{"meta":{"query_hash":"ae690cf84a75","filters":{"venue":"BMC Plant Biology"},"cohort_total":433,"direct_labels_cover":1,"predictions_cover":433,"exported":433,"export_cap":100000,"truncated":false,"label_status":"direct model label, unvalidated","prediction_status":"machine_predicted_unvalidated (Codex and Gemma teacher distillation)","score_status":"score_only:v0-immature-baseline","snapshot":{"source":"OpenAlex, pinned release, all 482 partitions","release":"2026-06-24","frame_built":"2026-07-12"},"permalink":"https://metacan.xera.ac/q/ae690cf84a75","api":"https://metacan.xera.ac/api/v1/cohort?venue=BMC+Plant+Biology"},"results":[{"id":"W1515028586","doi":"10.1186/s12870-015-0528-z","title":"RNA-Seq analysis identifies genes associated with differential reproductive success under drought-stress in accessions of wild barley Hordeum spontaneum","year":2015,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Wheat and Barley Genetics and Pathology","field":"Agricultural and Biological Sciences","cited_by":75,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"Svenska Forskningsrådet Formas; University of Haifa; Deutscher Akademischer Austauschdienst","keywords":"Biology; Adaptation (eye); Gene; Drought tolerance; Hordeum; Genome; Genetics; Reproductive success; Genomics; Quantitative trait locus; Hordeum vulgare; Evolutionary biology; Botany; Poaceae; Population","score_opus":0.042288979687206206,"score_gpt":0.255487997355444,"score_spread":0.21319901766823776,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1515028586","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9980244,0.0003847812,0.000031453368,0.00027491478,0.0002372194,0.00011209797,0.0006988302,0.000023698913,0.00021259763],"genre_scores_gemma":[0.9978299,0.00009349654,0.000029513181,0.000025159505,0.00015055394,0.0000141409955,0.0015612156,0.0000014285731,0.00029457235],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9983396,0.00034022462,0.00033915124,0.0005048844,0.00013681014,0.00033935785],"domain_scores_gemma":[0.99925894,0.00020606969,0.00020483242,0.00011572195,0.00012246368,0.00009198989],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00028673632,0.00018892327,0.0005037504,0.000102673956,0.00008287196,0.000028843731,0.00032041327,0.0002320405,0.00011665985],"category_scores_gemma":[0.00006420931,0.000071446986,0.000106041436,0.00083199586,0.00018020117,0.00006128631,0.0001191706,0.00012496774,0.000002437773],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00024349208,0.0002141315,0.7789385,0.0000036924207,0.00015845266,0.000017494594,0.00010597978,0.00014147004,0.21921492,0.000188142,0.00007305486,0.00070069166],"study_design_scores_gemma":[0.00037107652,0.00044831407,0.9685917,0.00002453159,0.0001867826,0.00001406673,0.00047659004,0.000097793716,0.028783467,0.0006442396,0.000101984944,0.00025947433],"about_ca_topic_score_codex":0.001973821,"about_ca_topic_score_gemma":0.07108154,"teacher_disagreement_score":0.19043145,"about_ca_system_score_codex":0.000019986492,"about_ca_system_score_gemma":0.00002680273,"threshold_uncertainty_score":0.9458688},"labels":[],"label_agreement":null},{"id":"W1531701774","doi":"10.1186/1471-2229-6-25","title":"Comprehensive transcriptional profiling of NaCl-stressed Arabidopsis roots reveals novel classes of responsive genes.","year":2006,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Plant Stress Responses and Tolerance","field":"Agricultural and Biological Sciences","cited_by":400,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"Natural Sciences and Engineering Research Council of Canada; University of Alberta","keywords":"Biology; Arabidopsis; WRKY protein domain; Transcriptome; Gene; DNA microarray; Gene expression profiling; Genetics; Transcription factor; Abiotic stress; Gene expression; Genome; Computational biology","score_opus":0.04169817285531237,"score_gpt":0.2431865007351166,"score_spread":0.20148832787980425,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1531701774","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.990006,0.0021003901,0.0000634617,0.00011398752,0.000101347076,0.00021090088,0.0072438247,0.000023372984,0.00013669794],"genre_scores_gemma":[0.9971957,0.0002690057,0.0011554229,0.000042793294,0.00012663165,0.000014184361,0.0011129176,0.0000011441117,0.00008215617],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99867004,0.0001580995,0.00046011078,0.00030368767,0.00013507639,0.00027300307],"domain_scores_gemma":[0.99843174,0.0010303478,0.00027722577,0.00006419666,0.00015371469,0.00004276043],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00010003163,0.00016971522,0.00042547283,0.000036414054,0.00007255098,0.0000065948307,0.00022261671,0.00017657164,0.00005843291],"category_scores_gemma":[0.000044141496,0.00007364151,0.00013956193,0.00019953407,0.0001737311,0.00004177038,0.0000314139,0.00008438114,0.0000035721807],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000910329,0.00012133217,0.060517818,0.00004015261,0.000019316989,0.0000038851335,0.000005202075,0.000091427406,0.9346439,0.0024988092,0.00007935168,0.0010684385],"study_design_scores_gemma":[0.00042369773,0.00025359422,0.76204985,0.00007228172,0.00001731639,0.00004822471,0.00007010523,0.000118477605,0.22901617,0.00033899266,0.0074050594,0.00018623288],"about_ca_topic_score_codex":0.00053000206,"about_ca_topic_score_gemma":0.00064165046,"teacher_disagreement_score":0.7056278,"about_ca_system_score_codex":0.000009687774,"about_ca_system_score_gemma":0.000029225814,"threshold_uncertainty_score":0.30030137},"labels":[],"label_agreement":null},{"id":"W1571074746","doi":"10.1186/1471-2229-6-6","title":"Gene amplification of the Hps locus in Glycine max","year":2006,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Transgenic Plants and Applications","field":"Biochemistry, Genetics and Molecular Biology","cited_by":25,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Agriculture and Agri-Food Canada","funders":"Agriculture and Agri-Food Canada; U.S. Department of Agriculture","keywords":"Biology; Locus (genetics); Gene; genomic DNA; Genetics; Complementary DNA; Lustre (file system); Molecular biology","score_opus":0.011779783764423808,"score_gpt":0.22597905627246895,"score_spread":0.21419927250804513,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1571074746","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9959382,0.000343264,0.0024367457,0.00012024571,0.000053688902,0.0001458445,0.00042956782,0.000004694427,0.00052776973],"genre_scores_gemma":[0.99831903,0.000070501876,0.00050974987,0.000053827618,0.000078603814,0.00002081724,0.0007662928,0.0000047414596,0.00017644216],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99945545,0.00003642816,0.0001810508,0.00017524637,0.000027779543,0.00012405822],"domain_scores_gemma":[0.99965596,0.000013391513,0.00006582321,0.00023781204,0.0000142595845,0.000012743445],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000071179624,0.00006922122,0.000089111185,0.000021836642,0.000024955858,0.0000020078849,0.00016830517,0.00010832395,0.000006413987],"category_scores_gemma":[0.000008829957,0.000047280624,0.000039058636,0.000070062735,0.00006671007,6.976163e-7,0.000027572762,0.000040718114,0.0000043579303],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000033154196,0.000043591946,0.044971593,0.0000041887515,0.000004114913,1.4341902e-7,0.0000027356787,0.000048538437,0.95235157,0.0019053301,0.00044140816,0.00019362711],"study_design_scores_gemma":[0.00046168768,0.000042825184,0.22375993,0.0000050840426,0.000008130277,0.000028034132,0.000006691821,0.000023581119,0.7442405,0.0006061682,0.03071919,0.00009816548],"about_ca_topic_score_codex":0.0002410893,"about_ca_topic_score_gemma":0.0014519433,"teacher_disagreement_score":0.20811106,"about_ca_system_score_codex":0.0000046303985,"about_ca_system_score_gemma":0.000036641413,"threshold_uncertainty_score":0.19280478},"labels":[],"label_agreement":null},{"id":"W1596422031","doi":"10.1186/1471-2229-5-12","title":"Expressed sequence tags (ESTs) and simple sequence repeat (SSR) markers from octoploid strawberry (Fragaria × ananassa)","year":2005,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Berry genetics and cultivation research","field":"Agricultural and Biological Sciences","cited_by":57,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"North American Strawberry Grower's Association; University of Florida; National Science Foundation","keywords":"Biology; Fragaria; Expressed sequence tag; Sequence (biology); Microsatellite; Genetics; Computational biology; Gene; Genome","score_opus":0.07741974562875507,"score_gpt":0.284184720748965,"score_spread":0.20676497512020992,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1596422031","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99627775,0.00029793152,0.000017463995,0.0012450224,0.0000573592,0.00019270145,0.001271979,0.000054593518,0.00058520277],"genre_scores_gemma":[0.99664533,0.0004128777,0.0008789386,0.000407563,0.00023572403,0.000022573873,0.0010900698,0.0000016028949,0.0003053129],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.998423,0.00017998552,0.00026458182,0.00055308547,0.00014847067,0.00043087063],"domain_scores_gemma":[0.99911517,0.00044708973,0.00009494764,0.000113879694,0.000055759974,0.00017316203],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00025630952,0.00018182605,0.00021537143,0.000017346143,0.0001987641,0.000069252776,0.00032608042,0.00021578868,0.00090937514],"category_scores_gemma":[0.000100776735,0.000079201876,0.000051260824,0.00015979976,0.00018448157,0.00008754059,0.00013352602,0.00016804603,0.00004189379],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006612439,0.000029476443,0.04824012,0.0000036054373,0.000013267291,0.0000061946707,0.000032354637,0.000007723197,0.92212915,0.0005246528,0.0013144409,0.027632885],"study_design_scores_gemma":[0.0007742977,0.0006267586,0.681894,0.00004455647,0.000024825185,0.000060493127,0.0006088297,0.0030845266,0.044772808,0.0056488807,0.26156652,0.0008935293],"about_ca_topic_score_codex":0.0020022818,"about_ca_topic_score_gemma":0.0050228247,"teacher_disagreement_score":0.87735635,"about_ca_system_score_codex":0.000026228225,"about_ca_system_score_gemma":0.000030345394,"threshold_uncertainty_score":0.995702},"labels":[],"label_agreement":null},{"id":"W1606995776","doi":"10.1186/s12870-015-0496-3","title":"Seedling development traits in Brassica napus examined by gene expression analysis and association mapping","year":2015,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Plant Molecular Biology Research","field":"Agricultural and Biological Sciences","cited_by":28,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Agriculture and Agri-Food Canada","funders":"Leibniz-Gemeinschaft; Deutsche Forschungsgemeinschaft; Max-Planck-Gesellschaft; Biotechnology and Biological Sciences Research Council; Leibniz-Institut für Pflanzengenetik und Kulturpflanzenforschung; Georg-August-Universität Göttingen; University of Warwick","keywords":"Seedling; Biology; Brassica; Candidate gene; Single-nucleotide polymorphism; Gene; Genetics; Genome-wide association study; Quantitative trait locus; Genetic association; Genome; Horticulture; Genotype","score_opus":0.04647615860039943,"score_gpt":0.24392156446121302,"score_spread":0.1974454058608136,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1606995776","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9989676,0.0002991208,0.00014988703,0.0001675781,0.0000356223,0.00012204139,0.00015157693,0.000027265141,0.000079315854],"genre_scores_gemma":[0.99671924,0.000035994504,0.0011556844,0.00007701642,0.00004665975,0.000018964769,0.0017834868,6.431903e-7,0.00016231631],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.998584,0.00034876794,0.00022935029,0.00035719472,0.00012136536,0.00035936452],"domain_scores_gemma":[0.999407,0.00031189236,0.000103535116,0.000028206276,0.000034262124,0.00011509698],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008240158,0.000119216005,0.00025757164,0.00006973073,0.00007728703,0.000021970118,0.00015308839,0.00026276064,0.000014428727],"category_scores_gemma":[0.00023538257,0.00005129267,0.000031698317,0.00042431272,0.000027856386,0.000034736655,0.00010337866,0.00012736005,0.000009560614],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000024861447,0.000018642437,0.3845009,0.0000010876914,0.000021161793,0.0000031147622,0.000051221003,0.0000012427394,0.61315334,0.0000018862851,0.00020074921,0.0020218177],"study_design_scores_gemma":[0.00038363374,0.00010561399,0.8744869,0.000012542987,0.000017507857,0.000013062881,0.00013605902,0.00023054698,0.11725458,0.000038656945,0.007085112,0.0002357807],"about_ca_topic_score_codex":0.00014813479,"about_ca_topic_score_gemma":0.002011655,"teacher_disagreement_score":0.49589875,"about_ca_system_score_codex":0.00008156895,"about_ca_system_score_gemma":0.000026281989,"threshold_uncertainty_score":0.20916545},"labels":[],"label_agreement":null},{"id":"W1857817011","doi":"10.1186/s12870-015-0578-2","title":"Genome-wide identification and transcriptional analysis of folate metabolism-related genes in maize kernels","year":2015,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Folate and B Vitamins Research","field":"Medicine","cited_by":21,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Biotechnology Research Institute","funders":"National Key Research and Development Program of China; Huazhong Agricultural University","keywords":"Biology; Gene; Metabolism; In silico; Secondary metabolism; Transcriptome; Gene expression profiling; Genome; Inbred strain; Enzyme; Genetics; Gene expression; Biochemistry; Biosynthesis","score_opus":0.05967001736657166,"score_gpt":0.3108093840949519,"score_spread":0.2511393667283802,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1857817011","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99442995,0.004625743,0.00024454104,0.00012800835,0.000054194177,0.00016659507,0.00018116807,0.000011228399,0.00015856819],"genre_scores_gemma":[0.9975388,0.0006591613,0.00017603168,0.00002799188,0.000017905028,0.000008971812,0.0011228394,0.0000053858644,0.0004429234],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.999017,0.00011876092,0.00035516848,0.00022067396,0.00011349053,0.0001748803],"domain_scores_gemma":[0.99953514,0.00008371651,0.000067293055,0.00013840845,0.00008352116,0.00009189633],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005409642,0.00008362133,0.00038516446,0.0006315587,0.000014411076,0.000005288485,0.0000655904,0.00013700429,0.000063781896],"category_scores_gemma":[0.00008933748,0.00006507753,0.00007348777,0.0005461598,0.00009454516,0.000041624142,0.000019675648,0.00009537999,0.000014413647],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00038331974,0.00008617068,0.5399416,0.000024404853,0.00059846847,0.000009372408,0.0003286139,0.000043507163,0.45703387,0.0009969367,0.000017011798,0.00053672085],"study_design_scores_gemma":[0.0012004686,0.00009711173,0.9918726,0.0000060321627,0.00045973735,0.000021873999,0.00008529445,0.0016530439,0.0030089396,0.00034352712,0.0011836295,0.00006773679],"about_ca_topic_score_codex":0.00031204088,"about_ca_topic_score_gemma":0.00042994897,"teacher_disagreement_score":0.45402494,"about_ca_system_score_codex":0.000022699975,"about_ca_system_score_gemma":0.000083237566,"threshold_uncertainty_score":0.26537848},"labels":[],"label_agreement":null},{"id":"W1867489969","doi":"10.1186/s12870-015-0594-2","title":"Metabolome analysis of 20 taxonomically related benzylisoquinoline alkaloid-producing plants","year":2015,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Berberine and alkaloids research","field":"Medicine","cited_by":53,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Victoria; University of Alberta; University of Calgary","funders":"Genome Alberta; Government of Alberta; Genome Canada","keywords":"Metabolomics; Biology; Metabolome; Benzylisoquinoline; Biochemistry; Hydroxycinnamic acid; Alkaloid; Botany; Computational biology; Biosynthesis; Bioinformatics; Gene","score_opus":0.08894580684287029,"score_gpt":0.3296178273455303,"score_spread":0.24067202050266,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1867489969","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9951347,0.0012262051,0.00012527466,0.00033539967,0.00014104844,0.00025173248,0.00066686544,0.000051145398,0.0020675983],"genre_scores_gemma":[0.99265474,0.0001989821,0.0022368184,0.00015677376,0.00014083472,0.000015000294,0.0031806144,0.000016715834,0.0013995381],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99820936,0.00014902753,0.0005850851,0.00045764013,0.00017323907,0.00042562606],"domain_scores_gemma":[0.9987468,0.00018355378,0.00017023453,0.00047818542,0.00014453994,0.00027665574],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006796524,0.0001797049,0.0009499489,0.00070377445,0.000027971591,0.0000058943283,0.00019096403,0.00022840427,0.00026364007],"category_scores_gemma":[0.0004416824,0.00013514921,0.00019765575,0.00071176275,0.00014915969,0.000043429143,0.00013076013,0.0002708024,0.00008325523],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0025266618,0.0005002378,0.6359693,0.00009715115,0.0049745785,0.00010701511,0.00037814333,0.00041288123,0.3432986,0.001142583,0.007709299,0.0028835465],"study_design_scores_gemma":[0.019047283,0.005266139,0.5966851,0.00024653546,0.008312081,0.0011480453,0.0010080525,0.025475055,0.12630251,0.0009235435,0.213795,0.0017906391],"about_ca_topic_score_codex":0.0005997233,"about_ca_topic_score_gemma":0.0005090734,"teacher_disagreement_score":0.2169961,"about_ca_system_score_codex":0.00004165012,"about_ca_system_score_gemma":0.00025340723,"threshold_uncertainty_score":0.5511225},"labels":[],"label_agreement":null},{"id":"W1876582780","doi":"10.1186/1471-2229-4-1","title":"Production of Se-methylselenocysteine in transgenic plants expressing selenocysteine methyltransferase","year":2004,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Selenium in Biological Systems","field":"Nursing","cited_by":297,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"National Center for Research Resources; National Cancer Institute; Biological and Environmental Research; National Institutes of Health; U.S. Department of Energy","keywords":"Biology; Selenocysteine; Metabolic engineering; Genetically modified crops; Selenium; Biochemistry; Arabidopsis thaliana; Selenate; Transgene; Botany; Mutant; Enzyme; Chemistry; Cysteine; Gene","score_opus":0.05192408618095064,"score_gpt":0.29357504199739604,"score_spread":0.2416509558164454,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1876582780","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99410486,0.0015507081,0.0010124388,0.00026354834,0.0018540381,0.0007687663,0.0001676165,0.0001562479,0.00012179484],"genre_scores_gemma":[0.99645823,0.000064091975,0.0027410828,0.000062342595,0.0003075974,0.000055465855,0.00026237973,0.000029970055,0.000018839084],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9968311,0.000660423,0.00097113237,0.0007226847,0.00017230515,0.0006423082],"domain_scores_gemma":[0.9989094,0.00033591432,0.00022481644,0.00037487285,0.00005484564,0.000100138444],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0008532448,0.00034492943,0.00080612104,0.00032701413,0.00007501593,0.000009882914,0.00033096393,0.00047198083,0.000032734773],"category_scores_gemma":[0.00022039746,0.0002728944,0.00013526002,0.00039559318,0.00019492727,0.000110217545,0.000025236264,0.00034105816,0.000028125702],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0014284474,0.00021255462,0.015791904,0.00021574234,0.000029324357,0.0000053265853,0.00080715475,0.0005453541,0.9798755,0.00016695156,0.000022224902,0.00089948525],"study_design_scores_gemma":[0.0029510781,0.00079941837,0.0094382195,0.00033497432,0.00003514558,0.00022994692,0.00023414691,0.000033778175,0.98369414,0.0010125978,0.0008288588,0.00040772787],"about_ca_topic_score_codex":0.0011133685,"about_ca_topic_score_gemma":0.0008542004,"teacher_disagreement_score":0.0063536847,"about_ca_system_score_codex":0.00016072228,"about_ca_system_score_gemma":0.000052016076,"threshold_uncertainty_score":0.99997234},"labels":[],"label_agreement":null},{"id":"W1880986852","doi":"10.1186/1471-2229-4-4","title":"Cadmium uptake and translocation in seedlings of near isogenic lines of durum wheat that differ in grain cadmium accumulation","year":2004,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Plant Stress Responses and Tolerance","field":"Agricultural and Biological Sciences","cited_by":98,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"Agriculture and Agri-Food Canada","keywords":"Chromosomal translocation; Cadmium; Biology; Shoot; Xylem; Poaceae; Agronomy; Botany; Horticulture; Chemistry; Biochemistry","score_opus":0.046206408805059565,"score_gpt":0.2578610814346212,"score_spread":0.21165467262956167,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1880986852","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9983179,0.0006201685,0.00001535432,0.00047358402,0.00005760443,0.00016351233,0.00033354273,0.0000081880435,0.000010144997],"genre_scores_gemma":[0.99906677,0.000518928,0.00009354378,0.000034612163,0.000025489522,0.0000067992555,0.00024083059,6.7010984e-7,0.000012374709],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99919844,0.000073959454,0.00029408952,0.00019810352,0.000057810703,0.00017761669],"domain_scores_gemma":[0.9996488,0.000166118,0.00010422424,0.000033940967,0.000016060256,0.000030858766],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014618757,0.00010294294,0.0002516051,0.000034791265,0.000026969266,0.000005652094,0.000089349975,0.00015408298,0.000010137693],"category_scores_gemma":[0.000035913585,0.000045574317,0.000037859772,0.00016457312,0.000076420154,0.000051169667,0.000016963808,0.00007186901,7.645657e-7],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00041967546,0.000066736895,0.39784014,0.000024056899,0.0000038078747,0.000002870668,0.00020799092,0.00024663087,0.59770596,0.00017498036,0.0000025157465,0.0033046224],"study_design_scores_gemma":[0.0005077572,0.00014656223,0.9723133,0.000075310585,0.0000033707086,0.00001792366,0.00006940428,0.0006318113,0.02549173,0.00034343984,0.00030567532,0.00009370029],"about_ca_topic_score_codex":0.0025515684,"about_ca_topic_score_gemma":0.025825199,"teacher_disagreement_score":0.57447314,"about_ca_system_score_codex":0.0000107743945,"about_ca_system_score_gemma":0.000017494953,"threshold_uncertainty_score":0.9919509},"labels":[],"label_agreement":null},{"id":"W1918432312","doi":"10.1186/s12870-015-0592-4","title":"The Mediator complex subunits MED25/PFT1 and MED8 are required for transcriptional responses to changes in cell wall arabinose composition and glucose treatment in Arabidopsis thaliana","year":2015,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Plant Gene Expression Analysis","field":"Biochemistry, Genetics and Molecular Biology","cited_by":29,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Biotechnology and Biological Sciences Research Council; University of Leicester; University of British Columbia; University of Cambridge","keywords":"Biology; Cell biology; Arabidopsis; Transcription factor; Biochemistry; Cell wall; Gene expression; Mutant; Gene","score_opus":0.06263909317147347,"score_gpt":0.28978835724245144,"score_spread":0.22714926407097796,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1918432312","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9950853,0.0016384335,0.00007013531,0.0015550924,0.000059061847,0.00044544396,0.0011075262,0.0000073333554,0.00003168571],"genre_scores_gemma":[0.9960278,0.0012832105,0.0005573505,0.00028716857,0.00006150483,0.00018401412,0.0014259884,0.000010233696,0.00016272171],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99871236,0.00032882424,0.00022653524,0.0003888779,0.00007146402,0.000271955],"domain_scores_gemma":[0.99936134,0.0002078773,0.00008590812,0.00015254543,0.000040748546,0.00015157832],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00034269557,0.00017948831,0.0002646696,0.0001457783,0.000069030335,0.000017374648,0.00012597867,0.0001710465,0.000002408085],"category_scores_gemma":[0.00010226077,0.00012683048,0.00003592389,0.00008913002,0.00009391246,0.0000038825247,0.000046029403,0.000043453816,0.0000016661702],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0023288587,0.00009009685,0.027921462,0.000012539062,0.000027245329,0.00001044705,0.00022834621,0.000010288173,0.9673726,0.000043201802,0.0016130786,0.00034184166],"study_design_scores_gemma":[0.007982002,0.0021553673,0.09815069,0.000078801226,0.00010489763,0.00020983804,0.0016304808,0.001259338,0.7844331,0.00029733602,0.102951415,0.00074669375],"about_ca_topic_score_codex":0.00011873655,"about_ca_topic_score_gemma":0.010783102,"teacher_disagreement_score":0.18293945,"about_ca_system_score_codex":0.000040311043,"about_ca_system_score_gemma":0.00006357351,"threshold_uncertainty_score":0.6017224},"labels":[],"label_agreement":null},{"id":"W1945704435","doi":"10.1186/s12870-015-0584-4","title":"Towards a scientific interpretation of the terroir concept: plasticity of the grape berry metabolome","year":2015,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Horticultural and Viticultural Research","field":"Agricultural and Biological Sciences","cited_by":119,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Grape and Wine Research and Development Corporation; Australian Government; Alberta Water Research Institute","keywords":"Terroir; Metabolome; Vineyard; Biology; Vine; Transcriptome; Metabolomics; Wine; Botany; Biotechnology; Food science; Horticulture; Genetics; Bioinformatics","score_opus":0.06893843870709716,"score_gpt":0.28151051003724636,"score_spread":0.21257207133014921,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1945704435","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9979212,0.00014497215,0.000004316896,0.0006648866,0.00040547742,0.00022825401,0.00038584264,0.000010971865,0.00023405522],"genre_scores_gemma":[0.99951386,0.0000041424482,0.000023798788,0.00004784595,0.000058120488,0.00000911056,0.000055980803,3.8829623e-7,0.000286723],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99876106,0.00029976436,0.00026641286,0.00020498202,0.00024078535,0.0002269957],"domain_scores_gemma":[0.99928993,0.0002160954,0.00016071483,0.000068991205,0.00019486298,0.00006939393],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00029337165,0.00010335206,0.00020689778,0.0000090260555,0.00013778232,0.000021000636,0.00056076836,0.00009189978,0.00005270607],"category_scores_gemma":[0.000555788,0.0000216573,0.00014668946,0.00040475256,0.0007216561,0.000059593305,0.00024487602,0.000120734505,0.0000067119527],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000090044385,0.000056149744,0.019022726,0.000008964025,0.000018511751,1.9945391e-7,0.0005725939,0.0000141714,0.9727537,0.0015814456,0.00067828014,0.005203209],"study_design_scores_gemma":[0.00028766773,0.00041518835,0.72420484,0.00006318353,0.000043041982,0.000024276856,0.001434121,0.0005750027,0.26346037,0.0015015871,0.0078113135,0.00017941733],"about_ca_topic_score_codex":0.00046847382,"about_ca_topic_score_gemma":0.0020209292,"teacher_disagreement_score":0.7092933,"about_ca_system_score_codex":0.00001658698,"about_ca_system_score_gemma":0.00004503617,"threshold_uncertainty_score":0.26589718},"labels":[],"label_agreement":null},{"id":"W1948861846","doi":"10.1186/s12870-015-0636-9","title":"Meta-transcriptomics indicates biotic cross-tolerance in willow trees cultivated on petroleum hydrocarbon contaminated soil","year":2015,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Plant Gene Expression Analysis","field":"Biochemistry, Genetics and Molecular Biology","cited_by":24,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Espace pour la vie; Université de Sherbrooke","funders":"Genome Canada","keywords":"Biology; Abiotic component; Biotic component; Biomass (ecology); Willow; Phytoremediation; Resistance (ecology); Ecology; Contamination","score_opus":0.04027343410435056,"score_gpt":0.27394460763496686,"score_spread":0.2336711735306163,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1948861846","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99723405,0.00092981115,0.00020653493,0.00009032521,0.00022227764,0.00015995986,0.00044395364,0.000042561758,0.0006705198],"genre_scores_gemma":[0.99568254,0.0002251739,0.000171863,0.0004105873,0.000084486805,0.00004234168,0.002633589,0.000027062828,0.0007223524],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9977818,0.00035866763,0.0004818258,0.0007283652,0.00014656573,0.00050277676],"domain_scores_gemma":[0.9990878,0.00006585878,0.00020545746,0.0003949359,0.000059065267,0.00018687187],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00042694854,0.0003695806,0.0006373262,0.0002536064,0.000053555406,0.000028075841,0.0004326585,0.0005005738,0.00001682597],"category_scores_gemma":[0.0001865564,0.00028630788,0.00021572833,0.0002152922,0.00019100048,0.0000068641402,0.000082291794,0.0002203881,0.000040351657],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00083185796,0.00015730302,0.08031298,0.000008877034,0.00047749432,0.000021585269,0.000051304007,0.0028642644,0.91360974,0.000035302473,0.0015878514,0.000041410403],"study_design_scores_gemma":[0.003589678,0.0006790314,0.010581131,0.000033850007,0.00032695607,0.000064666354,0.000084397754,0.006394451,0.961859,0.00007675854,0.015641412,0.00066866603],"about_ca_topic_score_codex":0.00022792227,"about_ca_topic_score_gemma":0.001509572,"teacher_disagreement_score":0.069731854,"about_ca_system_score_codex":0.000041350337,"about_ca_system_score_gemma":0.00013840156,"threshold_uncertainty_score":0.99995893},"labels":[],"label_agreement":null},{"id":"W1949296069","doi":"10.1186/s12870-015-0596-0","title":"Transcriptome analysis of 20 taxonomically related benzylisoquinoline alkaloid-producing plants","year":2015,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Berberine and alkaloids research","field":"Medicine","cited_by":88,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université du Québec à Trois-Rivières; University of Calgary","funders":"Natural Sciences and Engineering Research Council of Canada; Genome Alberta; Government of Alberta; Genome Canada","keywords":"Biology; Benzylisoquinoline; Sanguinarine; Transcriptome; De novo transcriptome assembly; Computational biology; Sequence assembly; Genetics; Gene; Evolutionary biology; Botany; Alkaloid; Biosynthesis; Gene expression","score_opus":0.0865676454605273,"score_gpt":0.32443383999868625,"score_spread":0.23786619453815894,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1949296069","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9954337,0.00074697676,0.00018351169,0.00040177343,0.00014137957,0.0002614659,0.0007081684,0.00005313447,0.0020699028],"genre_scores_gemma":[0.99449545,0.00013534483,0.0012243909,0.0001513476,0.00011069375,0.000012705748,0.0027883062,0.000015703556,0.0010660592],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99828327,0.00012374477,0.00056837674,0.0004361034,0.00016989915,0.00041860162],"domain_scores_gemma":[0.9989252,0.00013351122,0.00012459126,0.00041717122,0.000121318815,0.00027818026],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00054078124,0.00017519732,0.0008262611,0.00066025846,0.000027152233,0.000005688322,0.00018198378,0.00023141666,0.00025380374],"category_scores_gemma":[0.00021967055,0.00013582947,0.0002049587,0.00063492137,0.00014666612,0.0000423313,0.000058144597,0.00027219145,0.000057250654],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0022881923,0.00039899623,0.34726718,0.000087446126,0.0026794344,0.00008456872,0.0005516674,0.00025101227,0.6388807,0.00071676326,0.0051443004,0.0016497266],"study_design_scores_gemma":[0.029722117,0.0090720095,0.49541983,0.0004876121,0.008131174,0.0015624564,0.0016816305,0.030519005,0.198656,0.0009422491,0.22146262,0.00234331],"about_ca_topic_score_codex":0.0005726153,"about_ca_topic_score_gemma":0.00060188497,"teacher_disagreement_score":0.44022474,"about_ca_system_score_codex":0.000047905058,"about_ca_system_score_gemma":0.0002378147,"threshold_uncertainty_score":0.5538965},"labels":[],"label_agreement":null},{"id":"W1964703561","doi":"10.1186/1471-2229-10-272","title":"Habituation to thaxtomin A in hybrid poplar cell suspensions provides enhanced and durable resistance to inhibitors of cellulose synthesis","year":2010,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Plant Disease Resistance and Genetics","field":"Agricultural and Biological Sciences","cited_by":19,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Natural Resources Canada; Canadian Forest Service; Université de Sherbrooke","funders":"Fonds Québécois de la Recherche sur la Nature et les Technologies; Natural Sciences and Engineering Research Council of Canada; McGill University","keywords":"Biology; Cellulose; Habituation; Cell wall; Cell culture; Phytotoxin; Programmed cell death; Plant disease resistance; Cell biology; Biochemistry; Botany; Gene; Apoptosis; Genetics","score_opus":0.010437799920434879,"score_gpt":0.2041266292994308,"score_spread":0.1936888293789959,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1964703561","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9981345,0.00013050903,0.000011451292,0.00049627206,0.00008482341,0.0003761865,0.0004878652,0.000016853917,0.0002615529],"genre_scores_gemma":[0.9986576,0.000058859965,0.000794583,0.00009622071,0.000052722862,0.000045371162,0.00008508201,0.000001110937,0.00020848546],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9989765,0.00008069214,0.000254324,0.0003354169,0.00008082991,0.00027218595],"domain_scores_gemma":[0.999128,0.00053936616,0.00007825784,0.00007264384,0.00003715408,0.00014456888],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00021004444,0.00012923674,0.00023574608,0.00004559373,0.000059169208,0.000014473723,0.00014555083,0.0000940687,0.000035747646],"category_scores_gemma":[0.00025804195,0.00006049348,0.000035506444,0.0002029617,0.00004732815,0.000034186138,0.000057555393,0.00008255673,0.000018780922],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00021596027,0.000060887673,0.018836726,0.000019183262,0.0000020852003,0.0000047331296,0.000042000578,0.0000028950185,0.9788993,0.000094259616,0.00078136934,0.0010406005],"study_design_scores_gemma":[0.000106568805,0.00011346791,0.08156251,0.00006335976,0.00000913705,0.0000033543247,0.000100319754,0.000015890018,0.91286623,0.00032853225,0.0046432773,0.00018733203],"about_ca_topic_score_codex":0.00018596528,"about_ca_topic_score_gemma":0.0483573,"teacher_disagreement_score":0.06603305,"about_ca_system_score_codex":0.000009834852,"about_ca_system_score_gemma":0.000024708355,"threshold_uncertainty_score":0.9690077},"labels":[],"label_agreement":null},{"id":"W1969032914","doi":"10.1186/1471-2229-11-74","title":"Gene expression analysis of flax seed development","year":2011,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Plant Molecular Biology Research","field":"Agricultural and Biological Sciences","cited_by":174,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Agriculture and Agri-Food Canada; University of Saskatchewan; University of Alberta; Biotechnology Research Institute; Plant Biotechnology Institute","funders":"Genome Prairie; Ministry of Agriculture - Saskatchewan; Genome Canada","keywords":"Biology; Linum; Endosperm; Expressed sequence tag; Gene; Cotyledon; Genome; Botany; In silico; Crop; Genetics; Agronomy","score_opus":0.07068398205854749,"score_gpt":0.2527131364965416,"score_spread":0.1820291544379941,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1969032914","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9986875,0.000102162725,0.00007352071,0.000010982774,0.000044354932,0.00009798996,0.00027657233,0.000027559761,0.0006793744],"genre_scores_gemma":[0.9953738,0.000025946814,0.00273865,0.000039985964,0.000026546128,0.000013261546,0.0016870439,4.7102614e-7,0.00009429127],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9988933,0.00019381777,0.0002446849,0.00029547137,0.00008115077,0.00029155987],"domain_scores_gemma":[0.99955016,0.00016491945,0.00010024008,0.00006893762,0.00004120403,0.00007452451],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00028642462,0.00011121717,0.00028857944,0.00006718804,0.00007130255,0.0000031660725,0.00032661576,0.00018628773,0.00048760278],"category_scores_gemma":[0.000045164128,0.00003892269,0.00009705923,0.0004176919,0.000088586865,0.000016709831,0.00014295147,0.00007462775,0.000036668902],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000072672316,0.0000386465,0.32528877,0.0000013860113,0.00009488454,0.0000039486317,0.00004005492,3.5003333e-7,0.6736228,0.00003907583,0.00003472781,0.0007626844],"study_design_scores_gemma":[0.00005212622,0.000090654816,0.53077877,0.0000030678145,0.0000317565,0.0000059310432,0.000020701298,0.000019641822,0.4677825,0.000027485514,0.0011037163,0.00008364778],"about_ca_topic_score_codex":0.00016296262,"about_ca_topic_score_gemma":0.0011820772,"teacher_disagreement_score":0.20584032,"about_ca_system_score_codex":0.000010126482,"about_ca_system_score_gemma":0.000019389292,"threshold_uncertainty_score":0.53389084},"labels":[],"label_agreement":null},{"id":"W1969700823","doi":"10.1186/1471-2229-8-125","title":"ESKIMO1 is a key gene involved in water economy as well as cold acclimation and salt tolerance","year":2008,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Plant Stress Responses and Tolerance","field":"Agricultural and Biological Sciences","cited_by":73,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Institut National de la Recherche Agronomique; Agence Nationale de la Recherche; Agence Universitaire de la Francophonie; European Commission","keywords":"Biology; Acclimatization; Abiotic component; Mutant; Abiotic stress; Transpiration; Drought tolerance; Gene; Wild type; Botany; Genetics; Horticulture; Ecology; Photosynthesis","score_opus":0.025895528131945886,"score_gpt":0.21517049405586752,"score_spread":0.18927496592392162,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1969700823","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99724317,0.00041157214,0.000002252117,0.00066800107,0.00006874996,0.00018363389,0.000178657,0.00002808985,0.0012158973],"genre_scores_gemma":[0.9965533,0.001072375,0.000083785,0.0012936381,0.000097775395,0.000026128182,0.00034721827,8.883504e-7,0.00052491203],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.99896026,0.00009113157,0.00024052175,0.00033813828,0.00004343644,0.0003265161],"domain_scores_gemma":[0.99961513,0.00018267003,0.00006312013,0.00004868452,0.000017532611,0.000072887684],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000096920216,0.00014519478,0.00023664616,0.00002234827,0.00012709573,0.000019590387,0.0001431967,0.00015608234,0.0003939988],"category_scores_gemma":[0.000013639965,0.00005510899,0.000038511545,0.00007001346,0.000078957586,0.00008948453,0.000058183552,0.0000910929,0.00037809357],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000703603,0.000087037515,0.31040528,0.000016201246,0.000010977056,0.00007867196,0.00021101288,0.000011190435,0.6858415,0.00053216505,0.0011997942,0.0009025441],"study_design_scores_gemma":[0.0010595093,0.00055119774,0.29817018,0.000047732283,0.000007634697,0.00044996003,0.000073991076,0.0008709672,0.23851886,0.0014231318,0.45825577,0.0005710701],"about_ca_topic_score_codex":0.00095469516,"about_ca_topic_score_gemma":0.0020496848,"teacher_disagreement_score":0.457056,"about_ca_system_score_codex":0.000013450337,"about_ca_system_score_gemma":0.0000122526335,"threshold_uncertainty_score":0.48597538},"labels":[],"label_agreement":null},{"id":"W1969922305","doi":"10.1186/1471-2229-11-176","title":"Functional characterization of TRICHOMELESS2, a new single-repeat R3 MYB transcription factor in the regulation of trichome patterning in Arabidopsis","year":2011,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Plant Molecular Biology Research","field":"Agricultural and Biological Sciences","cited_by":146,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"Oak Ridge National Laboratory; National Natural Science Foundation of China; UT-Battelle; Northeast Normal University; Battelle; Laboratory Directed Research and Development; Arizona Biomedical Research Commission; U.S. Department of Energy","keywords":"Biology; MYB; Transcription factor; Arabidopsis; Trichome; Gene knockdown; Genetics; Phenotype; Ectopic expression; Cell biology; Mutant; Activator (genetics); Gene; Botany","score_opus":0.09560236545587905,"score_gpt":0.23052788776073554,"score_spread":0.1349255223048565,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1969922305","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9990687,0.000048449572,0.00015315058,0.00008570053,0.00006779414,0.00024861775,0.00024129899,0.0000087118015,0.00007760733],"genre_scores_gemma":[0.99843997,0.00003669564,0.000033088585,0.000032195127,0.000047304024,0.0000091309,0.00137728,7.7903564e-7,0.00002353169],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9986564,0.0004418461,0.0003671535,0.00022366676,0.000109278655,0.00020164475],"domain_scores_gemma":[0.9994804,0.00023948414,0.00017018292,0.00005375939,0.000030188317,0.00002593621],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003464812,0.000102236605,0.000231568,0.00010066306,0.000024205521,0.000004770288,0.00019692405,0.0001854288,0.00018108742],"category_scores_gemma":[0.000060444567,0.000040691077,0.000070694914,0.00044415836,0.00005730423,0.00006473137,0.000018846791,0.000120351775,0.0000036190102],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00023561045,0.00008934981,0.29880983,0.0000058229316,0.0000047890594,9.083541e-7,0.00019538857,9.2731335e-7,0.6943901,0.00005307029,0.0000037752209,0.0062104445],"study_design_scores_gemma":[0.00032211607,0.00029804787,0.9518483,0.000019606696,0.000004661118,0.000013195449,0.000068382586,0.00004583202,0.047066588,0.00013192663,0.00010848845,0.0000728233],"about_ca_topic_score_codex":0.00054100313,"about_ca_topic_score_gemma":0.0014775143,"teacher_disagreement_score":0.6530385,"about_ca_system_score_codex":0.000019392237,"about_ca_system_score_gemma":0.000017865143,"threshold_uncertainty_score":0.19827802},"labels":[],"label_agreement":null},{"id":"W1974982298","doi":"10.1186/1471-2229-13-78","title":"Genetic characterization of a core collection of flax (Linum usitatissimum L.) suitable for association mapping studies and evidence of divergent selection between fiber and linseed types","year":2013,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Phytoestrogen effects and research","field":"Medicine","cited_by":110,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba; Agriculture and Agri-Food Canada","funders":"Comisión Nacional de Investigación Científica y Tecnológica; Genome Prairie; Genome Canada","keywords":"Biology; Linum; Genetic diversity; Population; Association mapping; Genetics; Linkage disequilibrium; Locus (genetics); Allele; Gene; Botany; Haplotype; Genotype; Single-nucleotide polymorphism","score_opus":0.08705807138373467,"score_gpt":0.3374117321242725,"score_spread":0.25035366074053783,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1974982298","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.997634,0.0011253605,0.00051816896,0.000052532592,0.00004023608,0.0005915576,0.000032251035,0.0000042366314,0.0000016711842],"genre_scores_gemma":[0.99769694,0.0006272238,0.0013794008,0.0000037726543,0.000045916637,0.000029547049,0.000042170657,0.000003668837,0.00017138672],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99946827,0.00006549228,0.0002001702,0.0001081443,0.00006119283,0.000096720636],"domain_scores_gemma":[0.9990076,0.0004494406,0.00020603192,0.000034024328,0.00027894808,0.000023984094],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00024553126,0.000053778233,0.0002693884,0.00009642767,0.00004225482,0.0000019562453,0.000015767346,0.00008836507,0.000006463284],"category_scores_gemma":[0.00040563048,0.000040072704,0.00001935114,0.00010628847,0.000045064997,0.00003473729,0.000022783515,0.000036718557,4.125163e-7],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008000541,0.000010482084,0.49694073,0.0006843218,0.000072879615,3.5866414e-8,0.00017587839,0.0000010774245,0.501484,0.000003516785,0.000026602824,0.0005204917],"study_design_scores_gemma":[0.0004770492,0.0010283265,0.9472718,0.00029065847,0.00008602312,0.000003204234,0.00004856109,0.0013272995,0.049292568,0.00011433169,0.000022584522,0.000037544007],"about_ca_topic_score_codex":0.00014717289,"about_ca_topic_score_gemma":0.00002692429,"teacher_disagreement_score":0.4521914,"about_ca_system_score_codex":0.000033073935,"about_ca_system_score_gemma":0.00005029606,"threshold_uncertainty_score":0.16341175},"labels":[],"label_agreement":null},{"id":"W1976461038","doi":"10.1186/1471-2229-14-8","title":"Identification and characterization of CBL and CIPK gene families in canola (Brassica napus L.)","year":2014,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Plant Stress Responses and Tolerance","field":"Agricultural and Biological Sciences","cited_by":158,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"Ministry of Education of the People's Republic of China; Westfälische Wilhelms-Universität Münster; National Natural Science Foundation of China","keywords":"Canola; Biology; Brassica; Identification (biology); Gene; Genetics; Botany","score_opus":0.013118122246974853,"score_gpt":0.20134674580937828,"score_spread":0.18822862356240344,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1976461038","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99921477,0.00009803634,0.00001874871,0.00013429586,0.000047280162,0.00006806865,0.00038160756,0.000008760128,0.000028421176],"genre_scores_gemma":[0.9989008,0.0006124253,0.0000178455,0.000036706293,0.000035679965,0.0000058959663,0.0003501388,2.9574093e-7,0.00004022552],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9994869,0.000086292544,0.00014284928,0.00015673344,0.000028355409,0.00009885698],"domain_scores_gemma":[0.9997006,0.00016281793,0.000078232784,0.000023969074,0.000010719063,0.000023673569],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0000968475,0.000059503334,0.00012634814,0.000017516295,0.00003655607,0.000010031553,0.000052578485,0.00006956244,0.000005785263],"category_scores_gemma":[0.000031540112,0.000024984081,0.000009667453,0.000065438544,0.00005690474,0.000035281846,0.000024629142,0.000030050494,0.0000011699009],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000053455078,0.000009663947,0.116100505,0.000006285752,0.0000014150834,3.0883288e-7,0.000021392461,1.9323862e-7,0.86812174,0.00033765685,0.000002816266,0.015344554],"study_design_scores_gemma":[0.000097111064,0.00006477331,0.9491443,0.000012093755,0.0000021414014,0.000012850567,0.000016082298,0.0003554357,0.04763088,0.000082379986,0.002521217,0.000060732113],"about_ca_topic_score_codex":0.00024989032,"about_ca_topic_score_gemma":0.0014890418,"teacher_disagreement_score":0.8330438,"about_ca_system_score_codex":0.0000026636683,"about_ca_system_score_gemma":0.0000028371992,"threshold_uncertainty_score":0.10188213},"labels":[],"label_agreement":null},{"id":"W1979133410","doi":"10.1186/1471-2229-13-116","title":"Potential link between biotic defense activation and recalcitrance to induction of somatic embryogenesis in shoot primordia from adult trees of white spruce (Picea glauca)","year":2013,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Plant tissue culture and regeneration","field":"Biochemistry, Genetics and Molecular Biology","cited_by":37,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval; Natural Resources Canada; Canadian Forest Service","funders":"Natural Resources Canada; Genome British Columbia; Genome Canada","keywords":"Biology; Somatic embryogenesis; Primordium; Transcriptome; Shoot; Gene expression profiling; Botany; Somatic cell; Embryo; Genotype; Genetics; Gene; Gene expression; Cell biology; Embryogenesis","score_opus":0.01291176459916172,"score_gpt":0.2250472679390182,"score_spread":0.21213550333985648,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1979133410","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99627405,0.00030151682,0.002625143,0.00022203394,0.00009503706,0.00028088875,0.00018504303,0.0000054680963,0.000010829647],"genre_scores_gemma":[0.9962492,0.00010093506,0.0020547307,0.000035685123,0.00026739776,0.000015751208,0.0012120617,0.000007623316,0.000056635174],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9991244,0.00010500018,0.00030935003,0.00027215638,0.000051172145,0.00013791432],"domain_scores_gemma":[0.9995536,0.00002796564,0.00014723395,0.00015246899,0.000071825954,0.000046891982],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00006913107,0.0001254213,0.00024522774,0.00008368346,0.000029040462,0.0000050939225,0.00008729513,0.00028653978,0.0000060088137],"category_scores_gemma":[0.000076504875,0.000103309845,0.000037493355,0.00008881009,0.00005152766,0.000008798821,0.00004477482,0.000052794698,0.0000025651316],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000077848235,0.000017998116,0.11909992,0.000028006436,0.00003132898,2.4397423e-7,0.000116178984,0.000059931393,0.8780334,0.000012950677,0.000050352795,0.002471823],"study_design_scores_gemma":[0.00033963364,0.0001658229,0.3260629,0.000045342676,0.000024911385,0.0000057458114,0.000050896473,0.00005976954,0.6729802,0.000046144753,0.00011091913,0.0001077229],"about_ca_topic_score_codex":0.0011727196,"about_ca_topic_score_gemma":0.0019972923,"teacher_disagreement_score":0.20696296,"about_ca_system_score_codex":0.000008140805,"about_ca_system_score_gemma":0.000044001983,"threshold_uncertainty_score":0.42128533},"labels":[],"label_agreement":null},{"id":"W1980535006","doi":"10.1186/s12870-015-0438-0","title":"X-ray micro-computed tomography in willow reveals tissue patterning of reaction wood and delay in programmed cell death","year":2015,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Bioenergy crop production and management","field":"Agricultural and Biological Sciences","cited_by":43,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal","funders":"Biotechnology and Biological Sciences Research Council","keywords":"Xylem; Biology; Willow; Biomass (ecology); Bioenergy; Botany; Cell biology; Biophysics; Agronomy; Biotechnology; Biofuel","score_opus":0.03215549914351727,"score_gpt":0.22730868711205865,"score_spread":0.19515318796854136,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1980535006","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9989388,0.00028905616,0.000023377266,0.0002581962,0.00013375458,0.00020420001,0.000016169068,0.000023976332,0.00011245333],"genre_scores_gemma":[0.99836385,0.0000603366,0.0012023844,0.0000860721,0.000052218304,0.000015663889,0.00017054912,6.5156485e-7,0.000048265385],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9991377,0.0001398154,0.0002187739,0.00026605948,0.000045149292,0.00019248962],"domain_scores_gemma":[0.99974996,0.000039881546,0.00009693835,0.000039306113,0.000022396382,0.000051491974],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00033170852,0.00009421514,0.00017728235,0.000057645302,0.000019709514,0.000009265929,0.000086960594,0.00010598097,0.0000053540807],"category_scores_gemma":[0.000013793264,0.000041434447,0.000020280924,0.00024261611,0.000038995913,0.000038512626,0.00005267335,0.00007582934,0.000002109116],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000095980125,0.00014228061,0.31378403,0.000017155726,0.0000053678996,0.00000578571,0.000098137,0.000007888159,0.66077554,0.00010023701,0.00018331959,0.024784273],"study_design_scores_gemma":[0.0009299673,0.00084894494,0.9094901,0.00005510605,0.000010369676,0.000028915081,0.0005054982,0.00006251373,0.039549477,0.00043947733,0.047788624,0.00029101365],"about_ca_topic_score_codex":0.0013307438,"about_ca_topic_score_gemma":0.0032425597,"teacher_disagreement_score":0.6212261,"about_ca_system_score_codex":0.000013932864,"about_ca_system_score_gemma":0.0000045133083,"threshold_uncertainty_score":0.20116954},"labels":[],"label_agreement":null},{"id":"W1980706361","doi":"10.1186/1471-2229-11-125","title":"Localization of DIR1 at the tissue, cellular and subcellular levels during Systemic Acquired Resistance in Arabidopsisusing DIR1:GUS and DIR1:EGFP reporters","year":2011,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Plant-Microbe Interactions and Immunity","field":"Agricultural and Biological Sciences","cited_by":49,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Plant Biotechnology Institute; University of Toronto; McMaster University","funders":"Natural Sciences and Engineering Research Council of Canada; McMaster University; U.S. Department of Energy; National Science Foundation","keywords":"Biology; Systemic acquired resistance; Phloem; Pseudomonas syringae; Green fluorescent protein; Cell biology; Signal peptide; Secretion; Arabidopsis; Plant cell; Chromosomal translocation; Fusion protein; Subcellular localization; Intracellular; Cytoplasm; Botany; Microbiology; Pathogen; Mutant; Peptide sequence; Gene; Genetics; Biochemistry","score_opus":0.039419379084696345,"score_gpt":0.21652418843460214,"score_spread":0.1771048093499058,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1980706361","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99710494,0.0021657692,0.000049688006,0.00003151384,0.00011228403,0.00018249711,0.00015355353,0.000016834998,0.00018288898],"genre_scores_gemma":[0.9991903,0.00032646366,0.000041641033,0.000016647495,0.000025961781,0.0000070425403,0.00012901334,0.0000012845012,0.00026166585],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99890625,0.00020620832,0.00036463275,0.0002627947,0.000050633174,0.0002094828],"domain_scores_gemma":[0.9994266,0.00018209819,0.00023446119,0.000091045295,0.000028896671,0.000036888],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00028351336,0.00012974905,0.0002366006,0.000026092332,0.00019908007,0.000015685777,0.00012263976,0.00011727653,0.000045976027],"category_scores_gemma":[0.00004950674,0.000052683536,0.0000276009,0.00012887707,0.00016364358,0.000074828415,0.000110132576,0.0000680113,0.0000024947074],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000118401564,0.000022511393,0.11143706,0.00003757007,0.000009013059,0.000017000939,0.00022452633,0.000001396583,0.88778657,0.000047541263,0.000014251512,0.00028413296],"study_design_scores_gemma":[0.00033322687,0.00013058863,0.5496977,0.00030300222,0.000030787323,0.00043806195,0.0007019743,0.0000866816,0.44515926,0.0001730104,0.0026442397,0.0003014797],"about_ca_topic_score_codex":0.0012110273,"about_ca_topic_score_gemma":0.0056082415,"teacher_disagreement_score":0.44262734,"about_ca_system_score_codex":0.00003018511,"about_ca_system_score_gemma":0.000006125256,"threshold_uncertainty_score":0.31295305},"labels":[],"label_agreement":null},{"id":"W1980886329","doi":"10.1186/1471-2229-14-68","title":"Suppression of the auxin response pathway enhances susceptibility to Phytophthora cinnamomi while phosphite-mediated resistance stimulates the auxin signalling pathway","year":2014,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Plant Pathogens and Resistance","field":"Agricultural and Biological Sciences","cited_by":59,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Department of Environment and Conservation","funders":"Arizona Biomedical Research Commission; Murdoch University; Australian Government","keywords":"Auxin; Biology; Phytophthora cinnamomi; Mutant; Arabidopsis thaliana; Arabidopsis; Phytophthora sojae; F-box protein; Cell biology; Ubiquitin ligase; Biochemistry; Botany; Genetics; Pathogen; Ubiquitin; Phytophthora; Gene","score_opus":0.020658472516262447,"score_gpt":0.21798874735283913,"score_spread":0.19733027483657667,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1980886329","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99519676,0.0004816438,0.000055775126,0.001085149,0.0003511423,0.0004848894,0.0021099097,0.0000554463,0.0001793139],"genre_scores_gemma":[0.99858207,0.000032575488,0.00016479354,0.00026679545,0.00017378482,0.000031451546,0.00017357629,0.0000025740187,0.0005723552],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99675614,0.0013708967,0.000527,0.0005986175,0.00023479454,0.0005125542],"domain_scores_gemma":[0.9956255,0.0035547025,0.00032380526,0.00027002834,0.000109886176,0.00011606266],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001849973,0.00027581636,0.0004212716,0.000019359732,0.00044885237,0.00003396091,0.000863038,0.00024307083,0.00010466687],"category_scores_gemma":[0.0008753521,0.000079798105,0.00017197861,0.00044912338,0.00022459567,0.000049200826,0.00019737147,0.00022903726,0.000024352421],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0017044906,0.00006920855,0.008691862,0.000017550658,0.000008843235,0.0000034221346,0.00006281518,0.000060781673,0.9880153,0.00026644967,0.00047139428,0.00062790763],"study_design_scores_gemma":[0.00029607638,0.00045209678,0.36235005,0.00021721603,0.000013681569,0.000011942091,0.00020269482,0.0003767814,0.58272827,0.0005612698,0.052403796,0.00038614517],"about_ca_topic_score_codex":0.000092098955,"about_ca_topic_score_gemma":0.0047405516,"teacher_disagreement_score":0.40528703,"about_ca_system_score_codex":0.000027561668,"about_ca_system_score_gemma":0.000048794802,"threshold_uncertainty_score":0.34522548},"labels":[],"label_agreement":null},{"id":"W1984159313","doi":"10.1186/1471-2229-14-82","title":"Identification and functional characterization of a flax UDP-glycosyltransferase glucosylating secoisolariciresinol (SECO) into secoisolariciresinol monoglucoside (SMG) and diglucoside (SDG)","year":2014,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Plant-derived Lignans Synthesis and Bioactivity","field":"Biochemistry, Genetics and Molecular Biology","cited_by":68,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Saskatchewan Research Council (Canada); University of Alberta; University of Prince Edward Island; Agriculture and Agri-Food Canada","funders":"Genome Prairie; University of Alberta; Genome Canada","keywords":"Aglycone; Glycosyltransferase; Biochemistry; Biology; Glycosylation; Biosynthesis; Glucuronidation; Uridine diphosphate; Gene; Enzyme; Glycoside; Botany","score_opus":0.009707946875094589,"score_gpt":0.20347733815580363,"score_spread":0.19376939128070902,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1984159313","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.95679504,0.00032160027,0.04192737,0.00007696004,0.00015299185,0.00028712588,0.00035199962,0.000026850208,0.000060070375],"genre_scores_gemma":[0.99711126,0.0004552287,0.00051572366,0.00011681439,0.00018391812,0.000031311327,0.0015197885,0.000024707284,0.000041220817],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99811584,0.0003031467,0.0005069075,0.0006508332,0.00010705547,0.0003162272],"domain_scores_gemma":[0.99906737,0.00015820816,0.00029024348,0.0002933604,0.00008015865,0.00011064317],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0004597136,0.00029122122,0.00037725066,0.00013770195,0.00020241618,0.00004486845,0.00012708211,0.0003741074,0.000012163649],"category_scores_gemma":[0.00015865259,0.00026595886,0.00007604256,0.00009252479,0.00017738089,0.00002785741,0.00010200119,0.0001375698,0.0000035405722],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00029351134,0.00007381834,0.04817287,0.000101635786,0.00005961784,8.0944807e-7,0.00006324846,0.000003027032,0.9445109,0.0003127,0.000019283534,0.006388587],"study_design_scores_gemma":[0.0005383141,0.00026412017,0.2128534,0.000033427776,0.000049845512,0.00007522738,0.00002980041,0.0012445254,0.7832447,0.00017558382,0.0012017965,0.00028926096],"about_ca_topic_score_codex":0.0001523104,"about_ca_topic_score_gemma":0.000572806,"teacher_disagreement_score":0.16468053,"about_ca_system_score_codex":0.000016608654,"about_ca_system_score_gemma":0.00007017637,"threshold_uncertainty_score":0.99997926},"labels":[],"label_agreement":null},{"id":"W1984295746","doi":"10.1186/s12870-014-0387-z","title":"Co-localisation of the blackleg resistance genes Rlm2 and LepR3 on Brassica napus chromosome A10","year":2014,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Plant-Microbe Interactions and Immunity","field":"Agricultural and Biological Sciences","cited_by":48,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Agriculture and Agri-Food Canada","funders":"Bayer CropScience; Agriculture and Agri-Food Canada; Department of Environment and Primary Industries","keywords":"Leptosphaeria maculans; Blackleg; Biology; Canola; Brassica; Genetics; Gene; Locus (genetics); R gene; Chromosome; Brassica rapa; Plant disease resistance; Gene mapping; Botany","score_opus":0.02280516585775911,"score_gpt":0.22519438975181172,"score_spread":0.20238922389405262,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1984295746","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.997459,0.00010101017,0.0000068474646,0.0005064872,0.00018219576,0.00008651794,0.0003894737,0.00001577626,0.001252704],"genre_scores_gemma":[0.99906015,0.00008949706,0.000026928192,0.00020632925,0.00010343052,0.000004186634,0.00015913883,5.001064e-7,0.00034982688],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9992827,0.00021809488,0.00015493017,0.0001622928,0.00004584556,0.0001361202],"domain_scores_gemma":[0.99927366,0.00048707615,0.00011600045,0.00007424627,0.000022717215,0.000026291946],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00016160893,0.00008810951,0.00014020025,0.000009428073,0.00016907799,0.000014138954,0.00017702374,0.000093532755,0.00006280338],"category_scores_gemma":[0.00007552724,0.000028332557,0.000041927025,0.00007228985,0.00014611955,0.000033724566,0.000031728134,0.00009643313,0.00001590042],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000712433,0.000035740384,0.013468326,0.0000056711992,0.0000063931857,1.6700949e-7,0.000016375465,0.0000010663141,0.9800881,0.0015754226,0.0014363686,0.0032951112],"study_design_scores_gemma":[0.00023599436,0.00038527697,0.4030234,0.000070216054,0.000012413834,0.000041440777,0.00008989426,0.000085430875,0.27478978,0.0007684668,0.32029772,0.00020000152],"about_ca_topic_score_codex":0.00023604366,"about_ca_topic_score_gemma":0.0028736265,"teacher_disagreement_score":0.70529836,"about_ca_system_score_codex":0.000010060551,"about_ca_system_score_gemma":0.0000062145377,"threshold_uncertainty_score":0.1603551},"labels":[],"label_agreement":null},{"id":"W1984951050","doi":"10.1186/1471-2229-10-273","title":"Gene family structure, expression and functional analysis of HD-Zip III genes in angiosperm and gymnosperm forest trees","year":2010,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Plant Molecular Biology Research","field":"Agricultural and Biological Sciences","cited_by":72,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta; Laurentian University; Université Laval","funders":"Fonds Québécois de la Recherche sur la Nature et les Technologies; Canada's Michael Smith Genome Sciences Centre; Genome Canada","keywords":"Gymnosperm; Biology; Xylem; Cambium; Populus trichocarpa; Gene family; Botany; Vascular cambium; Phylogenetic tree; Gene; White (mutation); Woody plant; Leucine zipper; Gene expression; Genetics; Transcription factor","score_opus":0.02405599434801365,"score_gpt":0.23471258235860534,"score_spread":0.2106565880105917,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1984951050","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9980253,0.0007084598,0.000006909658,0.000051657153,0.00007210946,0.0001178285,0.0009705486,0.000011975433,0.000035208635],"genre_scores_gemma":[0.99792224,0.0002735918,0.00023443106,0.000047018308,0.00006994444,0.0000068580434,0.00142791,7.621924e-7,0.00001723705],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9989502,0.00010916514,0.00021617167,0.00038035636,0.00008566126,0.00025849076],"domain_scores_gemma":[0.99941397,0.00033627937,0.000075525415,0.000064349966,0.00003106571,0.00007881849],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00018726318,0.00013744408,0.00033238903,0.00010150238,0.00007521047,0.00001227311,0.00013766863,0.00028538,0.00008482392],"category_scores_gemma":[0.00004340641,0.000054152566,0.000058617985,0.00031442597,0.0002472592,0.000032641605,0.00013840506,0.00015910983,8.2942364e-7],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007191152,0.000012812931,0.4626508,0.0000011822094,0.00003169346,0.0000029562261,0.0000062235335,0.0000034148597,0.5361244,0.000103913284,0.000013611044,0.000977046],"study_design_scores_gemma":[0.00021978813,0.00011454404,0.9594251,0.0000034068676,0.00004042177,0.000036300426,0.000030769424,0.00030478984,0.03919744,0.00026245063,0.00025137933,0.000113628244],"about_ca_topic_score_codex":0.0005952636,"about_ca_topic_score_gemma":0.039754596,"teacher_disagreement_score":0.496927,"about_ca_system_score_codex":0.0000042619668,"about_ca_system_score_gemma":0.000011363344,"threshold_uncertainty_score":0.9777674},"labels":[],"label_agreement":null},{"id":"W1985079260","doi":"10.1186/1471-2229-8-81","title":"Comprehensive analysis of single-repeat R3 MYB proteins in epidermal cell patterning and their transcriptional regulation in Arabidopsis","year":2008,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Plant Molecular Biology Research","field":"Agricultural and Biological Sciences","cited_by":152,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"University of Missouri","keywords":"MYB; Biology; Arabidopsis; Transcription factor; Genetics; Gene; Enhancer; Trichome; Cell biology; Mutant; Botany","score_opus":0.05905275683417239,"score_gpt":0.23419994663218333,"score_spread":0.17514718979801094,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1985079260","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99875945,0.0003380011,0.00004963892,0.00013175291,0.000016356773,0.00021202657,0.00040816874,0.0000098321025,0.00007475256],"genre_scores_gemma":[0.99845123,0.00008221961,0.000099942234,0.00005808031,0.00001910049,0.000011230379,0.0012647096,6.3204413e-7,0.000012862938],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9986334,0.00042638034,0.0002946924,0.00031989167,0.000064357955,0.0002612632],"domain_scores_gemma":[0.9993629,0.00043476955,0.00008698838,0.000044963344,0.000030312614,0.000040053725],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00018892987,0.00012234395,0.0003587153,0.00014188362,0.00005182003,0.00000405565,0.00012307349,0.00017463171,0.000054491655],"category_scores_gemma":[0.000024218556,0.00005269435,0.000094745476,0.00047604728,0.00017000984,0.000034975954,0.00004181828,0.00012557012,0.0000017542286],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007077841,0.00005129436,0.4246114,0.0000046594787,0.00002090351,0.000007958502,0.00007173856,0.00007282727,0.5745629,0.000011108466,0.0000026496832,0.00051177514],"study_design_scores_gemma":[0.00023839228,0.00018008702,0.9740707,0.0000118257385,0.000012272919,0.000043261673,0.000083418294,0.0011994916,0.023806304,0.000050354756,0.00019674638,0.000107090484],"about_ca_topic_score_codex":0.0006976407,"about_ca_topic_score_gemma":0.00478341,"teacher_disagreement_score":0.55075663,"about_ca_system_score_codex":0.000018476765,"about_ca_system_score_gemma":0.000010752532,"threshold_uncertainty_score":0.2669255},"labels":[],"label_agreement":null},{"id":"W1985615922","doi":"10.1186/1471-2229-11-43","title":"Transcriptome mining, functional characterization, and phylogeny of a large terpene synthase gene family in spruce (Piceaspp.)","year":2011,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Plant biochemistry and biosynthesis","field":"Biochemistry, Genetics and Molecular Biology","cited_by":149,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia; Canada's Michael Smith Genome Sciences Centre","funders":"Natural Sciences and Engineering Research Council of Canada; Genome British Columbia; Genome Canada","keywords":"Biology; Diterpene; Gymnosperm; Botany; Terpene; Context (archaeology); Transcriptome; Terpenoid; Oleoresin; Gene; Genetics; Biochemistry; Gene expression","score_opus":0.025573270854216325,"score_gpt":0.2172353339988046,"score_spread":0.19166206314458828,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1985615922","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99577385,0.0005206438,0.0011091551,0.00001042,0.000108678694,0.00011488964,0.0021615184,0.000009426835,0.0001914019],"genre_scores_gemma":[0.9963284,0.0002708864,0.0006459581,0.0001712784,0.0000980812,0.000017405626,0.0023394942,0.0000105004965,0.00011796852],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9988906,0.00008086197,0.0003016303,0.00039818295,0.000053027823,0.00027571546],"domain_scores_gemma":[0.99956185,0.000023946146,0.0001200918,0.00018875516,0.000034642922,0.000070700735],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00020010622,0.00018457933,0.00024088078,0.000073450174,0.00003685236,0.000004055992,0.00014509488,0.00029390142,0.000047034566],"category_scores_gemma":[0.000051252897,0.00016572302,0.000058395213,0.00007500283,0.000109997745,0.0000047992644,0.000057291625,0.000059753747,0.0000028663276],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005730144,0.00015197688,0.07498849,0.00003315511,0.00003900307,0.000007109098,0.000053190102,1.228213e-7,0.92383325,0.000077602745,0.00006137027,0.00018170246],"study_design_scores_gemma":[0.0005610616,0.00014820466,0.22074512,0.000018722518,0.000018417917,0.000080577214,0.000039426868,0.000014787941,0.77509564,0.000008365157,0.0030933735,0.00017628323],"about_ca_topic_score_codex":0.000027607552,"about_ca_topic_score_gemma":0.00007147346,"teacher_disagreement_score":0.1487376,"about_ca_system_score_codex":0.000005143651,"about_ca_system_score_gemma":0.00006245286,"threshold_uncertainty_score":0.67579883},"labels":[],"label_agreement":null},{"id":"W1986753167","doi":"10.1186/1471-2229-11-168","title":"Characterization of Sucrose transporter alleles and their association with seed yield-related traits in Brassica napus L","year":2011,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Plant nutrient uptake and metabolism","field":"Agricultural and Biological Sciences","cited_by":31,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Huazhong Agricultural University; National Natural Science Foundation of China; University of Guelph; National Science Foundation","keywords":"Biology; Genetics; Allele; Brassica; Single-nucleotide polymorphism; Gene; Population; Genotype; Botany","score_opus":0.023270167191997787,"score_gpt":0.17286477054888355,"score_spread":0.14959460335688576,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1986753167","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9989159,0.00008576035,0.0000061803594,0.00006664689,0.00004839314,0.00014276394,0.00056320895,0.000020315149,0.0001508315],"genre_scores_gemma":[0.99870694,0.000343447,0.000020421197,0.00005330015,0.000023752305,0.0000066142056,0.00076197553,6.425687e-7,0.00008291764],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9993558,0.00006228008,0.00019996979,0.00017009505,0.00003915041,0.00017270933],"domain_scores_gemma":[0.9996686,0.00011120222,0.00014673873,0.000018690593,0.000020497928,0.000034290795],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015271454,0.00009891877,0.00021660389,0.00002061709,0.000028497194,0.0000043708087,0.00007121078,0.00017698546,0.00004398069],"category_scores_gemma":[0.000013455364,0.000034411918,0.000025816544,0.00012122026,0.000032012693,0.000065556495,0.00000728764,0.0000701662,0.0000016553076],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010901839,0.000051139767,0.31467882,0.0000021323165,0.000010056107,0.0000010994002,0.00035024883,2.4733994e-8,0.6818609,0.00020619082,0.0000026349244,0.0027277186],"study_design_scores_gemma":[0.00026065705,0.00016183118,0.9420672,0.000019010644,0.000008452469,0.000009669403,0.00006547504,0.000006783279,0.05498946,0.00008235436,0.002238983,0.00009010267],"about_ca_topic_score_codex":0.00014630824,"about_ca_topic_score_gemma":0.0022507485,"teacher_disagreement_score":0.6273884,"about_ca_system_score_codex":0.0000053714057,"about_ca_system_score_gemma":0.000006692625,"threshold_uncertainty_score":0.14032774},"labels":[],"label_agreement":null},{"id":"W1987126204","doi":"10.1186/1471-2229-10-67","title":"Genetic