgi apparatus; Signal transduction; Biochemistry; Apoptosis; Protein kinase C","score_opus":0.014753372557170448,"score_gpt":0.24974066175926307,"score_spread":0.23498728920209264,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3082631287","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9867203,0.0036952442,0.005830261,0.0003357183,0.00013318632,0.00004880172,0.0009872651,0.00021716302,0.0020320714],"genre_scores_gemma":[0.9920759,0.0015699838,0.0025793049,0.00012387731,0.000013652006,0.000031444517,0.0004992056,0.000036738955,0.0030699212],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99985707,0.000021251344,0.00002213515,0.00002947965,0.00003763618,0.000032355947],"domain_scores_gemma":[0.99987423,0.000018484612,0.00004409277,0.000021172591,0.000012012954,0.000029935321],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015418787,0.0005118316,0.00026337465,0.00026649135,0.0001611684,0.0003935968,0.0003228213,0.0004400197,0.0013309815],"category_scores_gemma":[0.00010696689,0.00015104712,0.00023403896,0.00028003124,0.00032274064,0.0003031268,0.00042400116,0.0004920536,0.00052069814],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00019745048,0.00001632011,0.0001988993,0.00005000736,0.000005572707,0.00009679389,0.0000063865136,0.00006292183,0.99848574,0.00020041494,0.000025052621,0.0006545004],"study_design_scores_gemma":[0.000010517496,0.000078422774,0.0015947238,0.0000064556475,0.000011742137,0.0002377928,0.000015326674,0.00034666486,0.9960204,0.00012063907,0.0015538442,0.0000034538218],"about_ca_topic_score_codex":0.00044883194,"about_ca_topic_score_gemma":0.00065247406,"teacher_disagreement_score":0.0013309815,"about_ca_system_score_codex":0.000714386,"about_ca_system_score_gemma":0.0002956238,"threshold_uncertainty_score":0.0051832795},"labels":[],"label_agreement":null},{"id":"W3086198605","doi":"10.1186/s12915-020-00853-w","title":"A non-photosynthetic green alga illuminates the reductive evolution of plastid electron transport systems","year":2020,"lang":"en","type":"article","venue":"BMC Biology","topic":"Protist diversity and phylogeny","field":"Biochemistry, Genetics and Molecular Biology","cited_by":16,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Institute of Genetics; Japan Society for the Promotion of Science","keywords":"Biology; Plastid; Electron transport chain; Photosynthesis; Chloroplast; Botany; Evolutionary biology; Genetics; Gene","score_opus":0.010539110657028249,"score_gpt":0.21115416448469693,"score_spread":0.20061505382766867,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3086198605","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.982803,0.002518371,0.011469618,0.00027370334,0.000048793245,0.000014503228,0.00050236,0.00027243717,0.0020971398],"genre_scores_gemma":[0.9929577,0.00093206856,0.0036040994,0.000089909394,0.000007691638,0.000010128464,0.0006959131,0.000033768345,0.0016686019],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99988866,0.000010842527,0.0000089004325,0.000037890077,0.000037661244,0.000015967835],"domain_scores_gemma":[0.999864,0.00002133788,0.000033075874,0.000031787953,0.000025429417,0.000024485476],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013649762,0.00043427825,0.00019895326,0.0001380595,0.0002711629,0.0004177996,0.00029585836,0.0003372491,0.0006329975],"category_scores_gemma":[0.000111560075,0.00011523461,0.0002539672,0.00016053265,0.00031490056,0.00033457603,0.00053124427,0.0005391601,0.000309874],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000020079535,0.000005236266,0.00039713088,0.00005506666,0.0000039021434,0.0000337343,0.000018653122,0.00003969489,0.9980762,0.00019479512,0.000023178214,0.001132259],"study_design_scores_gemma":[0.0000151167515,0.00023182358,0.030640408,0.000023756897,0.00009193286,0.0012432277,0.00015766521,0.0024570783,0.94954497,0.0010520677,0.014523872,0.000017993803],"about_ca_topic_score_codex":0.00050967827,"about_ca_topic_score_gemma":0.00072089024,"teacher_disagreement_score":0.0006329975,"about_ca_system_score_codex":0.00030647122,"about_ca_system_score_gemma":0.00029762514,"threshold_uncertainty_score":0.0022236109},"labels":[],"label_agreement":null},{"id":"W3093489493","doi":"10.1186/s12915-020-00880-7","title":"PHOSPHO1 is a skeletal regulator of insulin resistance and obesity","year":2020,"lang":"en","type":"article","venue":"BMC Biology","topic":"Alkaline Phosphatase Research Studies","field":"Medicine","cited_by":27,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Montreal Clinical Research Institute; McGill University","funders":"National Institute of Arthritis and Musculoskeletal and Skin Diseases; Biotechnology and Biological Sciences Research Council; National Institutes of Health; University of Aberdeen; Society for Endocrinology; Medical Research Council; Directorate for Biological Sciences; Maine Medical Center Research Institute; Faculty of Dentistry, McGill University; McGill University","keywords":"Biology; Endocrinology; Internal medicine; Glucose homeostasis; Energy homeostasis; Homeostasis; Insulin resistance; Adipose tissue; Insulin; Bone remodeling; Carbohydrate metabolism; Obesity","score_opus":0.03894604900222102,"score_gpt":0.31887065045358975,"score_spread":0.2799246014513687,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3093489493","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.93353474,0.041670784,0.008869834,0.0017663438,0.0005773093,0.0000652929,0.004599742,0.00061795354,0.0082978755],"genre_scores_gemma":[0.96993905,0.012575168,0.002714821,0.00030692504,0.00017074042,0.00006398158,0.002648538,0.000080198464,0.011500627],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999231,0.000009180916,0.0000047381604,0.000025148358,0.00002398863,0.000013839137],"domain_scores_gemma":[0.9999093,0.000009585958,0.000045393946,0.0000050147833,0.0000091296415,0.000021553147],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00011622715,0.00058204035,0.0002756736,0.00027952282,0.000145964,0.0004075265,0.00029366752,0.0003738359,0.0029271438],"category_scores_gemma":[0.00009819365,0.00017766363,0.00021648874,0.00018418682,0.00018614535,0.000108632856,0.00022848228,0.00046572223,0.0007253043],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.001282577,0.000048297643,0.0024911554,0.00035625277,0.00005112206,0.00032192518,0.000022065886,0.00022047154,0.98113143,0.00045758765,0.0010587662,0.012558438],"study_design_scores_gemma":[0.00038821268,0.0016119186,0.16526514,0.000224437,0.00043112965,0.0044701486,0.00019098762,0.003646749,0.763388,0.001497245,0.05883847,0.000047523663],"about_ca_topic_score_codex":0.0003134377,"about_ca_topic_score_gemma":0.0004208702,"teacher_disagreement_score":0.0029271438,"about_ca_system_score_codex":0.00020726876,"about_ca_system_score_gemma":0.00016884632,"threshold_uncertainty_score":0.009792328},"labels":[],"label_agreement":null},{"id":"W3097226470","doi":"10.1186/s12915-020-00895-0","title":"TRIM25 promotes Capicua degradation independently of ERK in the absence of ATXN1L","year":2020,"lang":"en","type":"article","venue":"BMC Biology","topic":"Melanoma and MAPK Pathways","field":"Biochemistry, Genetics and Molecular Biology","cited_by":11,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Vancouver General Hospital; Canada's Michael Smith Genome Sciences Centre; Simon Fraser University; University of British Columbia; BC Cancer Agency","funders":"Canadian Institutes of Health Research; BC Cancer Foundation","keywords":"Biology; MAPK/ERK pathway; Ubiquitin ligase; Transcription factor; Cell biology; Ubiquitin; Protein kinase A; Protein degradation; Proteasome; Cancer research; Downregulation and upregulation; Signal transduction; Kinase; Genetics; Gene","score_opus":0.03512778592242114,"score_gpt":0.26047648144950186,"score_spread":0.22534869552708073,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3097226470","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9947615,0.001633018,0.0010101452,0.00012009071,0.000046292913,0.000017447826,0.0003761465,0.000085895794,0.0019495473],"genre_scores_gemma":[0.99612147,0.00029509538,0.00054310163,0.00004962175,0.0000063352377,0.000020240403,0.00047136596,0.000012809217,0.002480066],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998877,0.00002062979,0.000010895445,0.000022841436,0.000025963776,0.000032017353],"domain_scores_gemma":[0.9998591,0.000017965023,0.00004080124,0.000020012172,0.000012942116,0.00004917469],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00018266142,0.00018926877,0.00016043932,0.00017011311,0.00015233268,0.00024684094,0.00025676936,0.00023386118,0.002574676],"category_scores_gemma":[0.00013635244,0.000092400776,0.00021532377,0.00008786111,0.00020716562,0.00013343757,0.00022531577,0.00037926034,0.00077623787],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003665519,0.00004628096,0.0002818726,0.000074778036,0.000008379357,0.00012997059,0.00001346149,0.00007098983,0.99777263,0.00009149606,0.00019290944,0.0009506743],"study_design_scores_gemma":[0.000027409558,0.00031396115,0.010852618,0.000011697667,0.000014419339,0.0004536805,0.000051943865,0.0013222765,0.98398584,0.000052914744,0.0029077963,0.0000054451625],"about_ca_topic_score_codex":0.00080222887,"about_ca_topic_score_gemma":0.0014782703,"teacher_disagreement_score":0.002574676,"about_ca_system_score_codex":0.00034827838,"about_ca_system_score_gemma":0.0002102739,"threshold_uncertainty_score":0.008613169},"labels":[],"label_agreement":null},{"id":"W3097720481","doi":"10.1186/s12915-020-00891-4","title":"Adaptive, diverse and de-centralized diagnostics are key to the future of outbreak response","year":2020,"lang":"en","type":"article","venue":"BMC Biology","topic":"SARS-CoV-2 detection and testing","field":"Medicine","cited_by":26,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hydro One (Canada); Canadian Association for Co-operative Education; University of Toronto","funders":"Canadian Institutes of Health Research; University of Toronto; International Development Research Centre","keywords":"Biology; Outbreak; Key (lock); Computational biology; Virology; Ecology","score_opus":0.06068446693132233,"score_gpt":0.3028779921565615,"score_spread":0.24219352522523918,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3097720481","genre_codex":"commentary","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.011414671,0.07792928,0.14266182,0.7307944,0.011091406,0.00022661989,0.0007220364,0.0028195356,0.022340221],"genre_scores_gemma":[0.3001892,0.08999142,0.31973583,0.25425336,0.014851041,0.000664485,0.0016475123,0.0011741486,0.017493058],"study_design_codex":"design_other","study_design_gemma":"theoretical_or_conceptual","domain_scores_codex":[0.99074066,0.0039947657,0.00040167317,0.0014438917,0.0021308402,0.0012881524],"domain_scores_gemma":[0.9717249,0.011452244,0.002194464,0.0036310616,0.0060773618,0.004919971],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.023866668,0.0014097724,0.0015607822,0.0010645448,0.002128339,0.00858415,0.0032652463,0.008081206,0.009952343],"category_scores_gemma":[0.024297543,0.00072617986,0.0012505947,0.000662758,0.008980194,0.015851296,0.006224173,0.0154166045,0.0060664685],"study_design_candidate":"theoretical_or_conceptual","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00047518642,0.0006028802,0.009605142,0.003045962,0.00032999687,0.000571356,0.0033816374,0.00796834,0.03461937,0.16369067,0.23645249,0.539257],"study_design_scores_gemma":[0.00008436094,0.0005612621,0.0050489986,0.0020853276,0.0001515414,0.00061199977,0.0051915958,0.004626894,0.007663496,0.3164083,0.6572883,0.00027789295],"about_ca_topic_score_codex":0.00225171,"about_ca_topic_score_gemma":0.002445283,"teacher_disagreement_score":0.023866668,"about_ca_system_score_codex":0.003530368,"about_ca_system_score_gemma":0.010464024,"threshold_uncertainty_score":0.12622052},"labels":[],"label_agreement":null},{"id":"W3112440426","doi":"10.1186/s12915-020-00901-5","title":"Sphenodontian phylogeny and the impact of model choice in Bayesian morphological clock estimates of divergence times and evolutionary rates","year":2020,"lang":"en","type":"article","venue":"BMC Biology","topic":"Paleontology and Evolutionary Biology","field":"Earth and Planetary Sciences","cited_by":88,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"Natural Sciences and Engineering Research Council of Canada; Museum of Comparative Zoology, Harvard University; Canadian Network for Research and Innovation in Machining Technology, Natural Sciences and Engineering Research Council of Canada; Harvard University","keywords":"Biology; Molecular clock; Evolutionary biology; Divergence (linguistics); Phylogenetics; Taxon; Taxonomic rank; Inference; Tree of life (biology); Ecology; Artificial intelligence; Computer science; Genetics","score_opus":0.029958608450314395,"score_gpt":0.26585544996956767,"score_spread":0.23589684151925328,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3112440426","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.86972284,0.0024102938,0.12296359,0.001833174,0.00009566648,0.00013531662,0.0009311707,0.00037145114,0.0015364626],"genre_scores_gemma":[0.96343595,0.00044093153,0.034186486,0.000351429,0.000034204237,0.00012574514,0.0010717574,0.00018100048,0.00017242995],"study_design_codex":"simulation_or_modeling","study_design_gemma":"simulation_or_modeling","domain_scores_codex":[0.9830971,0.012737875,0.000880046,0.0022487105,0.0006480444,0.00038820802],"domain_scores_gemma":[0.8645349,0.124678336,0.0042930283,0.003287788,0.0019034165,0.0013025788],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.03665414,0.0014465064,0.0014974709,0.0014283342,0.0016914521,0.0033684594,0.0026809066,0.002395013,0.0023599705],"category_scores_gemma":[0.130889,0.00088248274,0.0027331521,0.0012214099,0.002225994,0.003933279,0.001926488,0.0032471162,0.00028087563],"study_design_candidate":"simulation_or_modeling","study_design_consensus":"simulation_or_modeling","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0018066963,0.00022066792,0.14985222,0.0008528729,0.0026769955,0.00051803014,0.0010633065,0.7859849,0.0058593205,0.016247865,0.0013588158,0.03355832],"study_design_scores_gemma":[0.000413724,0.0004692081,0.027232202,0.0003982442,0.001184221,0.0003923221,0.0005814078,0.92423284,0.0028032076,0.040462717,0.0016329631,0.00019697622],"about_ca_topic_score_codex":0.010294226,"about_ca_topic_score_gemma":0.010262047,"teacher_disagreement_score":0.03665414,"about_ca_system_score_codex":0.0023034108,"about_ca_system_score_gemma":0.0025084515,"threshold_uncertainty_score":0.19384795},"labels":[],"label_agreement":null},{"id":"W3122154372","doi":"10.1186/s12915-020-00942-w","title":"DNA methyltransferase 3a mediates developmental thermal plasticity","year":2021,"lang":"en","type":"article","venue":"BMC Biology","topic":"Physiological and biochemical adaptations","field":"Environmental Science","cited_by":55,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Queen's University","funders":"Australian Research Council","keywords":"Biology; Zebrafish; Danio; Offspring; Epigenetics; Acclimatization; DNA methylation; Phenotypic plasticity; Cell biology; Methyltransferase; Genetics; Maternal effect; Developmental plasticity; Plasticity; DNA; Methylation; Gene; Gene expression; Pregnancy","score_opus":0.027166968899831893,"score_gpt":0.23436663716507666,"score_spread":0.20719966826524477,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3122154372","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97886205,0.0047276947,0.010776465,0.00031702002,0.00009563434,0.000044220593,0.0013658227,0.0005157659,0.0032952907],"genre_scores_gemma":[0.994886,0.00068384927,0.0018165701,0.00007222867,0.000009121817,0.00003795563,0.00042126578,0.000041037787,0.002031949],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998698,0.000012848863,0.000011669472,0.00005349967,0.000027612934,0.000024445535],"domain_scores_gemma":[0.9997818,0.000027310985,0.00008534915,0.00002885055,0.000026931759,0.000049793787],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013373373,0.0004383357,0.00028636714,0.00015871474,0.00025222375,0.0002886389,0.00036783828,0.00045329932,0.002782917],"category_scores_gemma":[0.0002868177,0.0002123234,0.00043352527,0.00009777189,0.000339713,0.00025398802,0.0006083779,0.0005746996,0.00057533593],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006599552,0.0000053004696,0.0005928458,0.000046281213,0.000010879032,0.000028119792,0.000009744111,0.000054182008,0.9980369,0.00008284595,0.00004690028,0.0010200031],"study_design_scores_gemma":[0.000028362609,0.00021616732,0.074085124,0.000035119872,0.00011266711,0.00036305143,0.00004312944,0.002481515,0.91730785,0.00036019727,0.004944124,0.000022715201],"about_ca_topic_score_codex":0.0018936401,"about_ca_topic_score_gemma":0.0035440507,"teacher_disagreement_score":0.002782917,"about_ca_system_score_codex":0.0005957996,"about_ca_system_score_gemma":0.00031899064,"threshold_uncertainty_score":0.009309769},"labels":[],"label_agreement":null},{"id":"W3126812715","doi":"10.1186/s12915-021-00955-z","title":"Single-cell RNA-seq reveals a concomitant delay in differentiation and cell cycle of aged hematopoietic stem cells","year":2021,"lang":"en","type":"article","venue":"BMC Biology","topic":"Single-cell and spatial transcriptomics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":53,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Institut National Du Cancer; Aix-Marseille Université; Centre de Recherche en Cancérologie de Marseille; Fondation de France; Fondation ARC pour la Recherche sur le Cancer; CNIB","keywords":"Biology; Haematopoiesis; Stem cell; Transcriptome; Transcription factor; Cell biology; Cell cycle; Cellular differentiation; Hematopoietic stem cell; Immunology; Cell; Genetics; Gene expression; Gene","score_opus":0.018009862991645437,"score_gpt":0.22159295216070204,"score_spread":0.2035830891690566,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3126812715","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.970668,0.002316978,0.01786059,0.00007254792,0.000047766713,0.000015661019,0.0072375326,0.00026466988,0.0015162593],"genre_scores_gemma":[0.97902346,0.001111049,0.010241678,0.00016327195,0.000020415135,0.00005148022,0.006815642,0.00012173316,0.0024512443],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.999889,0.000005447674,0.000005814603,0.000055989705,0.000026377358,0.000017401031],"domain_scores_gemma":[0.9999018,0.000020052574,0.000023885803,0.000012409223,0.000025107705,0.00001672671],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00016574346,0.00016143246,0.00024938514,0.00031625567,0.00015256919,0.00031616006,0.00014606104,0.00018682476,0.0007893363],"category_scores_gemma":[0.00016317365,0.00010302665,0.00022243353,0.00027534028,0.00018240017,0.00017371301,0.00018895684,0.00028166646,0.0002656504],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007377014,0.0000054430366,0.005051942,0.00006069011,0.000014364746,0.000030927848,0.000051540148,0.00022328191,0.989714,0.00012421349,0.00015183378,0.004498013],"study_design_scores_gemma":[0.000009668026,0.00016708953,0.3594055,0.00003756459,0.00014348628,0.00041822987,0.00025154953,0.0093944855,0.6157948,0.000965952,0.013377391,0.00003435326],"about_ca_topic_score_codex":0.0007495254,"about_ca_topic_score_gemma":0.001683736,"teacher_disagreement_score":0.0007893363,"about_ca_system_score_codex":0.00015934161,"about_ca_system_score_gemma":0.00016005852,"threshold_uncertainty_score":0.002640605},"labels":[],"label_agreement":null},{"id":"W3136845941","doi":"10.1186/s12915-021-00996-4","title":"Reorganization of the 3D chromatin architecture of rice genomes during heat stress","year":2021,"lang":"en","type":"article","venue":"BMC Biology","topic":"Genomics and Chromatin Dynamics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":98,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Biotechnology Research Institute","funders":"Chinese Academy of Agricultural Sciences","keywords":"Chromatin; Biology; Genome; Gene; Genetics; Gene expression; Genomic organization; Regulation of gene expression; Cell biology; Computational biology","score_opus":0.003933790279315463,"score_gpt":0.200189804236711,"score_spread":0.19625601395739556,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3136845941","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99468476,0.00036510467,0.003541707,0.00003417611,0.000007319855,0.000007297147,0.00069000135,0.00007358079,0.00059613667],"genre_scores_gemma":[0.996967,0.00013054388,0.0015310737,0.00003321741,0.000002974211,0.000010748097,0.00068208034,0.000016457117,0.00062579603],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99996054,0.0000026608245,0.0000016003797,0.000016802423,0.000008232272,0.000010222021],"domain_scores_gemma":[0.99993896,0.000007905162,0.00001932423,0.000008099731,0.000010946464,0.000014782752],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00006898928,0.000115398885,0.000084396845,0.00019256432,0.00014952997,0.00022001001,0.00010147741,0.00012876549,0.0008139718],"category_scores_gemma":[0.00008560007,0.000121391895,0.00019411244,0.0001441232,0.00020624403,0.00014671416,0.0001631584,0.00019001195,0.00012827113],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007144739,0.0000039468155,0.003406353,0.00003459316,0.000008526356,0.000028247523,0.00006583298,0.00020377201,0.9944695,0.00007674725,0.00004771716,0.0015832768],"study_design_scores_gemma":[0.000009191576,0.00010328865,0.6095188,0.000013335342,0.000042450665,0.0004140987,0.0002370047,0.0047677746,0.381848,0.00032621468,0.0026987018,0.000021099628],"about_ca_topic_score_codex":0.0014056427,"about_ca_topic_score_gemma":0.0027120742,"teacher_disagreement_score":0.0014056427,"about_ca_system_score_codex":0.0002389904,"about_ca_system_score_gemma":0.00014704274,"threshold_uncertainty_score":0.0027949214},"labels":[],"label_agreement":null},{"id":"W3137453670","doi":"10.1186/s12915-021-00979-5","title":"Neuronal cell-based high-throughput screen for enhancers of mitochondrial function reveals luteolin as a modulator of mitochondria-endoplasmic reticulum coupling","year":2021,"lang":"en","type":"article","venue":"BMC Biology","topic":"Mitochondrial Function and Pathology","field":"Biochemistry, Genetics and Molecular Biology","cited_by":36,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"Karolinska Institutet; Università degli Studi di Padova; Stockholms Universitet; Deutsches Zentrum für Neurodegenerative Erkrankungen; King's College London","keywords":"Endoplasmic reticulum; Biology; Mitochondrion; Cell biology; Coupling (piping); Function (biology); Cell; Enhancer; Luteolin; Biochemistry; Quercetin; Transcription factor; Gene; Antioxidant","score_opus":0.013511759507510908,"score_gpt":0.25595986258923575,"score_spread":0.24244810308172485,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3137453670","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9865442,0.002082554,0.0077002384,0.00014505726,0.000017890965,0.0002085918,0.0015217062,0.00024788233,0.0015319309],"genre_scores_gemma":[0.9841813,0.00150862,0.008573451,0.000097779695,0.000007653484,0.0001573068,0.0025010423,0.00003134366,0.0029415486],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999021,0.000014346194,0.000010532197,0.00002230066,0.00003583261,0.0000148826675],"domain_scores_gemma":[0.9999062,0.00002905145,0.000017059878,0.000013610649,0.000016074671,0.000017990886],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001883115,0.0003338426,0.0004128412,0.00031752966,0.00017245066,0.00028130872,0.00026605747,0.00027727574,0.0012797439],"category_scores_gemma":[0.0001265402,0.00010499255,0.0002952041,0.00024523103,0.00013619533,0.000115435534,0.00020635204,0.00031911596,0.00040165408],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000046669455,0.00005028972,0.00020585363,0.000025290154,0.0000068624945,0.000041432697,0.000004247979,0.00011082986,0.9984078,0.000018483572,0.000043414428,0.0010388576],"study_design_scores_gemma":[0.000035823956,0.0008201319,0.0027741096,0.000005026418,0.00006032228,0.0001521655,0.000014393536,0.0012044408,0.9930803,0.00002711517,0.001819904,0.0000062017098],"about_ca_topic_score_codex":0.00062285265,"about_ca_topic_score_gemma":0.0018141305,"teacher_disagreement_score":0.0012797439,"about_ca_system_score_codex":0.00027733203,"about_ca_system_score_gemma":0.0002353745,"threshold_uncertainty_score":0.004281163},"labels":[],"label_agreement":null},{"id":"W3152194451","doi":"10.1186/s12915-021-01006-3","title":"Towards open, reliable, and transparent ecology and evolutionary biology","year":2021,"lang":"en","type":"letter","venue":"BMC Biology","topic":"Scientific Computing and Data Management","field":"Decision Sciences","cited_by":82,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Carleton University; Université du Québec à Montréal","funders":"Nederlandse Organisatie voor Wetenschappelijk Onderzoek","keywords":"Biology; Transparency (behavior); Value (mathematics); Ecology; Citizen science; Computer science","score_opus":0.25682798929761086,"score_gpt":0.40709880377374597,"score_spread":0.1502708144761351,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3152194451","genre_codex":"commentary","genre_gemma":"commentary","domain_codex":null,"domain_gemma":"reproducibility","model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"commentary","genre_consensus":"commentary","domain_candidate":"reproducibility","domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00004983593,0.0007357257,0.00027998394,0.9925107,0.0060293893,0.0000032768671,0.000012970894,0.000013320141,0.00036470572],"genre_scores_gemma":[0.0012499997,0.000653595,0.00089570443,0.9776244,0.018362407,0.000022805474,0.00001520417,0.000022928512,0.0011528966],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.94949126,0.021788817,0.004216549,0.0051541375,0.016674249,0.0026749643],"domain_scores_gemma":[0.7601477,0.19167589,0.005418203,0.008061559,0.023546074,0.011150538],"candidate_categories":["metaresearch","open_science"],"consensus_categories":[],"category_scores_codex":[0.06107808,0.00087155786,0.0016207874,0.0013294353,0.006816749,0.012161156,0.004542117,0.098576725,0.006035584],"category_scores_gemma":[0.1709572,0.0012165878,0.0021338826,0.0015624899,0.021126514,0.027763594,0.008135625,0.10443238,0.0075593293],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000031330826,0.000026510113,0.00023831702,0.00011180969,0.000011784227,0.00035015904,0.0004873941,0.00008780748,0.00018644983,0.023985438,0.96242344,0.01205956],"study_design_scores_gemma":[0.000074127696,0.000034526238,0.0005292414,0.0004892942,0.000016075697,0.00065806287,0.00068694644,0.00079350173,0.0002700243,0.1328016,0.86354446,0.00010221235],"about_ca_topic_score_codex":0.007179733,"about_ca_topic_score_gemma":0.00956832,"teacher_disagreement_score":0.9954579,"about_ca_system_score_codex":0.009589727,"about_ca_system_score_gemma":0.01634354,"threshold_uncertainty_score":0.32301563},"labels":[],"label_agreement":null},{"id":"W3155361251","doi":"10.1186/s12915-021-00972-y","title":"Plasma membrane integrity: implications for health and disease","year":2021,"lang":"en","type":"review","venue":"BMC Biology","topic":"Endoplasmic Reticulum Stress and Disease","field":"Biochemistry, Genetics and Molecular Biology","cited_by":255,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"SickKids Foundation; Hospital for Sick Children; University of Toronto","funders":"National Institute of General Medical Sciences; Natural Sciences and Engineering Research Council of Canada; National Institutes of Health; Canadian Institutes of Health Research; Hospital for Sick Children; Foundation for the National Institutes of Health","keywords":"Biology; Cell biology; Membrane; Stressor; Homeostasis; Disease; Cell membrane; Cell; Neuroscience; Genetics; Pathology; Medicine","score_opus":0.06685320443570114,"score_gpt":0.39658039665622047,"score_spread":0.3297271922205193,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3155361251","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000033823868,0.9975199,0.00010768143,0.0010233327,0.0005821201,0.0000012974016,0.00001321463,0.000008041814,0.00071061414],"genre_scores_gemma":[0.0004027108,0.9977875,0.00011477913,0.0005254586,0.0004264074,0.000003373768,0.000023326267,0.000002350961,0.00071419234],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9996871,0.000057997426,0.0000418254,0.000057968173,0.00011686476,0.000038250477],"domain_scores_gemma":[0.9992118,0.00031424215,0.000076381824,0.00003494978,0.00025954403,0.00010305977],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010293542,0.0011716065,0.0016227815,0.0022351055,0.00048564255,0.001818298,0.0016761713,0.0030317658,0.004843837],"category_scores_gemma":[0.0015227455,0.00031939082,0.0005431186,0.002177936,0.0014860244,0.0030534866,0.0016103135,0.0033640745,0.0042159143],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000970732,0.000038447623,0.00016058712,0.013923745,0.00008929882,0.00029083007,0.00009089263,0.0005267435,0.0018614784,0.019714937,0.12404567,0.8391602],"study_design_scores_gemma":[0.0000061615933,0.000033877906,0.0003435976,0.0025158848,0.00003165019,0.0009032261,0.00004866402,0.000054973436,0.00018870835,0.006225666,0.9896325,0.000015035739],"about_ca_topic_score_codex":0.0011985587,"about_ca_topic_score_gemma":0.0014414967,"teacher_disagreement_score":0.004843837,"about_ca_system_score_codex":0.0017304231,"about_ca_system_score_gemma":0.0016871241,"threshold_uncertainty_score":0.016204238},"labels":[],"label_agreement":null},{"id":"W3157995364","doi":"10.1186/s12915-021-01029-w","title":"Global population genetic structure and demographic trajectories of the black soldier fly, Hermetia illucens","year":2021,"lang":"en","type":"article","venue":"BMC Biology","topic":"Insect Utilization and Effects","field":"Agricultural and Biological Sciences","cited_by":143,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Australian Centre for International Agricultural Research; Bundesamt für Landwirtschaft; Austrian Science Fund; Direktion für Entwicklung und Zusammenarbeit; National Research Foundation; International Development Research Centre; Schweizerischer Nationalfonds zur Förderung der Wissenschaftlichen Forschung; National Science Foundation","keywords":"Hermetia illucens; Biology; Population; Evolutionary biology; Zoology; Genetics; Ecology; Demography; Larva","score_opus":0.011548705039266617,"score_gpt":0.21698383250823958,"score_spread":0.20543512746897297,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3157995364","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9997453,0.000038159647,0.000041165848,0.0000062014724,3.2539253e-7,0.0000011509486,0.00008869795,9.730774e-7,0.00007796998],"genre_scores_gemma":[0.9994947,0.000044999044,0.000104867555,0.000004627199,0.000001103427,0.000002501131,0.00027994142,7.0798296e-7,0.00006664561],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9999237,0.000012797714,0.0000033205588,0.00004094331,0.0000067984024,0.000012425103],"domain_scores_gemma":[0.9997725,0.0000365366,0.00010182638,0.000022944707,0.000030850813,0.000035424204],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00026299848,0.0001259442,0.00010327245,0.0005518587,0.00017796799,0.00028187814,0.0001501137,0.0001605247,0.0006248168],"category_scores_gemma":[0.0003784672,0.000069854446,0.00013804121,0.00040362467,0.00030724704,0.000158062,0.00021650668,0.00017883125,0.00006237835],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010905393,0.000016023281,0.98779917,0.000013324201,0.0000749043,0.00008894478,0.000770971,0.00043353348,0.0061720926,0.000101598365,0.00008958546,0.0043307976],"study_design_scores_gemma":[0.0000016016329,0.000023641667,0.99935406,0.0000026096754,0.000009154424,0.00005406437,0.00019865845,0.00020041695,0.000044434702,0.000023622399,0.00008617689,0.0000015673701],"about_ca_topic_score_codex":0.008703412,"about_ca_topic_score_gemma":0.014780303,"teacher_disagreement_score":0.008703412,"about_ca_system_score_codex":0.0002444574,"about_ca_system_score_gemma":0.00009405742,"threshold_uncertainty_score":0.017305493},"labels":[],"label_agreement":null},{"id":"W3159371568","doi":"10.1186/s12915-021-01022-3","title":"Sensory adaptations reshaped intrinsic factors underlying morphological diversification in bats","year":2021,"lang":"en","type":"article","venue":"BMC Biology","topic":"Morphological variations and asymmetry","field":"Mathematics","cited_by":46,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Division of Integrative Organismal Systems; Natural Sciences and Engineering Research Council of Canada; American Museum of Natural History; National Science Foundation","keywords":"Biology; Allometry; Modularity (biology); Human echolocation; Evolutionary biology; Clade; Skull; Phylogenetic tree; Phylogenetics; Zoology; Ecology; Anatomy; Neuroscience","score_opus":0.2986440391448876,"score_gpt":0.3676826595633123,"score_spread":0.06903862041842473,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3159371568","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9957294,0.00019922381,0.0031181683,0.00006895991,0.0000033508572,0.0000041182734,0.00009623732,0.00002535406,0.0007551151],"genre_scores_gemma":[0.9988079,0.000059902377,0.0009250566,0.000026781876,0.0000067609685,0.000003513279,0.00007677978,0.000014445011,0.000078808254],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9995783,0.00009683957,0.00002551586,0.00015268354,0.000083510706,0.000063170664],"domain_scores_gemma":[0.99853194,0.0002991303,0.0006357941,0.00016241097,0.00022550383,0.00014532222],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008301321,0.000376085,0.0003345515,0.0011151104,0.00058420707,0.0009149697,0.00053553877,0.00065558666,0.0025127062],"category_scores_gemma":[0.0020505749,0.00027722417,0.0004801846,0.00071156054,0.0015543366,0.00089188915,0.0014005511,0.00087620044,0.00027337793],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00027952308,0.000051098294,0.40665212,0.0003468564,0.00042310116,0.00061658834,0.0018998081,0.0057184123,0.5390658,0.003970676,0.00035592215,0.040620152],"study_design_scores_gemma":[0.0000043496166,0.000076017874,0.98919547,0.000023708602,0.000045076144,0.0005940302,0.00033053616,0.003800403,0.0038666616,0.0014995598,0.0005398138,0.000024347431],"about_ca_topic_score_codex":0.0006825666,"about_ca_topic_score_gemma":0.001935658,"teacher_disagreement_score":0.0025127062,"about_ca_system_score_codex":0.00046217008,"about_ca_system_score_gemma":0.00028904097,"threshold_uncertainty_score":0.008405805},"labels":[],"label_agreement":null},{"id":"W3160045500","doi":"10.1186/s12915-021-01035-y","title":"Single-cell genomics unveils a canonical origin of the diverse mitochondrial genomes of euglenozoans","year":2021,"lang":"en","type":"article","venue":"BMC Biology","topic":"Protist diversity and phylogeny","field":"Biochemistry, Genetics and Molecular Biology","cited_by":21,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"Université de Montréal; Grantová Agentura České Republiky; Ministerstvo Školství, Mládeže a Tělovýchovy; Royal Society","keywords":"Biology; Mitochondrial DNA; Genetics; Genome; Gene; Ribosomal RNA; Trans-splicing; RNA splicing; RNA","score_opus":0.027010987348170003,"score_gpt":0.23839440317249294,"score_spread":0.21138341582432293,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3160045500","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9890394,0.0008830912,0.006761284,0.00008496529,0.0000135893515,0.000010455391,0.002306474,0.00009592892,0.0008048538],"genre_scores_gemma":[0.9795608,0.0007568891,0.013533848,0.0000989381,0.000013140831,0.000016166086,0.005419733,0.000068559486,0.0005318206],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999236,0.0000066303555,0.0000063326993,0.000033771514,0.00001618435,0.000013469838],"domain_scores_gemma":[0.99971944,0.000068696,0.00007408425,0.00004463395,0.000044843357,0.000048244332],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014978512,0.0002707276,0.00021486028,0.0003723114,0.00027224803,0.0005649208,0.00020111285,0.0003395199,0.0006277197],"category_scores_gemma":[0.00044152746,0.00016236829,0.000203199,0.0004976893,0.00024128317,0.00068803533,0.00041480336,0.0004617115,0.00027665912],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00018989219,0.000016824646,0.020687971,0.00021158182,0.000029192232,0.00013230178,0.00027723482,0.00063487137,0.965888,0.00056033325,0.00013545199,0.011236288],"study_design_scores_gemma":[0.000030235498,0.00058709324,0.5527569,0.0002070474,0.0003134084,0.0018010769,0.0017948261,0.018178012,0.3736343,0.0040020477,0.04662912,0.0000659101],"about_ca_topic_score_codex":0.0005776794,"about_ca_topic_score_gemma":0.0014258139,"teacher_disagreement_score":0.0006277197,"about_ca_system_score_codex":0.0002555494,"about_ca_system_score_gemma":0.00023430688,"threshold_uncertainty_score":0.0020999312},"labels":[],"label_agreement":null},{"id":"W3160804663","doi":"10.1186/s12915-021-01018-z","title":"Apoptosis is not conserved in plants as revealed by critical examination of a model for plant apoptosis-like cell death","year":2021,"lang":"en","type":"article","venue":"BMC Biology","topic":"Cell death mechanisms and regulation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":33,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Natural Sciences and Engineering Research Council of Canada; Russian Science Foundation; Knut och Alice Wallenbergs Stiftelse; H2020 Marie Skłodowska-Curie Actions; Carl Tryggers Stiftelse för Vetenskaplig Forskning; Svenska Forskningsrådet Formas; Vetenskapsrådet; Stiftelsen för Strategisk Forskning","keywords":"Programmed cell death; Apoptosis; Biology; Cell biology; Fragmentation (computing); Plant cell; Caspase; Cell; DNA fragmentation; Protoplast; Phagocytosis; Botany; Biochemistry; Ecology","score_opus":0.03620325909069287,"score_gpt":0.2870428483203675,"score_spread":0.25083958922967464,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3160804663","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9640673,0.0025740287,0.029460354,0.00021992208,0.000049789942,0.000052106163,0.00026164803,0.00020605302,0.0031088372],"genre_scores_gemma":[0.9942311,0.000519031,0.0038749338,0.00003615552,0.0000055871033,0.000028381986,0.00021199317,0.00000891707,0.0010839263],"study_design_codex":"bench_or_experimental","study_design_gemma":"theoretical_or_conceptual","domain_scores_codex":[0.99992657,0.000010817397,0.000004454638,0.000026231171,0.000018242274,0.00001374965],"domain_scores_gemma":[0.9999213,0.000015389327,0.000028251316,0.000013282596,0.000009930867,0.000011902831],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000094976465,0.0001906095,0.00018529606,0.00020372531,0.00019382281,0.00025050182,0.00023315942,0.00028852088,0.00054173014],"category_scores_gemma":[0.00008750325,0.00008447897,0.00019189164,0.000162862,0.00028012763,0.00019535181,0.000150448,0.0003896265,0.00013757826],"study_design_candidate":"theoretical_or_conceptual","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000056520967,0.0000093339795,0.00039842835,0.000033888246,0.000003030502,0.00018659435,0.000019839194,0.0002988066,0.9971404,0.00095398515,0.000033765504,0.0008655736],"study_design_scores_gemma":[0.0000347713,0.0008446477,0.02880162,0.00002781067,0.00004803178,0.0026889148,0.00020294408,0.027547445,0.91610885,0.0055644982,0.018106539,0.00002395704],"about_ca_topic_score_codex":0.00024575673,"about_ca_topic_score_gemma":0.00020347604,"teacher_disagreement_score":0.00054173014,"about_ca_system_score_codex":0.00038505282,"about_ca_system_score_gemma":0.00009677843,"threshold_uncertainty_score":0.0027937293},"labels":[],"label_agreement":null},{"id":"W3165852099","doi":"10.1186/s12915-021-01025-0","title":"The epigenetic regulator G9a attenuates stress-induced resistance and metabolic transcriptional programs across different stressors and species","year":2021,"lang":"en","type":"article","venue":"BMC Biology","topic":"Invertebrate Immune Response Mechanisms","field":"Immunology and Microbiology","cited_by":15,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University","funders":"Natural Sciences and Engineering Research Council of Canada; Nederlandse Organisatie voor Wetenschappelijk Onderzoek; ZonMw; Universities Space Research Association","keywords":"Biology; Epigenetics; Gene; Genetics; Cell biology","score_opus":0.027167396186528168,"score_gpt":0.2522046176082328,"score_spread":0.22503722142170465,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3165852099","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8997654,0.0065353336,0.0027532158,0.0002972278,0.000088463545,0.000046190402,0.087430336,0.0011639347,0.0019198772],"genre_scores_gemma":[0.8176859,0.0031009032,0.0060523553,0.00058174826,0.000033279783,0.00014237495,0.17005727,0.00021178028,0.0021343895],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99974996,0.000020073483,0.00001582036,0.00014107957,0.000038466853,0.000034594545],"domain_scores_gemma":[0.9997981,0.000043460957,0.00007428876,0.000032669304,0.000026927011,0.000024534676],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00022106431,0.000387543,0.00049116183,0.0006552425,0.00029625552,0.00044822204,0.0002596254,0.00031368402,0.0015215403],"category_scores_gemma":[0.00051044667,0.00013706156,0.0005630487,0.00070129934,0.00021737067,0.0002636123,0.0004209292,0.00042099901,0.0005976742],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0020318984,0.00011300328,0.095269784,0.0015329869,0.0008288489,0.00017327344,0.00011495964,0.0031201493,0.8471342,0.00046434856,0.007871759,0.041344743],"study_design_scores_gemma":[0.00015825487,0.0007250098,0.6986787,0.00017289212,0.0010645222,0.00054906704,0.00023521937,0.010499251,0.23719892,0.0011547926,0.04947569,0.000087684],"about_ca_topic_score_codex":0.0027200617,"about_ca_topic_score_gemma":0.005520475,"teacher_disagreement_score":0.0027200617,"about_ca_system_score_codex":0.00042013623,"about_ca_system_score_gemma":0.00036592493,"threshold_uncertainty_score":0.005408466},"labels":[],"label_agreement":null},{"id":"W3167483544","doi":"10.1186/s12915-021-01046-9","title":"The Wnt-specific astacin proteinase HAS-7 restricts head organizer formation in Hydra","year":2021,"lang":"en","type":"article","venue":"BMC Biology","topic":"Marine Invertebrate Physiology and Ecology","field":"Earth and Planetary Sciences","cited_by":26,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba","funders":"Canadian Institutes of Health Research; Universität Heidelberg; Deutsche Forschungsgemeinschaft","keywords":"Lernaean Hydra; Biology; Wnt signaling pathway; Cell biology; Xenopus; Zebrafish; Gene knockdown; Signal transduction; Genetics; Cell culture; Gene","score_opus":0.041356824620973585,"score_gpt":0.22779769075507705,"score_spread":0.18644086613410346,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3167483544","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99562824,0.0006284769,0.00201006,0.00005371866,0.000011844123,0.000014205765,0.0003892354,0.000055358683,0.0012088519],"genre_scores_gemma":[0.99410456,0.00033890438,0.0014068842,0.00003685064,0.000004846063,0.000021140386,0.0005970015,0.000046843972,0.0034430965],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999255,0.0000057229395,0.0000060107704,0.000018188886,0.0000279496,0.000016716198],"domain_scores_gemma":[0.9998772,0.00001766853,0.00003536459,0.000011502276,0.00001341665,0.000044695902],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00006623064,0.00022560361,0.00021830907,0.00019046887,0.00015705258,0.00030824254,0.00019812808,0.00021897095,0.0013604072],"category_scores_gemma":[0.00007969983,0.0002405924,0.0002649735,0.000091012014,0.00035073323,0.00014975299,0.0004642763,0.00043288045,0.0005871959],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000025647256,0.0000019016837,0.00022301123,0.000016239062,0.0000022645681,0.000021714648,0.0000055211126,0.000027143647,0.9994362,0.00003356284,0.000014014189,0.00019282111],"study_design_scores_gemma":[0.000011551308,0.00009094441,0.025328709,0.000007855776,0.000018851066,0.00025606353,0.000068686684,0.0017525548,0.9694473,0.00006484323,0.0029460469,0.000006590316],"about_ca_topic_score_codex":0.0011830673,"about_ca_topic_score_gemma":0.0022129694,"teacher_disagreement_score":0.0013604072,"about_ca_system_score_codex":0.0003786361,"about_ca_system_score_gemma":0.00030566,"threshold_uncertainty_score":0.004551053},"labels":[],"label_agreement":null},{"id":"W3173341558","doi":"10.1186/s12915-021-01059-4","title":"The adaptive benefit of evolved increases in hemoglobin-O2 affinity is contingent on tissue O2 diffusing capacity in high-altitude deer mice","year":2021,"lang":"en","type":"article","venue":"BMC Biology","topic":"High Altitude and Hypoxia","field":"Biochemistry, Genetics and Molecular Biology","cited_by":24,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"National Heart, Lung, and Blood Institute; Natural Sciences and Engineering Research Council of Canada; National Institutes of Health; National Science Foundation","keywords":"Biology; Peromyscus; Hemoglobin; Population; Cardiorespiratory fitness; Hypoxia (environmental); Effects of high altitude on humans; Aerobic capacity; Rodent; Phenotype; Diffusing capacity; Gene; Genetics; Oxygen; Internal medicine; Biochemistry; Ecology; Physiology; Anatomy; Chemistry","score_opus":0.02987622803498188,"score_gpt":0.2595517667965535,"score_spread":0.22967553876157162,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3173341558","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99853945,0.00003681676,0.001250504,0.000019733261,0.0000015472966,0.0000022087763,0.00006515676,0.000011062286,0.00007340506],"genre_scores_gemma":[0.99756974,0.00007495844,0.0017829171,0.000036243353,0.0000033301856,0.00001992937,0.00009716936,0.000020736194,0.0003949411],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99988747,0.000034195,0.000011280702,0.000031344698,0.000016892627,0.00001873667],"domain_scores_gemma":[0.9997069,0.000087643246,0.00009698087,0.00003073482,0.000016770964,0.00006084741],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00027802223,0.00042093117,0.00023027694,0.0002475612,0.00011783939,0.00036798543,0.00025255317,0.00030017272,0.00087297417],"category_scores_gemma":[0.0002669468,0.000177327,0.00036643652,0.00010612868,0.000303838,0.00015148966,0.000293273,0.000655916,0.000073731964],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00043984057,0.00008426925,0.0041623777,0.000019935558,0.000034686458,0.000051846426,0.000020000914,0.0015309209,0.9925323,0.00026601437,0.0000216903,0.0008361662],"study_design_scores_gemma":[0.00021045194,0.0024758745,0.10158637,0.000023574072,0.00029481802,0.0008554145,0.00023200877,0.058755696,0.8327471,0.0012797496,0.0014794193,0.000059448106],"about_ca_topic_score_codex":0.00052371854,"about_ca_topic_score_gemma":0.0005401887,"teacher_disagreement_score":0.00087297417,"about_ca_system_score_codex":0.00023886852,"about_ca_system_score_gemma":0.00013392017,"threshold_uncertainty_score":0.0029203892},"labels":[],"label_agreement":null},{"id":"W3180781073","doi":"10.1186/s12915-021-01069-2","title":"Innate antiviral defense demonstrates high energetic efficiency in a bony fish","year":2021,"lang":"en","type":"article","venue":"BMC Biology","topic":"Physiological and biochemical adaptations","field":"Environmental Science","cited_by":28,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ministry of Agriculture; University of British Columbia; Fisheries and Oceans Canada","funders":"Fisheries and Oceans Canada","keywords":"Biology; Viral load; Virulence; Interferon; Innate immune system; Transcriptome; Anaerobic exercise; Respiratory system; Virology; Immunology; Homeostasis; Virus; Microbiology; Gene; Physiology; Immune system; Gene expression; Cell biology; Genetics; Anatomy","score_opus":0.015252369605386465,"score_gpt":0.2257326911112259,"score_spread":0.21048032150583945,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3180781073","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99936336,0.000059515904,0.00018110129,0.000013227364,0.0000024215872,0.0000037821717,0.000075865086,0.0000039680235,0.00029677153],"genre_scores_gemma":[0.998601,0.000057491136,0.00035571505,0.000028659437,0.0000026909765,0.00001815409,0.00018886101,0.000004103723,0.000743123],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99989676,0.0000068827117,0.0000068687846,0.000040852854,0.000019571751,0.000029069108],"domain_scores_gemma":[0.9998716,0.000014024092,0.000050395356,0.000010885589,0.000023034794,0.000030036534],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013154394,0.0002256273,0.00019307138,0.000310416,0.00025342757,0.00022400785,0.00013494052,0.00023173213,0.0017408296],"category_scores_gemma":[0.00015891207,0.00015567552,0.00023815424,0.00014973144,0.0004654069,0.00016033654,0.00036110915,0.00021059712,0.00026653986],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00039890016,0.000023020055,0.0442396,0.000062054045,0.000017739172,0.00010968144,0.00014433889,0.00008603775,0.9528182,0.00007832892,0.00004312981,0.0019789636],"study_design_scores_gemma":[0.000028127168,0.0020664267,0.9161655,0.000019818775,0.00006395554,0.00057036337,0.0008383094,0.0006946824,0.07846733,0.00017872501,0.00088305824,0.000023699502],"about_ca_topic_score_codex":0.0024898683,"about_ca_topic_score_gemma":0.004057541,"teacher_disagreement_score":0.0024898683,"about_ca_system_score_codex":0.00044425033,"about_ca_system_score_gemma":0.00032910216,"threshold_uncertainty_score":0.005823672},"labels":[],"label_agreement":null},{"id":"W3185964176","doi":"10.1186/s12915-021-01078-1","title":"Genomics and transcriptomics yields a system-level view of the biology of the pathogen Naegleria fowleri","year":2021,"lang":"en","type":"article","venue":"BMC Biology","topic":"Legionella and Acanthamoeba research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":36,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University; University of Alberta","funders":"College of Medicine, University of Cincinnati; Centro de Investigación Biomédica en Red Enfermedades Cardiovasculares; Faculty of Medicine and Dentistry, University of Alberta; Akademie Věd České Republiky; Alberta Heritage Foundation for Medical Research; Canada Research Chairs; Dalhousie University; Commonwealth Scientific and Industrial Research Organisation; University of Alberta; School of Medicine, Virginia Commonwealth University; Univerzita Karlova v Praze; Virginia Commonwealth University; University of Bern; Ostravská Univerzita v Ostravě; Grantová Agentura České Republiky; Biologické Centrum, Akademie Věd České Republiky; Inselspital, Universitätsspital Bern; Přírodovědecká Fakulta, Univerzita Karlova; University of Cincinnati; Cincinnati Children's Hospital Medical Center","keywords":"Biology; Naegleria fowleri; Pathogen; Transcriptome; Genomics; Naegleria; Computational biology; Protozoa; Genome; Microbiology; Genetics; Gene; Virology; Gene expression","score_opus":0.034701634746834055,"score_gpt":0.26891260585119464,"score_spread":0.2342109711043606,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3185964176","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.84672624,0.011375363,0.11504981,0.0020255477,0.00025010767,0.0001502282,0.016056282,0.0009082343,0.007458139],"genre_scores_gemma":[0.8750202,0.009374381,0.094214104,0.0009646798,0.00013338494,0.00022333594,0.01654074,0.00019756396,0.0033315623],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99980205,0.000022134354,0.00001230612,0.000088281864,0.000047623445,0.000027577613],"domain_scores_gemma":[0.99982315,0.000057799018,0.00003879947,0.00002641537,0.000035522822,0.000018271132],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003648764,0.0006537729,0.00044992106,0.00044641257,0.00032824927,0.00094331364,0.00023114738,0.00060521014,0.00075592264],"category_scores_gemma":[0.00025646767,0.00020590097,0.00054420053,0.00049037125,0.00041313333,0.00081362086,0.00040245723,0.00078093325,0.0003797998],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000073517294,0.000018887105,0.002443459,0.00023293222,0.000028123217,0.00007478143,0.000070826136,0.00049293315,0.99102193,0.0005069557,0.00013947072,0.0048962873],"study_design_scores_gemma":[0.000031164418,0.00079594826,0.20880061,0.0002917009,0.00049628806,0.0014047548,0.0011118614,0.027456878,0.70071024,0.010511359,0.048277188,0.00011204216],"about_ca_topic_score_codex":0.00095496187,"about_ca_topic_score_gemma":0.0014843019,"teacher_disagreement_score":0.00095496187,"about_ca_system_score_codex":0.0006459004,"about_ca_system_score_gemma":0.0004677349,"threshold_uncertainty_score":0.004686415},"labels":[],"label_agreement":null},{"id":"W3186553905","doi":"10.1186/s12915-021-01105-1","title":"The relationship between sternum variation and mode of locomotion in birds","year":2021,"lang":"en","type":"article","venue":"BMC Biology","topic":"Paleontology and Evolutionary Biology","field":"Earth and Planetary Sciences","cited_by":47,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Royal Ontario Museum; University of Toronto","funders":"Horizon 2020; European Commission; Natural Sciences and Engineering Research Council of Canada; University of Bristol; University of Oxford; Yale University","keywords":"Sternum; Biology; Keel; Allometry; Morphometrics; Variation (astronomy); Troglodytes; Anatomy; Evolutionary biology; Zoology; Ecology","score_opus":0.04630561083693061,"score_gpt":0.2725374547298763,"score_spread":0.22623184389294568,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3186553905","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99850345,0.00011577473,0.0006916882,0.000012897036,0.0000023322345,0.0000026475964,0.0003365112,0.000012538825,0.00032203938],"genre_scores_gemma":[0.999111,0.000023395933,0.00049309875,0.0000044221656,0.0000034554118,0.0000036516512,0.0002938721,0.0000058842083,0.00006122739],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99972063,0.00006687908,0.000023067454,0.0001247475,0.000039608305,0.000025073967],"domain_scores_gemma":[0.9981464,0.00065606175,0.0007140865,0.00020514702,0.00013956949,0.00013882756],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005538136,0.00020070196,0.00017471268,0.0010185946,0.00020091028,0.00043549208,0.00022480378,0.00026282878,0.002251544],"category_scores_gemma":[0.0025586453,0.00013127792,0.00027957905,0.00069687987,0.0004656552,0.00025802903,0.0005240613,0.00021948537,0.00033601114],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00005343503,0.0000066630823,0.9916767,0.000018755545,0.00008757467,0.000020956133,0.00011553453,0.00026616908,0.003452759,0.000072517876,0.00006898856,0.0041598855],"study_design_scores_gemma":[5.5290724e-7,0.000012652148,0.9992143,0.000002426517,0.000006562095,0.000095387324,0.000049964776,0.00038962276,0.000091185684,0.00006526008,0.00006999469,0.0000021726469],"about_ca_topic_score_codex":0.0009284485,"about_ca_topic_score_gemma":0.002027452,"teacher_disagreement_score":0.002251544,"about_ca_system_score_codex":0.00012231832,"about_ca_system_score_gemma":0.00008013323,"threshold_uncertainty_score":0.0075321198},"labels":[],"label_agreement":null},{"id":"W3193682442","doi":"10.1186/s12915-021-01077-2","title":"Unexpected organellar locations of ESCRT machinery in Giardia intestinalis and complex evolutionary dynamics spanning the transition to parasitism in the lineage Fornicata","year":2021,"lang":"en","type":"article","venue":"BMC Biology","topic":"Cellular transport and secretion","field":"Biochemistry, Genetics and Molecular Biology","cited_by":28,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University; University of Alberta","funders":"Canadian Institutes of Health Research; Natural Sciences and Engineering Research Council of Canada; Universität Zürich; Functional Genomics Center Zurich; Schweizerischer Nationalfonds zur Förderung der Wissenschaftlichen Forschung; Alberta Innovates; University of Bern; Swiss Re Foundation; National Science Foundation","keywords":"ESCRT; Biology; Endosome; Most recent common ancestor; Cell biology; Endocytic cycle; Genome; TSG101; Vacuole; Genetics; Gene; Microvesicles; Endocytosis; Cytoplasm","score_opus":0.018922007769443253,"score_gpt":0.26080243961905947,"score_spread":0.24188043184961622,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3193682442","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9932087,0.0017227975,0.0015502052,0.00006575283,0.00001082856,0.000018780778,0.0020814089,0.000085521424,0.0012561315],"genre_scores_gemma":[0.9895783,0.0007153224,0.004051215,0.00007956186,0.000012088628,0.0000333109,0.004503424,0.00003871483,0.0009881225],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99987316,0.0000070086903,0.000008575017,0.00006984507,0.000015768095,0.000025610725],"domain_scores_gemma":[0.9997677,0.000031355747,0.000092160975,0.000031391468,0.00003421573,0.000043178137],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00010248048,0.00031533738,0.00023479687,0.00086783787,0.00036733996,0.00051234313,0.0001594775,0.00045272955,0.0007875399],"category_scores_gemma":[0.00018896279,0.0001540706,0.00028497158,0.0006736234,0.00028417364,0.00030678103,0.00043169424,0.00040545876,0.0003014061],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000098156124,0.000011764124,0.01967878,0.0001249241,0.000022863318,0.0002929266,0.00027725907,0.000057133853,0.97534686,0.000111023255,0.0000644532,0.0039139045],"study_design_scores_gemma":[0.000007685357,0.0002146981,0.9274933,0.000061301325,0.00015097487,0.0023091314,0.00068698014,0.00059025676,0.057692375,0.00032527655,0.010441639,0.000026440457],"about_ca_topic_score_codex":0.0007545775,"about_ca_topic_score_gemma":0.0015981947,"teacher_disagreement_score":0.00086783787,"about_ca_system_score_codex":0.0002327381,"about_ca_system_score_gemma":0.00016225949,"threshold_uncertainty_score":0.0026345253},"labels":[],"label_agreement":null},{"id":"W3195366365","doi":"10.1186/s12915-021-01085-2","title":"An economical and highly adaptable optogenetics system for individual and population-level manipulation of Caenorhabditis elegans","year":2021,"lang":"en","type":"article","venue":"BMC Biology","topic":"Genetics, Aging, and Longevity in Model Organisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":12,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"FP7 Ideas: European Research Council; Canadian Institutes of Health Research; National Cancer Institute; National Institutes of Health; Ministère de l'Économie, de la Science et de l'Innovation - Québec; Cancer Research UK; U.S. Department of Defense","keywords":"Optogenetics; Neuroscience; Biology; Population; Caenorhabditis elegans; Stimulus (psychology); Biological neural network","score_opus":0.03745850310154422,"score_gpt":0.26443700616998633,"score_spread":0.2269785030684421,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3195366365","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.56925154,0.0012489646,0.4190247,0.00044724264,0.00029797983,0.0013926518,0.0021816313,0.00327001,0.0028852937],"genre_scores_gemma":[0.56482524,0.0008076627,0.42596483,0.00025131615,0.000054112195,0.0019097121,0.001036836,0.00030368686,0.004846563],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997003,0.000015326248,0.00003334646,0.00008739336,0.00012831275,0.000035306606],"domain_scores_gemma":[0.9998124,0.000027125108,0.00006785156,0.00003228189,0.000027499373,0.000032796765],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003258708,0.00054913864,0.00032669047,0.00040839278,0.00027173435,0.00027072272,0.00073024334,0.00044684878,0.00086514343],"category_scores_gemma":[0.000260178,0.00030704908,0.0004126278,0.00015384819,0.00035726003,0.00032369746,0.00047303454,0.0006863621,0.00036275637],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000022225227,0.000017560938,0.0002494503,0.000040338633,0.00000550964,0.000031982756,0.000008886653,0.00021017103,0.9939307,0.00017328652,0.00011635105,0.0051935124],"study_design_scores_gemma":[0.00003543874,0.00029641157,0.003916213,0.000018980809,0.000042451,0.00037437002,0.000009374959,0.0059796153,0.9817218,0.000072648065,0.007492158,0.000040522133],"about_ca_topic_score_codex":0.00074520335,"about_ca_topic_score_gemma":0.0011515855,"teacher_disagreement_score":0.00086514343,"about_ca_system_score_codex":0.000434754,"about_ca_system_score_gemma":0.0005463361,"threshold_uncertainty_score":0.003154397},"labels":[],"label_agreement":null},{"id":"W3197119269","doi":"10.1186/s12915-021-01094-1","title":"Large-scale genomic analysis of antimicrobial resistance in the zoonotic pathogen Streptococcus suis","year":2021,"lang":"en","type":"article","venue":"BMC Biology","topic":"Streptococcal Infections and Treatments","field":"Medicine","cited_by":89,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal","funders":"Biotechnology and Biological Sciences Research Council; Royal Society; Medical Research Council; Deutsche Forschungsgemeinschaft; Isaac Newton Trust; Wellcome Trust","keywords":"Biology; Antibiotic resistance; Streptococcus suis; Antimicrobial; Transmission (telecommunications); Drug resistance; Livestock; Multiple drug resistance; Genome; Disease; Microbiology; Genetics; Antibiotics; Gene; Virulence; Ecology","score_opus":0.022630529724890644,"score_gpt":0.29880216828264167,"score_spread":0.276171638557751,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3197119269","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98846126,0.00034548392,0.0037844584,0.000091161055,0.000013096948,0.00008611798,0.006320937,0.00006131597,0.0008361935],"genre_scores_gemma":[0.97088146,0.00025206865,0.010178874,0.00022451032,0.00002064775,0.000120116725,0.017541528,0.00005505883,0.0007258276],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99968946,0.000060060946,0.000017775363,0.000101862795,0.000075680604,0.00005517398],"domain_scores_gemma":[0.99928373,0.0003063473,0.00016224073,0.000050493847,0.00010792905,0.00008926973],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003909134,0.0003877625,0.00041192365,0.0011011861,0.00029915993,0.00044792323,0.00025609016,0.00039662624,0.0011955019],"category_scores_gemma":[0.0008471281,0.00017583507,0.0007451987,0.0012308857,0.00028179432,0.00014168305,0.0005263953,0.0006881613,0.00035494898],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005352975,0.00031575974,0.069623195,0.00034105594,0.00035578778,0.0005025755,0.00056699704,0.0012157542,0.9117411,0.00023096398,0.00046499787,0.014106474],"study_design_scores_gemma":[0.000037048856,0.00076276064,0.9603258,0.000031798005,0.00025834356,0.00088653585,0.00042274984,0.0026768616,0.030332377,0.00027826472,0.003958386,0.000029018147],"about_ca_topic_score_codex":0.0015340135,"about_ca_topic_score_gemma":0.0031524713,"teacher_disagreement_score":0.0015340135,"about_ca_system_score_codex":0.000281265,"about_ca_system_score_gemma":0.00034447285,"threshold_uncertainty_score":0.003999293},"labels":[],"label_agreement":null},{"id":"W3198048496","doi":"10.1186/s12915-021-01132-y","title":"Pathologic tau conformer ensembles induce dynamic, liquid-liquid phase separation events at the nuclear envelope","year":2021,"lang":"en","type":"article","venue":"BMC Biology","topic":"Alzheimer's disease research and treatments","field":"Medicine","cited_by":32,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"National Institute on Aging; University Hospital Foundation; Alberta Innovates; Alberta Innovates Bio Solutions; Canada Foundation for Innovation; Canada Research Chairs; Canadian Institutes of Health Research; Alzheimer Society","keywords":"Biology; Envelope (radar); Conformational isomerism; Separation (statistics); Phase (matter); Biophysics; Physics; Molecule","score_opus":0.05090077126515936,"score_gpt":0.38373237595673765,"score_spread":0.3328316046915783,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3198048496","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99613225,0.0001705746,0.0030487077,0.000021742082,0.0000039438946,0.000015786822,0.00010849384,0.0000580342,0.00044054008],"genre_scores_gemma":[0.9981755,0.00006460864,0.0010953373,0.000020652999,0.0000025862341,0.000020127181,0.00015471663,0.000013178898,0.00045332118],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999304,0.000010287254,0.000005302499,0.000018794082,0.000018477844,0.000016801563],"domain_scores_gemma":[0.9998915,0.000027171141,0.000034728666,0.000010631406,0.000018110673,0.00001784226],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009862936,0.00018125279,0.00012520277,0.00020575536,0.00012390169,0.0002552784,0.000108595974,0.00018029874,0.00057614065],"category_scores_gemma":[0.00016620226,0.0001201225,0.000116844334,0.000092197195,0.00023009173,0.00019775984,0.00020290511,0.0003334844,0.00014257792],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00004613168,0.0000074913214,0.00036310888,0.0000075892463,0.0000028083882,0.000053583648,0.000018412937,0.00005158045,0.9991136,0.00004606802,0.000010637804,0.0002788926],"study_design_scores_gemma":[0.0000071087848,0.00009237875,0.0072335904,0.0000033747845,0.000006680532,0.00021424695,0.000036520847,0.0014692945,0.990473,0.000111545196,0.00034886226,0.0000034511766],"about_ca_topic_score_codex":0.0005095439,"about_ca_topic_score_gemma":0.00048204773,"teacher_disagreement_score":0.00057614065,"about_ca_system_score_codex":0.00020802903,"about_ca_system_score_gemma":0.0000909485,"threshold_uncertainty_score":0.0019273758},"labels":[],"label_agreement":null},{"id":"W3199599382","doi":"10.1186/s12915-021-01143-9","title":"Control of vein-forming, striped gene expression by auxin signaling","year":2021,"lang":"en","type":"article","venue":"BMC Biology","topic":"Plant Molecular Biology Research","field":"Agricultural and Biological Sciences","cited_by":12,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia, Okanagan Campus; University of Alberta","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Biology; Transcription factor; Gene; Gene expression; Regulation of gene expression; Auxin; Psychological repression; Cell biology; Arabidopsis; Homeobox; Genetics; Promoter; Mutant","score_opus":0.02885387686344692,"score_gpt":0.262648344850827,"score_spread":0.23379446798738007,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3199599382","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98802,0.0010103369,0.0077615385,0.00006303121,0.0000150402575,0.000018833289,0.0004534786,0.00012081944,0.0025368752],"genre_scores_gemma":[0.99567634,0.00024510678,0.0021111257,0.000038618724,0.0000070198985,0.000014586756,0.00035751975,0.000020476458,0.0015292804],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999001,0.000013670615,0.0000053077015,0.00003910175,0.000018372419,0.000023451219],"domain_scores_gemma":[0.99990296,0.00001900654,0.000030175463,0.000011883445,0.000011185405,0.000024772777],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000075911856,0.00022271113,0.000118284755,0.00013008664,0.00011200925,0.00028752928,0.00016087989,0.00016028289,0.0013906823],"category_scores_gemma":[0.000090012705,0.00013002698,0.00013822864,0.00010208001,0.00020243398,0.000121587334,0.00029494448,0.00025869216,0.00050799013],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000028345241,0.00000343638,0.0002824711,0.0000108780705,8.182505e-7,0.000009056263,0.0000034928057,0.00002429677,0.9990019,0.000078436926,0.000012115336,0.00054478605],"study_design_scores_gemma":[0.000029113935,0.00014526167,0.032738212,0.000013153388,0.000012466187,0.00029575106,0.000046086883,0.0030627947,0.9600553,0.00032793402,0.0032666926,0.0000072523476],"about_ca_topic_score_codex":0.0001847636,"about_ca_topic_score_gemma":0.0003902192,"teacher_disagreement_score":0.0013906823,"about_ca_system_score_codex":0.00027965795,"about_ca_system_score_gemma":0.000090318885,"threshold_uncertainty_score":0.0046523213},"labels":[],"label_agreement":null},{"id":"W3202112884","doi":"10.1186/s12915-021-01154-6","title":"Channel nuclear pore protein 54 directs sexual differentiation and neuronal wiring of female reproductive behaviors in Drosophila","year":2021,"lang":"en","type":"article","venue":"BMC Biology","topic":"Nuclear Structure and Function","field":"Biochemistry, Genetics and Molecular Biology","cited_by":30,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Winnipeg","funders":"Biotechnology and Biological Sciences Research Council; Natural Sciences and Engineering Research Council of Canada; University of Cambridge","keywords":"Biology; Sexual differentiation; Mating; Gene; Genetics; Cell biology; Drosophila melanogaster","score_opus":0.012980465869908432,"score_gpt":0.23471020569837972,"score_spread":0.2217297398284713,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3202112884","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99631894,0.0004548784,0.0019522196,0.00006897113,0.00001419201,0.000010618544,0.00017666277,0.000067772125,0.0009357795],"genre_scores_gemma":[0.9967179,0.00020715731,0.0012524194,0.00004707981,0.0000035713408,0.000017930663,0.0001718533,0.00003419519,0.0015480095],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.999892,0.000010373691,0.000010675708,0.000032498905,0.000032552285,0.00002185649],"domain_scores_gemma":[0.99979764,0.000033661636,0.00008410367,0.000017135864,0.000019435709,0.00004806564],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00007747794,0.0002716618,0.00018238608,0.00018698444,0.00015584365,0.00024101348,0.0003058305,0.0002967287,0.0014473282],"category_scores_gemma":[0.00018283584,0.00014390376,0.0001679047,0.000053077358,0.00034676315,0.00023612885,0.00034560985,0.00047289522,0.0003423228],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00002309122,0.0000046559167,0.00028223408,0.000013382281,0.0000017935474,0.000035308192,0.0000072709513,0.000036110152,0.99897313,0.000053166685,0.00001278044,0.00055707846],"study_design_scores_gemma":[0.000020977383,0.0001220184,0.021066137,0.000010938925,0.000020094183,0.0004607584,0.00005266426,0.0014836898,0.9750225,0.00010868615,0.0016249574,0.000006651011],"about_ca_topic_score_codex":0.000661752,"about_ca_topic_score_gemma":0.0010062002,"teacher_disagreement_score":0.0014473282,"about_ca_system_score_codex":0.00048015508,"about_ca_system_score_gemma":0.00021674813,"threshold_uncertainty_score":0.004841745},"labels":[],"label_agreement":null},{"id":"W3204258664","doi":"10.1186/s12915-021-01158-2","title":"The transposable element-rich genome of the cereal pest Sitophilus oryzae","year":2021,"lang":"en","type":"preprint","venue":"BMC Biology","topic":"Insect symbiosis and bacterial influences","field":"Agricultural and Biological Sciences","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"European Regional Development Fund; Institut National de Recherche pour l'Agriculture, l'Alimentation et l'Environnement; Université de Paris; Sorbonne Université; Université de Lyon; Région Auvergne-Rhône-Alpes; Université Paris-Est Créteil Val-de-Marne; Institute for Research in Biomedicine; Ministerio de Economía y Competitividad; Institut National des Sciences Appliquées de Lyon; Centre National de la Recherche Scientifique; Fundación para el Fomento de la Investigación Sanitaria y Biomédica de la Comunitat Valenciana; Institució Catalana de Recerca i Estudis Avançats; Centre de Coopération Internationale en Recherche Agronomique pour le Développement; École Polytechnique Fédérale de Lausanne; University of Melbourne; National Human Genome Research Institute; Agence Nationale de la Recherche; Ministerio de Ciencia, Innovación y Universidades","keywords":"Sitophilus; Biology; Endosymbiosis; Rice weevil; Curculionidae; Genome; Transposable element; PEST analysis; Xanthomonas oryzae; Host (biology); Insect; Botany; Gene; Genetics; Plastid; Chloroplast","score_opus":0.025389729653893092,"score_gpt":0.22807641197337272,"score_spread":0.20268668231947962,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3204258664","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9665259,0.0013400216,0.00568134,0.000105522755,0.0000302094,0.00005581975,0.024995144,0.00035853844,0.0009075747],"genre_scores_gemma":[0.88713956,0.0010361458,0.025280591,0.00013221591,0.00003289178,0.00010988704,0.08394527,0.00021546564,0.0021080584],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.999926,0.0000058030123,0.000005704862,0.000033787474,0.000016720525,0.00001200691],"domain_scores_gemma":[0.9998654,0.00003023834,0.000038779686,0.000014677534,0.000026141886,0.000024773337],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00010570681,0.00042602976,0.00024395122,0.0004907271,0.00019938036,0.00019725422,0.00015020961,0.00026503162,0.0011226733],"category_scores_gemma":[0.0002427255,0.00013880624,0.00034262709,0.00069621875,0.00010424295,0.00018207419,0.00021437122,0.00037477346,0.0004958225],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002940227,0.000020823369,0.0051884926,0.00022015402,0.00003991825,0.00014921247,0.00010260565,0.00023762409,0.9872913,0.000060652852,0.00020288039,0.0061924225],"study_design_scores_gemma":[0.00012707393,0.0010579819,0.6502824,0.00016024252,0.0006552609,0.003851917,0.000688698,0.005233062,0.29969573,0.0006412617,0.037541926,0.00006445065],"about_ca_topic_score_codex":0.0014364654,"about_ca_topic_score_gemma":0.0018298764,"teacher_disagreement_score":0.0014364654,"about_ca_system_score_codex":0.00020704279,"about_ca_system_score_gemma":0.00031344427,"threshold_uncertainty_score":0.0037557483},"labels":[],"label_agreement":null},{"id":"W3206836705","doi":"10.1186/s12915-021-01155-5","title":"The mitochondrially-localized nucleoside diphosphate kinase D (NME4) is a novel metastasis suppressor","year":2021,"lang":"en","type":"article","venue":"BMC Biology","topic":"Mechanisms of cancer metastasis","field":"Biochemistry, Genetics and Molecular Biology","cited_by":39,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Cancéropôle Ile de France; Institut National Du Cancer; Groupement des Entreprises Françaises dans la lutte contre le Cancer; Institut Universitaire de France; Fondation pour la Recherche Médicale; Institut National de la Santé et de la Recherche Médicale; Agence Nationale de la Recherche; CNIB","keywords":"Biology; Mitochondrion; Nucleoside-diphosphate kinase; Kinase; Cell biology; Mutant; Epithelial–mesenchymal transition; Wild type; Metastasis; Cancer