transformation of cotton with a harpin-encoding gene hpa Xoo confers an enhanced defense response against different pathogens through a priming mechanism","year":2010,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Plant-Microbe Interactions and Immunity","field":"Agricultural and Biological Sciences","cited_by":75,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Agriculture and Agri-Food Canada","funders":"National High-tech Research and Development Program","keywords":"Verticillium dahliae; Biology; Verticillium wilt; Gossypium; Conidium; Transformation (genetics); Inoculation; Plant disease resistance; Genetically modified crops; Microbiology; Botany; Gene; Horticulture; Transgene; Genetics","score_opus":0.029013337950956293,"score_gpt":0.2330802539474308,"score_spread":0.2040669159964745,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1987126204","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9972649,0.0000148198915,0.0013314676,0.000056471777,0.00018839086,0.00026903008,0.0007156155,0.000043389606,0.00011586901],"genre_scores_gemma":[0.9977889,0.0000775334,0.0013765593,0.000095000076,0.00004591595,0.000020650812,0.00058328395,0.0000016711112,0.000010456799],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99882,0.00027436603,0.00030608822,0.0002464244,0.00007314161,0.00027998321],"domain_scores_gemma":[0.9992898,0.0003032024,0.00017890928,0.00009588562,0.00006650611,0.00006569332],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00021439744,0.00018040759,0.0002587147,0.00002863928,0.00020176053,0.000025766674,0.00019981305,0.0001703052,0.000069260364],"category_scores_gemma":[0.000040439227,0.00007184843,0.00006745998,0.000092077906,0.00008423361,0.00012490358,0.000027464526,0.00021694838,0.0000057258967],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0009864869,0.000100905556,0.00059735274,0.000007690612,0.000015565454,0.0000033338467,0.0006196645,0.000004578822,0.9950497,0.0003277299,0.0000024557028,0.0022845357],"study_design_scores_gemma":[0.00035980198,0.0009790154,0.031912245,0.000038290083,0.000023960347,0.0001539479,0.0008164857,0.0002596032,0.96445036,0.00015190418,0.00062675524,0.00022761925],"about_ca_topic_score_codex":0.00025841655,"about_ca_topic_score_gemma":0.003987403,"teacher_disagreement_score":0.03131489,"about_ca_system_score_codex":0.000018527666,"about_ca_system_score_gemma":0.000024880934,"threshold_uncertainty_score":0.2929894},"labels":[],"label_agreement":null},{"id":"W1987576890","doi":"10.1186/1471-2229-9-78","title":"Agrobacterium rhizogenes-mediated transformation of Superroot-derived Lotus corniculatus plants: a valuable tool for functional genomics","year":2009,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Plant tissue culture and regeneration","field":"Biochemistry, Genetics and Molecular Biology","cited_by":88,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"University of Miyazaki; Institute of Genetics; Norges Teknisk-Naturvitenskapelige Universitet; National Natural Science Foundation of China; Chinese Academy of Sciences; University of Missouri","keywords":"Lotus corniculatus; Biology; Agrobacterium; Transformation (genetics); Functional genomics; Transformation efficiency; Botany; Genetics; Gene; Genomics; Genome","score_opus":0.021516301983533288,"score_gpt":0.22897226629094253,"score_spread":0.20745596430740923,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1987576890","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98135287,0.0010776991,0.014816599,0.000101506805,0.0002958703,0.00041842295,0.0018453649,0.000019230389,0.00007246573],"genre_scores_gemma":[0.9638065,0.00043680798,0.00084642385,0.00020402746,0.00032778666,0.000031828557,0.034208182,0.000010206814,0.00012819929],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9990419,0.000056289744,0.0003251069,0.00027081734,0.000055661807,0.00025020953],"domain_scores_gemma":[0.99956685,0.000030615756,0.000118197735,0.0001542581,0.000081652455,0.000048403173],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013530238,0.00017216019,0.00022712315,0.000050079827,0.00007983966,0.000008856682,0.00010801452,0.00032581444,0.000012982182],"category_scores_gemma":[0.000042579046,0.00013972048,0.000108945555,0.000039594448,0.000042103744,0.000008024526,0.000011710305,0.000048254813,0.0000064700994],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0008181538,0.000059372844,0.0006728588,0.000022487151,0.000051604697,6.073211e-7,0.000051287203,0.00024617507,0.99540997,0.00019019222,0.0019820214,0.0004952945],"study_design_scores_gemma":[0.0016366227,0.00082626875,0.007355115,0.000014043278,0.000043315114,0.0001552225,0.000036448473,0.00061674294,0.9266107,0.00005418244,0.062375247,0.00027605944],"about_ca_topic_score_codex":0.000024223615,"about_ca_topic_score_gemma":0.00025500017,"teacher_disagreement_score":0.06879921,"about_ca_system_score_codex":0.000019795274,"about_ca_system_score_gemma":0.00018025625,"threshold_uncertainty_score":0.56976354},"labels":[],"label_agreement":null},{"id":"W1989214197","doi":"10.1186/1471-2229-13-39","title":"Genetic diversity and population structure assessed by SSR and SNP markers in a large germplasm collection of grape","year":2013,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Horticultural and Viticultural Research","field":"Agricultural and Biological Sciences","cited_by":376,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University","funders":"Ministerio de Ciencia e Innovación; Fondazione Edmund Mach","keywords":"Germplasm; Biology; Genetic diversity; Domestication; Microsatellite; Population; Biotechnology; Genetics; Botany; Allele; Gene","score_opus":0.03112871043581438,"score_gpt":0.2496062223527458,"score_spread":0.2184775119169314,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1989214197","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9992666,0.000118718664,7.8884665e-7,0.00012791298,0.000027120592,0.00023780836,0.00019546223,0.000009448195,0.000016136006],"genre_scores_gemma":[0.99952734,0.00013871757,0.00004618243,0.000028448061,0.000017266813,0.000006040505,0.00018409043,3.0708978e-7,0.000051592608],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9992806,0.000113749426,0.00013375867,0.00019780528,0.000067566754,0.00020653398],"domain_scores_gemma":[0.99969333,0.00014193082,0.00005036192,0.000018048455,0.00003405122,0.00006226578],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000072198076,0.0000860097,0.00014981646,0.00001577561,0.00021001471,0.000015119547,0.0000625556,0.00012585505,0.0001209201],"category_scores_gemma":[0.00004492299,0.000030401863,0.000018684777,0.00015759462,0.00005149341,0.00007601589,0.00014885352,0.00007703298,0.0000011972718],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000027685506,0.000013375942,0.6964968,0.000007857376,0.0000038814724,3.746016e-7,0.000033859502,1.5250295e-7,0.30152664,0.000028521546,0.00016500826,0.0016959026],"study_design_scores_gemma":[0.00018936205,0.00017490743,0.99814534,0.0000069649004,0.000004297885,0.000012311198,0.00014823899,0.00019118022,0.00061237265,0.0003103824,0.00012403158,0.00008061262],"about_ca_topic_score_codex":0.0070796898,"about_ca_topic_score_gemma":0.011351764,"teacher_disagreement_score":0.3016486,"about_ca_system_score_codex":0.000013068493,"about_ca_system_score_gemma":0.0000024278354,"threshold_uncertainty_score":0.9995322},"labels":[],"label_agreement":null},{"id":"W1989611794","doi":"10.1186/1471-2229-8-47","title":"An extensive (co-)expression analysis tool for the cytochrome P450 superfamily in Arabidopsis thaliana","year":2008,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Plant Gene Expression Analysis","field":"Biochemistry, Genetics and Molecular Biology","cited_by":123,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Agence Nationale de la Recherche; European Commission","keywords":"Biology; Arabidopsis thaliana; Secondary metabolism; Computational biology; Arabidopsis; Gene expression profiling; Cytochrome P450; DNA microarray; Gene; Function (biology); Gene expression; Genetics; Enzyme; Biochemistry; Mutant","score_opus":0.030051384002398183,"score_gpt":0.292022344972918,"score_spread":0.2619709609705198,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1989611794","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98732316,0.00049967435,0.010445442,0.000069477814,0.00006999423,0.000371731,0.0010804214,0.000021401698,0.00011867263],"genre_scores_gemma":[0.9923514,0.0006703823,0.0016416108,0.00052432186,0.00024108039,0.00013939198,0.0040253624,0.000020328725,0.00038608426],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99797356,0.00029802197,0.00040617498,0.00074153417,0.000121702826,0.0004589951],"domain_scores_gemma":[0.9986453,0.00022182881,0.00014711233,0.0007981404,0.000090760055,0.000096876836],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003707485,0.00027239742,0.0004627188,0.00026223378,0.00022372042,0.00001608513,0.0005430482,0.00035259622,0.00005837422],"category_scores_gemma":[0.00020388016,0.00018295414,0.0003298089,0.00035314535,0.00016583203,0.000008405627,0.00008830352,0.00012629389,0.000016854856],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00035721224,0.00007673437,0.069839194,0.00000533997,0.00025170782,0.00001239762,0.0000541054,0.00095437816,0.9179123,0.000016377096,0.010427155,0.00009308604],"study_design_scores_gemma":[0.001839335,0.0005911728,0.25400794,0.00002050994,0.0005393549,0.00017744412,0.00034771187,0.006826879,0.69958276,0.000061210456,0.035132907,0.00087281194],"about_ca_topic_score_codex":0.0001399683,"about_ca_topic_score_gemma":0.00061793224,"teacher_disagreement_score":0.21832958,"about_ca_system_score_codex":0.00002023834,"about_ca_system_score_gemma":0.000107820204,"threshold_uncertainty_score":0.7460653},"labels":[],"label_agreement":null},{"id":"W1996146208","doi":"10.1186/1471-2229-12-135","title":"CCS52A2/FZR1, a cell cycle regulator, is an essential factor for shoot apical meristem maintenance in Arabidopsis thaliana","year":2012,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Plant Molecular Biology Research","field":"Agricultural and Biological Sciences","cited_by":22,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Agriculture and Agri-Food Canada","funders":"Division of Integrative Organismal Systems; Higher Education Discipline Innovation Project; National Science Foundation","keywords":"Biology; Meristem; Arabidopsis thaliana; Regulator; Shoot; Botany; Arabidopsis; Cell biology; Mutant; Genetics; Gene","score_opus":0.04334398363834954,"score_gpt":0.27330415939524566,"score_spread":0.22996017575689612,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1996146208","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9958786,0.00032353346,0.00008132216,0.00042711233,0.00024100872,0.00045810797,0.0023517844,0.00004898807,0.00018954229],"genre_scores_gemma":[0.9976761,0.000034833938,0.00041227648,0.00030171324,0.00036210445,0.00007598067,0.00085792656,0.000002794723,0.00027631846],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99764395,0.0003483283,0.00032071694,0.0005436758,0.00011753968,0.0010257645],"domain_scores_gemma":[0.9990995,0.00037412054,0.00010194927,0.00013271114,0.000040074952,0.0002516724],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00041545706,0.00023714014,0.00038178702,0.000037407706,0.00012664206,0.000023940222,0.00048700976,0.00042908097,0.0002727167],"category_scores_gemma":[0.00008446473,0.00010001594,0.00013758897,0.00018942863,0.00016877882,0.00010027748,0.00011702012,0.0002004219,0.000073103],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00037339947,0.0002646475,0.25297162,0.000017747729,0.000016450349,0.0000075559565,0.00010807385,5.656256e-7,0.7422164,0.00056237786,0.0012084044,0.0022527364],"study_design_scores_gemma":[0.0013680145,0.0012541328,0.81851816,0.000039142273,0.000028509749,0.00022126439,0.0004938469,0.0006123747,0.12786435,0.0007071693,0.0478649,0.0010281216],"about_ca_topic_score_codex":0.00027939526,"about_ca_topic_score_gemma":0.0015277282,"teacher_disagreement_score":0.61435205,"about_ca_system_score_codex":0.000040363517,"about_ca_system_score_gemma":0.000024721461,"threshold_uncertainty_score":0.40785316},"labels":[],"label_agreement":null},{"id":"W1997930876","doi":"10.1186/1471-2229-13-42","title":"Promzea: a pipeline for discovery of co-regulatory motifs in maize and other plant species and its application to the anthocyanin and phlobaphene biosynthetic pathways and the Maize Development Atlas","year":2013,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Plant Gene Expression Analysis","field":"Biochemistry, Genetics and Molecular Biology","cited_by":22,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; University of Guelph","funders":"Norges Teknisk-Naturvitenskapelige Universitet","keywords":"Biology; In silico; Computational biology; Genome; Gene; Motif (music); Cis-regulatory module; Genetics; Transcription factor","score_opus":0.014683519297963334,"score_gpt":0.22661065419516158,"score_spread":0.21192713489719825,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1997930876","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99511826,0.0012813981,0.0017060784,0.0002644293,0.000019582503,0.00087595533,0.00069398875,0.0000042232978,0.00003611228],"genre_scores_gemma":[0.9981749,0.00042684536,0.000570637,0.00020747198,0.000042500153,0.00019251103,0.00020818991,0.000009778033,0.00016718765],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9990252,0.000102034304,0.0002698024,0.0003607566,0.000054379845,0.00018781122],"domain_scores_gemma":[0.9994745,0.00015595551,0.00011841414,0.00017622164,0.000023661747,0.000051237195],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00040036265,0.00016093312,0.00026069695,0.000057882302,0.00007731466,0.00002112936,0.00011851822,0.000119905555,0.0000032106877],"category_scores_gemma":[0.00008559097,0.0000879684,0.000024196597,0.000047385376,0.00019459137,0.000005276572,0.00015443248,0.000044844164,0.0000013600645],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00035397458,0.000025378838,0.010222258,0.000041704265,0.000037434467,2.4867336e-7,0.00022686545,0.0000057715156,0.98684627,0.00077966216,0.0008188472,0.00064159],"study_design_scores_gemma":[0.0028715604,0.00018213323,0.037831876,0.00008392299,0.00006597483,0.00013455136,0.0006435809,0.0041576987,0.92018265,0.0003960954,0.033031758,0.0004182003],"about_ca_topic_score_codex":0.000048794118,"about_ca_topic_score_gemma":0.00055018504,"teacher_disagreement_score":0.066663615,"about_ca_system_score_codex":0.0000062618983,"about_ca_system_score_gemma":0.00003565753,"threshold_uncertainty_score":0.3587247},"labels":[],"label_agreement":null},{"id":"W1998228459","doi":"10.1186/1471-2229-8-5","title":"Quantitative 1H NMR metabolomics reveals extensive metabolic reprogramming of primary and secondary metabolism in elicitor-treated opium poppy cell cultures","year":2008,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Berberine and alkaloids research","field":"Medicine","cited_by":115,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research; University of Calgary","keywords":"Elicitor; Metabolomics; Metabolome; Biology; Secondary metabolism; Metabolic pathway; Alkaloid; Biochemistry; Opium Poppy; Poppy; Primary metabolite; Sanguinarine; Metabolism; Papaver; Metabolite; Botany; Biosynthesis; Bioinformatics","score_opus":0.0463296267205797,"score_gpt":0.3136174462234815,"score_spread":0.26728781950290176,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1998228459","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9629453,0.03493824,0.000039003706,0.00010820988,0.00008268505,0.00058872654,0.000257232,0.00003676041,0.0010038607],"genre_scores_gemma":[0.9602875,0.018839212,0.017976621,0.0005098028,0.00022504415,0.000077030316,0.0008515273,0.000043764194,0.0011894901],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.997814,0.00038341124,0.00059213786,0.0005510317,0.00016062733,0.0004987827],"domain_scores_gemma":[0.9986798,0.0004025689,0.00020759783,0.00032504855,0.00022517784,0.00015978103],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00043517767,0.0002769743,0.0012417651,0.00037043914,0.000072745526,0.0000071704912,0.00013646326,0.00026318867,0.000030277131],"category_scores_gemma":[0.00035007726,0.000203809,0.00012883067,0.00038354748,0.00039584434,0.00008893273,0.0001427516,0.0004521749,0.000010028339],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0014499028,0.00029413405,0.13873425,0.0002812197,0.00021471403,0.00022692775,0.00078651594,0.0000020970488,0.85173064,0.002235016,0.0013703565,0.0026742464],"study_design_scores_gemma":[0.0060493667,0.00089454226,0.79157794,0.00011963206,0.00030358712,0.0013047338,0.0010959852,0.00009150361,0.15771477,0.00031590057,0.039981235,0.0005508211],"about_ca_topic_score_codex":0.0014023387,"about_ca_topic_score_gemma":0.00017908092,"teacher_disagreement_score":0.69401586,"about_ca_system_score_codex":0.000021618249,"about_ca_system_score_gemma":0.00022791371,"threshold_uncertainty_score":0.831109},"labels":[],"label_agreement":null},{"id":"W1999948884","doi":"10.1186/1471-2229-12-175","title":"Transcriptomic and metabolomic analysis of Yukon Thellungiella plants grown in cabinets and their natural habitat show phenotypic plasticity","year":2012,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Plant Stress Responses and Tolerance","field":"Agricultural and Biological Sciences","cited_by":48,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Université Laval; University of Waterloo; McMaster University; University of Guelph","funders":"Agriculture and Agri-Food Canada; Natural Sciences and Engineering Research Council of Canada","keywords":"Biology; Osmolyte; Metabolomics; Proline; Drought stress; Botany; Transcriptome; Abiotic stress; Abiotic component; Horticulture; Ecology; Gene; Gene expression; Genetics","score_opus":0.01915698639781414,"score_gpt":0.21231775274288656,"score_spread":0.19316076634507243,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1999948884","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9920657,0.005771021,0.000011601897,0.000050679,0.00010510889,0.00011233788,0.0018317573,0.00001412439,0.000037648282],"genre_scores_gemma":[0.9987741,0.0007956408,0.000029951992,0.000049364724,0.000046013793,0.0000052394967,0.0002822863,7.9538205e-7,0.000016600627],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.998935,0.0001748856,0.00023416159,0.00025444158,0.00004734023,0.00035418474],"domain_scores_gemma":[0.9990509,0.00073457486,0.00008851708,0.00003646815,0.000009165809,0.00008036901],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00016323254,0.00017766534,0.00048795654,0.0000729175,0.000055042823,0.000010416918,0.00012470134,0.00013233574,0.00002965321],"category_scores_gemma":[0.000030191175,0.00006519792,0.00007228975,0.00021115235,0.00012166484,0.00007105154,0.00004048656,0.00011714698,0.000001295986],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006008849,0.000050930325,0.5017579,0.000010110837,0.00011187203,0.000001237873,0.0001649474,0.000013713326,0.4932626,0.0002477437,0.000011721578,0.0037663262],"study_design_scores_gemma":[0.00024251836,0.00006894216,0.9910773,0.000013331002,0.000074484415,0.00002539902,0.0001158593,0.0023460602,0.0053945174,0.000057993286,0.00042912646,0.0001544702],"about_ca_topic_score_codex":0.00048511673,"about_ca_topic_score_gemma":0.011236933,"teacher_disagreement_score":0.48931938,"about_ca_system_score_codex":0.0000071437594,"about_ca_system_score_gemma":0.000004934327,"threshold_uncertainty_score":0.62704724},"labels":[],"label_agreement":null},{"id":"W2000866919","doi":"10.1186/1471-2229-9-93","title":"Identification of three wheat globulin genes by screening a Triticum aestivum BAC genomic library with cDNA from a diabetes-associated globulin","year":2009,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Wheat and Barley Genetics and Pathology","field":"Agricultural and Biological Sciences","cited_by":29,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ottawa Hospital; Health Canada; University of Ottawa","funders":"Agriculture and Agri-Food Canada; Natural Sciences and Engineering Research Council of Canada","keywords":"Biology; Endosperm; Gene; Complementary DNA; Globulin; cDNA library; Genetics; Aleurone; Expressed sequence tag; Immunology","score_opus":0.017272338476992766,"score_gpt":0.19588562512867294,"score_spread":0.17861328665168016,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2000866919","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9935076,0.0024354323,0.00011904635,0.0007970345,0.00008647428,0.00021233452,0.0027061645,0.0000633545,0.00007251855],"genre_scores_gemma":[0.9950478,0.00019100834,0.0005245318,0.00025200378,0.00017314458,0.000009630228,0.003733062,0.000001903128,0.00006690966],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99859536,0.00016728185,0.00038393555,0.00040679247,0.00008277168,0.0003638612],"domain_scores_gemma":[0.9993678,0.0002265667,0.00020088808,0.00008776516,0.000031847696,0.000085186824],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00016059619,0.0001951454,0.00036369413,0.000020066233,0.00011493027,0.00002760609,0.0003014831,0.0002602246,0.00010557819],"category_scores_gemma":[0.000020422287,0.000082547434,0.00008186421,0.00019728707,0.000099584555,0.00006118904,0.00004852443,0.000100579105,0.0000135],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011562944,0.000091480564,0.19199854,0.0000021986634,0.000019244098,0.0000025152192,0.000009850711,0.000004073746,0.7947664,0.00004551314,0.0003917851,0.012552765],"study_design_scores_gemma":[0.00059263443,0.0014642169,0.89301825,0.000040808987,0.000056747078,0.000008443456,0.00003572361,0.00039160237,0.10029921,0.0017180443,0.0020389438,0.00033535884],"about_ca_topic_score_codex":0.00016889661,"about_ca_topic_score_gemma":0.0006537568,"teacher_disagreement_score":0.7010197,"about_ca_system_score_codex":0.000008267573,"about_ca_system_score_gemma":0.000016731507,"threshold_uncertainty_score":0.33661866},"labels":[],"label_agreement":null},{"id":"W2002740676","doi":"10.1186/1471-2229-12-4","title":"Triacylglycerol synthesis by PDAT1 in the absence of DGAT1 activity is dependent on re-acylation of LPC by LPCAT2","year":2012,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Lipid metabolism and biosynthesis","field":"Biochemistry, Genetics and Molecular Biology","cited_by":87,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Plant Biotechnology Institute","funders":"National Research Council Canada; Genome Prairie; Svenska Forskningsrådet Formas; National Science Foundation; Vetenskapsrådet; Genome Canada","keywords":"Silique; Arabidopsis; Biology; Mutant; Arabidopsis thaliana; Phenotype; Acyl-CoA; Gene; Biosynthesis; Wild type; Biochemistry; Gene expression; Genetics; Enzyme","score_opus":0.021906471809325107,"score_gpt":0.25854501814102815,"score_spread":0.23663854633170303,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2002740676","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9969974,0.0011166072,0.00016827432,0.000099228426,0.00014275538,0.00019825957,0.00094694976,0.000003965451,0.00032656203],"genre_scores_gemma":[0.99901533,0.00034674592,0.00011275344,0.00014250689,0.00012893612,0.000028928704,0.0001679572,0.000008571685,0.000048257025],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99870855,0.00035680493,0.00028897164,0.0002601337,0.00011759905,0.00026795093],"domain_scores_gemma":[0.99904126,0.0002730622,0.00024041045,0.000381019,0.000021366828,0.000042881013],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006798526,0.00015701637,0.00028052073,0.000051099785,0.000033005683,0.0000038331855,0.00030051882,0.00025683982,0.000033204058],"category_scores_gemma":[0.00027129697,0.00010366157,0.00008078589,0.00007899736,0.00010153966,0.0000070025544,0.00005749018,0.00008122368,0.000007308428],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00052879826,0.00028917287,0.027328007,0.000024222367,0.00002821501,1.0489053e-7,0.00008740853,5.617327e-7,0.9636406,0.000040818413,0.0033082278,0.0047238674],"study_design_scores_gemma":[0.0003069992,0.0001189624,0.010889841,0.000012128112,0.000019573079,0.0000036848924,0.00006957935,0.000006534929,0.96445996,0.0000075373923,0.023986459,0.000118769],"about_ca_topic_score_codex":0.00014110061,"about_ca_topic_score_gemma":0.00006833657,"teacher_disagreement_score":0.020678231,"about_ca_system_score_codex":0.000009248012,"about_ca_system_score_gemma":0.000043666136,"threshold_uncertainty_score":0.42271963},"labels":[],"label_agreement":null},{"id":"W2006270175","doi":"10.1186/1471-2229-10-44","title":"The Puf family of RNA-binding proteins in plants: phylogeny, structural modeling, activity and subcellular localization","year":2010,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Nuclear Structure and Function","field":"Biochemistry, Genetics and Molecular Biology","cited_by":90,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"Natural Sciences and Engineering Research Council of Canada; Western Canada Research Grid","keywords":"Biology; Arabidopsis; RNA-binding protein; RNA; Subcellular localization; RNA recognition motif; Biochemistry; Cytoplasm; Gene; Cell biology; Amino acid; Genetics; Molecular biology; Mutant","score_opus":0.01119162097190157,"score_gpt":0.2233633864002197,"score_spread":0.21217176542831812,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2006270175","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9962846,0.00021535931,0.0028821395,0.000010233169,0.00027878076,0.00016996448,0.0000781894,0.000005444256,0.00007526294],"genre_scores_gemma":[0.9992573,0.00013024009,0.00025015953,0.000021290516,0.0001060556,0.000006255505,0.00020718687,0.00000833041,0.000013157803],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9993744,0.00006141281,0.00014340582,0.00021384553,0.00004154267,0.00016539694],"domain_scores_gemma":[0.9996943,0.00001627437,0.000077054654,0.00016410509,0.00002114198,0.00002712725],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014689362,0.000102674014,0.00011429274,0.000036179666,0.0000883662,0.0000097284355,0.000100010904,0.00022470321,0.000002455267],"category_scores_gemma":[0.000047064023,0.00007096741,0.000026840598,0.000036640326,0.00009799139,0.000003619643,0.00005926627,0.0001338072,7.088059e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002155269,0.0000056993586,0.020122375,0.000009821155,0.000011042397,5.638173e-7,0.000020673619,0.000102417565,0.97746897,0.00034689534,0.000015562951,0.0016804371],"study_design_scores_gemma":[0.0014255343,0.0005967966,0.040300265,0.000020423366,0.000023040495,0.00011255463,0.0001862891,0.060973845,0.8886736,0.002001697,0.0052455226,0.0004404472],"about_ca_topic_score_codex":0.00017425772,"about_ca_topic_score_gemma":0.0014698823,"teacher_disagreement_score":0.0887954,"about_ca_system_score_codex":0.000004348093,"about_ca_system_score_gemma":0.000030386636,"threshold_uncertainty_score":0.28939673},"labels":[],"label_agreement":null},{"id":"W2010315077","doi":"10.1186/1471-2229-14-36","title":"Involvement of plant endogenous ABA in Bacillus megaterium PGPR activity in tomato plants","year":2014,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Plant-Microbe Interactions and Immunity","field":"Agricultural and Biological Sciences","cited_by":185,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Ministerio de Economía y Competitividad; University of Alberta","keywords":"Abscisic acid; Rhizobacteria; Bacillus megaterium; Biology; Mutant; Shoot; Plant hormone; Auxin; Botany; Plant physiology; Ethylene; Horticulture; Bacteria; Rhizosphere; Gene; Biochemistry","score_opus":0.047715531843567284,"score_gpt":0.22586744120590765,"score_spread":0.17815190936234038,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2010315077","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9969403,0.00005378031,0.000004508826,0.000059377704,0.00024172121,0.00019077439,0.0018904816,0.000022307511,0.0005967353],"genre_scores_gemma":[0.9989517,0.00008955997,0.00003791123,0.00008806916,0.000046605175,0.000018832097,0.00074414414,8.7867056e-7,0.000022304203],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99865806,0.0003076694,0.0003378441,0.00026556337,0.00006576181,0.00036511465],"domain_scores_gemma":[0.99925584,0.00044991515,0.00014381301,0.000083459265,0.000015438876,0.00005154972],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003722115,0.00016347018,0.0003551923,0.000059563125,0.000055064706,0.000012104731,0.00026828636,0.00015893721,0.00010882691],"category_scores_gemma":[0.000045328972,0.00007071532,0.00005459014,0.00013104311,0.000056668217,0.00007132051,0.00011054039,0.00017820139,0.000027373688],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00024244803,0.00023650215,0.043832175,0.000012976749,0.000007738667,0.00000943906,0.00007866075,0.000006088541,0.9519411,0.00008600192,0.000077115736,0.0034697664],"study_design_scores_gemma":[0.00085803226,0.00085993373,0.5725282,0.00013422295,0.0000063820053,0.0002936011,0.00037055562,0.0005673828,0.40779418,0.0002247035,0.015934192,0.00042865763],"about_ca_topic_score_codex":0.009695755,"about_ca_topic_score_gemma":0.05409627,"teacher_disagreement_score":0.5441469,"about_ca_system_score_codex":0.0000469669,"about_ca_system_score_gemma":0.000014502855,"threshold_uncertainty_score":0.9968988},"labels":[],"label_agreement":null},{"id":"W2010684701","doi":"10.1186/1471-2229-10-130","title":"Coordinated transcriptional regulation of two key genes in the lignin branch pathway - CAD and CCR - is mediated through MYB- binding sites","year":2010,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Plant Gene Expression Analysis","field":"Biochemistry, Genetics and Molecular Biology","cited_by":41,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"FP7 International Cooperation; Centre de Coopération Internationale en Recherche Agronomique pour le Développement; Agence Universitaire de la Francophonie","keywords":"Promoter; Monolignol; Biology; MYB; Transcriptional regulation; Gene; Transcription factor; Regulation of gene expression; Genetics; DNA footprinting; Biochemistry; Gene expression; Biosynthesis","score_opus":0.0197208250661832,"score_gpt":0.26151480297278923,"score_spread":0.24179397790660603,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2010684701","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9977746,0.00044530045,0.0002896593,0.000191036,0.00009711962,0.00013236873,0.0008519262,0.000008136601,0.00020984636],"genre_scores_gemma":[0.9951237,0.00023395053,0.0005782197,0.00020416956,0.00008684283,0.000014445625,0.0036516665,0.000008240638,0.00009878753],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9989208,0.00019836954,0.00028389972,0.00031891614,0.00008355774,0.00019446474],"domain_scores_gemma":[0.9994834,0.00010967923,0.00012780094,0.0002032197,0.000043628137,0.000032246644],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00033448674,0.00014730898,0.00021034553,0.00009006244,0.00006201271,0.000010335287,0.00019348257,0.00026306688,0.000043215085],"category_scores_gemma":[0.00008069199,0.0001034511,0.00006232709,0.00015433833,0.00013600757,0.000006578223,0.000040145267,0.00012957468,0.0000046643167],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007084454,0.000037301023,0.046821028,0.000009703589,0.000032717857,0.0000011970174,0.00018588357,0.0000075566986,0.9504827,0.0005288797,0.0017197483,0.00010243283],"study_design_scores_gemma":[0.0009316842,0.00009100415,0.015117854,0.000010989372,0.000025523661,0.000070083806,0.000078046745,0.00041084504,0.9683401,0.00039287767,0.014350719,0.0001802746],"about_ca_topic_score_codex":0.00012666124,"about_ca_topic_score_gemma":0.0014465018,"teacher_disagreement_score":0.031703174,"about_ca_system_score_codex":0.0000033392942,"about_ca_system_score_gemma":0.00005142273,"threshold_uncertainty_score":0.42186135},"labels":[],"label_agreement":null},{"id":"W2013049452","doi":"10.1186/1471-2229-9-86","title":"Identification, functional characterization and developmental regulation of sesquiterpene synthases from sunflower capitate glandular trichomes","year":2009,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Plant biochemistry and biosynthesis","field":"Biochemistry, Genetics and Molecular Biology","cited_by":94,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"Natural Sciences and Engineering Research Council of Canada; Deutsche Forschungsgemeinschaft; Universität Hohenheim","keywords":"Sesquiterpene; Biology; Trichome; Biochemistry; Helianthus annuus; Sesquiterpene lactone; Botany; Sunflower","score_opus":0.012020095845280094,"score_gpt":0.20507251026174222,"score_spread":0.19305241441646212,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2013049452","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99559367,0.00023971815,0.00249641,0.000057272762,0.000090503876,0.00009679038,0.001377932,0.0000120898085,0.00003559986],"genre_scores_gemma":[0.98380375,0.00019229754,0.00041376415,0.00007720896,0.00013838467,0.0000057768734,0.015170465,0.0000049192654,0.0001934417],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9991556,0.000053215623,0.0002737654,0.00032188988,0.00006407662,0.00013145705],"domain_scores_gemma":[0.99958885,0.000045089506,0.00015022056,0.00012081706,0.000051190647,0.000043832853],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00010974289,0.00013436952,0.00015641321,0.000048293245,0.000060378414,0.000013591758,0.000083840794,0.00018628564,0.00004967955],"category_scores_gemma":[0.00010219008,0.000119140335,0.000037585596,0.000055022727,0.000060774848,0.000008533723,0.000027918584,0.00003283366,0.00000473583],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00032217347,0.000048877995,0.020005228,0.000008622694,0.00003350341,6.4027256e-7,0.00001627126,0.0000013849643,0.9780871,0.00004471694,0.00016030796,0.0012711323],"study_design_scores_gemma":[0.00026762421,0.000056540444,0.24887325,0.000011840799,0.000018226196,0.000031348434,0.000016216329,0.000046290763,0.748545,0.000054872547,0.001957484,0.00012129186],"about_ca_topic_score_codex":0.000012049642,"about_ca_topic_score_gemma":0.000012997141,"teacher_disagreement_score":0.22954212,"about_ca_system_score_codex":0.000008663458,"about_ca_system_score_gemma":0.000047312522,"threshold_uncertainty_score":0.4858402},"labels":[],"label_agreement":null},{"id":"W2014114319","doi":"10.1186/1471-2229-13-215","title":"A novel dominant glossy mutation causes suppression of wax biosynthesis pathway and deficiency of cuticular wax in Brassica napus","year":2013,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Plant Surface Properties and Treatments","field":"Agricultural and Biological Sciences","cited_by":76,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"National Research Council Canada; Saskatchewan Research Council (Canada)","funders":"National Research Council Canada; South China Agricultural University; National High-tech Research and Development Program; China Scholarship Council; China Agricultural University","keywords":"Biology; Wax; Mutant; Gene; Brassica; Genetics; Bulked segregant analysis; Botany; Gene mapping; Biochemistry; Chromosome","score_opus":0.02325902122514594,"score_gpt":0.20400051128515578,"score_spread":0.18074149006000984,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2014114319","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99852604,0.0005196024,0.000006005609,0.000105550855,0.000048300633,0.00022999379,0.00050723116,0.000007970511,0.000049334565],"genre_scores_gemma":[0.99935395,0.00015458795,0.00031587848,0.000012678821,0.0000076433125,0.000016044829,0.0001230238,6.6562336e-7,0.000015536547],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9991686,0.00007332648,0.00026495242,0.00021966103,0.00006811377,0.00020535322],"domain_scores_gemma":[0.99944353,0.00030264992,0.00013936793,0.00004307715,0.000031061,0.00004031931],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009904951,0.000117993004,0.0002614909,0.000023292081,0.00004680641,0.000007680823,0.00009934127,0.00011662709,0.000044163076],"category_scores_gemma":[0.000069513895,0.000039427774,0.00003996526,0.00010727354,0.00010164426,0.000062650186,0.000058687223,0.000038193266,0.000006389377],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006136373,0.00017194121,0.079246305,0.000019503523,0.0000074918134,0.0000034206298,0.00005153681,0.000002512551,0.91469115,0.0001001766,0.0000087458775,0.005635831],"study_design_scores_gemma":[0.00041959045,0.00048809324,0.41185898,0.00010150506,0.000016180884,0.00007035797,0.0002719356,0.0003998375,0.58579826,0.00020842801,0.0002127625,0.00015407566],"about_ca_topic_score_codex":0.0041500777,"about_ca_topic_score_gemma":0.0013039212,"teacher_disagreement_score":0.3326127,"about_ca_system_score_codex":0.0000098102,"about_ca_system_score_gemma":0.000010101057,"threshold_uncertainty_score":0.62737036},"labels":[],"label_agreement":null},{"id":"W2018063873","doi":"10.1186/1471-2229-11-102","title":"Do mitochondria play a role in remodelling lace plant leaves during programmed cell death?","year":2011,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Mitochondrial Function and Pathology","field":"Biochemistry, Genetics and Molecular Biology","cited_by":37,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University","funders":"Natural Sciences and Engineering Research Council of Canada; University of Toronto; Dalhousie University","keywords":"Biology; Programmed cell death; Cell biology; Mitochondrion; Apoptosis; Plant cell; Motility; Mitochondrial permeability transition pore; In vivo; Cell; Biochemistry; Genetics","score_opus":0.03241814057462704,"score_gpt":0.23397670485889935,"score_spread":0.20155856428427232,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2018063873","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99172395,0.00082424656,0.0019230375,0.00001143782,0.00071394077,0.00040740555,0.00014971565,0.000043360287,0.0042029195],"genre_scores_gemma":[0.9841065,0.00034639006,0.012979502,0.00012481186,0.00046667864,0.000103207625,0.00076397223,0.000038156562,0.001070775],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9980678,0.00023612342,0.0003800593,0.0006883418,0.000062635205,0.000565046],"domain_scores_gemma":[0.9992924,0.000035335106,0.00013165719,0.0003864929,0.000030741947,0.00012339711],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001898196,0.0002721713,0.00030542925,0.00014133342,0.00007953322,0.000013812453,0.00027136758,0.00052073656,0.00007943829],"category_scores_gemma":[0.000060896815,0.00024197651,0.0001064714,0.00009233926,0.00007389705,0.0000047272424,0.00012347856,0.0002210388,0.00006503685],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0012494263,0.00013798535,0.07510045,0.000029168395,0.000019343295,0.000036685422,0.00039127262,0.00003440905,0.9222332,0.00051902246,0.00015426835,0.00009472611],"study_design_scores_gemma":[0.0033426094,0.0009773392,0.006852127,0.0000491689,0.00003662091,0.0005964674,0.00039739828,0.00029787028,0.95800745,0.00083057996,0.027776213,0.0008361648],"about_ca_topic_score_codex":0.0001561457,"about_ca_topic_score_gemma":0.0007720409,"teacher_disagreement_score":0.06824833,"about_ca_system_score_codex":0.000017794611,"about_ca_system_score_gemma":0.00007294333,"threshold_uncertainty_score":0.98675156},"labels":[],"label_agreement":null},{"id":"W2019180148","doi":"10.1186/1471-2229-12-226","title":"Forward chemical genetic screens in Arabidopsis identify genes that influence sensitivity to the phytotoxic compound sulfamethoxazole","year":2012,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Nitrogen and Sulfur Effects on Brassica","field":"Biochemistry, Genetics and Molecular Biology","cited_by":18,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Agriculture and Agri-Food Canada","funders":"Natural Sciences and Engineering Research Council of Canada; Arizona Biomedical Research Commission","keywords":"Biology; Arabidopsis; Gene; Genetics; Arabidopsis thaliana; Computational biology; Mutant","score_opus":0.01891324327652099,"score_gpt":0.27652794403574515,"score_spread":0.25761470075922416,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2019180148","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9960607,0.0010502107,0.0018479065,0.00015854032,0.0002210464,0.00040104944,0.00015625694,0.000017718006,0.00008653171],"genre_scores_gemma":[0.99585265,0.00007984823,0.0024209889,0.0010051413,0.0003283179,0.00006678879,0.00018551091,0.00002032139,0.00004041917],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99805737,0.0005229338,0.00023876944,0.00042879063,0.0001047612,0.00064735627],"domain_scores_gemma":[0.99903405,0.00020731545,0.00007829679,0.00046498227,0.000035620054,0.00017971835],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006914379,0.00024490693,0.00029124413,0.00007299879,0.0000813317,0.00002312648,0.00027071463,0.00026597708,0.000008105516],"category_scores_gemma":[0.0002086103,0.00018155524,0.00011999764,0.00014859505,0.00015794262,0.0000074640907,0.00025465753,0.00016561619,0.00007957206],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010501791,0.000053791726,0.28095043,0.000010029445,0.000023558234,0.000005375471,0.000031556796,0.0000352624,0.71746856,0.000030644333,0.00032448416,0.00096131774],"study_design_scores_gemma":[0.00035942454,0.0000866686,0.31401545,0.000011555101,0.00001883274,0.00022000632,0.000044674358,0.00007704937,0.67502123,0.00003526036,0.009825904,0.00028398386],"about_ca_topic_score_codex":0.00013458623,"about_ca_topic_score_gemma":0.00077674387,"teacher_disagreement_score":0.042447325,"about_ca_system_score_codex":0.000023425724,"about_ca_system_score_gemma":0.000051389936,"threshold_uncertainty_score":0.7403608},"labels":[],"label_agreement":null},{"id":"W2019890127","doi":"10.1186/1471-2229-13-107","title":"Purple Acid Phosphatase5 is required for maintaining basal resistance against Pseudomonas syringaein Arabidopsis","year":2013,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Plant-Microbe Interactions and Immunity","field":"Agricultural and Biological Sciences","cited_by":42,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University","funders":"Dalhousie University","keywords":"Biology; Pseudomonas syringae; Arabidopsis; Mutant; Virulence; Gene; Plant disease resistance; Pathogen; Genetics; Plant defense against herbivory; Microbiology; Population; Defence mechanisms; Cell biology","score_opus":0.03224871255685839,"score_gpt":0.23977318249753984,"score_spread":0.20752446994068147,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2019890127","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99224985,0.00036714826,0.0000905093,0.00156383,0.00034654266,0.00045264745,0.0037688015,0.00008412093,0.0010765342],"genre_scores_gemma":[0.99234605,0.00012816949,0.0014416598,0.0013693713,0.00021781084,0.00016830265,0.0029276737,0.0000023282732,0.0013986322],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.99860084,0.00010875723,0.00033031066,0.00038842755,0.000060584487,0.0005110526],"domain_scores_gemma":[0.9991096,0.00044524402,0.00016177316,0.000107575834,0.00007696627,0.000098842815],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00024232674,0.00020333119,0.00027782065,0.000022827402,0.00036888386,0.00007518292,0.00037266695,0.00017773804,0.00056598725],"category_scores_gemma":[0.00014329597,0.00008847795,0.00013373459,0.00013998838,0.00008673626,0.00018051798,0.00009343444,0.00015424193,0.0002282292],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00018806683,0.00006892282,0.0026099377,0.000009171866,0.000029886476,0.0000027476287,0.0000425114,0.0000011368221,0.92834383,0.0005603739,0.061274543,0.0068688663],"study_design_scores_gemma":[0.0007856803,0.00054613437,0.025884937,0.00014015,0.000030842737,0.000043503063,0.0009240955,0.00046481733,0.280991,0.0033365677,0.6859963,0.00085596857],"about_ca_topic_score_codex":0.0006670821,"about_ca_topic_score_gemma":0.0019119822,"teacher_disagreement_score":0.6473528,"about_ca_system_score_codex":0.000042233023,"about_ca_system_score_gemma":0.00001671784,"threshold_uncertainty_score":0.61971635},"labels":[],"label_agreement":null},{"id":"W2019962126","doi":"10.1186/1471-2229-8-91","title":"Transcriptional profiling of pea ABR17 mediated changes in gene expression in Arabidopsis thaliana","year":2008,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Plant-Microbe Interactions and Immunity","field":"Agricultural and Biological Sciences","cited_by":47,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"Natural Sciences and Engineering Research Council of Canada; University of Alberta; Alberta Agricultural Research Institute","keywords":"Biology; Arabidopsis; Arabidopsis thaliana; Gene; Gene expression; Transcriptome; Gene family; Complementary DNA; Gene expression profiling; Abiotic stress; Genetics; Transgene; WRKY protein domain; Cell biology; Molecular biology; Mutant","score_opus":0.057099157778497785,"score_gpt":0.23938928528800335,"score_spread":0.18229012750950557,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2019962126","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9985676,0.00023424745,0.000004061497,0.00014526813,0.00010513248,0.000106798856,0.000700647,0.000012843446,0.00012343307],"genre_scores_gemma":[0.9979054,0.00042958767,0.0002970585,0.000046662557,0.000047591013,0.000014805699,0.0012245878,4.796546e-7,0.000033878736],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9992446,0.0001411124,0.0002154423,0.00016497826,0.000047121026,0.00018676593],"domain_scores_gemma":[0.99961686,0.00023100305,0.00007287977,0.00003371581,0.000019099833,0.000026422109],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014726086,0.000088496854,0.00018660826,0.00004783352,0.00005147642,0.0000026056787,0.00014043262,0.0001231205,0.00017130132],"category_scores_gemma":[0.000042895444,0.00003633238,0.000035951598,0.00016780972,0.00005650077,0.00004534907,0.000022363556,0.00012964885,0.0000086124155],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008366877,0.00008616815,0.17048284,0.000003655742,0.000001991564,0.0000059975146,0.00006117765,0.0000029928074,0.8290037,0.000015635555,0.00004537655,0.00020677694],"study_design_scores_gemma":[0.0002108447,0.000117796444,0.5806719,0.0000424006,0.000001475077,0.00008640743,0.00016648142,0.000058440062,0.41716814,0.0000338869,0.0013407441,0.000101479745],"about_ca_topic_score_codex":0.0010957286,"about_ca_topic_score_gemma":0.009746556,"teacher_disagreement_score":0.41183555,"about_ca_system_score_codex":0.000016617567,"about_ca_system_score_gemma":0.000011832004,"threshold_uncertainty_score":0.5438807},"labels":[],"label_agreement":null},{"id":"W2023284860","doi":"10.1186/1471-2229-8-42","title":"Overexpression of mtDNA-associated AtWhy2 compromises mitochondrial function","year":2008,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Photosynthetic Processes and Mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":52,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal","funders":"Natural Sciences and Engineering Research Council of Canada; Fonds Québécois de la Recherche sur la Nature et les Technologies","keywords":"Biology; Mitochondrial DNA; Function (biology); Computational biology; Genetics; Evolutionary biology; Cell biology; Gene","score_opus":0.0206440462310892,"score_gpt":0.23010322950136675,"score_spread":0.20945918327027754,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2023284860","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99292314,0.00016903934,0.005497314,0.000008564159,0.00042041042,0.00015714373,0.00025817045,0.000019779622,0.00054643844],"genre_scores_gemma":[0.9979726,0.00017792796,0.00043774262,0.000083071856,0.00016734874,0.000017413764,0.0008453001,0.000011821087,0.00028674895],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99913716,0.00007210512,0.00021877426,0.00028854667,0.00006891651,0.00021447435],"domain_scores_gemma":[0.9994947,0.000029150271,0.00016167607,0.0001996094,0.000059419723,0.00005545068],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00006410848,0.00013638492,0.00020996718,0.00003577485,0.000079126934,0.0000023870746,0.00014875826,0.00027254262,0.00003972473],"category_scores_gemma":[0.00013571588,0.000112404006,0.00008889782,0.000048676655,0.000089094574,0.0000024913422,0.00008281839,0.000060522307,0.0000070980786],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00056971906,0.000102880585,0.0014987271,0.000014102708,0.00003244819,9.5511e-7,0.000013926374,0.0000048126667,0.9969067,0.00017632096,0.0006241223,0.000055258057],"study_design_scores_gemma":[0.0009687512,0.0006663949,0.0014003778,0.00002631215,0.000017422051,0.000051298754,0.000015358657,0.000041672905,0.9855368,0.00032811955,0.010799553,0.00014794143],"about_ca_topic_score_codex":0.000043887885,"about_ca_topic_score_gemma":0.00003771992,"teacher_disagreement_score":0.01136993,"about_ca_system_score_codex":0.0000073415317,"about_ca_system_score_gemma":0.00010152399,"threshold_uncertainty_score":0.45837024},"labels":[],"label_agreement":null},{"id":"W2024431133","doi":"10.1186/1471-2229-8-86","title":"The plant Apolipoprotein D ortholog protects Arabidopsis against oxidative stress","year":2008,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Plant responses to water stress","field":"Agricultural and Biological Sciences","cited_by":117,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université du Québec à Montréal","funders":"Agriculture and Agri-Food Canada; Natural Sciences and Engineering Research Council of Canada; Génome Québec; Genome Canada","keywords":"Biology; Arabidopsis; Oxidative stress; Arabidopsis thaliana; Paraquat; Complementation; Lipocalin; Cell biology; Genetics; Gene; Biochemistry; Phenotype; Mutant","score_opus":0.04139427743484112,"score_gpt":0.2159550464200324,"score_spread":0.1745607689851913,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2024431133","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99444944,0.00026557402,0.0000071738646,0.00048507628,0.0002158205,0.00062395126,0.003261877,0.00013806197,0.00055304327],"genre_scores_gemma":[0.9967764,0.00041404623,0.00010883874,0.00018410594,0.0002819396,0.00017087883,0.0013823346,0.0000018322825,0.00067961303],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99781114,0.0005201622,0.0003178672,0.0004963248,0.00016094165,0.00069356407],"domain_scores_gemma":[0.9985123,0.0009813828,0.00018627159,0.00014742365,0.000043661934,0.00012894481],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002788,0.00027676608,0.00030389204,0.000024028855,0.00076097815,0.00003787225,0.0006722713,0.00024206088,0.00003691987],"category_scores_gemma":[0.0001976711,0.00008283623,0.00011100345,0.00020409908,0.0003705379,0.00006470328,0.00018775572,0.00026420385,0.00012921098],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0014492684,0.00018940709,0.08149994,0.000016211045,0.000091226895,0.0004667879,0.0002196071,0.000012108685,0.88154554,0.0009501821,0.0029669772,0.030592725],"study_design_scores_gemma":[0.00064778625,0.0010586545,0.47526065,0.00008624119,0.000018561379,0.0017019911,0.00031905723,0.00014678524,0.37808684,0.00045130198,0.1412424,0.000979748],"about_ca_topic_score_codex":0.0007419533,"about_ca_topic_score_gemma":0.010589085,"teacher_disagreement_score":0.50345874,"about_ca_system_score_codex":0.0000286131,"about_ca_system_score_gemma":0.000034385645,"threshold_uncertainty_score":0.5908958},"labels":[],"label_agreement":null},{"id":"W2026670521","doi":"10.1186/1471-2229-13-93","title":"A fungal endophyte induces transcription of genes encoding a redundant fungicide pathway in its host plant","year":2013,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Cancer Treatment and Pharmacology","field":"Medicine","cited_by":71,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Agriculture and Agri-Food Canada; University of Guelph","funders":"Ministry of Agriculture, Food and Rural Affairs; Ontario Ministry of Agriculture, Food and Rural Affairs; Washington State University","keywords":"Endophyte; Biology; Taxus; Fungicide; Plant use of endophytic fungi in defense; Botany; Botrytis cinerea; Host (biology); Gene; Biochemistry; Ecology","score_opus":0.05775655091710207,"score_gpt":0.28879852175319964,"score_spread":0.23104197083609757,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2026670521","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99394965,0.0034681659,0.000010476029,0.00019134374,0.0004695261,0.0006057958,0.00040071082,0.000030407999,0.0008739164],"genre_scores_gemma":[0.9982024,0.0006721529,0.00015911495,0.00015052612,0.00019777364,0.00013228078,0.00030113777,0.00001050461,0.00017409974],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9988754,0.0001116974,0.0003578312,0.0002660268,0.00006783383,0.00032124558],"domain_scores_gemma":[0.999509,0.0001581046,0.00011424794,0.0001030066,0.000034195644,0.000081449856],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012687361,0.00016858474,0.000439364,0.0002222391,0.000028919976,0.0000043971286,0.00007552931,0.00016819403,0.00036225587],"category_scores_gemma":[0.00001876228,0.00012711015,0.00008120575,0.00012364968,0.00006117028,0.000056245663,0.000018699446,0.00014895444,0.00004254609],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0007064769,0.00019164775,0.0694776,0.00009144603,0.00005984562,0.000062550964,0.00039223052,0.0000017459616,0.9274712,0.0003248766,0.00016963616,0.0010507015],"study_design_scores_gemma":[0.0037736287,0.0013340539,0.101862304,0.00014453725,0.00007768799,0.0005334346,0.00017762362,0.00014751527,0.8878663,0.000066587294,0.0038217686,0.00019451743],"about_ca_topic_score_codex":0.0006134248,"about_ca_topic_score_gemma":0.0006300066,"teacher_disagreement_score":0.039604895,"about_ca_system_score_codex":0.00006068717,"about_ca_system_score_gemma":0.00013769715,"threshold_uncertainty_score":0.5183401},"labels":[],"label_agreement":null},{"id":"W2031840862","doi":"10.1186/s12870-014-0389-x","title":"A comparison of induced and developmental cell death morphologies in lace plant (Aponogeton madagascariensis) leaves","year":2014,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Cell death mechanisms and regulation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":19,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University","funders":"Natural Sciences and Engineering Research Council of Canada; Killam Trusts; Dalhousie University","keywords":"Programmed cell death; Biology; Vacuole; Cell biology; Organelle; Multicellular organism; Autophagy; Apoptosis; Necrosis; Plant cell; Botany; Cell; Cytoplasm; Biochemistry; Genetics","score_opus":0.034858695389426396,"score_gpt":0.26921119834407864,"score_spread":0.23435250295465224,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2031840862","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99833053,0.00033367614,0.00068042136,0.000013094945,0.00009394825,0.000123276,0.000045443216,0.000007729996,0.0003718784],"genre_scores_gemma":[0.995883,0.000100032055,0.0034625633,0.000034088527,0.000033112596,0.000007300495,0.00040595033,0.00000783209,0.00006611539],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9991488,0.00009584631,0.0002418506,0.00028230262,0.000041404877,0.00018979331],"domain_scores_gemma":[0.9996882,0.000047754642,0.000102104466,0.000110427085,0.000015901745,0.000035610712],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00018060584,0.00013248112,0.0002445784,0.000068695525,0.000033348133,0.000005176282,0.00008827914,0.00024845416,0.0000039980405],"category_scores_gemma":[0.0000411896,0.00010919801,0.000028962439,0.00003577294,0.00005142946,0.0000016798012,0.00011027337,0.00006508644,0.0000019898905],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012293027,0.000044538043,0.15480943,0.000020305415,0.0000075723588,8.811973e-7,0.0000855277,0.000028110819,0.8436527,0.00048647763,0.000070048765,0.00067146454],"study_design_scores_gemma":[0.0007344687,0.0004713159,0.07880988,0.000015039972,0.0000097527745,0.000048378934,0.0002983029,0.0007962641,0.9159348,0.00015458206,0.0025368265,0.00019037163],"about_ca_topic_score_codex":0.00009476187,"about_ca_topic_score_gemma":0.00043541077,"teacher_disagreement_score":0.07599955,"about_ca_system_score_codex":0.000009525615,"about_ca_system_score_gemma":0.000039929055,"threshold_uncertainty_score":0.44529656},"labels":[],"label_agreement":null},{"id":"W2031919282","doi":"10.1186/s12870-014-0340-1","title":"Identification of candidate genes, regions and markers for pre-harvest sprouting resistance in wheat (Triticum aestivum L.)","year":2014,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Seed Germination and Physiology","field":"Agricultural and Biological Sciences","cited_by":107,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan; Saskatchewan Research Council (Canada); Agriculture and Agri-Food Canada","funders":"Alberta Innovates; Genome Prairie; Western Grains Research Foundation; Genome Canada","keywords":"Biology; Quantitative trait locus; Brachypodium; Marker-assisted selection; Doubled haploidy; Brachypodium distachyon; Single-nucleotide polymorphism; Genetics; Candidate gene; Population; SNP; Expressed sequence tag; Genome; Gene; Genotype","score_opus":0.020713245733689857,"score_gpt":0.250125505142935,"score_spread":0.22941225940924517,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2031919282","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99848914,0.00023136419,0.00020781171,0.00044206495,0.00008692299,0.00022054093,0.00021136159,0.000013059381,0.0000977161],"genre_scores_gemma":[0.99913436,0.00004586378,0.00017633989,0.000058545353,0.000062310275,0.00003268269,0.00027547753,5.7673077e-7,0.00021384917],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9992285,0.00013840978,0.00023242341,0.00021670236,0.000025520598,0.00015845122],"domain_scores_gemma":[0.9992073,0.0005662726,0.000120782955,0.00004189238,0.000033306485,0.00003044431],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003243678,0.00006999678,0.000148978,0.000019485064,0.00006398299,0.000006159669,0.00009188341,0.00009248453,0.000005781753],"category_scores_gemma":[0.00017491289,0.0000324467,0.000024491206,0.000094963536,0.00008779279,0.000032214648,0.000020763775,0.00003754282,0.0000010794572],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002548167,0.00003509857,0.064397976,0.000056932455,0.0000037999876,2.022355e-7,0.000045660527,0.000003112975,0.91845226,0.012283105,0.0002473617,0.004219699],"study_design_scores_gemma":[0.00031615418,0.00017017321,0.9761276,0.000030492354,0.00000744139,0.0000049737905,0.00007895667,0.0006667424,0.00781441,0.00405322,0.010601144,0.00012864763],"about_ca_topic_score_codex":0.00018685321,"about_ca_topic_score_gemma":0.0045962883,"teacher_disagreement_score":0.9117297,"about_ca_system_score_codex":0.000007987629,"about_ca_system_score_gemma":0.000007831697,"threshold_uncertainty_score":0.25648367},"labels":[],"label_agreement":null},{"id":"W2032060664","doi":"10.1186/1471-2229-14-62","title":"Reduced polyphenol oxidase gene expression and enzymatic browning in potato (Solanum tuberosum L.) with artificial microRNAs","year":2014,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Postharvest Quality and Shelf Life Management","field":"Agricultural and Biological Sciences","cited_by":139,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Agriculture and Agri-Food Canada","funders":"Agriculture and Agri-Food Canada; Ministry of Education, India; Ministry of Education of the People's Republic of China","keywords":"Biology; Solanum tuberosum; Browning; Polyphenol oxidase; Gene expression; microRNA; Gene; Catechol oxidase; Enzyme; Polyphenol; Botany; Solanum; Biochemistry; Antioxidant; Peroxidase","score_opus":0.030089275166248926,"score_gpt":0.2210786807422882,"score_spread":0.19098940557603927,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2032060664","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9988224,0.00008455512,0.00015797264,0.0004628073,0.00005849549,0.00019394876,0.000054748714,0.00004066258,0.00012439642],"genre_scores_gemma":[0.9983058,0.000013811976,0.0009199221,0.00036001435,0.00013212115,0.000018981495,0.00017560172,0.0000011738715,0.0000726054],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99865234,0.00031928852,0.0002672425,0.00034953782,0.00007608541,0.0003355001],"domain_scores_gemma":[0.99946696,0.00028321124,0.00009450214,0.00005730035,0.000011163312,0.00008689613],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00044329363,0.0001532426,0.00023488155,0.000027819833,0.00011990844,0.00004524088,0.00015207153,0.00010827743,0.00003658625],"category_scores_gemma":[0.000059043356,0.000058241018,0.000025903208,0.00011974815,0.0000805254,0.00006158337,0.000094339135,0.00010332085,0.000016926006],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00016824255,0.00006117505,0.018786283,0.000015572141,0.0000049824566,0.0000047988706,0.00009418563,0.0000027556089,0.9778671,0.0010307876,0.000073340416,0.0018907642],"study_design_scores_gemma":[0.0012909742,0.0011563795,0.48024014,0.0002478573,0.000036716632,0.00014360467,0.0010527304,0.00055976486,0.5023371,0.002944926,0.008993575,0.0009962267],"about_ca_topic_score_codex":0.00040658732,"about_ca_topic_score_gemma":0.0023569602,"teacher_disagreement_score":0.47553,"about_ca_system_score_codex":0.000011625556,"about_ca_system_score_gemma":0.0000058140686,"threshold_uncertainty_score":0.23749998},"labels":[],"label_agreement":null},{"id":"W2032938403","doi":"10.1186/1471-2229-12-198","title":"Beneficial ‘unintended effects’ of a cereal cystatin in transgenic lines of potato, Solanum tuberosum","year":2012,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Protease and Inhibitor Mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":29,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"Natural Sciences and Engineering Research Council of Canada; Fonds Québécois de la Recherche sur la Nature et les Technologies","keywords":"Biology; Proteome; Biotic stress; Transgene; Cystatin; Proteases; Genetically modified crops; Genetically modified rice; Abiotic stress; Protease; Cysteine protease; Pathogen; Pathogenesis-related protein; Cell biology; Biochemistry; Cystatin C; Microbiology; Enzyme; Gene; Gene expression","score_opus":0.01136285469251417,"score_gpt":0.23956287196118334,"score_spread":0.22820001726866918,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2032938403","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99667734,0.0011156353,0.0012538164,0.000012344038,0.00030222052,0.00023357675,0.00027305612,0.000006143975,0.00012585924],"genre_scores_gemma":[0.998254,0.00009872507,0.0008464163,0.00004001847,0.00021050576,0.000026296944,0.0004912913,0.000011992804,0.0000207758],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9989791,0.00013240596,0.00032902992,0.00019027159,0.000050737766,0.00031843665],"domain_scores_gemma":[0.9995722,0.000043324624,0.000120283104,0.00017303244,0.00003291413,0.00005820803],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00018073201,0.00014490262,0.00028628146,0.00007381099,0.000014515286,0.0000013034665,0.00013833154,0.00025026966,0.000011340047],"category_scores_gemma":[0.000087039305,0.00012283023,0.000102326056,0.00006249807,0.000082818646,0.0000032517235,0.000049688882,0.000076036216,0.0000028695856],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003670237,0.0001536523,0.012345106,0.00012515398,0.000028444643,0.0000012010992,0.000077181605,0.0000022941535,0.98538536,0.001188247,0.0000957467,0.00023056164],"study_design_scores_gemma":[0.0009085299,0.00063462154,0.0032046014,0.00003483835,0.000018714176,0.000018424493,0.000039770766,0.000022704424,0.9943157,0.000280816,0.00038836707,0.00013292294],"about_ca_topic_score_codex":0.00020105208,"about_ca_topic_score_gemma":0.00033151446,"teacher_disagreement_score":0.009140505,"about_ca_system_score_codex":0.0000056441318,"about_ca_system_score_gemma":0.000060432583,"threshold_uncertainty_score":0.50088716},"labels":[],"label_agreement":null},{"id":"W2034132488","doi":"10.1186/1471-2229-13-180","title":"Genome-wide identification of Thellungiella salsuginea microRNAs with putative roles in the salt stress response","year":2013,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Plant Molecular Biology Research","field":"Agricultural and Biological Sciences","cited_by":93,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ministry of Agriculture","funders":"National Key Research and Development Program of China; National Natural Science Foundation of China","keywords":"Biology; Gene; microRNA; Genetics; Deep sequencing; Arabidopsis; Genome; Gene expression profiling; Transcription factor; Gene expression; Computational biology; Mutant","score_opus":0.019485612338192994,"score_gpt":0.2404203920652465,"score_spread":0.22093477972705353,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2034132488","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99747175,0.000269804,0.000029125224,0.0010111561,0.000018299685,0.00048693945,0.0006106853,0.000014077905,0.000088186345],"genre_scores_gemma":[0.99879485,0.000058027443,0.000057063055,0.000119592914,0.000025854357,0.00006354501,0.0008083247,9.686411e-7,0.000071796596],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99787724,0.0011431256,0.00027293852,0.00028930206,0.000103817976,0.00031360038],"domain_scores_gemma":[0.9976658,0.0019811436,0.00014924062,0.000098637225,0.000068446796,0.000036719637],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00084883097,0.0001294768,0.00019556601,0.000040477695,0.00006894116,0.000025674062,0.0005263325,0.00013789898,0.000053048567],"category_scores_gemma":[0.00020738038,0.00003843248,0.000040608018,0.00026087853,0.00023989768,0.00003808034,0.000064849926,0.00015269167,0.000063848995],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00041156882,0.000051204577,0.15107219,0.0000038545554,0.000012621915,0.000006872441,0.00014379442,0.0000090981175,0.8478256,0.00008090305,0.00003337812,0.00034894177],"study_design_scores_gemma":[0.00014897999,0.00036416092,0.9087525,0.000010428366,0.00000512636,0.00004379157,0.0006717667,0.000040664218,0.08902111,0.00032924477,0.0005038451,0.000108390705],"about_ca_topic_score_codex":0.00038959575,"about_ca_topic_score_gemma":0.0019492133,"teacher_disagreement_score":0.75880444,"about_ca_system_score_codex":0.0000131232355,"about_ca_system_score_gemma":0.000024685056,"threshold_uncertainty_score":0.15672311},"labels":[],"label_agreement":null},{"id":"W2035145804","doi":"10.1186/1471-2229-8-120","title":"Arabidopsis At5g39790 encodes a chloroplast-localized, carbohydrate-binding, coiled-coil domain-containing putative scaffold protein","year":2008,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Food composition and properties","field":"Nursing","cited_by":41,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Alberta Glycomics Centre; University of Calgary","funders":"","keywords":"Biology; Arabidopsis; Chloroplast; Biochemistry; Starch; Amyloplast; Amylose; Protein domain; Gene; Enzyme; Mutant; Plastid","score_opus":0.03198350614879349,"score_gpt":0.24925005597126487,"score_spread":0.21726654982247137,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2035145804","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99375653,0.0005041838,0.00023910786,0.00038283507,0.00073669053,0.00055865344,0.00025278758,0.0002987368,0.0032704715],"genre_scores_gemma":[0.9958439,0.000021666658,0.0025588856,0.0004267205,0.00022158326,0.0001889824,0.00033456573,0.00004183272,0.00036185686],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9975008,0.0005262914,0.0004993051,0.0005977976,0.00017880749,0.0006970312],"domain_scores_gemma":[0.99896896,0.00026717022,0.00023853668,0.00027725677,0.000083806626,0.0001642422],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00028132304,0.00038776986,0.0005753551,0.00025100217,0.0005359679,0.000043547218,0.00029374214,0.00030008412,0.00012695865],"category_scores_gemma":[0.00009336912,0.0003178184,0.00015676442,0.0002547868,0.0004347555,0.00014043224,0.00009357121,0.0002935013,0.00026153077],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.024454536,0.0003965223,0.02664737,0.00017744729,0.00033130962,0.00037682013,0.013116302,0.0002461471,0.9266462,0.002900378,0.0017475185,0.002959466],"study_design_scores_gemma":[0.00913687,0.013017271,0.0023044161,0.00064733595,0.000154441,0.0025489002,0.0041133272,0.0047482094,0.9061401,0.0028900944,0.051708028,0.0025910453],"about_ca_topic_score_codex":0.00066837674,"about_ca_topic_score_gemma":0.00043850552,"teacher_disagreement_score":0.04996051,"about_ca_system_score_codex":0.00013759326,"about_ca_system_score_gemma":0.00010700465,"threshold_uncertainty_score":0.9999274},"labels":[],"label_agreement":null},{"id":"W2035259929","doi":"10.1186/s12870-014-0233-3","title":"Impact of swapping soils on the endophytic bacterial communities of pre-domesticated, ancient and modern maize","year":2014,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Plant-Microbe Interactions and Immunity","field":"Agricultural and Biological Sciences","cited_by":120,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of Guelph","funders":"Ontario Ministry of Agriculture, Food and Rural Affairs; University of Guelph","keywords":"Biology; Domestication; Endophyte; Colonization; Soil water; Temperate climate; Agronomy; Population; Botany; Ecology","score_opus":0.0380524659871454,"score_gpt":0.24656654811426512,"score_spread":0.20851408212711972,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2035259929","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9987313,0.000033358356,0.000015320022,0.000041877487,0.00008823013,0.00009971708,0.0006210114,0.0000095158575,0.00035966845],"genre_scores_gemma":[0.99964404,0.00005261316,0.000024522238,0.000035156187,0.000040098555,0.0000040694495,0.00018206499,4.9635554e-7,0.00001693935],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9992684,0.00026672622,0.00018836264,0.00008411972,0.000035011737,0.00015739002],"domain_scores_gemma":[0.9982279,0.0014979728,0.00013469787,0.00008064024,0.000032140517,0.000026648437],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00022772953,0.000094668976,0.0001996663,0.000015478854,0.00010035984,0.000012211108,0.00019409618,0.00006239164,0.00016158061],"category_scores_gemma":[0.0000896324,0.000028808661,0.00006305721,0.000053834836,0.00016805029,0.000027655904,0.000074779244,0.00010545508,0.000004488914],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002439505,0.00007533741,0.011723079,0.0000070511805,0.00002290526,1.1364084e-7,0.000116462055,0.000010609455,0.9855677,0.00036255235,0.000105575404,0.0017646694],"study_design_scores_gemma":[0.00034529582,0.0021049601,0.96514475,0.00011685101,0.00002303763,0.00010406662,0.0003156021,0.0021109337,0.02701174,0.00088257354,0.0016481798,0.00019199919],"about_ca_topic_score_codex":0.0019205363,"about_ca_topic_score_gemma":0.0008088594,"teacher_disagreement_score":0.95855594,"about_ca_system_score_codex":0.000009854119,"about_ca_system_score_gemma":0.00000944219,"threshold_uncertainty_score":0.29032892},"labels":[],"label_agreement":null},{"id":"W2036314366","doi":"10.1186/1471-2229-13-58","title":"Erratum