research; Biochemistry; Cancer; Gene; Genetics","score_opus":0.02259987625237105,"score_gpt":0.2836434617018849,"score_spread":0.2610435854495139,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3206836705","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98299176,0.0025141374,0.011609467,0.00028409075,0.00006974516,0.000054128588,0.00089130644,0.00022625532,0.0013592258],"genre_scores_gemma":[0.9906419,0.0008623576,0.0044843135,0.000043827724,0.000009891684,0.000032945594,0.0010185506,0.000018926788,0.0028872613],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99993145,0.000010348212,0.000006520569,0.000020721853,0.000020459605,0.000010436239],"domain_scores_gemma":[0.99990976,0.00002056756,0.000032152417,0.000008768507,0.00000747861,0.000021232774],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000111333924,0.00041827743,0.00020641008,0.00023743486,0.00019032856,0.00022567612,0.00025064492,0.00039186224,0.0010358804],"category_scores_gemma":[0.00014549529,0.000085749656,0.00020575026,0.00013181541,0.00031133153,0.00013837292,0.00027703,0.00029939046,0.00032350494],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000111652414,0.00001668985,0.00054526207,0.00004618061,0.000006297617,0.00023602601,0.000003467561,0.0001676234,0.9968129,0.00023391157,0.00006505899,0.0017549718],"study_design_scores_gemma":[0.00003372342,0.00016781274,0.0037436623,0.0000052657356,0.00002139237,0.0017060292,0.000016123895,0.0013260283,0.98651856,0.00014498764,0.006310004,0.000006381318],"about_ca_topic_score_codex":0.00029652196,"about_ca_topic_score_gemma":0.00034159634,"teacher_disagreement_score":0.0010358804,"about_ca_system_score_codex":0.00046276546,"about_ca_system_score_gemma":0.00023349957,"threshold_uncertainty_score":0.0034653544},"labels":[],"label_agreement":null},{"id":"W4206365012","doi":"10.1186/s12915-021-01184-0","title":"Conventional laboratory housing increases morbidity and mortality in research rodents: results of a meta-analysis","year":2022,"lang":"en","type":"review","venue":"BMC Biology","topic":"Animal testing and alternatives","field":"Veterinary","cited_by":96,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of British Columbia; University of Guelph","funders":"Natural Sciences and Engineering Research Council of Canada; Universiteit Maastricht","keywords":"Meta-analysis; Anxiety; Disease; Biology; Stroke (engine); Depression (economics); Gerontology; Internal medicine; Medicine; Psychiatry","score_opus":0.8490241385201013,"score_gpt":0.6041377741872105,"score_spread":0.2448863643328908,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4206365012","genre_codex":"review","genre_gemma":"empirical","domain_codex":null,"domain_gemma":"methods","model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":"methods","domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.017243026,0.97848684,0.0009666618,0.0003799447,0.00019497536,0.00024845055,0.0018821025,0.00006228055,0.0005357614],"genre_scores_gemma":[0.5797561,0.4112066,0.0027931929,0.0016415957,0.00040641645,0.0010744841,0.002421913,0.00010777501,0.000591941],"study_design_codex":"meta_analysis","study_design_gemma":"meta_analysis","domain_scores_codex":[0.9856776,0.0062034037,0.0039600367,0.0021371169,0.001459751,0.00056208426],"domain_scores_gemma":[0.9626481,0.028715976,0.004794152,0.0016405368,0.0018308196,0.00037039994],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.016742239,0.0022199305,0.0108578475,0.0046212766,0.00067756063,0.0034740716,0.0021395283,0.002147502,0.004877109],"category_scores_gemma":[0.0408579,0.0013503368,0.039466012,0.006629164,0.0008900253,0.001788632,0.0016214726,0.0019336408,0.00045968388],"study_design_candidate":"meta_analysis","study_design_consensus":"meta_analysis","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0029594195,0.00002490982,0.017600374,0.18715206,0.7831892,0.00018391635,0.00010680614,0.0005343068,0.00021183952,0.00013861527,0.0011677927,0.0067307334],"study_design_scores_gemma":[0.0004918435,0.00014261862,0.011024592,0.0129408715,0.9736995,0.000104368584,0.00004508602,0.00018372384,0.00008950663,0.00017914947,0.0010784623,0.00002030404],"about_ca_topic_score_codex":0.008801602,"about_ca_topic_score_gemma":0.013585498,"teacher_disagreement_score":0.9832578,"about_ca_system_score_codex":0.0020641368,"about_ca_system_score_gemma":0.0021490445,"threshold_uncertainty_score":0.08854252},"labels":[],"label_agreement":null},{"id":"W4206687018","doi":"10.1186/s12915-021-01208-9","title":"Dynamic genetic differentiation drives the widespread structural and functional convergent evolution of snake venom proteinaceous toxins","year":2022,"lang":"en","type":"article","venue":"BMC Biology","topic":"Venomous Animal Envenomation and Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":40,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Australian Research Council; Leukemia and Lymphoma Society of Canada","keywords":"Biology; Viperidae; Venom; Elapidae; Evolutionary biology; Colubridae; Zoology; Ophidia; Snake venom; Ecology","score_opus":0.008675905693316064,"score_gpt":0.22061964270970022,"score_spread":0.21194373701638416,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4206687018","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99813914,0.00015616266,0.00086993823,0.000023128689,0.0000038552707,0.0000056759236,0.00015252116,0.000018712133,0.0006308655],"genre_scores_gemma":[0.99739385,0.0002067042,0.00089766714,0.000056372144,0.000005858821,0.000017654205,0.0007324177,0.000021763182,0.00066768023],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9998759,0.000013262297,0.0000071329923,0.00005258473,0.000027256101,0.000023790386],"domain_scores_gemma":[0.9998323,0.00004286532,0.000056943074,0.000021407934,0.000017790097,0.000028641954],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012614072,0.000182748,0.00016754169,0.00035757603,0.00019734922,0.00046657847,0.00019131452,0.00030183487,0.00078474486],"category_scores_gemma":[0.00022293525,0.00015927735,0.00018609938,0.00030774015,0.00032392776,0.00019049231,0.0005176355,0.0005007581,0.0002527758],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006600614,0.000012316062,0.008099892,0.000033504813,0.0000146815,0.00017155585,0.00014667235,0.00012401163,0.98834515,0.00021231607,0.000047490463,0.002726381],"study_design_scores_gemma":[0.000036739275,0.00027187922,0.90842885,0.00005829478,0.0000888751,0.00205244,0.000984848,0.0059663486,0.07400353,0.0008946762,0.00717548,0.00003802622],"about_ca_topic_score_codex":0.00040749504,"about_ca_topic_score_gemma":0.0011143883,"teacher_disagreement_score":0.00078474486,"about_ca_system_score_codex":0.0002443912,"about_ca_system_score_gemma":0.00013985008,"threshold_uncertainty_score":0.0026252866},"labels":[],"label_agreement":null},{"id":"W4210828385","doi":"10.1186/s12915-022-01241-2","title":"Mutant C. elegans mitofusin leads to selective removal of mtDNA heteroplasmic deletions across generations to maintain fitness","year":2022,"lang":"en","type":"article","venue":"BMC Biology","topic":"Mitochondrial Function and Pathology","field":"Biochemistry, Genetics and Molecular Biology","cited_by":26,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institutes of Health; National Center for Research Resources; University of British Columbia; Israel Science Foundation","keywords":"Heteroplasmy; Biology; Mitochondrial DNA; Genetics; Non-Mendelian inheritance; Phenotype; Mutation; Complementation; Mutant; Gene","score_opus":0.0178444446383818,"score_gpt":0.290721391781335,"score_spread":0.2728769471429532,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4210828385","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9952571,0.00034297776,0.002345441,0.000074848176,0.000028180715,0.000044735676,0.00057698827,0.00016310952,0.0011665621],"genre_scores_gemma":[0.9918134,0.00026499652,0.0035208603,0.00006785881,0.0000066148664,0.00007024536,0.00041622634,0.00007527485,0.0037645649],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998586,0.0000102993945,0.000016296668,0.000040849383,0.00005204823,0.000021809143],"domain_scores_gemma":[0.99964595,0.00004103892,0.00011984405,0.00003275551,0.000028599552,0.00013171486],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00011971713,0.00050847675,0.00022110902,0.00033806948,0.00023803391,0.00018078367,0.00039659842,0.00044685346,0.0015757672],"category_scores_gemma":[0.00013328472,0.00016252551,0.00022589075,0.00008922052,0.00027129246,0.00013568177,0.0003056198,0.0006200564,0.0002965395],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000031570722,0.000019845509,0.00014955361,0.000020000112,0.000003667257,0.0000717423,0.000007894511,0.000039081537,0.99918693,0.00004298252,0.000026733132,0.00040004955],"study_design_scores_gemma":[0.000026894302,0.00027613665,0.017262714,0.000030539974,0.000026197813,0.0006727963,0.00004818061,0.0022944768,0.9771031,0.000063135616,0.002180831,0.000014971946],"about_ca_topic_score_codex":0.0011710916,"about_ca_topic_score_gemma":0.0031643196,"teacher_disagreement_score":0.0015757672,"about_ca_system_score_codex":0.0003624693,"about_ca_system_score_gemma":0.00029123563,"threshold_uncertainty_score":0.0052714944},"labels":[],"label_agreement":null},{"id":"W4220662416","doi":"10.1186/s12915-022-01255-w","title":"Combined use of Oxford Nanopore and Illumina sequencing yields insights into soybean structural variation biology","year":2022,"lang":"en","type":"article","venue":"BMC Biology","topic":"Soybean genetics and cultivation","field":"Agricultural and Biological Sciences","cited_by":25,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Université Laval","funders":"Natural Sciences and Engineering Research Council of Canada; Government of Canada; Fonds de recherche du Québec – Nature et technologies; Carlsbergfondet; Grain Farmers of Ontario; Canadian Field Crop Research Alliance; Genome Canada; Syngenta Canada; Saskatchewan Pulse Growers; Génome Québec; Oxford Nanopore Technologies","keywords":"Biology; Nanopore sequencing; Structural variation; Evolutionary biology; Computational biology; DNA sequencing; Population; Genetics; Genomics; Genome; Gene","score_opus":0.03847881181344269,"score_gpt":0.23260923323814578,"score_spread":0.1941304214247031,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4220662416","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8672499,0.0025338312,0.093510665,0.00039487437,0.00010317888,0.00012306371,0.025104519,0.0015157219,0.009464259],"genre_scores_gemma":[0.7612409,0.0008821958,0.2107709,0.0005042988,0.000034170935,0.00014530148,0.022893632,0.00043162054,0.0030970096],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9992531,0.000060463364,0.00004687345,0.00028165834,0.0002747947,0.00008309084],"domain_scores_gemma":[0.9990977,0.00022785211,0.0001724798,0.00011113153,0.00029464273,0.0000961811],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010055845,0.00049856084,0.00043241028,0.0007311514,0.00042576523,0.00069278426,0.00045820326,0.000475205,0.0017207913],"category_scores_gemma":[0.0012908863,0.0003242491,0.0006524159,0.00083738397,0.0002999636,0.00035429766,0.0008103024,0.00060809444,0.00056807266],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00042750654,0.00008003239,0.09928209,0.0005588257,0.00046417827,0.00023351239,0.00055267557,0.0073680547,0.82758963,0.0018233415,0.0024001421,0.059220053],"study_design_scores_gemma":[0.00007378342,0.0005268994,0.5309062,0.00015143534,0.000660522,0.0011390822,0.0004709728,0.05354717,0.35978624,0.0039606364,0.048576478,0.00020056528],"about_ca_topic_score_codex":0.016113598,"about_ca_topic_score_gemma":0.0648383,"teacher_disagreement_score":0.016113598,"about_ca_system_score_codex":0.00092869235,"about_ca_system_score_gemma":0.0008321659,"threshold_uncertainty_score":0.032039642},"labels":[],"label_agreement":null},{"id":"W4220820490","doi":"10.1186/s12915-022-01263-w","title":"A new lineage of non-photosynthetic green algae with extreme organellar genomes","year":2022,"lang":"en","type":"article","venue":"BMC Biology","topic":"Protist diversity and phylogeny","field":"Biochemistry, Genetics and Molecular Biology","cited_by":22,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"European Regional Development Fund; Ostravská Univerzita v Ostravě; Grantová Agentura České Republiky; Univerzita Karlova v Praze","keywords":"Biology; Plastid; Genome; Lineage (genetic); Genetics; Gene; Chloroplast DNA; Evolutionary biology; Chloroplast","score_opus":0.016125844545061673,"score_gpt":0.21315564749312654,"score_spread":0.19702980294806488,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4220820490","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99459416,0.0007027768,0.0031786344,0.000048864415,0.000014940301,0.000025720286,0.00042536046,0.000056269047,0.0009532866],"genre_scores_gemma":[0.9844801,0.0006179745,0.009355109,0.00015907933,0.000024731782,0.00009457876,0.003362844,0.000042693096,0.0018628675],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9998375,0.000007889456,0.000012707068,0.000081696686,0.000028980474,0.000031110547],"domain_scores_gemma":[0.99962294,0.00006348719,0.000081922946,0.00007973238,0.0000679745,0.00008397926],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00017755339,0.00025791468,0.00032575743,0.00054842513,0.00053228356,0.00068921375,0.00036199825,0.0003633716,0.00090981723],"category_scores_gemma":[0.00036088494,0.00017705855,0.0003098501,0.00059530576,0.000332293,0.0004086952,0.0012510438,0.00059235445,0.0002901484],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005146353,0.000059032038,0.13292107,0.00038037717,0.00008693001,0.0011041434,0.0014817257,0.00031055012,0.8181748,0.0016164773,0.00026252918,0.043087758],"study_design_scores_gemma":[0.00008104344,0.0008541432,0.86028606,0.0001732358,0.0002521107,0.010949623,0.0016452137,0.0021098384,0.04892988,0.0017680993,0.07287603,0.000074827236],"about_ca_topic_score_codex":0.0006102616,"about_ca_topic_score_gemma":0.0012323386,"teacher_disagreement_score":0.00090981723,"about_ca_system_score_codex":0.00034225592,"about_ca_system_score_gemma":0.0004963195,"threshold_uncertainty_score":0.003043592},"labels":[],"label_agreement":null},{"id":"W4221000278","doi":"10.1186/s12915-022-01283-6","title":"Assignment of unimodal probability distribution models for quantitative morphological phenotyping","year":2022,"lang":"en","type":"article","venue":"BMC Biology","topic":"Cell Image Analysis Techniques","field":"Biochemistry, Genetics and Molecular Biology","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Institute of Genetics; Japan Society for the Promotion of Science; Ministry of Education, Culture, Sports, Science and Technology; Research Organization of Information and Systems","keywords":"Biology; Pattern recognition (psychology); Transformation (genetics); Biological system; Probability distribution; Statistical power; Morphological analysis; Artificial intelligence; Parametric statistics; Pipeline (software); Mixture model; Normal distribution; Feature (linguistics); Probabilistic logic; Computer science; Computational biology; Statistics; Mathematics; Genetics","score_opus":0.04771559025876632,"score_gpt":0.3151228722897869,"score_spread":0.2674072820310206,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4221000278","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.007589492,0.00006045229,0.9911714,0.00005349273,0.000008227397,0.00005684776,0.00016786139,0.00074524636,0.00014685153],"genre_scores_gemma":[0.29702705,0.00035816964,0.69688547,0.00017230255,0.00008355385,0.0008749416,0.002605199,0.00082494895,0.0011683479],"study_design_codex":"simulation_or_modeling","study_design_gemma":"simulation_or_modeling","domain_scores_codex":[0.99725336,0.0012981385,0.00012412472,0.00065600104,0.0005098479,0.00015845163],"domain_scores_gemma":[0.9878685,0.008412595,0.0010227133,0.0011663252,0.0011700166,0.0003599134],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0072140386,0.0021900847,0.0013616249,0.0027488947,0.0008266632,0.0018978819,0.0019662236,0.0013415292,0.0033188488],"category_scores_gemma":[0.020923557,0.0009199437,0.002715462,0.0016394601,0.0013241078,0.0015419524,0.002217376,0.0030469846,0.0013365593],"study_design_candidate":"simulation_or_modeling","study_design_consensus":"simulation_or_modeling","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00050064025,0.00031743734,0.01266951,0.00050173455,0.0004168773,0.00035347202,0.00040110733,0.7486348,0.022148142,0.051385608,0.004768852,0.15790185],"study_design_scores_gemma":[0.0000070504957,0.00002271223,0.0006561239,0.000008978128,0.000012686886,0.00004192708,0.0000100561965,0.9841011,0.0017563718,0.012747073,0.00061464205,0.000021199134],"about_ca_topic_score_codex":0.0039291037,"about_ca_topic_score_gemma":0.0034170044,"teacher_disagreement_score":0.0072140386,"about_ca_system_score_codex":0.0016368718,"about_ca_system_score_gemma":0.0023275597,"threshold_uncertainty_score":0.03815192},"labels":[],"label_agreement":null},{"id":"W4221060004","doi":"10.1186/s12915-022-01271-w","title":"Phylogenomic analysis of Syngnathidae reveals novel relationships, origins of endemic diversity and variable diversification rates","year":2022,"lang":"en","type":"article","venue":"BMC Biology","topic":"Aquatic life and conservation","field":"Agricultural and Biological Sciences","cited_by":50,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Vlaamse regering; King Abdullah University of Science and Technology; Kuwait Institute for Scientific Research; Florida Fish and Wildlife Conservation Commission; National Museum of Nature and Science; Valdosta State University; Yale University; Kagoshima University; National Museum of Natural History; McGill University; Louisiana State University; Florida Museum of Natural History; Universidade de Santiago de Compostela; University of Washington; University of Kansas; Smithsonian Institution","keywords":"Biology; Diversification (marketing strategy); Evolutionary biology; Diversity (politics); Ecology; Zoology; Anthropology","score_opus":0.09771836426948707,"score_gpt":0.24534149674519534,"score_spread":0.14762313247570827,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4221060004","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9978707,0.00029151802,0.0008308651,0.000019318053,0.0000016792164,0.0000034494215,0.00063473283,0.000013021184,0.00033459254],"genre_scores_gemma":[0.99622536,0.00016353982,0.001303865,0.0000252214,0.000003568766,0.00001153375,0.0020177967,0.000012648489,0.0002364159],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9998252,0.00002269607,0.000015070013,0.000086025735,0.00002689689,0.000024142611],"domain_scores_gemma":[0.99959344,0.0001136208,0.00013947357,0.00004385672,0.00006262636,0.00004705525],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002921659,0.00017822253,0.00024065825,0.0014049963,0.00035769658,0.00037584125,0.00016797885,0.0002543644,0.0010265909],"category_scores_gemma":[0.0005875816,0.0001363761,0.00032202608,0.0013934552,0.0003458661,0.0003217232,0.00048283752,0.00028998553,0.0002683142],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00026508738,0.000032294745,0.85092556,0.00019699094,0.00023990778,0.00031639438,0.0012180496,0.0007976585,0.1256534,0.00041351328,0.0002936027,0.019647555],"study_design_scores_gemma":[0.000004041063,0.000026236848,0.99471915,0.000018607621,0.00004689104,0.0003423985,0.0003030045,0.0016669581,0.0014162955,0.00019993291,0.0012496696,0.00000686686],"about_ca_topic_score_codex":0.0006951675,"about_ca_topic_score_gemma":0.0016288334,"teacher_disagreement_score":0.0014049963,"about_ca_system_score_codex":0.00019398626,"about_ca_system_score_gemma":0.0001582881,"threshold_uncertainty_score":0.0034343004},"labels":[],"label_agreement":null},{"id":"W4225759254","doi":"10.1186/s12915-021-01194-y","title":"Ciliary photoreceptors in sea urchin larvae indicate pan-deuterostome cell type conservation","year":2021,"lang":"en","type":"article","venue":"BMC Biology","topic":"Developmental Biology and Gene Regulation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":22,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Victoria","funders":"Eunice Kennedy Shriver National Institute of Child Health and Human Development; Science and Engineering Research Council; National Institute of Child Health and Human Development; Natural Sciences and Engineering Research Council of Canada; California Institute of Technology","keywords":"Biology; Strongylocentrotus purpuratus; Sea urchin; PAX6; Bilateria; Ectoderm; Cilium; Cell biology; Opsin; Deuterostome; Anatomy; Compound eye; Cell type; Echinoderm; Transcription factor; Vertebrate; Genetics; Cell; Gene; Botany; Embryogenesis; Embryo; Retinal; Ecology; Phylogenetics","score_opus":0.012870885594849774,"score_gpt":0.2498725286403021,"score_spread":0.23700164304545232,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4225759254","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9980001,0.00038160992,0.0002811944,0.00001229464,0.0000033696695,0.0000035000144,0.00021853187,0.000017091654,0.0010824238],"genre_scores_gemma":[0.9985147,0.00013915879,0.00031859596,0.00001695186,0.0000015545055,0.000006859683,0.00035808617,0.0000058008213,0.00063819846],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9999244,0.000005711413,0.000008049891,0.000027477914,0.000016680111,0.000017646986],"domain_scores_gemma":[0.9998692,0.000018779978,0.000038589213,0.000016846454,0.000025373158,0.000031174055],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000078678735,0.00009897116,0.00014013147,0.0005081752,0.00020818955,0.0003323057,0.00011655189,0.00017920748,0.0016097993],"category_scores_gemma":[0.00010102286,0.00009269669,0.00013416122,0.00023743212,0.00015719446,0.00013497166,0.00028074122,0.00015236276,0.00025367126],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010543387,0.0000044903018,0.029426012,0.000043012136,0.000019085408,0.00010594369,0.00009369849,0.000021793374,0.9672483,0.00010932984,0.00004571393,0.0027771385],"study_design_scores_gemma":[0.000006098827,0.00007906198,0.9463169,0.000007771827,0.00003725169,0.00078514835,0.00023498481,0.00025047085,0.050303664,0.000060744624,0.0019131262,0.0000047553735],"about_ca_topic_score_codex":0.0014030836,"about_ca_topic_score_gemma":0.003862738,"teacher_disagreement_score":0.0016097993,"about_ca_system_score_codex":0.00019935679,"about_ca_system_score_gemma":0.00011566174,"threshold_uncertainty_score":0.0053853393},"labels":[],"label_agreement":null},{"id":"W4229003035","doi":"10.1186/s12915-022-01291-6","title":"Symbiont transmission in marine sponges: reproduction, development, and metamorphosis","year":2022,"lang":"en","type":"review","venue":"BMC Biology","topic":"Marine Sponges and Natural Products","field":"Biochemistry, Genetics and Molecular Biology","cited_by":63,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"University of North Carolina at Charlotte; Deutsche Forschungsgemeinschaft; GEOMAR Helmholtz-Zentrum für Ozeanforschung Kiel; Canadian Institute for Advanced Research; Ministerio de Ciencia e Innovación; Alexander von Humboldt-Stiftung; Gordon and Betty Moore Foundation","keywords":"Biology; Symbiosis; Sponge; Phylum; Metamorphosis; Lineage (genetic); Microbiome; Evolutionary biology; Ecology; Developmental biology; Zoology; Larva; Paleontology; Bacteria; Genetics; Gene","score_opus":0.051444826602929455,"score_gpt":0.3124501543987466,"score_spread":0.2610053277958172,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4229003035","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00006526819,0.99895835,0.00009302997,0.00017405399,0.00015452142,0.000001761853,0.000015219637,0.000005905525,0.0005319227],"genre_scores_gemma":[0.0004790103,0.99884677,0.00008462134,0.00012694339,0.00012820418,0.0000031518814,0.000024697829,0.0000013501253,0.00030532278],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99981946,0.000028726414,0.000031252337,0.00003945688,0.00006217866,0.000018996654],"domain_scores_gemma":[0.99956685,0.00020380756,0.00006782758,0.000014613185,0.00009265257,0.000054182587],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00053635816,0.00088424946,0.0011558596,0.0020833535,0.0002808237,0.0010180605,0.0008719292,0.0012360717,0.0029924265],"category_scores_gemma":[0.0008810973,0.00032157355,0.0003931348,0.0018475896,0.0006405819,0.0014067234,0.0008433665,0.0015211797,0.002182703],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008150156,0.00003826402,0.00023511735,0.021892015,0.00009091852,0.00020255106,0.00006201015,0.00033151516,0.0020358441,0.004685218,0.024771286,0.9455737],"study_design_scores_gemma":[0.000009197506,0.0000918347,0.001088362,0.003917479,0.00010600586,0.0011437938,0.000050867064,0.00006350403,0.00054501015,0.0018103272,0.9911498,0.000023799614],"about_ca_topic_score_codex":0.001191339,"about_ca_topic_score_gemma":0.001721395,"teacher_disagreement_score":0.0029924265,"about_ca_system_score_codex":0.00065004046,"about_ca_system_score_gemma":0.0010877412,"threshold_uncertainty_score":0.01001066},"labels":[],"label_agreement":null},{"id":"W4237671990","doi":"10.1186/s12915-016-0302-1","title":"Erratum to: On the reversibility of parasitism: adaptation to a free-living lifestyle via gene acquisitions in the diplomonad Trepomonas sp. PC1","year":2016,"lang":"en","type":"erratum","venue":"BMC Biology","topic":"Parasite Biology and Host Interactions","field":"Environmental Science","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canadian Institute for Advanced Research; University of British Columbia; Dalhousie University","funders":"","keywords":"Biology; Adaptation (eye); Parasitism; Gene; Ecology; Genetics; Neuroscience; Host (biology)","score_opus":0.029482679652708163,"score_gpt":0.3198707402911964,"score_spread":0.2903880606384882,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4237671990","genre_codex":"editorial","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00036979074,0.0017455614,0.00031674735,0.03318755,0.9596983,0.000023728157,0.0010347151,0.00015622977,0.003467382],"genre_scores_gemma":[0.019016087,0.027465072,0.005516882,0.114061594,0.4666297,0.00022898121,0.008918434,0.0012287447,0.35693446],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99833494,0.00017605403,0.00042000448,0.00020255543,0.000709736,0.00015675783],"domain_scores_gemma":[0.9901155,0.00269424,0.00094297837,0.00055814633,0.0049924036,0.00069676375],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0017065672,0.0024849747,0.0017951055,0.002250486,0.0027123,0.0020269416,0.0021152927,0.005363596,0.037775174],"category_scores_gemma":[0.017599994,0.0012661857,0.001545434,0.0018023058,0.0018002036,0.002071438,0.0017450294,0.0058885952,0.033151522],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009425477,0.000024032615,0.0001440959,0.00023124783,0.000014428421,0.00040840663,0.000027731023,0.000081251994,0.00020245473,0.0005011532,0.9893656,0.008905363],"study_design_scores_gemma":[0.000057152556,0.00007723866,0.0018279783,0.00044618384,0.00006202194,0.0006757618,0.00009733481,0.00019557928,0.0007997015,0.0011973139,0.99450713,0.00005659455],"about_ca_topic_score_codex":0.009792421,"about_ca_topic_score_gemma":0.0134122195,"teacher_disagreement_score":0.037775174,"about_ca_system_score_codex":0.0023400802,"about_ca_system_score_gemma":0.004221411,"threshold_uncertainty_score":0.12637061},"labels":[],"label_agreement":null},{"id":"W4280567411","doi":"10.1186/s12915-022-01315-1","title":"Polycomb contraction differentially regulates terminal human hematopoietic differentiation programs","year":2022,"lang":"en","type":"article","venue":"BMC Biology","topic":"Acute Myeloid Leukemia Research","field":"Medicine","cited_by":10,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"BC Children's Hospital; Terry Fox Research Institute; University of British Columbia Hospital; Canada's Michael Smith Genome Sciences Centre","funders":"Terry Fox Research Institute; Canadian Institutes of Health Research; Canada's Michael Smith Genome Sciences Centre; Genome Canada","keywords":"Biology; Haematopoiesis; Chromatin; Cell biology; Epigenetics; Progenitor cell; Myeloid; Cellular differentiation; DNA methylation; Stem cell; Transcription factor; Embryonic stem cell; Myelopoiesis; Genetics; Immunology; Gene expression; Gene","score_opus":0.03260153589274777,"score_gpt":0.3178417339323334,"score_spread":0.2852401980395856,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4280567411","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99744165,0.00048433003,0.0008865055,0.0000114521745,0.0000021382862,0.000008821411,0.00012569473,0.000022137257,0.0010172316],"genre_scores_gemma":[0.9980799,0.00020829836,0.0003351106,0.0000081834205,0.00000221783,0.000008720009,0.00038902753,0.0000074978434,0.0009610186],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999608,0.0000048242155,0.0000024373878,0.0000093670615,0.0000111291465,0.000011570329],"domain_scores_gemma":[0.99994946,0.000011173504,0.000011773111,0.0000070427946,0.000008131805,0.000012382423],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000049816757,0.00012295577,0.00007855242,0.00014109389,0.00008184866,0.00015918443,0.00007800719,0.000056229295,0.00090784073],"category_scores_gemma":[0.000100594596,0.000058822083,0.00008122198,0.000096072356,0.00012030752,0.000053185377,0.00016816442,0.000118038115,0.0001965127],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010991712,0.0000061195738,0.0016336491,0.000012493625,0.00000340156,0.000037974678,0.00002356094,0.000056436,0.9959986,0.0000854709,0.000027410837,0.0020049463],"study_design_scores_gemma":[0.000012477133,0.00021034692,0.09273767,0.000005724751,0.000019706413,0.0004389855,0.0000493587,0.0010476573,0.90272516,0.000109792956,0.002638637,0.00000438439],"about_ca_topic_score_codex":0.0005461148,"about_ca_topic_score_gemma":0.00084780005,"teacher_disagreement_score":0.00090784073,"about_ca_system_score_codex":0.00012503777,"about_ca_system_score_gemma":0.00010511507,"threshold_uncertainty_score":0.0030370355},"labels":[],"label_agreement":null},{"id":"W4280584102","doi":"10.1186/s12915-022-01312-4","title":"Cdk5-mediated JIP1 phosphorylation regulates axonal outgrowth through Notch1 inhibition","year":2022,"lang":"en","type":"article","venue":"BMC Biology","topic":"Cancer-related Molecular Pathways","field":"Medicine","cited_by":9,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Ottawa; University of Calgary","funders":"Canadian Institutes of Health Research; Krembil Foundation; Heart and Stroke Foundation of Canada","keywords":"Cyclin-dependent kinase 5; Biology; Phosphorylation; Cell biology; Neurite; Neuroscience; Protein kinase A; Cyclin-dependent kinase 2; Genetics","score_opus":0.024004416626891133,"score_gpt":0.2625143420772291,"score_spread":0.238509925450338,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4280584102","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9950362,0.0014038268,0.0012703894,0.00004379739,0.000011866037,0.000012051728,0.00039132393,0.000048975588,0.0017815692],"genre_scores_gemma":[0.99700445,0.00042606608,0.00083844754,0.00001559092,0.0000025239424,0.000007705379,0.00030169552,0.000007819544,0.0013956858],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999255,0.0000070285223,0.00000681029,0.000017671877,0.000017619424,0.000025331932],"domain_scores_gemma":[0.99994576,0.0000069254925,0.000016267251,0.0000051373304,0.000005253103,0.000020663992],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00007475279,0.0002973639,0.00011268568,0.00019356646,0.00017854245,0.00025532854,0.00020442874,0.00009596395,0.0016886587],"category_scores_gemma":[0.00006746301,0.00009343906,0.0001986439,0.00010573302,0.00013625418,0.00012445786,0.00018920655,0.00026165316,0.00029429703],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000112588394,0.000018776493,0.00056715944,0.00004246273,0.0000058588025,0.000052322575,0.000005268406,0.00011289461,0.9980519,0.00011872927,0.000041207502,0.000870906],"study_design_scores_gemma":[0.000008769707,0.000068820475,0.00943117,0.000005017754,0.000010972227,0.0001312622,0.000014735571,0.0012514525,0.9878351,0.0000484914,0.0011915177,0.0000027606427],"about_ca_topic_score_codex":0.0013731165,"about_ca_topic_score_gemma":0.0027012571,"teacher_disagreement_score":0.0016886587,"about_ca_system_score_codex":0.0005860564,"about_ca_system_score_gemma":0.00022033413,"threshold_uncertainty_score":0.0056491494},"labels":[],"label_agreement":null},{"id":"W4281620392","doi":"10.1186/s12915-022-01322-2","title":"Enhancer-promoter interaction maps provide insights into skeletal muscle-related traits in pig genome","year":2022,"lang":"en","type":"article","venue":"BMC Biology","topic":"Genetic Mapping and Diversity in Plants and Animals","field":"Biochemistry, Genetics and Molecular Biology","cited_by":57,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ministry of Agriculture","funders":"National Outstanding Youth Foundation of China; National Natural Science Foundation of China; National Youth Science Foundation","keywords":"Biology; Chromatin; ChIA-PET; Genome-wide association study; Genetics; Gene; CTCF; Enhancer; Computational biology; Chromosome conformation capture; Genome; Phenotype; Regulation of gene expression; Chromatin remodeling; Gene expression; Single-nucleotide polymorphism","score_opus":0.013013549512783162,"score_gpt":0.23567274987568693,"score_spread":0.22265920036290376,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4281620392","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9033785,0.0033412524,0.057941902,0.00020652285,0.000041843934,0.000058339396,0.027303526,0.0014232731,0.006304841],"genre_scores_gemma":[0.941217,0.0006617827,0.034525022,0.00022363012,0.000046818637,0.00009163577,0.020813005,0.00026768164,0.0021533666],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99981755,0.000017672346,0.000008064213,0.00009997411,0.000029211558,0.000027534863],"domain_scores_gemma":[0.9995881,0.00019292271,0.0000983645,0.000039755476,0.000040073548,0.000040863302],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002528968,0.00034914073,0.00037841251,0.00167288,0.00023890771,0.0003467228,0.00026430815,0.00031893075,0.0049054543],"category_scores_gemma":[0.0005015884,0.00024471624,0.00074785226,0.0012950061,0.00017012737,0.00021303355,0.0005310559,0.00047461648,0.00090766343],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006975812,0.0001250962,0.16303186,0.0009955374,0.0006403206,0.00064061314,0.00032991444,0.0060153496,0.7698705,0.0025287208,0.0019138039,0.053210597],"study_design_scores_gemma":[0.00006612652,0.00020084332,0.9054274,0.000075167205,0.0006673748,0.0009728877,0.00016311108,0.026432844,0.04216047,0.005250401,0.018539984,0.00004355662],"about_ca_topic_score_codex":0.0013712674,"about_ca_topic_score_gemma":0.003382071,"teacher_disagreement_score":0.0049054543,"about_ca_system_score_codex":0.00019779532,"about_ca_system_score_gemma":0.00025285844,"threshold_uncertainty_score":0.01641041},"labels":[],"label_agreement":null},{"id":"W4283692674","doi":"10.1186/s12915-022-01341-z","title":"Transcriptomic evidence for visual adaptation during the aquatic to terrestrial metamorphosis in leopard frogs","year":2022,"lang":"en","type":"article","venue":"BMC Biology","topic":"Amphibian and Reptile Biology","field":"Environmental Science","cited_by":25,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"York University","funders":"Natural Environment Research Council; Sight Research UK; Smithsonian Institution; National Science Foundation","keywords":"Biology; Metamorphosis; Adaptation (eye); Juvenile; Transcriptome; Evolutionary biology; Ecology; Sensory system; Gene expression; Gene; Zoology; Genetics; Neuroscience; Larva","score_opus":0.07054643992920778,"score_gpt":0.3097835404431488,"score_spread":0.23923710051394104,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4283692674","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.993178,0.001320928,0.0010637044,0.000050719595,0.000009933678,0.000013884437,0.003490867,0.000040814466,0.000831199],"genre_scores_gemma":[0.9901821,0.00066322775,0.0018909933,0.00014109754,0.000018179702,0.00007685004,0.0051227254,0.000032809618,0.0018719335],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99984074,0.000010952615,0.000008461289,0.00008072037,0.000026693311,0.00003239701],"domain_scores_gemma":[0.99975044,0.00004386641,0.000103963524,0.000015167375,0.000046381985,0.00004018366],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012089045,0.0002036651,0.00027013614,0.0006144708,0.00035257405,0.0003865919,0.00014416566,0.00028909303,0.0014107628],"category_scores_gemma":[0.00019155291,0.00017365869,0.0003252395,0.00048942934,0.00032191494,0.00024297184,0.0003303492,0.00033630067,0.00035509907],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00017324385,0.000023272269,0.03599891,0.00017018002,0.000039371494,0.00014833701,0.00021293572,0.0000974823,0.95993876,0.00011128306,0.0001271147,0.0029590942],"study_design_scores_gemma":[0.0000056335343,0.0001550993,0.98196226,0.000028196215,0.00004514198,0.00033409384,0.00033382076,0.00035293453,0.014914531,0.00009130922,0.001766322,0.000010693537],"about_ca_topic_score_codex":0.0008472593,"about_ca_topic_score_gemma":0.0015154631,"teacher_disagreement_score":0.0014107628,"about_ca_system_score_codex":0.00016232186,"about_ca_system_score_gemma":0.00015723312,"threshold_uncertainty_score":0.004719436},"labels":[],"label_agreement":null},{"id":"W4284691712","doi":"10.1186/s12915-022-01361-9","title":"Comparative genomic analysis of Babesia duncani responsible for human babesiosis","year":2022,"lang":"en","type":"article","venue":"BMC Biology","topic":"Vector-borne infectious diseases","field":"Immunology and Microbiology","cited_by":27,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"Agricultural Science and Technology Innovation Program; Chinese Academy of Agricultural Sciences; Zhejiang University; State Key Laboratory of Veterinary Etiological Biology; Universidade de Macau; National Natural Science Foundation of China","keywords":"Biology; Babesia; Babesiosis; Clade; Phylogenetic tree; Genome; Tick; Theileria; Parasite hosting; Genetics; Virology; Gene; Parasitology; Whole genome