to: Do mitochondria play a role in remodelling lace plant leaves during programmed cell death?","year":2013,"lang":"en","type":"erratum","venue":"BMC Plant Biology","topic":"Plant tissue culture and regeneration","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University","funders":"","keywords":"Biology; Programmed cell death; Mitochondrion; Selection (genetic algorithm); Cell biology; Botany; Computational biology; Apoptosis; Genetics; Computer science; Artificial intelligence","score_opus":0.013958681987987854,"score_gpt":0.2323068356869859,"score_spread":0.21834815369899804,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2036314366","genre_codex":"empirical","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.88879126,0.053777657,0.0009354586,0.00038863413,0.025589295,0.004535021,0.0042914725,0.00020395446,0.021487245],"genre_scores_gemma":[0.18827014,0.0124810515,0.010796986,0.0007181332,0.017360037,0.0015163326,0.13793394,0.00043501108,0.6304884],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9969701,0.00021746161,0.0005851861,0.0012140663,0.00014998982,0.0008631772],"domain_scores_gemma":[0.9988365,0.000027613358,0.000271823,0.0005689411,0.000074583324,0.00022050549],"candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.0001621865,0.00064856955,0.00068384263,0.0002307578,0.0001416716,0.00008491664,0.00055763224,0.0020469085,0.00001802931],"category_scores_gemma":[0.000068747,0.0005316978,0.00016826154,0.00013247762,0.000058837388,0.0000073171345,0.00022388436,0.0007203307,0.000101055004],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00023153011,0.00009210284,0.0010661365,0.0001455821,0.000056608533,0.000035906447,0.00020128694,0.00018450971,0.6845273,0.000040384828,0.31334597,0.00007270101],"study_design_scores_gemma":[0.00092252076,0.00041409174,0.00038005246,0.00030109886,0.00005905522,0.00030756963,0.000112668604,0.0003370101,0.15473439,0.00007349609,0.8412417,0.0011163233],"about_ca_topic_score_codex":0.00066777907,"about_ca_topic_score_gemma":0.008501469,"teacher_disagreement_score":0.7005211,"about_ca_system_score_codex":0.0000662158,"about_ca_system_score_gemma":0.0003610795,"threshold_uncertainty_score":0.9997135},"labels":[],"label_agreement":null},{"id":"W2036844241","doi":"10.1186/s12870-014-0380-6","title":"Western white pine SNP discovery and high-throughput genotyping for breeding and conservation applications","year":2014,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Yeasts and Rust Fungi Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":39,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Natural Resources Canada; Canadian Forest Service","funders":"","keywords":"Biology; Single-nucleotide polymorphism; Genetics; Germplasm; SNP; Genotyping; Candidate gene; Plant disease resistance; Gene; SNP genotyping; Linkage disequilibrium; Molecular breeding; Locus (genetics); Genotype; Botany","score_opus":0.020468906752556613,"score_gpt":0.2510035739923422,"score_spread":0.23053466723978558,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2036844241","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.79084677,0.0021382745,0.20557523,0.0006249492,0.00012330642,0.0003277097,0.0002633276,0.000013302807,0.00008712761],"genre_scores_gemma":[0.99469733,0.0005550517,0.0028589633,0.00040014542,0.00048462828,0.00008192557,0.00068099337,0.000009480032,0.00023148119],"study_design_codex":"observational","study_design_gemma":"not_applicable","domain_scores_codex":[0.99945813,0.000021861966,0.00011518908,0.00022927918,0.00001658462,0.00015898036],"domain_scores_gemma":[0.999746,0.00004910193,0.000057510504,0.000092083435,0.000024392266,0.000030873904],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00011469685,0.00009544062,0.0001267179,0.0000201477,0.00011922535,0.000016555654,0.00004146017,0.00009721218,9.729374e-7],"category_scores_gemma":[0.000029819523,0.000076760174,0.00001821507,0.000018712377,0.00008200363,0.000004636047,0.00008896199,0.000026728048,0.0000011980402],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012677888,0.00002671308,0.5270151,0.00011955739,0.00007449964,7.274166e-8,0.000059140373,0.0000052419896,0.45595115,0.011501467,0.001072181,0.0040480974],"study_design_scores_gemma":[0.002529437,0.00093468674,0.31502396,0.000053788317,0.00015769088,0.00012113565,0.00019092538,0.00066711876,0.01959542,0.0015185493,0.658411,0.0007962887],"about_ca_topic_score_codex":0.000027244554,"about_ca_topic_score_gemma":0.00018606345,"teacher_disagreement_score":0.6573388,"about_ca_system_score_codex":0.0000029649498,"about_ca_system_score_gemma":0.000010194521,"threshold_uncertainty_score":0.31301892},"labels":[],"label_agreement":null},{"id":"W2037508026","doi":"10.1186/s12870-015-0458-9","title":"Association mapping in sunflower (Helianthus annuus L.) reveals independent control of apical vs. basal branching","year":2015,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Sunflower and Safflower Cultivation","field":"Agricultural and Biological Sciences","cited_by":66,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"National Institute of Food and Agriculture; Genome British Columbia; Genome Canada; U.S. Department of Agriculture; U.S. Department of Energy; National Science Foundation","keywords":"Biology; Helianthus annuus; Association mapping; Population; Genetics; Sunflower; Evolutionary biology; Single-nucleotide polymorphism; Gene; Genotype; Horticulture","score_opus":0.0351106819064353,"score_gpt":0.23152308874705055,"score_spread":0.19641240684061526,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2037508026","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9976191,0.00012488585,0.00029567722,0.00061902864,0.00047100606,0.00022565832,0.00021417008,0.000035290726,0.00039521957],"genre_scores_gemma":[0.9990136,0.000015201299,0.00011696814,0.00032648264,0.00022461456,0.00001350131,0.00020425451,0.0000010531073,0.000084324914],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9984097,0.00033892892,0.0004405278,0.00028516084,0.00019234217,0.00033335737],"domain_scores_gemma":[0.9991192,0.00043797202,0.00020488196,0.000050845938,0.00009715459,0.0000899223],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0011141474,0.00013560012,0.0003410607,0.00004403756,0.000043783173,0.000017368628,0.00018247013,0.00029136508,0.00008626268],"category_scores_gemma":[0.00067886885,0.000059982485,0.00007666108,0.00024037824,0.000027872364,0.000100119294,0.000040838186,0.00017567855,0.00002664035],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00018672965,0.0000856232,0.8760793,0.000005222789,0.000012634964,0.0000039640813,0.00020487353,0.000019632864,0.12083897,0.00012658456,0.0006340197,0.0018024116],"study_design_scores_gemma":[0.0011804308,0.00019174964,0.9924422,0.000038034716,0.000008833814,0.000007014014,0.00023344424,0.00058077084,0.0010430175,0.0007517976,0.0033284398,0.00019426217],"about_ca_topic_score_codex":0.00054907805,"about_ca_topic_score_gemma":0.0016493298,"teacher_disagreement_score":0.119795956,"about_ca_system_score_codex":0.000104047955,"about_ca_system_score_gemma":0.000023207756,"threshold_uncertainty_score":0.24460147},"labels":[],"label_agreement":null},{"id":"W2042639684","doi":"10.1186/1471-2229-9-101","title":"An archived activation tagged population of Arabidopsis thalianato facilitate forward genetics approaches","year":2009,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Plant Molecular Biology Research","field":"Agricultural and Biological Sciences","cited_by":63,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Queen's University; Agriculture and Agri-Food Canada","funders":"Agriculture and Agri-Food Canada; Natural Sciences and Engineering Research Council of Canada","keywords":"Biology; Genetics; Population; Gene; Forward genetics; Reverse genetics; Functional genomics; Genome; Computational biology; Phenotype; Genomics; Genetic screen; Mutant","score_opus":0.0994113553413422,"score_gpt":0.26971171277588807,"score_spread":0.17030035743454586,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2042639684","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99846494,0.000052907308,0.00018555498,0.00024290614,0.00002810611,0.00024753317,0.0005379312,0.00003792992,0.00020219956],"genre_scores_gemma":[0.9942993,0.00003019008,0.0007170062,0.00007278052,0.000055940152,0.000008674682,0.004787232,6.612944e-7,0.000028237864],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9986346,0.00038285734,0.00024219693,0.00033728973,0.000101213445,0.00030184462],"domain_scores_gemma":[0.99948263,0.00019843243,0.00011693162,0.000090516485,0.000030382831,0.00008113091],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00028140473,0.00013525413,0.000229797,0.00003780214,0.00008463136,0.000010858479,0.00028415845,0.00019304492,0.000026192009],"category_scores_gemma":[0.00007585573,0.000056983426,0.00006985974,0.00012364116,0.00007740401,0.000049085636,0.000028189328,0.0001115933,0.000008020778],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00016100715,0.000075978474,0.15761761,0.0000039565507,0.000011064342,9.2240026e-7,0.00003846369,0.000022907265,0.81959957,0.00043434315,0.000028995793,0.022005204],"study_design_scores_gemma":[0.00015738186,0.0008693964,0.9426622,0.000007841677,0.000007688472,0.000014811225,0.00006634031,0.000872035,0.052090883,0.0026048776,0.00048376713,0.00016281489],"about_ca_topic_score_codex":0.0002207524,"about_ca_topic_score_gemma":0.00069086545,"teacher_disagreement_score":0.78504455,"about_ca_system_score_codex":0.00001319395,"about_ca_system_score_gemma":0.000010199113,"threshold_uncertainty_score":0.23237167},"labels":[],"label_agreement":null},{"id":"W2042678023","doi":"10.1186/1471-2229-14-158","title":"OsMYB103L, an R2R3-MYB transcription factor, influences leaf rolling and mechanical strength in rice (Oryza sativaL.)","year":2014,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Polysaccharides and Plant Cell Walls","field":"Agricultural and Biological Sciences","cited_by":131,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Institute of Botany, Chinese Academy of Sciences; Institute of Genetics and Developmental Biology, Chinese Academy of Sciences; Chinese Academy of Sciences; Institute of Genetics; National Natural Science Foundation of China","keywords":"Biology; MYB; Oryza; Oryza sativa; Transcription factor; Botany; Gene; Genetics","score_opus":0.03814255571186014,"score_gpt":0.23385472083871844,"score_spread":0.1957121651268583,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2042678023","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9989025,0.00018213382,0.000033506567,0.00013003855,0.00014801811,0.00012636544,0.00028494865,0.0000522807,0.00014019867],"genre_scores_gemma":[0.99893755,0.00025428028,0.00014295413,0.00020816416,0.00016967877,0.0000070709016,0.0002524454,0.0000010117759,0.000026835816],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99859554,0.00031473913,0.00027873446,0.0003599606,0.00008502983,0.0003659912],"domain_scores_gemma":[0.999119,0.0005982041,0.00008683421,0.000053703337,0.000013815998,0.0001284452],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00036731758,0.00018003605,0.00027815936,0.00002847991,0.00011290292,0.000042786032,0.00021634596,0.0002405755,0.00012064935],"category_scores_gemma":[0.00006497477,0.00007299111,0.000045549757,0.00012321441,0.00005552173,0.00014015206,0.000030581137,0.00018104732,0.000014696614],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009020957,0.000052388597,0.05537325,0.0000085700985,0.000005500696,0.0000016911096,0.00010818038,0.0000048064135,0.92483914,0.0015315313,0.000012312687,0.017972406],"study_design_scores_gemma":[0.0010690663,0.0022752068,0.9171984,0.000092358474,0.000035158195,0.00011162393,0.00073770125,0.0053821364,0.043614663,0.0068199337,0.021606484,0.0010572739],"about_ca_topic_score_codex":0.0017582478,"about_ca_topic_score_gemma":0.009424261,"teacher_disagreement_score":0.8812245,"about_ca_system_score_codex":0.000010942471,"about_ca_system_score_gemma":0.000008054143,"threshold_uncertainty_score":0.52589583},"labels":[],"label_agreement":null},{"id":"W2043609354","doi":"10.1186/1471-2229-13-14","title":"Transcriptional programming during cell wall maturation in the expanding Arabidopsis stem","year":2013,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Polysaccharides and Plant Cell Walls","field":"Agricultural and Biological Sciences","cited_by":45,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canada's Michael Smith Genome Sciences Centre; University of British Columbia","funders":"Natural Sciences and Engineering Research Council of Canada; Genome Canada","keywords":"Arabidopsis; Biology; Stem cell; Inflorescence; Gene expression profiling; Arabidopsis thaliana; Cell biology; Silique; Gene; Developmental biology; Genetics; Gene expression; Botany; Mutant","score_opus":0.027364446120043878,"score_gpt":0.20271192522215375,"score_spread":0.17534747910210988,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2043609354","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99871993,0.0001788465,0.0000071534582,0.00039607318,0.00009886831,0.0002975256,0.000058224086,0.000029289102,0.00021408328],"genre_scores_gemma":[0.99909204,0.00005669193,0.00007539182,0.00014688539,0.00013601723,0.000061868064,0.00026003044,5.493339e-7,0.00017053624],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9991019,0.00012410877,0.00019897702,0.00020177179,0.00007440463,0.0002988744],"domain_scores_gemma":[0.999619,0.00023920683,0.00006116832,0.00003461169,0.00001082712,0.000035205107],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00019744103,0.00010819633,0.00011735413,0.000015956342,0.00012940718,0.00006770133,0.00021279829,0.00010652784,0.0002126612],"category_scores_gemma":[0.000004230305,0.000034327193,0.000056454635,0.00012074986,0.00002263836,0.00009776812,0.000014625182,0.00011913231,0.000075136355],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00003900104,0.000039742914,0.02561304,0.000010867718,0.000002621106,0.0000029497007,0.0001830779,0.0000047234844,0.9686003,0.00021361465,0.000084495055,0.005205615],"study_design_scores_gemma":[0.00035301308,0.0001933235,0.96441793,0.00003942115,0.000011386075,0.00012590254,0.0014685573,0.00046826238,0.019593686,0.0004238207,0.012532353,0.00037235676],"about_ca_topic_score_codex":0.000833442,"about_ca_topic_score_gemma":0.0012640206,"teacher_disagreement_score":0.94900656,"about_ca_system_score_codex":0.000013985258,"about_ca_system_score_gemma":0.000004228476,"threshold_uncertainty_score":0.23284909},"labels":[],"label_agreement":null},{"id":"W2045253069","doi":"10.1186/1471-2229-14-95","title":"Evolution of gene structure in the conifer Picea glauca: a comparative analysis of the impact of intron size","year":2014,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"RNA Research and Splicing","field":"Biochemistry, Genetics and Molecular Biology","cited_by":53,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia; Canada's Michael Smith Genome Sciences Centre; Université Laval","funders":"Natural Sciences and Engineering Research Council of Canada; Genome British Columbia; Génome Québec; Genome Canada","keywords":"Intron; Biology; Genome; Gene; Genetics; Exon; Group II intron; Genome size; Group I catalytic intron; Gene density; Genome evolution; RNA splicing; RNA","score_opus":0.014117941238334665,"score_gpt":0.2979272575411741,"score_spread":0.28380931630283945,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2045253069","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9987478,0.00022669625,0.0004971164,0.000012042243,0.000016490889,0.00012293531,0.00031854218,6.228749e-7,0.000057740297],"genre_scores_gemma":[0.99972427,0.000012842723,0.00008331413,0.000011326336,0.000027000706,0.00000275564,0.00012240415,0.0000016979313,0.000014385295],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99906605,0.0003935048,0.00020883049,0.00012898649,0.0000635991,0.0001390532],"domain_scores_gemma":[0.99935603,0.00014553774,0.00015898132,0.00026142164,0.000061454666,0.000016554983],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00026460437,0.000076442564,0.00027392054,0.000060804792,0.000019506282,0.0000016808709,0.00024440093,0.000104978055,0.000011373185],"category_scores_gemma":[0.00016639978,0.000037064507,0.00014831092,0.00023418512,0.00016718051,0.000001200302,0.000045910267,0.000073541974,1.4127541e-7],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00017219984,0.00002022516,0.28794298,0.0000054615407,0.00017173118,4.491275e-8,0.00007045946,0.0007666415,0.71057236,0.0002221576,0.000040579034,0.000015148132],"study_design_scores_gemma":[0.00037873661,0.00043292774,0.825479,0.0000050052367,0.00006670467,0.000003976667,0.00011974413,0.0023902282,0.17092581,0.00012208184,0.000028374841,0.000047418565],"about_ca_topic_score_codex":0.0014010501,"about_ca_topic_score_gemma":0.0022795903,"teacher_disagreement_score":0.53964657,"about_ca_system_score_codex":0.000014052939,"about_ca_system_score_gemma":0.00008474275,"threshold_uncertainty_score":0.21179782},"labels":[],"label_agreement":null},{"id":"W2046838743","doi":"10.1186/1471-2229-8-52","title":"A flax fibre proteome: identification of proteins enriched in bast fibres","year":2008,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Polysaccharides and Plant Cell Walls","field":"Agricultural and Biological Sciences","cited_by":44,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Bast fibre; Biology; Proteome; Cell wall; Phloem; Secondary cell wall; Galactan; Pectin; Biochemistry; Cell biology; Botany","score_opus":0.03132470356322774,"score_gpt":0.21645394892455916,"score_spread":0.1851292453613314,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2046838743","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9985322,0.00014414557,0.000016046097,0.00013346593,0.00006371132,0.00042268343,0.00048382775,0.000027222883,0.00017671546],"genre_scores_gemma":[0.9988132,0.00010442497,0.0001284142,0.000030781703,0.000083115265,0.000045799174,0.00043927183,6.2024657e-7,0.0003543451],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99897593,0.00011136313,0.00034695392,0.00024725034,0.00007497338,0.0002435009],"domain_scores_gemma":[0.9995172,0.00019171202,0.00016469759,0.00005852223,0.00002309727,0.000044745877],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00021926822,0.00011051717,0.0002142927,0.000028627006,0.00006575413,0.0000065675736,0.00021961992,0.00014745833,0.00018014235],"category_scores_gemma":[0.0000690782,0.00004363259,0.000056081484,0.00022536595,0.00007072818,0.000053663258,0.000043655447,0.000086296524,0.00003761145],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000070345806,0.00005097559,0.058998562,0.000012903545,0.0000037281518,0.000005377145,0.00005519748,0.0000028413517,0.93932104,0.0001699115,0.00018518596,0.0011239585],"study_design_scores_gemma":[0.00024841653,0.0003471112,0.74841154,0.00003025707,0.0000046361415,0.000108148415,0.000063345164,0.0002072915,0.24499036,0.00055046525,0.0048053116,0.0002330947],"about_ca_topic_score_codex":0.0010481571,"about_ca_topic_score_gemma":0.0015992497,"teacher_disagreement_score":0.69433063,"about_ca_system_score_codex":0.000010958973,"about_ca_system_score_gemma":0.000019836056,"threshold_uncertainty_score":0.19724324},"labels":[],"label_agreement":null},{"id":"W2047589608","doi":"10.1186/s12870-014-0357-5","title":"Synchrotron based phase contrast X-ray imaging combined with FTIR spectroscopy reveals structural and biomolecular differences in spikelets play a significant role in resistance to Fusarium in wheat","year":2015,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Spectroscopy Techniques in Biomedical and Chemical Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":43,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan; Plant Biotechnology Institute; Agriculture and Agri-Food Canada; Natural Sciences and Engineering Research Council of Canada; Canadian Light Source (Canada)","funders":"National Research Council Canada; Western Economic Diversification Canada; Agriculture and Agri-Food Canada; Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research; University of Saskatchewan; Canadian Light Source","keywords":"Cultivar; Biology; Fusarium; Fourier transform infrared spectroscopy; Plant disease resistance; Inoculation; Horticulture; Botany; Agronomy; Gene","score_opus":0.01257348287368737,"score_gpt":0.29740446873609844,"score_spread":0.28483098586241107,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2047589608","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9964584,0.00057580264,0.0016330878,0.00043338677,0.00003295016,0.00055668945,0.0001440191,0.000016158803,0.0001495235],"genre_scores_gemma":[0.99427086,0.000039290942,0.0049349917,0.00024080226,0.00004043695,0.000121439145,0.0003163676,0.000014820437,0.000020976564],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99799246,0.00020749695,0.00035090497,0.00064991036,0.00016757601,0.00063165807],"domain_scores_gemma":[0.9993349,0.000075403674,0.00006202094,0.00024993,0.00003777534,0.00024001022],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003981006,0.00025052737,0.00041170063,0.00021470054,0.000023662436,0.000023955321,0.0002879207,0.00019514558,0.000008234615],"category_scores_gemma":[0.00021771558,0.00018784648,0.000026518286,0.00027388596,0.00030833005,0.000005590645,0.000109281675,0.00024066147,0.0000010285727],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0032914623,0.000115251074,0.11420147,0.00002444575,0.0000055067317,0.00006812925,0.000028930734,0.0000010465465,0.8819762,0.0000921972,0.00013412778,0.000061264705],"study_design_scores_gemma":[0.005238344,0.0020160933,0.020310039,0.0001464099,0.0000050806275,0.000013718191,0.00008661671,0.00057528063,0.9700308,0.0007574502,0.00044520138,0.00037499142],"about_ca_topic_score_codex":0.0002174159,"about_ca_topic_score_gemma":0.001049031,"teacher_disagreement_score":0.093891434,"about_ca_system_score_codex":0.00009572651,"about_ca_system_score_gemma":0.00018558267,"threshold_uncertainty_score":0.7660157},"labels":[],"label_agreement":null},{"id":"W2048445341","doi":"10.1186/s12870-014-0329-9","title":"Evaluation and integration of functional annotation pipelines for newly sequenced organisms: the potato genome as a test case","year":2014,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Bioinformatics and Genomic Networks","field":"Biochemistry, Genetics and Molecular Biology","cited_by":31,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"FP7 Food, Agriculture and Fisheries, Biotechnology; Tel Aviv University; Azrieli Foundation; Stiftelsen för Strategisk Forskning","keywords":"Biology; Genome; Computational biology; Annotation; Test (biology); Whole genome sequencing; Genetics; Gene; Botany","score_opus":0.025314641871848894,"score_gpt":0.26540196178040226,"score_spread":0.24008731990855336,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2048445341","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.77537453,0.00025079775,0.22336791,0.00013387663,0.00013795351,0.00043082796,0.00016786186,0.0000049832615,0.00013126693],"genre_scores_gemma":[0.9955512,0.000032084918,0.0024126763,0.00022575108,0.00022100314,0.000044594562,0.0014646878,0.0000059212152,0.00004208181],"study_design_codex":"bench_or_experimental","study_design_gemma":"simulation_or_modeling","domain_scores_codex":[0.999418,0.00007402894,0.00021237688,0.00014415351,0.00004931538,0.000102099344],"domain_scores_gemma":[0.99938244,0.00012804559,0.00013801025,0.00012058882,0.00020647117,0.000024422925],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00070671504,0.00008629691,0.0000913613,0.000025525336,0.000083849955,0.000010987811,0.00005268035,0.00010402139,0.000007597738],"category_scores_gemma":[0.00040822115,0.000058400274,0.00002652504,0.000034607496,0.00007500773,0.0000035531543,0.000025538577,0.00003613515,0.0000020627394],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013686526,0.00002016634,0.00034529768,0.000016594635,0.000025054045,2.46601e-7,0.00010898373,0.00042768964,0.985725,0.002251445,0.00028677646,0.010655886],"study_design_scores_gemma":[0.010765904,0.011373951,0.015137174,0.000073105875,0.0007592193,0.006218355,0.0028321173,0.64920324,0.19406323,0.07862734,0.02951922,0.0014271633],"about_ca_topic_score_codex":0.00003763304,"about_ca_topic_score_gemma":0.00037163112,"teacher_disagreement_score":0.79166174,"about_ca_system_score_codex":0.000008168586,"about_ca_system_score_gemma":0.00008840861,"threshold_uncertainty_score":0.2381494},"labels":[],"label_agreement":null},{"id":"W2048880450","doi":"10.1186/1471-2229-13-84","title":"Perturbing the metabolic dynamics of myo-inositol in developing Brassica napus seeds through in vivo methylation impacts its utilization as phytate precursor and affects downstream metabolic pathways","year":2013,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Phytase and its Applications","field":"Agricultural and Biological Sciences","cited_by":23,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ag-West Bio (Canada); National Research Council Canada; Plant Biotechnology Institute","funders":"Canola Council of Canada","keywords":"Raffinose; Phytic acid; Biology; Mesembryanthemum crystallinum; Endosperm; Inositol; Biochemistry; Stachyose; Brassica; Botany; Crassulacean acid metabolism; Sucrose; Photosynthesis","score_opus":0.040462973001626025,"score_gpt":0.2568771958868488,"score_spread":0.2164142228852228,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2048880450","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9958619,0.0021079448,0.000052965846,0.0008089728,0.000055780274,0.00062538276,0.0001654017,0.000023617158,0.000298026],"genre_scores_gemma":[0.99717706,0.0020036036,0.00019504016,0.00017747529,0.000048918973,0.00010277698,0.0002832195,0.0000015575142,0.00001033726],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.998875,0.00022601841,0.00027118216,0.00027086827,0.000074205585,0.0002827329],"domain_scores_gemma":[0.99919516,0.0004802335,0.00017444394,0.00006533326,0.00004434889,0.000040465024],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00020857029,0.0001606061,0.00029292173,0.00004145243,0.00010214172,0.000035603563,0.0001699171,0.00013977394,0.000026177655],"category_scores_gemma":[0.00010127904,0.00006200861,0.000038555252,0.0005344088,0.00006404227,0.00027290333,0.00006607756,0.00010513603,0.000007896489],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000030020832,0.00008636753,0.040385976,0.00002282501,0.000024114308,6.127501e-7,0.0007026479,0.00001586257,0.8832151,0.04822673,0.000062844054,0.02722688],"study_design_scores_gemma":[0.00039045353,0.00014060948,0.75385803,0.000077845325,0.00003056491,0.000020768639,0.00060479244,0.004651989,0.22844586,0.006900716,0.004568346,0.00031004916],"about_ca_topic_score_codex":0.0012469365,"about_ca_topic_score_gemma":0.0064457664,"teacher_disagreement_score":0.713472,"about_ca_system_score_codex":0.000020714811,"about_ca_system_score_gemma":0.000030521525,"threshold_uncertainty_score":0.3596889},"labels":[],"label_agreement":null},{"id":"W2049995491","doi":"10.1186/1471-2229-12-115","title":"The pathway of cell dismantling during programmed cell death in lace plant (Aponogeton madagascariensis) leaves","year":2012,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Cell death mechanisms and regulation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":53,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University","funders":"Natural Sciences and Engineering Research Council of Canada; Sveriges Lantbruksuniversitet; Dalhousie University","keywords":"Biology; Vacuole; Cell biology; Microfilament; Programmed cell death; Actin; Fragmentation (computing); Chloroplast; Cytoskeleton; Mitochondrion; Organelle; Vesicle; Cell; Cytoplasm; Apoptosis; Biochemistry; Membrane","score_opus":0.013701640419395021,"score_gpt":0.2157055092029368,"score_spread":0.20200386878354176,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2049995491","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9963433,0.0023655372,0.00032023885,0.000012420107,0.00028423857,0.00025832397,0.00007237267,0.000010511467,0.00033304625],"genre_scores_gemma":[0.9976296,0.000544315,0.0007961379,0.000012666855,0.00017050476,0.000023195122,0.00036231708,0.000016304948,0.00044498633],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99880236,0.00012534994,0.00029033073,0.00025048945,0.000065635286,0.000465831],"domain_scores_gemma":[0.99945223,0.000054435157,0.00015563738,0.00024723785,0.00002199151,0.00006846661],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00035196962,0.00016432842,0.00018280269,0.00004808694,0.00010153174,0.000009709586,0.00015601312,0.0002357945,0.0000028475063],"category_scores_gemma":[0.000021933105,0.00011076375,0.000080036574,0.000055299068,0.000060782815,0.0000032381554,0.00011521638,0.0000945429,0.0000032702292],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001929205,0.000093101706,0.04618518,0.000045948393,0.000009653707,0.0000017021911,0.00009755688,0.000047034235,0.9523378,0.00064974074,0.000012983447,0.00032636983],"study_design_scores_gemma":[0.00057463,0.00014200967,0.021497533,0.000014076918,0.000011808792,0.000029615567,0.00016923489,0.00017151397,0.9701997,0.000052603395,0.006965425,0.00017183597],"about_ca_topic_score_codex":0.000052770916,"about_ca_topic_score_gemma":0.00022131836,"teacher_disagreement_score":0.024687646,"about_ca_system_score_codex":0.000014163907,"about_ca_system_score_gemma":0.00004474905,"threshold_uncertainty_score":0.4516815},"labels":[],"label_agreement":null},{"id":"W2054501109","doi":"10.1186/1471-2229-11-144","title":"Identification and characterization of the Non-race specific Disease Resistance 1 (NDR1) orthologous protein in coffee","year":2011,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Plant-Microbe Interactions and Immunity","field":"Agricultural and Biological Sciences","cited_by":28,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval; Center for Northern Studies","funders":"Coordenação de Aperfeiçoamento de Pessoal de Nível Superior; Institut National de la Santé et de la Recherche Médicale; University of Minnesota; Centre National de la Recherche Scientifique; Ohio State University","keywords":"Biology; Arabidopsis; Coffea arabica; Pseudomonas syringae; Genetics; Gene; Plant disease resistance; Mutant; Complementary DNA; Hypersensitive response; Coffea; Botany","score_opus":0.028723594348766777,"score_gpt":0.20534427977315897,"score_spread":0.1766206854243922,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2054501109","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99890774,0.00004966551,0.000011074367,0.00012602337,0.000102544785,0.00025302343,0.0004385205,0.000008498355,0.000102925274],"genre_scores_gemma":[0.999229,0.000078474695,0.000025657288,0.000019086125,0.00002031138,0.000019778308,0.00022576796,4.4556623e-7,0.0003814847],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9993883,0.0001301918,0.00019419189,0.00015331879,0.000028882423,0.000105156025],"domain_scores_gemma":[0.9996861,0.00004828224,0.00014854576,0.00006976667,0.000024357487,0.000022953322],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013604738,0.00006634171,0.00009820614,0.000013953755,0.00007842405,0.000008948976,0.00014932813,0.000055091714,0.000053758868],"category_scores_gemma":[0.00002852961,0.000024582792,0.000024046903,0.00011971744,0.00008557465,0.00006356785,0.000046034867,0.00007622687,0.0000070518977],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013323354,0.000053142187,0.0912187,0.0000063843577,0.0000015140171,9.3426456e-7,0.000049812286,2.014036e-8,0.9076719,0.00025409154,0.00002285314,0.0005873573],"study_design_scores_gemma":[0.000055393608,0.000024549186,0.9437594,0.000033533997,0.0000024218875,0.0000052186438,0.00003376328,0.000006552638,0.053212877,0.00016460437,0.0026456376,0.000056092624],"about_ca_topic_score_codex":0.000103787286,"about_ca_topic_score_gemma":0.001652136,"teacher_disagreement_score":0.8544591,"about_ca_system_score_codex":0.000008592009,"about_ca_system_score_gemma":0.000006962509,"threshold_uncertainty_score":0.100245714},"labels":[],"label_agreement":null},{"id":"W2054570836","doi":"10.1186/1471-2229-12-75","title":"Inhibition of phenylpropanoid biosynthesis increases cell wall digestibility, protoplast isolation, and facilitates sustained cell division in American elm (Ulmus americana)","year":2012,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Plant Gene Expression Analysis","field":"Biochemistry, Genetics and Molecular Biology","cited_by":33,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"","keywords":"Protoplast; Biology; Callus; Phenylpropanoid; Phenylalanine ammonia-lyase; Cell wall; Nicotiana tabacum; Biochemistry; Cell division; Botany; Ferulic acid; Dutch elm disease; Cell; Enzyme; Biosynthesis; Peroxidase","score_opus":0.008429481933815349,"score_gpt":0.22982887513996733,"score_spread":0.22139939320615198,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2054570836","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99762636,0.000373096,0.00080423424,0.000039758736,0.000021804846,0.00038379757,0.0005033413,0.000015085797,0.00023253646],"genre_scores_gemma":[0.9972506,0.0002180636,0.0012781126,0.000060661634,0.000037047743,0.000048869122,0.0010163421,0.000013542212,0.00007674216],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9982946,0.00036380303,0.00041212703,0.00044988538,0.00008687241,0.00039271565],"domain_scores_gemma":[0.99903595,0.00017190528,0.0003070054,0.00028690542,0.000060417282,0.00013783973],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00035899642,0.00022863202,0.00038718546,0.00018980443,0.000052145246,0.000008651325,0.00012570791,0.00014396184,0.000016868482],"category_scores_gemma":[0.00028638408,0.00019164161,0.0000724651,0.00021598332,0.00027612224,0.000012600837,0.000183058,0.00008184609,0.000005673998],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013011848,0.00017757133,0.40922397,0.000041910404,0.000008409779,6.5467685e-7,0.000055509467,0.000009020748,0.59000754,0.0000045938023,0.00014793263,0.00019278638],"study_design_scores_gemma":[0.0006196218,0.00049230654,0.11459926,0.000025693118,0.00002978392,0.0000102440135,0.00057936355,0.00023316378,0.8813431,0.000032847198,0.0017241277,0.00031046395],"about_ca_topic_score_codex":0.0012657597,"about_ca_topic_score_gemma":0.00038727216,"teacher_disagreement_score":0.2946247,"about_ca_system_score_codex":0.000023647553,"about_ca_system_score_gemma":0.00006323166,"threshold_uncertainty_score":0.78149176},"labels":[],"label_agreement":null},{"id":"W2055271547","doi":"10.1186/1471-2229-11-10","title":"Field transcriptome revealed critical developmental and physiological transitions involved in the expression of growth potential in japonicarice","year":2011,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Plant Molecular Biology Research","field":"Agricultural and Biological Sciences","cited_by":130,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Institute of Genetics; Ministry of Agriculture, Forestry and Fisheries; Ministry of Education, Culture, Sports, Science and Technology","keywords":"Biology; Transcriptome; Expression (computer science); Field (mathematics); Computational biology; Cell biology; Gene expression; Evolutionary biology; Genetics; Gene","score_opus":0.07091859186636332,"score_gpt":0.26173545968133666,"score_spread":0.19081686781497334,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2055271547","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9987951,0.00012097747,0.00002334862,0.00050625514,0.000028354558,0.000189719,0.00013153344,0.000009548534,0.00019519302],"genre_scores_gemma":[0.9990075,0.00007931941,0.00045577332,0.00026020664,0.000019414436,0.000031362822,0.00014401281,4.948761e-7,0.000001875127],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9985011,0.0006084309,0.00024969704,0.00027536205,0.000070914604,0.0002944931],"domain_scores_gemma":[0.9993247,0.0005507835,0.000027510143,0.0000359205,0.000018939461,0.000042154745],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00036685294,0.000108381,0.00021565985,0.00003350444,0.00005919885,0.0000049526448,0.00028555328,0.00024077646,0.00008454832],"category_scores_gemma":[0.00016051704,0.00003824714,0.000046673296,0.00018059739,0.0002209559,0.00003636502,0.00005113033,0.00023739897,0.0000026696619],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003150766,0.00015427943,0.075455494,0.000008800837,0.0000027233725,0.000030475172,0.0002362903,4.1145668e-8,0.9228327,0.00081049977,0.000036038058,0.0001175307],"study_design_scores_gemma":[0.0003761177,0.0007316765,0.975311,0.000037711936,0.000006213966,0.00009353884,0.00071316655,0.000021174637,0.020566866,0.0019611306,0.00003351924,0.0001478732],"about_ca_topic_score_codex":0.00050833146,"about_ca_topic_score_gemma":0.0026679337,"teacher_disagreement_score":0.9022659,"about_ca_system_score_codex":0.00000792036,"about_ca_system_score_gemma":0.000014399104,"threshold_uncertainty_score":0.18570885},"labels":[],"label_agreement":null},{"id":"W2058186071","doi":"10.1186/s12870-014-0408-y","title":"Association mapping of QTLs for sclerotinia stem rot resistance in a collection of soybean plant introductions using a genotyping by sequencing (GBS) approach","year":2015,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Plant pathogens and resistance mechanisms","field":"Agricultural and Biological Sciences","cited_by":130,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Université Laval","funders":"Natural Sciences and Engineering Research Council of Canada; Fonds Québécois de la Recherche sur la Nature et les Technologies","keywords":"Biology; Sclerotinia; Germplasm; Genotyping; Association mapping; Stem rot; Sclerotinia sclerotiorum; Plant disease resistance; Genetics; Microsatellite; Inoculation; Genetic marker; Quantitative trait locus; Biotechnology; Single-nucleotide polymorphism; Allele; Genotype; Horticulture; Gene","score_opus":0.09083356826366135,"score_gpt":0.22947119294807608,"score_spread":0.13863762468441473,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2058186071","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99373335,0.00031981003,0.0032740217,0.000057187364,0.00023440048,0.00048045252,0.001777163,0.00002100098,0.000102646845],"genre_scores_gemma":[0.9912879,0.00002807819,0.0076952535,0.000014498766,0.00017328553,0.000037460693,0.00060106855,0.0000017993044,0.00016064297],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99871266,0.00018712213,0.0004252933,0.0002871633,0.00011018804,0.00027758675],"domain_scores_gemma":[0.99917954,0.00018949008,0.0004400575,0.000045897355,0.00009963861,0.000045358272],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009627555,0.00011701985,0.0003355028,0.000054108936,0.0001069653,0.000009189453,0.00012167852,0.00018426635,0.0000023652876],"category_scores_gemma":[0.00012062342,0.000059249753,0.0000613592,0.00036048592,0.000027642182,0.00004902909,0.000026281512,0.00008180815,3.2256278e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00017199363,0.00004389641,0.010159262,0.000045588917,0.000015413352,2.448281e-7,0.00019331487,0.000068416026,0.9881921,0.0006294208,0.00040249818,0.00007785896],"study_design_scores_gemma":[0.00894312,0.0030130325,0.08035664,0.0020831386,0.0003996496,0.00027489252,0.031755444,0.0632677,0.7683997,0.010277292,0.02756541,0.0036639853],"about_ca_topic_score_codex":0.00027491507,"about_ca_topic_score_gemma":0.003739299,"teacher_disagreement_score":0.2197924,"about_ca_system_score_codex":0.00022566256,"about_ca_system_score_gemma":0.000057920028,"threshold_uncertainty_score":0.24161348},"labels":[],"label_agreement":null},{"id":"W2058871708","doi":"10.1186/1471-2229-11-47","title":"Introgression potential between safflower (Carthamus tinctorius) and wild relatives of the genus Carthamus","year":2011,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Sunflower and Safflower Cultivation","field":"Agricultural and Biological Sciences","cited_by":39,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"Natural Sciences and Engineering Research Council of Canada; University of Alberta","keywords":"Carthamus; Biology; Introgression; Hybrid; Gene flow; Botany; Genetic variation; Genetics; Gene; Traditional medicine","score_opus":0.0373918525216191,"score_gpt":0.21073129010946443,"score_spread":0.1733394375878453,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2058871708","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9981928,0.00024958423,0.000017045339,0.00008623494,0.00040616174,0.0001632916,0.00019877763,0.000029563733,0.0006565466],"genre_scores_gemma":[0.9993573,0.00003162832,0.00014631535,0.00003187377,0.00025818145,0.000005620267,0.00011214536,0.0000010542203,0.00005590826],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9989963,0.00019329299,0.00023878319,0.00026221556,0.00009551968,0.00021386302],"domain_scores_gemma":[0.9995186,0.00016707189,0.00013889435,0.000076323944,0.0000407098,0.000058433114],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00017809814,0.00013587823,0.00020512716,0.000014071365,0.00014979915,0.000007810472,0.00020301245,0.00018802605,0.0001690643],"category_scores_gemma":[0.00007052303,0.000043105727,0.000083725485,0.00013532068,0.00019447955,0.00006250563,0.00012980158,0.00012569048,0.000006503557],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011413485,0.000044824938,0.85399103,0.0000049320297,0.000027163967,0.00000196872,0.00041402012,3.225596e-7,0.12272884,0.00034338297,0.0001245416,0.022204848],"study_design_scores_gemma":[0.00019092618,0.00021870188,0.98728603,0.00002037007,0.00002337446,0.000015810618,0.00013791483,0.000009772323,0.0070879804,0.00042484945,0.004460741,0.00012353247],"about_ca_topic_score_codex":0.00029207813,"about_ca_topic_score_gemma":0.00034206497,"teacher_disagreement_score":0.133295,"about_ca_system_score_codex":0.0000071104937,"about_ca_system_score_gemma":0.000008934726,"threshold_uncertainty_score":0.18511355},"labels":[],"label_agreement":null},{"id":"W2059943609","doi":"10.1186/1471-2229-10-140","title":"Identification and characterization of genes associated with tapping panel dryness from Hevea brasiliensis latex using suppression subtractive hybridization","year":2010,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Plant biochemistry and biosynthesis","field":"Biochemistry, Genetics and Molecular Biology","cited_by":78,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Chinese Academy of Tropical Agricultural Sciences; Institute of Genetics; National Natural Science Foundation of China; University of Miami","keywords":"Hevea brasiliensis; Suppression subtractive hybridization; Biology; Gene; Genetics; Complementary DNA; cDNA library; Expressed sequence tag; WRKY protein domain; Gene expression; Computational biology; Natural rubber; Transcriptome","score_opus":0.018559933578039686,"score_gpt":0.22529914837572285,"score_spread":0.20673921479768315,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2059943609","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9962911,0.000040163966,0.0018494992,0.000014030176,0.00012617718,0.0001285394,0.0015273838,0.000013170908,0.000009956314],"genre_scores_gemma":[0.9906321,0.000075039745,0.00023932997,0.000017366556,0.0000985307,0.000005341506,0.008899404,0.000011143462,0.000021747044],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.999101,0.000090849906,0.000229472,0.00036374363,0.000062844374,0.00015212863],"domain_scores_gemma":[0.9992894,0.00006964873,0.00032571936,0.00017193188,0.000100346566,0.000042984153],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014449355,0.00015239953,0.00018719099,0.0000408852,0.00008590186,0.000016604934,0.000096789976,0.00031004517,0.000008161704],"category_scores_gemma":[0.0001418512,0.00012366388,0.000028599034,0.00007241897,0.0001137799,0.00001229721,0.000046452013,0.000079115256,5.7681956e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015710486,0.00004438392,0.1142978,0.000013232036,0.000048304588,9.415434e-7,0.000018654298,0.0000037826728,0.8851329,0.0000065790227,0.0000032134133,0.00027309672],"study_design_scores_gemma":[0.00022191263,0.000035089735,0.141672,0.00003327102,0.000043857617,0.000024920164,0.000021487951,0.0007368331,0.8569619,0.0000071649747,0.000094640825,0.00014692356],"about_ca_topic_score_codex":0.00005031906,"about_ca_topic_score_gemma":0.00012700897,"teacher_disagreement_score":0.02817101,"about_ca_system_score_codex":0.0000049045866,"about_ca_system_score_gemma":0.000051267016,"threshold_uncertainty_score":0.5042867},"labels":[],"label_agreement":null},{"id":"W2060367823","doi":"10.1186/1471-2229-10-174","title":"Transcription profiling of fertilization and early seed development events in a solanaceous species using a 7.7 K cDNA microarray from Solanum chacoenseovules","year":2010,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Plant Molecular Biology Research","field":"Agricultural and Biological Sciences","cited_by":12,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Université du Québec à Montréal","funders":"Natural Sciences and Engineering Research Council of Canada; Fonds Québécois de la Recherche sur la Nature et les Technologies","keywords":"Biology; Gene; Ovule; Genetics; Gene expression profiling; Gene expression; DNA microarray; Microarray analysis techniques; Embryo; Complementary DNA; Expressed sequence tag","score_opus":0.041949729252123716,"score_gpt":0.24095483116704233,"score_spread":0.1990051019149186,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2060367823","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9991229,0.0001323259,0.00008490326,0.00005809139,0.000100050835,0.00025850075,0.00021176827,0.000017944369,0.000013510198],"genre_scores_gemma":[0.99714506,0.000028049451,0.002079591,0.000020594063,0.000046835263,0.000008839491,0.00065589993,0.0000011526266,0.000013961087],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9988547,0.00017219188,0.00027883405,0.00031107094,0.000076072756,0.0003071411],"domain_scores_gemma":[0.99961275,0.00015362342,0.0000906117,0.000042224456,0.000032895234,0.00006788036],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00031994586,0.00012912769,0.00023487477,0.00004904715,0.000076741024,0.000008344633,0.00014296804,0.000241997,0.000018138726],"category_scores_gemma":[0.00009910242,0.000059703838,0.000030470263,0.00011980807,0.00009146591,0.000036989935,0.000049707207,0.00017387063,0.0000027072608],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009672012,0.000022791955,0.43368208,0.0000046310633,0.0000064888573,0.0000021027322,0.000082046165,4.0999515e-7,0.56580937,0.000021128873,4.880335e-7,0.00027170716],"study_design_scores_gemma":[0.00019684684,0.000069800255,0.75219584,0.000021315169,0.000004168987,0.000025879724,0.000079283454,0.00015481375,0.24690963,0.000108212414,0.00012711667,0.00010709615],"about_ca_topic_score_codex":0.0009071347,"about_ca_topic_score_gemma":0.012153938,"teacher_disagreement_score":0.31889975,"about_ca_system_score_codex":0.000015271518,"about_ca_system_score_gemma":0.00003902517,"threshold_uncertainty_score":0.6782183},"labels":[],"label_agreement":null},{"id":"W2062158062","doi":"10.1186/1471-2229-10-156","title":"Structure-function relationships of wheat flavone O-methyltransferase: Homology modeling and site-directed mutagenesis","year":2010,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Plant Gene Expression Analysis","field":"Biochemistry, Genetics and Molecular Biology","cited_by":29,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Concordia University","funders":"Natural Sciences and Engineering Research Council of Canada; Rural Development Administration","keywords":"Methylation; Active site; Biology; Tricin; Stereochemistry; Homology modeling; Biochemistry; Methyltransferase; Transferase; Enzyme; Chemistry; Flavonoid","score_opus":0.014771837891012714,"score_gpt":0.2319586799331348,"score_spread":0.21718684204212207,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2062158062","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.981085,0.0003581949,0.017375166,0.00003523721,0.00024108024,0.000118217285,0.0006595464,0.00003249519,0.000095069176],"genre_scores_gemma":[0.9919714,0.00017104743,0.0048844996,0.000054803197,0.00012749406,0.0000090634585,0.0026581225,0.0000161137,0.00010748709],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9986488,0.00027795238,0.00032429505,0.00045356277,0.0000655584,0.00022979613],"domain_scores_gemma":[0.9993044,0.00010155086,0.00009392394,0.00032643278,0.000081712686,0.00009193957],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00025210416,0.00018752816,0.0002897977,0.00016586365,0.000115285126,0.0000074553373,0.00013175125,0.0005372925,0.000066214256],"category_scores_gemma":[0.00024097846,0.00016400767,0.0000758521,0.00012303801,0.00011922245,0.0000045873444,0.000064523236,0.00024363649,0.000004039971],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00024695924,0.000018634964,0.035321467,0.000014176101,0.00006514134,0.0000013348599,0.000023615803,0.00039647214,0.96319824,0.00014686908,0.00032468792,0.00024240985],"study_design_scores_gemma":[0.0009008436,0.00024911566,0.007305877,0.000011085836,0.0001540832,0.0002131275,0.00004859412,0.014462815,0.97338676,0.00051699247,0.0023614443,0.00038924755],"about_ca_topic_score_codex":0.00009324299,"about_ca_topic_score_gemma":0.002135346,"teacher_disagreement_score":0.028015591,"about_ca_system_score_codex":0.0000038996563,"about_ca_system_score_gemma":0.000059917515,"threshold_uncertainty_score":0.6688039},"labels":[],"label_agreement":null},{"id":"W2063643147","doi":"10.1186/1471-2229-14-127","title":"Agrobacterium-derived cytokinin influences plastid morphology and starch accumulation in Nicotiana benthamiana during transient assays","year":2014,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Photosynthetic Processes and Mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":38,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"","keywords":"Biology; Agrobacterium; Cell biology; Nicotiana benthamiana; Plastid; Cytokinin; Agrobacterium tumefaciens; Context (archaeology); Chloroplast; Botany; Auxin; Gene; Genetics; Transformation (genetics)","score_opus":0.01922813188235517,"score_gpt":0.25443075045069524,"score_spread":0.23520261856834007,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2063643147","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99690133,0.00010635772,0.0023425075,0.000056602094,0.00014622371,0.00017149192,0.000103306054,0.000015771499,0.00015642043],"genre_scores_gemma":[0.9988788,0.00019834546,0.00037009254,0.00012023367,0.00007808463,0.00002769158,0.00029896875,0.000013734031,0.000014053504],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9986538,0.00015138854,0.00027304082,0.00049083267,0.000057195826,0.00037371373],"domain_scores_gemma":[0.9995487,0.00005623865,0.00009540848,0.00018885749,0.00002537072,0.00008545436],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00022831948,0.00019133087,0.00024384187,0.0001017915,0.00006413369,0.00001364861,0.00016757839,0.0002711815,0.000017643353],"category_scores_gemma":[0.00010742649,0.00017160553,0.000039347546,0.000064214306,0.00010775982,0.0000066071557,0.000078335564,0.00010872054,0.0000043589416],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003202273,0.000034723205,0.015229486,0.000038317146,0.000014582493,0.0000031501406,0.000067390545,0.00008108018,0.9837862,0.00018883936,0.0000045051233,0.00023149324],"study_design_scores_gemma":[0.001259158,0.0007328517,0.11265277,0.000030371786,0.000013761935,0.0001351104,0.000067159766,0.00032097808,0.8827667,0.00021802892,0.0015182707,0.00028480034],"about_ca_topic_score_codex":0.00014154105,"about_ca_topic_score_gemma":0.00096017326,"teacher_disagreement_score":0.101019464,"about_ca_system_score_codex":0.000014452945,"about_ca_system_score_gemma":0.000067117115,"threshold_uncertainty_score":0.699787},"labels":[],"label_agreement":null},{"id":"W2064790007","doi":"10.1186/1471-2229-9-68","title":"Identification and expression analysis of WRKY transcription factor genes in canola (Brassica napus L.) in response to fungal pathogens and hormone treatments","year":2009,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Plant Gene Expression Analysis","field":"Biochemistry, Genetics and Molecular Biology","cited_by":213,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"Natural Sciences and Engineering Research Council of Canada; Alberta Agricultural Research Institute","keywords":"WRKY protein domain; Biology; Canola; Arabidopsis; Genetics; Gene; Abscisic acid; Arabidopsis thaliana; Pathosystem; Botany","score_opus":0.013988787530356013,"score_gpt":0.26126697012420896,"score_spread":0.24727818259385295,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2064790007","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9974945,0.0010342189,0.00044454026,0.00006981908,0.000021828115,0.00016163483,0.000761371,0.000004961225,0.000007091293],"genre_scores_gemma":[0.9980742,0.00081980217,0.00030487802,0.00004673234,0.000013008289,0.000016384109,0.0006326694,0.000004812985,0.00008755857],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9986598,0.00032223112,0.00033783598,0.00043391384,0.000065692235,0.00018055951],"domain_scores_gemma":[0.9995448,0.00004372985,0.000106291925,0.00020578055,0.000022064434,0.00007730752],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00022899004,0.00014568708,0.0003153893,0.00055861624,0.000027842902,0.000009347288,0.00008771536,0.00019977687,0.000003381722],"category_scores_gemma":[0.00007436375,0.00012462834,0.000059012375,0.0003273258,0.000031704607,0.000006051526,0.000030321447,0.000045215707,6.0524627e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0015518952,0.00007654455,0.09203847,0.000002859657,0.00006419798,0.0000050308645,0.00013099122,0.000052747037,0.9044996,0.0000027161097,0.00006542475,0.0015095087],"study_design_scores_gemma":[0.00051632005,0.00022499329,0.5518425,0.000009180583,0.00008389272,0.000006008057,0.00005095566,0.00024489083,0.4466826,0.0000065463723,0.00022350022,0.000108576605],"about_ca_topic_score_codex":0.0000713227,"about_ca_topic_score_gemma":0.0010678825,"teacher_disagreement_score":0.45980406,"about_ca_system_score_codex":0.000019876852,"about_ca_system_score_gemma":0.00002991185,"threshold_uncertainty_score":0.5082196},"labels":[],"label_agreement":null},{"id":"W2064941641","doi":"10.1186/1471-2229-5-s1-s11","title":"Production of nitric oxide and reactions with plant hemoglobins under hypoxic stress","year":2005,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Hemoglobin structure and function","field":"Biochemistry, Genetics and Molecular Biology","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Winnipeg; University of Manitoba","funders":"","keywords":"Hemoglobin; Biology; Heme; Nitric oxide; Methemoglobin; Biochemistry; Nitrite; Nitrate; Hemeprotein; Cell culture; Oxygen; Chemistry; Endocrinology; Genetics","score_opus":0.011498420563560945,"score_gpt":0.21859915056586612,"score_spread":0.20710073000230517,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2064941641","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9974337,0.00033098462,0.0013389961,0.00008512384,0.000117728014,0.0001482559,0.0001956345,0.000015738724,0.00033383162],"genre_scores_gemma":[0.9965831,0.00023123319,0.0016703537,0.00008470929,0.00029201753,0.000011315445,0.00075342157,0.0000101446585,0.00036367463],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99922496,0.000050278806,0.00018040364,0.00031660375,0.000049656108,0.00017811028],"domain_scores_gemma":[0.99958205,0.000018532075,0.000104676634,0.00020228764,0.000041745563,0.000050717816],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00008023063,0.00013255604,0.0001494629,0.00006867457,0.00005937554,0.000004991895,0.00006163167,0.00017577283,0.000009218179],"category_scores_gemma":[0.0000328336,0.00009918165,0.000028517445,0.00008334859,0.000109164044,0.0000052982205,0.00003244231,0.000075966185,0.0000029313865],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00031612755,0.000051331688,0.031628735,0.000029285944,0.00005371443,7.638964e-7,0.000010019377,0.00021627286,0.96540457,0.00042282458,0.0009918051,0.00087456725],"study_design_scores_gemma":[0.0008834994,0.00051803363,0.085614294,0.000033134365,0.00007194336,0.0009814872,0.00017574833,0.00005807909,0.8533247,0.00014587975,0.057856057,0.00033711956],"about_ca_topic_score_codex":0.00006390241,"about_ca_topic_score_gemma":0.00037454514,"teacher_disagreement_score":0.11207983,"about_ca_system_score_codex":0.0000129099135,"about_ca_system_score_gemma":0.000057990506,"threshold_uncertainty_score":0.404451},"labels":[],"label_agreement":null},{"id":"W2065427192","doi":"10.1186/1471-2229-13-80","title":"Transcriptome resources and functional characterization of monoterpene synthases for two host species of the mountain pine beetle, lodgepole pine (Pinus contorta) and jack pine (Pinus banksiana)","year":2013,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Plant biochemistry and biosynthesis","field":"Biochemistry, Genetics and Molecular Biology","cited_by":60,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of Alberta; Canada's Michael Smith Genome Sciences Centre; University of British Columbia","funders":"Canada's Michael Smith Genome Sciences Centre; BC Cancer Agency; Génome Québec; Natural Sciences and Engineering Research Council of Canada; McGill University","keywords":"Pinus contorta; Biology; Dendroctonus; Mountain pine beetle; Botany; Monoterpene; Transcriptome; Oleoresin; Terpene; Bark beetle; Gene; Ecology; Genetics; Gene expression; Biochemistry","score_opus":0.013658605428563522,"score_gpt":0.20925517091628948,"score_spread":0.19559656548772597,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2065427192","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9937748,0.00074677425,0.00045589425,0.00037386507,0.00010773472,0.00039294036,0.0040603173,0.000007967119,0.000079705394],"genre_scores_gemma":[0.99718404,0.0002932781,0.00016579896,0.00012378224,0.00021866238,0.000040530907,0.001399111,0.000011934751,0.0005628343],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9989233,0.00007049896,0.00034613154,0.00035952785,0.00007478505,0.00022573753],"domain_scores_gemma":[0.99930435,0.00008483926,0.00024089875,0.00021758047,0.000090076326,0.0000622298],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001344446,0.00021385298,0.00033495476,0.00004770848,0.0000830348,0.000015073721,0.00014993655,0.00021058766,0.000048970083],"category_scores_gemma":[0.00011521004,0.00015387975,0.000085827676,0.00006248816,0.00036335393,0.000009659894,0.00007121161,0.000056980924,6.8998077e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0004770184,0.00006242389,0.007540535,0.00011378471,0.000084745894,4.1947933e-7,0.000026902599,0.0000010328232,0.9910689,0.00010153541,0.00023942285,0.0002832575],"study_design_scores_gemma":[0.0007986101,0.00029889983,0.1338992,0.000048988542,0.000049087972,0.000062868516,0.00005194116,0.000078735895,0.85775757,0.00001555086,0.0067635225,0.0001750092],"about_ca_topic_score_codex":0.00009655949,"about_ca_topic_score_gemma":0.00010959205,"teacher_disagreement_score":0.13331133,"about_ca_system_score_codex":0.0000067463557,"about_ca_system_score_gemma":0.000039549155,"threshold_uncertainty_score":0.62750345},"labels":[],"label_agreement":null},{"id":"W2066256802","doi":"10.1186/1471-2229-12-160","title":"Mutation of the cytosolic ribosomal protein-encoding RPS10Bgene affects shoot meristematic function in Arabidopsis","year":2012,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Plant Molecular Biology Research","field":"Agricultural and Biological Sciences","cited_by":33,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Biotechnology and Biological Sciences Research Council; China Scholarship Council; York University","keywords":"Biology; Meristem; Arabidopsis; Axillary bud; Mutant; Ribosomal protein; Primordium; Auxin; Apical dominance; Shoot; Gene; Lateral shoot; Cell biology; Genetics; Botany; Ribosome; RNA; Tissue culture","score_opus":0.035364796402895166,"score_gpt":0.2466497606747296,"score_spread":0.21128496427183444,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2066256802","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9984846,0.0002318936,0.000022490292,0.00016184873,0.0001549377,0.00052830204,0.000082320694,0.000018964047,0.00031462923],"genre_scores_gemma":[0.99949455,0.0000073058577,0.000051705807,0.000045926165,0.00010752945,0.00006925911,0.00017590892,9.252517e-7,0.000046887828],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9984146,0.00064727233,0.00022895112,0.00019851617,0.00010962406,0.00040104438],"domain_scores_gemma":[0.9993913,0.00031420682,0.00014628183,0.00007315611,0.00002110787,0.000053916196],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00057643105,0.00012202966,0.00022536758,0.000031393,0.0000891805,0.000007147194,0.00024211119,0.00018537734,0.00004947266],"category_scores_gemma":[0.00021861668,0.000041325136,0.000076420314,0.00031822213,0.000103411374,0.000055692857,0.00009630917,0.0001455325,0.00002401469],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00005357677,0.000044744676,0.2662403,0.000021905707,0.000008446383,0.0000010039671,0.000025909494,0.0000024275607,0.732658,0.00037756335,0.000015932801,0.00055018574],"study_design_scores_gemma":[0.00020457528,0.00030502738,0.8551973,0.000074397074,0.000014380792,0.00009198264,0.0000992521,0.000084097606,0.14314596,0.0002473555,0.00038242197,0.00015324767],"about_ca_topic_score_codex":0.00014641682,"about_ca_topic_score_gemma":0.0011041582,"teacher_disagreement_score":0.58951205,"about_ca_system_score_codex":0.000025620495,"about_ca_system_score_gemma":0.000015551783,"threshold_uncertainty_score":0.16851902},"labels":[],"label_agreement":null},{"id":"W2066501197","doi":"10.1186/1471-2229-13-91","title":"Genetic variation in four maturity genes affects photoperiod insensitivity and PHYA-regulated post-flowering responses of soybean","year":2013,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Soybean genetics and cultivation","field":"Agricultural and Biological Sciences","cited_by":201,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Japan Society for the Promotion of Science; Agriculture and Agri-Food Canada; National Natural Science Foundation of China; Chinese Academy of Sciences; National Science Foundation","keywords":"Biology; photoperiodism; Locus (genetics); Allele; Arabidopsis; Gene; Genotype; Cultivar; Genetics; Shoot; Phytochrome; Meristem; Abscission; Vernalization; Botany; Mutant","score_opus":0.01920620071492508,"score_gpt":0.2066973394835127,"score_spread":0.18749113876858764,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2066501197","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99926823,0.00017140225,0.0000067521933,0.00010170896,0.000064846645,0.00027299023,0.00007541343,0.000019332092,0.000019332987],"genre_scores_gemma":[0.9993595,0.000032849257,0.0004254114,0.000050043534,0.000047800822,0.000012849111,0.00005625372,8.6160037e-7,0.000014441658],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99919486,0.00020981873,0.00016161254,0.00021656077,0.000049466646,0.00016765638],"domain_scores_gemma":[0.99952793,0.00025878625,0.00008491438,0.00004387099,0.000047748075,0.000036735484],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00016063736,0.00010308263,0.00016657492,0.000024808844,0.00005222308,0.000019003082,0.00006584816,0.00013036931,0.00004446199],"category_scores_gemma":[0.00008462015,0.00004594891,0.00002714515,0.00012127876,0.00004954666,0.000039178576,0.00004749808,0.00005036342,0.000004348988],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000056812787,0.000022217042,0.1315543,0.0000073836295,0.0000041456456,0.0000013737348,0.00005992303,0.0000021201606,0.8613414,0.000026333037,0.000005676372,0.006918289],"study_design_scores_gemma":[0.00014943336,0.00019230237,0.95581317,0.000014102566,0.000003600438,0.000021597141,0.000050730054,0.00073953945,0.042677112,0.0001976946,0.00003905386,0.000101638005],"about_ca_topic_score_codex":0.001645483,"about_ca_topic_score_gemma":0.0023194135,"teacher_disagreement_score":0.82425886,"about_ca_system_score_codex":0.000008924025,"about_ca_system_score_gemma":0.000008459455,"threshold_uncertainty_score":0.2487489},"labels":[],"label_agreement":null},{"id":"W2069328242","doi":"10.1186/s12870-015-0442-4","title":"The E3 ligase OsPUB15 interacts with the receptor-like kinase PID2 and regulates plant cell death and innate immunity","year":2015,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Plant-Microbe Interactions and Immunity","field":"Agricultural and Biological Sciences","cited_by":130,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Institute of Genetics and Developmental Biology, Chinese Academy of Sciences; Institute of Botany, Chinese Academy of Sciences; National Key Research and Development Program of China; Chinese Academy of Agricultural Sciences; Ministry of Agriculture of the People's Republic of China; Chinese Academy of Sciences; Institute of Genetics; National Natural Science Foundation of China","keywords":"Biology; Ubiquitin ligase; Cell biology; Ectopic expression; Kinase; Programmed cell death; Protein kinase domain; Protein kinase A; Signal transduction; Molecular biology; Biochemistry; Ubiquitin; Gene; Mutant; Apoptosis","score_opus":0.02963569164155578,"score_gpt":0.21695991484422605,"score_spread":0.18732422320267028,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2069328242","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99653053,0.00093970663,0.000001048923,0.0013397211,0.00019061535,0.00018099323,0.00044048237,0.00003214037,0.00034475856],"genre_scores_gemma":[0.99802566,0.0006674613,0.000050239294,0.00029313282,0.00007579119,0.0000138861315,0.0004199507,0.0000013615397,0.00045250103],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9988674,0.00036330827,0.000185169,0.00022213825,0.000059873033,0.0003021164],"domain_scores_gemma":[0.9984507,0.0011227893,0.00013982732,0.000116654075,0.00005495763,0.00011507085],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00053445244,0.0001818236,0.00018549869,0.000012949875,0.00057612103,0.00012849894,0.00029435428,0.0001026825,0.000017011202],"category_scores_gemma":[0.000077549135,0.000047030975,0.000028535529,0.0000943418,0.00021027109,0.00010185402,0.00021742328,0.00030256624,0.000015626858],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.001930679,0.0001980208,0.02852176,0.000014182566,0.00007616896,0.000018334418,0.0006923675,0.0000028044126,0.934383,0.0005353614,0.020857172,0.012770175],"study_design_scores_gemma":[0.0011571773,0.0023878943,0.14142548,0.0001192972,0.00006245541,0.0013481379,0.0053331265,0.00025660676,0.10483137,0.00057991606,0.7417955,0.0007030752],"about_ca_topic_score_codex":0.0026231494,"about_ca_topic_score_gemma":0.006425238,"teacher_disagreement_score":0.82955164,"about_ca_system_score_codex":0.000022296068,"about_ca_system_score_gemma":0.00002081559,"threshold_uncertainty_score":0.44311154},"labels":[],"label_agreement":null},{"id":"W2077292985","doi":"10.1186/s12870-014-0250-2","title":"A major quantitative trait locus conferring adult plant partial resistance to crown rust in oat","year":2014,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Wheat and Barley Genetics and Pathology","field":"Agricultural and Biological Sciences","cited_by":44,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Agriculture and Agri-Food Canada; University of Saskatchewan","funders":"Agriculture and Agri-Food Canada; Prairie Oat Growers Association; General Mills; Ministry of Agriculture - Saskatchewan; PepsiCo","keywords":"Biology; Quantitative trait locus; Single-nucleotide polymorphism; Genetics; Population; Locus (genetics); SNP; Genotyping; SNP genotyping; Plant disease resistance; SNP array; Genetic linkage; Rust (programming language); Genotype; Gene","score_opus":0.0349481729880969,"score_gpt":0.24337581999259122,"score_spread":0.20842764700449432,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2077292985","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9966295,0.000104836094,0.00012140209,0.0008452668,0.0002357479,0.00019120317,0.0006916428,0.000029739684,0.0011506714],"genre_scores_gemma":[0.99795437,0.000024468261,0.0006826543,0.000577559,0.0002289976,0.00003202142,0.00032033035,0.0000012002221,0.00017838148],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9986132,0.00021322058,0.00027322944,0.00039805562,0.000062759354,0.0004395497],"domain_scores_gemma":[0.99939096,0.0003438841,0.000061898,0.00005895913,0.00003476736,0.00010951245],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002722864,0.00016272691,0.0002944673,0.000027504793,0.000101807746,0.000023836314,0.00022541695,0.00017496092,0.00010809277],"category_scores_gemma":[0.0001029685,0.000067085355,0.00005624559,0.00014450838,0.0000804712,0.000020827178,0.00005622453,0.000116738636,0.000066154105],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00126863,0.0001206757,0.038237892,0.000020279253,0.000013329579,0.00003161959,0.00036392064,0.000018457878,0.897473,0.05543805,0.0017487486,0.005265394],"study_design_scores_gemma":[0.002669997,0.004806225,0.46869162,0.0002688933,0.00004805326,0.00013811466,0.001074756,0.0007658118,0.08537107,0.0068750824,0.4274357,0.0018546905],"about_ca_topic_score_codex":0.000471452,"about_ca_topic_score_gemma":0.046534706,"teacher_disagreement_score":0.81210196,"about_ca_system_score_codex":0.000011170819,"about_ca_system_score_gemma":0.000011568438,"threshold_uncertainty_score":0.9708635},"labels":[],"label_agreement":null},{"id":"W2077607229","doi":"10.1186/1471-2229-12-145","title":"Histone acetyltransferases in rice (Oryza sativaL.): phylogenetic analysis, subcellular localization and expression","year":2012,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Plant Molecular Biology Research","field":"Agricultural and Biological Sciences","cited_by":148,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Agriculture and Agri-Food Canada","funders":"China Scholarship Council; Chinese Academy of Sciences; National Science Council; Agriculture and Agri-Food Canada; National Natural Science Foundation of China","keywords":"Biology; Subcellular localization; Arabidopsis; Histone Acetyltransferases; Genetics; Phylogenetic tree; Acetyltransferases; Histone; Nuclear localization sequence; Conserved sequence; Peptide sequence; Cell