sequencing; Zoology","score_opus":0.04311190360150002,"score_gpt":0.3161181614480373,"score_spread":0.27300625784653726,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4284691712","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.991217,0.0013596887,0.0021260255,0.00006656391,0.000016975471,0.000024082525,0.0038106183,0.000036999914,0.0013420491],"genre_scores_gemma":[0.9774096,0.00095780875,0.0052445615,0.00010020127,0.000018150811,0.000035695302,0.015239064,0.000025793817,0.0009690215],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998915,0.000009933328,0.0000065682466,0.000043334887,0.000024542516,0.000024043895],"domain_scores_gemma":[0.999861,0.000026820751,0.000039511913,0.0000110972915,0.00003248569,0.000029051691],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000090842324,0.00019739156,0.00019945185,0.0006458705,0.00022247383,0.0002451845,0.00013294314,0.00020671674,0.0013323405],"category_scores_gemma":[0.00023269503,0.000106099345,0.00030479342,0.0007278364,0.00013363239,0.000101599406,0.00019793682,0.0002652518,0.00034865094],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0004923467,0.000042862906,0.020472635,0.00020172792,0.00004734349,0.0003322032,0.00019097922,0.00019553202,0.96703124,0.00012644364,0.00023890805,0.010627765],"study_design_scores_gemma":[0.000027982414,0.0005553641,0.8413782,0.00006875319,0.00023894341,0.003370084,0.0006028414,0.002362681,0.13466556,0.0002882191,0.016420744,0.000020628178],"about_ca_topic_score_codex":0.0012853912,"about_ca_topic_score_gemma":0.0013169722,"teacher_disagreement_score":0.0013323405,"about_ca_system_score_codex":0.00021684075,"about_ca_system_score_gemma":0.00016093696,"threshold_uncertainty_score":0.004457116},"labels":[],"label_agreement":null},{"id":"W4294101201","doi":"10.1186/s12915-022-01395-z","title":"Multidimensional associations between nutrient intake and healthy ageing in humans","year":2022,"lang":"en","type":"article","venue":"BMC Biology","topic":"Nutritional Studies and Diet","field":"Medicine","cited_by":30,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Centre Hospitalier Universitaire de Sherbrooke; Université de Montréal; Centre Intégré Universitaire de Santé et de Services Sociaux du Saguenay–Lac-Saint-Jean; Centre Hospitalier de l’Université de Montréal; Institut Universitaire de Gériatrie de Montréal; Centre Intégré Universitaire de Santé et de Services Sociaux du Centre-Sud-de-l'Île-de-Montréal; Université de Sherbrooke","funders":"Fonds de Recherche du Québec - Santé; Australian Research Council; Canadian Institutes of Health Research; Réseau québécois de recherche sur le vieillissement; Université de Sherbrooke","keywords":"Ageing; Micronutrient; Nutrient; Biology; Physiology; Vitamin D and neurology; Ecology; Endocrinology; Medicine; Pathology","score_opus":0.05678272742978162,"score_gpt":0.3340333240607908,"score_spread":0.27725059663100915,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4294101201","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9603785,0.0025383527,0.03148726,0.00048519063,0.000032940174,0.000066947774,0.0028437993,0.0001370936,0.0020298448],"genre_scores_gemma":[0.9908386,0.00040564092,0.0078109736,0.000048231155,0.000014297418,0.00003582137,0.00069729844,0.000011170098,0.00013803055],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9990138,0.00044792413,0.00008825315,0.00031703684,0.000091041155,0.000042004343],"domain_scores_gemma":[0.9973767,0.00088003266,0.0010633934,0.0004553374,0.00014065034,0.00008385498],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0019312449,0.0004994686,0.00048166208,0.00080969924,0.00024523056,0.00087882334,0.0004185337,0.0005120026,0.0025090983],"category_scores_gemma":[0.0039985175,0.00020971906,0.00084419147,0.0012993749,0.00088991754,0.0004965646,0.0009960751,0.0003775265,0.00027453134],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0004846486,0.00006993627,0.95270485,0.00034512955,0.0013130853,0.0001270729,0.00048124194,0.010981995,0.0044119847,0.0035082859,0.0005274299,0.025044408],"study_design_scores_gemma":[0.000010964075,0.0002001803,0.9744387,0.00003812926,0.00013988571,0.00032253203,0.00014906938,0.0106845535,0.00047081397,0.011834863,0.0016754905,0.000034755547],"about_ca_topic_score_codex":0.002003463,"about_ca_topic_score_gemma":0.0016511055,"teacher_disagreement_score":0.0025090983,"about_ca_system_score_codex":0.00033722082,"about_ca_system_score_gemma":0.000251436,"threshold_uncertainty_score":0.010213554},"labels":[],"label_agreement":null},{"id":"W4296472985","doi":"10.1186/s12915-022-01402-3","title":"Combined nanometric and phylogenetic analysis of unique endocytic compartments in Giardia lamblia sheds light on the evolution of endocytosis in Metamonada","year":2022,"lang":"en","type":"article","venue":"BMC Biology","topic":"Parasitic Infections and Diagnostics","field":"Immunology and Microbiology","cited_by":16,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"Universität Zürich; Schweizerischer Nationalfonds zur Förderung der Wissenschaftlichen Forschung","keywords":"Biology; Endocytic cycle; Giardia lamblia; Endocytosis; Giardia; Phylogenetic tree; Protozoa; Cell biology; Evolutionary biology; Microbiology; Genetics; Gene","score_opus":0.016559958467063724,"score_gpt":0.2524210928158423,"score_spread":0.23586113434877856,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4296472985","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9940209,0.0008035344,0.0039611952,0.00003143054,0.0000044357334,0.000011551848,0.00038075336,0.000056641158,0.0007295484],"genre_scores_gemma":[0.9915291,0.00022061393,0.007390237,0.000026130918,0.0000046374735,0.000019198307,0.00051094545,0.000021541371,0.00027764073],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99983287,0.000014318356,0.00001475921,0.00007963003,0.000032900276,0.00002546469],"domain_scores_gemma":[0.9995851,0.000081314356,0.00015593867,0.000058232363,0.00007325034,0.00004612766],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00025133794,0.00021457509,0.00023404922,0.0016609748,0.00036918712,0.00046691217,0.0002637762,0.00054841104,0.00062499125],"category_scores_gemma":[0.00047267257,0.00013778583,0.0002813393,0.0005965482,0.0003827992,0.00034198066,0.00060980284,0.00032306326,0.00032583257],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008704051,0.000012871872,0.046883233,0.00010018379,0.000025503618,0.00009116933,0.00022648317,0.00021352655,0.9445818,0.00016684792,0.000038423914,0.0075729354],"study_design_scores_gemma":[0.0000047245944,0.00013910471,0.94467133,0.000033038756,0.00006964512,0.001433894,0.00035446204,0.0037871774,0.045516524,0.0003198062,0.003649622,0.000020610101],"about_ca_topic_score_codex":0.0009913911,"about_ca_topic_score_gemma":0.0017371981,"teacher_disagreement_score":0.0016609748,"about_ca_system_score_codex":0.00033245812,"about_ca_system_score_gemma":0.00016126817,"threshold_uncertainty_score":0.0024122},"labels":[],"label_agreement":null},{"id":"W4296785112","doi":"10.1186/s12915-022-01394-0","title":"A stem group Codium alga from the latest Ediacaran of South China provides taxonomic insight into the early diversification of the plant kingdom","year":2022,"lang":"en","type":"article","venue":"BMC Biology","topic":"Plant Diversity and Evolution","field":"Agricultural and Biological Sciences","cited_by":12,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Royal Ontario Museum; University of Toronto","funders":"National Key Research and Development Program of China; Key Technologies Research and Development Program; National Natural Science Foundation of China","keywords":"Biology; Diversification (marketing strategy); China; Ecology; Group (periodic table); Botany; Archaeology","score_opus":0.04271212488572174,"score_gpt":0.17562405377136409,"score_spread":0.13291192888564235,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4296785112","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9974275,0.00044365312,0.00076830277,0.00003949955,0.000007674906,0.0000058305473,0.00024560132,0.000023352348,0.0010385533],"genre_scores_gemma":[0.99742186,0.00019666852,0.0013301658,0.000030027477,0.000009264742,0.000005263142,0.0003942147,0.000009159259,0.0006033052],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99993765,0.0000025075906,0.000006273866,0.000029314144,0.000013789224,0.000010347763],"domain_scores_gemma":[0.99988246,0.000012617289,0.000034979206,0.000018470895,0.00002773434,0.000023746636],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012105955,0.0003373054,0.00018957908,0.0009522508,0.00092373096,0.00037329423,0.00021796569,0.00031943832,0.0013269831],"category_scores_gemma":[0.00012811467,0.0001230949,0.00020845354,0.00092286133,0.00056362484,0.00038149007,0.0007870466,0.00025297253,0.00022789442],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00029594594,0.000025508862,0.42490083,0.00040851042,0.00009404124,0.001586766,0.0033120045,0.00031021854,0.51610774,0.0006654874,0.00036394995,0.05192894],"study_design_scores_gemma":[0.000009387511,0.00007951422,0.97490454,0.000030927768,0.00008214349,0.0021204075,0.001184179,0.00058257434,0.013677319,0.00023159728,0.0070784846,0.000018991674],"about_ca_topic_score_codex":0.0045741354,"about_ca_topic_score_gemma":0.009855122,"teacher_disagreement_score":0.0045741354,"about_ca_system_score_codex":0.0003058454,"about_ca_system_score_gemma":0.0003464443,"threshold_uncertainty_score":0.009095073},"labels":[],"label_agreement":null},{"id":"W4302024634","doi":"10.1186/s12915-022-01428-7","title":"Attention to visual motion suppresses neuronal and behavioral sensitivity in nearby feature space","year":2022,"lang":"en","type":"article","venue":"BMC Biology","topic":"Visual perception and processing mechanisms","field":"Neuroscience","cited_by":18,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph; Western University; York University","funders":"Natural Sciences and Engineering Research Council of Canada; Deutsches Primatenzentrum; Western University; Government of Ontario; Canada Research Chairs; Deutsche Forschungsgemeinschaft; Air Force Office of Scientific Research; Canadian Institutes of Health Research; Canadian Network for Research and Innovation in Machining Technology, Natural Sciences and Engineering Research Council of Canada","keywords":"Feature (linguistics); Receptive field; Neuroscience; Stimulus (psychology); Neurophysiology; Motion perception; Artificial intelligence; Pattern recognition (psychology); Biology; Computer science; Psychology; Perception; Cognitive psychology","score_opus":0.06751629526454295,"score_gpt":0.3626657957422071,"score_spread":0.29514950047766414,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4302024634","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9956252,0.00020422509,0.0031481716,0.00004024684,0.000011279666,0.0000080950795,0.000019653653,0.00004609999,0.0008971425],"genre_scores_gemma":[0.99881834,0.00008667147,0.0006636798,0.00003736445,0.000010502225,0.000008386314,0.00002429694,0.000012869474,0.0003379298],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99989617,0.000009807549,0.000006496034,0.00002856699,0.000029144956,0.000029839353],"domain_scores_gemma":[0.99960107,0.00017779224,0.00007264231,0.000039362356,0.000037511458,0.00007159198],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014910425,0.00018337078,0.00020161245,0.00016504845,0.00010125779,0.00022079448,0.00023056564,0.00027493603,0.0013326628],"category_scores_gemma":[0.0011552448,0.00012246713,0.00018064083,0.00009995642,0.00028035903,0.00017806982,0.00044970406,0.00025968163,0.00013706523],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010157412,0.000011713558,0.0006583118,0.000019362758,0.000006539267,0.000019788216,0.00001872923,0.0001487025,0.9957457,0.000058960424,0.000016281163,0.0031943098],"study_design_scores_gemma":[0.00005390107,0.00094313454,0.30297613,0.000028760895,0.000083271145,0.0005693438,0.0000924282,0.020580783,0.67232126,0.0011529372,0.0011776192,0.000020452451],"about_ca_topic_score_codex":0.0007539859,"about_ca_topic_score_gemma":0.0008823524,"teacher_disagreement_score":0.0013326628,"about_ca_system_score_codex":0.00035579357,"about_ca_system_score_gemma":0.00019360079,"threshold_uncertainty_score":0.0044582486},"labels":[],"label_agreement":null},{"id":"W4303684674","doi":"10.1186/s12915-022-01429-6","title":"Gene loss, pseudogenization, and independent genome reduction in non-photosynthetic species of Cryptomonas (Cryptophyceae) revealed by comparative nucleomorph genomics","year":2022,"lang":"en","type":"article","venue":"BMC Biology","topic":"Protist diversity and phylogeny","field":"Biochemistry, Genetics and Molecular Biology","cited_by":9,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University","funders":"Natural Sciences and Engineering Research Council of Canada; National Research Foundation of Korea; Japan Society for the Promotion of Science; National Research Foundation","keywords":"Biology; Genome; Gene; Genetics; Genomics; Comparative genomics; Evolutionary biology; Botany","score_opus":0.014373646218864904,"score_gpt":0.22534090404675486,"score_spread":0.21096725782788994,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4303684674","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99822277,0.00019082533,0.00062588765,0.000022854652,0.0000029635928,0.000008074171,0.0005897011,0.000017945238,0.0003190351],"genre_scores_gemma":[0.99582314,0.00017354926,0.0014756056,0.00003234808,0.0000034177967,0.000020089135,0.0019550098,0.000025374951,0.0004914948],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.999894,0.000008082107,0.0000070189903,0.000046763627,0.000025717898,0.00001838354],"domain_scores_gemma":[0.9997688,0.000044469427,0.00009215791,0.00003328104,0.000022397597,0.000038973212],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009955794,0.0002832653,0.0001964758,0.0005437583,0.00025521536,0.00029810052,0.00024659326,0.00029064508,0.0007197223],"category_scores_gemma":[0.00022555201,0.000109080764,0.00031445175,0.0004954903,0.00032215382,0.00018123379,0.00037126103,0.00038214834,0.0001648814],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00023332171,0.000020881589,0.008294594,0.000058685244,0.000014148323,0.00011337257,0.0000717365,0.00007872404,0.9884328,0.00008149014,0.000017798924,0.0025824206],"study_design_scores_gemma":[0.00003308958,0.0003518642,0.74981993,0.00002505223,0.000098991215,0.0019971335,0.0004489802,0.0014984373,0.24190077,0.0003801455,0.0034164123,0.00002916872],"about_ca_topic_score_codex":0.00090039737,"about_ca_topic_score_gemma":0.0012860959,"teacher_disagreement_score":0.00090039737,"about_ca_system_score_codex":0.0003433961,"about_ca_system_score_gemma":0.00022172272,"threshold_uncertainty_score":0.0024915338},"labels":[],"label_agreement":null},{"id":"W4304124105","doi":"10.1186/s12915-022-01425-w","title":"Pheromone sensing in Drosophila requires support cell-expressed Osiris 8","year":2022,"lang":"en","type":"article","venue":"BMC Biology","topic":"Neurobiology and Insect Physiology Research","field":"Neuroscience","cited_by":19,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Institute of Genetics; National Institute of Allergy and Infectious Diseases; FP7 Ideas: European Research Council; National Institute on Deafness and Other Communication Disorders; National Science Foundation; National Institutes of Health; European Research Council; Université de Lausanne; Schweizerischer Nationalfonds zur Förderung der Wissenschaftlichen Forschung","keywords":"Biology; Drosophila melanogaster; Gene; Transcriptome; Ionotropic effect; Pheromone; Sensory system; Cell biology; Receptor; Genetics; Gene expression; Neuroscience; Glutamate receptor","score_opus":0.0628819526359596,"score_gpt":0.31522231820856195,"score_spread":0.25234036557260237,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4304124105","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9933589,0.0008738469,0.0023580494,0.000030300844,0.000011975287,0.00002298228,0.0021533768,0.00009959606,0.0010910365],"genre_scores_gemma":[0.98356664,0.0008430032,0.005630424,0.000070180395,0.000007602525,0.000048459326,0.0073856045,0.000042206757,0.0024057473],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99995863,0.0000018942245,0.0000030458277,0.000015998921,0.000012764749,0.000007671755],"domain_scores_gemma":[0.9999486,0.000005128006,0.000024118528,0.00000503311,0.0000055810046,0.000011586795],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00004153118,0.00029947638,0.00011688545,0.00019596447,0.00012335916,0.0002071751,0.00012846454,0.00013021285,0.00059761293],"category_scores_gemma":[0.00006037718,0.00010246074,0.00020366957,0.00014241433,0.0001147634,0.00015644441,0.00019324155,0.0002194479,0.00041860528],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00005165643,0.000004687625,0.0013825363,0.00003739855,0.0000033183796,0.000044316173,0.000011084244,0.00004489132,0.99699533,0.00006276538,0.000044700482,0.001317293],"study_design_scores_gemma":[0.00002835467,0.0002894472,0.16868256,0.000030311787,0.000077938654,0.0007937546,0.00019171783,0.0030442195,0.81641495,0.00024446388,0.010187482,0.000014853207],"about_ca_topic_score_codex":0.00032174407,"about_ca_topic_score_gemma":0.00071636855,"teacher_disagreement_score":0.00059761293,"about_ca_system_score_codex":0.00020398636,"about_ca_system_score_gemma":0.00011565027,"threshold_uncertainty_score":0.001999259},"labels":[],"label_agreement":null},{"id":"W4307379589","doi":"10.1186/s12915-022-01433-w","title":"The pangenome of the wheat pathogen Pyrenophora tritici-repentis reveals novel transposons associated with necrotrophic effectors ToxA and ToxB","year":2022,"lang":"en","type":"article","venue":"BMC Biology","topic":"Wheat and Barley Genetics and Pathology","field":"Agricultural and Biological Sciences","cited_by":67,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba; University of Alberta; Agriculture and Agri-Food Canada","funders":"Saskatchewan Wheat Development Commission; Alberta Wheat Commission; Agriculture and Agri-Food Canada; University of Carthage","keywords":"Biology; Effector; Genome; Genetics; Transposable element; Gene; Horizontal gene transfer; Comparative genomics; Genome evolution; Pyrenophora; Genomics; Cell biology","score_opus":0.018281082291367802,"score_gpt":0.19953972723308147,"score_spread":0.18125864494171368,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4307379589","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.993836,0.00067737885,0.0017113202,0.00003762191,0.000005796431,0.00002619756,0.0030714208,0.00005466579,0.00057962496],"genre_scores_gemma":[0.98309857,0.00056064135,0.0031823255,0.000060833394,0.0000100200405,0.000031149604,0.012097853,0.00003182028,0.00092686847],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99989605,0.000005769295,0.000007434972,0.00005198633,0.000021056965,0.00001764416],"domain_scores_gemma":[0.999835,0.000029144341,0.000063060594,0.00001617545,0.00002478558,0.00003181955],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00010448509,0.00031412038,0.00022529063,0.0005938859,0.00019990763,0.00032770267,0.00014006588,0.00028842766,0.0007007929],"category_scores_gemma":[0.00018593976,0.00013553693,0.00032050232,0.00062852306,0.00015571606,0.00028307823,0.00031961835,0.00030674625,0.00019419685],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001856907,0.000025783735,0.0081196455,0.00013724684,0.000026025516,0.00015315575,0.0001657878,0.000102802835,0.9853359,0.000047634225,0.000058257516,0.005641894],"study_design_scores_gemma":[0.00003350887,0.00086814945,0.8011904,0.00004946998,0.00029767287,0.003707651,0.00068155053,0.002071225,0.1825099,0.00026580945,0.0082973065,0.00002740572],"about_ca_topic_score_codex":0.0008712698,"about_ca_topic_score_gemma":0.0013583481,"teacher_disagreement_score":0.0008712698,"about_ca_system_score_codex":0.0001869529,"about_ca_system_score_gemma":0.00018473154,"threshold_uncertainty_score":0.0023444295},"labels":[],"label_agreement":null},{"id":"W4311585683","doi":"10.1186/s12915-022-01473-2","title":"Chromatin accessibility illuminates single-cell regulatory dynamics of rice root tips","year":2022,"lang":"en","type":"article","venue":"BMC Biology","topic":"Plant Molecular Biology Research","field":"Agricultural and Biological Sciences","cited_by":42,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Biotechnology Research Institute","funders":"Central Public-interest Scientific Institution Basal Research Fund, Chinese Academy of Fishery Sciences; Agricultural Science and Technology Innovation Program; Chinese Academy of Agricultural Sciences; National Natural Science Foundation of China","keywords":"Chromatin; Biology; Transcriptome; Transcription factor; Cell biology; Cell type; Gene regulatory network; Regulation of gene expression; Gene expression; Gene; Computational biology; Cell; Genetics","score_opus":0.028782362158176256,"score_gpt":0.25059998831343333,"score_spread":0.22181762615525707,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4311585683","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98222005,0.0004746379,0.013141286,0.000041848896,0.000011618359,0.000010571355,0.0026015951,0.0003145484,0.0011838527],"genre_scores_gemma":[0.98800313,0.0002640689,0.0077271257,0.00006218071,0.000008566372,0.000027485974,0.00232047,0.00014609481,0.0014408085],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9999279,0.000002622684,0.000002594884,0.000036998703,0.000015231648,0.000014586198],"domain_scores_gemma":[0.99987817,0.00003079942,0.000020217893,0.000021557495,0.000028439887,0.000020746313],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00010482279,0.00014297859,0.00022215757,0.00021043817,0.00016432845,0.00027647614,0.00021930148,0.00020166319,0.0015955027],"category_scores_gemma":[0.00015386741,0.00015787131,0.0002109082,0.00019607849,0.00024150459,0.00014463105,0.00028389148,0.00031626408,0.0004701306],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00003820764,0.0000033820259,0.0017505166,0.000032977965,0.000006675033,0.000017830653,0.00004181563,0.00027300263,0.99592173,0.00006056028,0.00006136274,0.0017918905],"study_design_scores_gemma":[0.000012911596,0.000101165686,0.30104217,0.000011189454,0.000048268215,0.00032463108,0.00018572008,0.0130697675,0.68086505,0.0005123052,0.003799353,0.000027457794],"about_ca_topic_score_codex":0.0020316937,"about_ca_topic_score_gemma":0.0044155517,"teacher_disagreement_score":0.0020316937,"about_ca_system_score_codex":0.0002845882,"about_ca_system_score_gemma":0.00015434543,"threshold_uncertainty_score":0.0053374767},"labels":[],"label_agreement":null},{"id":"W4313250085","doi":"10.1186/s12915-022-01489-8","title":"Ancestral reconstruction reveals catalytic inactivation of activation-induced cytidine deaminase concomitant with cold water adaption in the Gadiformes bony fish","year":2022,"lang":"en","type":"article","venue":"BMC Biology","topic":"Reproductive biology and impacts on aquatic species","field":"Biochemistry, Genetics and Molecular Biology","cited_by":41,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Simon Fraser University; Memorial University of Newfoundland","funders":"Faculty of Medicine, Memorial University of Newfoundland; Natural Sciences and Engineering Research Council of Canada; Memorial University of Newfoundland; Canadian Institutes of Health Research; Norges Forskningsråd; Universitetet i Oslo","keywords":"Biology; Activation-induced (cytidine) deaminase; Cytidine deaminase; Genetics; Gene; Neofunctionalization; Gene family; Genome; Evolutionary biology; Antibody; Somatic hypermutation; B cell","score_opus":0.02802334765446946,"score_gpt":0.2574047399675961,"score_spread":0.22938139231312665,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4313250085","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9982986,0.00018591958,0.00077158964,0.000020087284,0.000003446355,0.0000035850917,0.0002190409,0.000011865938,0.00048585344],"genre_scores_gemma":[0.99772376,0.00011496394,0.0009498475,0.000033958786,0.0000030603096,0.000007537575,0.000496442,0.000008790452,0.0006616387],"study_design_codex":"bench_or_experimental","study_design_gemma":"simulation_or_modeling","domain_scores_codex":[0.99993634,0.000002684113,0.0000035890491,0.00002884626,0.000012916727,0.000015732096],"domain_scores_gemma":[0.999869,0.000017470555,0.000046893754,0.000017471986,0.00002376487,0.000025484898],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009844331,0.00018879044,0.00018214955,0.00034290028,0.00020560769,0.00027759868,0.00015526458,0.00024800535,0.000510345],"category_scores_gemma":[0.00018134098,0.00013802804,0.00024638456,0.00024697444,0.0004016129,0.00014865282,0.00032772488,0.0003316398,0.00016227496],"study_design_candidate":"simulation_or_modeling","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00017574096,0.00000759504,0.032116838,0.000058757716,0.000018347257,0.00028026072,0.00021856868,0.00014910789,0.96270764,0.00021679724,0.000031620177,0.0040187268],"study_design_scores_gemma":[0.000015081946,0.0002103814,0.9030419,0.00001751431,0.00008773623,0.0012260582,0.0005182264,0.0012388508,0.089301296,0.0003513753,0.003967159,0.00002444992],"about_ca_topic_score_codex":0.0017977048,"about_ca_topic_score_gemma":0.003149793,"teacher_disagreement_score":0.0017977048,"about_ca_system_score_codex":0.00026051112,"about_ca_system_score_gemma":0.00021272503,"threshold_uncertainty_score":0.003574431},"labels":[],"label_agreement":null},{"id":"W4318763810","doi":"10.1186/s12915-023-01515-3","title":"Allele-specific quantitation of ATXN3 and HTT transcripts in polyQ disease models","year":2023,"lang":"en","type":"article","venue":"BMC Biology","topic":"Genetic Neurodegenerative Diseases","field":"Neuroscience","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"BC Children's Hospital; University of British Columbia","funders":"Narodowe Centrum Badań i Rozwoju; Narodowym Centrum Nauki; Narodowe Centrum Nauki; E-Rare; National Ataxia Foundation","keywords":"Biology; Allele; Genetics; Disease; Gene; Computational biology; Evolutionary biology","score_opus":0.16815751237742635,"score_gpt":0.31974442407746173,"score_spread":0.15158691170003538,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4318763810","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8086935,0.0027930057,0.17522058,0.00027340776,0.0002876388,0.00065714493,0.006725225,0.001197344,0.0041520065],"genre_scores_gemma":[0.84178925,0.002267149,0.13831349,0.000354337,0.00008227456,0.0019475067,0.00697124,0.0005320666,0.0077427356],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99919623,0.00010061708,0.00007491316,0.00029113848,0.0002590981,0.00007799072],"domain_scores_gemma":[0.9993362,0.00013074744,0.00022874569,0.00009201565,0.00013676679,0.00007557929],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00068144023,0.00055284135,0.00034164794,0.0007879388,0.00036104958,0.00039899888,0.0004412334,0.0007082661,0.0017153478],"category_scores_gemma":[0.00037065224,0.00025405997,0.00042026382,0.00049036776,0.00057515746,0.0002228581,0.0003367388,0.0011090602,0.00062354637],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000050012888,0.00002916091,0.00017302472,0.00003343232,0.0000061349074,0.000029625948,0.000031322943,0.00008251804,0.99873334,0.000111480294,0.00003872481,0.00068110484],"study_design_scores_gemma":[0.000017455797,0.0003450718,0.0034995228,0.000015175958,0.000034837736,0.00022794493,0.000038150167,0.0016890026,0.99188155,0.00017197228,0.002063865,0.00001535044],"about_ca_topic_score_codex":0.00047228415,"about_ca_topic_score_gemma":0.0012619657,"teacher_disagreement_score":0.0017153478,"about_ca_system_score_codex":0.00044344433,"about_ca_system_score_gemma":0.0002082809,"threshold_uncertainty_score":0.005738437},"labels":[],"label_agreement":null},{"id":"W4318763903","doi":"10.1186/s12915-023-01519-z","title":"Integrative single-cell RNA-seq and ATAC-seq analysis of myogenic differentiation in pig","year":2023,"lang":"en","type":"article","venue":"BMC Biology","topic":"Muscle Physiology and Disorders","field":"Biochemistry, Genetics and Molecular Biology","cited_by":49,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"Basic and Applied Basic Research Foundation of Guangdong Province; National Natural Science Foundation of China","keywords":"Biology; Myotome; Skeletal muscle; Cell biology; RNA-Seq; Embryonic stem cell; Cellular differentiation; Gene expression; Anatomy; Gene; Embryogenesis; Genetics; Embryo; Transcriptome; Somite","score_opus":0.018247328222378192,"score_gpt":0.26289031453052586,"score_spread":0.24464298630814768,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4318763903","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.89699084,0.002125376,0.07243183,0.00019973466,0.000150125,0.00019112692,0.021492707,0.00093779917,0.0054804916],"genre_scores_gemma":[0.83155304,0.0015631183,0.12350407,0.00074565125,0.000073941155,0.00070731825,0.035191737,0.0005788725,0.0060822135],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997042,0.000022043969,0.000015633692,0.00012828338,0.000094651696,0.000035183723],"domain_scores_gemma":[0.99979514,0.00006840954,0.00003282407,0.00002515622,0.000052079235,0.000026480106],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004794517,0.0002329068,0.00047647953,0.0006041624,0.00042204215,0.00040907363,0.00035297713,0.00045172015,0.0008876523],"category_scores_gemma":[0.00027157945,0.00021418223,0.00053638424,0.00056080025,0.00033458497,0.00012756173,0.0003191187,0.0004743899,0.00048603365],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000085637395,0.000019930656,0.0043522185,0.00018136128,0.000033629567,0.000111825226,0.0001137499,0.00070109806,0.98631996,0.00029334179,0.00052108685,0.007266111],"study_design_scores_gemma":[0.000068362286,0.00044737605,0.37020457,0.00010849074,0.00031321586,0.0012484179,0.00040836039,0.037033066,0.54862124,0.0011941076,0.040230196,0.00012269823],"about_ca_topic_score_codex":0.0015430907,"about_ca_topic_score_gemma":0.003823828,"teacher_disagreement_score":0.0015430907,"about_ca_system_score_codex":0.000264924,"about_ca_system_score_gemma":0.00042291166,"threshold_uncertainty_score":0.0030682683},"labels":[],"label_agreement":null},{"id":"W4319079226","doi":"10.1186/s12915-022-01475-0","title":"Genome-wide screening reveals the genetic basis of mammalian embryonic eye development","year":2023,"lang":"en","type":"article","venue":"BMC Biology","topic":"Ocular Disorders and Treatments","field":"Biochemistry, Genetics and Molecular Biology","cited_by":23,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Hospital for Sick Children; Toronto Centre for Phenogenomics; Lunenfeld-Tanenbaum Research Institute","funders":"National Eye Institute; National Human Genome Research Institute; National Institutes of Health; Medical Research Council; Genome Canada","keywords":"Eye development; Microphthalmia; Biology; Anophthalmia; Coloboma; Genetics; PAX6; Gene knockout; Gene; Candidate gene; Phenotype","score_opus":0.018941780820543173,"score_gpt":0.261760963875831,"score_spread":0.2428191830552878,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4319079226","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9421985,0.0069344374,0.01066063,0.00019207541,0.000024658773,0.00007819983,0.036726948,0.00052077364,0.0026637597],"genre_scores_gemma":[0.8697222,0.0047445376,0.019568201,0.00032614716,0.00002832428,0.00014060683,0.10395648,0.00016660319,0.0013469021],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.999553,0.000039225335,0.000039667204,0.0001567754,0.00016710075,0.00004416646],"domain_scores_gemma":[0.99938774,0.00021169044,0.00023857603,0.000053070493,0.00006392513,0.000044844295],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00051043084,0.00044827373,0.0005446115,0.001675495,0.00027014155,0.00047520385,0.00038922316,0.00037578307,0.0011480105],"category_scores_gemma":[0.000581005,0.00017117854,0.00061409984,0.0019468756,0.00017995694,0.00011676069,0.00034379438,0.00038140407,0.0006365263],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00050947844,0.00007939774,0.07586885,0.00074597227,0.00035195693,0.0015647932,0.000096185686,0.0007070282,0.89137095,0.00048078533,0.00161914,0.026605478],"study_design_scores_gemma":[0.00006990398,0.0003924743,0.7587117,0.00010036313,0.0008467749,0.005259668,0.000110645466,0.0033743046,0.20341146,0.0005201116,0.027164083,0.000038549424],"about_ca_topic_score_codex":0.00087833154,"about_ca_topic_score_gemma":0.0017614741,"teacher_disagreement_score":0.001675495,"about_ca_system_score_codex":0.00026646134,"about_ca_system_score_gemma":0.00041194996,"threshold_uncertainty_score":0.003840506},"labels":[],"label_agreement":null},{"id":"W4323975101","doi":"10.1186/s12915-023-01541-1","title":"A phylogenomic analysis of Limosilactobacillus reuteri reveals ancient and stable evolutionary relationships with rodents and birds and zoonotic transmission to humans","year":2023,"lang":"en","type":"article","venue":"BMC Biology","topic":"Gut microbiota and health","field":"Biochemistry, Genetics and Molecular Biology","cited_by":37,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"Huazhong Agricultural University; Natural Sciences and Engineering Research Council of Canada; National Natural Science Foundation of China; Canada Research Chairs; University of Alberta","keywords":"Biology; Phylogenetic tree; Vertebrate; Phylogenetics; Evolutionary biology; Lineage (genetic); Host adaptation; Clade; Rodent; Host (biology); Zoology; Ecology; Gene; Genome; Genetics","score_opus":0.029020491424929924,"score_gpt":0.2740858041358749,"score_spread":0.24506531271094498,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4323975101","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9976628,0.0005328573,0.00062636245,0.000027110216,0.0000024687793,0.000012885564,0.0006884548,0.000011884943,0.0004352191],"genre_scores_gemma":[0.995089,0.00039766863,0.0019424036,0.000036521942,0.000007793424,0.000020583127,0.0022289315,0.000011291506,0.0002658839],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9998235,0.000021409807,0.000016312142,0.00006614594,0.000028738505,0.00004396033],"domain_scores_gemma":[0.99973387,0.000038435508,0.000116116666,0.000029008188,0.00003737563,0.000045232715],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00017196758,0.00036740283,0.00033768392,0.0012441089,0.0002814799,0.00038694515,0.00018021453,0.00023493996,0.0005060623],"category_scores_gemma":[0.0003155846,0.00013323719,0.000386107,0.000936716,0.00021346459,0.00019066529,0.00036819352,0.00031400778,0.00020370918],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006965787,0.00011318332,0.23433176,0.00015136764,0.00015261187,0.00052722625,0.0004520973,0.00025848887,0.7450347,0.00011905403,0.00011989318,0.01804307],"study_design_scores_gemma":[0.000010003431,0.00030538958,0.966225,0.000036425023,0.0001520001,0.0016449955,0.00059742556,0.0010042172,0.02763416,0.00010099255,0.0022741046,0.00001530841],"about_ca_topic_score_codex":0.0008503307,"about_ca_topic_score_gemma":0.0010743963,"teacher_disagreement_score":0.0012441089,"about_ca_system_score_codex":0.00013397317,"about_ca_system_score_gemma":0.00015429583,"threshold_uncertainty_score":0.0016930103},"labels":[],"label_agreement":null},{"id":"W4363625482","doi":"10.1186/s12915-023-01571-9","title":"Viral predation pressure on coral reefs","year":2023,"lang":"en","type":"article","venue":"BMC Biology","topic":"Coral and Marine Ecosystems Studies","field":"Environmental Science","cited_by":21,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"Gordon and Betty Moore Foundation; Canadian Institute for Advanced Research; Pew Charitable Trusts; National Oceanic and Atmospheric Administration; National Science Foundation","keywords":"Biology; Coral reef; Trophic level; Reef; Coral; Ecology; Coral reef fish; Predation; Coral bleaching; Benthic zone; Trophic cascade; Anthozoa; Environmental issues with coral reefs; Abiotic component; Context (archaeology); Food web","score_opus":0.025782298989960865,"score_gpt":0.25834414327263333,"score_spread":0.23256184428267246,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4363625482","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9994962,0.000056355155,0.000038662027,0.0000073386072,6.552317e-7,9.69278e-7,0.000090467605,0.0000029766309,0.00030637035],"genre_scores_gemma":[0.9997812,0.00003130161,0.000032974527,0.0000028442698,0.0000014676613,0.0000014278787,0.00008581358,8.122931e-7,0.00006221104],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99958664,0.00006401417,0.000029620734,0.00009442347,0.00013643273,0.00008877543],"domain_scores_gemma":[0.99788815,0.0004927014,0.00084842724,0.000104808896,0.00035258176,0.000313345],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00040216398,0.000305165,0.000370654,0.0009801311,0.00052964024,0.00089318055,0.00035150495,0.00020026535,0.0012506573],"category_scores_gemma":[0.002710901,0.0001618588,0.00032363512,0.00073513977,0.00054749707,0.00030629535,0.0012754276,0.0003026039,0.0001431864],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007325477,0.000013105343,0.9876423,0.000039290524,0.00006982943,0.000078652985,0.00016927409,0.0010395395,0.007870048,0.00007093105,0.000054807293,0.0028789307],"study_design_scores_gemma":[8.842402e-7,0.00003406635,0.9981369,0.0000034343932,0.000009138063,0.00006019899,0.00017033955,0.0011561745,0.0003032157,0.000048146376,0.000072887684,0.000004426305],"about_ca_topic_score_codex":0.019567559,"about_ca_topic_score_gemma":0.01920656,"teacher_disagreement_score":0.019567559,"about_ca_system_score_codex":0.00089954026,"about_ca_system_score_gemma":0.00037290546,"threshold_uncertainty_score":0.03890729},"labels":[],"label_agreement":null},{"id":"W4365483239","doi":"10.1186/s12915-023-01581-7","title":"Genomic and transcriptomic analyses support a silk gland origin of spider venom glands","year":2023,"lang":"en","type":"article","venue":"BMC Biology","topic":"Venomous Animal Envenomation and Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":26,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Chinese Academy of Sciences; University of Guelph","keywords":"Biology; Venom; Spider; Gene; Transcriptome; Evolutionary biology; Genetics; Gene expression; Zoology; Ecology","score_opus":0.06060690227237984,"score_gpt":0.3368204136942244,"score_spread":0.2762135114218445,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4365483239","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9831366,0.0015643549,0.008585527,0.000094184084,0.000020798701,0.00003573373,0.0047186203,0.00014952332,0.0016946978],"genre_scores_gemma":[0.9814693,0.00085746404,0.007884829,0.000111471345,0.00003018302,0.0000452306,0.00874763,0.000041514326,0.0008124402],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998846,0.0000058803244,0.000008233642,0.000054567216,0.000026578928,0.0000200912],"domain_scores_gemma":[0.99976796,0.00003998943,0.00008608433,0.000019466352,0.000045075783,0.000041528492],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00011519615,0.0002897354,0.00018999023,0.0006082269,0.00024374452,0.00031316082,0.00011913998,0.00021648832,0.0013338792],"category_scores_gemma":[0.0002266858,0.00007584362,0.00045194934,0.0006349827,0.00021891648,0.00022410548,0.0003274438,0.00028578512,0.00045778477],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000707221,0.000015036781,0.020054512,0.00019096733,0.00004063902,0.00017410704,0.00007763141,0.00008361487,0.9750181,0.00012419041,0.00006900586,0.004081582],"study_design_scores_gemma":[0.000013525391,0.00025598423,0.8709492,0.0000622533,0.00029881383,0.001927769,0.00032918382,0.0019039992,0.116038784,0.0009467926,0.0072526196,0.000021059748],"about_ca_topic_score_codex":0.00028543166,"about_ca_topic_score_gemma":0.00058788835,"teacher_disagreement_score":0.0013338792,"about_ca_system_score_codex":0.0001097371,"about_ca_system_score_gemma":0.00018065891,"threshold_uncertainty_score":0.0044623017},"labels":[],"label_agreement":null},{"id":"W4368618126","doi":"10.1186/s12915-023-01563-9","title":"Recent expansion of metabolic versatility in Diplonema papillatum, the model species of a highly speciose group of marine eukaryotes","year":2023,"lang":"en","type":"article","venue":"BMC Biology","topic":"Protist diversity and phylogeny","field":"Biochemistry, Genetics and Molecular Biology","cited_by":42,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University; McGill Genome Centre; Environment and Climate Change Canada; Université de Montréal","funders":"European Regional Development Fund; Fonds de recherche du Québec – Nature et technologies; Dalhousie University; Japan Society for the Promotion of Science; Natural Sciences and Engineering Research Council of Canada; Royal Society; Canadian Institutes of Health Research; Biotechnology and Biological Sciences Research Council; Gordon and Betty Moore Foundation; Grantová Agentura České Republiky; Sight Research UK; Directorate for Biological Sciences; Natural Environment Research Council","keywords":"Biology; Genome; Gene; Horizontal gene transfer; Evolutionary biology; Mobile genetic elements; Genetics; Ecology","score_opus":0.03246318522312385,"score_gpt":0.25223322905493667,"score_spread":0.2197700438318128,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4368618126","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9949463,0.0015027071,0.0011561175,0.000069899266,0.000008387139,0.000007541032,0.0013334092,0.000027042484,0.0009484462],"genre_scores_gemma":[0.99317294,0.00095097127,0.0020725857,0.000035822275,0.0000061268265,0.000010899419,0.0029381465,0.000010283505,0.00080212037],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.999926,0.000006285387,0.0000058842697,0.000035321445,0.0000140966085,0.000012484949],"domain_scores_gemma":[0.99981123,0.000027792888,0.0000725266,0.000018193123,0.000031026568,0.000039243027],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001016689,0.00022497404,0.00013609213,0.0004571965,0.00022945399,0.000446931,0.00014258338,0.00024090504,0.00067474815],"category_scores_gemma":[0.0002421698,0.00009585347,0.00014783973,0.0004631838,0.0002043566,0.0002740251,0.0003793231,0.00023171271,0.00023423674],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00045958746,0.000022230312,0.074636884,0.00037624149,0.00004563104,0.0005244661,0.00043696107,0.00034021787,0.8996695,0.000326587,0.00019200928,0.022969775],"study_design_scores_gemma":[0.0000217482,0.00035327603,0.871073,0.00005866395,0.00012013367,0.003390569,0.00093507295,0.0011861111,0.092948385,0.00057708664,0.02930298,0.000032960004],"about_ca_topic_score_codex":0.0008367941,"about_ca_topic_score_gemma":0.0010573117,"teacher_disagreement_score":0.0008367941,"about_ca_system_score_codex":0.00033784236,"about_ca_system_score_gemma":0.00017789638,"threshold_uncertainty_score":0.0024511814},"labels":[],"label_agreement":null},{"id":"W4376643434","doi":"10.1186/s12915-023-01591-5","title":"Natural variation in Beauty Mark is associated with UV-based geographical adaptation in Gossypium species","year":2023,"lang":"en","type":"article","venue":"BMC Biology","topic":"Plant Gene Expression Analysis","field":"Biochemistry, Genetics and Molecular Biology","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Biotechnology Research Institute","funders":"Agricultural Science and Technology Innovation Program; Chinese Academy of Agricultural Sciences; National Natural Science Foundation of China","keywords":"Gossypium barbadense; Biology; Nicotiana benthamiana; Anthocyanin; Botany; Gossypium; Single-nucleotide polymorphism; Genetics; Gene; Nicotiana; Solanaceae; Genotype","score_opus":0.01518667977244448,"score_gpt":0.2439066622891246,"score_spread":0.22871998251668013,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4376643434","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99947757,0.0000979642,0.00012976304,0.000010462388,0.0000019919469,0.0000035711134,0.0001142468,0.000008198859,0.00015617459],"genre_scores_gemma":[0.9993211,0.000046948044,0.00023355627,0.000015217761,0.0000026745788,0.000006536999,0.00023848824,0.0000068900285,0.00012861182],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99985576,0.000023673983,0.000012310818,0.00006464498,0.000025422589,0.000018294464],"domain_scores_gemma":[0.999688,0.000044629654,0.00015966833,0.000026718673,0.000023972585,0.000057010493],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014646676,0.00024520015,0.00022123005,0.0010135802,0.00026889375,0.0001956148,0.0001963741,0.00024283938,0.0011982174],"category_scores_gemma":[0.00024206613,0.00009818541,0.00027164185,0.0006532211,0.0002979292,0.000105643725,0.00027991566,0.00023849442,0.00010541831],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00049585715,0.00007984364,0.25299504,0.000098634555,0.00023878638,0.00048141228,0.00077732827,0.00015070986,0.73835427,0.00012795509,0.000110878136,0.00608927],"study_design_scores_gemma":[0.000003307508,0.00004283257,0.9981065,0.0000025507402,0.000017297096,0.0002003518,0.00006689826,0.000082098224,0.0012803766,0.000020657655,0.00017340758,0.0000038518074],"about_ca_topic_score_codex":0.0014662113,"about_ca_topic_score_gemma":0.0032737243,"teacher_disagreement_score":0.0014662113,"about_ca_system_score_codex":0.00022713082,"about_ca_system_score_gemma":0.00009112403,"threshold_uncertainty_score":0.004008472},"labels":[],"label_agreement":null},{"id":"W4376866348","doi":"10.1186/s12915-023-01609-y","title":"A small protein coded within the mitochondrial canonical gene nd4 regulates mitochondrial bioenergetics","year":2023,"lang":"en","type":"article","venue":"BMC Biology","topic":"Mitochondrial Function and Pathology","field":"Biochemistry, Genetics and Molecular Biology","cited_by":36,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval; PROTEO; Centre Hospitalier Universitaire de Sherbrooke; Université de Sherbrooke; Université de Montréal","funders":"HORIZON EUROPE Marie Sklodowska-Curie Actions; Fonds de Recherche du Québec - Santé; Université de Montréal; European Commission; Natural Sciences and Engineering Research Council of Canada; Canada Research Chairs; Université de Moncton","keywords":"Biology; Mitochondrial DNA; Gene; Open reading frame; Genetics; ORFS; Mitochondrion; Genome; Peptide sequence","score_opus":0.03268972995687597,"score_gpt":0.25977943755573696,"score_spread":0.227089707598861,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4376866348","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9783664,0.0036903073,0.013577604,0.0002998921,0.00015779244,0.00004276579,0.001045914,0.00028219153,0.0025371262],"genre_scores_gemma":[0.9847884,0.00077764766,0.0070747407,0.00008324887,0.000032241205,0.000034442422,0.001700589,0.000040404295,0.0054681976],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99993515,0.000006021856,0.0000034328555,0.000027102426,0.000015168933,0.0000131721745],"domain_scores_gemma":[0.99990475,0.000015112203,0.000029345263,0.000008431221,0.000017214754,0.000025239267],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00006948221,0.000385502,0.0001387246,0.00015837657,0.00026008624,0.0001789679,0.0002236084,0.00030511848,0.0020060865],"category_scores_gemma":[0.0001247774,0.00007125371,0.00023268172,0.00014782888,0.00032279143,0.00018694898,0.00024995452,0.0002887815,0.00073646364],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009869624,0.000010408143,0.000865752,0.00006470423,0.0000049538658,0.0001651088,0.000012277693,0.00003417069,0.99687433,0.0001452715,0.000082106504,0.0016421756],"study_design_scores_gemma":[0.000033037835,0.00020864073,0.032422647,0.000020610667,0.000041395917,0.0016399571,0.00008997915,0.0016708754,0.94731545,0.0003613484,0.016182698,0.000013225139],"about_ca_topic_score_codex":0.00035410502,"about_ca_topic_score_gemma":0.00036803592,"teacher_disagreement_score":0.0020060865,"about_ca_system_score_codex":0.0003587156,"about_ca_system_score_gemma":0.00018947462,"threshold_uncertainty_score":0.006711006},"labels":[],"label_agreement":null},{"id":"W4377115432","doi":"10.1186/s12915-023-01600-7","title":"Response to “Assessing the role of Piscine orthoreovirus in disease and the associated risk for wild Pacific salmon”","year":2023,"lang":"en","type":"letter","venue":"BMC Biology","topic":"Aquaculture disease management and microbiota","field":"Immunology and Microbiology","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia; Fisheries and Oceans Canada; Ministry of Agriculture, Food and Rural Affairs; Vancouver Island University","funders":"","keywords":"Biology; Disease; Virology; Zoology; Internal medicine","score_opus":0.0131156897592214,"score_gpt":0.26345213429300973,"score_spread":0.25033644453378834,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4377115432","genre_codex":"commentary","genre_gemma":"commentary","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"commentary","genre_consensus":"commentary","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0013810854,0.0004703475,0.00017422586,0.9708708,0.024896128,0.000038718797,0.0002580528,0.000045859717,0.0018649152],"genre_scores_gemma":[0.0035977953,0.00030608074,0.00026596632,0.9774154,0.013583338,0.00005585052,0.0000543069,0.000018574943,0.004702801],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99783933,0.00054078246,0.00031570464,0.0003590863,0.000541302,0.0004037019],"domain_scores_gemma":[0.99131596,0.0040860632,0.0008335922,0.00022110439,0.0020049734,0.0015382804],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0045336736,0.0008397276,0.0011340955,0.0006332018,0.0029247482,0.0025810183,0.0014713409,0.03771502,0.004803938],"category_scores_gemma":[0.017746178,0.00076569454,0.0011116227,0.0005378446,0.0018091765,0.0018606225,0.0015592574,0.02870259,0.0040842276],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00017110964,0.00008831033,0.0038799206,0.00009550363,0.000042974298,0.0019131106,0.00021906201,0.00010383512,0.0004891401,0.0006392788,0.9838755,0.008482111],"study_design_scores_gemma":[0.00023691583,0.00037969722,0.014334469,0.0006355118,0.00015660046,0.0023266694,0.0020551533,0.0013079549,0.0009523645,0.0050528566,0.9723713,0.00019052142],"about_ca_topic_score_codex":0.011730877,"about_ca_topic_score_gemma":0.018647857,"teacher_disagreement_score":0.03771502,"about_ca_system_score_codex":0.0037886128,"about_ca_system_score_gemma":0.0044928654,"threshold_uncertainty_score":0.02748841},"labels":[],"label_agreement":null},{"id":"W4377116049","doi":"10.1186/s12915-023-01548-8","title":"Assessing the role of Piscine orthoreovirus in disease and the associated risk for wild Pacific salmon","year":2023,"lang":"en","type":"letter","venue":"BMC Biology","topic":"Insect and Pesticide Research","field":"Agricultural and Biological Sciences","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Simon Fraser University; University of British Columbia; University of Toronto; Fisheries and Oceans Canada","funders":"","keywords":"Biology; Disease; Virology; Fishery; Zoology; Internal medicine","score_opus":0.04886300686089287,"score_gpt":0.3082809435231135,"score_spread":0.2594179366622207,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4377116049","genre_codex":"commentary","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.024398929,0.009166158,0.0013978108,0.917676,0.02918954,0.00009020676,0.00085066585,0.00012233337,0.017108427],"genre_scores_gemma":[0.20373005,0.013588149,0.003501541,0.6718252,0.059152246,0.00020488305,0.0010593869,0.00011808069,0.046820544],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9988417,0.00039396275,0.00017684781,0.00013821357,0.00029692767,0.00015230704],"domain_scores_gemma":[0.99281317,0.0030631565,0.00038193344,0.00031442134,0.0026274305,0.000799952],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0031919824,0.00027823463,0.00040096027,0.00035827947,0.00077687023,0.0008101051,0.0005051069,0.007200476,0.004712282],"category_scores_gemma":[0.01137598,0.0002102823,0.00032237996,0.00022285766,0.0006653364,0.0006613258,0.000503534,0.0049549304,0.0042974637],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005073668,0.00009611126,0.052866474,0.00026979527,0.000048283317,0.0041442644,0.000245527,0.000109647,0.0027108004,0.0012046009,0.792957,0.1448402],"study_design_scores_gemma":[0.00025943268,0.0010982866,0.09578271,0.0017863779,0.00019581437,0.01089107,0.0017755181,0.0024565673,0.0039611594,0.014791957,0.8668768,0.00012430124],"about_ca_topic_score_codex":0.007354712,"about_ca_topic_score_gemma":0.01082152,"teacher_disagreement_score":0.007354712,"about_ca_system_score_codex":0.0016376448,"about_ca_system_score_gemma":0.0011669736,"threshold_uncertainty_score":0.01688099},"labels":[],"label_agreement":null},{"id":"W4377138992","doi":"10.1186/s12915-023-01594-2","title":"Author Correction: Innate antiviral defense demonstrates high energetic efficiency in a bony fish","year":2023,"lang":"en","type":"erratum","venue":"BMC Biology","topic":"Physiological and biochemical adaptations","field":"Environmental Science","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ministry of Agriculture; University of British Columbia; Fisheries and Oceans Canada","funders":"","keywords":"Biology; Fish <Actinopterygii>; Innate immune system; Immunology; Fishery","score_opus":0.02277697759360976,"score_gpt":0.25073422414071866,"score_spread":0.22795724654710892,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4377138992","genre_codex":"editorial","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00033464486,0.00076699397,0.0008886343,0.03001596,0.96335053,0.000011723513,0.0007059043,0.0002694655,0.0036561135],"genre_scores_gemma":[0.031017335,0.007685904,0.00714096,0.057400797,0.36731708,0.00016496818,0.0028308234,0.0027231788,0.52371895],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9979797,0.00023547823,0.00026848767,0.0003667902,0.0009792823,0.00017036308],"domain_scores_gemma":[0.9888369,0.0026325346,0.0005774656,0.0006562171,0.006571904,0.0007249921],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0019059234,0.0016165383,0.0012253609,0.0020902466,0.0025448666,0.0025159244,0.0023630464,0.0049005295,0.044955928],"category_scores_gemma":[0.023375826,0.00067789806,0.0009344563,0.001135371,0.0021463465,0.0016018593,0.0016780053,0.0075150817,0.026632363],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00004345584,0.000005525496,0.00009766251,0.00012281428,0.0000110925785,0.0004971006,0.000035033092,0.00005670884,0.00019694344,0.0008435647,0.99163413,0.006456071],"study_design_scores_gemma":[0.000030829706,0.000021209811,0.00080512045,0.00016600899,0.00003791533,0.0011308076,0.000087276436,0.00022251882,0.0010513706,0.0012237948,0.99518967,0.000033409397],"about_ca_topic_score_codex":0.012294675,"about_ca_topic_score_gemma":0.015311883,"teacher_disagreement_score":0.044955928,"about_ca_system_score_codex":0.002598087,"about_ca_system_score_gemma":0.0032209116,"threshold_uncertainty_score":0.15039259},"labels":[],"label_agreement":null},{"id":"W4377292677","doi":"10.1186/s12915-023-01567-5","title":"Next steps after airing disagreement on a scientific issue with policy implications: a meta-analysis, multi-lab replication and adversarial collaboration","year":2023,"lang":"en","type":"letter","venue":"BMC Biology","topic":"Fish Ecology and Management Studies","field":"Environmental Science","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"Okinawa Institute of Science and Technology Graduate University","keywords":"Biology; Replication (statistics); Meta-analysis; Adversarial system; Work (physics); Coronavirus disease 2019 (COVID-19); Virology; Evolutionary biology; Political science; Law","score_opus":0.07233917832265788,"score_gpt":0.3170933442613428,"score_spread":0.2447541659386849,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4377292677","genre_codex":"commentary","genre_gemma":"empirical","domain_codex":null,"domain_gemma":"reproducibility","model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":"reproducibility","domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00029035864,0.0022230884,0.0005270611,0.98418415,0.012378786,0.000022750066,0.00006975103,0.000018133991,0.00028592822],"genre_scores_gemma":[0.005331846,0.0010133713,0.0025270353,0.97036684,0.019733332,0.00018693322,0.000037771468,0.000044358843,0.00075857376],"study_design_codex":"not_applicable","study_design_gemma":"meta_analysis","domain_scores_codex":[0.8252011,0.12471972,0.016893502,0.010156013,0.019305738,0.003723987],"domain_scores_gemma":[0.23797192,0.6706992,0.014855098,0.021917114,0.04088195,0.013674733],"candidate_categories":["metaresearch"],"consensus_categories":["metaresearch"],"category_scores_codex":[0.2572891,0.0011423118,0.004190368,0.0019635567,0.0071203834,0.008789261,0.0066850195,0.054031085,0.0058176867],"category_scores_gemma":[0.53233236,0.0013682037,0.004194957,0.0023200337,0.01098082,0.010734794,0.0060878512,0.03916826,0.0027940697],"study_design_candidate":"meta_analysis","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005080146,0.00007287692,0.0020857202,0.0008964511,0.0006700957,0.0014197207,0.0014975017,0.00017569696,0.00025298866,0.009725287,0.95594615,0.02674943],"study_design_scores_gemma":[0.0012501194,0.0002995023,0.0042495443,0.0072583263,0.0012651412,0.0018077726,0.003741531,0.0018686863,0.0008795869,0.15767391,0.81924,0.0004659151],"about_ca_topic_score_codex":0.011455813,"about_ca_topic_score_gemma":0.017196853,"teacher_disagreement_score":0.7427109,"about_ca_system_score_codex":0.010891683,"about_ca_system_score_gemma":0.021420687,"threshold_uncertainty_score":0.91589475},"labels":[],"label_agreement":null},{"id":"W4378071749","doi":"10.1186/s12915-023-01624-z","title":"A unique effector secreted by Pseudozyma flocculosa mediates its biocontrol activity","year":2023,"lang":"en","type":"article","venue":"BMC Biology","topic":"Plant-Microbe Interactions and Immunity","field":"Agricultural and Biological Sciences","cited_by":13,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval; Agriculture and Agri-Food Canada","funders":"Centre Hospitalier Universitaire de Québec; Canada Research Chairs; Génome Québec; Coordenação de Aperfeiçoamento de Pessoal de Nível Superior; Genome Canada; Ministère de l'Agriculture, des Pêcheries et de l'Alimentation; Fonds de recherche du Québec – Nature et technologies; Université Laval","keywords":"Effector; Biology; Powdery mildew; Blumeria graminis; Protein–protein interaction; Cell biology; Chitinase; Secretion; Genetics; Microbiology; Gene; Biochemistry; Botany; Plant disease resistance","score_opus":0.021880322124168974,"score_gpt":0.2513178279603837,"score_spread":0.22943750583621475,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4378071749","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99424756,0.00063322304,0.0036557661,0.00007912827,0.00001693143,0.000020780819,0.0002900665,0.000099242374,0.0009572482],"genre_scores_gemma":[0.9959286,0.0002184163,0.0018634779,0.000033587476,0.0000060911907,0.000017624638,0.00059044803,0.000021642196,0.0013201579],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999131,0.000007762085,0.000006399439,0.00002647525,0.000024910032,0.000021335207],"domain_scores_gemma":[0.9999075,0.000012380357,0.00003015132,0.000013394314,0.000015887872,0.000020666434],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000086413485,0.00054000696,0.00023925236,0.0001407099,0.00010734067,0.00031697072,0.00015895798,0.00035977503,0.000795233],"category_scores_gemma":[0.00011201353,0.00007733644,0.00030381803,0.000101104866,0.00015320787,0.00029435172,0.00038383936,0.0004092642,0.0004863669],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000024980058,0.000011372154,0.00026889847,0.000022026145,0.0000020168643,0.00005448269,0.000007225198,0.00002270973,0.99900633,0.000024550856,0.000012230353,0.0005431771],"study_design_scores_gemma":[0.000010332267,0.00016897942,0.012903308,0.000006546671,0.000015016209,0.00062599144,0.000047823833,0.0010316711,0.9832412,0.00005429413,0.0018891555,0.0000056924214],"about_ca_topic_score_codex":0.00014710471,"about_ca_topic_score_gemma":0.00011043413,"teacher_disagreement_score":0.000795233,"about_ca_system_score_codex":0.00012507175,"about_ca_system_score_gemma":0.00011423038,"threshold_uncertainty_score":0.002660334},"labels":[],"label_agreement":null},{"id":"W4378173293","doi":"10.1186/s12915-023-01610-5","title":"Molecular drivers of insecticide resistance in the Sahelo-Sudanian populations of a major malaria vector Anopheles coluzzii","year":2023,"lang":"en","type":"article","venue":"BMC Biology","topic":"Malaria Research and Control","field":"Medicine","cited_by":68,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Brock University","funders":"Wellcome Trust","keywords":"Biology; Genetics; Vector (molecular biology); Gene; Malaria; Permethrin; Anopheles; Single-nucleotide polymorphism; Pyrethroid; Genotype; Pesticide; Ecology","score_opus":0.03518725588661738,"score_gpt":0.3158833585047438,"score_spread":0.28069610261812644,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4378173293","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99954766,0.000089732,0.00006430715,0.0000107682645,9.658766e-7,0.000003484168,0.00011802249,0.0000016450529,0.00016344302],"genre_scores_gemma":[0.99937266,0.00007061131,0.00015783825,0.000013473925,0.0000014760657,0.0000075212715,0.00024171776,0.0000012156581,0.00013359047],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99993956,0.00000856707,0.000002960474,0.000020348118,0.00000978209,0.000018772722],"domain_scores_gemma":[0.99989283,0.000018915987,0.00005425347,0.000004497078,0.000012637627,0.000016817923],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00008080427,0.00020375891,0.00011600072,0.00050230126,0.00019819647,0.00022347496,0.00013496279,0.00013807398,0.0008514658],"category_scores_gemma":[0.00016601599,0.00006033395,0.00007837771,0.0003756187,0.00016883522,0.00006457089,0.00017417892,0.00018987141,0.0000791102],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00042024034,0.000077649805,0.30059335,0.000105934276,0.00006712709,0.0006908399,0.0009820148,0.0002401748,0.6836841,0.00025307687,0.0001628432,0.012722595],"study_design_scores_gemma":[0.000008614325,0.0000685766,0.9930791,0.000010545889,0.000022560396,0.00036659377,0.00052628847,0.00027022968,0.0049092993,0.000046890626,0.0006871245,0.0000040433215],"about_ca_topic_score_codex":0.003948922,"about_ca_topic_score_gemma":0.0057543754,"teacher_disagreement_score":0.003948922,"about_ca_system_score_codex":0.0002668254,"about_ca_system_score_gemma":0.00012903677,"threshold_uncertainty_score":0.007851899},"labels":[],"label_agreement":null},{"id":"W4379534280","doi":"10.1186/s12915-023-01635-w","title":"Contrasting outcomes of genome reduction in mikrocytids and microsporidians","year":2023,"lang":"en","type":"article","venue":"BMC Biology","topic":"Protist diversity and phylogeny","field":"Biochemistry, Genetics and Molecular Biology","cited_by":27,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Fisheries and Oceans Canada; University of British Columbia","funders":"Fisheries and Oceans Canada; Natural Sciences and Engineering Research Council of Canada; Science for Life Laboratory; Svenska Forskningsrådet Formas; Vetenskapsrådet; Gordon and Betty Moore Foundation","keywords":"Biology; Genome; Evolutionary biology; Genetics; Computational biology; Gene","score_opus":0.018187477524807448,"score_gpt":0.2567378374631485,"score_spread":0.23855035993834103,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4379534280","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9973168,0.0003934517,0.00088489405,0.000029907971,0.00000428699,0.000006555421,0.0005496123,0.00004439608,0.0007700252],"genre_scores_gemma":[0.99239266,0.00019322925,0.0028173847,0.000066831046,0.0000070011397,0.000029962812,0.003616419,0.000049905768,0.0008266401],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99981946,0.000014191329,0.000015011791,0.000076357166,0.000034924073,0.000040137445],"domain_scores_gemma":[0.9995745,0.00008881787,0.0001343892,0.000046117322,0.00006048743,0.00009561957],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015051085,0.0002896697,0.00027244329,0.0005932166,0.00039676618,0.00044690652,0.00032946226,0.00044069177,0.0009252835],"category_scores_gemma":[0.0006133415,0.00020050647,0.00033235166,0.00039733085,0.00031317424,0.00040402095,0.00065371586,0.00048574535,0.00031177799],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00040882017,0.000019949259,0.02545813,0.00020182443,0.000043487456,0.00022307906,0.00057130837,0.00028121631,0.96779376,0.00045349752,0.00008056152,0.0044643525],"study_design_scores_gemma":[0.000021402477,0.0004320668,0.85148335,0.0000440859,0.000115551615,0.0013973782,0.00082721043,0.0017581726,0.13505198,0.0007603118,0.008061135,0.0000474117],"about_ca_topic_score_codex":0.0007171876,"about_ca_topic_score_gemma":0.001333029,"teacher_disagreement_score":0.0009252835,"about_ca_system_score_codex":0.00034199448,"about_ca_system_score_gemma":0.0001772724,"threshold_uncertainty_score":0.0030953288},"labels":[],"label_agreement":null},{"id":"W4381248763","doi":"10.1186/s12915-023-01619-w","title":"The compact genome of the sponge Oopsacas minuta (Hexactinellida) is lacking key metazoan core genes","year":2023,"lang":"en","type":"article","venue":"BMC Biology","topic":"Marine Sponges and Natural Products","field":"Biochemistry, Genetics and Molecular Biology","cited_by":29,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"Agence Nationale de la Recherche; Aix-Marseille Université","keywords":"Biology; Genome; Phylum; Convergent evolution; Comparative genomics; Evolutionary biology; Sponge; Evolutionary developmental biology; Genomics; Gene; Comparative biology; Archaea; Genome size; Phylogenetics; Genetics; Botany","score_opus":0.0495874093568018,"score_gpt":0.2999717428509777,"score_spread":0.25038433349417594,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4381248763","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9904847,0.0011003867,0.0023536452,0.00006990842,0.000014215603,0.000011744377,0.0049966043,0.00018725422,0.00078155816],"genre_scores_gemma":[0.9807566,0.0007862342,0.0048377505,0.00009136443,0.000013177931,0.000039810075,0.012457354,0.00010038957,0.0009173326],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99991727,0.0000041837725,0.0000063464436,0.000037931364,0.000023472048,0.000010809088],"domain_scores_gemma":[0.99963367,0.000072884926,0.00015721239,0.00005289011,0.000029945992,0.000053428506],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00006669922,0.00040668764,0.00030896248,0.0003642036,0.00029261498,0.0004431722,0.00021115346,0.0002675045,0.0011880957],"category_scores_gemma":[0.00031879393,0.00018151222,0.0003620003,0.0005347122,0.00027829935,0.00024440238,0.0004399268,0.00024683037,0.00039087315],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00028186955,0.000015051167,0.014365739,0.00043314733,0.0000686925,0.0003710264,0.00024261855,0.00022077253,0.9734095,0.00020068929,0.00022160936,0.0101693235],"study_design_scores_gemma":[0.00004997091,0.00046670076,0.70420986,0.00019023112,0.00059236115,0.0068348018,0.00083858694,0.0022852926,0.24374984,0.0009523978,0.039770827,0.00005901257],"about_ca_topic_score_codex":0.0013444127,"about_ca_topic_score_gemma":0.0026324687,"teacher_disagreement_score":0.0013444127,"about_ca_system_score_codex":0.00021768115,"about_ca_system_score_gemma":0.0003982759,"threshold_uncertainty_score":0.0039746165},"labels":[],"label_agreement":null},{"id":"W4386200561","doi":"10.1186/s12915-023-01683-2","title":"Differential functions of RhoGDIβ in malignant transformation and progression of urothelial cell following N-butyl-N-(4-hydmoxybutyl) nitrosamine exposure","year":2023,"lang":"en","type":"article","venue":"BMC Biology","topic":"Protein Kinase Regulation and GTPase Signaling","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Natural Science Foundation of China; School of Medicine, New York University; Scientific Research Foundation of Education Department of Anhui Province of China; York University","keywords":"Biology; Nitrosamine; Cancer research; Cell; Transformation (genetics); Malignant transformation; Differential (mechanical device); Cell biology; Cell growth; Carcinogen; Genetics; Gene","score_opus":0.012587475061193334,"score_gpt":0.26063894665888393,"score_spread":0.2480514715976906,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4386200561","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99519724,0.0027129147,0.0008656038,0.000063030224,0.000016671827,0.000015674956,0.0003090865,0.000030118123,0.00078952766],"genre_scores_gemma":[0.9967193,0.0010001388,0.000581672,0.000025017627,0.0000053504887,0.000037554582,0.00038615975,0.0000053148387,0.0012394928],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998982,0.000016724336,0.000008951422,0.000022623042,0.00002463035,0.000028808377],"domain_scores_gemma":[0.9999362,0.0000060353736,0.000019139412,0.000008241122,0.000012905545,0.000017433948],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000101621015,0.00018168209,0.00020399492,0.00021343408,0.0001347948,0.00016917281,0.0000920929,0.00017562982,0.0008299917],"category_scores_gemma":[0.00007523092,0.000104610794,0.00029371204,0.00014380224,0.00017671262,0.00014961483,0.00015590875,0.00032712895,0.00018958739],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00018466648,0.000019093595,0.0012775077,0.000034778972,0.000005014267,0.000065753375,0.000033817414,0.00002274607,0.9974722,0.000023824676,0.000020599315,0.0008399657],"study_design_scores_gemma":[0.000007641023,0.0005972879,0.06908587,0.000009464154,0.00002309721,0.0003835034,0.00018760654,0.00046233335,0.9273321,0.000055402572,0.0018487867,0.0000069116536],"about_ca_topic_score_codex":0.00060343154,"about_ca_topic_score_gemma":0.0008156442,"teacher_disagreement_score":0.0008299917,"about_ca_system_score_codex":0.00016987209,"about_ca_system_score_gemma":0.00014503708,"threshold_uncertainty_score":0.0027766228},"labels":[],"label_agreement":null},{"id":"W4386594452","doi":"10.1186/s12915-023-01687-y","title":"Diversity of RNA viruses in the cosmopolitan monoxenous trypanosomatid Leptomonas pyrrhocoris","year":2023,"lang":"en","type":"article","venue":"BMC Biology","topic":"Research on Leishmaniasis Studies","field":"Medicine","cited_by":10,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"European Regional Development Fund; Grantová Agentura České Republiky","keywords":"Biology; Reassortment; Phylogenetic tree; Crithidia; Host (biology); RNA; Genetics; Phylogenetics; RNA virus; Virology; Zoology; Protozoa; Gene","score_opus":0.1204299811191661,"score_gpt":0.3699348336589333,"score_spread":0.24950485253976723,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4386594452","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9992343,0.0001858982,0.00013332076,0.0000065836966,0.0000010370422,0.0000060864795,0.00012586264,0.0000021769752,0.00030473396],"genre_scores_gemma":[0.9989882,0.000118840886,0.00032357275,0.000008775283,0.0000034088107,0.000009739642,0.00036870776,0.0000011194046,0.00017752708],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9998505,0.000014789059,0.000014670793,0.000061587474,0.000028175296,0.00003027563],"domain_scores_gemma":[0.99977154,0.00005159857,0.000091554684,0.000014373022,0.000033498396,0.000037448688],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000117768956,0.00016333757,0.0001354921,0.00080697786,0.0003667278,0.00045642312,0.00012818175,0.00025696968,0.0006867334],"category_scores_gemma":[0.0002624637,0.000088348745,0.00013891587,0.00034887422,0.00022091261,0.00029571852,0.0003174655,0.00015661755,0.00017226348],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00037021603,0.00005560763,0.20477001,0.00011575574,0.000027773935,0.00029385972,0.0011175207,0.00011930785,0.784551,0.00011699075,0.000034619094,0.008427352],"study_design_scores_gemma":[0.000012983555,0.0005228375,0.96265626,0.00002666849,0.000050958923,0.0014890512,0.0008852121,0.00048341329,0.031820837,0.000110702385,0.0019307345,0.000010282167],"about_ca_topic_score_codex":0.0007560768,"about_ca_topic_score_gemma":0.0010000684,"teacher_disagreement_score":0.00080697786,"about_ca_system_score_codex":0.00018821671,"about_ca_system_score_gemma":0.00011423126,"threshold_uncertainty_score":0.0022973418},"labels":[],"label_agreement":null},{"id":"W4387359136","doi":"10.1186/s12915-023-01707-x","title":"Genetic and cultural adaptations underlie the establishment of dairy pastoralism in the Tibetan Plateau","year":2023,"lang":"en","type":"article","venue":"BMC Biology","topic":"Digestive system and related health","field":"Biochemistry, Genetics and Molecular Biology","cited_by":12,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Royal Ontario Museum","funders":"Youth Innovation Promotion Association of the Chinese Academy of Sciences; Youth Innovation Promotion Association; Chinese Academy of Sciences; National Natural Science Foundation of China","keywords":"Pastoralism; Domestication; Biology; Plateau (mathematics); Allele; Livestock; Steppe; Evolutionary biology; Zoology; Ecology; Genetics; Gene","score_opus":0.03841153332737041,"score_gpt":0.3056892951281068,"score_spread":0.26727776180073637,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4387359136","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99918646,0.0001871526,0.00015361285,0.000028865808,0.000001134852,0.0000024815004,0.000046298122,0.0000026482253,0.0003913176],"genre_scores_gemma":[0.9995615,0.00010357033,0.000121972036,0.000010321137,0.0000026797827,0.00000287223,0.00007362084,9.1283937e-7,0.00012264085],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9999007,0.000028227598,0.000006645263,0.000024958563,0.000012719682,0.00002667397],"domain_scores_gemma":[0.9998543,0.000021498097,0.000056367393,0.000009589637,0.000022579092,0.00003570956],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003776685,0.00012621832,0.00014610073,0.00047821042,0.00038841288,0.0005040272,0.00018098787,0.00020451353,0.001168586],"category_scores_gemma":[0.00032404638,0.00007057019,0.00012728616,0.00070289284,0.00046390714,0.00016665072,0.00027280537,0.00020958774,0.000071587434],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00040369053,0.00005280376,0.8653523,0.00012906553,0.0001457472,0.0010735678,0.0031676623,0.00041690108,0.10860712,0.001057457,0.00014319533,0.0194505],"study_design_scores_gemma":[0.0000039061642,0.00004151436,0.99762505,0.000012468913,0.00001584822,0.0001795384,0.00075497135,0.00026690363,0.0004072264,0.00039179373,0.00029633642,0.0000045353027],"about_ca_topic_score_codex":0.0050234753,"about_ca_topic_score_gemma":0.0078000375,"teacher_disagreement_score":0.0050234753,"about_ca_system_score_codex":0.00036375478,"about_ca_system_score_gemma":0.00030675824,"threshold_uncertainty_score":0.009988487},"labels":[],"label_agreement":null},{"id":"W4387823712","doi":"10.1186/s12915-023-01730-y","title":"The BAF chromatin remodeling complex licenses planarian stem cells access to ectodermal and mesodermal cell fates","year":2023,"lang":"en","type":"article","venue":"BMC Biology","topic":"Planarian Biology and Electrostimulation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hospital for Sick Children; University of Toronto","funders":"Institute of Genetics; Hospital for Sick Children; Oregon Health and Science University","keywords":"Planarian; Biology; Cell biology; Stem cell; Chromatin; Chromatin remodeling; Regeneration (biology); Cellular differentiation; Ectoderm; Transcription factor; Flatworm; Cell fate determination; Genetics; Gene; Embryo; Embryogenesis","score_opus":0.04402304424224246,"score_gpt":0.29427602533594877,"score_spread":0.2502529810937063,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4387823712","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98895603,0.0016103251,0.0052399724,0.00012937975,0.000022086882,0.000027331203,0.00074226107,0.0003564197,0.0029161738],"genre_scores_gemma":[0.99340594,0.00038906888,0.0020685112,0.000049716706,0.000008476181,0.000020246205,0.0009929839,0.00007235725,0.002992662],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99986255,0.000013127253,0.000007408789,0.000035726953,0.00004601663,0.000035184967],"domain_scores_gemma":[0.99981326,0.000024741797,0.00006184686,0.000028010554,0.000019353003,0.00005280989],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001034622,0.00040699908,0.00014669877,0.00039162714,0.00022129904,0.0004611603,0.00022023312,0.00026581305,0.0015342049],"category_scores_gemma":[0.00015130443,0.00018743232,0.00018208966,0.00014367465,0.0003201374,0.00016615202,0.0003004585,0.00041132254,0.0005559429],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000026839693,0.0000038051062,0.00026718323,0.000014954931,0.0000031319057,0.000011992697,0.000005531531,0.000020470872,0.99876237,0.000085145526,0.000027972443,0.0007707112],"study_design_scores_gemma":[0.000010249267,0.000046057463,0.010054285,0.0000043379755,0.000014147792,0.0001127347,0.000022094315,0.0006560323,0.98354477,0.000052220614,0.0054791705,0.0000038981343],"about_ca_topic_score_codex":0.0012875472,"about_ca_topic_score_gemma":0.002370238,"teacher_disagreement_score":0.0015342049,"about_ca_system_score_codex":0.00040679952,"about_ca_system_score_gemma":0.0002733086,"threshold_uncertainty_score":0.005132377},"labels":[],"label_agreement":null},{"id":"W4387937435","doi":"10.1186/s12915-023-01741-9","title":"Contaminants from dredged sediments alter the transcriptome of Manila clam and induce shifts in microbiota composition","year":2023,"lang":"en","type":"article","venue":"BMC Biology","topic":"Environmental Toxicology and Ecotoxicology","field":"Environmental Science","cited_by":15,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Huntsman Marine Science Centre","funders":"Università degli Studi di Padova; Ministero dell’Istruzione, dell’Università e della Ricerca","keywords":"Biology; Transcriptome; Composition (language); Ecology; Contamination; Zoology; Gene expression; Genetics; Gene","score_opus":0.01950945035460846,"score_gpt":0.24937926737275506,"score_spread":0.2298698170181466,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4387937435","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99646497,0.0011241479,0.00073302083,0.00007012771,0.000028353725,0.000010045421,0.0010124242,0.00002732895,0.0005296148],"genre_scores_gemma":[0.9916716,0.000754294,0.0009781525,0.00021754473,0.000012277402,0.000038234015,0.0020490056,0.000025646788,0.0042532124],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.999856,0.0000106628695,0.0000071668273,0.00005869312,0.000027482429,0.00003999776],"domain_scores_gemma":[0.9999107,0.0000109071825,0.000022527045,0.000009506803,0.000023617891,0.000022770535],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00010781613,0.0003346411,0.0003133932,0.0002382678,0.00026474876,0.00036191856,0.0001455887,0.00034117713,0.0010572381],"category_scores_gemma":[0.00019734452,0.00018074077,0.0003858423,0.00016878404,0.0002211227,0.00019622286,0.0004678212,0.00043471874,0.00023665828],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00023450621,0.00001790939,0.006828244,0.00012117955,0.000021649726,0.000096527394,0.00015531963,0.00012752252,0.9891266,0.00002615835,0.00008905996,0.0031552229],"study_design_scores_gemma":[0.000021616765,0.0012759526,0.644325,0.00012383709,0.00012469343,0.00051753735,0.001468398,0.0011803845,0.34270403,0.00022872053,0.0079794815,0.00005036715],"about_ca_topic_score_codex":0.0022724126,"about_ca_topic_score_gemma":0.00523233,"teacher_disagreement_score":0.0022724126,"about_ca_system_score_codex":0.0003030748,"about_ca_system_score_gemma":0.00026900478,"threshold_uncertainty_score":0.0045183897},"labels":[],"label_agreement":null},{"id":"W4387937481","doi":"10.1186/s12915-023-01717-9","title":"Uncovering the history of recombination and population structure in western Canadian stripe rust populations through mating type alleles","year":2023,"lang":"en","type":"article","venue":"BMC Biology","topic":"Wheat and Barley Genetics and Pathology","field":"Agricultural and Biological Sciences","cited_by":24,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of Alberta; University of Saskatchewan; Agriculture and Agri-Food Canada; University of British Columbia; University of British Columbia Hospital","funders":"Saskatchewan Wheat Development Commission; Alberta Wheat Commission; Genome British Columbia; Natural Sciences and Engineering Research Council of Canada; Manitoba Crop Alliance; Western Grains Research Foundation","keywords":"Biology; Allele; Recombination; Genetics; Mating; Mating type; Evolutionary biology; Population genetics; Population; Population structure; Mating system; Gene; Demography","score_opus":0.0663860925769971,"score_gpt":0.2605211661039363,"score_spread":0.19413507352693918,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4387937481","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99339217,0.00046059742,0.0011948817,0.00007533552,0.000008274639,0.000026696984,0.0019587453,0.000034062436,0.0028491355],"genre_scores_gemma":[0.99428225,0.0003407344,0.0016236202,0.00008397956,0.000004063541,0.00001570131,0.0022187075,0.000028741422,0.0014023309],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99972004,0.0000088003235,0.0000058364853,0.00009523323,0.000081020495,0.000089026296],"domain_scores_gemma":[0.9995308,0.00003372803,0.00008912521,0.000023885254,0.00024061375,0.000081951424],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00027669314,0.00024065435,0.00027338677,0.0020204182,0.0018924582,0.00082330534,0.00057109765,0.00028297972,0.0014529348],"category_scores_gemma":[0.0006105193,0.00015555933,0.00029839683,0.0022585585,0.0005486374,0.00022213894,0.000498538,0.0005361576,0.00017305865],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00043947267,0.00007587858,0.74482256,0.00020911066,0.00021376317,0.00057505956,0.006765349,0.0011628793,0.18643078,0.001386218,0.001735743,0.05618313],"study_design_scores_gemma":[0.0000049440337,0.000024824307,0.99249625,0.000017356324,0.0000377398,0.00014022864,0.0009712239,0.00054929,0.0016991949,0.00008466048,0.0039527533,0.000021513395],"about_ca_topic_score_codex":0.8398655,"about_ca_topic_score_gemma":0.93436754,"teacher_disagreement_score":0.1601345,"about_ca_system_score_codex":0.0069785677,"about_ca_system_score_gemma":0.006445849,"threshold_uncertainty_score":0.32215506},"labels":[],"label_agreement":null},{"id":"W4388076868","doi":"10.1186/s12915-023-01732-w","title":"PFTK1 kinase regulates axogenesis during development via RhoA activation","year":2023,"lang":"en","type":"article","venue":"BMC Biology","topic":"Cancer-related Molecular Pathways","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary; Ottawa Hospital; University of Ottawa","funders":"Canadian Institutes of Health Research; Parkinson's Disease Foundation; Parkinson Society Canada; Heart and Stroke Foundation of Canada; Canadian Stroke Network; Michael J. Fox Foundation for Parkinson's Research","keywords":"RHOA; Biology; Cell biology; Phosphorylation; Axon; Kinase; Axon guidance; Nervous system; Neurite; GTPase; Cyclin-dependent kinase; Drosophila melanogaster; Neuroscience; Signal transduction; Cell cycle; Cell; Genetics; Gene","score_opus":0.028040704478612354,"score_gpt":0.27087038606622976,"score_spread":0.24282968158761742,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4388076868","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98469144,0.004238622,0.0050839093,0.00023982083,0.000037537837,0.00004099827,0.0007955803,0.00024735526,0.0046246764],"genre_scores_gemma":[0.992849,0.0013334637,0.0021317815,0.000023253777,0.00000791628,0.00002591204,0.0005478085,0.000024953919,0.0030558296],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99991596,0.000010035004,0.000006368541,0.00002124692,0.000020896801,0.000025519537],"domain_scores_gemma":[0.99992883,0.000008296671,0.000028876018,0.000006478743,0.000009802549,0.000017783417],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009514289,0.00034510758,0.00010398245,0.00022779644,0.00025216583,0.0002518047,0.00018415645,0.00021615997,0.00156477],"category_scores_gemma":[0.000098434306,0.0000946879,0.00017847029,0.00011053716,0.00021671261,0.00021199207,0.00018950156,0.00035386815,0.00066646724],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011319164,0.0000098344435,0.00033129088,0.000047969737,0.0000016768234,0.00008865047,0.000010869812,0.00006617059,0.9975668,0.00019740859,0.000054421103,0.0015116901],"study_design_scores_gemma":[0.0000111891595,0.00007791037,0.009420058,0.0000095358655,0.000009194635,0.0004914707,0.000021630518,0.00071522786,0.985388,0.000108599495,0.0037436308,0.0000036023262],"about_ca_topic_score_codex":0.0004361845,"about_ca_topic_score_gemma":0.00064230827,"teacher_disagreement_score":0.00156477,"about_ca_system_score_codex":0.000475987,"about_ca_system_score_gemma":0.00023767877,"threshold_uncertainty_score":0.0052346587},"labels":[],"label_agreement":null},{"id":"W4388617498","doi":"10.1186/s12915-023-01751-7","title":"A systematic review of the development and application of home cage monitoring in laboratory mice and rats","year":2023,"lang":"en","type":"review","venue":"BMC Biology","topic":"Animal Behavior and Welfare Studies","field":"Veterinary","cited_by":68,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Innovation Cluster (Canada)","funders":"Bundesinstitut für Risikobewertung; Bundesministerium für Bildung, Wissenschaft und Forschung; Jane ja Aatos Erkon Säätiö; Deutsche Forschungsgemeinschaft","keywords":"Biology; Cage; Computational biology; Engineering","score_opus":0.11882274969478117,"score_gpt":0.40128013671188306,"score_spread":0.2824573870171019,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4388617498","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0005385664,0.9979728,0.00017544352,0.00022056373,0.00011599405,0.00018559571,0.0004815791,0.000009324967,0.00030014923],"genre_scores_gemma":[0.0043206676,0.99391526,0.00057787343,0.00041251813,0.00006971471,0.00034039046,0.00026964516,0.000006708258,0.000087188615],"study_design_codex":"systematic_review","study_design_gemma":"systematic_review","domain_scores_codex":[0.9884952,0.0034103955,0.0048487606,0.0008390348,0.00215495,0.00025170323],"domain_scores_gemma":[0.9485073,0.03742838,0.00852226,0.0007097625,0.004433806,0.00039843807],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.010565408,0.0014730716,0.0068113822,0.01689911,0.00064374454,0.0028683408,0.0026285707,0.001932328,0.005718105],"category_scores_gemma":[0.05109913,0.0010152439,0.006831427,0.014816335,0.0012364967,0.002996696,0.0018005105,0.0011420567,0.00059897726],"study_design_candidate":"systematic_review","study_design_consensus":"systematic_review","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000812327,0.000011422879,0.00041704613,0.95746017,0.0017387166,0.00008295661,0.0001977858,0.000049691134,0.00014567407,0.00021960791,0.001699439,0.037896376],"study_design_scores_gemma":[0.00008109143,0.00012179245,0.0029262458,0.94267625,0.018098557,0.00034661393,0.00022292115,0.00004473385,0.00014961637,0.00026065976,0.035041645,0.00002986395],"about_ca_topic_score_codex":0.00904984,"about_ca_topic_score_gemma":0.027895704,"teacher_disagreement_score":0.01689911,"about_ca_system_score_codex":0.0036538667,"about_ca_system_score_gemma":0.01554294,"threshold_uncertainty_score":0.055875897},"labels":[],"label_agreement":null},{"id":"W4388729999","doi":"10.1186/s12915-023-01759-z","title":"The meaning of ubiquitylation of the DSL ligand Delta for the development of Drosophila","year":2023,"lang":"en","type":"article","venue":"BMC Biology","topic":"Developmental Biology and Gene Regulation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Brock University","funders":"Heinrich-Heine-Universität Düsseldorf; Deutsche Forschungsgemeinschaft","keywords":"Biology; Notch signaling pathway; Endocytic cycle; Locus (genetics); Signalling; Cell biology; Intracellular; Genetics; Allele; Ligand (biochemistry); Receptor; Signal transduction; Gene; Endocytosis","score_opus":0.026895817268781055,"score_gpt":0.2841322054717115,"score_spread":0.25723638820293043,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4388729999","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97899604,0.008735646,0.005695951,0.0003766898,0.00008240033,0.000018039842,0.0008582399,0.00007731868,0.005159676],"genre_scores_gemma":[0.9950381,0.0010144992,0.0015087414,0.00006163406,0.000012019578,0.0000086917335,0.0004458749,0.00001587429,0.0018946654],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99987936,0.00001931031,0.000017142824,0.000038104175,0.000025214065,0.000020758986],"domain_scores_gemma":[0.99983466,0.000020192347,0.000052839587,0.000027162032,0.000021575888,0.00004361202],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00016070741,0.00042002133,0.00013433071,0.00015631513,0.00020714171,0.0005562105,0.00020528349,0.0003146554,0.0017184223],"category_scores_gemma":[0.00012257168,0.00011072536,0.00018402867,0.000094728544,0.00025635937,0.00042778227,0.00029994044,0.00039362136,0.00042150257],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015044249,0.0000103525435,0.0014008693,0.00011383211,0.000007547879,0.00011365042,0.000014488396,0.00008336263,0.9943615,0.00072683877,0.000055408284,0.0029616174],"study_design_scores_gemma":[0.000012838364,0.00013457448,0.014590657,0.000020761083,0.00003558572,0.00084555853,0.00005967459,0.00093651813,0.9768018,0.00035220053,0.0062016235,0.000008201059],"about_ca_topic_score_codex":0.00020382226,"about_ca_topic_score_gemma":0.0003610687,"teacher_disagreement_score":0.0017184223,"about_ca_system_score_codex":0.00054169295,"about_ca_system_score_gemma":0.00019986782,"threshold_uncertainty_score":0.005748749},"labels":[],"label_agreement":null},{"id":"W4388812784","doi":"10.1186/s12915-023-01763-3","title":"Genome-wide expression QTL mapping reveals the highly dynamic regulatory landscape of a major wheat pathogen","year":2023,"lang":"en","type":"article","venue":"BMC Biology","topic":"Wheat and Barley Genetics and Pathology","field":"Agricultural and Biological Sciences","cited_by":12,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Institute of Genetics; Eidgenössische Technische Hochschule Zürich","keywords":"Biology; Expression quantitative trait loci; Genetics; Quantitative trait locus; Gene; Regulatory sequence; Regulation of gene expression; Single-nucleotide polymorphism; Genetic architecture; Genome; Population; Genome-wide association study; Gene regulatory network; Gene expression; Genotype","score_opus":0.02267972468664675,"score_gpt":0.22750751153449006,"score_spread":0.2048277868478433,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4388812784","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9961611,0.00018313118,0.0026054352,0.000021261558,0.0000024854871,0.000004681969,0.00079052226,0.000036929872,0.00019435943],"genre_scores_gemma":[0.9957202,0.00010207657,0.0025831063,0.000041646206,0.000004153972,0.000007836419,0.0012059296,0.00002051002,0.00031458624],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9998167,0.000015681653,0.000008331673,0.00011147293,0.000024842891,0.000023024373],"domain_scores_gemma":[0.99984133,0.000079711164,0.00004096556,0.0000128297615,0.000011356354,0.000013753199],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00022470648,0.00019233018,0.00018442725,0.00044186518,0.00012444802,0.00029639335,0.00016741458,0.00020787814,0.0008222434],"category_scores_gemma":[0.0002264143,0.00012617632,0.000222459,0.0004953508,0.00019342478,0.00009124847,0.00025427347,0.0002893503,0.000117432435],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012401582,0.000018982475,0.015154275,0.000037630634,0.00003289265,0.000046982925,0.000080525664,0.0003132274,0.97907776,0.000077388504,0.000050559043,0.0049856394],"study_design_scores_gemma":[0.000026217356,0.00014939888,0.95934254,0.0000074833983,0.00009393086,0.0003158654,0.0000862862,0.0034171485,0.035305534,0.00021450748,0.0010308139,0.00001038244],"about_ca_topic_score_codex":0.001101247,"about_ca_topic_score_gemma":0.002176145,"teacher_disagreement_score":0.001101247,"about_ca_system_score_codex":0.00016909685,"about_ca_system_score_gemma":0.00010961557,"threshold_uncertainty_score":0.0027506948},"labels":[],"label_agreement":null},{"id":"W4390061096","doi":"10.1186/s12915-023-01801-0","title":"Selection on the promoter regions plays an important role in complex traits during duck domestication","year":2023,"lang":"en","type":"article","venue":"BMC Biology","topic":"Genetic Mapping and Diversity in Plants and Animals","field":"Biochemistry, Genetics and Molecular Biology","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Ottawa","funders":"Biotechnology and Biological Sciences Research Council; China Postdoctoral Science Foundation; National Natural Science Foundation of China","keywords":"Biology; Promoter; Domestication; Gene; Genetics; Genome; Transcriptome; Genomics; Gene expression","score_opus":0.04095608601406695,"score_gpt":0.27200606903053665,"score_spread":0.2310499830164697,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4390061096","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98727757,0.001233368,0.007840519,0.000075999975,0.000018582865,0.000014778989,0.0018114471,0.00013952285,0.00158826],"genre_scores_gemma":[0.99145633,0.0004114024,0.003413205,0.000080469326,0.000011141899,0.000029512665,0.00271358,0.00008144971,0.0018028511],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9997814,0.0000187894,0.0000126195155,0.00010579733,0.00004633488,0.000035015517],"domain_scores_gemma":[0.9997818,0.000054439617,0.00007074431,0.000018131825,0.000042201926,0.000032718344],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00017417691,0.00021264817,0.00027853402,0.00030814882,0.00025453322,0.00031973628,0.00015015635,0.0001610716,0.0010229576],"category_scores_gemma":[0.00021220764,0.00012858158,0.00029885833,0.00032260563,0.00024596913,0.00019349856,0.0002930005,0.0003492619,0.00036082783],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013238318,0.000011869406,0.025560595,0.000119254626,0.00002307713,0.00019329836,0.0001437949,0.0003553201,0.9662446,0.00020531732,0.00016317157,0.006847473],"study_design_scores_gemma":[0.00001803866,0.00015736262,0.7211269,0.000062865896,0.0001378255,0.0015266391,0.00055985234,0.007003018,0.25402224,0.0005938543,0.014750561,0.000040831066],"about_ca_topic_score_codex":0.0015046383,"about_ca_topic_score_gemma":0.0030322932,"teacher_disagreement_score":0.0015046383,"about_ca_system_score_codex":0.0003473544,"about_ca_system_score_gemma":0.00024925344,"threshold_uncertainty_score":0.003422141},"labels":[],"label_agreement":null},{"id":"W4390368205","doi":"10.1186/s12915-023-01793-x","title":"Animal welfare research is fascinating, ethical, and useful—but how can it be more rigorous?","year":2023,"lang":"en","type":"letter","venue":"BMC Biology","topic":"Animal Behavior and Welfare Studies","field":"Veterinary","cited_by":10,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Rigour; Sentience; Animal welfare; Animal ethics; Engineering ethics; Biology; Construct (python library); Management science; Environmental ethics; Epistemology; Computer science; Ecology; Engineering","score_opus":0.3094596615838824,"score_gpt":0.4522140050170041,"score_spread":0.1427543434331217,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4390368205","genre_codex":"commentary","genre_gemma":"commentary","domain_codex":null,"domain_gemma":"methods","model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"commentary","genre_consensus":"commentary","domain_candidate":"methods","domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00006371032,0.0014724153,0.00014922985,0.9788209,0.018637849,0.000007253712,0.000018544088,0.000015132618,0.0008149309],"genre_scores_gemma":[0.0006668596,0.0014172462,0.0006099803,0.97387254,0.020563118,0.000031258405,0.000017670078,0.000019834384,0.0028015138],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9788815,0.0071817534,0.0028062328,0.002662558,0.007292363,0.0011756174],"domain_scores_gemma":[0.9035688,0.064740986,0.0030490165,0.0034803415,0.018076183,0.007084593],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.036969293,0.0011763637,0.0020490864,0.0012089545,0.0056942,0.007417316,0.0032552923,0.06651872,0.00727294],"category_scores_gemma":[0.10735721,0.0008717323,0.0020990237,0.0011712421,0.012619998,0.013285021,0.0034423722,0.08134039,0.011847559],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000042739182,0.000037392358,0.0002874518,0.00013039359,0.000014093618,0.0005568117,0.00020369822,0.000027154683,0.00020175081,0.0071044494,0.9769803,0.014413738],"study_design_scores_gemma":[0.000057724435,0.00006418541,0.0006813979,0.0005382092,0.000016143544,0.0010219677,0.0005724281,0.00015812734,0.00019179647,0.026548255,0.9700846,0.00006514273],"about_ca_topic_score_codex":0.006182897,"about_ca_topic_score_gemma":0.010779925,"teacher_disagreement_score":0.9630307,"about_ca_system_score_codex":0.0061094854,"about_ca_system_score_gemma":0.0101161245,"threshold_uncertainty_score":0.19551462},"labels":[],"label_agreement":null},{"id":"W4390369496","doi":"10.1186/s12915-023-01787-9","title":"Two decades taken at speed: genomics, cell biology, ecology, and evolution of protists","year":2023,"lang":"en","type":"letter","venue":"BMC Biology","topic":"Protist diversity and phylogeny","field":"Biochemistry, Genetics and Molecular Biology","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"Biology; Genomics; Evolutionary biology; Eternity; Ecology; Biological evolution; Evolutionary ecology; Conservation biology; Environmental ethics; Ecology and Evolutionary Biology; Epistemology; Genome; Genetics; Gene","score_opus":0.019864048387525028,"score_gpt":0.2518617781441288,"score_spread":0.23199772975660377,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4390369496","genre_codex":"commentary","genre_gemma":"commentary","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"commentary","genre_consensus":"commentary","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00016820457,0.0022104688,0.00014033032,0.95133364,0.045086224,0.000006311803,0.000030346535,0.000028524655,0.0009958319],"genre_scores_gemma":[0.0012699981,0.0011476814,0.0001876948,0.94704646,0.045696992,0.000020828384,0.000014349677,0.000024593424,0.004591354],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99444455,0.0016529898,0.00052987505,0.00097369484,0.0018880662,0.0005108098],"domain_scores_gemma":[0.97759765,0.01455018,0.0008265027,0.000802218,0.0033418275,0.0028815991],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.008326091,0.0012236305,0.0013351612,0.00067727297,0.005013749,0.0046539195,0.002708226,0.047412526,0.0057039326],"category_scores_gemma":[0.031541813,0.0010529221,0.0013787742,0.0005869785,0.0051688273,0.008349775,0.0024224597,0.058913406,0.008426003],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000053144933,0.000027143493,0.00017609906,0.000041603173,0.000014327617,0.0006926431,0.00013122236,0.00002811966,0.00016516728,0.0019943079,0.98744583,0.009230413],"study_design_scores_gemma":[0.00012639236,0.000069668546,0.0009776211,0.00026614364,0.000028219703,0.0014237623,0.00048497115,0.00031787102,0.00030056929,0.021149017,0.97477245,0.00008327116],"about_ca_topic_score_codex":0.007347165,"about_ca_topic_score_gemma":0.011376592,"teacher_disagreement_score":0.047412526,"about_ca_system_score_codex":0.005221617,"about_ca_system_score_gemma":0.0045884307,"threshold_uncertainty_score":0.04403317},"labels":[],"label_agreement":null},{"id":"W4392192276","doi":"10.1186/s12915-024-01849-6","title":"Membranes are functionalized by a proteolipid code","year":2024,"lang":"en","type":"article","venue":"BMC Biology","topic":"Lipid Membrane Structure and Behavior","field":"Biochemistry, Genetics and Molecular Biology","cited_by":14,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"Clarendon Fund; Natural Sciences and Engineering Research Council of Canada","keywords":"Membrane; Biology; Lipid bilayer fusion; Peripheral membrane protein; Membrane protein; Biophysics; Cell biology; Lamellipodium; Integral membrane protein; Biological membrane; Cell; Biochemistry; Cytoskeleton","score_opus":0.015762910704530727,"score_gpt":0.2761975922850449,"score_spread":0.2604346815805142,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4392192276","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.5840583,0.005877309,0.26914036,0.0034180542,0.0008232901,0.00007951603,0.0004471875,0.0018939978,0.13426201],"genre_scores_gemma":[0.9437809,0.0020459432,0.03206745,0.0005534996,0.000103535676,0.00006479813,0.00012789351,0.0001825779,0.021073457],"study_design_codex":"theoretical_or_conceptual","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997688,0.00002773759,0.000007357415,0.000040546794,0.00011208095,0.00004351061],"domain_scores_gemma":[0.9998258,0.000030846422,0.00003421442,0.000039959108,0.000034482666,0.00003475673],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001304119,0.0002447685,0.00031378484,0.00043732836,0.00093852106,0.0013791589,0.0003505014,0.0007935329,0.0023539101],"category_scores_gemma":[0.00037994247,0.00027944264,0.0002999905,0.00024465303,0.0011804265,0.0016038448,0.001032808,0.00069141993,0.0011735499],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000050109113,0.000012943785,0.00028858279,0.000069120375,0.0000118102025,0.000387503,0.00014659797,0.0031890136,0.21172915,0.775418,0.0010746808,0.007622558],"study_design_scores_gemma":[0.000046313133,0.000109312336,0.0015449914,0.00006596173,0.000032078613,0.0011720598,0.00024440256,0.041739248,0.23111215,0.61982465,0.10399658,0.000112392634],"about_ca_topic_score_codex":0.00065423973,"about_ca_topic_score_gemma":0.00049887126,"teacher_disagreement_score":0.0023539101,"about_ca_system_score_codex":0.0006301008,"about_ca_system_score_gemma":0.00033984095,"threshold_uncertainty_score":0.007874608},"labels":[],"label_agreement":null},{"id":"W4392200032","doi":"10.1186/s12915-024-01845-w","title":"Primary cilia promote the differentiation of human neurons through the WNT signaling pathway","year":2024,"lang":"en","type":"article","venue":"BMC Biology","topic":"Genetic and Kidney Cyst Diseases","field":"Biochemistry, Genetics and Molecular Biology","cited_by":25,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Artificial Intelligence in Medicine (Canada)","funders":"O. E. och Edla Johanssons Vetenskapliga Stiftelse; Sigrid Juséliuksen Säätiö; Åhlén-stiftelsen; Vetenskapsrådet; Stiftelsen för Strategisk Forskning; Fredrik och Ingrid Thurings Stiftelse; Stiftelsen Olle Engkvist Byggmästare; Novo Nordisk; Stiftelsen för Strategisk Forskning; Hjärnfonden; Japan Society for the Promotion of Science; Novo Nordisk Fonden; Svenska Sällskapet för Medicinsk Forskning; Cancerfonden; Karolinska Institutet; Torsten Söderbergs Stiftelse","keywords":"Biology; Cilium; Wnt signaling pathway; Cell biology; Signal transduction; Primary (astronomy); Cellular differentiation; Genetics; Gene","score_opus":0.01902948061064889,"score_gpt":0.2637353516518754,"score_spread":0.2447058710412265,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4392200032","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9818465,0.0059757656,0.0027049484,0.0002397886,0.00006311371,0.00007773439,0.0019746798,0.00023469186,0.006882831],"genre_scores_gemma":[0.98706853,0.0028311096,0.0020600865,0.00006472593,0.000007750068,0.000039705115,0.0012427834,0.000032531967,0.0066527845],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99988794,0.000008260016,0.000012391336,0.000018004512,0.00004377949,0.000029694047],"domain_scores_gemma":[0.99994457,0.000008329703,0.0000140414295,0.0000065071063,0.000013000388,0.000013527613],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00010817173,0.00024999218,0.00019468463,0.00021672831,0.00018434954,0.00026848077,0.000115769006,0.00021960656,0.0025717192],"category_scores_gemma":[0.000119356475,0.00013223375,0.00029176034,0.00013838163,0.00012439037,0.00009391044,0.00026587286,0.0002643616,0.000771072],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000101401914,0.000013772555,0.00047584352,0.000071695606,0.0000066664024,0.000097342585,0.000020669335,0.000039913288,0.9971528,0.00009780263,0.0001470017,0.0017750392],"study_design_scores_gemma":[0.000020655078,0.00015429808,0.016394945,0.000024557861,0.000037876038,0.0003684974,0.000041842588,0.0005443214,0.9740467,0.00006963806,0.008293292,0.0000034093928],"about_ca_topic_score_codex":0.003970863,"about_ca_topic_score_gemma":0.005665007,"teacher_disagreement_score":0.003970863,"about_ca_system_score_codex":0.00038213286,"about_ca_system_score_gemma":0.00041513823,"threshold_uncertainty_score":0.008603275},"labels":[],"label_agreement":null},{"id":"W4392804826","doi":"10.1186/s12915-024-01843-y","title":"DNA methylation haplotype block signatures responding to Staphylococcus aureus subclinical mastitis and association with production and health traits","year":2024,"lang":"en","type":"article","venue":"BMC Biology","topic":"Milk Quality and Mastitis in Dairy Cows","field":"Agricultural and Biological Sciences","cited_by":10,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Université Laval; Agriculture and Agri-Food Canada","funders":"Agriculture and Agri-Food Canada; China Scholarship Council","keywords":"DNA methylation; Biology; Methylation; Mastitis; Differentially methylated regions; Staphylococcus aureus; Somatic cell count; Gene; Genetics; Subclinical infection; Bisulfite sequencing; Gene expression; Microbiology; Lactation; Virology; Bacteria","score_opus":0.050093737899554236,"score_gpt":0.31374607657417125,"score_spread":0.263652338674617,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4392804826","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99901664,0.00021146436,0.00045759708,0.000008194531,9.767102e-7,0.0000029542346,0.00018977013,0.000004655542,0.00010779808],"genre_scores_gemma":[0.99936205,0.00005055187,0.00030329908,0.0000076166084,0.0000015284528,0.0000039239485,0.00018208698,0.0000012870431,0.000087721615],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99991024,0.000013843051,0.0000063381735,0.000035149053,0.00001706732,0.000017380256],"domain_scores_gemma":[0.9997627,0.00005886893,0.00011039272,0.0000123615055,0.000025229112,0.0000303885],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00017287114,0.00011438604,0.00015709407,0.00037728564,0.00008268658,0.00014715185,0.000075491276,0.00015882359,0.0007801232],"category_scores_gemma":[0.0003078901,0.000069828006,0.00010080508,0.00028808933,0.00011591249,0.000053723936,0.00014878399,0.0001248487,0.000078098965],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006130516,0.000023535937,0.63075435,0.00006747376,0.00012765912,0.00010058433,0.00016491857,0.00027077444,0.3589934,0.00004363735,0.00006193872,0.008778762],"study_design_scores_gemma":[0.000004598599,0.000087466586,0.9921176,0.0000030987926,0.00003362542,0.00018310727,0.0000535889,0.0006173748,0.0066910186,0.00005058838,0.00015555964,0.0000024543597],"about_ca_topic_score_codex":0.0009026655,"about_ca_topic_score_gemma":0.0014334584,"teacher_disagreement_score":0.0009026655,"about_ca_system_score_codex":0.000097438395,"about_ca_system_score_gemma":0.00007979847,"threshold_uncertainty_score":0.0026097894},"labels":[],"label_agreement":null},{"id":"W4395007478","doi":"10.1186/s12915-024-01886-1","title":"Recognition of nonself is necessary to activate Drosophila’s immune response against an insect parasite","year":2024,"lang":"en","type":"article","venue":"BMC Biology","topic":"Invertebrate Immune Response Mechanisms","field":"Immunology and Microbiology","cited_by":9,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Natural Sciences and Engineering Research Council of Canada; Natural Environment Research Council; Sight Research UK; European Molecular Biology Organization","keywords":"Biology; Immune system; Innate immune system; Insect; Immunity; Cell biology; Parasitoid; Parasite hosting; Pattern recognition receptor; Drosophila (subgenus); Acquired immune system; Pathogen-associated molecular pattern; Immunology; Host (biology); Genetics; Ecology; Gene","score_opus":0.04021786014796035,"score_gpt":0.28847819225161053,"score_spread":0.24826033210365017,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4395007478","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99488515,0.0010865867,0.0011780523,0.00007262225,0.00003004013,0.000017176262,0.00043020633,0.000076891214,0.002223375],"genre_scores_gemma":[0.9957367,0.00018297325,0.0011524893,0.00006987518,0.000008547284,0.000018062014,0.0009825064,0.000016563035,0.0018322277],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99986625,0.000014074676,0.000015001674,0.000029985054,0.00003295064,0.00004172723],"domain_scores_gemma":[0.99980384,0.00003004647,0.00005630652,0.000022558088,0.000021592185,0.00006568933],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000081503465,0.00029419377,0.00018017483,0.00016085658,0.00016613334,0.00027236436,0.00015692548,0.00028629397,0.0024761339],"category_scores_gemma":[0.00012791058,0.00011321559,0.0002230186,0.00005379407,0.00016520244,0.00023525939,0.000250397,0.0005112901,0.0007810497],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000079338366,0.000018687615,0.00083852373,0.000051369847,0.0000037274456,0.00012699509,0.000009356946,0.00001938993,0.99782515,0.00009396745,0.00006143834,0.0008720914],"study_design_scores_gemma":[0.000026227786,0.00031208515,0.053311456,0.00001637305,0.00002755643,0.00084232783,0.00009130724,0.0012560071,0.94019884,0.00012319045,0.0037862032,0.000008517003],"about_ca_topic_score_codex":0.0002799789,"about_ca_topic_score_gemma":0.0005861539,"teacher_disagreement_score":0.0024761339,"about_ca_system_score_codex":0.00028134897,"about_ca_system_score_gemma":0.00020064341,"threshold_uncertainty_score":0.008283496},"labels":[],"label_agreement":null},{"id":"W4396546111","doi":"10.1186/s12915-024-01902-4","title":"Gene gain and loss from the Asian corn borer W chromosome","year":2024,"lang":"en","type":"article","venue":"BMC Biology","topic":"Genetic and Clinical Aspects of Sex Determination and Chromosomal Abnormalities","field":"Biochemistry, Genetics and Molecular Biology","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"National Key Research and Development Program of China; Natural Sciences and Engineering Research Council of Canada; China Agricultural University","keywords":"Biology; Gene; Chromosome; Genetics; Agronomy; European corn borer; Biotechnology; PEST analysis; Botany","score_opus":0.01470963128650643,"score_gpt":0.26987860600780017,"score_spread":0.25516897472129374,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4396546111","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99274457,0.00044002483,0.0038954143,0.000026518752,0.000007794685,0.000014261999,0.0013012346,0.0001789336,0.0013913072],"genre_scores_gemma":[0.98857903,0.0003748869,0.00517358,0.00005399089,0.000004805052,0.00002473508,0.0035457616,0.000083105646,0.0021601391],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99991906,0.0000031661195,0.000005033768,0.00003350216,0.000023486176,0.00001572842],"domain_scores_gemma":[0.99990964,0.000013522188,0.000038022634,0.0000111486315,0.000012949016,0.000014707146],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0000678518,0.00027174572,0.00017553287,0.00037719193,0.00024129168,0.0003040971,0.00017531628,0.00022130918,0.0009575032],"category_scores_gemma":[0.000141942,0.00011355314,0.00033685676,0.00034849477,0.00016165567,0.00018593374,0.00033956795,0.000343691,0.00026151325],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001128556,0.000008230139,0.014455178,0.00007640009,0.000023726197,0.00022982046,0.000091246846,0.00029876808,0.9766738,0.00013275263,0.000083414176,0.007813914],"study_design_scores_gemma":[0.000021257745,0.00031776814,0.58408517,0.00003464268,0.00017171945,0.0019890117,0.00028525057,0.0032286004,0.39536706,0.00031945956,0.014147792,0.000032320226],"about_ca_topic_score_codex":0.002704558,"about_ca_topic_score_gemma":0.004849649,"teacher_disagreement_score":0.002704558,"about_ca_system_score_codex":0.00024339641,"about_ca_system_score_gemma":0.00018580932,"threshold_uncertainty_score":0.0053776503},"labels":[],"label_agreement":null},{"id":"W4398140742","doi":"10.1186/s12915-024-01916-y","title":"The mechanoreceptor Piezo is required for spermatogenesis in Bombyx mori","year":2024,"lang":"en","type":"article","venue":"BMC Biology","topic":"Neurobiology and Insect Physiology Research","field":"Neuroscience","cited_by":12,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ministry of Agriculture","funders":"Jiangsu University of Science and Technology; Natural Science Foundation of Jiangsu Province; Government of Jiangsu Province; Jiangsu University; National Natural Science Foundation of China; National Science Foundation","keywords":"Biology; Mechanoreceptor; Bombyx mori; Spermatogenesis; Cell