biology; Gene; Acetylation","score_opus":0.028895209313944493,"score_gpt":0.26315531606801273,"score_spread":0.23426010675406825,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2077607229","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9954379,0.0032887217,0.00069944153,0.00007561786,0.000048606726,0.00018055418,0.00017004456,0.000026194337,0.000072924944],"genre_scores_gemma":[0.99744445,0.00041560506,0.00012078936,0.000096974865,0.000073581774,0.000019692881,0.0017973331,9.60657e-7,0.000030637366],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99837846,0.000537014,0.00021606713,0.00032430806,0.00008669599,0.0004574351],"domain_scores_gemma":[0.9993873,0.000358337,0.000050851006,0.000063494044,0.000018825818,0.00012117631],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00040828224,0.0001488345,0.00027601348,0.00007699095,0.0000984743,0.000010248654,0.00016165184,0.00022937355,0.00008897365],"category_scores_gemma":[0.00007294987,0.00006191202,0.000057189736,0.00048281928,0.00013157909,0.00004590138,0.0000705515,0.000120316996,0.00001410522],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000041650128,0.00004345741,0.43564257,0.000004414791,0.0000137502,0.0000023147047,0.000026049847,0.0000050760145,0.5637932,0.00004577374,0.000022451071,0.00035929517],"study_design_scores_gemma":[0.0002498201,0.0001732869,0.8446258,0.000012490679,0.000055284625,0.00003817765,0.00007125037,0.00028769928,0.15047784,0.000072569645,0.003683755,0.00025206394],"about_ca_topic_score_codex":0.00029794688,"about_ca_topic_score_gemma":0.0013813223,"teacher_disagreement_score":0.41331536,"about_ca_system_score_codex":0.000022810138,"about_ca_system_score_gemma":0.000008007464,"threshold_uncertainty_score":0.2524699},"labels":[],"label_agreement":null},{"id":"W2079053455","doi":"10.1186/1471-2229-10-252","title":"Integration of deep transcriptome and proteome analyses reveals the components of alkaloid metabolism in opium poppy cell cultures","year":2010,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Berberine and alkaloids research","field":"Medicine","cited_by":122,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Plant Biotechnology Institute; University of Calgary","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Sanguinarine; Papaver; Biology; Opium Poppy; Proteome; Elicitor; Expressed sequence tag; Transcriptome; Thebaine; Secondary metabolism; Poppy; cDNA library; Complementary DNA; Biochemistry; Alkaloid; Botany; Biosynthesis; Gene expression; Gene; Codeine","score_opus":0.05995045960992028,"score_gpt":0.3548268095723443,"score_spread":0.294876349962424,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2079053455","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9978936,0.00077774195,0.00010643707,0.00024493737,0.00006247983,0.00043405977,0.000080350605,0.000005850056,0.00039457803],"genre_scores_gemma":[0.99813884,0.00018820706,0.0012385854,0.00005321108,0.00005338192,0.000023091467,0.0001632005,0.000005285663,0.0001362012],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9991291,0.00015189816,0.0003039078,0.00015470728,0.000098304634,0.00016208053],"domain_scores_gemma":[0.9995129,0.0001191291,0.00008921089,0.0001658961,0.000066278546,0.000046591904],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00035405156,0.00009888188,0.00037926662,0.0001940919,0.000021017651,0.0000036753888,0.00011211576,0.00012233808,0.00003828519],"category_scores_gemma":[0.00010205044,0.000051822302,0.00005598777,0.00020831691,0.00019380973,0.000029522907,0.000027970738,0.00027917,0.0000015633146],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002302934,0.000094622126,0.022671714,0.00010134584,0.000022604205,0.0000020523223,0.00030297952,4.964831e-7,0.97570014,0.00044885086,0.000049469196,0.0003754175],"study_design_scores_gemma":[0.0012155806,0.00019785967,0.37709865,0.000038804374,0.000052168827,0.00004963207,0.00020483068,0.00018789996,0.6191259,0.00033562368,0.0014176025,0.000075440454],"about_ca_topic_score_codex":0.00065699447,"about_ca_topic_score_gemma":0.0009846924,"teacher_disagreement_score":0.35657427,"about_ca_system_score_codex":0.0000036598196,"about_ca_system_score_gemma":0.0000253336,"threshold_uncertainty_score":0.21132521},"labels":[],"label_agreement":null},{"id":"W2080292345","doi":"10.1186/1471-2229-12-99","title":"Role of adventitious roots in water relations of tamarack (Larix laricina) seedlings exposed to flooding","year":2012,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Plant responses to water stress","field":"Agricultural and Biological Sciences","cited_by":80,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"Directorate for Biological Sciences; University of Alberta; Université Catholique de Louvain","keywords":"Xylem; Apoplast; Biology; Shoot; Botany; Photosynthesis; Endodermis; Root system; Water flow; Water transport; Stomatal conductance; Aerenchyma; Hydraulic conductivity; Horticulture; Soil water; Cell wall; Ecology; Environmental science; Soil science","score_opus":0.01991244871277833,"score_gpt":0.21851418381501636,"score_spread":0.19860173510223803,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2080292345","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9988912,0.00012512055,0.000005247203,0.0001252484,0.00008454572,0.00016791788,0.00026484736,0.000017935716,0.00031798816],"genre_scores_gemma":[0.9991521,0.0000073381157,0.00019454828,0.000027222846,0.00004987317,0.000010661067,0.00041038712,8.022127e-7,0.00014705407],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99896175,0.00014629248,0.00029119442,0.00016502994,0.000071498594,0.00036424672],"domain_scores_gemma":[0.99955046,0.00021646723,0.00008198688,0.000053531043,0.000027665079,0.00006985873],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002895586,0.00010525498,0.00024243059,0.000056672096,0.000038278875,0.0000049292066,0.00018809506,0.0001456601,0.00010248197],"category_scores_gemma":[0.00006183037,0.000039919418,0.00005499549,0.00015673309,0.000034388762,0.00007973534,0.00010125203,0.00008232946,0.00004754409],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009592161,0.00006245596,0.3105129,0.000004754681,0.0000047549124,8.186355e-7,0.00018388228,0.000013849516,0.6883948,0.00016616519,0.000024768064,0.0005349788],"study_design_scores_gemma":[0.00015268536,0.0001805813,0.70118505,0.00003270358,0.000008741607,0.000020837198,0.00012755759,0.000037858714,0.2939954,0.00015369515,0.003985388,0.00011953018],"about_ca_topic_score_codex":0.0005208974,"about_ca_topic_score_gemma":0.0035076377,"teacher_disagreement_score":0.39439934,"about_ca_system_score_codex":0.00001529986,"about_ca_system_score_gemma":0.0000056896442,"threshold_uncertainty_score":0.19573441},"labels":[],"label_agreement":null},{"id":"W2081819799","doi":"10.1186/1471-2229-8-93","title":"Small RNA regulation of ovule development in the cotton plant, G. hirsutum L","year":2008,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Plant Molecular Biology Research","field":"Agricultural and Biological Sciences","cited_by":44,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Institute of Genetics; Agricultural Research Service; U.S. Department of Agriculture","keywords":"Biology; MiRBase; Ovule; Small RNA; RNA; microRNA; Genetics; Botany; Gene; Embryo","score_opus":0.08557845774622881,"score_gpt":0.23917059277207237,"score_spread":0.15359213502584357,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2081819799","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9983402,0.00015240718,0.000009176979,0.00022399717,0.000058271118,0.00022239082,0.00022063033,0.00001714341,0.0007557651],"genre_scores_gemma":[0.99763876,0.00008474901,0.00022148217,0.000117535325,0.0000548762,0.00002133816,0.0017683922,5.771665e-7,0.0000923117],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9987014,0.0003654375,0.0002683361,0.0002444403,0.000104017796,0.00031636856],"domain_scores_gemma":[0.99926645,0.00051161356,0.00009342336,0.00006686659,0.000026703556,0.00003495221],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00050723355,0.000113986505,0.00019495892,0.000032129585,0.00012010344,0.0000044527237,0.00039663518,0.00018305512,0.000049933533],"category_scores_gemma":[0.00007970114,0.000037614063,0.00004176245,0.00020484308,0.0001490468,0.000017323438,0.000073691466,0.0001418307,0.000025931997],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001338377,0.00007656673,0.15532652,0.000005569853,0.000008848285,0.000020831994,0.0001540097,0.0000021046603,0.84084874,0.0006023444,0.00070956914,0.0021110652],"study_design_scores_gemma":[0.00020813468,0.00021765691,0.9216055,0.000015361069,0.0000025890618,0.00029347208,0.00009881836,0.00006018388,0.06036682,0.00016481787,0.016824972,0.00014165175],"about_ca_topic_score_codex":0.00029154285,"about_ca_topic_score_gemma":0.005020632,"teacher_disagreement_score":0.78048193,"about_ca_system_score_codex":0.000016628133,"about_ca_system_score_gemma":0.000037929087,"threshold_uncertainty_score":0.28016305},"labels":[],"label_agreement":null},{"id":"W2083535381","doi":"10.1186/1471-2229-11-12","title":"Identification of drought-response genes and a study of their expression during sucrose accumulation and water deficit in sugarcane culms","year":2011,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Sugarcane Cultivation and Processing","field":"Agricultural and Biological Sciences","cited_by":118,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ministry of Agriculture","funders":"Australian Agency for International Development","keywords":"Sucrose; Biology; Proline; Sugar; Gene; Plant stem; Gene expression; Botany; Cultivar; Biochemistry; Amino acid","score_opus":0.09151278203238358,"score_gpt":0.2748891732003213,"score_spread":0.18337639116793772,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2083535381","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99965745,0.00011620039,0.0000026063183,0.000012937051,0.000019763524,0.00015613402,0.000022375983,0.000008400255,0.0000041515323],"genre_scores_gemma":[0.9998862,0.000025047377,0.000021104717,0.0000035312912,0.00001023699,0.000008271224,0.000035549772,5.3367427e-7,0.000009481374],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9992597,0.00018889958,0.0002519776,0.00016738885,0.0000367217,0.000095292125],"domain_scores_gemma":[0.99966824,0.0001467698,0.00010528542,0.000031228625,0.000029354229,0.00001910656],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00030463847,0.00006829089,0.00013084391,0.000031654974,0.000054960572,0.0000066611715,0.000057370868,0.00006306946,0.000024345232],"category_scores_gemma":[0.0000360074,0.000024141,0.000010735808,0.00007301886,0.000046012457,0.00006445829,0.000047484893,0.000030484325,3.534382e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00040461123,0.00005537191,0.38256946,0.000009646559,0.0000014296189,2.6977975e-7,0.0016736543,0.0000010752044,0.61426795,0.0000048361317,1.0757507e-7,0.0010116057],"study_design_scores_gemma":[0.00019472661,0.00010270933,0.59443516,0.000011443841,0.0000018158113,0.0000039339125,0.0016389661,0.00004609169,0.4034652,0.00005719616,0.000004812211,0.00003793958],"about_ca_topic_score_codex":0.0002987378,"about_ca_topic_score_gemma":0.0007810971,"teacher_disagreement_score":0.21186568,"about_ca_system_score_codex":0.000003848788,"about_ca_system_score_gemma":0.0000029170271,"threshold_uncertainty_score":0.09844414},"labels":[],"label_agreement":null},{"id":"W2084568927","doi":"10.1186/s12870-014-0313-4","title":"In vivo functional analysis of a nuclear restorer PPR protein","year":2014,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Photosynthetic Processes and Mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":16,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"Natural Sciences and Engineering Research Council of Canada; Fonds Québécois de la Recherche sur la Nature et les Technologies","keywords":"Biology; Pentatricopeptide repeat; Genetics; Cytoplasmic male sterility; Gene; Pollen; Nuclear gene; Gene family; Computational biology; Gene expression; Genome; Botany","score_opus":0.011321220416554728,"score_gpt":0.22177167524103866,"score_spread":0.21045045482448393,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2084568927","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99588627,0.000035541012,0.0025638836,0.000040694144,0.000076960976,0.000095073905,0.000091584436,0.000005688731,0.0012043123],"genre_scores_gemma":[0.99882597,0.000015499665,0.00049565657,0.00024053734,0.000060409428,0.00001737378,0.00013420584,0.000007516253,0.00020281479],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99928874,0.00006739965,0.00017666427,0.00025754055,0.000046661098,0.00016297831],"domain_scores_gemma":[0.9996357,0.00001658696,0.000081217564,0.00019854924,0.00003134006,0.000036603135],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00019257136,0.000091091286,0.0002028306,0.00012874175,0.000019261332,0.0000028463226,0.00012084237,0.00015981813,0.00013960448],"category_scores_gemma":[0.00010726021,0.000076995304,0.0000855457,0.00015448107,0.000049110346,0.0000016926052,0.00005845316,0.00004525241,0.000004782004],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00018157251,0.00004748226,0.00091140653,0.000011652583,0.00007827405,4.9671667e-7,0.000010342234,0.000040752577,0.98853636,0.009984889,0.00014572467,0.000051028514],"study_design_scores_gemma":[0.0004242678,0.00034355198,0.0011960134,0.000009464538,0.00007914174,0.000009935493,0.000021183321,0.0009855476,0.90184546,0.0010684382,0.0938604,0.00015660118],"about_ca_topic_score_codex":0.000079383935,"about_ca_topic_score_gemma":0.00039130673,"teacher_disagreement_score":0.09371468,"about_ca_system_score_codex":0.000005642236,"about_ca_system_score_gemma":0.000037961563,"threshold_uncertainty_score":0.31397772},"labels":[],"label_agreement":null},{"id":"W2085841323","doi":"10.1186/s12870-014-0238-y","title":"Characterization of proanthocyanidin metabolism in pea (Pisum sativum) seeds","year":2014,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Plant Gene Expression Analysis","field":"Biochemistry, Genetics and Molecular Biology","cited_by":37,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta; University of Calgary","funders":"Natural Sciences and Engineering Research Council of Canada; Alberta Innovates; Alberta Innovates Bio Solutions; Rural Development Administration","keywords":"Biology; Sativum; Proanthocyanidin; Pisum; Arabidopsis; Botany; Fabaceae; Biochemistry; Polyphenol; Gene; Mutant; Antioxidant","score_opus":0.011707847337505644,"score_gpt":0.23559378235657427,"score_spread":0.22388593501906862,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2085841323","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99460745,0.000056886118,0.0042259586,0.000041781197,0.00014210305,0.00012724394,0.00023943435,0.000010142068,0.0005490099],"genre_scores_gemma":[0.9958048,0.00012726174,0.00066811836,0.0001114004,0.00020285652,0.000019135463,0.002799177,0.000011391149,0.0002558724],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9987656,0.0003040569,0.0003212968,0.0003266888,0.00006425504,0.00021812716],"domain_scores_gemma":[0.9994353,0.000029474377,0.00018516665,0.00026391406,0.00003766437,0.00004849305],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00034077885,0.00014513005,0.00029983214,0.00014828896,0.000023258666,0.0000051891143,0.00020000724,0.00022162661,0.00002460767],"category_scores_gemma":[0.00015024935,0.000121852725,0.00007321588,0.00013081917,0.000058329228,0.00000326457,0.00009614409,0.00006783196,0.000011369741],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011126701,0.000043777865,0.028468713,0.000012479123,0.00002346798,5.040789e-7,0.00002170691,0.00000807434,0.9703603,0.000366528,0.00029899104,0.0002841974],"study_design_scores_gemma":[0.00050225464,0.0000821859,0.030766629,0.000013914205,0.000019447829,0.0000142655845,0.000011286797,0.00049955305,0.92292655,0.000053296164,0.044941634,0.00016897054],"about_ca_topic_score_codex":0.000047146194,"about_ca_topic_score_gemma":0.00020657727,"teacher_disagreement_score":0.04743373,"about_ca_system_score_codex":0.0000058693,"about_ca_system_score_gemma":0.000048781054,"threshold_uncertainty_score":0.496901},"labels":[],"label_agreement":null},{"id":"W2088678592","doi":"10.1186/1471-2229-11-4","title":"Genetic dissection of maize phenology using an intraspecific introgression library","year":2011,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Genetic Mapping and Diversity in Plants and Animals","field":"Biochemistry, Genetics and Molecular Biology","cited_by":69,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"Università di Bologna","keywords":"Introgression; Biology; Backcrossing; Quantitative trait locus; Habit; Genetics; Gene","score_opus":0.05326554947508775,"score_gpt":0.23763795525345918,"score_spread":0.18437240577837144,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2088678592","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9953671,0.0003755676,0.00276196,0.000004754567,0.0002699521,0.00008327003,0.00014555317,0.000019285288,0.0009725261],"genre_scores_gemma":[0.9873248,0.00024298698,0.011768935,0.000041942632,0.0002095103,0.0000021348906,0.00033223786,0.000009968037,0.00006752994],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9991135,0.00011667989,0.00020611212,0.00030747085,0.00003671585,0.00021952072],"domain_scores_gemma":[0.99956363,0.000010615947,0.000117082585,0.0002146177,0.00002138977,0.00007267828],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00006320307,0.00013064597,0.00017248387,0.00007319194,0.00006631039,0.0000061497767,0.0001991566,0.00023579945,0.00022167752],"category_scores_gemma":[0.000014873867,0.00011070733,0.00005160389,0.000051384457,0.00013046587,0.0000048672264,0.0001127224,0.00005819743,0.000006550001],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00035473407,0.00016225828,0.16932541,0.000022583865,0.000035499987,0.000006464516,0.00012151513,0.000013789847,0.8276333,0.00044344796,0.00031407594,0.0015669178],"study_design_scores_gemma":[0.0018213012,0.004286742,0.31801182,0.00007472525,0.0001251536,0.0008004962,0.0013196944,0.000959744,0.6553732,0.0024816806,0.013813223,0.00093221985],"about_ca_topic_score_codex":0.000052769377,"about_ca_topic_score_gemma":0.000023180133,"teacher_disagreement_score":0.17226009,"about_ca_system_score_codex":0.0000025571615,"about_ca_system_score_gemma":0.000045894787,"threshold_uncertainty_score":0.4514514},"labels":[],"label_agreement":null},{"id":"W2088953409","doi":"10.1186/1471-2229-8-108","title":"RACK1 genes regulate plant development with unequal genetic redundancy in Arabidopsis","year":2008,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Protein Kinase Regulation and GTPase Signaling","field":"Biochemistry, Genetics and Molecular Biology","cited_by":89,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"Biology; Complementation; Arabidopsis; Mutant; Gene; Genetics; Null allele; Function (biology); Mutation; Allele","score_opus":0.023263314120809307,"score_gpt":0.2274172572896989,"score_spread":0.20415394316888957,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2088953409","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9924979,0.002230736,0.004716121,0.000026177793,0.0000764464,0.0002470223,0.000059356826,0.00002234824,0.00012388249],"genre_scores_gemma":[0.9854892,0.0002791081,0.012677547,0.00011190032,0.00011401467,0.00005687703,0.0009869724,0.00002135602,0.00026302994],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9985981,0.00012195095,0.00034143432,0.00046948064,0.00009341593,0.00037560484],"domain_scores_gemma":[0.9994803,0.000022154585,0.0001168324,0.00025538364,0.000036478945,0.00008883892],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014804133,0.00021978359,0.00023996047,0.00011150045,0.00011503861,0.000007082899,0.00015635148,0.00021965883,0.00002757673],"category_scores_gemma":[0.000028817383,0.00017810582,0.0000444663,0.000113135146,0.00013019337,0.0000030056322,0.000072201336,0.00008440674,0.000017988092],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0013920588,0.00018713546,0.14433217,0.00006903707,0.0001068262,0.00024874342,0.00021971244,0.002598668,0.84470457,0.00064288435,0.00050663913,0.004991562],"study_design_scores_gemma":[0.0034089421,0.00066366285,0.13305569,0.00012693398,0.000021945818,0.0014676563,0.00005238673,0.0007204166,0.8054161,0.00025169825,0.053749733,0.0010648064],"about_ca_topic_score_codex":0.00003629471,"about_ca_topic_score_gemma":0.0004466456,"teacher_disagreement_score":0.053243093,"about_ca_system_score_codex":0.000023849878,"about_ca_system_score_gemma":0.0002870424,"threshold_uncertainty_score":0.72629446},"labels":[],"label_agreement":null},{"id":"W2091344286","doi":"10.1186/1471-2229-10-226","title":"Functional Annotation, Genome Organization and Phylogeny of the Grapevine (Vitis vinifera) Terpene Synthase Gene Family Based on Genome Assembly, FLcDNA Cloning, and Enzyme Assays","year":2010,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Plant biochemistry and biosynthesis","field":"Biochemistry, Genetics and Molecular Biology","cited_by":451,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia; Canada's Michael Smith Genome Sciences Centre","funders":"Natural Sciences and Engineering Research Council of Canada; Genome British Columbia; Genome Canada","keywords":"Biology; Gene family; Pseudogene; Gene; Genome; Genetics; Gene cluster; Sequence assembly; Phylogenetic tree; Gene expression","score_opus":0.00862097186775641,"score_gpt":0.1960438908198638,"score_spread":0.1874229189521074,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2091344286","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99668753,0.00029592367,0.0008120051,0.00010911527,0.00018048703,0.00017607608,0.0016158527,0.000014249994,0.00010874087],"genre_scores_gemma":[0.9955695,0.00015694795,0.00060608226,0.00039424482,0.00025829807,0.000011111794,0.0029112021,0.00001770611,0.00007489943],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99879044,0.000112663925,0.000271044,0.0004832839,0.00011036467,0.00023221495],"domain_scores_gemma":[0.9991793,0.00010739007,0.00019191437,0.0003189479,0.00011680609,0.00008564406],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00027175652,0.00023245433,0.00022101216,0.000060480554,0.00016564675,0.00002048825,0.00018809717,0.00038990044,0.0000319523],"category_scores_gemma":[0.0002976523,0.00017489734,0.000054581484,0.0001241333,0.00022074398,0.0000050170343,0.000110816254,0.00015520393,0.0000025807062],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014741642,0.0000701256,0.015301417,0.000030308545,0.000038561142,0.000002575207,0.000006329682,0.000021683923,0.9840734,0.00006915807,0.00012450438,0.00011449648],"study_design_scores_gemma":[0.00042132707,0.00017005723,0.21636319,0.0000087041735,0.000034027413,0.00015141313,0.000007209553,0.00012121233,0.7805387,0.00001207544,0.0019797962,0.00019230177],"about_ca_topic_score_codex":0.000013409608,"about_ca_topic_score_gemma":0.000041684227,"teacher_disagreement_score":0.20353474,"about_ca_system_score_codex":0.0000072469147,"about_ca_system_score_gemma":0.000117905096,"threshold_uncertainty_score":0.71321064},"labels":[],"label_agreement":null},{"id":"W2092489939","doi":"10.1186/1471-2229-11-115","title":"Induction of stromule formation by extracellular sucrose and glucose in epidermal leaf tissue of Arabidopsis thaliana","year":2011,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Photosynthetic Processes and Mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":44,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"","keywords":"Plastid; Biology; Apoplast; Cell biology; Arabidopsis thaliana; Extracellular; Arabidopsis; Chloroplast; Epidermis (zoology); Plant cell; Cytosol; Amyloplast; Vacuole; Biochemistry; Botany; Cell wall; Cytoplasm; Anatomy; Mutant","score_opus":0.024104540258371738,"score_gpt":0.2362694726765658,"score_spread":0.21216493241819406,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2092489939","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99356663,0.0012057358,0.004731394,0.0000073993115,0.00005698225,0.00012252975,0.00018420632,0.0000031528039,0.0001219446],"genre_scores_gemma":[0.9984214,0.00043779294,0.00077778,0.000011562622,0.000014624111,0.000009647229,0.00028188978,0.0000057349566,0.000039593662],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9993551,0.000052987827,0.0002449745,0.00017202437,0.000031976106,0.0001429824],"domain_scores_gemma":[0.9996536,0.000010483786,0.00014931313,0.0001284119,0.000026322994,0.000031881522],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00017057742,0.00008978336,0.00016739608,0.00004724419,0.000014253649,0.0000014193284,0.00008281577,0.00017476232,0.000016242295],"category_scores_gemma":[0.000043182565,0.00008052678,0.000023119586,0.000040492996,0.00007169596,0.000006746762,0.00004273262,0.000043121017,8.2200035e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013114617,0.00007062907,0.0015207492,0.000058643724,0.000008003378,7.6939915e-7,0.000100173056,7.944944e-7,0.9962438,0.0003657472,0.000026896054,0.0014726745],"study_design_scores_gemma":[0.00036138226,0.0003851223,0.0006561407,0.0000147668825,0.000009422092,0.000045170073,0.0001311607,0.000044778513,0.99687815,0.00037937,0.001010564,0.000083971434],"about_ca_topic_score_codex":0.00022100286,"about_ca_topic_score_gemma":0.00014732803,"teacher_disagreement_score":0.0048547196,"about_ca_system_score_codex":0.0000038893986,"about_ca_system_score_gemma":0.000024905241,"threshold_uncertainty_score":0.32837868},"labels":[],"label_agreement":null},{"id":"W2092775357","doi":"10.1186/s12870-015-0493-6","title":"Identification of conserved drought-adaptive genes using a cross-species meta-analysis approach","year":2015,"lang":"en","type":"review","venue":"BMC Plant Biology","topic":"Plant Stress Responses and Tolerance","field":"Agricultural and Biological Sciences","cited_by":117,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"Hebrew University of Jerusalem; University of Haifa; United States-Israel Binational Science Foundation","keywords":"Biology; Brachypodium distachyon; Gene; Brachypodium; Arabidopsis; Drought tolerance; Genetics; Computational biology; Genome; Botany; Mutant","score_opus":0.445080697036024,"score_gpt":0.372359110214395,"score_spread":0.07272158682162899,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2092775357","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0036361655,0.9782095,0.00013257716,0.0000037664863,0.0000802472,0.00044465443,0.017360494,0.000028137836,0.00010445058],"genre_scores_gemma":[0.0018793248,0.99132085,0.0003541841,0.000009697494,0.00014331684,0.00008849534,0.005514851,0.0000024258068,0.000686851],"study_design_codex":"meta_analysis","study_design_gemma":"not_applicable","domain_scores_codex":[0.9969907,0.0008594694,0.0009859821,0.0006640837,0.00018482047,0.00031496806],"domain_scores_gemma":[0.9976548,0.0007298305,0.0011999797,0.00016840338,0.0001616767,0.000085310974],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000605349,0.00040994777,0.0034029342,0.00009034539,0.00012216177,0.000056971945,0.00056708365,0.00047424703,0.00014182192],"category_scores_gemma":[0.00005870766,0.00013570335,0.0019520661,0.0008021471,0.00024253366,0.000057551013,0.00012418836,0.00015096524,0.000013064878],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0022901716,0.0022462257,0.008158967,0.014580001,0.53802866,0.00011475043,0.0002388903,0.0011274293,0.033139624,0.01113224,0.0011817904,0.38776124],"study_design_scores_gemma":[0.00011314085,0.000124877,0.00071159174,0.00009448153,0.12323743,0.00013070797,0.000045251767,0.0008625607,0.00010071598,0.00008884258,0.87372506,0.0007653367],"about_ca_topic_score_codex":0.0003983545,"about_ca_topic_score_gemma":0.00040912547,"teacher_disagreement_score":0.8725433,"about_ca_system_score_codex":0.00003376211,"about_ca_system_score_gemma":0.000077341225,"threshold_uncertainty_score":0.5533822},"labels":[],"label_agreement":null},{"id":"W2095082015","doi":"10.1186/s12870-014-0355-7","title":"Potential functions of microRNAs in starch metabolism and development revealed by miRNA transcriptome profiling of cassava cultivars and their wild progenitor","year":2015,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Plant Molecular Biology Research","field":"Agricultural and Biological Sciences","cited_by":59,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ministry of Agriculture","funders":"Earmarked Fund for China Agriculture Research System; National Institute of General Medical Sciences; National Natural Science Foundation of China","keywords":"Biology; Transcriptome; microRNA; Gene; Small RNA; Deep sequencing; Gene expression; Gene expression profiling; Computational biology; Genetics; RNA-Seq; Genome","score_opus":0.043871349570852085,"score_gpt":0.2506730894144283,"score_spread":0.2068017398435762,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2095082015","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9964016,0.002042987,0.000030995994,0.00010252565,0.00005798185,0.00033782123,0.001001823,0.000009397725,0.000014856583],"genre_scores_gemma":[0.9983155,0.00009511242,0.00089424296,0.000014342917,0.000023773788,0.000022903536,0.0006066047,0.0000010306485,0.000026461279],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99878263,0.0002862828,0.00029829942,0.0002826266,0.00007369878,0.0002764702],"domain_scores_gemma":[0.9995907,0.0001223065,0.00008637173,0.000037683938,0.00006479862,0.00009817357],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00048161487,0.00013212157,0.00031680203,0.000044381326,0.00004678611,0.0000058654846,0.00013853649,0.00017437957,0.000005646202],"category_scores_gemma":[0.000056045,0.000052994437,0.000028149549,0.00013565944,0.00021574648,0.000029215063,0.00007689663,0.00012902981,0.0000011048979],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002988017,0.00005887932,0.13651514,0.000015412385,0.000026514605,0.000002516144,0.00015171486,2.1113037e-7,0.8613554,0.0000146782395,0.000046603032,0.001514094],"study_design_scores_gemma":[0.0015748952,0.0008153262,0.2898197,0.000047581736,0.000020979962,0.00028292162,0.001580225,0.00004989335,0.6959291,0.000128707,0.009390187,0.00036045414],"about_ca_topic_score_codex":0.00032549817,"about_ca_topic_score_gemma":0.0006464348,"teacher_disagreement_score":0.1654263,"about_ca_system_score_codex":0.000011554025,"about_ca_system_score_gemma":0.000056988596,"threshold_uncertainty_score":0.21610504},"labels":[],"label_agreement":null},{"id":"W2095092867","doi":"10.1186/1471-2229-7-20","title":"pax1-1 partially suppresses gain-of-function mutations in Arabidopsis AXR3/IAA17","year":2007,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Plant Molecular Biology Research","field":"Agricultural and Biological Sciences","cited_by":15,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"Biotechnology and Biological Sciences Research Council; Directorate for Biological Sciences","keywords":"Biology; Arabidopsis; Auxin; Mutant; Genetics; Repressor; Gene; Transcription factor; Phenotype; Transcription (linguistics); Mutation; Cell biology","score_opus":0.04204285959922003,"score_gpt":0.2760452547261549,"score_spread":0.23400239512693485,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2095092867","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9979031,0.00018067796,0.00023604173,0.00018740058,0.0001512055,0.00020313957,0.00033339675,0.000035588557,0.0007694191],"genre_scores_gemma":[0.99819934,0.00004827767,0.0001708218,0.00009827581,0.000100577156,0.000015756728,0.0012987141,8.8461263e-7,0.000067347464],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9985524,0.00023489073,0.00033654965,0.000316845,0.000096517295,0.00046280408],"domain_scores_gemma":[0.99864286,0.0010626266,0.00009789381,0.00006747621,0.00005235321,0.00007680631],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007150754,0.00012777536,0.0002291134,0.00006194304,0.00007556103,0.0000090696585,0.00025062746,0.00025083084,0.00014997066],"category_scores_gemma":[0.0002766803,0.000054044085,0.000068648726,0.000337189,0.00016922234,0.000038885017,0.00007219698,0.00016064005,0.00005081284],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002159365,0.00007400326,0.29298484,0.00000515575,0.00001166078,0.000016005504,0.000017513688,0.000011014844,0.7018158,0.00081654696,0.00014936744,0.0038821772],"study_design_scores_gemma":[0.00035514025,0.0008162884,0.8964507,0.00002197961,0.000015106906,0.00007001145,0.00017946074,0.00009683724,0.09039721,0.0015278728,0.009818619,0.00025080194],"about_ca_topic_score_codex":0.00043348465,"about_ca_topic_score_gemma":0.015724929,"teacher_disagreement_score":0.61141855,"about_ca_system_score_codex":0.000016786991,"about_ca_system_score_gemma":0.000025929066,"threshold_uncertainty_score":0.87748796},"labels":[],"label_agreement":null},{"id":"W2095257585","doi":"10.1186/1471-2229-11-52","title":"Association mapping of common bacterial blight resistance QTL in Ontario bean breeding populations","year":2011,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Plant pathogens and resistance mechanisms","field":"Agricultural and Biological Sciences","cited_by":87,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of Guelph; Agriculture and Agri-Food Canada","funders":"Agriculture and Agri-Food Canada","keywords":"Biology; Phaseolus; Single-nucleotide polymorphism; Association mapping; Quantitative trait locus; Population; Xanthomonas; Genetics; Genome-wide association study; Breeding program; Cultivar; Genotype; Horticulture; Gene","score_opus":0.08141910109412036,"score_gpt":0.21445436637140441,"score_spread":0.13303526527728404,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2095257585","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9968871,0.000032942848,0.000015432324,0.000049848546,0.00035680892,0.00011438251,0.0004042138,0.000019769897,0.0021195398],"genre_scores_gemma":[0.99763906,0.000009568186,0.0009772968,0.000019369136,0.00007439815,0.0000064803853,0.00060059206,5.9554e-7,0.00067265966],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99910825,0.000097821234,0.00029904718,0.00019134789,0.0000691866,0.00023433242],"domain_scores_gemma":[0.9995966,0.00008407116,0.00022513315,0.000037300568,0.000023524188,0.000033360076],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003063915,0.00009456316,0.00022499186,0.00002955233,0.00007969751,0.000007766518,0.00014636692,0.00017257658,0.0002504095],"category_scores_gemma":[0.000028553015,0.000041689553,0.000052328167,0.00013335989,0.000016983482,0.000047752354,0.000034040295,0.00009706242,0.0000053167455],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000061816165,0.00004031741,0.45225695,0.0000030210015,0.000003992397,0.0000026508446,0.00011830331,1.6649118e-7,0.5451443,0.0021746643,0.000105489715,0.00008831201],"study_design_scores_gemma":[0.00014922046,0.00008386734,0.9848355,0.00004424846,0.000007625792,0.0000037565305,0.000093037364,0.000005742623,0.0064208806,0.0016341199,0.0065921335,0.00012985272],"about_ca_topic_score_codex":0.01206998,"about_ca_topic_score_gemma":0.9086017,"teacher_disagreement_score":0.8965317,"about_ca_system_score_codex":0.000090212656,"about_ca_system_score_gemma":0.000013716496,"threshold_uncertainty_score":0.99450874},"labels":[],"label_agreement":null},{"id":"W2096215155","doi":"10.1186/1471-2229-13-192","title":"Multiple roles of the transcription factor AtMYBR1/AtMYB44 in ABA signaling, stress responses, and leaf senescence","year":2013,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Plant Gene Expression Analysis","field":"Biochemistry, Genetics and Molecular Biology","cited_by":233,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Plant Biotechnology Institute","funders":"Agriculture and Agri-Food Canada; Genome Prairie; Genome Canada","keywords":"Biology; Senescence; Transcription factor; Cell biology; Mutant; Abiotic stress; Arabidopsis; MYB; Wild type; Gene; Phenotype; Abscisic acid; Genetics","score_opus":0.016237611789766276,"score_gpt":0.2331585544531548,"score_spread":0.21692094266338854,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2096215155","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9981721,0.0005360366,0.00034226777,0.00007562665,0.000071220275,0.0001933795,0.00057419925,0.0000066028842,0.000028565582],"genre_scores_gemma":[0.99879205,0.00026935726,0.00032133135,0.0000794401,0.000037726128,0.000020395486,0.00024057794,0.000007978584,0.00023113607],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9988437,0.00030426876,0.00025845662,0.0003190099,0.00006755507,0.00020697816],"domain_scores_gemma":[0.9994548,0.00008319793,0.00011895996,0.00025783107,0.000036177098,0.00004906511],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00011895888,0.00014410872,0.00019974865,0.000060591577,0.000043212745,0.000009493892,0.000220132,0.00021075935,0.000030953455],"category_scores_gemma":[0.00014827814,0.00009748141,0.00007528733,0.00007635916,0.00012039958,0.0000048246948,0.00008113031,0.00008782849,0.0000038345624],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011666779,0.000027506607,0.26421112,0.000011744587,0.000015167272,5.2666013e-7,0.000050005205,0.000025521855,0.7349797,0.000007007838,0.0002795031,0.00027552963],"study_design_scores_gemma":[0.00048663514,0.00007495656,0.10688243,0.000037496236,0.000011322186,0.00001690112,0.00013864315,0.00047385256,0.88967526,0.000019801615,0.0020419916,0.00014069323],"about_ca_topic_score_codex":0.00027685735,"about_ca_topic_score_gemma":0.0023027177,"teacher_disagreement_score":0.1573287,"about_ca_system_score_codex":0.0000069965427,"about_ca_system_score_gemma":0.000049725222,"threshold_uncertainty_score":0.39751765},"labels":[],"label_agreement":null},{"id":"W2098804722","doi":"10.1186/1471-2229-10-3","title":"Deep sequencing identifies novel and conserved microRNAs in peanuts (Arachis hypogaeaL.)","year":2010,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Plant Molecular Biology Research","field":"Agricultural and Biological Sciences","cited_by":272,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ministry of Agriculture","funders":"National Natural Science Foundation of China; North Carolina Biotechnology Center","keywords":"Biology; Deep sequencing; microRNA; Small RNA; Genetics; DNA sequencing; Gene; Cloning (programming); Conserved sequence; Computational biology; Arachis; Illumina dye sequencing; Arabidopsis; Genome; Botany; Peptide sequence","score_opus":0.04009040677553993,"score_gpt":0.24819275620196576,"score_spread":0.20810234942642583,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2098804722","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9984452,0.00021932385,0.000012764085,0.00036519775,0.00019190558,0.00018886,0.0002585063,0.00003959961,0.00027864543],"genre_scores_gemma":[0.9984949,0.00006245588,0.00048272827,0.00022877305,0.000094732284,0.00001515989,0.0005219773,0.000001043642,0.00009818118],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99862784,0.00016857161,0.00023660215,0.00043651034,0.00006545692,0.00046504574],"domain_scores_gemma":[0.99906486,0.00065670203,0.000073277064,0.00007235028,0.00003131672,0.0001014931],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005140711,0.00016045771,0.00024375952,0.000044299704,0.00012579205,0.00003693897,0.00030518012,0.0003062435,0.00008593998],"category_scores_gemma":[0.0002753482,0.000067848916,0.0000453252,0.00014862085,0.00029063562,0.000047275546,0.00017987749,0.00038714163,0.000035614266],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00004688721,0.00002033284,0.18321782,0.0000047024023,0.000006209895,0.000023929264,0.000023772382,2.618124e-7,0.8155423,0.00032984113,0.000045046498,0.0007389073],"study_design_scores_gemma":[0.0006857802,0.00024318455,0.8702332,0.000024337127,0.000010329433,0.001254426,0.00022434857,0.0005313633,0.11969015,0.0008907263,0.005744156,0.0004680415],"about_ca_topic_score_codex":0.0013694867,"about_ca_topic_score_gemma":0.06505096,"teacher_disagreement_score":0.69585216,"about_ca_system_score_codex":0.00001543955,"about_ca_system_score_gemma":0.0000273281,"threshold_uncertainty_score":0.95200944},"labels":[],"label_agreement":null},{"id":"W2099601864","doi":"10.1186/1471-2229-10-90","title":"Identification of a new 130 bp cis-acting element in the TsVP1 promoter involved in the salt stress response from Thellungiella halophila","year":2010,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"ATP Synthase and ATPases Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":72,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba","funders":"","keywords":"Promoter; Arabidopsis; Biology; GUS reporter system; Mutant; Transgene; Gene; Reporter gene; Abiotic stress; Arabidopsis thaliana; Genetically modified crops; Genetics; Gene expression; Molecular biology; Botany","score_opus":0.03515687789496431,"score_gpt":0.31538447424928556,"score_spread":0.28022759635432126,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2099601864","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99783087,0.00019694911,0.00034886168,0.00090151466,0.00008368986,0.00039355762,0.00018963376,0.0000032792043,0.00005166385],"genre_scores_gemma":[0.99893516,0.00008236955,0.00012319181,0.00016951376,0.00017668544,0.00004152312,0.0004125627,0.000008392253,0.000050603245],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9983116,0.0006685202,0.0003446938,0.00030390537,0.00011652393,0.0002547516],"domain_scores_gemma":[0.99896115,0.00035425546,0.00013078627,0.00049908017,0.000026021069,0.000028695322],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0013611692,0.00012077836,0.00013881897,0.00006401333,0.00005123201,0.00002316623,0.0005526065,0.00019176981,0.000020738114],"category_scores_gemma":[0.0003454348,0.00007107063,0.00005533356,0.00011348801,0.00009213308,0.0000037556704,0.0000976667,0.00025593114,0.0000062415043],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0008111072,0.00009857156,0.024427285,0.000008834414,0.000013472063,0.00000892332,0.000597189,0.0000058848373,0.9725591,0.000088283436,0.00023819464,0.0011431746],"study_design_scores_gemma":[0.000899855,0.0003180742,0.047861196,0.000030509163,0.000012613196,0.000008494818,0.0018499995,0.000292015,0.9400318,0.0006422842,0.007868428,0.00018472518],"about_ca_topic_score_codex":0.0006465909,"about_ca_topic_score_gemma":0.0055511324,"teacher_disagreement_score":0.032527275,"about_ca_system_score_codex":0.000008080515,"about_ca_system_score_gemma":0.00014378966,"threshold_uncertainty_score":0.30976623},"labels":[],"label_agreement":null},{"id":"W2105386442","doi":"10.1186/1471-2229-4-20","title":"Molecular characterization and functional expression of flavonol 6-hydroxylase","year":2004,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Plant Gene Expression Analysis","field":"Biochemistry, Genetics and Molecular Biology","cited_by":39,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Concordia University; McGill University","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Biology; Biochemistry; Monooxygenase; Hydroxylation; Enzyme; Cytochrome P450; Genetics","score_opus":0.009668432350486625,"score_gpt":0.2179354377689743,"score_spread":0.2082670054184877,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2105386442","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9586937,0.00011830798,0.040625863,0.00003708079,0.000079495745,0.0000799722,0.00025628635,0.000010227207,0.00009909488],"genre_scores_gemma":[0.9950862,0.00013506768,0.00084877276,0.00012843448,0.00006770118,0.000010969819,0.0036154175,0.000009086556,0.000098365854],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99924445,0.00006500016,0.00019378362,0.00029460207,0.00006147539,0.0001406642],"domain_scores_gemma":[0.9995872,0.000011167617,0.000119301934,0.00018637395,0.00003376062,0.00006221091],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000084178115,0.000119312106,0.00015551863,0.00007611303,0.0000384323,0.000004998801,0.00007882781,0.00017925627,0.000019699788],"category_scores_gemma":[0.00005485011,0.00010203317,0.00005511026,0.00005475694,0.00006841342,0.0000034196794,0.00009515928,0.00004653231,0.0000059025633],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013871625,0.000038185583,0.0028007983,0.000010714239,0.00001978378,0.0000023422303,0.000008777959,0.00013864186,0.9963552,0.00022131315,0.00015172682,0.00011380101],"study_design_scores_gemma":[0.0005705061,0.00010425187,0.002601608,0.000017385351,0.000015583544,0.000043278833,0.0000087681465,0.000052196352,0.9927728,0.00008003775,0.0036150697,0.00011846881],"about_ca_topic_score_codex":0.000008462787,"about_ca_topic_score_gemma":0.000010602284,"teacher_disagreement_score":0.03977709,"about_ca_system_score_codex":0.000005873917,"about_ca_system_score_gemma":0.0000555206,"threshold_uncertainty_score":0.4160792},"labels":[],"label_agreement":null},{"id":"W2106164278","doi":"10.1186/1471-2229-13-170","title":"High-level expression of sugar inducible gene2 (HSI2) is a negative regulator of drought stress tolerance in Arabidopsis","year":2013,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Plant nutrient uptake and metabolism","field":"Agricultural and Biological Sciences","cited_by":39,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Plant Biotechnology Institute; National Research Council Canada; Saskatchewan Research Council (Canada)","funders":"","keywords":"Biology; Mutant; Arabidopsis; Abscisic acid; Abiotic stress; Wild type; Cell biology; Drought tolerance; Gene expression; Osmolyte; Arabidopsis thaliana; Wilting; Regulator; Gene; Botany; Genetics","score_opus":0.036618712631667785,"score_gpt":0.2233012370547287,"score_spread":0.18668252442306094,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2106164278","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9967575,0.00055641046,0.0000056343843,0.00012189369,0.00016575969,0.00027101164,0.0019974122,0.000013163896,0.0001112163],"genre_scores_gemma":[0.997972,0.00045377293,0.00088929874,0.00008532231,0.000109880355,0.000031530893,0.0002494412,9.87618e-7,0.00020777063],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9987433,0.00012949543,0.0004034844,0.0003274663,0.000109134366,0.0002871423],"domain_scores_gemma":[0.9992384,0.0002771946,0.00025563585,0.00009422177,0.00007043757,0.00006414748],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013128381,0.00015371894,0.00043950518,0.00003950771,0.000036595855,0.0000062697077,0.00027642853,0.00022021052,0.0003005126],"category_scores_gemma":[0.000055478456,0.0000609447,0.00007172808,0.00027789496,0.00009656859,0.000101422054,0.000076889504,0.00009766929,0.000017490087],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008706736,0.00012784543,0.06488947,0.000013208772,0.000006710765,9.555673e-7,0.0001471232,0.000005951038,0.9294159,0.00057636213,0.0009893196,0.0037401181],"study_design_scores_gemma":[0.00030963367,0.00010474113,0.3515153,0.00007809391,0.000005127061,0.0000030849735,0.00013697776,0.0000255633,0.6442065,0.0008191092,0.0026752509,0.00012059561],"about_ca_topic_score_codex":0.0022460213,"about_ca_topic_score_gemma":0.0007449759,"teacher_disagreement_score":0.28662583,"about_ca_system_score_codex":0.00000826042,"about_ca_system_score_gemma":0.000016024183,"threshold_uncertainty_score":0.33953273},"labels":[],"label_agreement":null},{"id":"W2106250466","doi":"10.1186/1471-2229-12-169","title":"Arabidopsis mutant sk156 reveals complex regulation of SPL15 in a miR156-controlled gene network","year":2012,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Plant Molecular Biology Research","field":"Agricultural and Biological Sciences","cited_by":75,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan; Plant Biotechnology Institute; Agriculture and Agri-Food Canada","funders":"RIKEN; Genome Canada; University of Pennsylvania","keywords":"Arabidopsis; Biology; Mutant; Gene; Genetics; Gene family; Regulation of gene expression; Wild type; Gene expression; Phenotype; Cell biology","score_opus":0.05497155223678138,"score_gpt":0.2673926602382706,"score_spread":0.2124211080014892,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2106250466","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99777716,0.0005119989,0.00001833666,0.00024216447,0.00011460636,0.0004886062,0.000388193,0.000025409934,0.00043351465],"genre_scores_gemma":[0.9966964,0.00006960304,0.00048046402,0.00018317188,0.00027904197,0.000040540068,0.0021828078,0.0000012066804,0.000066775865],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9976941,0.0007442323,0.00046921975,0.00028457618,0.00011169293,0.0006961925],"domain_scores_gemma":[0.9985483,0.0010110065,0.00019994863,0.0000906939,0.000041544194,0.00010845849],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0011774407,0.00016869295,0.00055255357,0.000052018026,0.000069808426,0.000006849535,0.00028004154,0.00028566917,0.0002585105],"category_scores_gemma":[0.00024623342,0.000066620654,0.00011889215,0.00039624333,0.00012917358,0.000040514027,0.000106503525,0.00013933892,0.00005297502],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00046128462,0.00006729443,0.31534427,0.0000040899545,0.000018644034,0.000002266453,0.000010513527,0.000010213205,0.6827198,0.0007256285,0.00028931472,0.00034663122],"study_design_scores_gemma":[0.0010637805,0.00025013965,0.9848003,0.000022242064,0.0000135125965,0.00009480378,0.000020539312,0.000396261,0.007421689,0.0006499874,0.005063074,0.00020369964],"about_ca_topic_score_codex":0.00023522825,"about_ca_topic_score_gemma":0.0010322101,"teacher_disagreement_score":0.67529815,"about_ca_system_score_codex":0.000026509035,"about_ca_system_score_gemma":0.000012880024,"threshold_uncertainty_score":0.28305086},"labels":[],"label_agreement":null},{"id":"W2107242283","doi":"10.1186/s12870-014-0202-x","title":"High levels of gene flow and genetic diversity in Irish populations of Salix capreaL. inferred from chloroplast and nuclear SSR markers","year":2014,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Genetic diversity and population structure","field":"Biochemistry, Genetics and Molecular Biology","cited_by":67,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Trinity College","funders":"Trinity College Dublin; Teagasc","keywords":"Biology; Gene flow; Genetic diversity; Population; Microsatellite; Genetic structure; Outbreeding depression; Nuclear gene; Gene pool; Genetic variation; Evolutionary biology; Ecology; Inbreeding; Genetics; Gene; Allele; Genome","score_opus":0.026063843354104606,"score_gpt":0.22215704340633952,"score_spread":0.1960932000522349,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2107242283","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99746066,0.00014713986,0.0007044211,0.000017141341,0.00011016834,0.00008568547,0.0014190039,0.0000034648633,0.00005229506],"genre_scores_gemma":[0.990182,0.00007786937,0.00914016,0.000039459363,0.00003592047,5.3735414e-7,0.00050764537,0.0000049949494,0.000011417686],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9993143,0.00009877865,0.00018586298,0.00023597405,0.00004723392,0.00011786902],"domain_scores_gemma":[0.99963486,0.00002839236,0.00010815023,0.00015012949,0.000029364723,0.000049097605],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000065216635,0.000102528495,0.00020603492,0.00005831113,0.0000541346,0.0000037771576,0.00009620954,0.00020445179,0.000030956697],"category_scores_gemma":[0.000049312133,0.00010242846,0.000028139902,0.00003995003,0.00013379833,0.000002890695,0.00022269053,0.000045918674,6.422281e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001896201,0.000016183243,0.8502639,0.00002142112,0.000033435128,7.2540973e-7,0.00014741892,0.00044765574,0.14771867,0.00011972436,0.00017810795,0.0008631633],"study_design_scores_gemma":[0.0008006689,0.00013556647,0.9934097,0.000008065798,0.000027900782,0.000009129059,0.000054364402,0.00039720951,0.0043057846,0.00036133523,0.00037976613,0.00011050091],"about_ca_topic_score_codex":0.0013689129,"about_ca_topic_score_gemma":0.001070222,"teacher_disagreement_score":0.14341289,"about_ca_system_score_codex":0.000003986888,"about_ca_system_score_gemma":0.000015745409,"threshold_uncertainty_score":0.4176911},"labels":[],"label_agreement":null},{"id":"W2107657548","doi":"10.1186/s12870-015-0628-9","title":"Association mapping of North American spring wheat breeding germplasm reveals loci conferring resistance to Ug99 and other African stem rust races","year":2015,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Wheat and Barley Genetics and Pathology","field":"Agricultural and Biological Sciences","cited_by":74,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"Agriculture and Agri-Food Canada; South Dakota State University; Ethiopian Institute of Agricultural Research; National Institute of Food and Agriculture; Department for International Development; University of Alberta; Agricultural Research Service; Montana State University; U.S. Department of Agriculture; Washington State University; University of Minnesota; Bill and Melinda Gates Foundation","keywords":"Stem rust; Germplasm; Biology; Breeding program; Common wheat; Agronomy; Plant breeding; Puccinia; Plant disease resistance; Resistance (ecology); Veterinary medicine; Biotechnology; Genetics; Horticulture; Cultivar; Gene; Mildew","score_opus":0.057330155743786464,"score_gpt":0.233958380675495,"score_spread":0.17662822493170852,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2107657548","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99819756,0.00018681698,0.000023650116,0.00043025654,0.00009945006,0.00013055374,0.00018629922,0.000023455033,0.0007219844],"genre_scores_gemma":[0.9986944,0.00003532243,0.00059877493,0.0001702695,0.00017593811,0.000007667868,0.000015877873,0.0000013367468,0.0003003737],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9989988,0.00010914364,0.00024398084,0.0002671851,0.00008518593,0.00029567644],"domain_scores_gemma":[0.99939287,0.00018803669,0.0001958743,0.000043659387,0.000060693263,0.00011888208],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00040668747,0.00011919221,0.00030325263,0.000029006862,0.000080649515,0.000020905994,0.00013258259,0.00006975946,0.000006168061],"category_scores_gemma":[0.000050896026,0.000056125424,0.00003294682,0.00020493452,0.00006481845,0.000023123022,0.000063404565,0.000071004884,0.000005183798],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000518814,0.000010207458,0.8555744,0.000008810613,0.0000101486185,0.0000017001366,0.00017407893,0.0000035935475,0.13969721,0.00017078692,0.00025838154,0.0040387693],"study_design_scores_gemma":[0.00016521515,0.0003781507,0.94531375,0.000028582057,0.000012228654,0.000010470193,0.00073168485,0.000018083287,0.0019096674,0.0000624641,0.051147502,0.00022223081],"about_ca_topic_score_codex":0.0005433174,"about_ca_topic_score_gemma":0.018648654,"teacher_disagreement_score":0.13778754,"about_ca_system_score_codex":0.000030930103,"about_ca_system_score_gemma":0.000009503302,"threshold_uncertainty_score":0.99925846},"labels":[],"label_agreement":null},{"id":"W2110973655","doi":"10.1186/1471-2229-9-106","title":"Targeted isolation, sequence assembly and characterization of two white spruce (Picea glauca) BAC clones for terpenoid synthase and cytochrome P450 genes involved in conifer defence reveal insights into a conifer genome","year":2009,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Plant biochemistry and biosynthesis","field":"Biochemistry, Genetics and Molecular Biology","cited_by":62,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canada's Michael Smith Genome Sciences Centre; University of British Columbia","funders":"Natural Sciences and Engineering Research Council of Canada; University of British Columbia; Genome British Columbia; Canada's Michael Smith Genome Sciences Centre; Genome Canada","keywords":"Biology; Gymnosperm; Genetics; genomic DNA; Gene; Genome; Shotgun sequencing; In silico; Intron; DNA sequencing; Expressed sequence tag; Sequence analysis; Botany","score_opus":0.016246482170802587,"score_gpt":0.2481812629002646,"score_spread":0.231934780729462,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2110973655","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9961952,0.0011060492,0.001420455,0.000115529605,0.000035017732,0.00042100303,0.0006822611,0.000012954234,0.000011548259],"genre_scores_gemma":[0.99400777,0.00062362524,0.0019353195,0.00021736335,0.000109383844,0.000030990566,0.0030256717,0.000010508308,0.000039388953],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9985652,0.00011521852,0.00041840042,0.00056391314,0.00005870146,0.00027858868],"domain_scores_gemma":[0.99930423,0.00007498687,0.0002264659,0.00020664954,0.00009609183,0.00009158702],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00020742729,0.00025598955,0.00036584097,0.00008816197,0.0000819418,0.000021240347,0.00015807286,0.00032782415,0.0000035363153],"category_scores_gemma":[0.00010438155,0.00022746729,0.000044934965,0.000095922565,0.0001706041,0.000019626666,0.00006468785,0.000072390765,7.214521e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00056795403,0.000053557884,0.02606744,0.00010072253,0.000025961259,0.000004752772,0.000072586336,0.0000023785387,0.9727782,0.00008178053,0.0000057214256,0.0002389601],"study_design_scores_gemma":[0.00087454397,0.00043000455,0.11246123,0.000054742715,0.000032252912,0.00007095346,0.00002784151,0.00031944172,0.88474125,0.0001586587,0.00050528697,0.00032381373],"about_ca_topic_score_codex":0.00002961576,"about_ca_topic_score_gemma":0.00019087565,"teacher_disagreement_score":0.088036954,"about_ca_system_score_codex":0.0000153986,"about_ca_system_score_gemma":0.000099656376,"threshold_uncertainty_score":0.9275847},"labels":[],"label_agreement":null},{"id":"W2111144029","doi":"10.1186/1471-2229-5-4","title":"Imaging plant cell death: GFP-Nit1 aggregation marks an early step of wound and herbicide induced cell death","year":2005,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Plant-Microbe Interactions and Immunity","field":"Agricultural and Biological Sciences","cited_by":50,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"U.S. Department of Energy","keywords":"Biology; Programmed cell death; Green fluorescent protein; Cell biology; Live cell imaging; Cell; Apoptosis; Genetics; Gene","score_opus":0.030859728599999095,"score_gpt":0.23507951021859408,"score_spread":0.204219781618595,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2111144029","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99783725,0.00020992002,0.000017412829,0.00007030177,0.00011162885,0.00017569469,0.00062500744,0.000035055167,0.00091773306],"genre_scores_gemma":[0.99803996,0.000089062625,0.0006404704,0.00012095882,0.00013079256,0.0000072922458,0.0008023189,0.0000015853045,0.000167539],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99885947,0.00019055286,0.00029769624,0.00029128822,0.000061025723,0.00029995976],"domain_scores_gemma":[0.9992936,0.000297512,0.0001936313,0.000083213774,0.00004356663,0.00008847441],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00020177155,0.00017640379,0.00023050199,0.000037779315,0.00017286604,0.0000458883,0.00020868264,0.00015290822,0.00011394218],"category_scores_gemma":[0.000017239196,0.0000797273,0.000044872064,0.00008092382,0.00004475519,0.00020366903,0.000074890944,0.00021087506,0.000020159338],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000107021835,0.0001173768,0.12112162,0.000008471402,0.000005682861,0.0000033310662,0.00005428143,0.0000012121059,0.86825514,0.00004654529,0.00010580498,0.010173496],"study_design_scores_gemma":[0.00064931664,0.0009329089,0.708707,0.000066199165,0.000041793155,0.0002770582,0.00062718673,0.0013630632,0.27357736,0.0001028728,0.013139881,0.000515378],"about_ca_topic_score_codex":0.0056792386,"about_ca_topic_score_gemma":0.0048798095,"teacher_disagreement_score":0.5946778,"about_ca_system_score_codex":0.000026462236,"about_ca_system_score_gemma":0.000015055657,"threshold_uncertainty_score":0.8585348},"labels":[],"label_agreement":null},{"id":"W2111621171","doi":"10.1186/1471-2229-9-126","title":"Seed storage protein gene promoters contain conserved DNA motifs in Brassicaceae, Fabaceae and Poaceae","year":2009,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Plant Molecular Biology Research","field":"Agricultural and Biological Sciences","cited_by":72,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"Natural Sciences and Engineering Research Council of Canada; Centre Sève; Fonds Québécois de la Recherche sur la Nature et les Technologies","keywords":"Promoter; Biology; Fabaceae; Arabidopsis; Gene; Genetics; Conserved sequence; Gene family; Genome; Botany; Gene expression; Peptide sequence","score_opus":0.024025249316481295,"score_gpt":0.23238891978815268,"score_spread":0.2083636704716714,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2111621171","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99610376,0.00031788496,0.000014083631,0.0020290825,0.00004064874,0.000876302,0.00040293508,0.00007469123,0.00014057937],"genre_scores_gemma":[0.9982903,0.00003498727,0.00021550896,0.00039463412,0.00006120791,0.000034097273,0.0007601957,0.0000014590905,0.0002075938],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99767345,0.0006428576,0.00030206967,0.00061585964,0.00010157786,0.0006641604],"domain_scores_gemma":[0.99933964,0.00026561378,0.00009994779,0.000095785406,0.00003208202,0.00016693311],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00059398706,0.00025049946,0.00040076152,0.000053110103,0.00011620272,0.000037454916,0.0003354852,0.00037161633,0.000037921534],"category_scores_gemma":[0.00018399859,0.00010779669,0.00006051102,0.00024811388,0.00020969885,0.000054840417,0.000108544766,0.00028927843,0.000026034428],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00023528094,0.00008831509,0.10756999,0.0000048870356,0.000010558343,0.00008258782,0.000022085862,6.473715e-7,0.8902799,0.00025216615,0.000053312073,0.001400294],"study_design_scores_gemma":[0.0009064974,0.0013611733,0.94486517,0.00003842391,0.000006740377,0.00025451972,0.00007189424,0.0002505466,0.04972229,0.0007206606,0.0013980287,0.00040402953],"about_ca_topic_score_codex":0.0002502511,"about_ca_topic_score_gemma":0.0029834074,"teacher_disagreement_score":0.8405576,"about_ca_system_score_codex":0.000038777685,"about_ca_system_score_gemma":0.00003742019,"threshold_uncertainty_score":0.43958214},"labels":[],"label_agreement":null},{"id":"W2111851996","doi":"10.1186/1471-2229-4-3","title":"Comparison of ESTs from juvenile and adult phases of the giant unicellular green alga Acetabularia acetabulum","year":2004,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Seaweed-derived Bioactive Compounds","field":"Agricultural and Biological Sciences","cited_by":27,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"St. Paul's Hospital","funders":"University of Washington; Ohio State University; Deutsche Forschungsgemeinschaft; Belgian American Educational Foundation; National Science Foundation","keywords":"Biology; Juvenile; Acetabularia; Botany; Ecology","score_opus":0.037933742587064556,"score_gpt":0.25866140143541966,"score_spread":0.2207276588483551,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2111851996","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9972409,0.0009730148,0.000023913772,0.00058508007,0.0001436871,0.00019735376,0.00071725465,0.000020597503,0.000098212586],"genre_scores_gemma":[0.99902344,0.000045315355,0.00044535607,0.0000773948,0.00008570933,0.0000049436576,0.00029124116,0.0000010941911,0.000025502959],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99888676,0.00015356718,0.00033249418,0.00029677656,0.00010957926,0.00022079387],"domain_scores_gemma":[0.9991202,0.0003280318,0.00028679712,0.00011563001,0.00009130888,0.00005807999],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000102860424,0.00016116988,0.00041731392,0.000013384435,0.00009240193,0.000008276294,0.0004031948,0.00017322214,0.000073025956],"category_scores_gemma":[0.0000918631,0.000055600492,0.000085723594,0.00020050615,0.00037817625,0.000038621627,0.00019401904,0.0001230845,0.0000036603226],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008538079,0.00013311883,0.13373776,0.0000055346427,0.00003189109,8.786436e-7,0.000105864485,0.0000033072258,0.86273897,0.00062945683,0.000039932685,0.0024879393],"study_design_scores_gemma":[0.0006629512,0.0003829393,0.49673948,0.000044152675,0.00005168551,0.000012715375,0.00047804663,0.00008999468,0.49701598,0.001520396,0.0028184114,0.00018323927],"about_ca_topic_score_codex":0.0066733304,"about_ca_topic_score_gemma":0.007558912,"teacher_disagreement_score":0.36572295,"about_ca_system_score_codex":0.000015707923,"about_ca_system_score_gemma":0.000025360992,"threshold_uncertainty_score":0.9999413},"labels":[],"label_agreement":null},{"id":"W2112168018","doi":"10.1186/1471-2229-12-119","title":"Discovery and functional characterization of two diterpene synthases for sclareol biosynthesis in Salvia sclarea(L.) and their relevance for perfume manufacture","year":2012,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Plant biochemistry and biosynthesis","field":"Biochemistry, Genetics and Molecular Biology","cited_by":169,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canada's Michael Smith Genome Sciences Centre; University of British Columbia","funders":"Genome Canada","keywords":"Diterpene; Biology; Biosynthesis; Labdane; Geranylgeraniol; Biochemistry; Stereochemistry; Terpenoid; Enzyme; Chemistry","score_opus":0.018077677288994363,"score_gpt":0.23272349844844709,"score_spread":0.21464582115945272,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2112168018","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98777467,0.0009265163,0.004487404,0.000074536416,0.00011945485,0.00033994083,0.0062626074,0.0000067782316,0.000008090961],"genre_scores_gemma":[0.9946087,0.00045373588,0.0005901191,0.000085599866,0.0002998231,0.00008182545,0.0037965341,0.000013515193,0.00007011931],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9990668,0.00005162104,0.00022491107,0.00034209565,0.00003090257,0.00028364288],"domain_scores_gemma":[0.99930817,0.0003301282,0.00013303528,0.0001437693,0.000029146944,0.000055745524],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00022384083,0.0002011826,0.00026237583,0.000054670312,0.000061141,0.000012880279,0.000076332595,0.00024387466,0.0000041163257],"category_scores_gemma":[0.0002414312,0.00015284786,0.00006535998,0.000032203345,0.00012480878,0.000019287647,0.00005836693,0.00004482535,2.4742826e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0007656879,0.000064691754,0.036591187,0.00014602138,0.000037734342,1.2593705e-7,0.000021737014,5.6484066e-7,0.9610259,0.00008276008,0.000048707847,0.0012148807],"study_design_scores_gemma":[0.0005525475,0.00012911191,0.02961953,0.000054712917,0.000026110854,0.000048431288,0.000036159196,0.00007603158,0.9655352,0.00006644476,0.0036509314,0.00020479053],"about_ca_topic_score_codex":0.000007237596,"about_ca_topic_score_gemma":0.000035685563,"teacher_disagreement_score":0.006971656,"about_ca_system_score_codex":0.000008291602,"about_ca_system_score_gemma":0.00003227354,"threshold_uncertainty_score":0.6232955},"labels":[],"label_agreement":null},{"id":"W2115818874","doi":"10.1186/1471-2229-10-151","title":"Brassinosteroid-mediated stress tolerance in Arabidopsis shows interactions with abscisic acid, ethylene and salicylic acid pathways","year":2010,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Plant Stress Responses and Tolerance","field":"Agricultural and Biological Sciences","cited_by":449,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Western University","funders":"Natural Sciences and Engineering Research Council of Canada; Arizona Biomedical Research Commission","keywords":"Abscisic acid; Brassinosteroid; Biology; Salicylic acid; Arabidopsis; Ethylene; Jasmonic acid; Botany; Brassinolide; Biochemistry; Gene; Plant growth; Mutant","score_opus":0.022253412545408194,"score_gpt":0.22771709133882384,"score_spread":0.20546367879341565,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2115818874","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9962254,0.00029941613,0.000008396197,0.0003669184,0.00023694753,0.00018136145,0.0024275936,0.000058124217,0.00019585279],"genre_scores_gemma":[0.9986142,0.00016297477,0.00014462676,0.00025446262,0.00015315086,0.000041237905,0.0005670958,0.00000175026,0.000060506576],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9986933,0.000118448086,0.00024684967,0.0004549693,0.00008705571,0.00039940802],"domain_scores_gemma":[0.99909264,0.0005479533,0.00011664052,0.00009150834,0.000028207915,0.00012305593],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000113571135,0.0002174532,0.00030466687,0.000042024458,0.00013244808,0.00005109757,0.0002319029,0.00018689486,0.00014551586],"category_scores_gemma":[0.00006842996,0.00008583124,0.000038994884,0.00022211425,0.0001537754,0.00011923327,0.00006674246,0.0003669107,0.000023670462],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003584461,0.00006909695,0.16246958,0.000007214081,0.0000072554276,0.000024476496,0.00006139888,0.0000037799573,0.8280534,0.00008033295,0.00004641766,0.008818591],"study_design_scores_gemma":[0.00066006416,0.00034504873,0.9266105,0.000088807,0.000009012652,0.00028345914,0.00015851502,0.00051405374,0.059483483,0.000086097614,0.011345741,0.00041517426],"about_ca_topic_score_codex":0.00044658445,"about_ca_topic_score_gemma":0.09855641,"teacher_disagreement_score":0.76856995,"about_ca_system_score_codex":0.000010024135,"about_ca_system_score_gemma":0.000018846373,"threshold_uncertainty_score":0.9178926},"labels":[],"label_agreement":null},{"id":"W2117392192","doi":"10.1186/1471-2229-6-27","title":"An optimized grapevine RNA isolation procedure and statistical determination of reference genes for real-time RT-PCR during berry development","year":2006,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Molecular Biology Techniques and Applications","field":"Biochemistry, Genetics and Molecular Biology","cited_by":877,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"University of British Columbia; Genome British Columbia; Genome Canada","keywords":"Reference genes; Biology; Gene; RNA; Gene expression; Glyceraldehyde 3-phosphate dehydrogenase; RNA extraction; Real-time polymerase chain reaction; Complementary DNA; eIF4A; Molecular biology; Biochemistry; Ribosome","score_opus":0.012403139038306366,"score_gpt":0.2725967998511203,"score_spread":0.2601936608128139,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2117392192","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.7946785,0.00010415309,0.2044786,0.000014115422,0.000009338293,0.0003524314,0.00025210972,0.000020338282,0.00009037909],"genre_scores_gemma":[0.7477722,0.00013884724,0.24622534,0.000013531947,0.000046324018,0.00016456735,0.0055654617,0.000010794538,0.00006289931],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9991702,0.00005081668,0.00026343035,0.0003271703,0.000029659353,0.00015876276],"domain_scores_gemma":[0.9995874,0.0000265269,0.0001318719,0.00015010095,0.000069376314,0.000034716497],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012257251,0.00012260088,0.00016022174,0.000046434183,0.0000801874,0.0000056565545,0.000091675654,0.00022320721,0.0000054542006],"category_scores_gemma":[0.000022493696,0.00010941173,0.000022361275,0.000031371386,0.0000827615,0.0000031558695,0.00003879372,0.00003227136,5.7177425e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00017475963,0.000049368304,0.002410495,0.000042811578,0.000007941787,3.137994e-7,0.000005060224,0.0000067753695,0.99459386,0.001299351,0.00004671429,0.0013625649],"study_design_scores_gemma":[0.0008596461,0.0005027784,0.03341292,0.000015570637,0.000030452447,0.000056181034,0.000008103292,0.0021025029,0.96001524,0.0007792999,0.0019442793,0.0002730152],"about_ca_topic_score_codex":0.000025223833,"about_ca_topic_score_gemma":0.00007186632,"teacher_disagreement_score":0.046906296,"about_ca_system_score_codex":0.0000075836583,"about_ca_system_score_gemma":0.00005576807,"threshold_uncertainty_score":0.44616812},"labels":[],"label_agreement":null},{"id":"W2120445773","doi":"10.1186/1471-2229-10-83","title":"The Dunaliella salina organelle genomes: large sequences, inflated with intronic and intergenic DNA","year":2010,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Algal biology and biofuel production","field":"Energy","cited_by":111,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University","funders":"National Center for Research Resources; Office of Science; U.S. Department of Energy; Killam Trusts; National Institutes of Health; Natural Sciences and Engineering Research Council of Canada; Badan Riset dan Inovasi Nasional; Joint Genome Institute","keywords":"Biology; Plastid; Dunaliella salina; Genome; Mitochondrial DNA; Chlamydomonas reinhardtii; Intron; Organelle; Gene; Genetics; Chloroplast; Algae; Botany","score_opus":0.00849122619804261,"score_gpt":0.21180543730046786,"score_spread":0.20331421110242526,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2120445773","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9964247,0.0014073508,0.00004802351,0.00044952706,0.000699122,0.00013095976,0.00004134786,0.000080672165,0.0007183191],"genre_scores_gemma":[0.99798155,0.0006629506,0.00015749142,0.00013738172,0.00031738548,0.0000124115195,0.00027365217,0.000010635874,0.0004465716],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9988983,0.00014898402,0.00020381676,0.00033558178,0.0000374694,0.00037579145],"domain_scores_gemma":[0.99938685,0.0001663442,0.00010337036,0.00025040895,0.000039517607,0.00005353562],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00038857007,0.00016454149,0.00017046818,0.000041057727,0.00029122143,0.000017145963,0.00020032578,0.00030260425,0.00022396968],"category_scores_gemma":[0.000073201874,0.00008545345,0.00002574897,0.00010664038,0.0003998436,0.000036138354,0.000088993205,0.00036736648,0.00011099348],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.001091319,0.000060036607,0.12079001,0.000030472067,0.000253964,0.000015701096,0.00031263873,0.000007852233,0.77393174,0.09716255,0.00085402123,0.005489708],"study_design_scores_gemma":[0.0015643567,0.0010000739,0.014407149,0.000015999985,0.00008475289,0.0013936858,0.0003744856,0.00024669347,0.064575136,0.010659775,0.9050382,0.00063969765],"about_ca_topic_score_codex":0.0002038079,"about_ca_topic_score_gemma":0.013043531,"teacher_disagreement_score":0.90418416,"about_ca_system_score_codex":0.000014263228,"about_ca_system_score_gemma":0.00007516033,"threshold_uncertainty_score":0.7278597},"labels":[],"label_agreement":null},{"id":"W2121343218","doi":"10.1186/1471-2229-13-142","title":"Construction of a genetic linkage map and QTL analysis of erucic acid content and glucosinolate components in yellow mustard (Sinapis alba L.)","year":2013,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Genomics, phytochemicals, and oxidative stress","field":"Biochemistry, Genetics and Molecular Biology","cited_by":26,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Agriculture and Agri-Food Canada","funders":"","keywords":"Glucosinolate; Biology; Sinapis; Quantitative trait locus; Erucic acid; Brassica; Synteny; Brassicaceae; Genetic linkage; Genetics; Arabidopsis; Locus (genetics); Botany; Gene; Chromosome; Mutant","score_opus":0.024269779463233568,"score_gpt":0.22142959470252033,"score_spread":0.19715981523928677,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2121343218","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9970948,0.0018600369,0.00048015584,0.000022696453,0.000057089957,0.00020454403,0.00025627704,0.0000026394773,0.000021765263],"genre_scores_gemma":[0.9956355,0.00069456256,0.003147464,0.00003178678,0.00002104232,0.000011602847,0.00043755674,0.0000062137683,0.000014241641],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9990285,0.00009030295,0.00035075707,0.00031804485,0.000035902278,0.00017647422],"domain_scores_gemma":[0.9994785,0.00003004346,0.00019360942,0.00017839264,0.00006385129,0.000055593784],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00007248678,0.00013860087,0.0003928006,0.0001512864,0.000017381584,0.0000052622463,0.000089524874,0.00018465151,0.0000123898835],"category_scores_gemma":[0.00002961266,0.00012490367,0.000066035034,0.00008022663,0.000349678,0.0000030383144,0.00010126101,0.000059571288,9.990937e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000075991054,0.000025735653,0.31563872,0.000040337636,0.000165705,4.775982e-7,0.00004088361,0.000006009893,0.6836095,0.000020332538,0.000010999054,0.0003652804],"study_design_scores_gemma":[0.0007515284,0.00018938363,0.4635807,0.000019314246,0.00012659773,0.000011590729,0.0001506995,0.00041037585,0.53436565,0.00012940018,0.00012405528,0.00014067987],"about_ca_topic_score_codex":0.0003326445,"about_ca_topic_score_gemma":0.00028292235,"teacher_disagreement_score":0.14924385,"about_ca_system_score_codex":0.0000069658454,"about_ca_system_score_gemma":0.000017629642,"threshold_uncertainty_score":0.5093424},"labels":[],"label_agreement":null},{"id":"W2122028887","doi":"10.1186/s12870-015-0437-1","title":"The contrasting N management of two oilseed rape genotypes reveals the mechanisms of proteolysis associated with leaf N remobilization and the respective contributions of leaves and stems to N storage and remobilization during seed filling","year":2015,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Plant nutrient uptake and metabolism","field":"Agricultural and Biological Sciences","cited_by":94,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Institute of Genetics; Région Normandie; Université de Rennes 1; Institut National de la Recherche Agronomique; Agence Nationale de la Recherche","keywords":"Biology; Agronomy; Horticulture; Nitrate; Crop; Growing season; Fertilizer","score_opus":0.020637153633120745,"score_gpt":0.22430473759633743,"score_spread":0.2036675839632167,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2122028887","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9967947,0.0012745286,0.00061471073,0.00019976548,0.000029022693,0.00084440963,0.00020624179,0.000009416498,0.000027231566],"genre_scores_gemma":[0.9991619,0.00058496994,0.00010200304,0.000013797981,0.000017356357,0.000025730005,0.000045211393,8.7869694e-7,0.000048165894],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9989574,0.00038059906,0.0002611627,0.00016574287,0.00009879436,0.00013629976],"domain_scores_gemma":[0.99859834,0.0008331798,0.0003208036,0.000052469924,0.00016145258,0.000033737426],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0012433329,0.00008866564,0.00025163015,0.00001642772,0.00022191714,0.000015205075,0.00009052753,0.000050295643,4.866511e-7],"category_scores_gemma":[0.00034093374,0.0000256959,0.000019672521,0.00021774937,0.00020566126,0.000033890065,0.00006271707,0.000049155013,5.6330745e-8],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0014671363,0.000036028247,0.017045634,0.000025698631,0.00015882586,8.842065e-7,0.00083784,0.000117468204,0.95203906,0.027050927,0.0000059534823,0.0012145549],"study_design_scores_gemma":[0.006687772,0.0011459634,0.78784394,0.00058047276,0.0005347264,0.000050645474,0.012380568,0.0025941704,0.17395382,0.013514266,0.0003353388,0.00037830166],"about_ca_topic_score_codex":0.000096715965,"about_ca_topic_score_gemma":0.00046148273,"teacher_disagreement_score":0.77808523,"about_ca_system_score_codex":0.000009657267,"about_ca_system_score_gemma":0.000007864556,"threshold_uncertainty_score":0.17068297},"labels":[],"label_agreement":null},{"id":"W2123315944","doi":"10.1186/s12870-015-0595-1","title":"Suppression of different classes of somatic mutations in Arabidopsis by vir gene-expressing Agrobacterium strains","year":2015,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Plant tissue culture and regeneration","field":"Biochemistry, Genetics and Molecular Biology","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Department of Science and Technology, Ministry of Science and Technology, India; Department of Biotechnology, Ministry of Science and Technology, India; University of Lethbridge; Université Laval","keywords":"Biology; Arabidopsis; Agrobacterium; Somatic cell; Genetics; Gene; Computational biology; Transformation (genetics); Mutant","score_opus":0.027206808067240882,"score_gpt":0.2631223490758128,"score_spread":0.2359155410085719,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2123315944","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99740547,0.0007405163,0.0009504269,0.000032851727,0.00012364077,0.000112254,0.0005285805,0.0000047842145,0.0001014702],"genre_scores_gemma":[0.9946528,0.00008528615,0.00056486507,0.000011995602,0.000057171033,0.0000105929685,0.0045088828,0.000006165416,0.00010222985],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9992313,0.00011865125,0.000279802,0.00018273656,0.000052633866,0.00013491925],"domain_scores_gemma":[0.99959964,0.000020416981,0.00015171804,0.0001439436,0.000037175218,0.000047099773],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00007154269,0.00011127891,0.0002087904,0.000047135814,0.000018299874,0.000004189112,0.000107807326,0.00018737874,0.0000045689403],"category_scores_gemma":[0.000056176727,0.000080654136,0.000041082232,0.0000359191,0.000075760676,0.0000041605754,0.00004008881,0.000043378208,9.764789e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00004714462,0.00009702834,0.02910326,0.000030460564,0.000017479133,6.1655817e-7,0.00011248719,0.00006357847,0.9691035,0.000032065887,0.0012940577,0.000098285374],"study_design_scores_gemma":[0.0004805167,0.00017382107,0.009951857,0.000032541062,0.000015180022,0.000019823485,0.000105313164,0.00011670367,0.98797196,0.000049333274,0.0009816661,0.00010127799],"about_ca_topic_score_codex":0.00007392285,"about_ca_topic_score_gemma":0.000590441,"teacher_disagreement_score":0.019151405,"about_ca_system_score_codex":0.0000095679525,"about_ca_system_score_gemma":0.000079418554,"threshold_uncertainty_score":0.328898},"labels":[],"label_agreement":null},{"id":"W2126191743","doi":"10.1186/1471-2229-9-6","title":"Transcriptomic analysis of Arabidopsis developing stems: a close-up on cell wall genes","year":2009,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Polysaccharides and Plant Cell Walls","field":"Agricultural and Biological Sciences","cited_by":80,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"Institut National de la Recherche Agronomique; Centre National de la Recherche Scientifique","keywords":"Biology; Transcriptome; Gene; Arabidopsis; Proteome; Proteomics; Arabinogalactan; Cell wall; Arabidopsis thaliana; Biogenesis; Genetics; Genome; Cell biology; Gene expression; Mutant","score_opus":0.03580609662957527,"score_gpt":0.2312431088925958,"score_spread":0.19543701226302054,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2126191743","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9976461,0.00070899015,0.000023474317,0.00025452583,0.00013251523,0.000115053095,0.0006819048,0.00003806225,0.00039940875],"genre_scores_gemma":[0.9975143,0.0008540041,0.00014350093,0.00059358834,0.000072831994,0.000003342866,0.00063521357,6.025323e-7,0.00018258746],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9987851,0.0001138519,0.00033853902,0.00034192027,0.000090614136,0.00033000796],"domain_scores_gemma":[0.9993694,0.00032361594,0.00014304883,0.0000711724,0.00002430634,0.00006849581],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002027658,0.00017540834,0.00044483074,0.00007298215,0.0000740577,0.000014271551,0.00029141008,0.00017885635,0.00016185737],"category_scores_gemma":[0.000009488116,0.00006782718,0.00022118553,0.00047538147,0.000030982475,0.00002920408,0.00001267208,0.00008373366,0.000025987027],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014125888,0.000060206847,0.018008463,0.000007480095,0.00009855735,0.0000030095455,0.00006502873,0.000021646025,0.9616747,0.0010078197,0.00019955185,0.01871229],"study_design_scores_gemma":[0.00066288735,0.0017702149,0.5497021,0.00007447805,0.000767702,0.000022915769,0.00025652396,0.0016129724,0.3876827,0.0011261425,0.05524726,0.0010741012],"about_ca_topic_score_codex":0.0005720095,"about_ca_topic_score_gemma":0.002378803,"teacher_disagreement_score":0.57399195,"about_ca_system_score_codex":0.000018688392,"about_ca_system_score_gemma":0.000015065007,"threshold_uncertainty_score":0.2765912},"labels":[],"label_agreement":null},{"id":"W2127318293","doi":"10.1186/1471-2229-13-59","title":"The effect of ‘Candidatus Liberibacter asiaticus’ infection on the proteomic profiles and nutritional status of pre-symptomatic and symptomatic grapefruit (Citrus paradisi) plants","year":2013,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Phytoplasmas and Hemiptera pathogens","field":"Agricultural and Biological Sciences","cited_by":87,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Agricultural Research Service; University of California, Davis; Canada Millennium Scholarship Foundation; U.S. Department of Agriculture","keywords":"Biology; Citrus paradisi; Phloem; Botany; Biochemistry; Rutaceae","score_opus":0.011114249482191634,"score_gpt":0.2079046150053646,"score_spread":0.19679036552317297,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2127318293","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9980874,0.00021393137,5.678705e-7,0.00011795775,0.000054054555,0.0009970234,0.00042581192,0.000014875298,0.00008834654],"genre_scores_gemma":[0.9990567,0.00049669953,0.000021181111,0.00002306489,0.00004472335,0.00022690286,0.000117626594,0.0000010362916,0.0000120876275],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9989805,0.0002502984,0.0002526638,0.00017360445,0.00008224303,0.00026068464],"domain_scores_gemma":[0.99805975,0.001617225,0.00018517867,0.00006214328,0.000017548804,0.000058129044],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001909419,0.00014213222,0.00024428847,0.000015548623,0.00016375315,0.000031046762,0.00009170523,0.00009225811,0.000038125087],"category_scores_gemma":[0.00007802708,0.000038702106,0.000046183097,0.00006259617,0.00019154571,0.00004786557,0.000043045267,0.00008300435,0.0000052604014],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001865559,0.00003927003,0.8334847,0.00009985445,0.000041067,2.8403812e-7,0.00006293154,2.9265385e-7,0.16011252,0.0007048621,0.00014441858,0.0051232455],"study_design_scores_gemma":[0.00026540487,0.0012329249,0.96228766,0.00009734167,0.000017413353,0.000035221332,0.000017722401,0.00018341969,0.034202453,0.0013401577,0.00023064569,0.00008965253],"about_ca_topic_score_codex":0.00010536694,"about_ca_topic_score_gemma":0.00013922885,"teacher_disagreement_score":0.12880294,"about_ca_system_score_codex":0.000008430939,"about_ca_system_score_gemma":0.000007527709,"threshold_uncertainty_score":0.15782261},"labels":[],"label_agreement":null},{"id":"W2129621365","doi":"10.1186/s12870-014-0282-7","title":"Genome-wide analysis of Cyclophilin gene family in soybean (Glycine max)","year":2014,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Signaling Pathways in Disease","field":"Biochemistry, Genetics and Molecular Biology","cited_by":43,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Agriculture and Agri-Food Canada; Western University","funders":"Agriculture and Agri-Food Canada; Natural Sciences and Engineering Research Council of Canada","keywords":"Biology; Genome; Gene; Gene family; Genetics; Gene duplication; Cyclophilin; Tandem exon duplication; Intron; Functional divergence","score_opus":0.015382883858602748,"score_gpt":0.2401843261340424,"score_spread":0.22480144227543963,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2129621365","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99466646,0.00081320305,0.0033934203,0.000020570806,0.00008975482,0.000114988434,0.00041415606,0.000012432761,0.00047503362],"genre_scores_gemma":[0.9955949,0.00007927199,0.001051992,0.0003018987,0.000118975004,0.000015292684,0.0027717743,0.000014968262,0.000050933602],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9985887,0.00020481566,0.0003905412,0.0004535743,0.000068895606,0.0002934806],"domain_scores_gemma":[0.99914277,0.0000953789,0.00014416022,0.00049018493,0.000043942455,0.00008359035],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000385711,0.00017496101,0.00040036344,0.0002288613,0.000022956723,0.00000381544,0.00030661072,0.00022805955,0.000023183064],"category_scores_gemma":[0.0002850729,0.0001606234,0.00017235783,0.00030705935,0.00011168394,0.0000012570873,0.00012053961,0.00007298982,0.000009289692],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015230516,0.00005677193,0.30405617,0.000010424808,0.00016954845,0.000002824967,0.000011407946,0.00068952976,0.6946377,0.00008732549,0.000053249925,0.00007273667],"study_design_scores_gemma":[0.0012232399,0.00039218355,0.5992857,0.00001025324,0.00034515728,0.0000065043596,0.000029276624,0.0008390723,0.39101833,0.0003574446,0.006092726,0.00040009018],"about_ca_topic_score_codex":0.0000610435,"about_ca_topic_score_gemma":0.00021454801,"teacher_disagreement_score":0.30361938,"about_ca_system_score_codex":0.000012723727,"about_ca_system_score_gemma":0.00006388604,"threshold_uncertainty_score":0.6550032},"labels":[],"label_agreement":null},{"id":"W2130589003","doi":"10.1186/1471-2229-10-214","title":"Molecular analysis of phosphomannomutase (PMM) genes reveals a unique PMM duplication event in diverse Triticeae species and the main PMM isozymes in bread wheat tissues","year":2010,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Ubiquitin and proteasome pathways","field":"Biochemistry, Genetics and Molecular Biology","cited_by":20,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Institute of Genetics and Developmental Biology, Chinese Academy of Sciences; Chinese Academy of Sciences; Institute of Genetics; National Natural Science Foundation of China; Murdoch University","keywords":"Triticeae; Biology; Gene duplication; Isozyme; Gene; Brachypodium distachyon; Gene family; Brachypodium; Ploidy; Genetics; Common wheat; Aegilops; Glutenin; Genome; Concerted evolution; Tandem exon duplication; Biochemistry; Enzyme; Chromosome; Protein subunit","score_opus":0.012799231998138014,"score_gpt":0.2550393430135977,"score_spread":0.2422401110154597,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2130589003","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99532276,0.00295047,0.0003918274,0.00022055708,0.00004741292,0.0004124049,0.0004998342,0.0000061183014,0.0001486094],"genre_scores_gemma":[0.9969226,0.0013926021,0.0006078515,0.00013227413,0.00004275151,0.000071218674,0.0007370259,0.000008690005,0.00008499875],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.998654,0.00033114952,0.00035678316,0.0003653367,0.00005934595,0.00023337314],"domain_scores_gemma":[0.9993052,0.000119918164,0.0001360247,0.0003526951,0.000038269867,0.000047908576],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00064718234,0.0001669664,0.00038283484,0.00018930106,0.00003725876,0.000011457252,0.00021401595,0.00025044417,0.000028782635],"category_scores_gemma":[0.000145406,0.00012509007,0.00010583468,0.00025165378,0.00028805624,0.0000041839544,0.00013133248,0.00013567833,0.0000018521459],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00041868826,0.00006190032,0.048336748,0.000029746256,0.000105644736,0.00001056821,0.00017003802,0.000058830614,0.9449034,0.0053387866,0.000034828056,0.0005308265],"study_design_scores_gemma":[0.0021801726,0.00021363604,0.046716332,0.000030172756,0.00018585261,0.000047160192,0.00032597454,0.00049221504,0.9434362,0.0013074254,0.0047628554,0.0003020174],"about_ca_topic_score_codex":0.0006010006,"about_ca_topic_score_gemma":0.006023826,"teacher_disagreement_score":0.0054228255,"about_ca_system_score_codex":0.0000099213585,"about_ca_system_score_gemma":0.00004579115,"threshold_uncertainty_score":0.5101025},"labels":[],"label_agreement":null},{"id":"W2130869693","doi":"10.1186/1471-2229-13-181","title":"Identification and characterization of the three homeologues of a new sucrose transporter in hexaploid wheat (Triticum aestivum L.)","year":2013,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Plant nutrient uptake and metabolism","field":"Agricultural and Biological Sciences","cited_by":43,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Winnipeg; University of Manitoba","funders":"Natural Sciences and Engineering Research Council of Canada; University of Minnesota","keywords":"Biology; Amino acid; Oryza sativa; Biochemistry; Transmembrane domain; Subcellular localization; Sucrose; Yeast; Genome; Brachypodium distachyon; Gene; Botany","score_opus":0.02216290874551603,"score_gpt":0.19971082307306182,"score_spread":0.1775479143275458,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2130869693","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9985854,0.00027251203,0.000027219077,0.00039857053,0.00011750101,0.00027996633,0.0003002695,0.000008388847,0.000010198649],"genre_scores_gemma":[0.9989838,0.00044582834,0.000015362964,0.000051573403,0.00004642578,0.000011250292,0.00034819575,4.4125755e-7,0.000097138414],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.999334,0.000059121438,0.0002739483,0.0001516599,0.000049220675,0.00013207384],"domain_scores_gemma":[0.9996894,0.000073890835,0.00013217662,0.00004606566,0.000027446771,0.00003100827],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00011677937,0.000076100994,0.00018916196,0.00001879648,0.000026100188,0.000005077615,0.00013286296,0.00010137385,0.000033793927],"category_scores_gemma":[0.000020121883,0.000026267866,0.000035697198,0.00014282468,0.0000895442,0.0000830891,0.000020792537,0.000048214177,0.000003494489],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000016950951,0.000026275364,0.3109523,0.000005237117,0.0000018211447,9.9939435e-8,0.000040905536,5.6367504e-8,0.68476087,0.00028833415,0.000017722092,0.0038894573],"study_design_scores_gemma":[0.00015631625,0.00005387921,0.94693094,0.000022245727,0.000007252524,0.000006323015,0.000020718382,0.000016566553,0.050567035,0.00063649734,0.0015281858,0.000054032538],"about_ca_topic_score_codex":0.00058894773,"about_ca_topic_score_gemma":0.0018068732,"teacher_disagreement_score":0.63597864,"about_ca_system_score_codex":0.0000026275263,"about_ca_system_score_gemma":0.000008494837,"threshold_uncertainty_score":0.10711725},"labels":[],"label_agreement":null},{"id":"W2134309749","doi":"10.1186/s12870-014-0351-y","title":"Overexpression of tomato SlNAC1transcription factor alters fruit pigmentation and softening","year":2014,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Plant Gene Expression Analysis","field":"Biochemistry, Genetics and Molecular Biology","cited_by":218,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Institute of Genetics and Developmental Biology, Chinese Academy of Sciences; Chinese Academy of Sciences; Institute of Genetics; National Natural Science Foundation of China","keywords":"Ripening; Biology; Solanum; Transcription factor; Ethylene; Carotenoid; Orange (colour); Lycopene; Cell biology; Chromoplast; Botany; Gene; Biochemistry; Horticulture","score_opus":0.015067217666388903,"score_gpt":0.2518812184954267,"score_spread":0.2368140008290378,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2134309749","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9808216,0.00011367172,0.018499894,0.000019146331,0.000084482526,0.0000800905,0.00017828407,0.00001239386,0.0001904248],"genre_scores_gemma":[0.9965717,0.000094269235,0.00211574,0.0001165795,0.000066674555,0.0000074799036,0.00091834343,0.000008323436,0.000100865655],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9991451,0.00014688338,0.00021181624,0.00028191932,0.00006331,0.00015095274],"domain_scores_gemma":[0.9995835,0.00004087571,0.000133617,0.00015921872,0.000024769166,0.00005804256],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012417247,0.00011893412,0.00017307034,0.00006910263,0.00004410703,0.0000071089744,0.000095310716,0.00015818182,0.000025477526],"category_scores_gemma":[0.00007207484,0.00009858875,0.000055516422,0.00003608732,0.00005118341,0.0000046398895,0.000052893327,0.000042798292,0.0000035698606],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000118776254,0.000015005271,0.020811992,0.00002239537,0.00002433215,1.3322023e-7,0.000038124566,0.000021474629,0.9768887,0.000080073965,0.0011154269,0.0008635575],"study_design_scores_gemma":[0.0005973309,0.00019079397,0.009112868,0.00004149283,0.000021718806,0.000019338364,0.00004703563,0.0010643519,0.98205185,0.00007977374,0.0066122827,0.00016116034],"about_ca_topic_score_codex":0.000025060775,"about_ca_topic_score_gemma":0.00003034208,"teacher_disagreement_score":0.016384155,"about_ca_system_score_codex":0.000004861954,"about_ca_system_score_gemma":0.00001586718,"threshold_uncertainty_score":0.40203327},"labels":[],"label_agreement":null},{"id":"W2142350945","doi":"10.1186/s12870-015-0478-5","title":"New insights into the evolutionary history of plant sorbitol dehydrogenase","year":2015,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Plant Gene Expression Analysis","field":"Biochemistry, Genetics and Molecular Biology","cited_by":36,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"China Scholarship Council; Australian Government","keywords":"Biology; Phylogenetic tree; Gene family; Sorbitol dehydrogenase; Gene; Genetics; Botany; Genome; Biochemistry; Sorbitol","score_opus":0.023107549587034988,"score_gpt":0.23407763528180728,"score_spread":0.2109700856947723,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2142350945","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9645153,0.025260085,0.004226629,0.00022174859,0.0012943464,0.00030385226,0.0003235187,0.00003983617,0.0038146426],"genre_scores_gemma":[0.98675305,0.00056675624,0.0028659664,0.00053266506,0.00054605864,0.000023830631,0.0034486426,0.000021412457,0.005241607],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9988104,0.0002256183,0.0002901624,0.00034074695,0.00012127818,0.00021176589],"domain_scores_gemma":[0.9990989,0.00005201462,0.00017110753,0.00044306,0.00005967044,0.00017523301],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001646996,0.0001699608,0.00022847761,0.0000866003,0.000037607635,0.000002758333,0.00040109732,0.00023566103,0.00003281731],"category_scores_gemma":[0.00014864322,0.0001118646,0.00011667387,0.00006918196,0.0001404199,0.0000032381818,0.00018964255,0.00009467294,0.000039467515],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00021661035,0.00002828229,0.0019154317,0.0000047284907,0.00006180973,0.0000057482157,0.00020026806,0.00005600475,0.5931273,0.000258758,0.40402144,0.00010360284],"study_design_scores_gemma":[0.00053455785,0.000179788,0.0001667938,0.00000966488,0.00004030137,0.00010137119,0.00010144807,0.00047781764,0.12889634,0.00036084067,0.8689434,0.0001877108],"about_ca_topic_score_codex":0.00044119914,"about_ca_topic_score_gemma":0.000770111,"teacher_disagreement_score":0.46492192,"about_ca_system_score_codex":0.000070099515,"about_ca_system_score_gemma":0.00087780453,"threshold_uncertainty_score":0.4561706},"labels":[],"label_agreement":null},{"id":"W2145145853","doi":"10.1186/1471-2229-13-167","title":"iTRAQ-based protein profiling provides insights into the central metabolism changes driving grape berry development and ripening","year":2013,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Horticultural and Viticultural Research","field":"Agricultural and Biological Sciences","cited_by":66,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Genome British Columbia; Universidad de Alicante; University of Victoria; Genome Canada","keywords":"Ripening; Berry; Biology; Proteome; Metabolic pathway; Vitis vinifera; Botany; Food science; Biochemistry; Metabolism","score_opus":0.037023771449972646,"score_gpt":0.2381390512852625,"score_spread":0.20111527983528985,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2145145853","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.995979,0.00073934876,0.000004955792,0.0021076815,0.00006658496,0.0009775987,0.0000060226507,0.00006778357,0.000050983934],"genre_scores_gemma":[0.9976289,0.00003789891,0.0011914547,0.00019571593,0.0002148955,0.00037495687,0.00017343342,0.0000012891051,0.0001814145],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99839723,0.00022193919,0.00023458624,0.00038945497,0.00016481058,0.0005920031],"domain_scores_gemma":[0.99932456,0.00029231684,0.00008507448,0.000049187056,0.00008206227,0.00016682653],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00020665626,0.00021670328,0.00022795777,0.000018556953,0.00057922304,0.00014247297,0.00027346134,0.00013347594,0.00006824888],"category_scores_gemma":[0.00014172362,0.00005601717,0.00004817317,0.00018861244,0.00016757434,0.00013035348,0.00013731455,0.000196187,0.00002816399],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000016700344,0.000023115685,0.011383788,0.000019047373,0.000015260053,0.0000018308377,0.00063918426,5.8844114e-7,0.95032644,0.0005828048,0.000028867546,0.03696234],"study_design_scores_gemma":[0.00022190079,0.00022050664,0.39919072,0.00008873738,0.000015335585,0.000012575698,0.0016435235,0.00049292156,0.5689395,0.0006644483,0.028077733,0.0004320583],"about_ca_topic_score_codex":0.001170124,"about_ca_topic_score_gemma":0.0084010465,"teacher_disagreement_score":0.38780695,"about_ca_system_score_codex":0.000023033204,"about_ca_system_score_gemma":0.000029687117,"threshold_uncertainty_score":0.4687981},"labels":[],"label_agreement":null},{"id":"W2146179620","doi":"10.1186/s12870-015-0542-1","title":"Isoprene emission by poplar is not important for the feeding behaviour of poplar leaf beetles","year":2015,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Insect-Plant Interactions and Control","field":"Agricultural and Biological Sciences","cited_by":22,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université du Québec à Chicoutimi","funders":"Deutsche Forschungsgemeinschaft","keywords":"Isoprene; Biology; Salicaceae; Botany; Terpenoid; Green leaf volatiles; Volatile organic compound; Horticulture; Woody plant; Herbivore; Chemistry; Ecology","score_opus":0.04197207962580257,"score_gpt":0.25285471129299714,"score_spread":0.21088263166719456,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2146179620","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99426574,0.00063254597,0.000042661486,0.0009980279,0.00038194063,0.00024021893,0.0033150287,0.000024255558,0.000099582096],"genre_scores_gemma":[0.9981168,0.00009930956,0.000069737194,0.00035826862,0.00022449701,0.000034012708,0.0006244328,0.0000011218649,0.00047181494],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9991089,0.000045977515,0.0002932639,0.0002203571,0.00008436012,0.0002471531],"domain_scores_gemma":[0.9991584,0.00045480786,0.0001835526,0.00005951506,0.00007279812,0.0000709213],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00029989873,0.0001276761,0.00021092738,0.000012004983,0.00016572399,0.000019219611,0.00023656366,0.00015144098,0.000120969715],"category_scores_gemma":[0.000076919685,0.000039953487,0.000106772015,0.00006582983,0.000042304982,0.00004345062,0.000041717012,0.00009095224,0.0000071283102],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00033413598,0.00005670256,0.027206952,0.0000034325271,0.000020159134,0.0000010658097,0.000058139485,5.4414096e-7,0.9418041,0.00030756654,0.026959578,0.0032476212],"study_design_scores_gemma":[0.001724689,0.0030545904,0.024616668,0.00008397824,0.00020493226,0.00034621562,0.002810862,0.0021473216,0.48351032,0.0010109908,0.47970602,0.000783428],"about_ca_topic_score_codex":0.0013185221,"about_ca_topic_score_gemma":0.0005481418,"teacher_disagreement_score":0.4582938,"about_ca_system_score_codex":0.000013904867,"about_ca_system_score_gemma":0.000017508659,"threshold_uncertainty_score":0.19932199},"labels":[],"label_agreement":null},{"id":"W2147731794","doi":"10.1186/1471-2229-12-140","title":"Identification of the dehydrin gene family from grapevine species and analysis of their responsiveness to various forms of abiotic and biotic stress","year":2012,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Plant Stress Responses and Tolerance","field":"Agricultural and Biological Sciences","cited_by":202,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"National Natural Science Foundation of China","keywords":"Biology; Methyl jasmonate; Salicylic acid; Abscisic acid; Gene; Desiccation; Biotic stress; Powdery mildew; Gene family; Abiotic component; Abiotic stress; Botany; Vitis vinifera; Gene expression; Genetics","score_opus":0.02459855012360285,"score_gpt":0.2200959308664214,"score_spread":0.19549738074281856,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2147731794","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9927254,0.0011566144,0.000031622007,0.00006098973,0.000051680356,0.00012337076,0.0058409316,0.0000038449125,0.00000558849],"genre_scores_gemma":[0.99935645,0.00036012864,0.000041414463,0.000021253574,0.000018452094,0.0000022701095,0.00018561764,4.6688743e-7,0.000013925977],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9992363,0.00012780342,0.0002781373,0.00015553755,0.00006268835,0.00013953734],"domain_scores_gemma":[0.99903226,0.00059194496,0.00021445536,0.00008307675,0.00003578456,0.000042460284],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00016334973,0.000090390145,0.00031313972,0.0000454495,0.000045320186,0.0000053144795,0.00015852723,0.00007300744,0.00000793218],"category_scores_gemma":[0.00005513586,0.000029741435,0.00006505613,0.0003535375,0.00013616397,0.000030721076,0.00008737263,0.00003185248,2.7512354e-7],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015602398,0.000027845672,0.37539402,0.0000073753317,0.00006139514,9.41776e-8,0.00009416789,0.0000062900617,0.6226975,0.00014971747,0.0000011169353,0.0014044653],"study_design_scores_gemma":[0.000053678516,0.000063326,0.8048535,0.000016760325,0.00008198833,0.00000188261,0.00011489796,0.00011115423,0.1944842,0.00006339435,0.00010467565,0.000050516348],"about_ca_topic_score_codex":0.00037300444,"about_ca_topic_score_gemma":0.0013111529,"teacher_disagreement_score":0.4294595,"about_ca_system_score_codex":0.000003994596,"about_ca_system_score_gemma":0.000005070023,"threshold_uncertainty_score":0.121282056},"labels":[],"label_agreement":null},{"id":"W2147950542","doi":"10.1186/1471-2229-10-191","title":"Thaumatin-like proteins are differentially expressed and localized in phloem tissues of hybrid poplar","year":2010,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Legume Nitrogen Fixing Symbiosis","field":"Agricultural and Biological Sciences","cited_by":30,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Victoria","funders":"Canadian Forest Service; Natural Sciences and Engineering Research Council of Canada; U.S. Forest Service; University of Victoria","keywords":"Immunogold labelling; Phloem; Biology; Plastid; Antiserum; Immunofluorescence; Sieve tube element; Subcellular localization; Cell biology; Parenchyma; Plasmodesma; Botany; Cytoplasm; Ultrastructure; Biochemistry; Gene; Genetics; Antigen","score_opus":0.017999859350101812,"score_gpt":0.21715961009049964,"score_spread":0.19915975074039782,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2147950542","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99878824,0.000114346505,0.0000038359267,0.00015944825,0.0001495734,0.00028759224,0.00039439945,0.00004123561,0.00006132561],"genre_scores_gemma":[0.99911845,0.000015037008,0.00048418058,0.000051401425,0.00007278174,0.000028516679,0.00019055404,0.0000012097446,0.00003789564],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9989793,0.00012834741,0.00025882048,0.0003011719,0.00007679939,0.0002556062],"domain_scores_gemma":[0.9994661,0.0002152412,0.00015634131,0.000074401534,0.000026980253,0.000060890492],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015721176,0.00014834055,0.00032028276,0.000023461527,0.000050025847,0.000016228969,0.00022996678,0.00013151375,0.0001742752],"category_scores_gemma":[0.00008976005,0.000058048838,0.000046593035,0.00008672684,0.00013100411,0.00004114845,0.00010198096,0.00015908538,0.000009205624],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000060521743,0.00006447895,0.20282713,0.00001414855,0.000006704573,0.0000046123528,0.000027842229,2.2728397e-8,0.79583114,0.00014058402,0.000062600964,0.00096022926],"study_design_scores_gemma":[0.00060561846,0.00025916676,0.27358145,0.000054880973,0.0000127702815,0.0000486766,0.00009125559,0.000035340756,0.7219501,0.0009002137,0.002192067,0.00026842425],"about_ca_topic_score_codex":0.0007625576,"about_ca_topic_score_gemma":0.0064049186,"teacher_disagreement_score":0.07388099,"about_ca_system_score_codex":0.0000046370506,"about_ca_system_score_gemma":0.000007829741,"threshold_uncertainty_score":0.3574095},"labels":[],"label_agreement":null},{"id":"W2150470597","doi":"10.1186/s12870-015-0602-6","title":"Glyma11g13220, a homolog of the vernalization pathway gene VERNALIZATION 1 from soybean [Glycine max (L.) Merr.], promotes flowering in Arabidopsis thaliana","year":2015,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Soybean genetics and cultivation","field":"Agricultural and Biological Sciences","cited_by":30,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ministry of Agriculture","funders":"South China Agricultural University; China Agricultural Research System; China Agricultural University","keywords":"Vernalization; Arabidopsis; Biology; photoperiodism; Locus (genetics); Gene; Arabidopsis thaliana; Botany; Repressor; Flowering Locus C; Genetics; Gene expression; Mutant","score_opus":0.04065306715280969,"score_gpt":0.21785484372270514,"score_spread":0.17720177656989544,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2150470597","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99842024,0.00032649253,0.00017399839,0.00016598837,0.0002713358,0.00021119419,0.00027649966,0.000020627875,0.00013364879],"genre_scores_gemma":[0.99859554,0.00002757561,0.00021968372,0.00006856193,0.00015899686,0.000011112494,0.00086110533,0.000001577654,0.00005584417],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9989552,0.0001774263,0.0002981838,0.0002527035,0.00013418555,0.00018229554],"domain_scores_gemma":[0.9995031,0.000094657145,0.00019750411,0.000086449225,0.00006998759,0.000048339592],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00022806678,0.00012522396,0.00018737752,0.000018021376,0.000055586024,0.000013822867,0.00025304672,0.00014104023,0.000056147455],"category_scores_gemma":[0.0001610828,0.000048416303,0.000054330387,0.00029932786,0.000054945605,0.000042517153,0.00007705736,0.00006424647,0.0000060217662],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007449723,0.00006706057,0.33234125,0.000004288884,0.000012300884,0.0000016064407,0.0002323516,0.0001327857,0.66431934,0.00039898633,0.000111949674,0.0023035754],"study_design_scores_gemma":[0.000645958,0.00029303535,0.75768507,0.00006517443,0.000019125104,0.000013698239,0.0003279858,0.0025201691,0.23238003,0.0042541083,0.0015481778,0.00024748652],"about_ca_topic_score_codex":0.0020842266,"about_ca_topic_score_gemma":0.0031175683,"teacher_disagreement_score":0.4319393,"about_ca_system_score_codex":0.000036167723,"about_ca_system_score_gemma":0.000026950964,"threshold_uncertainty_score":0.31507412},"labels":[],"label_agreement":null},{"id":"W2152451071","doi":"10.1186/1471-2229-12-52","title":"The family of Deg/HtrA proteases in plants","year":2012,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Enzyme Production and Characterization","field":"Biochemistry, Genetics and Molecular Biology","cited_by":43,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"Deutsche Forschungsgemeinschaft; Joint Genome Institute; Alexander von Humboldt-Stiftung","keywords":"Proteases; Biology; Protease; Genome; Genetics; Arabidopsis thaliana; Gene; Phylogenetics; Computational biology; Enzyme; Biochemistry; Mutant","score_opus":0.023554471168852825,"score_gpt":0.2536942155738862,"score_spread":0.2301397444050334,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2152451071","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9976388,0.0014097394,0.00018583595,0.00004331351,0.0002543355,0.00012913883,0.000067283574,0.00000475874,0.00026680215],"genre_scores_gemma":[0.9986409,0.00045005808,0.00010946542,0.00008904195,0.00019596473,0.000021636319,0.00037337825,0.00000460795,0.00011493135],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9994747,0.00008205254,0.00014366859,0.000106841406,0.000026789914,0.000165972],"domain_scores_gemma":[0.999746,0.000017124214,0.00006641049,0.00013060884,0.000014559526,0.000025277299],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00017217649,0.00006142002,0.000071498864,0.000022007453,0.000030762883,0.0000026647183,0.00008535583,0.00009015208,0.000004028772],"category_scores_gemma":[0.00006405031,0.00004152447,0.000021533866,0.000031190422,0.000054280845,0.0000022637043,0.000030500874,0.000038416405,0.0000061006026],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010833102,0.000040107905,0.13074765,0.000006640982,0.000006232769,8.610858e-8,0.00002118966,0.0000010931503,0.8675366,0.00035056923,0.00043092069,0.00075058505],"study_design_scores_gemma":[0.00029006694,0.00010528552,0.19703197,0.000008133688,0.0000032619325,0.000025458057,0.00010434657,0.0000068092363,0.706271,0.000039865685,0.09601338,0.00010040187],"about_ca_topic_score_codex":0.000015728418,"about_ca_topic_score_gemma":0.00005072342,"teacher_disagreement_score":0.16126558,"about_ca_system_score_codex":0.0000033007161,"about_ca_system_score_gemma":0.00002628894,"threshold_uncertainty_score":0.16933186},"labels":[],"label_agreement":null},{"id":"W2154509322","doi":"10.1186/1471-2229-7-17","title":"Conifer R2R3-MYB transcription factors: sequence analyses and gene expression in wood-forming tissues of white spruce (Picea glauca)","year":2007,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Plant Gene Expression Analysis","field":"Biochemistry, Genetics and Molecular Biology","cited_by":148,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"Génome Québec; Genome Canada; North Carolina State University","keywords":"MYB; Biology; Gymnosperm; Gene; Gene family; Arabidopsis; Genetics; Xylem; Phylogenetic tree; Botany; Gene expression; Mutant","score_opus":0.054919838326374974,"score_gpt":0.32554340549360844,"score_spread":0.27062356716723346,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2154509322","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99147123,0.0010450077,0.006879061,0.00001669384,0.00008501755,0.00012040861,0.00025570355,0.000012231604,0.000114641996],"genre_scores_gemma":[0.99418724,0.0004813239,0.0038968043,0.000055226,0.000069569964,0.000004733158,0.0011248569,0.000011489694,0.000168746],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99856126,0.00012398128,0.00044266123,0.0004498892,0.00009911701,0.0003230648],"domain_scores_gemma":[0.99936074,0.000062312625,0.0001868724,0.00024930495,0.00004619374,0.00009458912],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003545187,0.00021156271,0.0003539651,0.00021758903,0.000066448585,0.000008004254,0.000181898,0.0003225671,0.00002620023],"category_scores_gemma":[0.000084572726,0.00016952856,0.000082981176,0.00014251233,0.0001147273,0.00001092028,0.000100499856,0.000102165635,0.000001624744],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00019456988,0.000032092597,0.13062412,0.000022255223,0.000029217967,0.0000069441603,0.00019542933,0.000025763804,0.86860573,0.0000083567365,0.00008623259,0.00016931373],"study_design_scores_gemma":[0.00044169172,0.00013039453,0.016119745,0.00004864792,0.000030902513,0.000038235325,0.00024109043,0.000069289556,0.97962683,0.000016977438,0.0030328366,0.00020336168],"about_ca_topic_score_codex":0.00013479288,"about_ca_topic_score_gemma":0.0008252911,"teacher_disagreement_score":0.114504375,"about_ca_system_score_codex":0.000014726994,"about_ca_system_score_gemma":0.000042695363,"threshold_uncertainty_score":0.6913174},"labels":[],"label_agreement":null},{"id":"W2155383501","doi":"10.1186/1471-2229-13-12","title":"Transcriptome analysis of bitter acid biosynthesis and precursor pathways in hop (Humulus lupulus)","year":2013,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Hops Chemistry and Applications","field":"Pharmacology, Toxicology and Pharmaceutics","cited_by":84,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"Genome Prairie","keywords":"Humulus lupulus; Biology; Hop (telecommunications); Transcriptome; Botany; Gene; Genetics; Gene expression; Food science","score_opus":0.10117331859437848,"score_gpt":0.3672961318852774,"score_spread":0.26612281329089893,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2155383501","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9965781,0.00042910545,0.00012444089,0.00038112284,0.000080864214,0.00020384033,0.0008047796,0.000030894927,0.0013668655],"genre_scores_gemma":[0.9984768,0.00021930251,0.00026083473,0.00047454212,0.00003706424,0.00015197325,0.00023328792,0.0000072375315,0.00013896007],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99875677,0.0002264839,0.00035396306,0.00031361854,0.000037133683,0.00031201894],"domain_scores_gemma":[0.9991297,0.00044662246,0.000105948726,0.00017402096,0.000029032917,0.000114655995],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00025542328,0.00016224329,0.00040175914,0.00023389119,0.000058432855,0.000006077321,0.00018941845,0.00038874647,0.0014453456],"category_scores_gemma":[0.000043659104,0.00013844616,0.00009894129,0.00043342516,0.0002415211,0.00004690909,0.00003612364,0.0002572329,0.000057951616],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000073636314,0.00016660315,0.10447938,0.000032679498,0.00029018117,0.0000019220292,0.00036510368,0.000020933498,0.89125794,0.00077336375,0.00038703493,0.002151237],"study_design_scores_gemma":[0.0010446612,0.00008139345,0.051172588,0.0000110528335,0.0008161156,0.000017977682,0.0002062048,0.004427368,0.9188658,0.0005477769,0.022465765,0.00034327226],"about_ca_topic_score_codex":0.00006954909,"about_ca_topic_score_gemma":0.00014635151,"teacher_disagreement_score":0.05330679,"about_ca_system_score_codex":0.000016219197,"about_ca_system_score_gemma":0.000028184739,"threshold_uncertainty_score":0.9994675},"labels":[],"label_agreement":null},{"id":"W2156224979","doi":"10.1186/1471-2229-13-103","title":"Cadmium uptake and partitioning in durum wheat during grain filling","year":2013,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Plant Stress Responses and Tolerance","field":"Agricultural and Biological Sciences","cited_by":151,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"Agriculture and Agri-Food Canada","keywords":"Shoot; Cadmium; Biology; Anthesis; Agronomy; Chromosomal translocation; Poaceae; Biomass (ecology); Horticulture; Cultivar; Chemistry; Gene","score_opus":0.0207497316895189,"score_gpt":0.20796584542115065,"score_spread":0.18721611373163174,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2156224979","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9985728,0.00034832873,0.0000020229081,0.00048037886,0.000080991034,0.000122033955,0.00016949873,0.000030912008,0.00019299578],"genre_scores_gemma":[0.99914825,0.00023341244,0.00007761843,0.00008999257,0.000092387105,0.000029314437,0.00014022434,5.230974e-7,0.00018828768],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9991813,0.00007209729,0.00017079776,0.00023190056,0.000037002384,0.00030695248],"domain_scores_gemma":[0.9996743,0.00018209316,0.000042570788,0.000027136974,0.0000096364465,0.00006422175],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000078712794,0.00009947456,0.00015073644,0.000016667447,0.00011941171,0.00003135721,0.000081005775,0.000096081385,0.00020056713],"category_scores_gemma":[0.00003766583,0.000039765775,0.000025023373,0.00008351154,0.000041101808,0.000069910915,0.0000425849,0.000089556794,0.000032903336],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007666557,0.00002211196,0.40391245,0.000011873266,0.000004166353,0.000016069354,0.000042432286,0.000011455674,0.5908845,0.00030345624,0.00013445111,0.0045803655],"study_design_scores_gemma":[0.00016334103,0.00005392488,0.9922007,0.00003800869,0.0000014258744,0.00007544352,0.00007753904,0.00040359987,0.0024689997,0.0003012079,0.0040862747,0.00012958134],"about_ca_topic_score_codex":0.0010698012,"about_ca_topic_score_gemma":0.005139517,"teacher_disagreement_score":0.5884155,"about_ca_system_score_codex":0.0000075194594,"about_ca_system_score_gemma":0.0000035268617,"threshold_uncertainty_score":0.2867971},"labels":[],"label_agreement":null},{"id":"W2157816514","doi":"10.1186/1471-2229-13-22","title":"Plant breeding can be made more efficient by having fewer, better crosses","year":2013,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Genetics and Plant Breeding","field":"Agricultural and Biological Sciences","cited_by":46,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Department for International Development; Bangor University; Agriculture and Agri-Food Canada; James Hutton Institute","keywords":"Biology; Crop; Food security; Plant breeding; Population; Breeding program; Biotechnology; Yield (engineering); Agronomy; Cultivar; Agriculture; Demography; Ecology","score_opus":0.036664506399849216,"score_gpt":0.21625103935670653,"score_spread":0.1795865329568573,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2157816514","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9933475,0.00025590815,0.000008867671,0.0029551869,0.00036747387,0.00021895216,0.0025366747,0.00006990172,0.00023953326],"genre_scores_gemma":[0.9960565,0.000057976104,0.00017231697,0.0011820669,0.00035565108,0.000026163767,0.0019010684,0.0000019127417,0.0002463623],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9985104,0.00005278234,0.00026866223,0.00042674266,0.00012925864,0.0006121346],"domain_scores_gemma":[0.99929845,0.00033844353,0.00010986798,0.000062035346,0.0000362781,0.00015491081],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00016280006,0.00022616361,0.00024920367,0.000021209846,0.00028692035,0.00012324985,0.0003375091,0.00021228941,0.00045323742],"category_scores_gemma":[0.000032245767,0.0000891735,0.00007559806,0.00011544308,0.0000958875,0.000030142763,0.00013142347,0.00016231484,0.00005458192],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000008524806,0.00002938289,0.10052063,0.0000063460493,0.000009467691,0.0000035856501,0.00006379747,0.000011016071,0.8780277,0.00006766219,0.018838221,0.002413694],"study_design_scores_gemma":[0.000878436,0.0010383608,0.61896497,0.0001673362,0.00006696814,0.00064140954,0.0018260385,0.0054885386,0.15336677,0.00043979334,0.2150448,0.002076606],"about_ca_topic_score_codex":0.0033993109,"about_ca_topic_score_gemma":0.0010389223,"teacher_disagreement_score":0.7246609,"about_ca_system_score_codex":0.000019530045,"about_ca_system_score_gemma":0.000008642663,"threshold_uncertainty_score":0.5138764},"labels":[],"label_agreement":null},{"id":"W2159557663","doi":"10.1186/1471-2229-13-144","title":"Calmodulin-dependent and calmodulin-independent glutamate decarboxylases in apple fruit","year":2013,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"GABA and Rice Research","field":"Agricultural and Biological Sciences","cited_by":67,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"Natural Sciences and Engineering Research Council of Canada; Queen's University; University of Guelph","keywords":"Biology; Calmodulin; Glutamate decarboxylase; Malus; Biochemistry; Arabidopsis; Enzyme; Abiotic component; Amino acid; Recombinant DNA; Botany; Gene","score_opus":0.027418202403307515,"score_gpt":0.24137813332215086,"score_spread":0.21395993091884336,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2159557663","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9979095,0.00036605782,0.000009811041,0.00052685407,0.00011516441,0.0004249094,0.00020771973,0.000043361702,0.00039664246],"genre_scores_gemma":[0.99872816,0.00030507677,0.00008938811,0.000108727116,0.00015068997,0.00008215022,0.00020590612,0.0000013948273,0.00032853722],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99833286,0.00018385811,0.00027115562,0.0004692689,0.00015553867,0.00058732415],"domain_scores_gemma":[0.99922603,0.00041781986,0.000058058264,0.0000719632,0.000038030725,0.00018811133],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00028886128,0.00018047272,0.00027631276,0.000038330134,0.000113681665,0.00005521858,0.00027015083,0.0002282373,0.0005205589],"category_scores_gemma":[0.00006287291,0.000065411834,0.000050242856,0.00016151078,0.00010059034,0.00007456195,0.00020107605,0.00021399236,0.00025336308],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000048056736,0.00012345772,0.22223131,0.00001619804,0.00001085652,0.000026736492,0.000048561662,0.00000426353,0.761596,0.0003501646,0.00033568149,0.015208673],"study_design_scores_gemma":[0.00046294674,0.00034540336,0.9871412,0.000020364545,0.0000059391477,0.00012997938,0.0004156023,0.0008940598,0.0060621738,0.0012742307,0.0029238823,0.0003242452],"about_ca_topic_score_codex":0.007881851,"about_ca_topic_score_gemma":0.013019706,"teacher_disagreement_score":0.76490986,"about_ca_system_score_codex":0.000030591807,"about_ca_system_score_gemma":0.000017841196,"threshold_uncertainty_score":0.99872476},"labels":[],"label_agreement":null},{"id":"W2160291893","doi":"10.1186/1471-2229-9-16","title":"Characterization and comparative analysis of HMW glutenin 1Ay alleles with differential expressions","year":2009,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Wheat and Barley Genetics and Pathology","field":"Agricultural and Biological Sciences","cited_by":60,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Key Research and Development Program of China; National High-tech Research and Development Program; Program for New Century Excellent Talents in University; Agriculture and Agri-Food Canada; Foundation for the Author of National Excellent Doctoral Dissertation of the People's Republic of China","keywords":"Biology; Glutenin; Genetics; Triticeae; Gene; Ploidy; Protein subunit; Genome","score_opus":0.03841248873679633,"score_gpt":0.23834759920868587,"score_spread":0.19993511047188955,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2160291893","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99898994,0.000056437362,0.00022078448,0.000106885425,0.000021054357,0.000063510335,0.00040101187,0.000009561977,0.00013081105],"genre_scores_gemma":[0.9977621,0.00007888153,0.00013013312,0.000043169704,0.000044857126,0.0000025867369,0.0018933538,1.2879208e-7,0.000044782886],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99950093,0.00007245516,0.00011979975,0.00016119322,0.00003204347,0.00011360149],"domain_scores_gemma":[0.9997738,0.00007134074,0.00007065839,0.00002658635,0.000021740345,0.000035854413],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000033120345,0.00007843906,0.00024633453,0.000024969419,0.00006051232,0.00000742066,0.00006345652,0.00007517278,0.000078610494],"category_scores_gemma":[0.000002460546,0.000024952089,0.000035980313,0.00015390448,0.000060848542,0.000014331316,0.000015521839,0.0000334813,6.966818e-7],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008560977,0.00004191525,0.03609815,7.2381874e-7,0.00003797973,6.0816e-7,0.00006608643,0.0000019402098,0.9603253,0.00095016975,0.000008173711,0.002383344],"study_design_scores_gemma":[0.00011280649,0.000612665,0.9738135,0.0000049789514,0.00010217329,0.0000051962575,0.000054072505,0.00021254455,0.024106132,0.000052944004,0.0008356455,0.000087365515],"about_ca_topic_score_codex":0.000023880488,"about_ca_topic_score_gemma":0.00059157994,"teacher_disagreement_score":0.93771535,"about_ca_system_score_codex":0.0000012154042,"about_ca_system_score_gemma":0.0000028084778,"threshold_uncertainty_score":0.10175166},"labels":[],"label_agreement":null},{"id":"W2160898602","doi":"10.1186/1471-2229-8-82","title":"LAMINA: a tool for rapid quantification of leaf size and shape parameters","year":2008,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Leaf Properties and Growth Measurement","field":"Agricultural and Biological Sciences","cited_by":329,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Western Forest Products; University of British Columbia; Novelis (Canada)","funders":"Bill and Melinda Gates Foundation","keywords":"Biology; Lamina; Biomass (ecology); Principal component analysis; Specific leaf area; Botany; Shape analysis (program analysis); Agronomy; Mathematics; Statistics; Ecology; Photosynthesis","score_opus":0.10468213846070434,"score_gpt":0.231908620649987,"score_spread":0.12722648218928265,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2160898602","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.998717,0.0004177314,0.000027778136,0.00035130177,0.000066517496,0.00024081851,0.00012898786,0.000014897293,0.000034958954],"genre_scores_gemma":[0.998758,0.0002385641,0.000647072,0.00011932413,0.000044123062,0.000030853498,0.000081047,4.3950263e-7,0.00008057003],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99942183,0.000051753304,0.0001614155,0.00018025636,0.00004188406,0.0001428495],"domain_scores_gemma":[0.9994702,0.00036667613,0.000070335176,0.000034386972,0.000034506833,0.000023945326],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00018515834,0.000070352966,0.00014261255,0.000005049444,0.000091288115,0.0000045069196,0.00008143914,0.00007173055,0.000039181912],"category_scores_gemma":[0.00014522242,0.000024062192,0.00004328584,0.000043797765,0.00009626737,0.00002420892,0.000019452831,0.000026443411,0.0000033855486],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00024620965,0.00005244471,0.04729909,0.000023169425,0.000012479118,4.147971e-7,0.000058101905,7.763883e-7,0.9214215,0.00046491294,0.00057202915,0.029848866],"study_design_scores_gemma":[0.000810665,0.0023591795,0.84649026,0.00003487679,0.000030276176,0.00006511843,0.00022878259,0.0005248226,0.09954883,0.00049534056,0.04903246,0.00037938388],"about_ca_topic_score_codex":0.000088348315,"about_ca_topic_score_gemma":0.000088130546,"teacher_disagreement_score":0.82187265,"about_ca_system_score_codex":0.0000051292395,"about_ca_system_score_gemma":0.0000064465157,"threshold_uncertainty_score":0.098122776},"labels":[],"label_agreement":null},{"id":"W2161257558","doi":"10.1186/1471-2229-12-15","title":"The role of the Arabidopsis FUSCA3transcription factor during inhibition of seed germination at high temperature","year":2012,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Seed Germination and Physiology","field":"Agricultural and Biological Sciences","cited_by":111,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Imbibition; Germination; Biology; Seed dormancy; Dormancy; Seedling; Fluridone; Cell biology; Arabidopsis; Arabidopsis thaliana; Abscisic acid; Botany; Mutant; Gene; Biochemistry","score_opus":0.012611762269314025,"score_gpt":0.19925819492767433,"score_spread":0.1866464326583603,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2161257558","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9987308,0.00030590835,1.2301784e-7,0.00018714582,0.00025645806,0.00013739894,0.00025483352,0.0000117999925,0.00011556379],"genre_scores_gemma":[0.9994953,0.000037755508,0.000004044639,0.00002634445,0.0001432061,0.000009549969,0.00016190461,5.604503e-7,0.000121294026],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.999298,0.00019071288,0.00018497609,0.00010094659,0.000066199165,0.00015916045],"domain_scores_gemma":[0.9994944,0.00021902405,0.00016365813,0.00005108208,0.00004730979,0.00002455147],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00011567038,0.00007797403,0.0001137915,0.000009335015,0.0001819187,0.0000038116766,0.00011038561,0.00014646235,0.000061094615],"category_scores_gemma":[0.000036005167,0.000022646052,0.00007353088,0.00011995372,0.000087147026,0.00004689498,0.000036323647,0.000069807356,0.0000054178977],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000058156795,0.00002678529,0.08706308,0.0000057161933,0.00000386415,1.6183163e-8,0.00008253362,9.180532e-7,0.9106767,0.0013966664,0.000012732801,0.0006728379],"study_design_scores_gemma":[0.000054697215,0.00002836523,0.598482,0.0000051151796,0.0000030255997,0.0000033574095,0.00008493584,0.0000038592098,0.40023443,0.00022652047,0.00084054517,0.000033151246],"about_ca_topic_score_codex":0.00007470821,"about_ca_topic_score_gemma":0.00013472077,"teacher_disagreement_score":0.51141894,"about_ca_system_score_codex":0.000017679798,"about_ca_system_score_gemma":0.0000056823674,"threshold_uncertainty_score":0.139919},"labels":[],"label_agreement":null},{"id":"W2163604010","doi":"10.1186/1471-2229-10-106","title":"Laser microdissection of conifer stem tissues: Isolation and analysis of high quality RNA, terpene synthase enzyme activity and terpenoid metabolites from resin ducts and cambial zone tissue of white spruce (Picea glauca)","year":2010,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Plant biochemistry and biosynthesis","field":"Biochemistry, Genetics and Molecular Biology","cited_by":98,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canada's Michael Smith Genome Sciences Centre; University of British Columbia","funders":"Natural Resources Canada; Natural Sciences and Engineering Research Council of Canada; University of British Columbia; Genome British Columbia; Genome Canada","keywords":"Biology; Phloem; Xylem; Methyl jasmonate; Terpenoid; Botany; ATP synthase; Terpene; Cambium; Biochemistry; Enzyme; Gene","score_opus":0.011123729384668303,"score_gpt":0.24909748620570327,"score_spread":0.23797375682103497,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2163604010","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99285173,0.0008463214,0.00045463908,0.000032420736,0.00007255417,0.00013102754,0.005594545,0.000005439109,0.000011316],"genre_scores_gemma":[0.99738616,0.0002391518,0.0011732219,0.00001051396,0.00007209004,0.000003648859,0.001017427,0.0000071011827,0.0000907048],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99872345,0.00020154227,0.00038260108,0.0004648428,0.000069766145,0.00015777178],"domain_scores_gemma":[0.99900025,0.0001768006,0.00039437608,0.0002769476,0.00007907591,0.0000725189],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00032816926,0.0001938979,0.0005878583,0.00010091628,0.000055799715,0.000008891876,0.00009337023,0.00038456565,0.000022250255],"category_scores_gemma":[0.000110406596,0.00016994818,0.000053778214,0.00011551547,0.00029750573,0.000011648333,0.00011986518,0.0000938745,1.7059718e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0008852643,0.000084241525,0.074620925,0.00009325694,0.00042031187,9.621231e-7,0.000054471548,0.0000010921077,0.92265874,0.00002024282,0.000008665705,0.0011518082],"study_design_scores_gemma":[0.00039005984,0.00013588318,0.1531402,0.000015416088,0.00047654854,0.00001517135,0.000036254143,0.000057362962,0.8453788,0.00000857759,0.00019283204,0.00015285562],"about_ca_topic_score_codex":0.0019425256,"about_ca_topic_score_gemma":0.0027141932,"teacher_disagreement_score":0.07851927,"about_ca_system_score_codex":0.0000027927042,"about_ca_system_score_gemma":0.000035329762,"threshold_uncertainty_score":0.69302857},"labels":[],"label_agreement":null},{"id":"W2163910104","doi":"10.1186/1471-2229-12-73","title":"Novel variants of HMW glutenin subunits from Aegilops section Sitopsis species in relation to evolution and wheat breeding","year":2012,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Wheat and Barley Genetics and Pathology","field":"Agricultural and Biological Sciences","cited_by":41,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Agriculture and Agri-Food Canada","funders":"National Key Research and Development Program of China; National High-tech Research and Development Program; National Natural Science Foundation of China","keywords":"Biology; Glutenin; Triticeae; Aegilops; ORFS; Genetics; Genome; Phylogenetic tree; Germplasm; Gene; Aegilops tauschii; Botany; Protein subunit; Open reading frame; Peptide sequence","score_opus":0.0470328130239151,"score_gpt":0.21779664576508476,"score_spread":0.17076383274116966,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2163910104","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99821365,0.00024496272,0.00029698992,0.00013866973,0.00043831824,0.00009664257,0.0002456969,0.000010826565,0.0003142337],"genre_scores_gemma":[0.9985632,0.000042375254,0.0005913701,0.000031711803,0.0004752018,0.0000040746004,0.00023382631,5.8724095e-7,0.000057690875],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9993491,0.00006748861,0.00017463679,0.000164297,0.0000415924,0.00020289002],"domain_scores_gemma":[0.99967664,0.0001645571,0.0000532538,0.000027094644,0.000022806214,0.000055651453],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00020267231,0.000082725404,0.0001526807,0.000034438075,0.000056370085,0.000006600022,0.00005821709,0.0001711213,0.000042955493],"category_scores_gemma":[0.000036640504,0.000037835376,0.00002127644,0.00016653453,0.00003164475,0.00005595718,0.00004479909,0.00006495672,0.000004886448],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000040424944,0.00002472534,0.35636812,0.0000013837491,0.0000020758196,1.4082576e-7,0.00009168661,0.0000022896152,0.6420862,0.00055722723,0.000035462715,0.00079025415],"study_design_scores_gemma":[0.00013371443,0.0002152691,0.9911103,0.000014038553,0.0000068888867,0.000017661312,0.0001459926,0.00006143102,0.0070121414,0.00023710995,0.00095702865,0.000088370514],"about_ca_topic_score_codex":0.0012799286,"about_ca_topic_score_gemma":0.0045931903,"teacher_disagreement_score":0.6350741,"about_ca_system_score_codex":0.000017189112,"about_ca_system_score_gemma":0.0000040222667,"threshold_uncertainty_score":0.25631082},"labels":[],"label_agreement":null},{"id":"W2165896265","doi":"10.1186/1471-2229-10-143","title":"Relationship, evolutionary fate and function of two maize co-orthologs of rice GW2 associated with kernel size and weight","year":2010,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Genetic Mapping and Diversity in Plants and Animals","field":"Biochemistry, Genetics and Molecular Biology","cited_by":194,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ministry of Agriculture","funders":"Henan Agricultural University","keywords":"Biology; Indel; Genetics; Quantitative trait locus; Gene; Single-nucleotide polymorphism; Locus (genetics); Inbred strain; Genetic linkage; Nucleotide diversity; Haplotype; Allele; Genotype","score_opus":0.012728127047826285,"score_gpt":0.2245174202412362,"score_spread":0.21178929319340992,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2165896265","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99821645,0.0002594438,0.00016949158,0.00002316189,0.00006617091,0.00006813258,0.00043400264,0.0000059818226,0.0007571933],"genre_scores_gemma":[0.99848825,0.00007766358,0.00074233185,0.000031308133,0.000031703985,0.0000018800881,0.00037717784,0.0000034567609,0.0002462375],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.999458,0.000059331167,0.00013577816,0.00019326693,0.000040615534,0.000113009206],"domain_scores_gemma":[0.9995525,0.0001290469,0.00013402554,0.00009418606,0.000050761668,0.000039494033],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015169838,0.00008803786,0.00014421373,0.00003134209,0.00006227447,0.000002993415,0.000049821094,0.00016846381,0.0000143261705],"category_scores_gemma":[0.00014059052,0.00006917263,0.000021543143,0.000034297987,0.00020674826,0.0000023592775,0.000042438412,0.00007734163,7.6899323e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00016268995,0.000027013153,0.5722962,0.000016312799,0.000028911103,6.6513263e-7,0.000013832869,0.0000024004453,0.42669466,0.0004987593,0.00022803473,0.00003053721],"study_design_scores_gemma":[0.0009608061,0.0004661731,0.98749036,0.000011565545,0.0000498188,0.00005313376,0.00004325962,0.000032265758,0.009007212,0.00037512818,0.0013982245,0.000112080925],"about_ca_topic_score_codex":0.000042572283,"about_ca_topic_score_gemma":0.000075464406,"teacher_disagreement_score":0.41768745,"about_ca_system_score_codex":0.0000014016377,"about_ca_system_score_gemma":0.000033995588,"threshold_uncertainty_score":0.2820778},"labels":[],"label_agreement":null},{"id":"W2166776217","doi":"10.1186/1471-2229-11-145","title":"Transcript profiling reveals expression differences in wild-type and glabrous soybean lines","year":2011,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Soybean genetics and cultivation","field":"Agricultural and Biological Sciences","cited_by":25,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"U.S. Department of Agriculture","keywords":"Biology; Gene; Genetics; Indel; Mutant; Gene expression profiling; Wild type; RNA-Seq; Gene expression; Genome; Trichome; Transcriptome; Single-nucleotide polymorphism; Botany; Genotype","score_opus":0.08205425712434497,"score_gpt":0.23100890509261787,"score_spread":0.1489546479682729,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2166776217","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.999116,0.0003486382,0.0000075752673,0.00003540943,0.000119947654,0.00013938492,0.000034112094,0.000024788704,0.00017412238],"genre_scores_gemma":[0.9990047,0.00011838389,0.0005676522,0.000047536683,0.000087693836,0.000008665911,0.000117304124,5.834853e-7,0.00004748639],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99929684,0.00008682787,0.00017018657,0.00023109931,0.000038697435,0.00017635168],"domain_scores_gemma":[0.9997698,0.00008281469,0.000052502786,0.000029486775,0.000025000889,0.00004041231],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00011275317,0.00009734621,0.00014695857,0.000013219121,0.000060419105,0.000010103014,0.00010380348,0.00011942307,0.000048124522],"category_scores_gemma":[0.000033784512,0.000034771674,0.00001745037,0.00012131178,0.000037460413,0.000028871955,0.000024614013,0.00006056478,0.0000036273075],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000042327036,0.00002205995,0.43386838,0.0000034275345,0.0000012185187,7.148268e-7,0.00013372253,2.0130216e-8,0.56340736,0.00022235248,0.00001495456,0.0022834332],"study_design_scores_gemma":[0.00016311154,0.00035772438,0.9317821,0.000037412014,0.000004299025,0.000010845177,0.00045949116,0.00004776711,0.06429619,0.0024950362,0.0001884341,0.00015752942],"about_ca_topic_score_codex":0.0002007814,"about_ca_topic_score_gemma":0.00068265497,"teacher_disagreement_score":0.49911118,"about_ca_system_score_codex":0.0000033957579,"about_ca_system_score_gemma":0.000004263482,"threshold_uncertainty_score":0.14179477},"labels":[],"label_agreement":null},{"id":"W2169281270","doi":"10.1186/1471-2229-14-19","title":"Root parasitic plant Orobanche aegyptiaca and shoot parasitic plant Cuscuta australis obtained Brassicaceae-specific strictosidine synthase-like genes by horizontal gene transfer","year":2014,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Plant Parasitism and Resistance","field":"Agricultural and Biological Sciences","cited_by":83,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Thousand Young Talents Program of China; Kunming Institute of Botany, Chinese Academy of Sciences; University of California, Davis; Natural Science Foundation of Yunnan Province; Pennsylvania State