biology; Mechanotransduction; Anatomy; Genetics; Neuroscience; Endocrinology; Gene","score_opus":0.08116046280576568,"score_gpt":0.35842987129012766,"score_spread":0.277269408484362,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4398140742","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98434216,0.004138346,0.0056701503,0.00018312679,0.00007877041,0.000035515237,0.0025139807,0.00027223272,0.002765723],"genre_scores_gemma":[0.986172,0.0018347597,0.0033441524,0.00014705525,0.000018233266,0.000049881804,0.003534621,0.000096159056,0.004803146],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.999887,0.0000048855973,0.000009385254,0.0000342266,0.000044409244,0.000019982883],"domain_scores_gemma":[0.9998702,0.000009984115,0.000060650844,0.0000071649197,0.000013992797,0.000038086535],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00007028201,0.00039493444,0.00020938978,0.00022432608,0.00035179878,0.0002958688,0.00020269917,0.00031501224,0.0014403379],"category_scores_gemma":[0.00009946154,0.0002199083,0.00031118613,0.00013030315,0.00018582419,0.00018481663,0.00043690647,0.00051847985,0.00064409035],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000035168076,0.0000047674494,0.0008623302,0.00006609383,0.000004537209,0.0001131137,0.000019014482,0.000035446643,0.99709296,0.00006741316,0.00009247404,0.0016066071],"study_design_scores_gemma":[0.000060565646,0.000162128,0.20889287,0.00008554902,0.00011177292,0.0014533524,0.0002193242,0.0030437077,0.7599447,0.00018862265,0.025801236,0.000036211644],"about_ca_topic_score_codex":0.0023274943,"about_ca_topic_score_gemma":0.0035952386,"teacher_disagreement_score":0.0023274943,"about_ca_system_score_codex":0.00032542125,"about_ca_system_score_gemma":0.00025755222,"threshold_uncertainty_score":0.0048184395},"labels":[],"label_agreement":null},{"id":"W4398279468","doi":"10.1186/s12915-024-01919-9","title":"Deep behavioural phenotyping of the Q175 Huntington disease mouse model: effects of age, sex, and weight","year":2024,"lang":"en","type":"article","venue":"BMC Biology","topic":"Genetic Neurodegenerative Diseases","field":"Neuroscience","cited_by":12,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia; University of Calgary; Vancouver Coastal Health","funders":"National Institute on Drug Abuse; Canadian Institutes of Health Research; Brain Research Foundation; National Institutes of Health; National Science Foundation","keywords":"Morris water navigation task; Habituation; Open field; Huntington's disease; Rotarod performance test; Biology; Motor learning; Disease; Lever; T-maze; Neuroscience; Barnes maze; Body weight; Physiology; Developmental psychology; Psychology; Cognition; Motor activity; Spatial learning; Medicine; Pathology; Endocrinology","score_opus":0.027675174046949774,"score_gpt":0.2707451870132372,"score_spread":0.2430700129662874,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4398279468","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97701204,0.0004528646,0.017102636,0.00011577345,0.000039419654,0.00006292351,0.003972671,0.0006824712,0.00055930193],"genre_scores_gemma":[0.95059335,0.0010405807,0.033194773,0.00023138053,0.000020799082,0.00052332313,0.008567571,0.0006032144,0.005224958],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9998361,0.000013417352,0.000015589654,0.00005937632,0.000041777614,0.000033630844],"domain_scores_gemma":[0.99960226,0.0000551709,0.0001374761,0.0000378363,0.00005753912,0.00010970129],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00031613358,0.0010993452,0.00046069987,0.0008110084,0.00018524501,0.00034150173,0.0003517076,0.00049517286,0.0013208084],"category_scores_gemma":[0.00030821492,0.00022478426,0.00059826236,0.00028586088,0.00038414518,0.00026289193,0.0003997129,0.0013566104,0.00034489314],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0004992404,0.00021675126,0.006798082,0.000078924655,0.000057001744,0.000102160935,0.000069310576,0.0017621157,0.9810482,0.00011602047,0.00029615258,0.008955971],"study_design_scores_gemma":[0.000102833066,0.0028866567,0.15216012,0.00010189337,0.0003754453,0.000680149,0.0001227307,0.028393824,0.8095205,0.0007023934,0.004844754,0.00010871327],"about_ca_topic_score_codex":0.001478371,"about_ca_topic_score_gemma":0.0029721472,"teacher_disagreement_score":0.001478371,"about_ca_system_score_codex":0.00034613413,"about_ca_system_score_gemma":0.00022578868,"threshold_uncertainty_score":0.004418552},"labels":[],"label_agreement":null},{"id":"W4399153552","doi":"10.1186/s12915-024-01929-7","title":"Extensive remodeling of sugar metabolism through gene loss and horizontal gene transfer in a eukaryotic lineage","year":2024,"lang":"en","type":"article","venue":"BMC Biology","topic":"Genomics and Phylogenetic Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Western University","funders":"Fundação para a Ciência e a Tecnologia; Applied Molecular Biosciences Unit; Ministério da Ciência, Tecnologia e Ensino Superior; Fundação de Amparo à Pesquisa do Estado de Minas Gerais; Conselho Nacional de Desenvolvimento Científico e Tecnológico","keywords":"Biology; Horizontal gene transfer; Gene; Lineage (genetic); Genetics; Gene transfer; Evolutionary biology; Cell biology; Phylogenetics","score_opus":0.019226120022628943,"score_gpt":0.2588165360483944,"score_spread":0.23959041602576545,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4399153552","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9949144,0.0005097972,0.0034225401,0.000034078865,0.0000036340805,0.000016183332,0.00036663437,0.000052845593,0.0006798842],"genre_scores_gemma":[0.99394023,0.0005370678,0.003744607,0.000059579528,0.0000073221854,0.00002123717,0.0013194397,0.00002069656,0.00034989894],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9998404,0.000015869073,0.000013066535,0.00006870077,0.000032110416,0.000029899757],"domain_scores_gemma":[0.9996207,0.000086894346,0.00012728927,0.000077721146,0.000044244705,0.00004316281],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002523414,0.00026799054,0.0002575682,0.0006216496,0.00041092376,0.000469886,0.00025338866,0.00036690544,0.00062541344],"category_scores_gemma":[0.00038686104,0.0001890693,0.00034040905,0.00081580586,0.00041541082,0.00039973768,0.0006316235,0.0004468102,0.00029590292],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00044647307,0.000086730244,0.18263786,0.00033009387,0.00012005251,0.00087330403,0.00048260772,0.0012550603,0.78684336,0.00090548606,0.00014527117,0.025873702],"study_design_scores_gemma":[0.00004608247,0.00067501306,0.8639353,0.00014302331,0.0002635478,0.0034925982,0.0011414766,0.008858215,0.106843695,0.0024141953,0.012130455,0.000056435903],"about_ca_topic_score_codex":0.0003782149,"about_ca_topic_score_gemma":0.00039804494,"teacher_disagreement_score":0.00062541344,"about_ca_system_score_codex":0.0002414553,"about_ca_system_score_gemma":0.0002119181,"threshold_uncertainty_score":0.0020921826},"labels":[],"label_agreement":null},{"id":"W4399971167","doi":"10.1186/s12915-024-01942-w","title":"Vimentin-mediated buffering of internal integrin β1 pool increases survival of cells from anoikis","year":2024,"lang":"en","type":"article","venue":"BMC Biology","topic":"Skin and Cellular Biology Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"National Research Foundation of Korea; Korea University","keywords":"Vimentin; Anoikis; Biology; Cancer research; Integrin; Cell biology; Metastasis; Epithelial–mesenchymal transition; Intermediate filament; Intermediate Filament Protein; Cancer; Cell; Cytoskeleton; Immunology; Biochemistry; Immunohistochemistry","score_opus":0.01620394396266191,"score_gpt":0.28448726757061965,"score_spread":0.26828332360795776,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4399971167","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99509984,0.0015764107,0.0018868255,0.000050245624,0.000026603555,0.000017694463,0.000084895524,0.000043139476,0.0012145146],"genre_scores_gemma":[0.99651957,0.0008102437,0.001029039,0.00002355369,0.000008222445,0.000017173694,0.00017796247,0.000007301514,0.0014070495],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999497,0.0000075110015,0.0000037263305,0.00000838298,0.000011382177,0.000019372375],"domain_scores_gemma":[0.9999484,0.000010175763,0.000013351918,0.0000052763935,0.0000074960644,0.000015259557],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000058543847,0.00022299455,0.00014875406,0.00014019775,0.00013121298,0.00018128096,0.0001108106,0.00016046914,0.0013858461],"category_scores_gemma":[0.0000739597,0.000058689624,0.00019685796,0.000078866906,0.000116622934,0.00011760792,0.00011257904,0.00027798352,0.00022899175],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00018687033,0.000036883306,0.00013531865,0.000037371603,0.000004394333,0.000032931264,0.000011560787,0.0000357797,0.9982133,0.000052396754,0.000041499716,0.00121177],"study_design_scores_gemma":[0.000013679281,0.000489755,0.0034178658,0.000005399454,0.00001795794,0.00012990106,0.000021576816,0.0004976519,0.99413,0.000028723922,0.0012451523,0.000002323712],"about_ca_topic_score_codex":0.00034898584,"about_ca_topic_score_gemma":0.0005689614,"teacher_disagreement_score":0.0013858461,"about_ca_system_score_codex":0.00017528184,"about_ca_system_score_gemma":0.000112689326,"threshold_uncertainty_score":0.004636109},"labels":[],"label_agreement":null},{"id":"W4401082749","doi":"10.1186/s12915-024-01952-8","title":"Keratinocytes drive the epithelial hyperplasia key to sea lice resistance in coho salmon","year":2024,"lang":"en","type":"article","venue":"BMC Biology","topic":"Parasite Biology and Host Interactions","field":"Environmental Science","cited_by":11,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Prince Edward Island","funders":"Biotechnology and Biological Sciences Research Council; Natural Sciences and Engineering Research Council of Canada; Fiskeri - og havbruksnæringens forskningsfond","keywords":"Lepeophtheirus; Biology; Salmo; Zoology; Parasite hosting; Louse; Oncorhynchus; Aquaculture; Fishery; Ecology; Fish <Actinopterygii>","score_opus":0.01570863483645511,"score_gpt":0.3227627698975084,"score_spread":0.3070541350610533,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4401082749","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9988944,0.00021175064,0.00021958441,0.000036177826,0.000007057298,0.000014640294,0.000107119115,0.000009443412,0.0004998426],"genre_scores_gemma":[0.9980469,0.00018822502,0.00024255554,0.00005289562,0.0000037096397,0.000023338609,0.00014857386,0.0000039405277,0.0012898949],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999064,0.000011045613,0.0000074058503,0.000017657188,0.000023555594,0.00003387596],"domain_scores_gemma":[0.99988866,0.000008923074,0.000028234797,0.000009066221,0.000031872187,0.000033205833],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00008999709,0.00015698445,0.00011294688,0.000119402124,0.00025007874,0.00029123842,0.00007521851,0.00020682161,0.0016113037],"category_scores_gemma":[0.00012277687,0.000087470384,0.00017109305,0.00007115993,0.00023632366,0.00015508836,0.00028778487,0.0003588675,0.00030255603],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001220421,0.000025423597,0.0059718546,0.000049424627,0.0000038445733,0.000055031305,0.000074732234,0.000026514605,0.992753,0.000017837583,0.00004626889,0.0008540645],"study_design_scores_gemma":[0.000031988853,0.0014346167,0.54067373,0.000047853955,0.00005223125,0.0005023435,0.0032326581,0.00087718864,0.4501193,0.00012412193,0.0028850778,0.000018935314],"about_ca_topic_score_codex":0.0014936058,"about_ca_topic_score_gemma":0.0034770358,"teacher_disagreement_score":0.0016113037,"about_ca_system_score_codex":0.0002190831,"about_ca_system_score_gemma":0.00027173848,"threshold_uncertainty_score":0.0053902864},"labels":[],"label_agreement":null},{"id":"W4402464096","doi":"10.1186/s12915-024-02007-8","title":"FgCWM1 modulates TaNDUFA9 to inhibit SA synthesis and reduce FHB resistance in wheat","year":2024,"lang":"en","type":"article","venue":"BMC Biology","topic":"Mycotoxins in Agriculture and Food","field":"Agricultural and Biological Sciences","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"University of California, Davis; Chinese Academy of Sciences; Institute of Genetics; National Natural Science Foundation of China","keywords":"Biology; Fusarium; Mutant; Salicylic acid; Chloroplast; Yeast; Cytoplasm; Subcellular localization; Plant disease resistance; Cell wall; Protein subunit; Cell biology; Biochemistry; Botany; Gene","score_opus":0.023054118479319267,"score_gpt":0.24197138184874847,"score_spread":0.2189172633694292,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4402464096","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99637055,0.0009324889,0.0015546234,0.00009779872,0.00003927306,0.000026472992,0.0004537475,0.00009788989,0.00042717278],"genre_scores_gemma":[0.9967583,0.00030759783,0.0011888626,0.00006788664,0.000006812482,0.000029953548,0.00052427023,0.000017917218,0.0010984293],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999207,0.000010803096,0.000009707578,0.000020034719,0.00001931691,0.000019489744],"domain_scores_gemma":[0.9999298,0.000009608505,0.00002632684,0.000005282433,0.0000066301814,0.000022317787],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00010225372,0.00032541007,0.00030515454,0.0001497547,0.00018642955,0.00018503492,0.00026250124,0.0003057215,0.0011674021],"category_scores_gemma":[0.00010600954,0.00009609353,0.00024197706,0.00012613375,0.00017612017,0.0001147494,0.00017222487,0.00033824277,0.00030189214],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013983354,0.000031880703,0.00018977521,0.000034879995,0.000003888853,0.00003133563,0.0000087949375,0.000024607933,0.99874806,0.000024866798,0.00004034898,0.00072169775],"study_design_scores_gemma":[0.000059551192,0.0003819769,0.011773018,0.000010188192,0.00003876789,0.00019863009,0.000045504687,0.0020919503,0.98232883,0.000042879743,0.003021061,0.000007587767],"about_ca_topic_score_codex":0.00061165274,"about_ca_topic_score_gemma":0.0008892844,"teacher_disagreement_score":0.0011674021,"about_ca_system_score_codex":0.00033599464,"about_ca_system_score_gemma":0.0001251598,"threshold_uncertainty_score":0.0039054155},"labels":[],"label_agreement":null},{"id":"W4403288889","doi":"10.1186/s12915-024-02033-6","title":"Ecological adaptations of amphibians to environmental changes along an altitudinal gradient (Case Study: Bufo gargarizans) from phenotypic and genetic perspectives","year":2024,"lang":"en","type":"article","venue":"BMC Biology","topic":"Physiological and biochemical adaptations","field":"Environmental Science","cited_by":14,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Carleton University","funders":"National Natural Science Foundation of China","keywords":"Biology; Ecology; Phenotype; Phenotypic plasticity; Adaptation (eye); Bufo; Amphibian; Zoology; Evolutionary biology; Genetics; Toad; Gene","score_opus":0.03362016090611997,"score_gpt":0.26499188358315545,"score_spread":0.23137172267703549,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4403288889","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99968266,0.00006002355,0.00006540646,0.000010042245,4.9077516e-7,0.000002560351,0.000033486125,0.0000022191552,0.00014317388],"genre_scores_gemma":[0.99946254,0.00006591569,0.00032062316,0.000008866926,0.0000023767275,0.000006033867,0.00004546679,9.592752e-7,0.000087180146],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99993014,0.000012055448,0.0000025288684,0.000025198613,0.000008612288,0.000021526317],"domain_scores_gemma":[0.99992406,0.000008270608,0.00003973767,0.000004005963,0.0000085949,0.000015421354],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009447559,0.00026998628,0.00015694584,0.0007381672,0.0005708772,0.0002436446,0.00016672559,0.0002732591,0.00076125655],"category_scores_gemma":[0.00010870508,0.00007512897,0.00013685915,0.00045552492,0.0004721165,0.0001988884,0.00019985944,0.00019695277,0.000052706637],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002546962,0.00018593814,0.8344906,0.000122721,0.00007689358,0.0018163049,0.0021872013,0.00065950956,0.14291355,0.00033308085,0.00019839902,0.016761154],"study_design_scores_gemma":[0.0000018095428,0.00013733261,0.9971228,0.000004424479,0.000021375914,0.000640468,0.0007320874,0.00019135837,0.00081442524,0.000042299456,0.00028721965,0.000004372035],"about_ca_topic_score_codex":0.0052631586,"about_ca_topic_score_gemma":0.016360313,"teacher_disagreement_score":0.0052631586,"about_ca_system_score_codex":0.00035612733,"about_ca_system_score_gemma":0.00011017453,"threshold_uncertainty_score":0.010465026},"labels":[],"label_agreement":null},{"id":"W4403682524","doi":"10.1186/s12915-024-02035-4","title":"Seasonal stability of the rumen microbiome contributes to the adaptation patterns to extreme environmental conditions in grazing yak and cattle","year":2024,"lang":"en","type":"article","venue":"BMC Biology","topic":"Ruminant Nutrition and Digestive Physiology","field":"Agricultural and Biological Sciences","cited_by":23,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia; University of Alberta","funders":"Natural Sciences and Engineering Research Council of Canada; China Scholarship Council; Compute Canada; National Natural Science Foundation of China; Alberta Agriculture and Forestry; University of Washington","keywords":"Biology; YAK; Grazing; Microbiome; Rumen; Adaptation (eye); Cattle grazing; Extreme environment; Ecology; Animal science; Bacteria; Genetics; Food science","score_opus":0.03837302117599757,"score_gpt":0.23958411489425496,"score_spread":0.2012110937182574,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4403682524","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99951625,0.0001506594,0.00008819008,0.000010497934,0.000002221314,0.0000021566084,0.00014539293,0.0000016535466,0.000082912986],"genre_scores_gemma":[0.99914765,0.0001036122,0.00019625554,0.000018333905,0.0000036706047,0.0000080680375,0.00035304745,0.0000032220191,0.00016601106],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9998053,0.000037280864,0.000013084006,0.000064510416,0.000021749449,0.000058099507],"domain_scores_gemma":[0.9996711,0.000034484958,0.0001519577,0.000020385924,0.000044565102,0.00007755233],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003163449,0.00024218619,0.00041181454,0.00045357857,0.00054328656,0.0006427161,0.00016295162,0.00027690324,0.0009260103],"category_scores_gemma":[0.00040282722,0.00019864526,0.00028984068,0.00055515446,0.00039794913,0.0002895184,0.00034645654,0.0003079127,0.00012692122],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0011158156,0.0000847573,0.88314563,0.000101049,0.00016903733,0.000191667,0.00081928493,0.00014287043,0.108447455,0.000049011116,0.00012285772,0.005610684],"study_design_scores_gemma":[0.0000011263055,0.000035917514,0.99926966,0.0000029397204,0.000010978654,0.000043297576,0.000252662,0.00006964014,0.00024170804,0.000010683899,0.000059056394,0.0000023157809],"about_ca_topic_score_codex":0.005522329,"about_ca_topic_score_gemma":0.010825712,"teacher_disagreement_score":0.005522329,"about_ca_system_score_codex":0.00044669397,"about_ca_system_score_gemma":0.00028954295,"threshold_uncertainty_score":0.010980368},"labels":[],"label_agreement":null},{"id":"W4403819983","doi":"10.1186/s12915-024-02051-4","title":"Evolutionary divergent clusters of transcribed extinct truncated retroposons drive low mRNA expression and developmental regulation in the protozoan Leishmania","year":2024,"lang":"en","type":"article","venue":"BMC Biology","topic":"Trypanosoma species research and implications","field":"Medicine","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Centre Hospitalier Universitaire Sainte-Justine; Université Laval; Université de Montréal; Centre hospitalier universitaire de Québec","funders":"Canadian Institutes of Health Research; Université Laval","keywords":"Retroposon; Biology; Genetics; Genome; Gene; Subfamily; Evolutionary biology; Transposable element","score_opus":0.02897797879563851,"score_gpt":0.29977370881735904,"score_spread":0.2707957300217205,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4403819983","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9971469,0.00035851658,0.0014981849,0.000027011236,0.0000040557893,0.000009773861,0.0003336771,0.000068595924,0.00055317587],"genre_scores_gemma":[0.9956168,0.00016484076,0.0022600444,0.000062889354,0.000005474617,0.000018493898,0.0010850944,0.000036080615,0.00075016066],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998996,0.0000069512625,0.0000052875007,0.00003979723,0.00002909518,0.000019275558],"domain_scores_gemma":[0.9998535,0.00003055313,0.00004835975,0.000017967339,0.000018053788,0.000031542448],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00007804908,0.00018858461,0.00017061604,0.00022833288,0.00013577339,0.00031143543,0.00014930173,0.00021383453,0.0006932631],"category_scores_gemma":[0.00015451874,0.00014735291,0.00020211596,0.00017247564,0.00022563395,0.00009545004,0.00025044332,0.0004033406,0.0003831241],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000068802015,0.000010237984,0.0018647892,0.000031054027,0.0000058438554,0.0000680887,0.000025650048,0.00010777169,0.996619,0.00008448761,0.000020962467,0.0010934068],"study_design_scores_gemma":[0.000047726626,0.0007406811,0.22145903,0.000029491872,0.000096752534,0.0020903698,0.00038585436,0.008697258,0.7606357,0.00060471194,0.005184025,0.00002844321],"about_ca_topic_score_codex":0.00023137162,"about_ca_topic_score_gemma":0.0005265077,"teacher_disagreement_score":0.0006932631,"about_ca_system_score_codex":0.0002520891,"about_ca_system_score_gemma":0.00013961676,"threshold_uncertainty_score":0.0023192167},"labels":[],"label_agreement":null},{"id":"W4406668301","doi":"10.1186/s12915-025-02121-1","title":"Genome sequences of four Ixodes species expands understanding of tick evolution","year":2025,"lang":"en","type":"article","venue":"BMC Biology","topic":"Vector-borne infectious diseases","field":"Immunology and Microbiology","cited_by":20,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"Grantová Agentura České Republiky; Institut National de Recherche pour l'Agriculture, l'Alimentation et l'Environnement; Commissariat à l'Énergie Atomique et aux Énergies Alternatives; Agence Nationale de la Recherche","keywords":"Biology; Genome; Ixodes; Tick; Evolutionary biology; Ixodes scapularis; Tick-borne disease; Genetics; Zoology; Ixodidae; Ecology; Gene","score_opus":0.05068786723099789,"score_gpt":0.2738997380917481,"score_spread":0.22321187086075023,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4406668301","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9022172,0.008257202,0.008475884,0.00040466484,0.00010006614,0.000105468185,0.07403941,0.0005806476,0.005819618],"genre_scores_gemma":[0.6422978,0.007100698,0.05212103,0.00029714275,0.00009864388,0.00018918858,0.294633,0.00029998893,0.002962505],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997181,0.000034825247,0.000033202134,0.00011282832,0.00005911857,0.000041860978],"domain_scores_gemma":[0.99954814,0.00011617328,0.00012792523,0.000050139497,0.00009448992,0.000063047795],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00042174832,0.0007573113,0.00041389334,0.0023867893,0.00054183544,0.0009074529,0.00031589135,0.00054647727,0.002912552],"category_scores_gemma":[0.0007366037,0.00024180456,0.0006534461,0.0022698229,0.00022891097,0.00042602283,0.0006690459,0.00076658383,0.001076834],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0020140647,0.00023076912,0.07309051,0.0031940416,0.0005269201,0.0008546699,0.0012802248,0.0034450232,0.8110848,0.0014332164,0.004627578,0.09821813],"study_design_scores_gemma":[0.00016295719,0.0007055972,0.6951422,0.000704027,0.0013888683,0.0033419286,0.0011402101,0.005008306,0.07524484,0.0024999855,0.21456712,0.00009400528],"about_ca_topic_score_codex":0.001259417,"about_ca_topic_score_gemma":0.0019001892,"teacher_disagreement_score":0.002912552,"about_ca_system_score_codex":0.0004757926,"about_ca_system_score_gemma":0.0006590114,"threshold_uncertainty_score":0.009743452},"labels":[],"label_agreement":null},{"id":"W4406668313","doi":"10.1186/s12915-025-02118-w","title":"Co-isolation of human donor eye cells and development of oncogene-mutated melanocytes to study uveal melanoma","year":2025,"lang":"en","type":"article","venue":"BMC Biology","topic":"Ocular Oncology and Treatments","field":"Medicine","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval; Institute for Research in Immunology and Cancer; McGill University; Université de Montréal; McGill University Health Centre","funders":"Fonds de Recherche du Québec - Santé; Natural Sciences and Engineering Research Council of Canada; Mitacs; McGill University Health Centre; Fondation des Maladies de l'Oeil; Université Laval","keywords":"Biology; Melanoma; Melanocyte; Oncogene; Cancer research; Isolation (microbiology); Melanin; Cell biology; Genetics; Cell; Bioinformatics; Cell cycle","score_opus":0.03055985080657497,"score_gpt":0.3608979276779033,"score_spread":0.3303380768713283,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4406668313","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9336791,0.003962318,0.04929891,0.00015740641,0.0001985455,0.00089234783,0.0017244169,0.00037575033,0.009711156],"genre_scores_gemma":[0.9413627,0.0020634725,0.042669546,0.00017825155,0.000035686568,0.000846344,0.0035924283,0.00014505851,0.009106473],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99946207,0.00007371122,0.00006497906,0.00013878073,0.0001912739,0.00006922852],"domain_scores_gemma":[0.999731,0.0000525904,0.000030369343,0.000078164136,0.00006725291,0.000040650106],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005874369,0.00031085493,0.000361338,0.0004587323,0.00030084027,0.0003921522,0.00024358305,0.00035902654,0.0016844864],"category_scores_gemma":[0.00030657728,0.00014634307,0.0003689254,0.00027957375,0.00017348623,0.00021082775,0.00048658112,0.00061703124,0.0010529296],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006743129,0.000052053616,0.0008081679,0.0000665284,0.000009477615,0.00015891853,0.00009888823,0.00006603421,0.9955479,0.00019403445,0.00014956518,0.002781086],"study_design_scores_gemma":[0.000014762233,0.0003677401,0.0061147977,0.000024657784,0.000037054673,0.0008759088,0.00008412298,0.0011274546,0.9798463,0.000058228175,0.0114382105,0.0000108388185],"about_ca_topic_score_codex":0.0009083053,"about_ca_topic_score_gemma":0.001844841,"teacher_disagreement_score":0.0016844864,"about_ca_system_score_codex":0.00023506318,"about_ca_system_score_gemma":0.0002639853,"threshold_uncertainty_score":0.0056351423},"labels":[],"label_agreement":null},{"id":"W4407093825","doi":"10.1186/s12915-025-02134-w","title":"Poor hypotheses and research waste in biology: learning from a theory crisis in psychology","year":2025,"lang":"en","type":"review","venue":"BMC Biology","topic":"Philosophy and History of Science","field":"Arts and Humanities","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"Australian Research Council; Okinawa Institute of Science and Technology Graduate University; Canada Excellence Research Chairs, Government of Canada","keywords":"Biology; Diversity (politics); Epistemology; Equity (law); Positive economics; Sociology; Economics; Law","score_opus":0.349745468669365,"score_gpt":0.443508257948911,"score_spread":0.09376278927954601,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4407093825","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":"methods","model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":"methods","domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00016607264,0.9904867,0.0008563983,0.007459047,0.00027803288,0.0000049376376,0.0000052307655,0.000008681053,0.00073484844],"genre_scores_gemma":[0.0053184167,0.98687136,0.0016723949,0.0052156644,0.00058452284,0.000022536975,0.00001710629,0.000011664575,0.00028626],"study_design_codex":"design_other","study_design_gemma":"theoretical_or_conceptual","domain_scores_codex":[0.99057126,0.005840105,0.000732871,0.00060836104,0.0020446114,0.00020285732],"domain_scores_gemma":[0.93348384,0.05811866,0.002339492,0.0014717333,0.0038606147,0.000725663],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.02282128,0.0008821797,0.0018851722,0.006346883,0.0012217759,0.00467277,0.0024459218,0.0050478633,0.0022342168],"category_scores_gemma":[0.03796587,0.0007046954,0.0010829783,0.006201891,0.009119823,0.011545692,0.0036329252,0.0062980317,0.00092759926],"study_design_candidate":"theoretical_or_conceptual","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00005990661,0.000043321837,0.00070614135,0.043330096,0.00048022167,0.00033439236,0.001928438,0.00060629164,0.00042308646,0.09925951,0.02723449,0.8255942],"study_design_scores_gemma":[0.000043121985,0.00011109968,0.0022989686,0.08167228,0.0006431683,0.0014948457,0.0024343948,0.00041396098,0.00065685646,0.18606403,0.7240691,0.000098191376],"about_ca_topic_score_codex":0.0025665383,"about_ca_topic_score_gemma":0.0062703155,"teacher_disagreement_score":0.9771787,"about_ca_system_score_codex":0.0037046685,"about_ca_system_score_gemma":0.008500907,"threshold_uncertainty_score":0.120691895},"labels":[],"label_agreement":null},{"id":"W4407194079","doi":"10.1186/s12915-024-02101-x","title":"Same data, different analysts: variation in effect sizes due to analytical decisions in ecology and evolutionary biology","year":2025,"lang":"en","type":"article","venue":"BMC Biology","topic":"Species Distribution and Climate Change","field":"Environmental Science","cited_by":50,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Regina; Trent University; University of Toronto; Université du Québec en Abitibi-Témiscamingue; University of Waterloo; Memorial University of Newfoundland; Wilfrid Laurier University; McGill University; Université du Québec à Trois-Rivières; Université du Québec à Montréal; McMaster University; University of Saskatchewan; Université de Montréal; University of Alberta; University of Guelph","funders":"","keywords":"Biology; Variation (astronomy); Ecology; Evolutionary biology; Evolutionary ecology","score_opus":0.03426726105783547,"score_gpt":0.3193996167979183,"score_spread":0.28513235574008283,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4407194079","genre_codex":"methods","genre_gemma":"empirical","domain_codex":"methods","domain_gemma":"methods","model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":"methods","domain_consensus":"methods","prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.19564615,0.059950054,0.6928318,0.017962823,0.004916081,0.006189415,0.0074314685,0.0024617107,0.012610521],"genre_scores_gemma":[0.68304557,0.0025775714,0.29375985,0.008131662,0.0007165498,0.0076109064,0.0021292088,0.0012435042,0.00078516104],"study_design_codex":"design_other","study_design_gemma":"simulation_or_modeling","domain_scores_codex":[0.3307629,0.54600936,0.041930173,0.049927145,0.029934024,0.0014364329],"domain_scores_gemma":[0.13400894,0.78127927,0.022016207,0.0532673,0.008374997,0.0010532432],"candidate_categories":["metaresearch"],"consensus_categories":["metaresearch"],"category_scores_codex":[0.45025268,0.0021673713,0.004573762,0.0064167376,0.0016397233,0.007066906,0.004825589,0.003245203,0.0029478243],"category_scores_gemma":[0.73269653,0.0021749197,0.010816718,0.007883816,0.007120171,0.006989017,0.005446903,0.004482727,0.0006521962],"study_design_candidate":"simulation_or_modeling","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.008582649,0.00039088872,0.31569833,0.030743103,0.16647191,0.0015262722,0.02946708,0.0070680366,0.010781297,0.053166952,0.026566632,0.34953687],"study_design_scores_gemma":[0.007594793,0.0029462732,0.37100106,0.013100062,0.094363295,0.002652287,0.009315289,0.027364634,0.014821933,0.3589361,0.096412666,0.0014915821],"about_ca_topic_score_codex":0.0029086124,"about_ca_topic_score_gemma":0.0029120052,"teacher_disagreement_score":0.54974735,"about_ca_system_score_codex":0.0017336253,"about_ca_system_score_gemma":0.002347918,"threshold_uncertainty_score":0.6779363},"labels":[],"label_agreement":null},{"id":"W4407568883","doi":"10.1186/s12915-025-02144-8","title":"Anemonefish use sialic acid metabolism as Trojan horse to avoid giant sea anemone stinging","year":2025,"lang":"en","type":"article","venue":"BMC Biology","topic":"Marine Invertebrate Physiology and Ecology","field":"Earth and Planetary Sciences","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Canadian Glycomics Network; Okinawa Institute of Science and Technology Graduate University; Ministry of Education, Culture, Sports, Science and Technology","keywords":"Anemone; Sea anemone; Biology; Sialic acid; Cnidocyte; Nematocyst; Coelenterata; Mucus; Cnidaria; Symbiosis; Zoology; Leech; Ecology; Host (biology); Coral; Bacteria; Biochemistry; Genetics","score_opus":0.018877027430304085,"score_gpt":0.24379188242869004,"score_spread":0.22491485499838595,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4407568883","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99752396,0.0003283772,0.0005338879,0.0000593807,0.000009618169,0.000009369238,0.000045569333,0.000018443749,0.0014712833],"genre_scores_gemma":[0.99528164,0.00024130473,0.0013802152,0.00006366035,0.000003608882,0.000009414516,0.00010606979,0.000005834806,0.0029082904],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9999554,0.0000049043947,0.0000035578735,0.0000142381605,0.0000090173635,0.000012805627],"domain_scores_gemma":[0.9998388,0.000009734743,0.000045734625,0.000013313,0.000036926074,0.000055363445],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000097301534,0.00026905324,0.00016045522,0.00020575104,0.00030676613,0.0002970579,0.00014807463,0.00036982365,0.0018165722],"category_scores_gemma":[0.00020225167,0.00011445304,0.00020849926,0.00008388581,0.00020947286,0.00027700118,0.0004576609,0.00027051862,0.00031533107],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00016296195,0.000037418955,0.052556496,0.00018899608,0.000027370523,0.00018920112,0.00027346247,0.00013530004,0.9386247,0.0001715929,0.00015428485,0.0074782195],"study_design_scores_gemma":[0.00003957912,0.0016473735,0.8352,0.00007384206,0.00014724568,0.00095879356,0.0018925274,0.0018618916,0.15131383,0.0005615194,0.0062653734,0.000038031445],"about_ca_topic_score_codex":0.0018841773,"about_ca_topic_score_gemma":0.004699915,"teacher_disagreement_score":0.0018841773,"about_ca_system_score_codex":0.00021490884,"about_ca_system_score_gemma":0.0003108795,"threshold_uncertainty_score":0.006077051},"labels":[],"label_agreement":null},{"id":"W4408140096","doi":"10.1186/s12915-025-02176-0","title":"The interplay between epigenomic and transcriptomic variation during ecotype divergence in stickleback","year":2025,"lang":"en","type":"article","venue":"BMC Biology","topic":"Epigenetics and DNA Methylation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"Academy of Finland; National Natural Science Foundation of China","keywords":"Ecotype; Biology; Epigenomics; Transcriptome; Evolutionary biology; Genetics; Gene; Local adaptation; DNA methylation; Adaptation (eye); Alternative splicing; Gene expression; Exon; Population","score_opus":0.008271331023620085,"score_gpt":0.28519740253238146,"score_spread":0.27692607150876136,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4408140096","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9976914,0.0003917813,0.00079573947,0.00001509622,0.0000037408406,0.0000031987888,0.0007770516,0.000012639422,0.0003094471],"genre_scores_gemma":[0.99773586,0.00013399996,0.0006118999,0.0000481229,0.0000059726876,0.0000112588,0.0010338675,0.000010634701,0.00040840814],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9998708,0.000013679121,0.0000063451566,0.000067584086,0.000021824762,0.000019845764],"domain_scores_gemma":[0.99972004,0.00006595744,0.000121847435,0.000018658593,0.000043354903,0.00003012354],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015965871,0.00012918709,0.0001888385,0.0004891871,0.00016060538,0.00033448325,0.00012837956,0.00022251945,0.000847796],"category_scores_gemma":[0.00026505892,0.00010726688,0.00015059454,0.0004115802,0.00022816204,0.00018905866,0.00031034558,0.00022076312,0.00013330657],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002667649,0.000015107366,0.23214914,0.00012750774,0.00014042287,0.00011736452,0.0004706554,0.00030357068,0.7589261,0.00014261734,0.0001285035,0.007212289],"study_design_scores_gemma":[9.890516e-7,0.000023061968,0.99624074,0.0000033929837,0.000017826842,0.000049731785,0.00009085132,0.0002258719,0.0030592412,0.000055209526,0.00022992147,0.000003228127],"about_ca_topic_score_codex":0.0014205993,"about_ca_topic_score_gemma":0.0031639736,"teacher_disagreement_score":0.0014205993,"about_ca_system_score_codex":0.0001628842,"about_ca_system_score_gemma":0.00011030635,"threshold_uncertainty_score":0.0028361082},"labels":[],"label_agreement":null},{"id":"W4409855423","doi":"10.1186/s12915-025-02179-x","title":"Recombination and transposition drive genomic structural variation potentially impacting life history traits in a host-generalist fungal plant pathogen","year":2025,"lang":"en","type":"article","venue":"BMC Biology","topic":"Plant pathogens and resistance mechanisms","field":"Agricultural and Biological Sciences","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Agriculture and Agri-Food Canada; McGill University; Ste. Anne's Hospital","funders":"Erasmus+; Government of Western Australia; Grains Research and Development Corporation; Università degli Studi di Perugia; Australian Government","keywords":"Biology; Genetics; Homologous recombination; Transposable element; Genome; Evolutionary