University; National Natural Science Foundation of China; Institute of Botany, Chinese Academy of Sciences; University of Alberta; University of Pennsylvania","keywords":"Biology; Horizontal gene transfer; Parasitic plant; Cuscuta; Brassicaceae; Gene family; Gene; Botany; Genetics; Gene duplication; Phylogenetic tree; Genome; Host (biology)","score_opus":0.021713085931944938,"score_gpt":0.21265460480446483,"score_spread":0.1909415188725199,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2169281270","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9766083,0.0027773837,0.00034725651,0.00040043241,0.00043883343,0.00046039972,0.018643295,0.00017545214,0.00014865097],"genre_scores_gemma":[0.9870007,0.0016966942,0.00012812595,0.00017901121,0.0005405726,0.00005676344,0.01021389,0.000007521547,0.00017670389],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99636966,0.00045802348,0.00064299075,0.001111188,0.0002747313,0.0011433938],"domain_scores_gemma":[0.9980767,0.0011114856,0.00013826141,0.00019376812,0.0000357709,0.00044404707],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00038198024,0.0006315243,0.0008483626,0.000057935755,0.00045736527,0.000117352225,0.00054458284,0.00054949365,0.00017411773],"category_scores_gemma":[0.000033093536,0.0002880704,0.00017210319,0.00026398693,0.0003131916,0.00014340875,0.00004520258,0.00033358482,0.00006438101],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00048623324,0.00021623286,0.060999554,0.000038245344,0.000072462346,0.00009555974,0.000030131036,0.0000067015326,0.92737913,0.0013380138,0.006960138,0.0023776009],"study_design_scores_gemma":[0.00313205,0.0035641328,0.41709864,0.00026160173,0.00031664222,0.003095267,0.00026064823,0.0005266639,0.2656237,0.0004018879,0.3024581,0.0032606758],"about_ca_topic_score_codex":0.00036987712,"about_ca_topic_score_gemma":0.0039650737,"teacher_disagreement_score":0.66175544,"about_ca_system_score_codex":0.000050134957,"about_ca_system_score_gemma":0.000029072002,"threshold_uncertainty_score":0.99995714},"labels":[],"label_agreement":null},{"id":"W2176109306","doi":"10.1186/s12870-015-0664-5","title":"The crucial role of PpMYB10.1 in anthocyanin accumulation in peach and relationships between its allelic type and skin color phenotype","year":2015,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Plant Gene Expression Analysis","field":"Biochemistry, Genetics and Molecular Biology","cited_by":152,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute for Biological Sciences","funders":"Japan Society for the Promotion of Science","keywords":"Biology; Anthocyanin; Phenotype; Allele; Skin color; Genetics; Botany; Gene","score_opus":0.07652717741817618,"score_gpt":0.3111400956787756,"score_spread":0.23461291826059943,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2176109306","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9977511,0.001672225,0.000033311593,0.000052951655,0.000032385946,0.000121681944,0.000060531835,0.0000031390018,0.00027266055],"genre_scores_gemma":[0.9988306,0.0003458247,0.00023593922,0.000012330226,0.00006017237,0.000005717468,0.00043652934,0.0000053731296,0.00006749054],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99902135,0.00033547706,0.00023790565,0.00021503383,0.000048219266,0.00014202391],"domain_scores_gemma":[0.99953735,0.00015006198,0.00009677937,0.000117553005,0.000046993566,0.00005124232],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00057241926,0.000088244735,0.00016753735,0.00007698094,0.000042201875,0.0000077157165,0.00009903166,0.00021037017,0.0000018083358],"category_scores_gemma":[0.00059162424,0.00006680119,0.000014057682,0.00012803584,0.000061865176,0.000004140271,0.000101557445,0.00010084017,0.0000025425466],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003731384,0.000021254704,0.572291,0.0000054071397,0.000021961878,0.0000010322491,0.00025270757,0.000111423506,0.4250171,0.00030435208,0.00041793808,0.0011826903],"study_design_scores_gemma":[0.0024099601,0.00048718048,0.8930532,0.00003572441,0.0000473429,0.00003208665,0.0010986915,0.0051242756,0.07339679,0.0009509569,0.02297658,0.00038723325],"about_ca_topic_score_codex":0.000104549974,"about_ca_topic_score_gemma":0.0025723877,"teacher_disagreement_score":0.3516203,"about_ca_system_score_codex":0.0000097308075,"about_ca_system_score_gemma":0.0000843625,"threshold_uncertainty_score":0.27240735},"labels":[],"label_agreement":null},{"id":"W2213940523","doi":"10.1186/s12870-015-0638-7","title":"Changes in hormone flux and signaling in white spruce (Picea glauca) seeds during the transition from dormancy to germination in response to temperature cues","year":2015,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Seed Germination and Physiology","field":"Agricultural and Biological Sciences","cited_by":22,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Simon Fraser University; University of British Columbia","funders":"Natural Sciences and Engineering Research Council of Canada; European Commission","keywords":"Germination; Biology; Dormancy; Abscisic acid; Seed dormancy; Plant hormone; Gibberellin; Botany; Black spruce; Auxin; Horticulture; Taiga; Gene; Biochemistry; Ecology","score_opus":0.02174592075568603,"score_gpt":0.23539711930235618,"score_spread":0.21365119854667014,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2213940523","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.995214,0.00017431112,7.4722533e-7,0.004138886,0.000070587725,0.0002588,0.00011509453,0.000015464322,0.000012123823],"genre_scores_gemma":[0.9990211,0.000019372408,0.000043398333,0.00052930746,0.00011964146,0.000039702158,0.00017419916,8.632382e-7,0.00005240958],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.998915,0.00040598656,0.0001688783,0.00025030255,0.00005475997,0.0002050746],"domain_scores_gemma":[0.9995296,0.00031198972,0.00003418997,0.000037488066,0.000024155052,0.00006257091],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00048047936,0.00010593188,0.00016588203,0.00009403562,0.00004082578,0.000017660559,0.000110657915,0.00015642255,0.000016175072],"category_scores_gemma":[0.00008468034,0.000044874505,0.0000128448855,0.00042057302,0.000023180573,0.000052681942,0.000036557467,0.00012345253,0.000009258376],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0010520559,0.000020078847,0.035480388,0.0000025752254,0.000001041834,0.0000059983568,0.0029613303,0.0000630515,0.95943874,0.000009688438,0.0000263979,0.0009386531],"study_design_scores_gemma":[0.00035958062,0.00027823768,0.9878737,0.00003292919,0.0000013226011,0.0000065826107,0.00154386,0.00008563457,0.009095629,0.00015460173,0.00045114566,0.000116782256],"about_ca_topic_score_codex":0.00044180287,"about_ca_topic_score_gemma":0.019183768,"teacher_disagreement_score":0.9523933,"about_ca_system_score_codex":0.000038137427,"about_ca_system_score_gemma":0.000010547267,"threshold_uncertainty_score":0.99871355},"labels":[],"label_agreement":null},{"id":"W2218658492","doi":"10.1186/s12870-015-0683-2","title":"Cereal cystatins delay sprouting and nutrient loss in tubers of potato, Solanum tuberosum","year":2015,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Potato Plant Research","field":"Agricultural and Biological Sciences","cited_by":18,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Cegep de Saint Jerome; Université Laval","funders":"Agriculture and Agri-Food Canada; Natural Sciences and Engineering Research Council of Canada","keywords":"Biology; Solanum tuberosum; Sprouting; Nutrient; Agronomy; Horticulture; Ecology","score_opus":0.051616377236541985,"score_gpt":0.26519572719544254,"score_spread":0.21357934995890054,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2218658492","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.998187,0.0001769001,0.000007188965,0.00018495448,0.00007330127,0.00018991863,0.0005962331,0.000021351625,0.0005631349],"genre_scores_gemma":[0.9992231,0.000050734227,0.0001870956,0.000041943073,0.00005601274,0.000009317652,0.00039403024,8.078149e-7,0.000036943315],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99863017,0.00020437059,0.00028859984,0.00029581116,0.00013035632,0.00045071886],"domain_scores_gemma":[0.9991634,0.00050342747,0.00008407028,0.00004657311,0.00004370627,0.00015881856],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006105825,0.00012708412,0.00026028792,0.00003474312,0.000042852746,0.000013971382,0.00019790384,0.00013424012,0.000022309008],"category_scores_gemma":[0.00016717176,0.000050397077,0.00003117255,0.00018772276,0.00015319107,0.000047749385,0.00014283684,0.00015258507,0.000012050805],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002576102,0.00008007754,0.9089438,0.000016304211,0.000008857105,0.000045787623,0.00024654038,0.0000033373346,0.0857093,0.0016091064,0.00032603697,0.0027532375],"study_design_scores_gemma":[0.002576523,0.0021412885,0.9482243,0.00013235705,0.000017949775,0.0012079927,0.002813982,0.0016357332,0.024722217,0.0045913463,0.01116872,0.0007676108],"about_ca_topic_score_codex":0.0036695919,"about_ca_topic_score_gemma":0.008691877,"teacher_disagreement_score":0.060987085,"about_ca_system_score_codex":0.000030199131,"about_ca_system_score_gemma":0.000037397098,"threshold_uncertainty_score":0.55473495},"labels":[],"label_agreement":null},{"id":"W2226343700","doi":"10.1186/s12870-015-0680-5","title":"Hairy Canola (Brasssica napus) re-visited: Down-regulating TTG1 in an AtGL3-enhanced hairy leaf background improves growth, leaf trichome coverage, and metabolite gene expression diversity","year":2016,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Plant Molecular Biology Research","field":"Agricultural and Biological Sciences","cited_by":32,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan; Dow Chemical (Canada); Agriculture and Agri-Food Canada","funders":"Agriculture and Agri-Food Canada; Natural Sciences and Engineering Research Council of Canada; Canola Council of Canada; Saskatchewan Canola Development Commission","keywords":"Trichome; Biology; Canola; Brassica; Botany; Arabidopsis; Shade avoidance; Gene; Genetics; Mutant","score_opus":0.03492687897366757,"score_gpt":0.2539404093587143,"score_spread":0.21901353038504673,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2226343700","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9970843,0.00066150364,0.000094683855,0.00030987515,0.000178102,0.0003832882,0.0010117204,0.000097091266,0.00017942186],"genre_scores_gemma":[0.9974989,0.0005383057,0.00032762025,0.00020284437,0.00022064165,0.000026036028,0.00085117924,0.000003602121,0.0003308561],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9965426,0.0008839863,0.00041621586,0.0010672479,0.00021117093,0.00087878323],"domain_scores_gemma":[0.9982766,0.000980515,0.00020797158,0.00018671511,0.00008610609,0.0002620742],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006722565,0.0003606397,0.0005732065,0.000110404755,0.00047819302,0.000061546736,0.00060272764,0.0005439152,0.000103067614],"category_scores_gemma":[0.0002448529,0.00014034369,0.00010202762,0.0003540305,0.0003250836,0.00033164755,0.00093129685,0.00028920535,0.000038340233],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0004703399,0.00006462724,0.18748605,0.000009586228,0.000018259674,0.00002194673,0.000043730677,3.6936464e-7,0.8046624,0.000087196044,0.00012296569,0.00701251],"study_design_scores_gemma":[0.0014806014,0.0007087696,0.65362364,0.00006277872,0.000021351036,0.00007598508,0.00014237812,0.00003857902,0.3413842,0.00068874593,0.0011626187,0.00061036384],"about_ca_topic_score_codex":0.0009644611,"about_ca_topic_score_gemma":0.0034626832,"teacher_disagreement_score":0.4661376,"about_ca_system_score_codex":0.00006941404,"about_ca_system_score_gemma":0.00003956462,"threshold_uncertainty_score":0.57230496},"labels":[],"label_agreement":null},{"id":"W2257605518","doi":"10.1186/s12870-016-0703-x","title":"Microtubule encounter-based catastrophe in Arabidopsis cortical microtubule arrays","year":2016,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Microtubule and mitosis dynamics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":12,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"Natural Sciences and Engineering Research Council of Canada; University of Saskatchewan","keywords":"Arabidopsis; Microtubule; Biology; Biophysics; Live cell imaging; Cell biology; Biological system; Cell; Genetics; Mutant","score_opus":0.011567685029811266,"score_gpt":0.2334848665103263,"score_spread":0.22191718148051504,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2257605518","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97359556,0.00038186362,0.024010714,0.0001991867,0.00029591078,0.0003102165,0.00095119403,0.000025470647,0.0002298963],"genre_scores_gemma":[0.9946242,0.0001905103,0.0030161536,0.0005893889,0.00023315549,0.00007626143,0.00092565006,0.000033602275,0.00031109704],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99802,0.00019174672,0.0004164486,0.00067536265,0.000068269466,0.00062820874],"domain_scores_gemma":[0.999117,0.00008741034,0.00010820655,0.00051539566,0.000048868013,0.00012308224],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00024400948,0.00029290188,0.00031767107,0.00011544318,0.000063265485,0.000014588311,0.0003789904,0.0003973254,0.00011514416],"category_scores_gemma":[0.00012781285,0.0002113802,0.00013921362,0.000092307,0.00023425023,0.0000045862835,0.00012360582,0.00014301903,0.00012538137],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00029866525,0.00013684006,0.05682099,0.00001862405,0.000022707953,0.000009576443,0.000008545262,0.000010235709,0.9396583,0.00013035473,0.0024438477,0.00044134742],"study_design_scores_gemma":[0.0026115729,0.0006002243,0.006881202,0.0000857622,0.000024448691,0.00010890438,0.000029654035,0.00009143067,0.8993501,0.00007276731,0.08958168,0.00056224136],"about_ca_topic_score_codex":0.00010173136,"about_ca_topic_score_gemma":0.001688958,"teacher_disagreement_score":0.08713783,"about_ca_system_score_codex":0.000050326045,"about_ca_system_score_gemma":0.0002006971,"threshold_uncertainty_score":0.8619834},"labels":[],"label_agreement":null},{"id":"W2260576057","doi":"10.1186/s12870-016-0717-4","title":"Lignin biosynthesis in wheat (Triticum aestivum L.): its response to waterlogging and association with hormonal levels","year":2016,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Plant responses to water stress","field":"Agricultural and Biological Sciences","cited_by":130,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Agriculture and Agri-Food Canada; University of Manitoba","funders":"University of Manitoba; BioFuelNet Canada; University of Saskatchewan","keywords":"Lignin; Biology; Phenylpropanoid; Abiotic component; Monolignol; Botany; Biochemistry; Biosynthesis; Gene","score_opus":0.02491663423449004,"score_gpt":0.21437381729000457,"score_spread":0.18945718305551454,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2260576057","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99307054,0.000046752266,0.000010062189,0.0053858995,0.000049211343,0.00019777812,0.0011592088,0.000048403024,0.000032125754],"genre_scores_gemma":[0.999017,0.00002162496,0.00014747732,0.0001527471,0.00006142597,0.000027879925,0.000032883087,0.00000120763,0.0005377775],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99833226,0.00050724583,0.00019914641,0.00038334212,0.00010927916,0.00046869685],"domain_scores_gemma":[0.99726063,0.002484041,0.0000678876,0.0000429413,0.00003176354,0.000112733134],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006815508,0.00016441608,0.00023954076,0.00006304834,0.00007401323,0.000023450508,0.00016433022,0.0001828425,0.0000306607],"category_scores_gemma":[0.0004177534,0.000049504648,0.000023723083,0.00015003083,0.00003582608,0.00008928487,0.00008222847,0.000067148074,0.00005151311],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.001496535,0.000019362064,0.19380157,0.0000022045576,0.0000066298962,0.000023459053,0.00002989774,2.9575543e-7,0.7996862,0.000021557144,0.00013037564,0.0047819354],"study_design_scores_gemma":[0.00029796615,0.0005087985,0.79035354,0.000088733184,0.0000056156314,0.000077061035,0.00002523013,0.0000065548043,0.20406975,0.000035113724,0.0043314546,0.00020017535],"about_ca_topic_score_codex":0.00014421057,"about_ca_topic_score_gemma":0.0037858258,"teacher_disagreement_score":0.59655195,"about_ca_system_score_codex":0.00008548082,"about_ca_system_score_gemma":0.000018359011,"threshold_uncertainty_score":0.21125796},"labels":[],"label_agreement":null},{"id":"W2288201800","doi":"10.1186/s12870-016-0746-z","title":"Overexpression of plum auxin receptor PslTIR1 in tomato alters plant growth, fruit development and fruit shelf-life characteristics","year":2016,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Plant Molecular Biology Research","field":"Agricultural and Biological Sciences","cited_by":34,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"Ontario Ministry of Agriculture, Food and Rural Affairs; University of Wyoming","keywords":"Auxin; Biology; Ubiquitin ligase; Genetically modified tomato; Ripening; Transgene; Cell biology; F-box protein; Parthenocarpy; Solanum; Botany; Genetically modified crops; Ubiquitin; Gene; Biochemistry","score_opus":0.03319011626469995,"score_gpt":0.2421669768900484,"score_spread":0.20897686062534845,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2288201800","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99743474,0.000110056746,0.000011014498,0.00035801614,0.00010168678,0.0002548725,0.0016272984,0.00003284015,0.000069452006],"genre_scores_gemma":[0.9983566,0.00020762112,0.000418574,0.000154586,0.000076395205,0.000033301054,0.00068362395,0.0000019149268,0.00006738307],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99814034,0.0002893862,0.00045342962,0.00047204448,0.00013511443,0.00050966954],"domain_scores_gemma":[0.9988372,0.00070767285,0.00017016954,0.00007651794,0.0000382413,0.00017023187],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00041421648,0.00021248701,0.00040802435,0.00005652671,0.0000789396,0.000011831857,0.00033725437,0.00032645193,0.00016990387],"category_scores_gemma":[0.0003367651,0.00007491248,0.000044518303,0.0001224165,0.00018064739,0.00004936437,0.00026091863,0.00013188216,0.00005056521],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00024673206,0.000050693005,0.2606338,0.000017629874,0.000014246961,0.000010163098,0.000038884533,2.3101787e-8,0.7351237,0.0002668219,0.0003816327,0.0032156776],"study_design_scores_gemma":[0.0007422801,0.0003487508,0.83423847,0.00031699665,0.0000054619923,0.000100612735,0.00007311894,0.000020169191,0.15129085,0.00013979146,0.012311258,0.00041227246],"about_ca_topic_score_codex":0.00013503116,"about_ca_topic_score_gemma":0.00044605395,"teacher_disagreement_score":0.58383286,"about_ca_system_score_codex":0.00003726656,"about_ca_system_score_gemma":0.00005936387,"threshold_uncertainty_score":0.30548424},"labels":[],"label_agreement":null},{"id":"W2294091492","doi":"10.1186/s12870-016-0751-2","title":"A proteome analysis of freezing tolerance in red clover (Trifolium pratense L.)","year":2016,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Plant pathogens and resistance mechanisms","field":"Agricultural and Biological Sciences","cited_by":47,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Agriculture and Agri-Food Canada","funders":"Agriculture and Agri-Food Canada; Natural Sciences and Engineering Research Council of Canada; Australian Government","keywords":"Biology; Proteome; Red Clover; Freezing tolerance; Cultivar; Acclimatization; Botany; Horticulture; Biochemistry; Gene","score_opus":0.02352567700742708,"score_gpt":0.2132552361183396,"score_spread":0.18972955911091252,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2294091492","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99766827,0.00009583546,0.000063659754,0.00028283012,0.00008075045,0.00017441736,0.0014123935,0.000028434539,0.00019339325],"genre_scores_gemma":[0.9991831,0.0000843877,0.00022188475,0.000048720318,0.000055760258,0.00001914631,0.00011829094,4.592018e-7,0.00026820536],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99893236,0.0001288588,0.0002871403,0.00029646445,0.000072780684,0.00028239732],"domain_scores_gemma":[0.9994645,0.00024335047,0.00014957855,0.00006476931,0.00003319267,0.000044584172],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00026838027,0.00011348159,0.00036566096,0.00006302885,0.000033683984,0.000004978835,0.00017884054,0.00015075653,0.00013422144],"category_scores_gemma":[0.00006737625,0.000032379172,0.00011257802,0.0005870524,0.000046110676,0.000035274654,0.00003653719,0.000047478996,0.000008335352],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014445579,0.000035302302,0.06286416,0.0000035662445,0.000032506785,0.000009757899,0.000008908109,0.0000067385836,0.9355583,0.0005338216,0.000055465258,0.0007469716],"study_design_scores_gemma":[0.00069018296,0.0004229616,0.8293171,0.00011972251,0.0001257795,0.000021763628,0.00006328638,0.00068463356,0.1552334,0.0010452602,0.011837031,0.0004388828],"about_ca_topic_score_codex":0.00014410735,"about_ca_topic_score_gemma":0.009539325,"teacher_disagreement_score":0.78032494,"about_ca_system_score_codex":0.000016055761,"about_ca_system_score_gemma":0.000009662895,"threshold_uncertainty_score":0.5323167},"labels":[],"label_agreement":null},{"id":"W2307194069","doi":"10.1186/s12870-016-0752-1","title":"Effect of atmospheric carbon dioxide levels and nitrate fertilization on glucosinolate biosynthesis in mechanically damaged Arabidopsis plants","year":2016,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Plant responses to elevated CO2","field":"Agricultural and Biological Sciences","cited_by":22,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"Division of Chemistry; Agriculture and Agri-Food Canada; Natural Sciences and Engineering Research Council of Canada; National Science Foundation","keywords":"Nitrate; Biology; Human fertilization; Carbon dioxide; Jasmonate; Arabidopsis; Botany; Methyl jasmonate; Agronomy; Horticulture; Biochemistry; Ecology","score_opus":0.01807406258842764,"score_gpt":0.2199942518556603,"score_spread":0.20192018926723265,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2307194069","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99889076,0.00008501369,0.0000070150395,0.00012926235,0.00005826039,0.00024345685,0.00043455104,0.00004705938,0.00010464615],"genre_scores_gemma":[0.99965256,0.00014351314,0.000032453136,0.000046485195,0.000021842925,0.000015248771,0.000049547358,0.0000016936469,0.000036627043],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.998065,0.0008222478,0.00030103073,0.000386635,0.000092328366,0.00033277765],"domain_scores_gemma":[0.9965867,0.0031071058,0.00014284796,0.00007711616,0.000015978598,0.00007029775],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005293514,0.00020654516,0.00037713491,0.000019544681,0.000040032242,0.0000078268995,0.00019614998,0.00023792211,0.000036360652],"category_scores_gemma":[0.00039048176,0.00006681289,0.00004598182,0.000196958,0.00007050333,0.000041097766,0.00005332075,0.00008215761,0.000008344538],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0019306298,0.000028724142,0.07069936,0.000009371919,0.00001271459,0.000010135268,0.000006403547,9.989869e-7,0.90415144,0.00008149082,0.000002346241,0.023066385],"study_design_scores_gemma":[0.00049856293,0.0012907161,0.31305465,0.00012014707,0.000012965565,0.000027668217,0.000006234391,0.00013228376,0.684453,0.00013522009,0.00008502985,0.00018349181],"about_ca_topic_score_codex":0.00021131079,"about_ca_topic_score_gemma":0.0012798675,"teacher_disagreement_score":0.2423553,"about_ca_system_score_codex":0.000029967823,"about_ca_system_score_gemma":0.000011459288,"threshold_uncertainty_score":0.27245507},"labels":[],"label_agreement":null},{"id":"W2311871742","doi":"10.1186/s12870-016-0760-1","title":"Transcriptome and metabolite profiling reveals that prolonged drought modulates the phenylpropanoid and terpenoid pathway in white grapes (Vitis vinifera L.)","year":2016,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Horticultural and Viticultural Research","field":"Agricultural and Biological Sciences","cited_by":351,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"Natural Sciences and Engineering Research Council of Canada; University of British Columbia; Fondazione Edmund Mach","keywords":"Phenylpropanoid; Biology; Ripening; Veraison; Secondary metabolism; Anthocyanin; Flavonoid biosynthesis; Flavonoid; Botany; Primary metabolite; Transcriptome; Wine; Secondary metabolite; Carotenoid; Wine grape; Metabolism; Gene; Gene expression; Food science; Biochemistry; Cultivar; Biosynthesis","score_opus":0.03643982676324536,"score_gpt":0.24199340609925518,"score_spread":0.20555357933600982,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2311871742","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99318016,0.0018023993,0.000002012533,0.0038653282,0.0000622292,0.0005861729,0.00038727312,0.000043666492,0.00007077383],"genre_scores_gemma":[0.99803716,0.0009655598,0.000073909745,0.00017382493,0.00012858688,0.000101405516,0.00008848273,0.0000015705098,0.0004295191],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9981537,0.00037105518,0.00028014724,0.0004947256,0.00013685603,0.000563529],"domain_scores_gemma":[0.99925286,0.00044382858,0.00007205671,0.00006363762,0.000043251708,0.00012434479],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00046984066,0.0002322554,0.0003394956,0.00002205222,0.00022103626,0.00007824367,0.00022698725,0.00015901208,0.000047472466],"category_scores_gemma":[0.00010208683,0.000052173822,0.00006159573,0.00018308536,0.00023870704,0.00020143518,0.000100277764,0.00015837279,0.000008341163],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000815942,0.000019659961,0.16039492,0.000012392883,0.000010595224,0.0000055673104,0.00014704898,4.1572015e-8,0.82073605,0.00086700846,0.0000108684135,0.017714262],"study_design_scores_gemma":[0.0004578348,0.0003533261,0.89365166,0.000070710616,0.000012287861,0.00012033437,0.00035104895,0.000018963576,0.099103525,0.0013578433,0.004188211,0.0003142745],"about_ca_topic_score_codex":0.00012570774,"about_ca_topic_score_gemma":0.0012084614,"teacher_disagreement_score":0.7332567,"about_ca_system_score_codex":0.000012677035,"about_ca_system_score_gemma":0.000007809087,"threshold_uncertainty_score":0.21275868},"labels":[],"label_agreement":null},{"id":"W2395588197","doi":"10.1186/s12870-016-0808-2","title":"Identification and characterization of miRNAs and targets in flax (Linum usitatissimum) under saline, alkaline, and saline-alkaline stresses","year":2016,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Plant Molecular Biology Research","field":"Agricultural and Biological Sciences","cited_by":69,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Alberta Innovates","funders":"Heilongjiang Academy of Agricultural Sciences","keywords":"Linum; Biology; microRNA; Transcriptome; Gene expression profiling; Gene expression; Gene; Genetics; Botany","score_opus":0.02482515588669436,"score_gpt":0.2579676757052542,"score_spread":0.23314251981855982,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2395588197","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99665934,0.0003851707,0.00020779946,0.0010499944,0.000052593743,0.0002120518,0.0014083785,0.000017082617,0.0000075699472],"genre_scores_gemma":[0.99658597,0.0016856939,0.000115336865,0.00007431688,0.00005991394,0.000011579368,0.0013513811,0.000001468804,0.00011437039],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99874336,0.00024845937,0.00032442014,0.0003782203,0.00006842318,0.00023711481],"domain_scores_gemma":[0.99917334,0.00049334887,0.00014761757,0.000054911812,0.000056517423,0.00007428589],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00034069805,0.00013911605,0.00025209636,0.000057119854,0.00005656016,0.000016833295,0.00010866346,0.0002077188,0.000042126234],"category_scores_gemma":[0.00015749971,0.00005414969,0.000017429446,0.00013159933,0.0002387297,0.00007720339,0.00010466369,0.00006659096,0.0000045654983],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001151971,0.000029127277,0.110289164,0.000015951398,0.0000100481675,0.0000032388627,0.000014764248,1.26006e-7,0.8855642,0.00048579022,0.000027706748,0.0034446672],"study_design_scores_gemma":[0.0005383503,0.00024329942,0.90766346,0.000060213555,0.000011073791,0.00006462053,0.0000438515,0.00017150374,0.088199735,0.00093307305,0.0018782536,0.00019257831],"about_ca_topic_score_codex":0.00016023921,"about_ca_topic_score_gemma":0.0023166316,"teacher_disagreement_score":0.7973743,"about_ca_system_score_codex":0.000007541897,"about_ca_system_score_gemma":0.000012658466,"threshold_uncertainty_score":0.22081602},"labels":[],"label_agreement":null},{"id":"W2482446043","doi":"10.1186/s12870-016-0822-4","title":"Single and multiple resistance QTL delay symptom appearance and slow down root colonization by Aphanomyces euteiches in pea near isogenic lines","year":2016,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Genetic and Environmental Crop Studies","field":"Agricultural and Biological Sciences","cited_by":39,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"Région Bretagne; Conseil Régional de Bretagne; Institut National de la Recherche Agronomique; Agence Nationale de la Recherche","keywords":"Biology; Colonization; Resistance (ecology); Quantitative trait locus; Horticulture; Agronomy; Microbiology; Genetics; Gene","score_opus":0.01323674285864701,"score_gpt":0.18083305559379592,"score_spread":0.1675963127351489,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2482446043","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99183416,0.0072053284,0.000017270078,0.00056006346,0.0000387411,0.00012087434,0.00017290644,0.000016667456,0.00003400618],"genre_scores_gemma":[0.9982817,0.0011046213,0.00015072909,0.000051705505,0.00004197451,0.000010267277,0.000047257057,8.687909e-7,0.00031085126],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9992783,0.00006187719,0.00013928024,0.0002834045,0.000037680347,0.00019944388],"domain_scores_gemma":[0.99968964,0.00018207518,0.000053947337,0.000029315326,0.0000067293336,0.00003827122],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000077965116,0.000112650756,0.000150271,0.0000065535187,0.00013199708,0.00001683124,0.00007127366,0.000087278626,0.000010827779],"category_scores_gemma":[0.000035779103,0.000040674582,0.000015220687,0.00006145083,0.00023964077,0.00003772396,0.0000711609,0.000027306613,0.000006888],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006117371,0.000024527177,0.63544846,0.000005753116,0.0000045236748,7.259666e-7,0.000040217747,8.5801105e-7,0.36037782,0.000009238518,0.00017414347,0.0038525457],"study_design_scores_gemma":[0.0004508565,0.00026535164,0.9577657,0.00005077981,0.0000071405802,0.000012280771,0.00012151231,0.00003066271,0.010410385,0.00012651406,0.030548066,0.00021074878],"about_ca_topic_score_codex":0.0001167001,"about_ca_topic_score_gemma":0.006895097,"teacher_disagreement_score":0.34996745,"about_ca_system_score_codex":0.0000117854215,"about_ca_system_score_gemma":0.0000021885432,"threshold_uncertainty_score":0.3847626},"labels":[],"label_agreement":null},{"id":"W2507376060","doi":"10.1186/s12870-016-0877-2","title":"Multi-environment QTL studies suggest a role for cysteine-rich protein kinase genes in quantitative resistance to blackleg disease in Brassica napus","year":2016,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Plant-Microbe Interactions and Immunity","field":"Agricultural and Biological Sciences","cited_by":70,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan; Agriculture and Agri-Food Canada","funders":"NSW Department of Primary Industries; Agriculture Victoria; Institut National de la Recherche Agronomique; Agriculture and Agri-Food Canada; Department of Economic Development, Jobs, Transport and Resources, State Government of Victoria","keywords":"Biology; Quantitative trait locus; Leptosphaeria maculans; Blackleg; Introgression; Genetics; Canola; Plant disease resistance; Doubled haploidy; Candidate gene; Gene; Brassica; Botany","score_opus":0.04913348965220578,"score_gpt":0.2785748968640076,"score_spread":0.22944140721180184,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2507376060","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99436754,0.001280223,0.000055504555,0.0014507546,0.00007601949,0.00079829426,0.001940094,0.000019365327,0.000012220062],"genre_scores_gemma":[0.9966338,0.00024646378,0.0014715209,0.000080527854,0.000040920222,0.0004586335,0.00014009519,0.0000015035954,0.00092653616],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99871695,0.00021752845,0.00029358605,0.00037744932,0.00004797581,0.0003465333],"domain_scores_gemma":[0.99902976,0.0006855161,0.000094073366,0.00007961381,0.000029544617,0.00008149374],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00023276891,0.0001693375,0.00026727334,0.000045224933,0.00009790249,0.000012689632,0.00020706118,0.000073057316,0.000020717416],"category_scores_gemma":[0.00031960756,0.00006125119,0.000051440955,0.00013094727,0.0000893337,0.000090014335,0.00010201981,0.00007020011,0.000050074053],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0009160827,0.00023823956,0.037658904,0.00001501945,0.000012271303,0.000010811561,0.000097073294,0.000005630604,0.95912045,0.00026650095,0.00015514749,0.0015038853],"study_design_scores_gemma":[0.00267066,0.0021327292,0.71818215,0.0009648438,0.000027569973,0.000011037254,0.002521242,0.00016575483,0.10667878,0.0012850035,0.1642162,0.0011440304],"about_ca_topic_score_codex":0.00037374694,"about_ca_topic_score_gemma":0.03209406,"teacher_disagreement_score":0.85244167,"about_ca_system_score_codex":0.00009335554,"about_ca_system_score_gemma":0.000013764596,"threshold_uncertainty_score":0.9855677},"labels":[],"label_agreement":null},{"id":"W2525584856","doi":"10.1186/s12870-016-0909-y","title":"Maize plants can enter a standby mode to cope with chilling stress","year":2016,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Crop Yield and Soil Fertility","field":"Agricultural and Biological Sciences","cited_by":76,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Impact","funders":"Université de Liège; Institut National de la Recherche Agronomique; AgroParisTech; Fonds De La Recherche Scientifique - FNRS","keywords":"Biology","score_opus":0.025013551492556633,"score_gpt":0.22029318283239058,"score_spread":0.19527963133983395,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2525584856","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99541295,0.000028925204,0.000053316027,0.00081192225,0.0000925987,0.00014708025,0.0030431924,0.000048057937,0.00036193334],"genre_scores_gemma":[0.9990798,0.000025662213,0.0000563581,0.00029958776,0.00014278853,0.0000122436695,0.00014163341,6.997739e-7,0.00024119059],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.999095,0.000060103575,0.00013687449,0.0003116343,0.00006946606,0.00032688156],"domain_scores_gemma":[0.99953824,0.0002188249,0.000036983303,0.000062350206,0.000020153775,0.00012347293],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00007903801,0.00012596586,0.00017822531,0.0000090501435,0.00009136139,0.000016612368,0.00018762975,0.0000875309,0.00023672346],"category_scores_gemma":[0.000022128397,0.00003088529,0.000034088993,0.000051642055,0.00004860883,0.000024794334,0.000055975986,0.000049816837,0.000032117106],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0011323683,0.00008650464,0.6143631,0.000006644787,0.00002264106,0.000014474012,0.00014533357,0.000003546805,0.3614969,0.0002911112,0.0006789565,0.021758445],"study_design_scores_gemma":[0.000907297,0.0013704369,0.90627867,0.00020802088,0.00001239563,0.000066004635,0.00034176678,0.000035133893,0.05132969,0.00049681833,0.038306113,0.0006476515],"about_ca_topic_score_codex":0.00090099394,"about_ca_topic_score_gemma":0.039229915,"teacher_disagreement_score":0.31016722,"about_ca_system_score_codex":0.000018249519,"about_ca_system_score_gemma":0.000010332425,"threshold_uncertainty_score":0.97830164},"labels":[],"label_agreement":null},{"id":"W2528182419","doi":"10.1186/s12870-016-0910-5","title":"CYP79D enzymes contribute to jasmonic acid-induced formation of aldoximes and other nitrogenous volatiles in two Erythroxylum species","year":2016,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Cassava research and cyanide","field":"Agricultural and Biological Sciences","cited_by":37,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canada's Michael Smith Genome Sciences Centre; Michael Smith Health Research BC","funders":"","keywords":"Jasmonic acid; Biology; Biochemistry; Amino acid; Glucosinolate; Isoleucine; Aromatic amino acids; Botany; Leucine; Gene","score_opus":0.04277209275372882,"score_gpt":0.2640992339024439,"score_spread":0.22132714114871507,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2528182419","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99788547,0.00035239634,0.000019319947,0.0006516064,0.000033781238,0.00021630278,0.000632992,0.000018351078,0.00018978243],"genre_scores_gemma":[0.99955916,0.00008089748,0.000045256864,0.00010802272,0.000069350885,0.000015911266,0.000035738653,7.105065e-7,0.00008491944],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9990983,0.00011826103,0.0002086205,0.0001789015,0.000076033415,0.00031988398],"domain_scores_gemma":[0.999391,0.0003840365,0.000066768574,0.00004491756,0.000033963064,0.00007931553],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00023748974,0.00010037948,0.00021328178,0.000034395725,0.000049565668,0.000013339901,0.00013300622,0.000067706955,0.00013797963],"category_scores_gemma":[0.00013886575,0.0000324837,0.000038789407,0.000116851406,0.00006525059,0.00006673912,0.00007636086,0.000044375705,0.0000243608],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013233359,0.00002237757,0.07813474,0.0000038282465,0.000005322757,0.0000016899105,0.00004525783,5.1825424e-8,0.9143672,0.0015873492,0.00014729459,0.005552581],"study_design_scores_gemma":[0.0007151229,0.0006958661,0.14274813,0.000052199382,0.0000048393185,0.00004497728,0.00031044267,0.000024972936,0.84336954,0.0022767046,0.009565515,0.00019169782],"about_ca_topic_score_codex":0.00085685373,"about_ca_topic_score_gemma":0.02559316,"teacher_disagreement_score":0.07099764,"about_ca_system_score_codex":0.000024563207,"about_ca_system_score_gemma":0.00001210519,"threshold_uncertainty_score":0.9921872},"labels":[],"label_agreement":null},{"id":"W2539427592","doi":"10.1186/s12870-016-0918-x","title":"Biosensor-based spatial and developmental mapping of maize leaf glutamine at vein-level resolution in response to different nitrogen rates and uptake/assimilation durations","year":2016,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Plant nutrient uptake and metabolism","field":"Agricultural and Biological Sciences","cited_by":24,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"Natural Sciences and Engineering Research Council of Canada; Grain Farmers of Ontario; Ontario Ministry of Agriculture, Food and Rural Affairs; Government of Canada; Government of Ontario; Ministry of Agriculture, Food and Rural Affairs; University of Guelph","keywords":"Biology; Glutamine; Assimilation (phonology); Shoot; In situ; Amino acid; Nitrogen; Biophysics; Botany; Biochemistry; Chemistry","score_opus":0.05206814766775481,"score_gpt":0.23045468169973585,"score_spread":0.17838653403198104,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2539427592","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9973211,0.00013802657,0.00013685513,0.00095471024,0.00006224602,0.00023492819,0.0011212301,0.000015743093,0.000015123315],"genre_scores_gemma":[0.99870497,0.00016231721,0.0006141062,0.000073684794,0.000042757034,0.00001610973,0.00029024953,8.545064e-7,0.00009495546],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9990122,0.00017584296,0.00027341215,0.00026041167,0.00006516909,0.00021296924],"domain_scores_gemma":[0.99924517,0.00054361206,0.00008463152,0.000029902492,0.000022629125,0.00007405596],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00023234582,0.00012410767,0.00020270252,0.000067115936,0.00009559183,0.000007666668,0.000059535265,0.000109798224,0.000029141109],"category_scores_gemma":[0.0001846185,0.000047095004,0.000022045242,0.00011654222,0.00006856152,0.000038591596,0.000061750645,0.000032366657,0.000005656325],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00092751347,0.000026340487,0.258595,0.0000021305227,0.0000034479478,0.0000014163396,0.000039887134,4.7398422e-7,0.7347245,0.000054093387,0.000048933296,0.0055762543],"study_design_scores_gemma":[0.00064566545,0.0001549035,0.93797874,0.000041063864,0.000004116463,0.000018435072,0.000068848305,0.00007498419,0.051845577,0.000063441155,0.008981907,0.00012234207],"about_ca_topic_score_codex":0.00007149467,"about_ca_topic_score_gemma":0.0029797608,"teacher_disagreement_score":0.682879,"about_ca_system_score_codex":0.000037731406,"about_ca_system_score_gemma":0.000015249862,"threshold_uncertainty_score":0.19204785},"labels":[],"label_agreement":null},{"id":"W2548756385","doi":"10.1186/s12870-016-0936-8","title":"Quantitative trait variation is revealed in a novel hypomethylated population of woodland strawberry (Fragaria vesca)","year":2016,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Berry genetics and cultivation research","field":"Agricultural and Biological Sciences","cited_by":20,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan; Agriculture and Agri-Food Canada","funders":"Agriculture and Agri-Food Canada; Agricultural Research Service; China Scholarship Council; U.S. Department of Agriculture","keywords":"Biology; Fragaria; Woodland; Variation (astronomy); Population; Trait; Quantitative trait locus; Botany; Genetics; Gene; Demography","score_opus":0.07640356311894723,"score_gpt":0.2880955625149147,"score_spread":0.21169199939596745,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2548756385","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99823123,0.000040102055,0.00015517947,0.00053791417,0.000059277612,0.0001794619,0.00066282897,0.00001076632,0.00012325817],"genre_scores_gemma":[0.99896264,0.00002902836,0.0005494857,0.00003664896,0.000036589176,0.000010453959,0.00023817272,6.9490505e-7,0.0001362972],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9990892,0.00012687768,0.00028128055,0.00022404961,0.000094096555,0.00018451222],"domain_scores_gemma":[0.99929446,0.00043665548,0.00012802731,0.000038312388,0.00006432921,0.000038221995],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003203991,0.00008429172,0.0001702398,0.0000376407,0.000035764322,0.000007703157,0.000116995354,0.00015514687,0.00028827906],"category_scores_gemma":[0.00014162503,0.000029244211,0.00003810734,0.00028063264,0.00003907186,0.000044043427,0.00002515107,0.00005478185,0.000007688902],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012366382,0.00006559945,0.13268527,0.0000040126774,0.000008711105,2.3489524e-7,0.000088679524,0.0000020105456,0.85976046,0.0024489341,0.000029515986,0.0047829063],"study_design_scores_gemma":[0.00042826193,0.0003318969,0.9944198,0.000025465155,0.0000030260987,0.000001858322,0.000036303787,0.00021120855,0.0022038503,0.0018835446,0.00036654028,0.00008821536],"about_ca_topic_score_codex":0.0009593981,"about_ca_topic_score_gemma":0.0017804796,"teacher_disagreement_score":0.86173457,"about_ca_system_score_codex":0.000021266636,"about_ca_system_score_gemma":0.00001697031,"threshold_uncertainty_score":0.31564534},"labels":[],"label_agreement":null},{"id":"W2575387146","doi":"10.1186/s12870-016-0968-0","title":"EcoTILLING by sequencing reveals polymorphisms in genes encoding starch synthases that are associated with low glycemic response in rice","year":2017,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Food composition and properties","field":"Nursing","cited_by":30,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"","keywords":"Biology; Genetics; Gene; Allele; Quantitative trait locus; Glycemic; Candidate gene; Trait; DNA sequencing; Biotechnology","score_opus":0.061234323535391745,"score_gpt":0.2751871212078611,"score_spread":0.21395279767246936,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2575387146","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99745065,0.0011482963,0.000013643992,0.00052075175,0.00026950138,0.00019785314,0.00025657803,0.000057080728,0.000085659136],"genre_scores_gemma":[0.9993283,0.000055229713,0.00018506014,0.00022813464,0.00003330845,0.000020342402,0.00009471319,0.00001965124,0.00003526372],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99808735,0.00070818193,0.00027868862,0.00036614412,0.00009929423,0.0004603531],"domain_scores_gemma":[0.9983998,0.0009138995,0.00031296053,0.00029137416,0.000027494147,0.000054487962],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006880809,0.00019663172,0.00037126913,0.00023250663,0.00027183443,0.000076725795,0.00031771924,0.0001951134,0.000014185568],"category_scores_gemma":[0.00052187004,0.00015938564,0.000033821863,0.000086879016,0.00013704499,0.00015633354,0.0000632139,0.00024750468,0.000008683424],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.03997499,0.000054574706,0.35335618,0.000036469366,0.00001931358,0.00009296297,0.0007417059,0.00011447564,0.60520303,0.000005938311,0.000054340744,0.0003460191],"study_design_scores_gemma":[0.00800786,0.009178021,0.43125027,0.007223639,0.000068117726,0.000408349,0.0027894366,0.0040996885,0.533966,0.00031783342,0.00076704903,0.0019236954],"about_ca_topic_score_codex":0.001153849,"about_ca_topic_score_gemma":0.002731125,"teacher_disagreement_score":0.0778941,"about_ca_system_score_codex":0.0003027258,"about_ca_system_score_gemma":0.00006519461,"threshold_uncertainty_score":0.64995575},"labels":[],"label_agreement":null},{"id":"W2583832768","doi":"10.1186/s12870-017-0982-x","title":"UGT74S1 is the key player in controlling secoisolariciresinol diglucoside (SDG) formation in flax","year":2017,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Phytoestrogen effects and research","field":"Medicine","cited_by":26,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Prince Edward Island; Agriculture and Agri-Food Canada","funders":"Genome Prairie; Genome Canada","keywords":"Biology; Gene duplication; Gene; Heterologous expression; Genome; Genetics; Functional divergence; Neofunctionalization; Biochemistry; Gene family; Recombinant DNA","score_opus":0.04883605865317903,"score_gpt":0.324118878538085,"score_spread":0.275282819884906,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2583832768","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9955307,0.0004413807,0.00016876806,0.001356376,0.00012828731,0.0005848844,0.00004196872,0.000012301211,0.0017353054],"genre_scores_gemma":[0.99907124,0.00012927566,0.000061687104,0.0004030233,0.00012697781,0.000040857612,0.000054921635,0.000007796576,0.00010419706],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99895734,0.00013824149,0.00024408939,0.0001855673,0.000095264346,0.00037952475],"domain_scores_gemma":[0.99913967,0.000329029,0.00010238685,0.00035149793,0.000024657102,0.000052770843],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00053796684,0.00011045779,0.00028946428,0.00014547398,0.00015860467,0.00003450596,0.00021693329,0.00016430227,0.000027165903],"category_scores_gemma":[0.00030264416,0.000061511164,0.00005548222,0.000054713437,0.0001000839,0.00009088668,0.00007512239,0.00034280197,0.000053176827],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0017553752,0.0001933289,0.75938475,0.00016184676,0.00005529253,0.00024089197,0.0010187655,0.000031127405,0.23097555,0.001138199,0.0010028121,0.004042026],"study_design_scores_gemma":[0.0076632737,0.00059910736,0.88593066,0.00031549192,0.00003115009,0.0003717,0.00017698223,0.029565182,0.06716506,0.00082070584,0.0071140444,0.00024662266],"about_ca_topic_score_codex":0.0007254027,"about_ca_topic_score_gemma":0.0027495464,"teacher_disagreement_score":0.16381049,"about_ca_system_score_codex":0.000057384143,"about_ca_system_score_gemma":0.00007813106,"threshold_uncertainty_score":0.25083524},"labels":[],"label_agreement":null},{"id":"W2584437556","doi":"10.1186/s12870-017-0983-9","title":"Conservation and diversification of the miR166 family in soybean and potential roles of newly identified miR166s","year":2017,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Plant Molecular Biology Research","field":"Agricultural and Biological Sciences","cited_by":67,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Agriculture and Agri-Food Canada; Western University","funders":"National Natural Science Foundation of China","keywords":"Biology; Diversification (marketing strategy); Biotechnology; Marketing","score_opus":0.04342203610878306,"score_gpt":0.2518547101686529,"score_spread":0.20843267405986984,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2584437556","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99869347,0.00016354528,0.000004734574,0.0006499115,0.000053152748,0.0001466666,0.00022835405,0.0000032035202,0.000056980505],"genre_scores_gemma":[0.9996842,0.000105854924,0.000037031055,0.000030438985,0.000013322804,0.000002550659,0.000098298886,2.849385e-7,0.000028032362],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99935716,0.00015349203,0.00014939423,0.00016997405,0.000053690153,0.00011630118],"domain_scores_gemma":[0.9995789,0.00012157982,0.00017104247,0.00007578026,0.000032266307,0.000020408766],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00027161534,0.000059016376,0.0001349431,0.000016136573,0.00013128479,0.000015016027,0.00025974703,0.0001172238,0.000003957516],"category_scores_gemma":[0.0001313094,0.000022325441,0.000025172607,0.00003829989,0.00039095205,0.000039049573,0.00018480349,0.00006017766,7.43745e-7],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000048121874,0.000009458304,0.41899335,0.000004459456,0.0000037712284,5.25743e-7,0.000012161732,7.072574e-8,0.5798492,0.00023778333,0.000032099517,0.00080900796],"study_design_scores_gemma":[0.00019921786,0.000057404082,0.97835803,0.000014836358,0.0000056239687,0.000009944354,0.000092338785,0.00009110654,0.020557394,0.00043379088,0.00013669323,0.000043626926],"about_ca_topic_score_codex":0.0012778622,"about_ca_topic_score_gemma":0.005374883,"teacher_disagreement_score":0.5593647,"about_ca_system_score_codex":0.0000028991458,"about_ca_system_score_gemma":0.000009615498,"threshold_uncertainty_score":0.29993108},"labels":[],"label_agreement":null},{"id":"W2588654803","doi":"10.1186/s12870-017-0993-7","title":"Highly predictive SNP markers for efficient selection of the wheat leaf rust resistance gene Lr16","year":2017,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Wheat and Barley Genetics and Pathology","field":"Agricultural and Biological Sciences","cited_by":91,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Global Institute for Water Security; University of Saskatchewan; Agriculture and Agri-Food Canada","funders":"National Research Council Canada; Manitoba Agriculture, Food and Rural Development; Genome Prairie; Agriculture and Agri-Food Canada; Western Grains Research Foundation; Ministry of Agriculture - Saskatchewan; Genome Canada","keywords":"Biology; Single-nucleotide polymorphism; Genetics; SNP; Locus (genetics); Wheat leaf rust; Marker-assisted selection; Genetic marker; SNP array; Variants of PCR; Gene; SNP genotyping; Population; Candidate gene; Rust (programming language); Allele; Genotype","score_opus":0.028464792231465617,"score_gpt":0.23309827384363693,"score_spread":0.20463348161217132,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2588654803","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9965785,0.0001591818,0.00008370607,0.0006783137,0.0005387766,0.00031310253,0.0008300211,0.000013124183,0.0008052832],"genre_scores_gemma":[0.9985684,0.000053162665,0.0002744462,0.000054684384,0.00026133048,0.000027120941,0.000089826164,7.7162287e-7,0.0006702611],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99923295,0.000083927,0.00015994001,0.00024291156,0.000052722073,0.0002275338],"domain_scores_gemma":[0.9994866,0.00016346546,0.00016088074,0.00009736662,0.000058243597,0.000033398006],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00021857837,0.00009903402,0.00016457625,0.0000070862457,0.00048238537,0.00001711048,0.0003357026,0.00014986788,0.000026032412],"category_scores_gemma":[0.00006961659,0.000032164953,0.00009667272,0.00004294001,0.000186088,0.000012249771,0.00007110411,0.000059830232,0.0000023793302],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005587259,0.00004916858,0.044965696,0.0000118915605,0.00001601941,3.8989066e-7,0.000022378475,0.000018708626,0.94931626,0.0010546498,0.001961414,0.0020246936],"study_design_scores_gemma":[0.00045505574,0.0008358222,0.79122585,0.000030726584,0.00003900446,0.00001725039,0.00005198868,0.0003901322,0.16423711,0.0007533802,0.041763693,0.00019997166],"about_ca_topic_score_codex":0.00009337805,"about_ca_topic_score_gemma":0.0024137297,"teacher_disagreement_score":0.7850792,"about_ca_system_score_codex":0.0000114184795,"about_ca_system_score_gemma":0.000015243651,"threshold_uncertainty_score":0.3710167},"labels":[],"label_agreement":null},{"id":"W2589372186","doi":"10.1186/s12870-017-0995-5","title":"Identification and characterization of an efficient acyl-CoA: diacylglycerol acyltransferase 1 (DGAT1) gene from the microalga Chlorella ellipsoidea","year":2017,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Lipid metabolism and biosynthesis","field":"Biochemistry, Genetics and Molecular Biology","cited_by":71,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Institute of Genetics and Developmental Biology, Chinese Academy of Sciences; Chinese Academy of Sciences; Institute of Genetics; Institute of Oceanology, Chinese Academy of Sciences; National Natural Science Foundation of China","keywords":"Biology; Diacylglycerol kinase; Biochemistry; Acyltransferase; Arabidopsis thaliana; Chlorella; Complementary DNA; Yeast; Open reading frame; Arabidopsis; Wild type; Mutant; Enzyme; Botany; Gene; Food science; Peptide sequence; Algae","score_opus":0.012693233795601088,"score_gpt":0.23170431665102542,"score_spread":0.21901108285542434,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2589372186","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99655193,0.00032067255,0.0011061818,0.00012560713,0.0003288504,0.00022930815,0.0013212541,0.000008141214,0.000008042834],"genre_scores_gemma":[0.9959777,0.0005381713,0.00022285192,0.00009035588,0.0004921777,0.000016213906,0.0026079982,0.000013211181,0.000041312236],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99893755,0.00013255615,0.00028064437,0.00040382807,0.000060782702,0.0001846312],"domain_scores_gemma":[0.99890435,0.000040535328,0.00023440018,0.0007092416,0.000050026698,0.00006144143],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00026647767,0.00015768294,0.00019836953,0.000025179294,0.0002607256,0.000051596795,0.00041036087,0.00020082947,0.0000077856375],"category_scores_gemma":[0.00009258383,0.00010808786,0.000055326418,0.000020258576,0.00023265673,0.0000071302616,0.00010056871,0.000055989432,0.0000070042315],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002139488,0.000062643805,0.012366907,0.000009389755,0.00003436807,4.3524224e-7,0.00006684401,0.0000015050769,0.9832488,0.00004574047,0.000011086813,0.0039383676],"study_design_scores_gemma":[0.00035521857,0.00004802249,0.15429316,0.0000064567917,0.000040662693,0.000006486129,0.000013412589,0.0001161725,0.8388626,0.000010438996,0.006127612,0.00011971803],"about_ca_topic_score_codex":0.00010165042,"about_ca_topic_score_gemma":0.00012759017,"teacher_disagreement_score":0.14438614,"about_ca_system_score_codex":0.000003140432,"about_ca_system_score_gemma":0.000045380482,"threshold_uncertainty_score":0.4407695},"labels":[],"label_agreement":null},{"id":"W2604386700","doi":"10.1186/s12870-017-1022-6","title":"Acetolactate synthase regulatory subunits play divergent and overlapping roles in branched-chain amino acid synthesis and Arabidopsis development","year":2017,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Plant nutrient uptake and metabolism","field":"Agricultural and Biological Sciences","cited_by":34,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Western University; University of Windsor","funders":"","keywords":"Biology; Arabidopsis; Valine; Amino acid; Biochemistry; Isoleucine; Acetolactate synthase; Arabidopsis thaliana; ATP synthase; Amino acid synthesis; Genetics; Protein subunit; Biosynthesis; Leucine; Gene; Mutant","score_opus":0.032509769090301094,"score_gpt":0.22079674736254154,"score_spread":0.18828697827224045,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2604386700","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99684995,0.0021657418,0.0000023920784,0.00021780693,0.00015447733,0.00017546391,0.00028526018,0.000029043666,0.000119865814],"genre_scores_gemma":[0.99713624,0.0023453624,0.00014031654,0.000085703745,0.000087526874,0.000028613547,0.00009158288,0.0000013230266,0.00008335376],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99868894,0.00012424086,0.0002641737,0.00043639864,0.00009074954,0.00039552216],"domain_scores_gemma":[0.9992076,0.00035031134,0.00018216886,0.00009994135,0.00001723183,0.00014275675],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004389833,0.00021226938,0.00036618038,0.00004163243,0.00044909242,0.000068638,0.00024823268,0.0001847775,0.0000273514],"category_scores_gemma":[0.00023979887,0.00009540313,0.00003417494,0.000049957074,0.00015158538,0.00013788203,0.00021938632,0.00011277273,0.00000907423],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00016581982,0.000059724996,0.44070303,0.000015160493,0.000025896052,0.000025486319,0.00023959286,3.892448e-7,0.45742506,0.00047658596,0.00007392643,0.10078933],"study_design_scores_gemma":[0.00026770026,0.000032516495,0.9437097,0.00007808539,0.000014569094,0.00004109343,0.00013524058,0.000027127053,0.029699959,0.00008992401,0.025651967,0.0002521489],"about_ca_topic_score_codex":0.00016500236,"about_ca_topic_score_gemma":0.0033945367,"teacher_disagreement_score":0.50300664,"about_ca_system_score_codex":0.000016639313,"about_ca_system_score_gemma":0.000017650007,"threshold_uncertainty_score":0.38904268},"labels":[],"label_agreement":null},{"id":"W2608801741","doi":"10.1186/s12870-017-1020-8","title":"An integrated RNAseq-1H NMR metabolomics approach to understand soybean primary metabolism regulation in response to Rhizoctonia foliar blight disease","year":2017,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Metabolomics and Mass Spectrometry Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":81,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"Natural Sciences and Engineering Research Council of Canada; University of California, Davis; Canadian Network for Research and Innovation in Machining Technology, Natural Sciences and Engineering Research Council of Canada; National Science Foundation","keywords":"Metabolomics; Biology; Transcriptome; Metabolome; Rhizoctonia solani; Secondary metabolism; Computational biology; Metabolic pathway; Metabolism; Botany; Genetics; Biochemistry; Gene; Bioinformatics; Gene expression","score_opus":0.02414579083080662,"score_gpt":0.27023841378857033,"score_spread":0.2460926229577637,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2608801741","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97463804,0.0009600484,0.021143133,0.0005416683,0.00035310767,0.000704811,0.0009528837,0.000028676293,0.00067763816],"genre_scores_gemma":[0.9833575,0.00022139859,0.013611309,0.0006237359,0.00025563917,0.000070096416,0.001208433,0.00003965398,0.00061223254],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9974949,0.00043820633,0.0004244278,0.000938283,0.0001289276,0.0005752785],"domain_scores_gemma":[0.99808,0.00004760691,0.00020234754,0.0011863894,0.00009584369,0.00038779606],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0009954765,0.00037420235,0.0005800244,0.00035293936,0.00029825472,0.00009923261,0.00070265925,0.0002639443,0.000010102132],"category_scores_gemma":[0.000687798,0.00031681216,0.00011993191,0.00017858717,0.00014541588,0.000018338927,0.00034567036,0.00015443603,0.000015064758],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.008451902,0.00028149917,0.0083096875,0.00002157278,0.00012441754,0.000007258611,0.00014906714,0.00014821383,0.9690699,0.011566762,0.0014599073,0.00040980612],"study_design_scores_gemma":[0.004099116,0.0009631009,0.71611345,0.000036170302,0.00022930956,0.00003296636,0.0005251433,0.0006087666,0.09488153,0.0026123119,0.1782986,0.0015995242],"about_ca_topic_score_codex":0.00012774114,"about_ca_topic_score_gemma":0.0006283566,"teacher_disagreement_score":0.87418836,"about_ca_system_score_codex":0.000065648,"about_ca_system_score_gemma":0.0002445289,"threshold_uncertainty_score":0.9999284},"labels":[],"label_agreement":null},{"id":"W2617448855","doi":"10.1186/s12870-017-1040-4","title":"The development and use of a molecular model for soybean maturity groups","year":2017,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Soybean genetics and cultivation","field":"Agricultural and Biological Sciences","cited_by":69,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"United Soybean Board; U.S. Department of Agriculture","keywords":"Biology; Germplasm; Cultivar; Maturity (psychological); Growing season; Biotechnology; Crop; Genetic diversity; Allele; Gene pool; Selection (genetic algorithm); Adaptation (eye); Yield (engineering); Agronomy; Gene; Genetics; Population; Demography","score_opus":0.07401471062474954,"score_gpt":0.24876711458067496,"score_spread":0.17475240395592542,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2617448855","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99908584,0.000060130857,0.00041370222,0.00016093825,0.00003378665,0.00013392002,0.00008374154,0.000005020067,0.000022944481],"genre_scores_gemma":[0.9974215,0.000017610342,0.0023680201,0.000033070595,0.000019933635,0.000015003432,0.00007217248,3.1075646e-7,0.000052353284],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99964195,0.000015855838,0.00009965478,0.00010970481,0.000027331065,0.00010552224],"domain_scores_gemma":[0.9996764,0.00013853956,0.000089836765,0.00004842691,0.000025689242,0.00002108936],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012404735,0.000050242073,0.00006820779,0.0000021110743,0.00032639137,0.000038069393,0.00013096095,0.000054356417,9.2926217e-7],"category_scores_gemma":[0.000076524004,0.000015307245,0.000021732048,0.00000805551,0.00006712687,0.00001926749,0.000057650286,0.00002057987,3.9253047e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014087181,0.00003800487,0.060374953,0.000011387144,0.00002320935,2.8353116e-7,0.00016533336,0.000009591125,0.86555123,0.023149164,0.00022163092,0.050314344],"study_design_scores_gemma":[0.00036833843,0.00020789466,0.8614513,0.000018310433,0.000015106371,0.0000053336653,0.00014290273,0.020051718,0.08603578,0.01565709,0.015781943,0.00026424672],"about_ca_topic_score_codex":0.000022242333,"about_ca_topic_score_gemma":0.0008358864,"teacher_disagreement_score":0.8010764,"about_ca_system_score_codex":0.0000025871386,"about_ca_system_score_gemma":0.0000061005126,"threshold_uncertainty_score":0.25103715},"labels":[],"label_agreement":null},{"id":"W2618180311","doi":"10.1186/s12870-017-1037-z","title":"Proanthocyanidin accumulation and transcriptional responses in the seed coat of cranberry beans (Phaseolus vulgaris L.) with different susceptibility to postharvest darkening","year":2017,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Postharvest Quality and Shelf Life Management","field":"Agricultural and Biological Sciences","cited_by":49,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Windsor; University of Guelph","funders":"Pulse Canada; Hospital for Sick Children; Ontario Ministry of Research and Innovation; Natural Sciences and Engineering Research Council of Canada; Ontario Ministry of Research, Innovation and Science; Ontario Ministry of Agriculture, Food and Rural Affairs","keywords":"Proanthocyanidin; Phaseolus; Biology; Cyanidin; Postharvest; Transcriptome; Botany; Catechin; Anthocyanin; Food science; Biochemistry; Gene; Polyphenol; Gene expression; Antioxidant","score_opus":0.10701864725650691,"score_gpt":0.3101664031638101,"score_spread":0.20314775590730322,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2618180311","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99641615,0.000035668243,0.000063831365,0.002302843,0.000043386823,0.00047868022,0.00050654187,0.000013227228,0.00013965162],"genre_scores_gemma":[0.9993549,0.00001516609,0.00006176536,0.00020427283,0.00004592147,0.000021740989,0.00022738564,7.2477616e-7,0.000068099514],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9986052,0.00048432618,0.00025687882,0.00030573903,0.00013250647,0.00021537454],"domain_scores_gemma":[0.9991323,0.00052390725,0.00013382817,0.00013103859,0.00002639379,0.000052536292],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00092561543,0.00013574185,0.00022708795,0.000023848948,0.00029256067,0.000076710705,0.0003362795,0.00008005347,0.000023163913],"category_scores_gemma":[0.00016761389,0.000045449724,0.000038675676,0.00006210055,0.0001936384,0.000112638,0.00007125361,0.000098525816,0.000001386005],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0014535681,0.00015757658,0.84099555,0.000020863414,0.000012093526,0.000003504291,0.00053927954,0.0000065580593,0.15279621,0.0030897,0.00001956561,0.0009055386],"study_design_scores_gemma":[0.0003545046,0.00054263725,0.99632543,0.000033277393,0.00001270365,0.00001182293,0.0004633546,0.00006399718,0.0010248757,0.00022633061,0.0008225985,0.00011848937],"about_ca_topic_score_codex":0.0017482842,"about_ca_topic_score_gemma":0.08558776,"teacher_disagreement_score":0.15532987,"about_ca_system_score_codex":0.000014726731,"about_ca_system_score_gemma":0.000010097233,"threshold_uncertainty_score":0.93109787},"labels":[],"label_agreement":null},{"id":"W2622014095","doi":"10.1186/s12870-017-1039-x","title":"CottonFGD: an integrated functional genomics database for cotton","year":2017,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Research in Cotton Cultivation","field":"Agricultural and Biological Sciences","cited_by":441,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Biotechnology Research Institute","funders":"Chinese Academy of Agricultural Sciences; Ministry of Agriculture of the People's Republic of China; Institute of Crop Sciences, Chinese Academy of Agricultural Sciences; Southwest University; Ministry of Science and Technology of the People's Republic of China","keywords":"Biology; Genomics; Functional genomics; Database; Genome; Computational biology; Computer science; Gene; Genetics","score_opus":0.19876220348427803,"score_gpt":0.33284080365010993,"score_spread":0.1340786001658319,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2622014095","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99343884,0.000028046712,0.0011063382,0.00059648865,0.0004059841,0.00039369753,0.0036910959,0.00005604264,0.0002834834],"genre_scores_gemma":[0.97451675,0.00005947434,0.0027173832,0.00021442567,0.0008612446,0.00010544558,0.020899976,0.0000018438703,0.00062344695],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.99897105,0.00010057593,0.00017356373,0.00036055897,0.000086250504,0.00030801122],"domain_scores_gemma":[0.9990392,0.0004265033,0.00014329197,0.00015514494,0.00012326769,0.000112605376],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004926095,0.00011986793,0.00014788777,0.000013661262,0.0006372488,0.00011874526,0.0004904564,0.00014293077,0.00027505163],"category_scores_gemma":[0.0005863756,0.00004488723,0.000052570053,0.000037976555,0.00015433611,0.00021185551,0.000104271414,0.000110017056,0.000042525036],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00039813085,0.00007648328,0.029497119,0.0000069277025,0.000012083031,0.0000012133437,0.00000968194,0.0000041376597,0.9413316,0.004335447,0.005421445,0.018905686],"study_design_scores_gemma":[0.00073663844,0.00094032875,0.2936427,0.0000189921,0.000011519152,0.000027894634,0.00017685897,0.0043261983,0.032463938,0.0018181405,0.66546834,0.00036844003],"about_ca_topic_score_codex":0.0005715871,"about_ca_topic_score_gemma":0.004188395,"teacher_disagreement_score":0.9088677,"about_ca_system_score_codex":0.000038936476,"about_ca_system_score_gemma":0.000039976607,"threshold_uncertainty_score":0.49012667},"labels":[],"label_agreement":null},{"id":"W2626725884","doi":"10.1186/s12870-017-1051-1","title":"Brief temperature stress during reproductive stages alters meiotic recombination and somatic mutation rates in the progeny of Arabidopsis","year":2017,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"DNA Repair Mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":30,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Weizmann Institute of Science; University of California, San Diego; Department of Biotechnology, Ministry of Science and Technology, India; University of Lethbridge","keywords":"Biology; Arabidopsis; Meiosis; Somatic cell; Recombination; Homologous recombination; Genetics; Mutation; Mutant; Gene","score_opus":0.012975466780209687,"score_gpt":0.25996835132267127,"score_spread":0.24699288454246157,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2626725884","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99905765,0.0002502862,0.000011726101,0.00014256786,0.00011222366,0.00030783363,0.00006361929,0.0000052763467,0.00004882652],"genre_scores_gemma":[0.9992244,0.000078974976,0.0003171474,0.00001885726,0.000052847896,0.000030539602,0.00020568576,0.0000067550845,0.00006479],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.999189,0.00017032685,0.00016185784,0.0003058364,0.000045484496,0.00012747307],"domain_scores_gemma":[0.99934715,0.000030283503,0.00019085754,0.00038031128,0.000036338897,0.000015049813],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002941871,0.0000976983,0.0001314286,0.000039136365,0.00009845571,0.000025244535,0.00018096378,0.000119861914,0.000001680408],"category_scores_gemma":[0.00029371778,0.00007085784,0.000026313573,0.000024421466,0.000098524746,0.000008132493,0.00006451681,0.000061806044,4.2966232e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000771737,0.00004346217,0.0679894,0.000086590786,0.000021941732,0.0000042964507,0.00020985727,0.000010692518,0.9309905,0.00037147067,0.0000104310775,0.00018417605],"study_design_scores_gemma":[0.00043048378,0.00016779879,0.21362758,0.000031720705,0.0000118352555,0.000042635533,0.00021925566,0.000027579645,0.7846993,0.0006464629,0.000012783549,0.00008251615],"about_ca_topic_score_codex":0.000047070433,"about_ca_topic_score_gemma":0.0001834427,"teacher_disagreement_score":0.14629117,"about_ca_system_score_codex":0.000007319765,"about_ca_system_score_gemma":0.00002473451,"threshold_uncertainty_score":0.28894988},"labels":[],"label_agreement":null},{"id":"W2663412793","doi":"10.1186/s12870-017-1056-9","title":"Prediction and analysis of three gene families related to leaf rust (Puccinia triticina) resistance in wheat (Triticum aestivum L.)","year":2017,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Wheat and Barley Genetics and Pathology","field":"Agricultural and Biological Sciences","cited_by":28,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Alberta Ministry of Agriculture and Forestry; Agriculture Food and Rural Development; University of Alberta","funders":"Alberta Agriculture and Forestry","keywords":"Biology; Gene; Genetics; Quantitative trait locus; Single-nucleotide polymorphism; Plant disease resistance; Stem rust; Genome; Rust (programming language); Wheat leaf rust; Genotype; Virulence","score_opus":0.035376835976488,"score_gpt":0.2421207292935915,"score_spread":0.2067438933171035,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2663412793","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99700344,0.0005960218,0.000019864934,0.00069696986,0.00011687615,0.00015021922,0.00088384486,0.0000135665805,0.00051917485],"genre_scores_gemma":[0.99883133,0.00033694814,0.0003400213,0.00004408473,0.0000434209,0.000011036721,0.00028404535,7.023164e-7,0.000108393084],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9990383,0.00007892304,0.00027240178,0.00032097733,0.00005432036,0.00023508217],"domain_scores_gemma":[0.99952394,0.00016558162,0.000092898,0.00011417123,0.00003934618,0.00006403874],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00025727495,0.00011480573,0.0003686989,0.00007583211,0.00017392143,0.000016384032,0.00019561722,0.00019365204,0.000026596987],"category_scores_gemma":[0.00010080076,0.000051371582,0.000060561706,0.00022666027,0.00015053223,0.000031284915,0.000078394405,0.00007834186,0.0000028300842],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015974711,0.000035016947,0.7037301,0.0000067841333,0.000031861615,0.000006626887,0.000042221993,0.0000050842655,0.29321074,0.0007672127,0.000055016106,0.0019495867],"study_design_scores_gemma":[0.00023256737,0.0004023467,0.99438035,0.00001880462,0.000084591506,0.000006417196,0.00004239267,0.00010952948,0.0028210972,0.0006633109,0.0011330044,0.000105579275],"about_ca_topic_score_codex":0.00041506882,"about_ca_topic_score_gemma":0.04196495,"teacher_disagreement_score":0.29065025,"about_ca_system_score_codex":0.000008158929,"about_ca_system_score_gemma":0.0000076070887,"threshold_uncertainty_score":0.9755167},"labels":[],"label_agreement":null},{"id":"W2685221783","doi":"10.1186/s12870-017-1052-0","title":"Molecular cloning, structure, phylogeny and expression analysis of the invertase gene family in sugarcane","year":2017,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Plant nutrient uptake and metabolism","field":"Agricultural and Biological Sciences","cited_by":57,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ministry of Agriculture","funders":"National High-tech Research and Development Program; Fujian Agriculture and Forestry University; Ministry of Science and Technology of the People's Republic of China; National Natural Science Foundation of China","keywords":"Invertase; Biology; Gene family; Gene; Gene duplication; Functional divergence; Phylogenetics; Sucrose synthase; Genetics; Sucrose; Complementary DNA; Fructose; Genome; Abiotic stress; Biochemistry","score_opus":0.02409699531779855,"score_gpt":0.2298335159409173,"score_spread":0.20573652062311876,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2685221783","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9972575,0.0012101121,0.0000016495251,0.000052724314,0.00010595296,0.00009604455,0.0011945722,0.0000050774197,0.00007640716],"genre_scores_gemma":[0.99904907,0.0004133827,0.000052268,0.00013420357,0.000037327667,0.000002993911,0.00029412177,3.999512e-7,0.000016226142],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99924624,0.00011008394,0.00016642363,0.0002289659,0.0000667518,0.00018154827],"domain_scores_gemma":[0.9995498,0.00008404245,0.00017715513,0.00013040383,0.00001481428,0.000043784687],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00011959836,0.00009984083,0.00026387195,0.000031071435,0.0001394118,0.000016067563,0.00036080775,0.000120467324,0.00001632729],"category_scores_gemma":[0.000072217255,0.000031222397,0.00007529243,0.00014271984,0.000121152945,0.00002945003,0.00015789234,0.000077009856,4.4745974e-7],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000023870285,0.000010414352,0.3112315,0.0000010078934,0.00001884703,0.000002548764,0.000011767087,0.000004004086,0.687162,0.0003081261,0.00003205485,0.0011938405],"study_design_scores_gemma":[0.00013673947,0.000023671806,0.81390554,0.000007368189,0.000057627338,0.0000031424124,0.00001617757,0.000084689826,0.18124038,0.00025295635,0.0042001284,0.00007156021],"about_ca_topic_score_codex":0.001102055,"about_ca_topic_score_gemma":0.0041723973,"teacher_disagreement_score":0.5059216,"about_ca_system_score_codex":0.0000035429969,"about_ca_system_score_gemma":0.000008008026,"threshold_uncertainty_score":0.23282957},"labels":[],"label_agreement":null},{"id":"W2734922882","doi":"10.1186/s12870-017-1073-8","title":"Characterization of four rice UEV1 genes required for Lys63-linked polyubiquitination and distinct functions","year":2017,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Ubiquitin and proteasome pathways","field":"Biochemistry, Genetics and Molecular Biology","cited_by":15,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"National Natural Science Foundation of China","keywords":"Biology; Ubiquitin; Subcellular localization; Gene; Saccharomyces cerevisiae; Yeast; Prenylation; Protein subunit; Mutant; Cell biology; Function (biology); Ring finger; Caenorhabditis elegans; Genetics; Biochemistry; Enzyme","score_opus":0.045252787426817355,"score_gpt":0.27289454340609165,"score_spread":0.2276417559792743,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2734922882","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9811787,0.0001313818,0.016170578,0.0001201385,0.00024422212,0.00033164743,0.0015127735,0.0000116842975,0.00029887175],"genre_scores_gemma":[0.9950692,0.000115693096,0.0007579291,0.000046562633,0.00033392545,0.00007371961,0.0031371773,0.000011733799,0.00045405186],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99928844,0.000056557346,0.00019275027,0.0002644803,0.000033365337,0.00016443306],"domain_scores_gemma":[0.9992867,0.00003396548,0.000279333,0.00027034423,0.00008710875,0.000042533095],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00019643844,0.00011254317,0.00015538516,0.00003816688,0.00024532047,0.000022018408,0.00014169412,0.0001849486,0.0000059807585],"category_scores_gemma":[0.0002430987,0.00010178403,0.00005188941,0.000016188586,0.00012273362,0.000007324664,0.000086309985,0.000030731328,0.000002249268],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00020359036,0.000023799521,0.014027492,0.000055555305,0.000022109805,2.439356e-7,0.000013150176,1.429325e-7,0.982125,0.0005128753,0.000044213302,0.0029718305],"study_design_scores_gemma":[0.0010035759,0.0006110693,0.14324337,0.000021201155,0.000042072214,0.000038389688,0.000018457766,0.00018396879,0.8316244,0.0002863753,0.022707837,0.0002193186],"about_ca_topic_score_codex":0.000022030177,"about_ca_topic_score_gemma":0.00008172317,"teacher_disagreement_score":0.15050063,"about_ca_system_score_codex":0.0000047799203,"about_ca_system_score_gemma":0.000047163066,"threshold_uncertainty_score":0.41506326},"labels":[],"label_agreement":null},{"id":"W2737347245","doi":"10.1186/s12870-017-1079-2","title":"Identification and characterization of suppressor mutants of stop1","year":2017,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Aluminum toxicity and tolerance in plants and animals","field":"Agricultural and Biological Sciences","cited_by":14,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Global Institute for Water Security; University of Saskatchewan","funders":"China Scholarship Council; U.S. Department of Agriculture","keywords":"Biology; Identification (biology); Computational biology; Mutant; Suppressor; Genetics; Gene; Botany","score_opus":0.03716375081797451,"score_gpt":0.24733060831104314,"score_spread":0.21016685749306863,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2737347245","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99852365,0.000023521023,0.000009485403,0.000087520835,0.00007535074,0.000060520466,0.0011325146,0.000004790661,0.000082623446],"genre_scores_gemma":[0.99957377,0.00011345647,0.000011496686,0.000010176041,0.000052323463,0.0000018585528,0.00017138424,2.143356e-7,0.00006533734],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9995988,0.000024876983,0.00015869392,0.000110233355,0.000032736192,0.00007464437],"domain_scores_gemma":[0.9995927,0.00005536232,0.00026763533,0.000044484015,0.000022459139,0.000017361215],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00010564257,0.000046688187,0.00013255939,0.0000056321796,0.00011138351,0.000013816543,0.00013432755,0.000068339075,0.00004552799],"category_scores_gemma":[0.000032678192,0.000018312754,0.000019898876,0.000014080859,0.000114669616,0.00007149927,0.000032735956,0.000023171715,0.0000016639666],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000034999935,0.000020177336,0.08497655,0.000009354441,0.0000033983526,2.4167161e-7,0.000018505132,2.4703125e-8,0.90851533,0.00067124533,0.0000041155577,0.0057460493],"study_design_scores_gemma":[0.000057288635,0.00006666381,0.7686917,0.000015085207,0.0000039207707,0.000004409826,0.000014886886,0.00004783418,0.23034473,0.00017712807,0.0005372413,0.000039122784],"about_ca_topic_score_codex":0.000075897624,"about_ca_topic_score_gemma":0.00013205342,"teacher_disagreement_score":0.68371516,"about_ca_system_score_codex":9.592442e-7,"about_ca_system_score_gemma":0.0000025540885,"threshold_uncertainty_score":0.08566832},"labels":[],"label_agreement":null},{"id":"W2754284600","doi":"10.1186/s12870-017-1104-5","title":"Seed maturation associated transcriptional programs and regulatory networks underlying genotypic difference in seed dormancy and size/weight in wheat (Triticum aestivum L.)","year":2017,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Seed Germination and Physiology","field":"Agricultural and Biological Sciences","cited_by":37,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Agriculture and Agri-Food Canada; University of Manitoba","funders":"Agriculture and Agri-Food Canada; Natural Sciences and Engineering Research Council of Canada; Western Grains Research Foundation; Manitoba Agriculture, Food and Rural Development","keywords":"Biology; Dormancy; Abscisic acid; Seed dormancy; Endosperm; Phenotype; Gibberellin; Genotype; Transcription factor; Gene; Embryo; Genetics; Germination; Cell biology; Botany","score_opus":0.03983134820697329,"score_gpt":0.24529162065313778,"score_spread":0.2054602724461645,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2754284600","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99868625,0.00038687172,0.000008835232,0.0004499843,0.00014293361,0.0002236585,0.000025065116,0.000024831703,0.000051576535],"genre_scores_gemma":[0.9992851,0.00013818077,0.00003462973,0.00009005627,0.000062373976,0.00002285387,0.0003049413,9.330149e-7,0.000060942766],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9990232,0.00017339113,0.00020682783,0.00028671033,0.000047684603,0.00026219172],"domain_scores_gemma":[0.9994895,0.00028120162,0.00010633459,0.000047650392,0.000023150276,0.000052200892],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00019580481,0.00012934915,0.00021875266,0.000018376446,0.00019829992,0.00004250946,0.00012022056,0.00026673474,0.000012390421],"category_scores_gemma":[0.00007162439,0.00006156793,0.000021845835,0.00007405622,0.00016031762,0.00009919415,0.000037462974,0.00015770504,0.0000011425915],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013033132,0.00006270421,0.74788904,0.000008083234,0.0000048168226,0.000003046529,0.00006540719,0.0000032739715,0.24451858,0.00093858875,0.0000030930555,0.006373054],"study_design_scores_gemma":[0.00050210377,0.00013936944,0.9952368,0.00004447735,0.000004140133,0.000012250327,0.000044228967,0.0023047223,0.00006206182,0.0014462929,0.0000671733,0.000136378],"about_ca_topic_score_codex":0.00028461133,"about_ca_topic_score_gemma":0.0063752774,"teacher_disagreement_score":0.24734779,"about_ca_system_score_codex":0.000023326957,"about_ca_system_score_gemma":0.000011287035,"threshold_uncertainty_score":0.35575545},"labels":[],"label_agreement":null},{"id":"W2765368201","doi":"10.1186/s12870-017-1140-1","title":"Assessment of genetic diversity and yield performance in Jordanian barley (Hordeum vulgare L.) landraces grown under Rainfed conditions","year":2017,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Wheat and Barley Genetics and Pathology","field":"Agricultural and Biological Sciences","cited_by":73,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"University of Jordan; International Development Research Centre; Deanship of Academic Research, University of Jordan","keywords":"Biology; Hordeum vulgare; Agronomy; Cultivar; Abiotic component; Genetic diversity; Crop; Yield (engineering); Germplasm; Crop yield; Accession; Poaceae; Population","score_opus":0.04353669074544136,"score_gpt":0.254344698717589,"score_spread":0.21080800797214766,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2765368201","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9978305,0.00012683848,0.0000054657585,0.00026448924,0.00011058649,0.00007984228,0.0002207418,0.000007361379,0.0013541484],"genre_scores_gemma":[0.99915123,0.00043645056,0.000107982756,0.000061512095,0.000056556953,0.000004635664,0.000096813994,4.4226078e-7,0.00008437285],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99936825,0.00005838964,0.00014298987,0.00019956207,0.000044230004,0.00018657466],"domain_scores_gemma":[0.9996368,0.00012612567,0.00009808824,0.000071343835,0.0000213192,0.00004626822],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001448183,0.00009166215,0.00018666867,0.000021227179,0.000582754,0.000017244498,0.00021350564,0.00013337657,0.00012931295],"category_scores_gemma":[0.000017933715,0.000039751816,0.000030302339,0.00003448268,0.00016922643,0.00003684508,0.00031532833,0.00008821259,0.0000017594465],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000011836615,0.000028411536,0.94684225,0.0000067293086,0.0000049101977,0.000003035136,0.000029851268,0.000003536903,0.051051732,0.00054876134,0.000024957764,0.001443974],"study_design_scores_gemma":[0.00017532318,0.0003028121,0.9979975,0.000014752144,0.000007873854,0.00001740084,0.000063086394,0.00009179813,0.0003920439,0.00042523502,0.00041375274,0.00009838912],"about_ca_topic_score_codex":0.0005606071,"about_ca_topic_score_gemma":0.01088925,"teacher_disagreement_score":0.05115527,"about_ca_system_score_codex":0.0000054968787,"about_ca_system_score_gemma":0.000008664532,"threshold_uncertainty_score":0.6076457},"labels":[],"label_agreement":null},{"id":"W2765577491","doi":"10.1186/s12870-017-1109-0","title":"Constitutive expression of OsDof4, encoding a C2-C2 zinc finger transcription factor, confesses its distinct flowering effects under long- and short-day photoperiods in rice (Oryza sativa L.)","year":2017,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Plant Molecular Biology Research","field":"Agricultural and Biological Sciences","cited_by":47,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Northeast Institute of Geography and Agroecology, Chinese Academy of Sciences; National Key Research and Development Program of China; State Key Laboratory of Hybrid Rice; Chinese Academy of Sciences; Institute of Genetics; National Natural Science Foundation of China; Clemson University","keywords":"Biology; Oryza sativa; Zinc finger; Transcription factor; Zinc finger transcription factor; Genetics; Gene","score_opus":0.060123063416976756,"score_gpt":0.2951089749290706,"score_spread":0.23498591151209386,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2765577491","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99778897,0.0004856385,0.00016163566,0.00007154852,0.0001956591,0.0004063506,0.00035340057,0.000025266298,0.00051152083],"genre_scores_gemma":[0.9994423,0.0001983702,0.000038766935,0.000027276574,0.00004952987,0.000030970077,0.00017636061,0.0000015389242,0.000034929373],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99834156,0.0004176253,0.00026043376,0.0004702,0.00010374103,0.0004064229],"domain_scores_gemma":[0.99871236,0.00092160644,0.00012510066,0.00010319323,0.000044662,0.00009306427],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00036352503,0.00021597146,0.00040724382,0.000042470365,0.00031265878,0.000048914117,0.0003455365,0.00030178693,0.000050004375],"category_scores_gemma":[0.00047401458,0.000094882766,0.000060706992,0.000067544126,0.00044768292,0.00012574285,0.00017941633,0.00022938,0.00000513729],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001291003,0.000038631362,0.19749919,0.00004385952,0.000011615501,0.00003194748,0.00007544471,9.2899563e-7,0.80098283,0.00014423046,0.000005325594,0.0010368819],"study_design_scores_gemma":[0.00027326043,0.0001914182,0.6084608,0.00014861947,0.00000738186,0.000037625327,0.000051926494,0.00005021658,0.3904205,0.000044982397,0.00014151745,0.00017179485],"about_ca_topic_score_codex":0.00028451678,"about_ca_topic_score_gemma":0.0030289514,"teacher_disagreement_score":0.41096157,"about_ca_system_score_codex":0.000025375919,"about_ca_system_score_gemma":0.00003088662,"threshold_uncertainty_score":0.38692066},"labels":[],"label_agreement":null},{"id":"W2767105090","doi":"10.1186/s12870-017-1142-z","title":"Genome-wide analysis of the cellulose synthase-like (Csl) gene family in bread wheat (Triticum aestivum L.)","year":2017,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Polysaccharides and Plant Cell Walls","field":"Agricultural and Biological Sciences","cited_by":73,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"Consortium of International Agricultural Research Centers; Ministère de l'Économie, de la Science et de l'Innovation - Québec; Compute Canada; Natural Sciences and Engineering Research Council of Canada; McGill University","keywords":"Biology; Gene family; Gene; Genome; Genetics; Botany; Biotechnology","score_opus":0.033020993902816216,"score_gpt":0.22705349733210337,"score_spread":0.19403250342928716,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2767105090","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9963162,0.00049241644,0.000009447044,0.00028877487,0.00026808743,0.0001760615,0.0018455301,0.00001573384,0.0005877494],"genre_scores_gemma":[0.9986771,0.0002377979,0.000040846113,0.00022642301,0.0000804915,0.000008922394,0.00040503053,9.715454e-7,0.00032243304],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99858564,0.00016812443,0.00035067456,0.0003760837,0.000108747496,0.0004107018],"domain_scores_gemma":[0.99875903,0.0006147385,0.000270499,0.00024463606,0.000029522382,0.00008156715],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00034312508,0.00018255481,0.00046405394,0.000050418723,0.0002229276,0.000033463173,0.0009035999,0.00020740961,0.00014395203],"category_scores_gemma":[0.00011086648,0.00006277381,0.00023476682,0.00026889547,0.00018680342,0.000055777695,0.00021558079,0.0001426314,0.000021830785],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000038098373,0.000047447807,0.43869007,0.000003764989,0.000053377276,0.000008062006,0.000013979919,0.000012565327,0.56055653,0.000060372444,0.000071967756,0.00044378266],"study_design_scores_gemma":[0.00012851579,0.000074940064,0.97940546,0.000015091275,0.00012993641,0.000008149457,0.000030144933,0.00027659928,0.015213176,0.00009255339,0.0044532246,0.00017219981],"about_ca_topic_score_codex":0.007527866,"about_ca_topic_score_gemma":0.02031043,"teacher_disagreement_score":0.54534334,"about_ca_system_score_codex":0.000020703657,"about_ca_system_score_gemma":0.000019765263,"threshold_uncertainty_score":0.9990811},"labels":[],"label_agreement":null},{"id":"W2768686064","doi":"10.1186/s12870-017-1151-y","title":"A post-gene silencing bioinformatics protocol for plant-defence gene validation and underlying process identification: case study of the Arabidopsis thaliana NPR1","year":2017,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Plant-Microbe Interactions and Immunity","field":"Agricultural and Biological Sciences","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Division of Mathematical Sciences; National Eye Institute; African Institute for Mathematical Sciences; International Development Research Centre; Government of Canada","keywords":"Biology; Arabidopsis thaliana; Identification (biology); Computational biology; Gene; Arabidopsis; Gene silencing; NPR1; Genetics; Bioinformatics; Botany; Mutant","score_opus":0.12579558669719793,"score_gpt":0.33782969790905426,"score_spread":0.21203411121185634,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2768686064","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9837434,0.0000031910479,0.000038770595,0.00007201814,0.000119105265,0.015097459,0.0008955355,0.000014055973,0.00001642319],"genre_scores_gemma":[0.9936389,0.0000020184063,0.00011414427,0.000020883546,0.000040918447,0.006026396,0.00013335871,8.135834e-7,0.000022596563],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99918807,0.00008165002,0.00033653626,0.00017540301,0.000060711427,0.00015761638],"domain_scores_gemma":[0.9989388,0.00023862638,0.0005241994,0.00015445518,0.00011367177,0.000030222596],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00029164596,0.00011228781,0.00015745059,0.000016749224,0.00096935563,0.00010698778,0.0003456238,0.00007790779,0.000008551503],"category_scores_gemma":[0.00015807364,0.000041773616,0.000040636896,0.000053335534,0.000076179414,0.00020526214,0.00009584446,0.0000812588,0.0000014803378],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013736957,0.00022117705,0.047197886,0.00008772097,0.000031336087,0.0000050577246,0.0009890205,0.000008435653,0.9473056,0.000018793593,0.000043859414,0.0039537516],"study_design_scores_gemma":[0.0020146337,0.0022212237,0.3533227,0.00024104217,0.00013240636,0.006448545,0.031776547,0.0031384153,0.5990208,0.00036834428,0.0006235926,0.00069176784],"about_ca_topic_score_codex":0.0017653685,"about_ca_topic_score_gemma":0.0036431951,"teacher_disagreement_score":0.34828484,"about_ca_system_score_codex":0.00001271483,"about_ca_system_score_gemma":0.000021207517,"threshold_uncertainty_score":0.7455598},"labels":[],"label_agreement":null},{"id":"W2770181257","doi":"10.1186/s12870-017-1148-6","title":"Involvement of LeMDR, an ATP-binding cassette protein gene, in shikonin transport and biosynthesis in Lithospermum erythrorhizon","year":2017,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Bioactive Compounds and Antitumor Agents","field":"Pharmacology, Toxicology and Pharmaceutics","cited_by":15,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Program for Changjiang Scholars and Innovative Research Team in University; Program for New Century Excellent Talents in University; Brock University; National Natural Science Foundation of China","keywords":"ATP-binding cassette transporter; Biology; Biochemistry; Biosynthesis; Methyl jasmonate; Elicitor; Naphthoquinone; Yeast; Cell biology; Gene; Transporter; Botany","score_opus":0.18647376179653097,"score_gpt":0.4112492224857286,"score_spread":0.22477546068919763,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2770181257","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9978396,0.00026303728,0.000019754896,0.00029674722,0.000266836,0.00048902095,0.00052306574,0.000016679121,0.0002852433],"genre_scores_gemma":[0.9987802,0.0002778541,0.00049624423,0.00013398551,0.000062085106,0.000048398048,0.00012203848,0.00001402118,0.00006520357],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99831516,0.0003430875,0.00042281838,0.00043283254,0.000059621987,0.00042650013],"domain_scores_gemma":[0.99925554,0.000111264366,0.00024762377,0.00025459033,0.000021814047,0.00010914027],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008376875,0.00021939524,0.00043279203,0.00020365945,0.0001751806,0.000013225999,0.0003372034,0.00036839995,0.00009304038],"category_scores_gemma":[0.00003970066,0.00019704526,0.00005148,0.00006565903,0.00037295424,0.00013388618,0.00008359836,0.0003584087,0.000005306291],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00032725523,0.00024631844,0.65849054,0.000058097845,0.000027773487,0.00007434096,0.00029206873,0.0000021424162,0.33889696,0.00061305106,0.000010032246,0.0009613866],"study_design_scores_gemma":[0.0020374097,0.0003026474,0.71459514,0.00009667727,0.000035014113,0.000028972188,0.00016676821,0.00046380702,0.2784979,0.00023219266,0.0032239228,0.00031951678],"about_ca_topic_score_codex":0.00086021976,"about_ca_topic_score_gemma":0.0059362296,"teacher_disagreement_score":0.060399055,"about_ca_system_score_codex":0.000052255276,"about_ca_system_score_gemma":0.000072270515,"threshold_uncertainty_score":0.80352724},"labels":[],"label_agreement":null},{"id":"W2779582356","doi":"10.1186/s12870-017-1212-2","title":"Ectopically expressing MdPIP1;3, an aquaporin gene, increased fruit size and enhanced drought tolerance of transgenic tomatoes","year":2017,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Plant nutrient uptake and metabolism","field":"Agricultural and Biological Sciences","cited_by":74,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Chinese Academy of Sciences; Directorate for Biological Sciences; Institute of Genetics and Developmental Biology, Chinese Academy of Sciences; China Agricultural University; Institute of Genetics; National Natural Science Foundation of China","keywords":"Biology; Transgene; Aquaporin; Genetically modified crops; Gene; Drought tolerance; Botany; Horticulture; Cell biology; Genetics","score_opus":0.030488339120564516,"score_gpt":0.24549205448242709,"score_spread":0.21500371536186258,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2779582356","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9979041,0.0007625982,0.000028999148,0.000076043514,0.00018696969,0.00016501868,0.00048951956,0.000039938284,0.00034681457],"genre_scores_gemma":[0.99772096,0.00092205324,0.00073381455,0.000100085505,0.00026635817,0.000012885704,0.0001509539,0.0000011507168,0.000091746595],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9988325,0.000119777345,0.00027968312,0.00037521115,0.00008498168,0.00030782825],"domain_scores_gemma":[0.99917346,0.00030219115,0.00022045498,0.0001483541,0.000030453008,0.00012508602],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00018036466,0.00016953547,0.00038320484,0.0000106529205,0.0002800217,0.000050402366,0.00041641126,0.00018401763,0.00007369799],"category_scores_gemma":[0.00011121452,0.00007050218,0.00007095736,0.000039248072,0.00016672783,0.00016203569,0.000058655063,0.00008588286,0.00000405538],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00016199789,0.00006116766,0.02829178,0.000008037826,0.000009183921,0.0000030882659,0.000054084216,1.9611535e-7,0.95779693,0.00054835365,0.000016350357,0.013048809],"study_design_scores_gemma":[0.00054726587,0.00018752167,0.60250974,0.000033558517,0.000019320987,0.00002035031,0.00003100325,0.000023140141,0.3844006,0.0006179829,0.011396129,0.00021336111],"about_ca_topic_score_codex":0.00038829152,"about_ca_topic_score_gemma":0.0013053025,"teacher_disagreement_score":0.574218,"about_ca_system_score_codex":0.0000037462748,"about_ca_system_score_gemma":0.000015449767,"threshold_uncertainty_score":0.28749958},"labels":[],"label_agreement":null},{"id":"W2803491757","doi":"10.1186/s12870-018-1303-8","title":"Novel flax orbitide derived from genetic deletion","year":2018,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Phytoestrogen effects and research","field":"Medicine","cited_by":11,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of Saskatchewan","funders":"Saskatchewan Flax Development Commission; Ministry of Agriculture - Saskatchewan; Salesforce; Genome Canada","keywords":"Linum; Biology; Coding region; Gene; Amino acid; Mass spectrometry; Protein primary structure; Ribosomal protein; Peptide sequence; Genetics; Botany; Ribosome; Chemistry; Chromatography","score_opus":0.0432656284032216,"score_gpt":0.308622166210349,"score_spread":0.26535653780712737,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2803491757","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9935341,0.00023733979,0.0048609343,0.00010968261,0.00023624573,0.00021232494,0.00015143203,0.000040059193,0.00061791163],"genre_scores_gemma":[0.99074924,0.00004145232,0.0073937513,0.0003231328,0.00093687634,0.000014257714,0.00039861907,0.000010796681,0.00013186166],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9992112,0.000058942263,0.00013039036,0.0002407592,0.00007354468,0.00028514472],"domain_scores_gemma":[0.99947923,0.00013736569,0.00003269381,0.00018411958,0.000055183184,0.00011138524],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00008985662,0.000095153206,0.00019475803,0.00006266221,0.000059109516,0.000005541472,0.00007735073,0.00013613452,0.00027753672],"category_scores_gemma":[0.00009408549,0.00006466152,0.000045570647,0.000062032974,0.00017874692,0.000010985817,0.00004630727,0.00011273945,0.00036924065],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00025768744,0.00006122941,0.06441986,0.0000125524575,0.00003705648,0.000021322248,0.00001955438,4.7587505e-7,0.9333919,0.00008353996,0.00060122926,0.0010935873],"study_design_scores_gemma":[0.0020619067,0.001449605,0.70177484,0.00006496404,0.00005297739,0.00032888318,0.000017129829,0.0018244314,0.27873394,0.00023433423,0.013291277,0.00016573373],"about_ca_topic_score_codex":0.00041735917,"about_ca_topic_score_gemma":0.00025161606,"teacher_disagreement_score":0.65465796,"about_ca_system_score_codex":0.000024844905,"about_ca_system_score_gemma":0.000109131106,"threshold_uncertainty_score":0.47459644},"labels":[],"label_agreement":null},{"id":"W2803806205","doi":"10.1186/s12870-018-1277-6","title":"The biochemical composition and transcriptome of cotyledons from Brassica napus lines expressing the AtGL3 transcription factor and exhibiting reduced flea beetle feeding","year":2018,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Genomics, phytochemicals, and oxidative stress","field":"Biochemistry, Genetics and Molecular Biology","cited_by":10,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Global Institute for Water Security; Western University; Plant Biotechnology Institute; University of Saskatchewan; Agriculture and Agri-Food Canada","funders":"Saskatchewan Canola Development Commission","keywords":"Biology; Brassica; Transcriptome; Flea beetle; Transcription factor; Composition (language); Botany; Genetics; Gene; Gene expression","score_opus":0.022566583991233014,"score_gpt":0.25502576460553644,"score_spread":0.23245918061430343,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2803806205","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99548566,0.002220156,0.0011551767,0.0002205191,0.00019908613,0.0001635186,0.000488987,0.000010025183,0.00005684243],"genre_scores_gemma":[0.99796873,0.00034706824,0.0006573421,0.00007110163,0.0005457357,0.00001114356,0.0003742282,0.000012175301,0.0000124574835],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9990259,0.000110976776,0.00025610492,0.0003353505,0.00005033858,0.00022137765],"domain_scores_gemma":[0.999438,0.00015462504,0.0001256493,0.00016765068,0.000059845133,0.00005425298],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00011443581,0.00015955458,0.00018750431,0.00002132799,0.00026266475,0.00003244239,0.00015301214,0.00018616054,0.000003890329],"category_scores_gemma":[0.00006310828,0.00010399757,0.00005689661,0.000034226145,0.00073889625,0.0000057708403,0.000060550497,0.00010385864,5.977178e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00024816737,0.000017351751,0.0017382436,0.00001221004,0.00003890447,1.4774332e-7,0.00031296888,1.501528e-7,0.9967515,0.000060608516,0.00015832685,0.00066145515],"study_design_scores_gemma":[0.00046304177,0.00015178739,0.0048181666,0.00004035853,0.000028288627,0.000014916781,0.00028632616,0.000078639925,0.99270594,0.00020168969,0.0010764989,0.00013436672],"about_ca_topic_score_codex":0.000043602136,"about_ca_topic_score_gemma":0.00004870903,"teacher_disagreement_score":0.0040455465,"about_ca_system_score_codex":0.0000064861097,"about_ca_system_score_gemma":0.000023320901,"threshold_uncertainty_score":0.4240898},"labels":[],"label_agreement":null},{"id":"W2805348952","doi":"10.1186/s12870-018-1334-1","title":"A newly formed hexaploid wheat exhibits immediate higher tolerance to nitrogen-deficiency than its parental lines","year":2018,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Plant nutrient uptake and metabolism","field":"Agricultural and Biological Sciences","cited_by":31,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Agriculture and Agri-Food Canada; National Natural Science Foundation of China","keywords":"Biology; Shoot; Photosynthesis; Common wheat; Nitrogen; Ploidy; Adaptability; Gene; Botany; Genetics; Ecology","score_opus":0.03511660194725845,"score_gpt":0.24154537100422674,"score_spread":0.20642876905696828,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2805348952","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9935256,0.001575922,0.000007919945,0.00058649894,0.0015165705,0.00037543467,0.0012122121,0.00013157394,0.0010682234],"genre_scores_gemma":[0.99451065,0.0004058563,0.0001550863,0.0012169519,0.0021416405,0.000050692608,0.000643431,0.0000023293362,0.00087333756],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.99804723,0.00009764899,0.00034749246,0.0005729889,0.00015699049,0.0007776671],"domain_scores_gemma":[0.9992738,0.00016828395,0.000108710396,0.00009255049,0.00008830236,0.00026835082],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00018286337,0.00028174568,0.0003741505,0.000039003153,0.0002514576,0.00003749815,0.00044213733,0.00021590009,0.0002787104],"category_scores_gemma":[0.000059251404,0.00010956494,0.000116853975,0.00037412252,0.000094409974,0.000113770555,0.00013348609,0.0001132528,0.0007400742],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00039072588,0.00014533132,0.071702585,0.0000064867777,0.0000105331455,0.000008219298,0.00010430479,6.4440695e-7,0.9125426,0.001233456,0.0056555024,0.008199639],"study_design_scores_gemma":[0.0007629109,0.0013393243,0.20014024,0.000052110394,0.00002740435,0.00010021703,0.00010656984,0.00003949959,0.07114036,0.00057749514,0.7250595,0.0006543728],"about_ca_topic_score_codex":0.00014026805,"about_ca_topic_score_gemma":0.0017105713,"teacher_disagreement_score":0.84140223,"about_ca_system_score_codex":0.000016590331,"about_ca_system_score_gemma":0.00002226399,"threshold_uncertainty_score":0.95124036},"labels":[],"label_agreement":null},{"id":"W2805919582","doi":"10.1186/s12870-018-1312-7","title":"Silicon protects soybean plants against Phytophthora sojae by interfering with effector-receptor expression","year":2018,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Silicon Effects in Agriculture","field":"Agricultural and Biological Sciences","cited_by":111,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Agriculture and Agri-Food Canada; Ministère de l'Agriculture, des Pêcheries et de l'Alimentation; Université Laval","funders":"Fonds de recherche du Québec – Nature et technologies; Canadian Network for Research and Innovation in Machining Technology, Natural Sciences and Engineering Research Council of Canada","keywords":"Phytophthora sojae; Effector; Biology; Receptor; Apoplast; Cell biology; Virulence; Transcriptome; Plant defense against herbivory; Inoculation; Gene expression; Pathogen; Gene; Botany; Microbiology; Genetics; Cell wall; Horticulture","score_opus":0.013731944475002178,"score_gpt":0.21766360477344304,"score_spread":0.20393166029844087,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2805919582","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9973124,0.00014037946,0.00001800339,0.000076971286,0.00041129763,0.00073492486,0.00049916474,0.00023763473,0.0005691977],"genre_scores_gemma":[0.99748254,0.000011842847,0.00015807222,0.00021945972,0.0008871107,0.000114958726,0.0009887143,0.0000033168121,0.00013396215],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9980956,0.00031621163,0.00022809373,0.00065141736,0.00013926585,0.00056945253],"domain_scores_gemma":[0.99908406,0.00043173973,0.0001625769,0.00011623843,0.000046784986,0.00015863116],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00022307181,0.00034687304,0.00035907014,0.00001950637,0.00025145645,0.000050472707,0.00043751296,0.00033712183,0.00022595226],"category_scores_gemma":[0.00007534294,0.00010800289,0.00007089981,0.00017987692,0.0002111486,0.00009673602,0.00014538396,0.0002462472,0.0002623931],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00035532846,0.00006992861,0.014033686,0.000017632765,0.000015325011,0.000003883409,0.000044033837,4.7776535e-7,0.973054,0.000008526379,0.0057875956,0.006609565],"study_design_scores_gemma":[0.00041562793,0.0020289326,0.024224434,0.00020775155,0.000005838744,0.000049210845,0.00012023898,0.000036102636,0.9527124,0.000013951479,0.019743424,0.00044204688],"about_ca_topic_score_codex":0.00006297351,"about_ca_topic_score_gemma":0.00037568487,"teacher_disagreement_score":0.020341577,"about_ca_system_score_codex":0.000037825117,"about_ca_system_score_gemma":0.000009702514,"threshold_uncertainty_score":0.440423},"labels":[],"label_agreement":null},{"id":"W2808457011","doi":"10.1186/s12870-018-1342-1","title":"Characterization of the Populus Rab family genes and the function of PtRabE1b in salt tolerance","year":2018,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Cellular transport and secretion","field":"Biochemistry, Genetics and Molecular Biology","cited_by":37,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"National Natural Science Foundation of China","keywords":"Biology; Subfamily; Rab; Gene duplication; Populus trichocarpa; Functional divergence; Arabidopsis; Gene; Gene family; Genome; Genetics; Subcellular localization; Ras superfamily; Segmental duplication; Function (biology); Mutant; GTPase; Biochemistry; Enzyme","score_opus":0.01051426004470869,"score_gpt":0.20047557989851056,"score_spread":0.18996131985380188,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2808457011","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99400157,0.000536893,0.004972374,0.000031582407,0.00020726692,0.00014124528,0.00005120121,0.0000017456061,0.0000561152],"genre_scores_gemma":[0.9984926,0.00039128034,0.00002574437,0.00008011986,0.00009353114,0.000005757999,0.0008750794,0.0000034644504,0.00003240413],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9995117,0.00008227302,0.00018038893,0.00012035403,0.000029255414,0.000075994976],"domain_scores_gemma":[0.9997199,0.000008821481,0.000101726764,0.00013093196,0.000030237903,0.00000836704],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00016348303,0.000057887624,0.00010851228,0.000017327078,0.000027401915,0.0000015485952,0.00007594874,0.00009915691,0.0000032291107],"category_scores_gemma":[0.000010220808,0.00003311799,0.000033932065,0.000050124752,0.00023918235,0.0000016018905,0.000019874517,0.00003052772,3.5688373e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005602084,0.000010358413,0.080079034,0.000011853632,0.0000065589097,4.6353268e-8,0.00004464479,0.0000012862179,0.91828525,0.00040462436,0.0000017839569,0.00059433014],"study_design_scores_gemma":[0.00089771126,0.00015266633,0.46027675,0.000013404705,0.00001456884,0.000004475976,0.000022157486,0.00016333908,0.5332559,0.000104773004,0.005037025,0.000057282115],"about_ca_topic_score_codex":0.00006793818,"about_ca_topic_score_gemma":0.0004693911,"teacher_disagreement_score":0.38502944,"about_ca_system_score_codex":0.0000017145343,"about_ca_system_score_gemma":0.000020114809,"threshold_uncertainty_score":0.13505124},"labels":[],"label_agreement":null},{"id":"W2809846363","doi":"10.1186/s12870-018-1347-9","title":"COP9 signalosome subunit 5A affects phenylpropanoid metabolism, trichome formation and transcription of key genes of a regulatory tri-protein complex in Arabidopsis","year":2018,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Plant Gene Expression Analysis","field":"Biochemistry, Genetics and Molecular Biology","cited_by":44,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Western University; McMaster University; Agriculture and Agri-Food Canada","funders":"Anhui Agricultural University; National Natural Science Foundation of China","keywords":"Biology; Arabidopsis; Gene; Protein subunit; COP9 signalosome; Genetics; Transcription factor; Phenylpropanoid; Computational biology; Transcription (linguistics); Cell biology; Biochemistry; Mutant; Enzyme","score_opus":0.02384542727409045,"score_gpt":0.24145377572403354,"score_spread":0.2176083484499431,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2809846363","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99622583,0.0013132588,0.0015636982,0.000021753502,0.000050913914,0.00028948285,0.00039842218,0.000008820686,0.00012780547],"genre_scores_gemma":[0.99755806,0.00030325804,0.0011238288,0.000038223698,0.00008464901,0.000024055511,0.00078792305,0.000010823526,0.00006918584],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9986037,0.0003473561,0.0004251255,0.00030557276,0.00010056475,0.00021770649],"domain_scores_gemma":[0.9992846,0.00003405235,0.00028879257,0.00024687694,0.00008632368,0.000059349728],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00034848045,0.00017475794,0.00044239374,0.00028590267,0.000035996734,0.0000048686725,0.00016618274,0.00024199882,0.000029674586],"category_scores_gemma":[0.00006602845,0.00014983481,0.00009250534,0.00021780175,0.0002158368,0.000011011048,0.00005284481,0.00005910346,0.0000025099102],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00066268566,0.00006368921,0.0022157663,0.00008450832,0.000048222635,7.329522e-7,0.00008739011,0.000009951394,0.9956586,0.00013363574,0.0003218261,0.00071303535],"study_design_scores_gemma":[0.0013144661,0.0003458333,0.010151406,0.000033766737,0.0000531063,0.00002019555,0.00006863529,0.0005428043,0.9834211,0.00008233378,0.0037959751,0.00017036458],"about_ca_topic_score_codex":0.00005909537,"about_ca_topic_score_gemma":0.00026288195,"teacher_disagreement_score":0.012237443,"about_ca_system_score_codex":0.000009472645,"about_ca_system_score_gemma":0.000052259442,"threshold_uncertainty_score":0.61100864},"labels":[],"label_agreement":null},{"id":"W2885316384","doi":"10.1186/s12870-018-1366-6","title":"Consensus genetic linkage map construction and QTL mapping for plant height-related traits in linseed flax (Linum usitatissimum L.)","year":2018,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Phytoestrogen effects and research","field":"Medicine","cited_by":52,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Biotechnology Research Institute","funders":"Agricultural Science and Technology Innovation Program; Modern Agricultural Technology Industry System of Shandong province; National Natural Science Foundation of China","keywords":"Biology; Linum; Quantitative trait locus; Population; Genetic linkage; Plant breeding; Locus (genetics); SNP genotyping; Single-nucleotide polymorphism; Agronomy; Genetics; Gene; Genotype","score_opus":0.03496644027277342,"score_gpt":0.2955022430389435,"score_spread":0.2605358027661701,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2885316384","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.996152,0.0007988749,0.0007181121,0.00036123107,0.000483448,0.000933789,0.00035571516,0.000043371903,0.00015345433],"genre_scores_gemma":[0.9851999,0.00008053419,0.013609627,0.000117952695,0.00041735318,0.000040076706,0.00036102024,0.000019622752,0.00015388259],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99860096,0.00015659275,0.00035263592,0.0003712906,0.00007265036,0.00044584819],"domain_scores_gemma":[0.9990471,0.00053492666,0.00008781003,0.00011642342,0.0000673304,0.00014642935],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003096217,0.00016853999,0.00040022164,0.0002443606,0.00009992734,0.000010474342,0.00006034455,0.00031972578,0.000030190356],"category_scores_gemma":[0.00014997079,0.00012507086,0.000049517697,0.00011903384,0.000426723,0.000012409113,0.000035767705,0.00022360701,0.000021851924],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0032261936,0.00022564174,0.16431907,0.0009275703,0.0003177103,0.00039695954,0.0009125819,0.0000053692625,0.81056106,0.0017843746,0.0023325086,0.014990939],"study_design_scores_gemma":[0.03302233,0.010828373,0.7815191,0.0018060693,0.00030746264,0.012377559,0.0009606454,0.048286125,0.05723092,0.006341919,0.045898348,0.0014211569],"about_ca_topic_score_codex":0.00005171062,"about_ca_topic_score_gemma":0.00015227577,"teacher_disagreement_score":0.7533302,"about_ca_system_score_codex":0.00003260582,"about_ca_system_score_gemma":0.00016947628,"threshold_uncertainty_score":0.5100242},"labels":[],"label_agreement":null},{"id":"W2886652481","doi":"10.1186/s12870-018-1368-4","title":"Construction of high-density linkage maps for mapping quantitative trait loci for multiple traits in field pea (Pisum sativum L.)","year":2018,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Genetic and Environmental Crop Studies","field":"Agricultural and Biological Sciences","cited_by":74,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"National Research Council Canada; Agriculture and Agri-Food Canada; University of Saskatchewan","funders":"National Research Council Canada; Natural Sciences and Engineering Research Council of Canada; Saskatchewan Pulse Growers; Western Grains Research Foundation; Ministry of Agriculture - Saskatchewan","keywords":"Biology; Quantitative trait locus; Single-nucleotide polymorphism; Sativum; Genetic linkage; Field pea; Genetics; Inbred strain; Horticulture; Genotype; Gene","score_opus":0.05063801113754562,"score_gpt":0.23899533078475554,"score_spread":0.18835731964720992,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2886652481","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9960564,0.000049687573,0.002108731,0.00026904646,0.00013203599,0.0003748477,0.00095103617,0.000010148231,0.000048087877],"genre_scores_gemma":[0.98769367,0.000019163901,0.011780579,0.000072636096,0.00011970011,0.00003613314,0.00024802034,6.548271e-7,0.000029422987],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.999321,0.000042347558,0.0001977828,0.0002140712,0.000030285388,0.00019450935],"domain_scores_gemma":[0.999192,0.0006521157,0.000090667454,0.000020607467,0.000022657854,0.000021948223],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001297672,0.00009381045,0.00022607614,0.000012635631,0.00010161731,0.0000034545767,0.00007669152,0.00011359973,0.000027412425],"category_scores_gemma":[0.000106602536,0.000041796407,0.000059216814,0.000053398533,0.0001973776,0.000017237677,0.000032197833,0.000037502505,0.0000034074826],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0007199516,0.0001073754,0.18487158,0.00006696064,0.000042167558,4.4643136e-7,0.00062263786,0.0000033115975,0.775409,0.0052906126,0.00070319074,0.032162763],"study_design_scores_gemma":[0.000739727,0.0019613784,0.938276,0.000022633309,0.0000121719695,0.000005794551,0.0023538843,0.00014034002,0.046379164,0.0053220717,0.0046072565,0.00017957046],"about_ca_topic_score_codex":0.00058455975,"about_ca_topic_score_gemma":0.009655999,"teacher_disagreement_score":0.75340444,"about_ca_system_score_codex":0.000010464591,"about_ca_system_score_gemma":0.0000035248781,"threshold_uncertainty_score":0.53882736},"labels":[],"label_agreement":null},{"id":"W2889688729","doi":"10.1186/s12870-018-1409-z","title":"Comparative transcriptome analysis reveals that tricarboxylic acid cycle-related genes are associated with maize CMS-C fertility restoration","year":2018,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Plant Reproductive Biology","field":"Biochemistry, Genetics and Molecular Biology","cited_by":24,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ministry of Agriculture","funders":"National Key Research and Development Program of China; Department of Science and Technology of Sichuan Province","keywords":"Cytoplasmic male sterility; Biology; Gene; Genetics; Sterility","score_opus":0.039226696614162636,"score_gpt":0.2742049056139781,"score_spread":0.23497820899981545,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2889688729","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9953372,0.0011190319,0.0012406526,0.00008385432,0.00022146976,0.00041722937,0.001111493,0.00006823146,0.00040086702],"genre_scores_gemma":[0.99307436,0.000065897526,0.00032108853,0.00012454038,0.0001629865,0.00005253651,0.0059175296,0.00001765504,0.00026343527],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9968882,0.0009228674,0.0004332131,0.0011076155,0.00012518317,0.0005229117],"domain_scores_gemma":[0.9984579,0.000085754575,0.00045928315,0.00062025944,0.00025948358,0.0001173146],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00056179566,0.0003736868,0.00078945974,0.00022876744,0.00017537735,0.000018505089,0.0003314229,0.0005934333,0.000041015726],"category_scores_gemma":[0.00021879238,0.0002856721,0.00018425855,0.000623841,0.0005943754,0.000010223668,0.00006908186,0.00017619156,0.000025547488],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0011277247,0.0001012703,0.30062258,0.0000049511696,0.001128275,0.000004325389,0.00007863906,0.000017150163,0.69655895,0.000034140936,0.00028154382,0.0000404835],"study_design_scores_gemma":[0.0010846537,0.0011242889,0.7363927,0.00001485829,0.00050509436,0.000041688407,0.000109600296,0.00019400424,0.25819045,0.00013697158,0.0017188934,0.00048681904],"about_ca_topic_score_codex":0.00007209612,"about_ca_topic_score_gemma":0.0024033606,"teacher_disagreement_score":0.43836847,"about_ca_system_score_codex":0.00006361494,"about_ca_system_score_gemma":0.000092568764,"threshold_uncertainty_score":0.9999595},"labels":[],"label_agreement":null},{"id":"W2894093726","doi":"10.1186/s12870-018-1402-6","title":"Arabidopsis ETHYLENE RESPONSE FACTOR 8 (ERF8) has dual functions in ABA signaling and immunity","year":2018,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Plant-Microbe Interactions and Immunity","field":"Agricultural and Biological Sciences","cited_by":80,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canada's Michael Smith Genome Sciences Centre; University of British Columbia; University of Toronto","funders":"Natural Sciences and Engineering Research Council of Canada; Welch Foundation","keywords":"Biology; Nicotiana benthamiana; Arabidopsis; Transcription factor; Cell biology; Pseudomonas syringae; Kinase; Phosphorylation; Protein kinase A; Hypersensitive response; Signal transduction; Genetics; Mutant; Plant disease resistance; Pathogen; Gene","score_opus":0.06364071505301193,"score_gpt":0.2544223632650633,"score_spread":0.19078164821205135,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2894093726","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9979576,0.000117675736,0.000011180023,0.0003871985,0.00028441063,0.00009958467,0.0009551389,0.00004204649,0.00014517856],"genre_scores_gemma":[0.99908733,0.0000356257,0.00008077925,0.00013196284,0.00015002838,0.000008604801,0.00028796995,8.4152913e-7,0.00021685992],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9987165,0.0004992275,0.00022860878,0.00023465302,0.000039646693,0.00028138017],"domain_scores_gemma":[0.99860334,0.0011443371,0.0000754989,0.00007010248,0.0000452871,0.00006143471],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003941974,0.00013695656,0.0001884906,0.000046649955,0.00040380823,0.00004884353,0.00013334607,0.00017069683,0.0005669588],"category_scores_gemma":[0.00021386884,0.00005829915,0.000045415665,0.00018864353,0.00022180135,0.00009187086,0.00010020605,0.0002531262,0.00009282863],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006744757,0.000069755915,0.03412583,0.0000016341701,0.000010360953,0.0000029599648,0.0001189346,3.9906075e-7,0.962053,0.000017615559,0.00027939308,0.0026456239],"study_design_scores_gemma":[0.00028904452,0.00086730975,0.9019347,0.00003380722,0.00000904686,0.00019856282,0.0007804586,0.000053097334,0.041572023,0.00011341952,0.053885445,0.00026310267],"about_ca_topic_score_codex":0.0027453778,"about_ca_topic_score_gemma":0.011374589,"teacher_disagreement_score":0.92048097,"about_ca_system_score_codex":0.000027423383,"about_ca_system_score_gemma":0.00002145433,"threshold_uncertainty_score":0.6347287},"labels":[],"label_agreement":null},{"id":"W2896202087","doi":"10.1186/s12870-018-1454-7","title":"Characterization and subcellular localization of histone deacetylases and their roles in response to abiotic stresses in soybean","year":2018,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Histone Deacetylase Inhibitors Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":63,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"Youth Innovation Promotion Association of the Chinese Academy of Sciences; Youth Innovation Promotion Association; Chinese Academy of Sciences; Natural Science Foundation of Guangdong Province; National Natural Science Foundation of China","keywords":"Biology; Epigenetics; Histone; Arabidopsis; Subcellular localization; Abiotic stress; Gene; Abiotic component; Genetics; Arabidopsis thaliana; Gene expression; Function (biology); Regulation of gene expression; Cell biology","score_opus":0.012828529252109873,"score_gpt":0.27960463135304126,"score_spread":0.2667761021009314,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2896202087","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99678046,0.0005202035,0.00222935,0.00006981906,0.000037202146,0.00020916482,0.0001402721,0.0000048201364,0.000008709141],"genre_scores_gemma":[0.9991343,0.00015993977,0.00009717521,0.00004817465,0.000050351096,0.000010787062,0.00043911545,0.0000109733455,0.000049176113],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99893755,0.0002914374,0.0002316285,0.0003068953,0.00004055255,0.00019191703],"domain_scores_gemma":[0.99962145,0.000064394524,0.00005666918,0.00015336051,0.0000483429,0.000055753026],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00035033934,0.000115628296,0.00018040772,0.00022264553,0.000030239951,0.000006261369,0.00007658135,0.00016238308,0.0000043976506],"category_scores_gemma":[0.00031384054,0.000103101105,0.0000133869535,0.00013831514,0.00023403476,0.0000043834116,0.0000934458,0.000049970105,0.0000019829788],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0011935162,0.000046760288,0.041252937,0.000028820334,0.00000407986,0.0000021531423,0.0003682557,0.000005816297,0.9563736,0.000019021374,0.000021153906,0.00068389723],"study_design_scores_gemma":[0.00052036054,0.000616035,0.030033618,0.000054257118,0.0000019405832,0.000017713312,0.00010559629,0.00045896685,0.9655543,0.000011137178,0.0025034542,0.00012259581],"about_ca_topic_score_codex":0.00011134837,"about_ca_topic_score_gemma":0.0031234906,"teacher_disagreement_score":0.01121932,"about_ca_system_score_codex":0.000022820097,"about_ca_system_score_gemma":0.0000685537,"threshold_uncertainty_score":0.42043412},"labels":[],"label_agreement":null},{"id":"W2897706920","doi":"10.1186/s12870-018-1434-y","title":"Association genetics of acetophenone defence against spruce budworm in mature white spruce","year":2018,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Forest Insect Ecology and Management","field":"Environmental Science","cited_by":23,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"U.S. Forest Service; Natural Resources Canada; Génome Québec; Canadian Forest Service; Ministère des Forêts, de la Faune et des Parcs; Genome Canada","keywords":"Biology; Spruce budworm; Genetic architecture; Choristoneura fumiferana; Single-nucleotide polymorphism; Genetics; Gene; Population; Genetic association; Genetic variation; Genome-wide association study; Quantitative trait locus; Locus (genetics); Ecology; Genotype; Lepidoptera genitalia","score_opus":0.010174699517655346,"score_gpt":0.21682797378326316,"score_spread":0.2066532742656078,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2897706920","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9889944,0.00005080094,0.0002182556,0.00009256436,0.0003175147,0.00017808078,0.000038781684,0.000017841361,0.010091713],"genre_scores_gemma":[0.996272,0.000095461925,0.002338456,0.00042502454,0.000053982698,0.000010587099,0.00004231611,0.000005386136,0.00075676176],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9990736,0.00009210724,0.00021689387,0.00024266311,0.00008181233,0.00029291175],"domain_scores_gemma":[0.99954444,0.000076374825,0.00016316559,0.0001752097,0.000008048089,0.000032767904],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00034452538,0.00010159858,0.00016055864,0.000047601694,0.000048340004,0.000003634312,0.00022985454,0.00021669424,0.0005976598],"category_scores_gemma":[0.000071068505,0.00009097294,0.000026363457,0.00018513456,0.00018228122,0.000040926196,0.00019962357,0.00011314193,0.00037089395],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006220311,0.00006130627,0.9717107,0.000009587057,0.0000115210205,0.0000036956826,0.00020723045,0.00026130205,0.022680579,0.00058890425,0.003928484,0.000474512],"study_design_scores_gemma":[0.00037581116,0.00018358963,0.98548293,0.0000099890985,0.000010099592,0.0000045791353,0.00004268089,0.00047606352,0.0031782952,0.0010631583,0.009036785,0.00013603111],"about_ca_topic_score_codex":0.00011313473,"about_ca_topic_score_gemma":0.010240127,"teacher_disagreement_score":0.019502284,"about_ca_system_score_codex":0.00014312699,"about_ca_system_score_gemma":0.000011301606,"threshold_uncertainty_score":0.6543956},"labels":[],"label_agreement":null},{"id":"W2897950512","doi":"10.1186/s12870-018-1478-z","title":"The nitrilase PtNIT1 catabolizes herbivore-induced nitriles in Populus trichocarpa","year":2018,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Plant nutrient uptake and metabolism","field":"Agricultural and Biological Sciences","cited_by":22,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canada's Michael Smith Genome Sciences Centre; Michael Smith Health Research BC","funders":"Max-Planck-Gesellschaft","keywords":"Nitrilase; Populus trichocarpa; Biology; Cyanide; Biochemistry; Nitrile; Salicaceae; Biosynthesis; Asparagine; Enzyme; Lyase; Gene; Botany; Chemistry; Genome; Woody plant; Organic chemistry","score_opus":0.03704083155435469,"score_gpt":0.24638892588613376,"score_spread":0.20934809433177906,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2897950512","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99440354,0.0023967682,0.0000014030933,0.00038202573,0.00088326726,0.00031536355,0.00037617874,0.000070963986,0.0011705006],"genre_scores_gemma":[0.9962451,0.0013450693,0.00003674271,0.0003677577,0.001221299,0.000045761157,0.0003548883,0.0000014722724,0.0003819459],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9981779,0.0002965551,0.00036823933,0.00039148642,0.00012053667,0.00064528035],"domain_scores_gemma":[0.9987964,0.00078010355,0.00012898061,0.00011505381,0.000056949022,0.0001224893],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005046822,0.00021419027,0.00031206655,0.00004105017,0.00039305387,0.000050055238,0.000507859,0.00022333443,0.000060505594],"category_scores_gemma":[0.00025740598,0.000066917004,0.0000889042,0.00050201535,0.0001622055,0.00007121362,0.000098149816,0.00018883844,0.00022066222],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0012428848,0.0002637723,0.21968368,0.000007267462,0.000035654626,0.00003987949,0.00019822842,2.4475455e-7,0.60129344,0.0141271,0.007695204,0.15541263],"study_design_scores_gemma":[0.00065845205,0.00036913267,0.20074421,0.000021085998,0.000015511345,0.00007202448,0.00035439123,0.00002977933,0.016865108,0.0016978236,0.7788495,0.00032301756],"about_ca_topic_score_codex":0.0015103028,"about_ca_topic_score_gemma":0.021204246,"teacher_disagreement_score":0.7711542,"about_ca_system_score_codex":0.000018877055,"about_ca_system_score_gemma":0.000029967488,"threshold_uncertainty_score":0.99665624},"labels":[],"label_agreement":null},{"id":"W2899623688","doi":"10.1186/s12870-018-1498-8","title":"RNA-seq analysis reveals considerable genetic diversity and provides genetic markers saturating all chromosomes in the diploid wild wheat relative Aegilops umbellulata","year":2018,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Wheat and Barley Genetics and Pathology","field":"Agricultural and Biological Sciences","cited_by":27,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Institute of Genetics; Precursory Research for Embryonic Science and Technology; Japan Science and Technology Agency; Ministry of Education, Culture, Sports, Science and Technology","keywords":"Biology; Aegilops tauschii; Genetics; Genetic diversity; Single-nucleotide polymorphism; Ploidy; Allele; Nucleotide diversity; Haplotype; Genotype; Gene; Chromosome; Population","score_opus":0.039502601510902256,"score_gpt":0.2325877070480192,"score_spread":0.19308510553711694,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2899623688","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9971108,0.0013267244,0.0000179605,0.00057622424,0.00008916881,0.0002915828,0.00013947353,0.000018928644,0.000429165],"genre_scores_gemma":[0.9977287,0.00042753777,0.0008116607,0.00058236445,0.00019509545,0.000011050019,0.00013698758,0.000001103902,0.00010546591],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99820447,0.00052984786,0.00028720283,0.00047891165,0.000094073876,0.0004054675],"domain_scores_gemma":[0.9989433,0.00071489497,0.00011884697,0.00010957085,0.000042608568,0.000070756374],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00041129126,0.00019474413,0.000343359,0.000043886877,0.0006153035,0.0000411826,0.0002878286,0.00020090102,0.00010458284],"category_scores_gemma":[0.000080657504,0.0000730564,0.00008886391,0.00035448952,0.0003700628,0.000047661877,0.0003444812,0.00015562848,0.00000891747],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008030389,0.000033381395,0.85127246,0.000007893982,0.000086337095,0.00002502649,0.00069917465,0.0000052648847,0.1454134,0.00018700525,0.00024568575,0.0019440671],"study_design_scores_gemma":[0.00021380992,0.0006517709,0.99280673,0.000015394826,0.0001796432,0.00009171504,0.0003665503,0.00033517828,0.00065924,0.0032583156,0.0011764978,0.00024516787],"about_ca_topic_score_codex":0.0015483624,"about_ca_topic_score_gemma":0.014470461,"teacher_disagreement_score":0.14475416,"about_ca_system_score_codex":0.000013888188,"about_ca_system_score_gemma":0.000010885465,"threshold_uncertainty_score":0.8074857},"labels":[],"label_agreement":null},{"id":"W2900133599","doi":"10.1186/s12870-018-1495-y","title":"New insights into the evolution and functional divergence of the SWEET family in Saccharum based on comparative genomics","year":2018,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Plant nutrient uptake and metabolism","field":"Agricultural and Biological Sciences","cited_by":130,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ministry of Agriculture","funders":"National High-tech Research and Development Program; Program for New Century Excellent Talents in University; National Natural Science Foundation of China","keywords":"Biology; Saccharum; Genomics; Divergence (linguistics); Evolutionary biology; Comparative genomics; Functional genomics; Computational biology; Genetics; Botany; Genome; Gene","score_opus":0.04405678675000607,"score_gpt":0.22242127630374822,"score_spread":0.17836448955374215,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2900133599","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9981975,0.0006554897,0.00007843879,0.0002695518,0.0003526916,0.00014082504,0.000073732095,0.000006143634,0.0002256194],"genre_scores_gemma":[0.99921644,0.00011792034,0.000041664447,0.00032454752,0.0001884186,0.0000037344344,0.00005627952,2.3315827e-7,0.00005076436],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9993917,0.00013096102,0.0001298463,0.00016404549,0.00006397631,0.000119515156],"domain_scores_gemma":[0.99958336,0.0002482806,0.000074514675,0.00004471946,0.000020415284,0.000028718994],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00010856939,0.00007856533,0.00012133301,0.0000136767685,0.0001380578,0.0000053014305,0.00015122128,0.000070187845,0.000021864646],"category_scores_gemma":[0.00001930767,0.000021232448,0.000029366887,0.00016291079,0.00014676336,0.00002373481,0.000054681175,0.00007098169,0.000010022427],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00043743456,0.00005658213,0.13854384,0.0000016802089,0.000008105326,3.108154e-7,0.000506095,0.000029061162,0.8424301,0.01245124,0.0023927453,0.0031427708],"study_design_scores_gemma":[0.00017693761,0.0001702507,0.93110514,0.000010050272,0.000005111319,0.0000015417362,0.00017799725,0.0006447396,0.005271698,0.0016802214,0.060693175,0.000063144405],"about_ca_topic_score_codex":0.0010646384,"about_ca_topic_score_gemma":0.006168672,"teacher_disagreement_score":0.83715844,"about_ca_system_score_codex":0.00001638677,"about_ca_system_score_gemma":0.000033807406,"threshold_uncertainty_score":0.34422636},"labels":[],"label_agreement":null},{"id":"W2900142745","doi":"10.1186/s12870-018-1471-6","title":"An improved suppression subtractive hybridization technique to develop species-specific repetitive sequences from Erianthus arundinaceus (Saccharum complex)","year":2018,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Sugarcane Cultivation and Processing","field":"Agricultural and Biological Sciences","cited_by":9,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ministry of Agriculture","funders":"Natural Science Foundation of Guangdong Province; National Natural Science Foundation of China","keywords":"Biology; Suppression subtractive hybridization; Saccharum; Interspecific hybridization; Computational biology; Botany; Genetics; Gene; Gene expression; Hybrid","score_opus":0.07222526661373309,"score_gpt":0.28338960170180855,"score_spread":0.21116433508807547,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2900142745","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99131024,0.00003433378,0.0044299853,0.000559725,0.00039432,0.00051707757,0.0012632512,0.00017832342,0.0013127548],"genre_scores_gemma":[0.98959607,0.000028888411,0.005887748,0.0004234529,0.000760334,0.000053543805,0.0031665028,0.0000022502784,0.00008120783],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9983777,0.0002679911,0.00029583712,0.0006148132,0.000101430196,0.00034223322],"domain_scores_gemma":[0.9989271,0.0003392705,0.00018940368,0.0000922213,0.00031090406,0.0001410842],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00026789436,0.00020540674,0.00023898215,0.000037394522,0.00040176988,0.000088896784,0.0003313087,0.00018489719,0.0014964727],"category_scores_gemma":[0.00021028653,0.00009031057,0.00003138456,0.00050332077,0.00017617097,0.00023004223,0.00007251857,0.00011852019,0.000066640416],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00025362833,0.000039221602,0.008704447,0.0000017517243,0.000005583996,0.0000026902726,0.00022464308,3.6039535e-7,0.9832457,0.00039170924,0.0004919111,0.006638374],"study_design_scores_gemma":[0.0001498637,0.0006508689,0.2871091,0.000045321496,0.000004859787,0.000025973903,0.00094506395,0.00011581448,0.6387988,0.00055648753,0.07124289,0.00035495366],"about_ca_topic_score_codex":0.0005229484,"about_ca_topic_score_gemma":0.0022979488,"teacher_disagreement_score":0.3444469,"about_ca_system_score_codex":0.00004826831,"about_ca_system_score_gemma":0.000044033488,"threshold_uncertainty_score":0.9994163},"labels":[],"label_agreement":null},{"id":"W2900670146","doi":"10.1186/s12870-018-1515-y","title":"Analysis of a novel mutant allele of GSL8 reveals its key roles in cytokinesis and symplastic trafficking in Arabidopsis","year":2018,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Plant Molecular Biology Research","field":"Agricultural and Biological Sciences","cited_by":46,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Agriculture and Agri-Food Canada; Western University","funders":"Agriculture and Agri-Food Canada; Arizona Biomedical Research Commission; China Scholarship Council","keywords":"Callose; Plasmodesma; Biology; Arabidopsis; Arabidopsis thaliana; Gametophyte; Cell plate; Cytokinesis; Cell biology; Lateral root; Mutant; Botany; Cell wall; Genetics; Gene; Cell division; Cell","score_opus":0.03887284677781874,"score_gpt":0.2660811758357381,"score_spread":0.22720832905791935,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2900670146","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9986985,0.00023997675,0.000015003934,0.00007159904,0.00001783349,0.00015007275,0.00072708464,0.000008551723,0.00007140638],"genre_scores_gemma":[0.9994622,0.00011782477,0.000107536835,0.000031149073,0.000024540699,0.000009717581,0.00023952336,7.929151e-7,0.0000067225374],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9985588,0.00022987851,0.00042469217,0.00036303172,0.00008743211,0.00033614086],"domain_scores_gemma":[0.998868,0.0008125612,0.00015071822,0.00006004011,0.000058791178,0.000049905342],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005502922,0.00013235693,0.0005577965,0.0002264994,0.000029437479,0.000004975721,0.00024275207,0.00021316517,0.000042160587],"category_scores_gemma":[0.00035012586,0.00005772187,0.00007352222,0.0010523471,0.00021976895,0.000024639698,0.00010581004,0.00009326146,0.0000020708117],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013187357,0.00008022257,0.36624014,0.0000080612745,0.00005342021,0.000004462355,0.00005356764,0.000021340808,0.6328171,0.00012480422,0.0000028466068,0.00046213393],"study_design_scores_gemma":[0.00037504855,0.00044427783,0.97364926,0.000047682126,0.00005421424,0.000028537539,0.00010570306,0.003854499,0.021172961,0.000027759397,0.000092649134,0.00014738715],"about_ca_topic_score_codex":0.00034962597,"about_ca_topic_score_gemma":0.025106952,"teacher_disagreement_score":0.61164415,"about_ca_system_score_codex":0.000013814327,"about_ca_system_score_gemma":0.000015959831,"threshold_uncertainty_score":0.9926823},"labels":[],"label_agreement":null},{"id":"W2901778007","doi":"10.1186/s12870-018-1514-z","title":"MeioCapture: an efficient method for staging and isolation of meiocytes in the prophase I sub-stages of meiosis in wheat","year":2018,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"DNA Repair Mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":12,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Agriculture and Agri-Food Canada; University of Saskatchewan; National Research Council Canada; Global Institute for Water Security; Saskatchewan Research Council (Canada)","funders":"Biotechnology and Biological Sciences Research Council; Saskatchewan Wheat Development Commission; Genome Prairie; Western Grains Research Foundation; Genome Canada; Ministry of Agriculture - Saskatchewan; National Science