biology; Gene","score_opus":0.01669880565518938,"score_gpt":0.20115665001532418,"score_spread":0.1844578443601348,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4409855423","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99455357,0.0002009513,0.004106565,0.000016132197,0.0000021419773,0.000007732492,0.00064771064,0.00007811999,0.00038712422],"genre_scores_gemma":[0.9941855,0.00010301939,0.0041399407,0.00002536194,0.0000022509573,0.000009197812,0.0013618761,0.00002614736,0.00014677826],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9996045,0.00006159992,0.00003151231,0.00016089522,0.00009404376,0.000047577458],"domain_scores_gemma":[0.9991534,0.00037592673,0.00026333093,0.00008568244,0.000050161823,0.000071550494],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004984725,0.0003399654,0.00020440652,0.00071446097,0.00018440561,0.00048768902,0.00020272139,0.00033421072,0.0010461255],"category_scores_gemma":[0.0010035498,0.00016277318,0.00042093702,0.00067260215,0.0002491489,0.00024634556,0.0003801329,0.00038480808,0.00015288462],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00032584497,0.00007444634,0.12906845,0.0001583494,0.00017706172,0.0001162949,0.00012904605,0.0026406157,0.8506274,0.0003857111,0.000104707986,0.01619203],"study_design_scores_gemma":[0.000026311054,0.0006937413,0.82496065,0.000032565724,0.00036996146,0.0010799415,0.00023536196,0.017726958,0.15162972,0.00077513204,0.0024303552,0.00003935364],"about_ca_topic_score_codex":0.0011560076,"about_ca_topic_score_gemma":0.002594132,"teacher_disagreement_score":0.0011560076,"about_ca_system_score_codex":0.00031228695,"about_ca_system_score_gemma":0.00025559403,"threshold_uncertainty_score":0.003499627},"labels":[],"label_agreement":null},{"id":"W4409855473","doi":"10.1186/s12915-025-02196-w","title":"Transcriptomic characterization of transitioning cell types in the skin of Atlantic salmon","year":2025,"lang":"en","type":"article","venue":"BMC Biology","topic":"Mesenchymal stem cell research","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Prince Edward Island","funders":"Biotechnology and Biological Sciences Research Council; Natural Sciences and Engineering Research Council of Canada; Xunta de Galicia; Axencia Galega de Innovación; Mitsubishi Electric Research Laboratories","keywords":"Biology; Transcriptome; Computational biology; Evolutionary biology; Cell biology; Fishery; Zoology; Gene; Genetics; Gene expression","score_opus":0.02313635476351315,"score_gpt":0.3041635379463842,"score_spread":0.281027183182871,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4409855473","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98981994,0.0012629316,0.0027460088,0.000043850825,0.00001539717,0.00003111465,0.0050449306,0.000032565233,0.0010033038],"genre_scores_gemma":[0.9771218,0.0012172408,0.006509334,0.00016717655,0.00001819763,0.00016772222,0.010353353,0.000057429086,0.004387926],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9998859,0.0000056890412,0.000008045191,0.00004659062,0.000032196385,0.00002165021],"domain_scores_gemma":[0.9998579,0.000024626352,0.00003837398,0.0000087651,0.00004894248,0.000021309099],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000101874924,0.00018430103,0.00023312231,0.00047073868,0.00023403269,0.00031919964,0.000089052555,0.0002259599,0.0010049485],"category_scores_gemma":[0.0001960912,0.00012693249,0.00026895193,0.00048376792,0.00020855355,0.00014335538,0.00029107937,0.00023327617,0.00036121072],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000103088474,0.0000058540154,0.01017952,0.000087202665,0.000010430607,0.000053931442,0.00010934327,0.000052306106,0.9866217,0.000024439094,0.000051316238,0.0027008716],"study_design_scores_gemma":[0.000015953465,0.0005037259,0.7957177,0.00006010293,0.00014119578,0.0007253961,0.0012013275,0.001527916,0.19260748,0.00017254456,0.0072896103,0.000037145554],"about_ca_topic_score_codex":0.0015230493,"about_ca_topic_score_gemma":0.0039285813,"teacher_disagreement_score":0.0015230493,"about_ca_system_score_codex":0.00014377799,"about_ca_system_score_gemma":0.00028174758,"threshold_uncertainty_score":0.0033618212},"labels":[],"label_agreement":null},{"id":"W4410232227","doi":"10.1186/s12915-025-02228-5","title":"Two independent regulatory mechanisms synergistically contribute to P450-mediated insecticide resistance in a lepidopteran pest, Spodoptera exigua","year":2025,"lang":"en","type":"article","venue":"BMC Biology","topic":"Insect Resistance and Genetics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":13,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ministry of Agriculture","funders":"Government of Jiangsu Province; Natural Science Foundation of Jiangsu Province; National Natural Science Foundation of China","keywords":"Spodoptera; Biology; Exigua; Insecticide resistance; PEST analysis; Integrated pest management; Toxicology; Botany; Ecology; Genetics; Gene; Recombinant DNA","score_opus":0.00803095496734414,"score_gpt":0.26685121378879867,"score_spread":0.25882025882145454,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4410232227","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9914597,0.001728869,0.0045891623,0.00015554503,0.000024945228,0.000057715726,0.00024362576,0.00019002474,0.0015502825],"genre_scores_gemma":[0.9931466,0.0005242913,0.0036997173,0.00006798672,0.000011925095,0.00007813218,0.0003088046,0.000024196095,0.002138269],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997514,0.000036975525,0.00001440682,0.00007460889,0.00006918209,0.00005346579],"domain_scores_gemma":[0.99984884,0.000026537933,0.00005164746,0.000013834045,0.000023929795,0.000035159228],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00018516941,0.00093807717,0.00040436274,0.00025226967,0.00018197126,0.00029283995,0.00022420891,0.0003358046,0.0011284244],"category_scores_gemma":[0.00012645734,0.0002472845,0.00034047253,0.00010549122,0.00022458418,0.00019750246,0.00053669955,0.0005702108,0.0003591065],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000059303457,0.00001911166,0.00069231575,0.000029063865,0.000005195501,0.000047808884,0.000007908176,0.000029445102,0.99815685,0.000031892232,0.000032001488,0.0008890362],"study_design_scores_gemma":[0.000045232347,0.0004764332,0.06587951,0.000017867396,0.00009820005,0.000996985,0.000064515996,0.0037355325,0.92531145,0.0001486462,0.0032070104,0.000018591416],"about_ca_topic_score_codex":0.00030619669,"about_ca_topic_score_gemma":0.0006051427,"teacher_disagreement_score":0.0011284244,"about_ca_system_score_codex":0.00027434636,"about_ca_system_score_gemma":0.00015209203,"threshold_uncertainty_score":0.0037750006},"labels":[],"label_agreement":null},{"id":"W4411137665","doi":"10.1186/s12915-025-02263-2","title":"Single-cell chromatin accessibility profiling reveals regulatory mechanisms and evolution in pig brains","year":2025,"lang":"en","type":"article","venue":"BMC Biology","topic":"Single-cell and spatial transcriptomics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ministry of Agriculture","funders":"National Key Research and Development Program of China; National Natural Science Foundation of China","keywords":"Biology; Chromatin; Profiling (computer programming); Computational biology; Cell biology; Gene expression profiling; Cell; Genetics; Evolutionary biology; Gene; Gene expression","score_opus":0.016923784816156893,"score_gpt":0.2561912239771916,"score_spread":0.23926743916103468,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4411137665","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99333787,0.0006263782,0.0048083463,0.000022590608,0.0000063698953,0.000008998906,0.0005906129,0.00003458646,0.000564126],"genre_scores_gemma":[0.9940963,0.00041255527,0.0034893877,0.0000510468,0.0000073698075,0.00002810785,0.0011527087,0.000022135002,0.00074047514],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99992,0.000008325433,0.0000032736552,0.0000416827,0.00001202749,0.0000147464825],"domain_scores_gemma":[0.99986744,0.000050822044,0.00003668787,0.000014597979,0.000017051962,0.000013419258],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00018808685,0.000092771144,0.00016076825,0.0005189184,0.00013695222,0.00026619653,0.00013294593,0.00023981326,0.00075311377],"category_scores_gemma":[0.00022988055,0.00012013293,0.00022488588,0.00023901662,0.00021121811,0.00013399131,0.00015410983,0.00016031422,0.00018410485],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008916937,0.0000071087034,0.027654784,0.00004097668,0.000025991822,0.000099308134,0.00015648323,0.00015220343,0.9653885,0.00008822983,0.00005704543,0.006240144],"study_design_scores_gemma":[0.00000557755,0.00020592604,0.88815624,0.000017009439,0.00006815109,0.00089745293,0.00030096952,0.0026473878,0.10451291,0.0003423355,0.0028247137,0.000021291038],"about_ca_topic_score_codex":0.00058076554,"about_ca_topic_score_gemma":0.001647373,"teacher_disagreement_score":0.00075311377,"about_ca_system_score_codex":0.00010722476,"about_ca_system_score_gemma":0.00008470298,"threshold_uncertainty_score":0.0025193691},"labels":[],"label_agreement":null},{"id":"W4411882235","doi":"10.1186/s12915-025-02284-x","title":"Biomonitoring 2.0 Refined: observing local change through metaphylogeography using a community-based eDNA metabarcoding monitoring network","year":2025,"lang":"en","type":"article","venue":"BMC Biology","topic":"Environmental DNA in Biodiversity Studies","field":"Environmental Science","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of New Brunswick; University of Guelph","funders":"Environment and Climate Change Canada; Government of Canada; Ontario Genomics; Nature Conservancy of Canada; Genome Canada","keywords":"Biomonitoring; Intraspecific competition; Biology; Ecology; DNA barcoding; Biological dispersal; Biodiversity; Amplicon; Evolutionary biology; Polymerase chain reaction; Genetics","score_opus":0.13580800421936,"score_gpt":0.3176559199839877,"score_spread":0.18184791576462767,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4411882235","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.71715844,0.00039883735,0.22618774,0.00048266436,0.000046031386,0.00074747996,0.03730788,0.0064751552,0.01119589],"genre_scores_gemma":[0.49824032,0.00016237833,0.4740707,0.00021826755,0.000029309982,0.0009789539,0.022383627,0.0008321695,0.0030842423],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9985551,0.00032044633,0.00008618612,0.000613551,0.00033528582,0.000089409805],"domain_scores_gemma":[0.9968875,0.0006514905,0.0010935398,0.000490715,0.00064120017,0.00023554108],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0030081016,0.00043359923,0.00039290157,0.002048898,0.00069381035,0.0010564462,0.00096505036,0.000600258,0.0024038544],"category_scores_gemma":[0.0042484784,0.00040909008,0.00047620464,0.0019775792,0.00041772073,0.00081449974,0.0017929896,0.000756621,0.001100526],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005943226,0.00023936587,0.62745726,0.00076549355,0.0005173213,0.00035648097,0.00411164,0.011843802,0.19840407,0.003082801,0.009099837,0.14352763],"study_design_scores_gemma":[0.000083591265,0.00039391933,0.807963,0.00017069832,0.00030860212,0.0008128896,0.00092874665,0.06514467,0.063536584,0.0037213287,0.056774568,0.00016144816],"about_ca_topic_score_codex":0.0057276664,"about_ca_topic_score_gemma":0.015118582,"teacher_disagreement_score":0.0057276664,"about_ca_system_score_codex":0.00053523795,"about_ca_system_score_gemma":0.0008472997,"threshold_uncertainty_score":0.01590854},"labels":[],"label_agreement":null},{"id":"W4411896618","doi":"10.1186/s12915-025-02280-1","title":"Epigenetic silencing and genome dynamics determine the fate of giant virus endogenizations in Acanthamoeba","year":2025,"lang":"en","type":"article","venue":"BMC Biology","topic":"Legionella and Acanthamoeba research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University","funders":"European Research Council; Natural Sciences and Engineering Research Council of Canada; Gordon and Betty Moore Foundation","keywords":"Biology; Giant Virus; Genome; Genetics; Epigenetics; Horizontal gene transfer; Genome evolution; Viral evolution; Eukaryote; Mobile genetic elements; Gene","score_opus":0.016050832272982655,"score_gpt":0.27917488370262383,"score_spread":0.2631240514296412,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4411896618","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9978974,0.0002669144,0.0011756113,0.000018419394,0.0000027441426,0.000003628253,0.00011906759,0.000028113262,0.0004882644],"genre_scores_gemma":[0.9987612,0.00010003567,0.00058687595,0.0000108979175,0.000001486212,0.000005256727,0.00016977268,0.000010710987,0.00035384626],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999559,0.0000036407478,0.0000027392869,0.000015152027,0.000010853521,0.000011763814],"domain_scores_gemma":[0.9998336,0.000035730485,0.000048795326,0.000016740953,0.000035460474,0.000029651232],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000058115817,0.000106479725,0.00013840946,0.00019151895,0.00018179316,0.00027976066,0.000108251596,0.00023732982,0.00043568684],"category_scores_gemma":[0.00018444449,0.00011800604,0.0001411426,0.0001412472,0.000185505,0.00022004524,0.00015565935,0.00022830152,0.00020305025],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000027442074,0.0000047489884,0.0033030163,0.000012053716,0.000002041726,0.000024788584,0.000056413206,0.00008146372,0.9955706,0.00006937619,0.00000846129,0.0008396033],"study_design_scores_gemma":[0.000009921577,0.00018466332,0.3876211,0.000011386638,0.000028007724,0.00034286323,0.0006748191,0.005684113,0.601002,0.00058192434,0.0038348269,0.000024470135],"about_ca_topic_score_codex":0.0024477746,"about_ca_topic_score_gemma":0.003151207,"teacher_disagreement_score":0.0024477746,"about_ca_system_score_codex":0.00034006088,"about_ca_system_score_gemma":0.00017032963,"threshold_uncertainty_score":0.004867077},"labels":[],"label_agreement":null},{"id":"W4412151446","doi":"10.1186/s12915-025-02298-5","title":"A minimized symbiotic gene set from the 1.68 Mb pSymB chromid of Sinorhizobium meliloti reveals auxiliary symbiotic loci","year":2025,"lang":"en","type":"article","venue":"BMC Biology","topic":"Legume Nitrogen Fixing Symbiosis","field":"Agricultural and Biological Sciences","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Queen's University; McMaster University","funders":"Natural Sciences and Engineering Research Council of Canada; Genome Canada; U.S. Department of Agriculture","keywords":"Biology; Rhizobia; Symbiosis; Sinorhizobium meliloti; Nitrogen fixation; Genome; Gene; Sinorhizobium; Root nodule; Rhizobium; Rhizobiaceae; Genetics; Botany; Bacteria","score_opus":0.02311888717496223,"score_gpt":0.24768263533145318,"score_spread":0.22456374815649094,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4412151446","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9957027,0.00025295428,0.0026362438,0.000055763365,0.000019793479,0.00003545509,0.0007953774,0.00008230523,0.00041934813],"genre_scores_gemma":[0.9901072,0.00020015192,0.0041785683,0.00006727466,0.000007948904,0.000048909907,0.003365731,0.00008007806,0.0019440134],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998627,0.000016919197,0.000011724281,0.000030932846,0.000047406964,0.000030343233],"domain_scores_gemma":[0.9998165,0.00004860574,0.00005170532,0.000022284143,0.000011967541,0.000048996164],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000110436544,0.0005588069,0.0003743043,0.00038585754,0.00016710308,0.00026604632,0.00034854244,0.00030784373,0.0010788769],"category_scores_gemma":[0.00018413065,0.0002400963,0.0002997326,0.00025928378,0.0002676596,0.000083055544,0.0003365913,0.0006680701,0.00037199116],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00005354961,0.000009613166,0.0001235267,0.000011699896,0.0000021278543,0.000038135382,0.0000076131446,0.00002611971,0.9994336,0.00002090037,0.0000066004195,0.00026651888],"study_design_scores_gemma":[0.00006007067,0.00041130444,0.023443805,0.000015759364,0.00005696089,0.00087490096,0.00009201148,0.002012891,0.96945983,0.000086504246,0.0034683053,0.000017590164],"about_ca_topic_score_codex":0.0015925742,"about_ca_topic_score_gemma":0.002878099,"teacher_disagreement_score":0.0015925742,"about_ca_system_score_codex":0.00039621713,"about_ca_system_score_gemma":0.0002993822,"threshold_uncertainty_score":0.0036091805},"labels":[],"label_agreement":null},{"id":"W4412877897","doi":"10.1186/s12915-025-02335-3","title":"Quantification of leg mobility in the Burgess Shale Olenoides serratus indicates functional differences between trilobite and xiphosuran appendages","year":2025,"lang":"en","type":"article","venue":"BMC Biology","topic":"Subterranean biodiversity and taxonomy","field":"Earth and Planetary Sciences","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Biology; Appendage; Trilobite; Arthropod; Evolutionary biology; Anatomy; Paleontology; Ecology","score_opus":0.09174648284979037,"score_gpt":0.2432710724721434,"score_spread":0.15152458962235305,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4412877897","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99942565,0.0000781434,0.00015539203,0.000002464884,5.9483347e-7,0.0000021357034,0.000094739364,0.000005284203,0.00023561575],"genre_scores_gemma":[0.99896157,0.00004584233,0.000537917,0.000006731196,0.0000012704238,0.000008320936,0.00025116713,0.0000026153562,0.0001846009],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9998952,0.000012472664,0.000009118549,0.000046466805,0.000018967768,0.000017790062],"domain_scores_gemma":[0.99960023,0.000052457348,0.0002124158,0.00002924066,0.000036717054,0.000068889596],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015525067,0.00027108612,0.00017013095,0.001548382,0.00032302816,0.00026842576,0.00021495228,0.0002944786,0.0016943266],"category_scores_gemma":[0.00044422856,0.00017080305,0.00019843757,0.0005125458,0.0005917656,0.00029720322,0.00048650624,0.00017539268,0.00030501606],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002198199,0.000034048047,0.84964705,0.00014457737,0.00006145141,0.00017829544,0.0013777656,0.00031942123,0.13257901,0.000105010375,0.000087115215,0.0152463745],"study_design_scores_gemma":[0.0000013296725,0.000073252784,0.9984609,0.000008791193,0.000009600697,0.0001567631,0.00018683985,0.00017484935,0.0007738169,0.000013489211,0.00013771058,0.0000026880623],"about_ca_topic_score_codex":0.002737378,"about_ca_topic_score_gemma":0.00983259,"teacher_disagreement_score":0.002737378,"about_ca_system_score_codex":0.00017440692,"about_ca_system_score_gemma":0.00012097451,"threshold_uncertainty_score":0.005668044},"labels":[],"label_agreement":null},{"id":"W4413051569","doi":"10.1186/s12915-025-02339-z","title":"Transcriptional patterns of cancer-related genes in primary and metastatic tumours revealed by machine learning","year":2025,"lang":"en","type":"article","venue":"BMC Biology","topic":"Ferroptosis and cancer prognosis","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Simon Fraser University; Canada's Michael Smith Genome Sciences Centre; University of British Columbia","funders":"National Human Genome Research Institute; University of British Columbia; Genome Canada; Canadian Institutes of Health Research; Genome British Columbia; National Cancer Institute; BC Cancer Foundation","keywords":"Biology; Gene; Primary (astronomy); Cancer; Computational biology; Cancer research; Bioinformatics; Genetics","score_opus":0.01830752892436525,"score_gpt":0.29415245850435906,"score_spread":0.2758449295799938,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4413051569","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9796872,0.000991946,0.016101355,0.0000968748,0.000013627827,0.000025354466,0.002011196,0.00019615512,0.00087621063],"genre_scores_gemma":[0.98952967,0.00030891772,0.0073854453,0.000030640687,0.000011293665,0.00003445712,0.0023186237,0.000014599291,0.00036639994],"study_design_codex":"bench_or_experimental","study_design_gemma":"simulation_or_modeling","domain_scores_codex":[0.99984217,0.000023757117,0.000009538044,0.000053296935,0.000038199243,0.00003312244],"domain_scores_gemma":[0.9996717,0.00017224906,0.000073678755,0.000020217938,0.00004030388,0.000021863389],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002563606,0.00017104835,0.00024534747,0.00056507665,0.000111901645,0.00027055162,0.000104725674,0.00022202947,0.0006533621],"category_scores_gemma":[0.00049144303,0.000064959866,0.00028035394,0.0007266139,0.0001949103,0.000100924546,0.00010787764,0.0002768626,0.00025082493],"study_design_candidate":"simulation_or_modeling","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0010797369,0.00019844057,0.15411839,0.000410904,0.00016268183,0.00037311652,0.0002635432,0.01646535,0.7403906,0.0005830363,0.00074670394,0.0852075],"study_design_scores_gemma":[0.000030472704,0.00072676473,0.65203965,0.000047545356,0.00022544748,0.0012766953,0.0002686957,0.16144237,0.17726827,0.002840585,0.0037829506,0.000050538983],"about_ca_topic_score_codex":0.0006161797,"about_ca_topic_score_gemma":0.0006314216,"teacher_disagreement_score":0.0006533621,"about_ca_system_score_codex":0.00022147868,"about_ca_system_score_gemma":0.00016693445,"threshold_uncertainty_score":0.0021857023},"labels":[],"label_agreement":null},{"id":"W4413258064","doi":"10.1186/s12915-025-02352-2","title":"Gustatory receptors interact with the serotonin pathway to regulate silkmoth stereotyped courtship behavior","year":2025,"lang":"en","type":"article","venue":"BMC Biology","topic":"Neurobiology and Insect Physiology Research","field":"Neuroscience","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ministry of Agriculture","funders":"Jiangsu Association for Science and Technology; Natural Science Foundation of Jiangsu Province; Jiangsu University of Science and Technology; Government of Jiangsu Province; Jiangsu University; National Natural Science Foundation of China","keywords":"Biology; Courtship; Serotonin; Receptor; Courtship display; Cell biology; Neuroscience; Zoology; Genetics","score_opus":0.03800288268839182,"score_gpt":0.32887600822759244,"score_spread":0.29087312553920064,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4413258064","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99410003,0.0010570444,0.0034020366,0.000055312627,0.000008269448,0.000014232483,0.00023751752,0.00006292916,0.0010625328],"genre_scores_gemma":[0.99622333,0.00041130141,0.0015619803,0.000043595497,0.0000037201241,0.000016275339,0.0003594009,0.000013539598,0.0013669131],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.999941,0.0000060989105,0.000004205867,0.000014563204,0.0000148393665,0.00001934184],"domain_scores_gemma":[0.99993193,0.000008999308,0.000028069611,0.000005079443,0.000009436529,0.000016598466],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000049074868,0.00030451574,0.00012632235,0.00009543521,0.00011819219,0.00014689895,0.00018655046,0.0001982999,0.0010515833],"category_scores_gemma":[0.000061102764,0.00010235255,0.00019864448,0.00005411559,0.00016785013,0.00010582562,0.00018787802,0.00026105065,0.0003762236],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000056080593,0.0000058688242,0.000990276,0.000025184381,0.000006190172,0.00006228737,0.000009000963,0.000052332914,0.9979673,0.000048047936,0.00002793725,0.0007495154],"study_design_scores_gemma":[0.00003651459,0.0003175344,0.15133396,0.000026125905,0.000087113185,0.00067799934,0.00010342628,0.004114206,0.840417,0.00009522408,0.0027753867,0.000015546639],"about_ca_topic_score_codex":0.0009544157,"about_ca_topic_score_gemma":0.0013950825,"teacher_disagreement_score":0.0010515833,"about_ca_system_score_codex":0.00023615517,"about_ca_system_score_gemma":0.000114559814,"threshold_uncertainty_score":0.0035178661},"labels":[],"label_agreement":null},{"id":"W4413641730","doi":"10.1186/s12915-025-02366-w","title":"Understanding the traits underlying vaccine-driven virulence evolution in malaria parasites","year":2025,"lang":"en","type":"article","venue":"BMC Biology","topic":"Malaria Research and Control","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Biology; Virulence; Vaccination; Parasite hosting; Malaria vaccine; Malaria; Immune system; Vaccine efficacy; Immunity; Immunology; Antigenic variation; Host (biology); Experimental evolution; Virology; Plasmodium falciparum; Genetics; Gene","score_opus":0.106103037792843,"score_gpt":0.3585984519638039,"score_spread":0.2524954141709609,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4413641730","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.963129,0.00023510502,0.035454888,0.00016855709,0.000006485678,0.000016637921,0.00037050265,0.000054700085,0.000564145],"genre_scores_gemma":[0.99408567,0.00010977111,0.0053999554,0.000027508206,0.0000034539344,0.000014831498,0.00021941254,0.000016918424,0.00012256915],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99969566,0.00010447922,0.000016782054,0.00009517733,0.00004380268,0.00004399568],"domain_scores_gemma":[0.99852836,0.00074967934,0.00046856323,0.00010593443,0.00008538063,0.0000621284],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009637631,0.00033166827,0.0003208943,0.00024014688,0.00015750909,0.0004872267,0.00032569066,0.00057046436,0.0008953256],"category_scores_gemma":[0.0039094887,0.00017194985,0.0004245779,0.00020122757,0.00042469794,0.0006800476,0.00030172497,0.00072809344,0.00013356104],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00040527654,0.00024519127,0.18361901,0.0005953028,0.00034320797,0.00018157996,0.0003954231,0.35199586,0.41497514,0.014799013,0.00065166585,0.031793304],"study_design_scores_gemma":[0.000021732249,0.0004641334,0.29867163,0.000046982506,0.00012965298,0.00026754447,0.00012044635,0.6553229,0.02997801,0.0131072,0.0018078855,0.00006186846],"about_ca_topic_score_codex":0.0014299804,"about_ca_topic_score_gemma":0.0015260086,"teacher_disagreement_score":0.0014299804,"about_ca_system_score_codex":0.0008126415,"about_ca_system_score_gemma":0.00042278567,"threshold_uncertainty_score":0.0058960915},"labels":[],"label_agreement":null},{"id":"W4413685372","doi":"10.1186/s12915-025-02364-y","title":"A species-wide inventory of receptor-like kinases in Arabidopsis thaliana","year":2025,"lang":"en","type":"article","venue":"BMC Biology","topic":"Plant-Microbe Interactions and Immunity","field":"Agricultural and Biological Sciences","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"The Scarborough Hospital; University of Toronto","funders":"Natural Sciences and Engineering Research Council of Canada; Alliance de recherche numérique du Canada; University of Toronto; Innovation, Science and Economic Development Canada","keywords":"Biology; Ecotype; Arabidopsis; Gene duplication; Evolutionary biology; Arabidopsis thaliana; Tandem exon duplication; Gene; Gene family; Adaptation (eye); Phylogenetics; Function (biology); Genetics; Receptor; Negative selection; Genome; Mutant","score_opus":0.03493316478133523,"score_gpt":0.25232167055943666,"score_spread":0.21738850577810143,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4413685372","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.96913713,0.0025605378,0.0018008084,0.00007023167,0.00001423536,0.00004036852,0.024391845,0.00018293413,0.0018019724],"genre_scores_gemma":[0.9532343,0.0013486409,0.0070085805,0.00016720942,0.000019466097,0.00006911942,0.036940947,0.0001089662,0.0011027133],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99977607,0.000018524743,0.000016701208,0.00011484743,0.00003883073,0.00003506305],"domain_scores_gemma":[0.99937797,0.00011322879,0.00019043949,0.000069727495,0.00010653336,0.00014209333],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00037250362,0.00032155422,0.0002704454,0.0024384602,0.0004145735,0.00039559556,0.00027734076,0.00023073431,0.0015930602],"category_scores_gemma":[0.00034181133,0.00011804914,0.00034797404,0.002129671,0.00013435888,0.00030924895,0.00030568623,0.0002560201,0.00060094777],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006640981,0.00007571457,0.3672596,0.0007304696,0.0003779814,0.00062738854,0.0008925991,0.0003811896,0.58108497,0.0003278363,0.0019749878,0.045603167],"study_design_scores_gemma":[0.000014413926,0.0001119396,0.9773646,0.00002951724,0.00018001546,0.0011889783,0.00040415832,0.00035491376,0.007271597,0.00018055293,0.01287796,0.000021337537],"about_ca_topic_score_codex":0.0021874593,"about_ca_topic_score_gemma":0.0062127193,"teacher_disagreement_score":0.0024384602,"about_ca_system_score_codex":0.00037102096,"about_ca_system_score_gemma":0.0002936395,"threshold_uncertainty_score":0.005329311},"labels":[],"label_agreement":null},{"id":"W4414767847","doi":"10.1186/s12915-025-02408-3","title":"Multi-omics analysis reveals diapause-associated lipid remodeling in the fat body of Colorado potato beetle","year":2025,"lang":"en","type":"article","venue":"BMC Biology","topic":"Physiological and biochemical adaptations","field":"Environmental Science","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan; Agriculture and Agri-Food Canada","funders":"","keywords":"Transcriptome; Colorado potato beetle; Diapause; Lipid metabolism; Proteome; Fat body; Composition (language)","score_opus":0.03006645700162066,"score_gpt":0.2799268057111159,"score_spread":0.24986034870949522,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4414767847","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9591905,0.009553788,0.008981619,0.0004357337,0.00005967403,0.000062753454,0.019722516,0.0002553283,0.0017381253],"genre_scores_gemma":[0.9259625,0.0056619467,0.022877952,0.0006555066,0.000055797555,0.00022963075,0.041979082,0.00012618898,0.0024514673],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9997558,0.00001425594,0.000014326157,0.000115066665,0.000053656247,0.000046894886],"domain_scores_gemma":[0.99986887,0.000022972714,0.00003548121,0.000010521427,0.000045730718,0.000016381791],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00026114003,0.00061447575,0.00081899465,0.0016799433,0.0007575481,0.0009963817,0.0002667585,0.0006364183,0.0007609965],"category_scores_gemma":[0.00023309098,0.00024996715,0.000995977,0.0014473689,0.00022490112,0.00048034664,0.00065720786,0.00060360983,0.00033158227],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00043431993,0.000062290725,0.049181525,0.00067620614,0.0002926774,0.00037991718,0.00028479402,0.00071497116,0.9312848,0.00016168022,0.0009717845,0.015555033],"study_design_scores_gemma":[0.000025099278,0.00019654474,0.89954734,0.00014001643,0.00048480605,0.00086123485,0.0012825554,0.011714436,0.07155532,0.00081901305,0.013288532,0.00008530902],"about_ca_topic_score_codex":0.0027131115,"about_ca_topic_score_gemma":0.0042244988,"teacher_disagreement_score":0.0027131115,"about_ca_system_score_codex":0.00043239153,"about_ca_system_score_gemma":0.00038124245,"threshold_uncertainty_score":0.005394578},"labels":[],"label_agreement":null},{"id":"W4416889782","doi":"10.1186/s12915-025-02475-6","title":"Kelch-type F-box protein TaFBK34 improves wheat seedling tolerance to heat stress","year":2025,"lang":"en","type":"article","venue":"BMC Biology","topic":"Plant Stress Responses and Tolerance","field":"Agricultural and Biological Sciences","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Agriculture and Agri-Food Canada","funders":"National Key Research and Development Program of China; Natural Science Foundation of Hebei Province","keywords":"Seedling; Heat stress; Gene; Stress (linguistics); Fight-or-flight response","score_opus":0.0166474554734851,"score_gpt":0.25234442264435347,"score_spread":0.23569696717086838,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4416889782","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99465275,0.00078982936,0.0029550805,0.000100597805,0.00003933115,0.00002015601,0.00054592907,0.00025284497,0.0006434303],"genre_scores_gemma":[0.99438757,0.00033547997,0.0021693262,0.0000558251,0.0000053877757,0.000019131076,0.0006641972,0.00004172554,0.002321527],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999403,0.0000051114503,0.0000064061037,0.000019789308,0.000013285077,0.000015118708],"domain_scores_gemma":[0.9999181,0.000008640336,0.000025709027,0.000008711459,0.000010697227,0.000028047654],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00008537621,0.0003099485,0.00027415183,0.00016357977,0.00018763688,0.00019366173,0.00023544383,0.00025282183,0.0017971034],"category_scores_gemma":[0.00006514684,0.00012231004,0.0002256359,0.00012461748,0.00017052235,0.00017731484,0.00020576575,0.00045763797,0.0003224405],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006821095,0.00001520743,0.00011346424,0.000037258615,0.000003465548,0.000017696802,0.0000064626333,0.000023768138,0.9989122,0.000023970275,0.00003635965,0.00074199116],"study_design_scores_gemma":[0.00005399295,0.0002693856,0.016103597,0.0000125208735,0.000058534166,0.00023543219,0.000047878275,0.0017767888,0.97631466,0.00006551815,0.0050486126,0.000013029535],"about_ca_topic_score_codex":0.0005787801,"about_ca_topic_score_gemma":0.0011049096,"teacher_disagreement_score":0.0017971034,"about_ca_system_score_codex":0.0002533027,"about_ca_system_score_gemma":0.00017657939,"threshold_uncertainty_score":0.0060119033},"labels":[],"label_agreement":null},{"id":"W4417497698","doi":"10.1186/s12915-025-02493-4","title":"Correction: A species-wide inventory of receptor-like kinases in Arabidopsis thaliana","year":2025,"lang":"en","type":"article","venue":"BMC Biology","topic":"Plant Molecular Biology Research","field":"Agricultural and Biological Sciences","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"The Scarborough Hospital; University of Toronto","funders":"","keywords":"Arabidopsis thaliana; Kinase; Arabidopsis; Protein-Serine-Threonine Kinases; Signal transduction","score_opus":0.03601909923610574,"score_gpt":0.26841940732823616,"score_spread":0.23240030809213041,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4417497698","genre_codex":"editorial","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.001177432,0.002104361,0.002383053,0.05434837,0.9279257,0.000030495905,0.008387683,0.0012444269,0.002398497],"genre_scores_gemma":[0.11524674,0.017686315,0.020854056,0.13221307,0.40120077,0.00051376096,0.041467775,0.0067236065,0.26409394],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9971722,0.0004076355,0.0004055579,0.0006020224,0.0010975144,0.00031509457],"domain_scores_gemma":[0.9728702,0.005834523,0.0017474565,0.0026725363,0.014699029,0.0021761952],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0034320136,0.0015588839,0.0014435353,0.0030831893,0.0020394644,0.002776133,0.0028365285,0.0032638435,0.06662164],"category_scores_gemma":[0.04932914,0.0007322807,0.0011824038,0.002834029,0.0012964642,0.0019934885,0.0022789498,0.005423089,0.02606612],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010074256,0.000005773801,0.0003139344,0.0003802735,0.000056155422,0.0003437887,0.00005374976,0.000085231826,0.0005321762,0.0008027842,0.9889264,0.008398993],"study_design_scores_gemma":[0.000105121006,0.000025854117,0.0032394528,0.00042467949,0.00012204301,0.00096700253,0.000117888696,0.00032105666,0.0010381405,0.0017190614,0.9918576,0.000062043524],"about_ca_topic_score_codex":0.011560382,"about_ca_topic_score_gemma":0.012316693,"teacher_disagreement_score":0.06662164,"about_ca_system_score_codex":0.0022594796,"about_ca_system_score_gemma":0.0048126387,"threshold_uncertainty_score":0.22287154},"labels":[],"label_agreement":null},{"id":"W7117471630","doi":"10.1186/s12915-025-02455-w","title":"ntSynt: multi-genome synteny detection using minimizer graph mappings","year":2025,"lang":"en","type":"article","venue":"BMC Biology","topic":"Genome Rearrangement Algorithms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia; Canada's Michael Smith Genome Sciences Centre","funders":"Canadian Institutes of Health Research","keywords":"Synteny; Scalability; Graph; Tree (set theory); Supertree; Graph theory","score_opus":0.025885339511566394,"score_gpt":0.28384065305423656,"score_spread":0.25795531354267015,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7117471630","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.07248627,0.00031053787,0.7992101,0.00027452532,0.0001505733,0.00028593713,0.012577289,0.1091561,0.0055486723],"genre_scores_gemma":[0.23724982,0.00034554637,0.7132373,0.00013175863,0.000044422275,0.00061309844,0.032772027,0.012351594,0.003254404],"study_design_codex":"design_other","study_design_gemma":"simulation_or_modeling","domain_scores_codex":[0.9994191,0.000107306594,0.000039631337,0.0001814795,0.0002095628,0.000042926586],"domain_scores_gemma":[0.99880016,0.0006036606,0.00013559048,0.0002307869,0.00016293778,0.00006692874],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000992806,0.0015843795,0.00074610894,0.0021284644,0.000911851,0.0016326763,0.002028465,0.0009165255,0.01252733],"category_scores_gemma":[0.0051139765,0.000700079,0.0013114299,0.0016335407,0.0006001267,0.0019612443,0.0023492945,0.0010586375,0.0030111736],"study_design_candidate":"simulation_or_modeling","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0017153983,0.00040415465,0.022136137,0.0042838724,0.0010089342,0.001744461,0.0018090636,0.13713746,0.19463597,0.051702313,0.14037278,0.4430495],"study_design_scores_gemma":[0.00026684723,0.000333511,0.0063095097,0.00016892797,0.00015363343,0.0009958879,0.00049970293,0.8068267,0.07350343,0.050444383,0.060358427,0.00013905497],"about_ca_topic_score_codex":0.002467955,"about_ca_topic_score_gemma":0.004973816,"teacher_disagreement_score":0.01252733,"about_ca_system_score_codex":0.00077269867,"about_ca_system_score_gemma":0.0010637109,"threshold_uncertainty_score":0.041908026},"labels":[],"label_agreement":null}]}