Foundation","keywords":"Meiocyte; Meiosis; Biology; Prophase; Stamen; Genetics; Botany; Pollen; Gene","score_opus":0.020610205900757378,"score_gpt":0.3002331491010778,"score_spread":0.27962294320032044,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2901778007","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.974472,0.00030766998,0.024588961,0.000049348262,0.00004751467,0.00039733842,0.00011746489,0.0000034588097,0.00001623813],"genre_scores_gemma":[0.98096687,0.000028736984,0.018734768,0.000054727716,0.00003951087,0.000034843648,0.00012913243,0.0000070513593,0.0000043563023],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99904567,0.00026601108,0.00023441398,0.00025299873,0.000042938525,0.00015799608],"domain_scores_gemma":[0.99954456,0.00009329555,0.00010427014,0.00019314392,0.000046036897,0.000018663995],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008328962,0.00009679969,0.00018033618,0.00008446261,0.00001995597,0.0000035862095,0.00012855437,0.00013534259,0.0000013789763],"category_scores_gemma":[0.0001282066,0.0000617645,0.00003162527,0.000073177216,0.00008991706,0.000002473793,0.000044270993,0.000038516853,8.55475e-8],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003390476,0.00008538762,0.010047588,0.00004382604,0.000008080831,3.6277362e-7,0.0003411315,0.000062716,0.98754275,0.0008580662,0.000012030046,0.00065903645],"study_design_scores_gemma":[0.00074550946,0.001077888,0.0036986696,0.000017655602,0.000012926624,0.000009018051,0.00027434708,0.007085666,0.98652345,0.00031487725,0.00015287033,0.0000871229],"about_ca_topic_score_codex":0.00007808822,"about_ca_topic_score_gemma":0.00066017534,"teacher_disagreement_score":0.00702295,"about_ca_system_score_codex":0.0000058591854,"about_ca_system_score_gemma":0.000041468465,"threshold_uncertainty_score":0.2518683},"labels":[],"label_agreement":null},{"id":"W2902514831","doi":"10.1186/s12870-018-1528-6","title":"Identification and characterization of drought-responsive CC-type glutaredoxins from cassava cultivars reveals their involvement in ABA signalling","year":2018,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Redox biology and oxidative stress","field":"Biochemistry, Genetics and Molecular Biology","cited_by":52,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Institute of Genetics; Central Public-interest Scientific Institution Basal Research Fund for Chinese Academy of Tropical Agricultural Sciences; Institute of Genetics and Developmental Biology, Chinese Academy of Sciences; Chinese Academy of Tropical Agricultural Sciences; Chinese Academy of Sciences","keywords":"Glutaredoxin; Biology; Arabidopsis; Genome; Transcription factor; Abscisic acid; Abiotic stress; Botany; Abiotic component; Biotic stress; Gene; Cell biology; Genetics; Mutant","score_opus":0.024374446994104102,"score_gpt":0.26860994123962617,"score_spread":0.24423549424552207,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2902514831","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99684376,0.0002899826,0.0016143512,0.000036773206,0.00023791374,0.00022095414,0.0007259311,0.0000063254256,0.000024006817],"genre_scores_gemma":[0.9949842,0.00044758045,0.00022415291,0.00009287153,0.00017073865,0.000013193451,0.0039952034,0.00000837851,0.00006367713],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9987702,0.00029036324,0.00033071623,0.0003946522,0.00003517665,0.0001789127],"domain_scores_gemma":[0.9993657,0.00007455327,0.00022143645,0.00018595177,0.00011736158,0.000034998237],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002380068,0.00014570514,0.00021200711,0.00007501117,0.000053845426,0.000006811298,0.00013742856,0.00027220964,0.000010741376],"category_scores_gemma":[0.00012910039,0.000120217795,0.000030853887,0.000088666246,0.00025197235,0.000006940042,0.00008807908,0.00006698255,0.0000053095314],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00046761858,0.00008482281,0.066375665,0.000009683128,0.000041321055,9.644608e-7,0.0002760894,5.096166e-7,0.9321863,0.00011242499,0.00002602475,0.0004185445],"study_design_scores_gemma":[0.00073710066,0.00029901808,0.1601454,0.000033696528,0.000009367169,0.0000044245567,0.00014686829,0.00006520674,0.83716273,0.00030750627,0.0009573849,0.00013131845],"about_ca_topic_score_codex":0.000094727606,"about_ca_topic_score_gemma":0.00042027148,"teacher_disagreement_score":0.09502362,"about_ca_system_score_codex":0.000011383557,"about_ca_system_score_gemma":0.00004781414,"threshold_uncertainty_score":0.49023393},"labels":[],"label_agreement":null},{"id":"W2902563018","doi":"10.1186/s12870-018-1553-5","title":"Effects of ploidy variation on promoter DNA methylation and gene expression in rice (Oryza sativa L.)","year":2018,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Chromosomal and Genetic Variations","field":"Agricultural and Biological Sciences","cited_by":14,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ministry of Agriculture","funders":"Commonwealth Scientific and Industrial Research Organisation","keywords":"Biology; DNA methylation; Methylated DNA immunoprecipitation; Genetics; Ploidy; Methylation; Gene; Bisulfite sequencing; Epigenetics; RNA-Directed DNA Methylation; Differentially methylated regions; Epigenomics; Gene expression","score_opus":0.017978801363057254,"score_gpt":0.22679906872055614,"score_spread":0.20882026735749887,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2902563018","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99925935,0.000048567035,0.00008704288,0.00011229872,0.00009277632,0.00021810005,0.00004379646,0.0000132638925,0.00012477508],"genre_scores_gemma":[0.99896514,0.000017535136,0.0006899192,0.00004314793,0.00016128043,0.000014382285,0.00008722164,4.7547422e-7,0.000020881665],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9993243,0.00016385638,0.00015009475,0.00019843133,0.00004933468,0.00011397703],"domain_scores_gemma":[0.99941236,0.00042052226,0.00008485401,0.000029702742,0.000025251888,0.000027333957],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012566741,0.000075551,0.00011855097,0.00002061233,0.000055866858,0.000006129621,0.000059697617,0.00011016641,0.000036966416],"category_scores_gemma":[0.00009479423,0.000029230108,0.000017608663,0.00011804902,0.000038779694,0.000030702995,0.000033957065,0.00003994493,0.00000959266],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000056093133,0.00006286757,0.008980318,0.000008501531,0.0000027470621,3.4024842e-7,0.00017159105,6.3570536e-7,0.98780596,0.00025534187,0.0000070981537,0.0026484928],"study_design_scores_gemma":[0.00016672902,0.00042635357,0.5899054,0.000017299732,0.0000038289113,0.0000020510329,0.0000060837165,0.00007021292,0.4079104,0.0012424834,0.00019803233,0.00005116742],"about_ca_topic_score_codex":0.00009260072,"about_ca_topic_score_gemma":0.00035259456,"teacher_disagreement_score":0.58092505,"about_ca_system_score_codex":0.000008661022,"about_ca_system_score_gemma":0.0000052359756,"threshold_uncertainty_score":0.11919692},"labels":[],"label_agreement":null},{"id":"W2902999578","doi":"10.1186/s12870-018-1569-x","title":"Genome-wide identification and localization of chalcone synthase family in soybean (Glycine max [L]Merr)","year":2018,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Plant Gene Expression Analysis","field":"Biochemistry, Genetics and Molecular Biology","cited_by":67,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Agriculture and Agri-Food Canada; Western University","funders":"Agriculture and Agri-Food Canada","keywords":"Chalcone synthase; Biology; Gene; Genetics; Gene duplication; Genome; Intron; Gene family; Genomic organization; Gene cluster; Gene expression","score_opus":0.015735617888392756,"score_gpt":0.25286543762242847,"score_spread":0.2371298197340357,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2902999578","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9811535,0.00055907026,0.017543592,0.000036916474,0.000081818835,0.00012451962,0.00019703158,0.000008051527,0.00029550662],"genre_scores_gemma":[0.9969998,0.0004604631,0.0002790653,0.00014142062,0.00009274748,0.000009941128,0.0018252393,0.000009261837,0.00018208045],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99895245,0.0001243772,0.00033762856,0.0003578461,0.00005374465,0.0001739435],"domain_scores_gemma":[0.9994326,0.000030926112,0.00016705139,0.00025584645,0.00006219206,0.00005133501],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00026063362,0.00012014134,0.00020549152,0.00015244092,0.00003807682,0.000005938118,0.00013284507,0.00018104953,0.000019467197],"category_scores_gemma":[0.00015912161,0.0001082971,0.00003485549,0.00012517859,0.00016179461,0.000003578079,0.00008660403,0.00004076337,0.000012524183],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014434138,0.000037176957,0.065081015,0.000015059419,0.000023660992,0.0000014110001,0.000027944961,0.000017662212,0.93363434,0.000038804108,0.00079852197,0.00018007656],"study_design_scores_gemma":[0.00087383564,0.00028388132,0.082632236,0.00002880896,0.000038329956,0.000028400704,0.00012476003,0.0017964665,0.89513236,0.00011501627,0.018689321,0.00025660102],"about_ca_topic_score_codex":0.00006984904,"about_ca_topic_score_gemma":0.00042105556,"teacher_disagreement_score":0.03850198,"about_ca_system_score_codex":0.0000080564705,"about_ca_system_score_gemma":0.00003724893,"threshold_uncertainty_score":0.44162273},"labels":[],"label_agreement":null},{"id":"W2903332532","doi":"10.1186/s12870-018-1543-7","title":"Maize male sterile 33 encodes a putative glycerol-3-phosphate acyltransferase that mediates anther cuticle formation and microspore development","year":2018,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Plant Reproductive Biology","field":"Biochemistry, Genetics and Molecular Biology","cited_by":24,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Chinese Academy of Sciences; Institute of Genetics; National Natural Science Foundation of China","keywords":"Cutin; Microspore; Biology; Stamen; Cuticle (hair); Mutant; Acyltransferase; Wild type; Biosynthesis; Plant cuticle; Biochemistry; Botany; Gene; Cell biology; Wax; Pollen; Genetics","score_opus":0.021416096969345287,"score_gpt":0.24869845002200575,"score_spread":0.22728235305266045,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2903332532","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9946976,0.0009315914,0.0027610213,0.000083764,0.00024265201,0.00031599894,0.0007246724,0.000026897507,0.00021586033],"genre_scores_gemma":[0.9923974,0.00037916424,0.0043850807,0.00030847907,0.00022597262,0.000046023088,0.0020020304,0.000017572534,0.0002382796],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99853,0.00013960505,0.0002589741,0.0005929759,0.000057495265,0.0004209515],"domain_scores_gemma":[0.9994458,0.000050068043,0.0001141413,0.00022236397,0.00007562789,0.00009203133],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002671717,0.00025101518,0.0002518228,0.000058941096,0.0001448279,0.000019060899,0.0001747191,0.0002494926,0.00005917629],"category_scores_gemma":[0.00006303591,0.00020080296,0.000038632064,0.0000559833,0.000445602,0.000014842197,0.00013189777,0.00007524423,0.000052134452],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00091293675,0.00004377418,0.07116784,0.000025045134,0.00006383103,0.0000066551256,0.0004574057,4.858039e-7,0.9249052,0.00005645498,0.00056294905,0.001797468],"study_design_scores_gemma":[0.0007573679,0.00050889666,0.023537505,0.000012871359,0.000015827867,0.00045383768,0.00020221302,0.000029920478,0.9204675,0.00009852386,0.05363115,0.00028441084],"about_ca_topic_score_codex":0.000039901137,"about_ca_topic_score_gemma":0.0003445839,"teacher_disagreement_score":0.053068202,"about_ca_system_score_codex":0.000020881238,"about_ca_system_score_gemma":0.000088278364,"threshold_uncertainty_score":0.8188507},"labels":[],"label_agreement":null},{"id":"W2905224024","doi":"10.1186/s12870-018-1570-4","title":"Cloning and characterization of norbelladine synthase catalyzing the first committed reaction in Amaryllidaceae alkaloid biosynthesis","year":2018,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Chemical synthesis and alkaloids","field":"Chemistry","cited_by":59,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université du Québec à Trois-Rivières","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Biology; Biosynthesis; Cloning (programming); Amaryllidaceae; Alkaloid; ATP synthase; Biochemistry; Amaryllidaceae Alkaloids; Enzyme; Computational biology; Botany","score_opus":0.014537568177468459,"score_gpt":0.2202019802228305,"score_spread":0.20566441204536204,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2905224024","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9987836,0.000078842066,0.000020203963,0.00025078966,0.000052231488,0.000057530193,0.00017317619,0.000027136864,0.00055649446],"genre_scores_gemma":[0.9992439,0.00012670414,0.000053298558,0.00005098338,0.00017933961,0.000010305334,0.00029283538,0.000011649261,0.0000309789],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9991537,0.000031270094,0.00030675434,0.0002491992,0.000051086936,0.00020802525],"domain_scores_gemma":[0.9990285,0.00051603175,0.00017810793,0.00021465313,0.00002540911,0.000037299546],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00018971036,0.0001386271,0.00024659513,0.000055820077,0.0001012894,0.000011870867,0.00014602084,0.00016752438,0.00010337339],"category_scores_gemma":[0.00017152667,0.00009871177,0.00003823436,0.00011849862,0.00021256998,0.000045121727,0.00007378482,0.00011760576,0.000007804094],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010174956,0.000040929222,0.06928102,0.00005329357,0.000014826837,9.676128e-7,0.00010003512,6.0879664e-8,0.9286277,0.000050154267,0.000016020193,0.0017132],"study_design_scores_gemma":[0.00022842643,0.000020437039,0.021354418,0.00012844757,0.000019127592,0.000023090495,0.00005050488,0.00025190014,0.9716237,0.00002648142,0.0061449497,0.00012848144],"about_ca_topic_score_codex":0.00036587758,"about_ca_topic_score_gemma":0.0005880472,"teacher_disagreement_score":0.047926605,"about_ca_system_score_codex":0.000031380547,"about_ca_system_score_gemma":0.000013907001,"threshold_uncertainty_score":0.4025349},"labels":[],"label_agreement":null},{"id":"W2906161455","doi":"10.1186/s12870-018-1587-8","title":"Interactive effects of multiple vernalization (Vrn-1)- and photoperiod (Ppd-1)-related genes on the growth habit of bread wheat and their association with heading and flowering time","year":2018,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Wheat and Barley Genetics and Pathology","field":"Agricultural and Biological Sciences","cited_by":26,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Institute of Genetics; National Key Research and Development Program of China; Institute of Genetics and Developmental Biology, Chinese Academy of Sciences; Chinese Academy of Sciences","keywords":"Vernalization; Biology; photoperiodism; Sowing; Cultivar; Allele; Habit; Heading (navigation); Population; Growing season; Genotype; Horticulture; Winter wheat; Gene; Botany; Agronomy; Animal science; Genetics; Demography","score_opus":0.007385816061974021,"score_gpt":0.17953008227643405,"score_spread":0.17214426621446002,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2906161455","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9992753,0.00029671352,0.000010648072,0.000107812324,0.00004800016,0.00014038288,0.000054801316,0.0000061053347,0.000060191564],"genre_scores_gemma":[0.99965256,0.00018657692,0.00003106142,0.000036601392,0.00003672022,0.0000039700867,0.00003049134,7.442594e-7,0.000021278143],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.999522,0.000108672866,0.00010416623,0.0001403467,0.000028059252,0.00009680351],"domain_scores_gemma":[0.99911445,0.00070704333,0.000094275994,0.000021393107,0.000042389045,0.000020447878],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013829602,0.000080797,0.00015658428,0.000011927949,0.000082371196,0.000009353659,0.00003922166,0.000086940876,0.000009832763],"category_scores_gemma":[0.00006164714,0.00002559851,0.00001341961,0.000054118886,0.00011051762,0.000021811262,0.0000329296,0.000040959323,7.179623e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011881197,0.000014496083,0.1436057,0.000010307928,0.000018493789,3.121334e-7,0.00030340155,2.3238884e-7,0.8534813,0.000075627206,0.000009192622,0.0023621428],"study_design_scores_gemma":[0.00037964937,0.0019258888,0.3031949,0.00009708558,0.000018986533,0.000030800144,0.00011850125,0.0009974006,0.6927747,0.00022665907,0.00013060542,0.00010479892],"about_ca_topic_score_codex":0.00018546842,"about_ca_topic_score_gemma":0.0004604715,"teacher_disagreement_score":0.16070656,"about_ca_system_score_codex":0.0000054167317,"about_ca_system_score_gemma":0.000003001941,"threshold_uncertainty_score":0.1043877},"labels":[],"label_agreement":null},{"id":"W2918007417","doi":"10.1186/s12870-019-1633-1","title":"Soybean (Glycine max L. Merr.) seedlings response to shading: leaf structure, photosynthesis and proteomic analysis","year":2019,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Agronomic Practices and Intercropping Systems","field":"Agricultural and Biological Sciences","cited_by":109,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ministry of Agriculture","funders":"Program on Industrial Technology System of National Soybean; National Key Research and Development Program of China; National Natural Science Foundation of China","keywords":"Biology; Photosynthesis; Glycine; Botany; Shading; Canopy; Amino acid; Biochemistry","score_opus":0.01893182084948904,"score_gpt":0.22816301239737571,"score_spread":0.20923119154788666,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2918007417","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9980351,0.000060420403,0.000015176702,0.0007306627,0.00015631734,0.0004264406,0.0003257491,0.00004492118,0.00020522761],"genre_scores_gemma":[0.9983342,0.000009369247,0.00024118883,0.00036319613,0.00013037509,0.0000139747335,0.00010830788,0.0000015194174,0.00079783844],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99853706,0.00027036894,0.00028913567,0.0005159173,0.00006602445,0.00032148135],"domain_scores_gemma":[0.9990179,0.00056404923,0.00016613632,0.00010579384,0.00002543363,0.00012068707],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005231759,0.00018631243,0.0004246122,0.000066662265,0.00010410559,0.00005757423,0.0002658867,0.00016217362,0.00062047574],"category_scores_gemma":[0.00014580307,0.00007194204,0.00010427391,0.00028035627,0.000039384606,0.00008367215,0.00011629818,0.00011212546,0.000118396616],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0008577834,0.00001061521,0.09935496,0.000006199333,0.000103173785,0.0000010465602,0.00007523501,0.0000055375085,0.8986293,0.000055260556,0.00017534096,0.0007255583],"study_design_scores_gemma":[0.00049104315,0.0016387597,0.8525149,0.00006502703,0.0002841764,0.000113225375,0.00090626214,0.0016244639,0.06386571,0.00014422176,0.0775211,0.00083106663],"about_ca_topic_score_codex":0.0014542957,"about_ca_topic_score_gemma":0.0010293984,"teacher_disagreement_score":0.8347636,"about_ca_system_score_codex":0.000034372588,"about_ca_system_score_gemma":0.000010955849,"threshold_uncertainty_score":0.67937744},"labels":[],"label_agreement":null},{"id":"W2919665166","doi":"10.1186/s12870-018-1618-5","title":"Mechanisms of the IAA and ACC-deaminase producing strain of Trichoderma longibrachiatum T6 in enhancing wheat seedling tolerance to NaCl stress","year":2019,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Plant Stress Responses and Tolerance","field":"Agricultural and Biological Sciences","cited_by":156,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Government of Canada; Agriculture and Agri-Food Canada","funders":"California State University, Fresno; Gansu Agricultural University; National Natural Science Foundation of China","keywords":"Seedling; Biology; Horticulture; Strain (injury); Ethylene; Coleoptile; Trichoderma; Salinity; Botany; Biochemistry","score_opus":0.012305221126220097,"score_gpt":0.21215742369338497,"score_spread":0.19985220256716488,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2919665166","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9978829,0.00029740116,0.000048292884,0.00018411709,0.00017324425,0.0004276506,0.0009129689,0.000010650794,0.00006275121],"genre_scores_gemma":[0.9994093,0.000042767762,0.00026962726,0.000073564974,0.000035041518,0.000009998365,0.000043734293,0.0000011286797,0.00011484863],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9987292,0.00018204637,0.0003565134,0.0003487584,0.000100430785,0.00028302814],"domain_scores_gemma":[0.9991772,0.0004811634,0.0001727626,0.00009647546,0.000025386867,0.00004697026],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003011271,0.00014523204,0.00040031405,0.000033789885,0.000054296124,0.0000105305,0.0002675559,0.000110506415,0.0000247517],"category_scores_gemma":[0.00009675485,0.00005436923,0.00006168147,0.0002542856,0.000038061564,0.000053980897,0.00012366542,0.00012038563,0.0000021805456],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002732594,0.00003920527,0.10010386,0.000053403146,0.000005260564,0.0000017342571,0.00014614625,0.00018777864,0.89561814,0.00031160898,0.0000054784455,0.0032541011],"study_design_scores_gemma":[0.00043625935,0.00027069318,0.68068606,0.00048770622,0.000008081765,0.000028664768,0.00040487162,0.0008366285,0.31624693,0.000295648,0.00009216109,0.00020631182],"about_ca_topic_score_codex":0.00037568458,"about_ca_topic_score_gemma":0.0035993718,"teacher_disagreement_score":0.5805822,"about_ca_system_score_codex":0.000009425043,"about_ca_system_score_gemma":0.000017554878,"threshold_uncertainty_score":0.2217113},"labels":[],"label_agreement":null},{"id":"W2919981663","doi":"10.1186/s12870-019-1652-y","title":"Swift metabolite changes and leaf shedding are milestones in the acclimation process of grapevine under prolonged water stress","year":2019,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Horticultural and Viticultural Research","field":"Agricultural and Biological Sciences","cited_by":65,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"Biology; Veraison; Ripening; Berry; Horticulture; Acclimatization; Metabolism; Proline; Ecophysiology; Botany; Sucrose; Metabolite; Photosynthesis; Biochemistry","score_opus":0.04391071192066033,"score_gpt":0.28313664174837805,"score_spread":0.23922592982771773,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2919981663","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9968528,0.00035701648,1.6704107e-7,0.002173717,0.000038771443,0.00039895508,0.00011711731,0.000012414325,0.00004901426],"genre_scores_gemma":[0.99916697,0.00018474765,0.0000068746535,0.000102085614,0.000065586806,0.00003939933,0.0003734345,5.4941853e-7,0.000060364448],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9990139,0.00017717757,0.00016696678,0.00022788507,0.00011798053,0.00029611037],"domain_scores_gemma":[0.9995982,0.0002049905,0.00006644023,0.000040488267,0.000057625788,0.00003222815],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00029271448,0.00011635337,0.00022123005,0.000018693914,0.00007002997,0.000026195943,0.00019605472,0.000098019445,0.000061673316],"category_scores_gemma":[0.00003785356,0.000026226988,0.00003120387,0.00014782435,0.000072888346,0.00008414854,0.000057883848,0.00010774961,0.000010959409],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007277454,0.00004455871,0.21334554,0.00007440504,0.000008617329,0.0000010897323,0.00056983676,0.00000442918,0.7833742,0.00041830243,0.0000063464922,0.0020799062],"study_design_scores_gemma":[0.00021306143,0.0002785911,0.92084455,0.00005896855,0.000012190339,0.000020323514,0.005674833,0.000073892974,0.071702085,0.00034364936,0.00062711444,0.00015073367],"about_ca_topic_score_codex":0.00017597461,"about_ca_topic_score_gemma":0.0055391802,"teacher_disagreement_score":0.7116721,"about_ca_system_score_codex":0.000004904448,"about_ca_system_score_gemma":0.0000027761623,"threshold_uncertainty_score":0.30909926},"labels":[],"label_agreement":null},{"id":"W2924585671","doi":"10.1186/s12870-019-1686-1","title":"Transcriptome analysis reveals regulatory framework for salt and osmotic tolerance in a succulent xerophyte","year":2019,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Plant Stress Responses and Tolerance","field":"Agricultural and Biological Sciences","cited_by":41,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Carleton University","funders":"Fundamental Research Funds for the Central Universities; National Natural Science Foundation of China","keywords":"Biology; Transcriptome; Osmotic shock; Computational biology; Botany; Cell biology; Gene; Gene expression; Genetics","score_opus":0.019275105970829095,"score_gpt":0.23858797867945944,"score_spread":0.21931287270863034,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2924585671","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9968504,0.001246002,0.00014534045,0.0002432155,0.00014885303,0.00036295524,0.00094734016,0.000026469384,0.000029460092],"genre_scores_gemma":[0.9983245,0.0002559152,0.0006670584,0.00026081988,0.00008259878,0.000037594993,0.00023035104,0.0000010006421,0.00014014679],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9987594,0.00011669457,0.000262272,0.00043525203,0.00006816482,0.0003582414],"domain_scores_gemma":[0.99898285,0.0007581262,0.00008962694,0.00008063571,0.000017946024,0.00007082399],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00019321899,0.00015598457,0.00044597313,0.00004661755,0.00005978949,0.000019471378,0.00016985787,0.00019626014,0.00008192933],"category_scores_gemma":[0.00003843657,0.00006606895,0.0001294391,0.00033675172,0.000050691375,0.000042419993,0.00002233204,0.00010936528,0.000010465654],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000978005,0.00007154012,0.6895616,0.000054199587,0.00007922115,0.0000063899497,0.00007105207,0.00013229347,0.29719025,0.0083727585,0.0000589261,0.0034237385],"study_design_scores_gemma":[0.00032893484,0.0002478312,0.98989713,0.00006836311,0.000042311294,0.000011461414,0.000030622676,0.0009846966,0.000664484,0.0026668787,0.0048267017,0.00023057479],"about_ca_topic_score_codex":0.00014204973,"about_ca_topic_score_gemma":0.0011637602,"teacher_disagreement_score":0.30033553,"about_ca_system_score_codex":0.0000135761475,"about_ca_system_score_gemma":0.000006962517,"threshold_uncertainty_score":0.26942134},"labels":[],"label_agreement":null},{"id":"W2938941628","doi":"10.1186/s12870-019-1689-y","title":"The genetic architecture of phosphorus efficiency in sorghum involves pleiotropic QTL for root morphology and grain yield under low phosphorus availability in the soil","year":2019,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Plant nutrient uptake and metabolism","field":"Agricultural and Biological Sciences","cited_by":79,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Global Institute for Water Security; University of Saskatchewan","funders":"Consortium of International Agricultural Research Centers; Fundação de Amparo à Pesquisa do Estado de Minas Gerais; Conselho Nacional de Desenvolvimento Científico e Tecnológico","keywords":"Quantitative trait locus; Biology; Sorghum; Agronomy; Genetic architecture; Phosphorus; Allele; Gene; Genetics; Materials science","score_opus":0.01915444107796803,"score_gpt":0.21258607269438973,"score_spread":0.19343163161642168,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2938941628","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9899971,0.007916389,0.000019443522,0.00068301463,0.00029924934,0.0007479923,0.00027372694,0.000011293265,0.00005181508],"genre_scores_gemma":[0.99774677,0.0016089878,0.00004308253,0.00030789556,0.000059560443,0.000059464342,0.00008721065,0.0000012682071,0.00008576915],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99838835,0.00026136497,0.00037460012,0.00040379338,0.00009163047,0.00048026012],"domain_scores_gemma":[0.9977503,0.0019213416,0.00013119499,0.00013580127,0.000021868856,0.000039505947],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006651907,0.00018134339,0.00034097861,0.00002773738,0.00010687815,0.000018065264,0.00046234968,0.00021788708,0.000017883704],"category_scores_gemma":[0.00017352212,0.00005670612,0.00008042376,0.00023493543,0.00025719934,0.00002007916,0.00008279808,0.00021790844,0.000005538469],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006812556,0.00029152495,0.8026075,0.000023814413,0.0000136047165,0.000004202826,0.00035763413,0.000057346144,0.17305975,0.00463105,0.00037591482,0.017896459],"study_design_scores_gemma":[0.00063506624,0.00054973667,0.96933377,0.000022979848,0.000009825309,0.00003495587,0.0004725519,0.00012805634,0.0035916148,0.0053300257,0.019717226,0.00017420878],"about_ca_topic_score_codex":0.0009556041,"about_ca_topic_score_gemma":0.012900507,"teacher_disagreement_score":0.16946813,"about_ca_system_score_codex":0.000011498849,"about_ca_system_score_gemma":0.000027664551,"threshold_uncertainty_score":0.71987855},"labels":[],"label_agreement":null},{"id":"W2941470588","doi":"10.1186/s12870-019-1779-x","title":"Genome constitution and evolution of Elytrigia lolioides inferred from Acc1, EF-G, ITS, TrnL-F sequences and GISH","year":2019,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Genomics and Phylogenetic Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":11,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Saint Mary's University","funders":"National Key Research and Development Program of China; Chinese Academy of Sciences; National Natural Science Foundation of China","keywords":"Biology; Genome; Chloroplast DNA; Genetics; Hordeum; Gene; Hordeum vulgare; Introgression; Triticeae; Evolutionary biology; Botany; Poaceae","score_opus":0.014474691243051438,"score_gpt":0.22286839215151835,"score_spread":0.20839370090846693,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2941470588","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9854836,0.01304724,0.00015493044,0.000019178262,0.00015365121,0.00017413204,0.00059075595,0.0000030363685,0.00037349664],"genre_scores_gemma":[0.9968246,0.0023735103,0.00040414548,0.000027989157,0.00007827669,0.0000062629706,0.00023926716,0.0000041107614,0.00004178653],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9992893,0.000051564504,0.00018203043,0.00029634387,0.000030729105,0.000150038],"domain_scores_gemma":[0.99965227,0.000040686602,0.000099861325,0.00012808008,0.00004109067,0.000038043967],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000097722455,0.00012106596,0.00020687432,0.000041109568,0.00004272457,0.000007841133,0.00007855526,0.00016276268,0.00000785168],"category_scores_gemma":[0.000042212796,0.000102504455,0.000028593253,0.00003134099,0.00020529136,0.0000014568625,0.00011149304,0.00003856312,0.0000041638245],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006465529,0.000007523701,0.28404748,0.000015789086,0.00004281802,2.5423157e-7,0.000020991869,0.000009949627,0.71457183,0.0011050598,0.000011645348,0.00010200571],"study_design_scores_gemma":[0.0010642963,0.0005445761,0.86976373,0.000020901978,0.000049313978,0.000035244193,0.00017292159,0.00008858279,0.11604975,0.0015627648,0.010341598,0.0003063337],"about_ca_topic_score_codex":0.00022152546,"about_ca_topic_score_gemma":0.00015839412,"teacher_disagreement_score":0.59852207,"about_ca_system_score_codex":0.0000085513975,"about_ca_system_score_gemma":0.00007563977,"threshold_uncertainty_score":0.41800103},"labels":[],"label_agreement":null},{"id":"W2944854022","doi":"10.1186/s12870-019-1761-7","title":"Identification and characterization of water chestnut Soymovirus-1 (WCSV-1), a novel Soymovirus in water chestnuts (Eleocharis dulcis)","year":2019,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Plant and Fungal Interactions Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Agriculture and Agri-Food Canada","funders":"Guangxi Academy of Agricultural Sciences","keywords":"Biology; ORFS; Phylogenetic tree; DNA sequencing; Genetics; Novel virus; Sequence analysis; Genome; Nucleic acid sequence; Virus; genomic DNA; Gene; Peptide sequence; Open reading frame; Virology","score_opus":0.01932779769635288,"score_gpt":0.2602471149254794,"score_spread":0.24091931722912655,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2944854022","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99840426,0.00004795994,0.00053476164,0.00008243872,0.00021697656,0.0003031832,0.00025904673,0.0000087624185,0.00014262066],"genre_scores_gemma":[0.9942364,0.00019195129,0.000052621075,0.00005710089,0.00009489684,0.000038112954,0.004266915,0.000013715013,0.0010482501],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99873894,0.0000795851,0.0003553612,0.00041055877,0.00007849774,0.00033703816],"domain_scores_gemma":[0.99953955,0.000027913213,0.00007425732,0.00024559468,0.00006259127,0.00005011675],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003227998,0.00015737135,0.00022499706,0.00018371738,0.000037263908,0.000021637783,0.00016765631,0.00027707146,0.00007734878],"category_scores_gemma":[0.000029342462,0.00010956539,0.00004912674,0.00005427335,0.00007745804,0.000017864537,0.00014094304,0.00013462447,0.00012628423],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00036713248,0.00008028556,0.04675642,0.000047555684,0.000024512809,0.0000012904947,0.00011115944,0.0000037595164,0.9523294,0.000052214004,0.000024898463,0.00020135919],"study_design_scores_gemma":[0.00057217485,0.00014369804,0.03246935,0.0000170117,0.000007204286,0.00005160065,0.000025279083,0.0005247405,0.9605404,0.000020501528,0.0054633613,0.00016464865],"about_ca_topic_score_codex":0.00010146937,"about_ca_topic_score_gemma":0.00015955976,"teacher_disagreement_score":0.014287071,"about_ca_system_score_codex":0.000014063531,"about_ca_system_score_gemma":0.000030504665,"threshold_uncertainty_score":0.44679472},"labels":[],"label_agreement":null},{"id":"W2946855252","doi":"10.1186/s12870-019-1804-0","title":"The Solanum chacoense Fertilization-Related Kinase 3 (ScFRK3) is involved in male and female gametophyte development","year":2019,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Plant Reproductive Biology","field":"Biochemistry, Genetics and Molecular Biology","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Sherbrooke; Université de Montréal","funders":"Fonds de recherche du Québec – Nature et technologies; Natural Sciences and Engineering Research Council of Canada; Université de Montréal; Fonds Québécois de la Recherche sur la Nature et les Technologies","keywords":"Gametophyte; Biology; Ovule; Botany; Mitosis; Meiosis; Kinase; Cell biology; Genetics; Pollen; Gene","score_opus":0.014995954184907378,"score_gpt":0.2312526631148713,"score_spread":0.21625670892996393,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2946855252","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.996295,0.002322508,0.000045124983,0.00015472797,0.0003599412,0.0003947052,0.000074375785,0.0000135937,0.0003400276],"genre_scores_gemma":[0.99583113,0.0005612573,0.00037478175,0.0002758278,0.00006571366,0.000041255465,0.00077312236,0.000014917645,0.002061982],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9983497,0.00019838777,0.00033193917,0.00066220557,0.000051533352,0.0004062123],"domain_scores_gemma":[0.9993013,0.00008900487,0.00012009289,0.0003832798,0.00004618171,0.000060145656],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00041327323,0.00020999499,0.00023491797,0.000069038266,0.000091558795,0.000013544417,0.00020942374,0.0003073116,0.000032562857],"category_scores_gemma":[0.00014784493,0.00014979245,0.00003820212,0.00009624749,0.00015942435,0.0000039186048,0.0002016376,0.00012854514,0.0000764003],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00034783845,0.00003346003,0.40294737,0.000016584763,0.00004061618,0.000004655101,0.000098656295,0.000004741878,0.59531176,0.00023485668,0.00038348866,0.00057601277],"study_design_scores_gemma":[0.002278602,0.00056773005,0.3547218,0.000042288124,0.000017126378,0.00027717932,0.00036822038,0.0002495143,0.43365723,0.00031772384,0.2067657,0.000736894],"about_ca_topic_score_codex":0.00003400593,"about_ca_topic_score_gemma":0.00070472737,"teacher_disagreement_score":0.2063822,"about_ca_system_score_codex":0.000023330487,"about_ca_system_score_gemma":0.00013557058,"threshold_uncertainty_score":0.6108359},"labels":[],"label_agreement":null},{"id":"W2946981450","doi":"10.1186/s12870-019-1782-2","title":"Genetic factors affecting Fusarium head blight resistance improvement from introgression of exotic Sumai 3 alleles (including Fhb1, Fhb2, and Fhb5) in hard red spring wheat","year":2019,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Mycotoxins in Agriculture and Food","field":"Agricultural and Biological Sciences","cited_by":52,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Agriculture and Agri-Food Canada; University of Manitoba; University of Saskatchewan","funders":"Agriculture and Agri-Food Canada; Western Grains Research Foundation; Saskatchewan Wheat Development Commission; University of Saskatchewan","keywords":"Biology; Genetics; Introgression; Allele; Genotyping; Single-nucleotide polymorphism; Genotype; Gene; Microsatellite; Fusarium; Quantitative trait locus; SNP genotyping; Epistasis","score_opus":0.03682537961377336,"score_gpt":0.22677491675955933,"score_spread":0.18994953714578597,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2946981450","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9976758,0.0012770374,0.0000035849516,0.00010904049,0.0002499537,0.00037084782,0.00013372513,0.000032255535,0.00014777701],"genre_scores_gemma":[0.998793,0.00021717943,0.0005722427,0.000031287804,0.0001501451,0.000008454149,0.00016369957,0.0000016441163,0.000062319166],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99850476,0.00014106071,0.00037983063,0.0004972213,0.00011119347,0.000365952],"domain_scores_gemma":[0.999141,0.0004790037,0.00019591814,0.00008959301,0.000024614625,0.00006989223],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00020213392,0.00021491591,0.0004112787,0.00003375037,0.00009337635,0.000026105567,0.00021754182,0.0002185384,0.00006748654],"category_scores_gemma":[0.000051548595,0.00008163247,0.00006545199,0.00016048383,0.000047945774,0.00005913643,0.00017900446,0.00016207396,0.0000056218555],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000646211,0.000028868053,0.40523726,0.000020541025,0.000009680189,0.0000024841556,0.00007572869,0.000001026593,0.5937549,0.000039206687,0.000023391885,0.00074229296],"study_design_scores_gemma":[0.00036132106,0.00033791063,0.9315285,0.00016917769,0.000011993271,0.000004311996,0.00038430077,0.000025239826,0.06544708,0.00018739184,0.0013164841,0.00022625984],"about_ca_topic_score_codex":0.0006826847,"about_ca_topic_score_gemma":0.013185527,"teacher_disagreement_score":0.52830786,"about_ca_system_score_codex":0.00003685949,"about_ca_system_score_gemma":0.000006914015,"threshold_uncertainty_score":0.7357834},"labels":[],"label_agreement":null},{"id":"W2947340959","doi":"10.1186/s12870-019-1844-5","title":"Clubroot resistance gene Rcr6 in Brassica nigra resides in a genomic region homologous to chromosome A08 in B. rapa","year":2019,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Plant Disease Resistance and Genetics","field":"Agricultural and Biological Sciences","cited_by":66,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan; Agriculture and Agri-Food Canada","funders":"Agriculture and Agri-Food Canada","keywords":"Biology; Clubroot; Genetics; Bulked segregant analysis; Genome; Brassica rapa; Gene; Chromosome; Gene mapping; Brassica; Botany","score_opus":0.016991985941436073,"score_gpt":0.21100947168690837,"score_spread":0.19401748574547228,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2947340959","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.995858,0.0019041215,0.0000011284926,0.0007318853,0.00009074602,0.0004939097,0.00024821254,0.000027065025,0.0006449151],"genre_scores_gemma":[0.99800915,0.00054439134,0.00011929178,0.00045296826,0.00008633505,0.000050244216,0.0002893149,0.0000019888455,0.00044633195],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99802154,0.00026519664,0.0004209098,0.0006040214,0.000080973674,0.0006073608],"domain_scores_gemma":[0.99929893,0.00035794312,0.000087586355,0.00013175761,0.000016039196,0.00010772467],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00026279598,0.00020848299,0.00042206672,0.00012053439,0.000038052487,0.000020674153,0.00038140232,0.0002459666,0.00003498807],"category_scores_gemma":[0.000058540918,0.000102990125,0.00006201228,0.0005832493,0.00005651135,0.0000465607,0.00009182342,0.00017378617,0.000104363404],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00067703624,0.00009421322,0.46760473,0.000022374064,0.0000037428877,0.0001864314,0.00005679355,0.000030281384,0.52973413,0.0002989298,0.0007736132,0.0005177145],"study_design_scores_gemma":[0.00054624525,0.00022572246,0.97969747,0.00012057783,0.0000030189544,0.000033551358,0.00008830358,0.000020387171,0.0043542264,0.002395611,0.012173719,0.000341161],"about_ca_topic_score_codex":0.0005084507,"about_ca_topic_score_gemma":0.1371683,"teacher_disagreement_score":0.5253799,"about_ca_system_score_codex":0.000101271675,"about_ca_system_score_gemma":0.00004671042,"threshold_uncertainty_score":0.8785761},"labels":[],"label_agreement":null},{"id":"W2947613909","doi":"10.1186/s12870-019-1780-4","title":"Correction to: MeioCapture: an efficient method for staging and isolation of meiocytes in the prophase I sub-stages of meiosis in wheat","year":2019,"lang":"en","type":"erratum","venue":"BMC Plant Biology","topic":"Plant Reproductive Biology","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Agriculture and Agri-Food Canada; University of Saskatchewan; National Research Council Canada; Global Institute for Water Security; Saskatchewan Research Council (Canada)","funders":"","keywords":"Meiocyte; Biology; Meiosis; Prophase; Isolation (microbiology); Computational biology; Genetics; Bioinformatics; Gene","score_opus":0.018390381210819654,"score_gpt":0.29774522839964057,"score_spread":0.2793548471888209,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2947613909","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9706919,0.0039800107,0.012666067,0.0002072431,0.007240223,0.0027871924,0.0022432045,0.000010758141,0.00017336178],"genre_scores_gemma":[0.97841585,0.0008082627,0.0069589107,0.00018601916,0.0007361769,0.00028061683,0.011342804,0.000051983738,0.0012193562],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9976116,0.0007100824,0.0004976618,0.0007999997,0.000078952755,0.00030170492],"domain_scores_gemma":[0.9987802,0.00029144998,0.000352016,0.000435197,0.000108017804,0.000033143842],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0013248704,0.00028317902,0.000609809,0.00030705295,0.000025643834,0.0000065315885,0.0002800291,0.00061259884,0.0000012203358],"category_scores_gemma":[0.00068875344,0.00018851305,0.00007877916,0.00015296793,0.00010030428,0.0000035953747,0.000100563586,0.00026075565,2.873004e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.001242273,0.00016362623,0.014836508,0.0002549749,0.000038863505,0.0000010626608,0.0002761656,0.0006255489,0.9692011,0.00008892895,0.012480552,0.000790429],"study_design_scores_gemma":[0.0036068119,0.008565401,0.06453487,0.00064395583,0.00023246079,0.00022795639,0.0011345138,0.014507504,0.844079,0.00019411558,0.060843516,0.001429856],"about_ca_topic_score_codex":0.0003514831,"about_ca_topic_score_gemma":0.0023488675,"teacher_disagreement_score":0.12512203,"about_ca_system_score_codex":0.000030106032,"about_ca_system_score_gemma":0.00022296673,"threshold_uncertainty_score":0.7687339},"labels":[],"label_agreement":null},{"id":"W2947621352","doi":"10.1186/s12870-018-1616-7","title":"Molecular mapping of the Cf-10 gene by combining SNP/InDel-index and linkage analysis in tomato (Solanum lycopersicum)","year":2019,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Plant-Microbe Interactions and Immunity","field":"Agricultural and Biological Sciences","cited_by":75,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"Agriculture Research System of China; Natural Science Foundation of Heilongjiang Province; Postdoctoral Research Foundation of China; National Natural Science Foundation of China","keywords":"Biology; Indel; Genetics; Gene; Population; Gene mapping; Single-nucleotide polymorphism; Chromosome; Genotype","score_opus":0.01676309541920936,"score_gpt":0.21438005953509473,"score_spread":0.19761696411588536,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2947621352","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99870574,0.00021183636,0.000016887421,0.00011268589,0.000077825636,0.000116127885,0.0003424474,0.000010612636,0.00040583615],"genre_scores_gemma":[0.99930364,0.000034791603,0.00003000066,0.00012453983,0.000009615414,0.0000030227002,0.00032122163,5.700914e-7,0.00017258794],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99916106,0.00016994482,0.00022005416,0.00020616993,0.00004815351,0.0001945962],"domain_scores_gemma":[0.9995395,0.0002096021,0.000117684045,0.000083823856,0.000020518482,0.000028878809],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00018046028,0.000104772145,0.00025638827,0.000038218146,0.00006756144,0.00001656574,0.0002357893,0.00012629197,0.00019152563],"category_scores_gemma":[0.000022268378,0.00003884916,0.00009102574,0.00036392044,0.000049314964,0.0000394956,0.00012995157,0.000143103,0.000013069198],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000021292371,0.000028858141,0.2475826,0.000003511716,0.000044560104,9.322896e-7,0.00003158568,0.00001809798,0.7518777,0.000022688386,0.00010634971,0.00026178785],"study_design_scores_gemma":[0.00071428705,0.000291613,0.8340452,0.00009020441,0.00009016751,0.000095390074,0.001426643,0.0050529568,0.14596125,0.000092138915,0.0116830645,0.00045713372],"about_ca_topic_score_codex":0.0015441118,"about_ca_topic_score_gemma":0.0011922977,"teacher_disagreement_score":0.6059165,"about_ca_system_score_codex":0.000012860415,"about_ca_system_score_gemma":0.000007220978,"threshold_uncertainty_score":0.23342453},"labels":[],"label_agreement":null},{"id":"W2947730954","doi":"10.1186/s12870-019-1763-5","title":"Photoperiod sensitivity of Canadian flax cultivars and 5-azacytidine treated early flowering derivative lines","year":2019,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Phytoestrogen effects and research","field":"Medicine","cited_by":10,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of Saskatchewan; University of Manitoba","funders":"Wageningen University and Research; Natural Sciences and Engineering Research Council of Canada; Canadian Network for Research and Innovation in Machining Technology, Natural Sciences and Engineering Research Council of Canada; Ministry of Agriculture - Saskatchewan","keywords":"Biology; photoperiodism; Cultivar; Sowing; Locus (genetics); Horticulture; Genotype; Botany; Gene; Genetics","score_opus":0.02634769574783562,"score_gpt":0.27393956659392815,"score_spread":0.24759187084609252,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2947730954","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99838483,0.000119721575,0.000009202915,0.00009205582,0.00006718943,0.00041460307,0.00021152878,0.00001557334,0.00068529573],"genre_scores_gemma":[0.9992626,0.00006541624,0.0002251981,0.000043202668,0.00005105338,0.000005880745,0.00012290628,0.000009741947,0.00021404936],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9991827,0.000118109136,0.00013147414,0.00021860692,0.000055070377,0.00029401173],"domain_scores_gemma":[0.99938834,0.00018892455,0.00003598311,0.00013786448,0.000065846594,0.00018302465],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00021647762,0.000116523326,0.00035292725,0.0002808067,0.0000374565,0.000004811458,0.000033294935,0.0001223411,0.000042587773],"category_scores_gemma":[0.00012031562,0.0000791843,0.000039939812,0.00019249613,0.00010867574,0.00002544019,0.00003408395,0.00012848257,0.000018819093],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00020198013,0.000018216653,0.36873835,0.00005217397,0.000045844863,0.000051932777,0.00009624186,0.000001176977,0.630436,0.00003848622,0.000030574032,0.00028900028],"study_design_scores_gemma":[0.0012942731,0.0008261874,0.5926887,0.00011975658,0.000023788703,0.000274642,0.000074710886,0.001337727,0.40195084,0.0000057610564,0.001273757,0.00012988166],"about_ca_topic_score_codex":0.11460004,"about_ca_topic_score_gemma":0.04647019,"teacher_disagreement_score":0.22848518,"about_ca_system_score_codex":0.00003319036,"about_ca_system_score_gemma":0.00018686849,"threshold_uncertainty_score":0.97092927},"labels":[],"label_agreement":null},{"id":"W2947864203","doi":"10.1186/s12870-018-1589-6","title":"Genome-wide dynamic network analysis reveals a critical transition state of flower development in Arabidopsis","year":2019,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Plant Molecular Biology Research","field":"Agricultural and Biological Sciences","cited_by":18,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"University of Chinese Academy of Sciences; Chinese Academy of Sciences; Institute of Genetics; National Natural Science Foundation of China; Trinity College Dublin","keywords":"Biology; Gene regulatory network; Arabidopsis; Gene; Computational biology; Transcriptome; Transition (genetics); Genome; Genetics; Network dynamics; Arabidopsis thaliana; Gene expression","score_opus":0.016279942535391105,"score_gpt":0.24866889927644703,"score_spread":0.23238895674105592,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2947864203","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99860656,0.0002305152,0.00022948135,0.00020711622,0.00005673461,0.00024654175,0.0003156007,0.000017647522,0.00008978338],"genre_scores_gemma":[0.99742925,0.000056170844,0.0006088828,0.00013318169,0.000017146425,0.000018949733,0.0016754965,8.878724e-7,0.00006001177],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99818677,0.0004004188,0.0003957445,0.0004017634,0.00010747412,0.0005078504],"domain_scores_gemma":[0.9989486,0.00079036574,0.00006569464,0.000075107935,0.000047258844,0.00007301908],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006629376,0.0001415989,0.00044369436,0.00007927288,0.000044342003,0.000008160487,0.00024692185,0.00016906143,0.00025981732],"category_scores_gemma":[0.00008759958,0.0000619616,0.00011461245,0.0006843502,0.00009231175,0.000027743888,0.00006343647,0.00015014286,0.000070042726],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00022671271,0.000073953335,0.51856107,0.00001674839,0.000114127215,0.000015098473,0.000053558262,0.00041209278,0.47949183,0.000044770564,0.000011889841,0.000978169],"study_design_scores_gemma":[0.00015011782,0.00016332173,0.9967375,0.00001844275,0.000027473441,0.00001072152,0.000019687048,0.0006385415,0.0010346242,0.000365119,0.0006570066,0.0001774824],"about_ca_topic_score_codex":0.000079805024,"about_ca_topic_score_gemma":0.007172409,"teacher_disagreement_score":0.4784572,"about_ca_system_score_codex":0.000036906276,"about_ca_system_score_gemma":0.000027435151,"threshold_uncertainty_score":0.40023726},"labels":[],"label_agreement":null},{"id":"W2948890844","doi":"10.1186/s12870-019-1800-4","title":"Development of Agrobacterium-mediated transient expression system in Caragana intermedia and characterization of CiDREB1C in stress response","year":2019,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Plant tissue culture and regeneration","field":"Biochemistry, Genetics and Molecular Biology","cited_by":40,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Chinese Academy of Sciences; Institute of Genetics; National Natural Science Foundation of China","keywords":"Biology; Agrobacterium; Transformation (genetics); Gene expression; Horticulture; Botany; Gene; Biochemistry","score_opus":0.008617393298867106,"score_gpt":0.2082141622366749,"score_spread":0.1995967689378078,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2948890844","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99922025,0.00013163332,0.000116053016,0.000006481427,0.0001082975,0.00020158944,0.00019875418,0.0000025501308,0.000014400213],"genre_scores_gemma":[0.9966835,0.000045815887,0.00017469318,0.000005593552,0.000015677615,0.000010065964,0.0030273749,0.0000044884473,0.00003278943],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.999221,0.0001333165,0.0003125435,0.00019166284,0.00003586024,0.00010558887],"domain_scores_gemma":[0.9997194,0.000024029334,0.00011802283,0.00009483095,0.000020986256,0.000022735243],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00016547374,0.000089144574,0.00019416571,0.00009129666,0.000007560404,0.0000017902064,0.00006472366,0.00018432601,0.000002330242],"category_scores_gemma":[0.000020063466,0.000070153226,0.000015249416,0.00005001383,0.00002771936,0.0000035948458,0.000029615083,0.000038217924,0.0000010029065],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0008461624,0.000032531876,0.046312816,0.0001223038,0.0000065397294,0.0000016337071,0.000710472,0.0000052920614,0.9518188,0.000008136065,0.0000028874283,0.00013239686],"study_design_scores_gemma":[0.000542436,0.00008791427,0.18483803,0.00017576804,0.0000021252781,0.000011933647,0.00015656228,0.0000549694,0.81315875,9.391984e-8,0.0008977803,0.00007365431],"about_ca_topic_score_codex":0.000045639,"about_ca_topic_score_gemma":0.0019394073,"teacher_disagreement_score":0.13866009,"about_ca_system_score_codex":0.000014418449,"about_ca_system_score_gemma":0.000085591775,"threshold_uncertainty_score":0.28607655},"labels":[],"label_agreement":null},{"id":"W2949455562","doi":"10.1186/s12870-019-1868-x","title":"Improving the blast resistance of the elite rice variety Kongyu-131 by updating the pi21 locus","year":2019,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Genetic Mapping and Diversity in Plants and Animals","field":"Biochemistry, Genetics and Molecular Biology","cited_by":16,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Institute of Genetics; University of Chinese Academy of Sciences; Institute of Genetics and Developmental Biology, Chinese Academy of Sciences; Chinese Academy of Sciences","keywords":"Biology; Quantitative trait locus; Locus (genetics); Indel; Population; Genetics; Japonica; Gene; Genotype; Single-nucleotide polymorphism; Botany","score_opus":0.0070266666877824005,"score_gpt":0.1915853170414968,"score_spread":0.1845586503537144,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2949455562","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9926437,0.0016158212,0.00054599677,0.0004032996,0.00034570266,0.00024998316,0.00059359596,0.0000071346794,0.0035947235],"genre_scores_gemma":[0.9967153,0.0001886359,0.000121366575,0.00055687485,0.0001058395,0.0000042923375,0.000117627984,0.000006079126,0.0021839847],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9990354,0.0001665572,0.00019370917,0.00027448795,0.00008360221,0.00024621096],"domain_scores_gemma":[0.99916846,0.00011244446,0.0001990782,0.0004500631,0.00004437242,0.000025615274],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00037143048,0.00013077054,0.0001368413,0.000009234721,0.00021866501,0.000019933648,0.00055492413,0.00013369817,0.00001940855],"category_scores_gemma":[0.00010160386,0.000062011306,0.000093496616,0.00006942913,0.0001633923,0.000001830317,0.0002775403,0.00012665329,0.000012457212],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007571029,0.00001748239,0.013437825,0.00003282741,0.000036171037,2.0173282e-7,0.000068001515,0.000017072043,0.9737563,0.00061479106,0.011789091,0.0001545223],"study_design_scores_gemma":[0.0011616744,0.00031263204,0.02168388,0.00008981985,0.00010214373,0.000057906316,0.0018619751,0.00029460562,0.372575,0.00024516025,0.60108423,0.00053094793],"about_ca_topic_score_codex":0.00015300159,"about_ca_topic_score_gemma":0.00011114271,"teacher_disagreement_score":0.60118127,"about_ca_system_score_codex":0.0000045579127,"about_ca_system_score_gemma":0.000060247534,"threshold_uncertainty_score":0.25287476},"labels":[],"label_agreement":null},{"id":"W2953054596","doi":"10.1186/s12870-018-1405-3","title":"Nucleus- and plastid-targeted annexin 5 promotes reproductive development in Arabidopsis and is essential for pollen and embryo formation","year":2018,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"S100 Proteins and Annexins","field":"Biochemistry, Genetics and Molecular Biology","cited_by":33,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"European Regional Development Fund; Narodowe Centrum Nauki; European Commission","keywords":"Biology; Arabidopsis; Cell biology; Plastid; Pollen; Pollen tube; Microspore; RNA interference; Gamete; Stamen; Genetics; Botany; Mutant; Gene; Chloroplast; RNA","score_opus":0.014699553488112355,"score_gpt":0.24542229541939892,"score_spread":0.23072274193128656,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2953054596","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9976026,0.0006335742,0.0009904602,0.00012880127,0.000058727972,0.0003738318,0.00015182066,0.000007716558,0.000052486932],"genre_scores_gemma":[0.993698,0.0001254499,0.005498179,0.000103680744,0.00018873316,0.00004932918,0.00024377348,0.000009165068,0.000083683844],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99916077,0.000036989422,0.00017456569,0.0004069994,0.000025356987,0.00019532615],"domain_scores_gemma":[0.99972504,0.000018182745,0.00006755157,0.0001021098,0.000044418543,0.00004269115],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00017268825,0.00012436297,0.00014536375,0.00006464123,0.0000974614,0.000015492846,0.000046001554,0.00014936182,0.0000046202463],"category_scores_gemma":[0.000099669836,0.0001051071,0.000014320379,0.000037229496,0.00014503383,0.000008186795,0.00009037155,0.000035995596,0.0000010517207],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006470997,0.000043885022,0.013333669,0.0000675776,0.00003913568,7.772609e-7,0.0006756097,1.8794145e-7,0.9802617,0.00015217866,0.00074682495,0.004031392],"study_design_scores_gemma":[0.0013597753,0.00085844396,0.046661645,0.00002984244,0.000012329894,0.00007134157,0.00020783281,0.00031883342,0.93269753,0.0003032484,0.017210696,0.0002684865],"about_ca_topic_score_codex":0.0000289564,"about_ca_topic_score_gemma":0.0002767698,"teacher_disagreement_score":0.047564138,"about_ca_system_score_codex":0.0000059773524,"about_ca_system_score_gemma":0.00004015098,"threshold_uncertainty_score":0.42861432},"labels":[],"label_agreement":null},{"id":"W2953242960","doi":"10.1186/s12870-019-1861-4","title":"Genome-wide identification of GRF transcription factors in soybean and expression analysis of GmGRF family under shade stress","year":2019,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Plant Molecular Biology Research","field":"Agricultural and Biological Sciences","cited_by":80,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Key Research and Development Program of China; Institute of Genetics and Developmental Biology, Chinese Academy of Sciences; Chinese Academy of Sciences; Institute of Genetics; National Natural Science Foundation of China","keywords":"Biology; Identification (biology); Transcription factor; Genetics; Genome; Computational biology; Gene; Botany","score_opus":0.03565180197521716,"score_gpt":0.25115533976702664,"score_spread":0.21550353779180947,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2953242960","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9985389,0.00023568627,0.00006588317,0.000033284778,0.000042059066,0.00019238029,0.0008548656,0.000008563368,0.000028391203],"genre_scores_gemma":[0.9973877,0.00010747899,0.0000190379,0.000015605405,0.000008005274,0.0000046937266,0.00243467,6.3643125e-7,0.000022176415],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.998802,0.00027275746,0.0003400399,0.0003019144,0.000090722664,0.00019255879],"domain_scores_gemma":[0.9993647,0.00033195716,0.00015628578,0.0000701619,0.000030715,0.00004620874],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00028738735,0.00010177121,0.00032336888,0.00012761593,0.000021252707,0.000006334913,0.00019366447,0.0001973674,0.000028434686],"category_scores_gemma":[0.000039168644,0.00004308036,0.0000782994,0.00038959697,0.00009485304,0.000041306223,0.00004583803,0.000086386324,0.0000026383377],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00004582391,0.0000260023,0.47643825,0.0000065206204,0.000025005314,2.6263672e-7,0.000038717408,0.000021862787,0.52331674,0.00003208482,8.1457307e-7,0.000047887737],"study_design_scores_gemma":[0.000117562166,0.00010506642,0.85081804,0.000009736878,0.000027881659,4.7884646e-7,0.00042865876,0.00016369463,0.14817275,0.00006524342,0.000019918949,0.00007096639],"about_ca_topic_score_codex":0.0004637445,"about_ca_topic_score_gemma":0.0018375842,"teacher_disagreement_score":0.375144,"about_ca_system_score_codex":0.000012197265,"about_ca_system_score_gemma":0.000009453191,"threshold_uncertainty_score":0.17567661},"labels":[],"label_agreement":null},{"id":"W2954996093","doi":"10.1186/s12870-019-1873-0","title":"CRISPR/Cas9 editing of three CRUCIFERIN C homoeologues alters the seed protein profile in Camelina sativa","year":2019,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Lipid metabolism and biosynthesis","field":"Biochemistry, Genetics and Molecular Biology","cited_by":70,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Global Institute for Water Security; University of Saskatchewan; Agriculture and Agri-Food Canada","funders":"Agriculture and Agri-Food Canada","keywords":"Biology; Storage protein; Camelina sativa; Camelina; Amino acid; Food science; Isoleucine; Biochemistry; Gene; Leucine; Crop; Agronomy","score_opus":0.01362885136047074,"score_gpt":0.22781520443972353,"score_spread":0.2141863530792528,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2954996093","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99773943,0.0004931947,0.00011469664,0.00011100635,0.00030948076,0.00057705183,0.00016341779,0.000012009247,0.00047972886],"genre_scores_gemma":[0.99784327,0.0000336045,0.001161131,0.00009579975,0.00039622493,0.000052156967,0.00024503114,0.000014534157,0.00015826113],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9987248,0.00018641159,0.0003299827,0.00036523025,0.00006935434,0.00032420806],"domain_scores_gemma":[0.9993075,0.00006224832,0.00017622137,0.00038053386,0.000038418075,0.000035087203],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00038044798,0.00017687386,0.00029514707,0.00006159359,0.000042466498,0.0000069813873,0.00033519362,0.00023943954,0.000035732515],"category_scores_gemma":[0.00017377318,0.00011235744,0.00007028282,0.000082820174,0.0001490023,0.000004054767,0.00018399056,0.000119708435,0.00003252723],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000154745,0.000038341233,0.11510714,0.000049784085,0.000024668294,9.506728e-7,0.00006202094,0.0000032732876,0.88341296,0.00026879765,0.00013414519,0.0007431451],"study_design_scores_gemma":[0.0005355073,0.000258796,0.0623558,0.000046573878,0.000012364559,0.00001770474,0.000235059,0.00006674462,0.9225228,0.00007589182,0.0136650205,0.00020774225],"about_ca_topic_score_codex":0.00016498608,"about_ca_topic_score_gemma":0.0007185107,"teacher_disagreement_score":0.05275134,"about_ca_system_score_codex":0.0000068072354,"about_ca_system_score_gemma":0.00008346364,"threshold_uncertainty_score":0.45818034},"labels":[],"label_agreement":null},{"id":"W2955411493","doi":"10.1186/s12870-019-1902-z","title":"Transcriptomic response in symptomless roots of clubroot infected kohlrabi (Brassica oleracea var. gongylodes) mirrors resistant plants","year":2019,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Plant Disease Resistance and Genetics","field":"Agricultural and Biological Sciences","cited_by":55,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Agriculture and Agri-Food Canada; Vetenskapsrådet; Austrian Science Fund; Svenska Forskningsrådet Formas","keywords":"Biology; Clubroot; Brassica oleracea; Brassica; Botany; Transcriptome; Horticulture; Gene; Gene expression; Genetics","score_opus":0.020975642885065458,"score_gpt":0.23489455382614424,"score_spread":0.2139189109410788,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2955411493","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99515325,0.00061082194,0.0000026879702,0.00016319792,0.00022546944,0.00042873557,0.0030870992,0.00005536218,0.00027335246],"genre_scores_gemma":[0.9986114,0.00021589421,0.000046790577,0.00011096224,0.000039134586,0.00001974055,0.00079759234,0.000002767834,0.00015570055],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99758387,0.00058177183,0.00055107824,0.00052965386,0.00017378076,0.0005798777],"domain_scores_gemma":[0.9984181,0.0010472913,0.00019927279,0.00015315093,0.000039353898,0.00014281095],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00044093098,0.00027860582,0.00056298036,0.00008271604,0.00006312009,0.00001731202,0.00041847696,0.00032396917,0.00019279894],"category_scores_gemma":[0.000073377996,0.00012821451,0.00014198593,0.00033979228,0.000104656734,0.000061514096,0.000055273274,0.00018544686,0.000083980296],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0065212566,0.0001535379,0.2103774,0.000035034314,0.000020743755,0.00001788122,0.000040045637,0.000013245897,0.78210515,0.00012994178,0.00012843811,0.00045730785],"study_design_scores_gemma":[0.0008335835,0.00060851715,0.97189,0.00014941808,0.0000136439285,0.000018034734,0.0001491844,0.00011870286,0.018319685,0.00023915594,0.007312184,0.00034789674],"about_ca_topic_score_codex":0.0002925454,"about_ca_topic_score_gemma":0.009841971,"teacher_disagreement_score":0.7637855,"about_ca_system_score_codex":0.00004898032,"about_ca_system_score_gemma":0.00007568565,"threshold_uncertainty_score":0.54920506},"labels":[],"label_agreement":null},{"id":"W2955930464","doi":"10.1186/s12870-019-1882-z","title":"Ethylene-mediated improvement in sucrose accumulation in ripening sugarcane involves increased sink strength","year":2019,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Sugarcane Cultivation and Processing","field":"Agricultural and Biological Sciences","cited_by":72,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ministry of Agriculture","funders":"Science and Technology Major Project of Guangxi; Guangxi University; National Natural Science Foundation of China","keywords":"Sucrose; Biology; Sugar; Carbohydrate metabolism; Biochemistry; Transcriptome; Sucrose synthase; Ethylene; Gene; Ripening; Carbohydrate; Gene expression; Botany; Invertase","score_opus":0.04741056245948941,"score_gpt":0.2686697126102773,"score_spread":0.22125915015078787,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2955930464","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99898034,0.000116096584,7.8426746e-7,0.00016361434,0.000109137865,0.00025801684,0.000079960824,0.000041072566,0.0002509924],"genre_scores_gemma":[0.99766105,0.000030108533,0.00007779123,0.00022335043,0.00007055701,0.000016659154,0.0018611556,0.0000010536571,0.0000582642],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9987902,0.00015892759,0.0003254032,0.00032956974,0.0000840941,0.000311785],"domain_scores_gemma":[0.99908066,0.0006692973,0.00012175442,0.000046192272,0.000027069904,0.00005502032],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00037857864,0.00013925122,0.0002123347,0.000058883492,0.000047096797,0.000027822029,0.0001547285,0.00017729476,0.0003429666],"category_scores_gemma":[0.00015044208,0.00006186367,0.000030322115,0.00036920802,0.000031798558,0.00010724979,0.000052995114,0.00015731061,0.000037270624],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009323136,0.000039069582,0.5834598,0.000008025723,0.0000016496782,0.0000024133228,0.00008718898,0.000011391894,0.40775394,0.00007403155,0.000006863018,0.008462388],"study_design_scores_gemma":[0.0013000665,0.0002776605,0.9746165,0.00007249099,0.0000022161944,0.000004947713,0.0007215489,0.0022536144,0.01679472,0.00022512229,0.0034542659,0.00027683738],"about_ca_topic_score_codex":0.0035513572,"about_ca_topic_score_gemma":0.018500252,"teacher_disagreement_score":0.3911567,"about_ca_system_score_codex":0.00005250519,"about_ca_system_score_gemma":0.00002960352,"threshold_uncertainty_score":0.99940956},"labels":[],"label_agreement":null},{"id":"W2966328271","doi":"10.1186/s12870-019-1889-5","title":"Outlook for coeliac disease patients: towards bread wheat with hypoimmunogenic gluten by gene editing of α- and γ-gliadin gene families","year":2019,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Celiac Disease Research and Management","field":"Medicine","cited_by":96,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"FP7 People: Marie-Curie Actions; Institute of Genetics; Biotechnology and Biological Sciences Research Council; Institute of Genetics and Developmental Biology, Chinese Academy of Sciences; Chinese Academy of Sciences","keywords":"Biology; Gliadin; Epitope; Gluten; Gene; Genetics; CRISPR; Immunogenicity; Endosperm; Cas9; Population; Antibody; Food science","score_opus":0.013183286708212212,"score_gpt":0.25303289459455347,"score_spread":0.23984960788634127,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2966328271","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99031,0.003527506,0.00039710934,0.0001913676,0.00012004482,0.0013871713,0.0038028616,0.000028859853,0.00023506752],"genre_scores_gemma":[0.98911476,0.0015969685,0.0011817343,0.00031384584,0.00013834631,0.00016238158,0.0065625217,0.000028285891,0.00090118364],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9988131,0.00004389718,0.00023864304,0.00034685395,0.00016640007,0.00039109337],"domain_scores_gemma":[0.9991979,0.00009218845,0.00008682902,0.00026311938,0.000119334145,0.00024065521],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015110873,0.00017105542,0.00037663625,0.000108165375,0.00004208815,0.000008982461,0.00009309956,0.00006315771,0.000035038047],"category_scores_gemma":[0.000095390234,0.00012101722,0.000078613586,0.00006398029,0.00012265978,0.00004339198,0.000106467625,0.000063800646,0.000009107843],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.009729843,0.00064756593,0.8883299,0.0015733083,0.0005897762,0.000019060952,0.00009084583,0.0000055299793,0.06466297,0.00023521166,0.017685363,0.016430596],"study_design_scores_gemma":[0.041983414,0.010985841,0.77074873,0.0007627418,0.0015231624,0.00006387363,0.0008554059,0.0023980371,0.041483186,0.0002701273,0.1276468,0.0012786525],"about_ca_topic_score_codex":0.00018210684,"about_ca_topic_score_gemma":0.00002678734,"teacher_disagreement_score":0.11758117,"about_ca_system_score_codex":0.000041225772,"about_ca_system_score_gemma":0.00013837461,"threshold_uncertainty_score":0.49349388},"labels":[],"label_agreement":null},{"id":"W2967155443","doi":"10.1186/s12870-019-1963-z","title":"Improving salt tolerance in potato through overexpression of AtHKT1 gene","year":2019,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Potato Plant Research","field":"Agricultural and Biological Sciences","cited_by":49,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Agriculture and Agri-Food Canada","funders":"National Natural Science Foundation of China","keywords":"Biology; Gene; Biotechnology; Genetics; Agronomy; Botany","score_opus":0.03068769618699608,"score_gpt":0.25634605220765055,"score_spread":0.22565835602065448,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2967155443","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9984706,0.0002897655,0.000009222565,0.000046471425,0.000090394715,0.00022656484,0.00032213965,0.000021003036,0.00052382826],"genre_scores_gemma":[0.9988091,0.000076830394,0.00059744844,0.000070747716,0.00006493024,0.000008813048,0.00025615716,7.2125727e-7,0.00011526191],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9988127,0.00013376845,0.00026067393,0.00031432425,0.00010940639,0.0003691745],"domain_scores_gemma":[0.99934256,0.0004097141,0.00011031698,0.00007287734,0.000023321587,0.00004122898],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00023576984,0.00011048906,0.00024769045,0.00001640117,0.000029700826,0.000008114213,0.00029426772,0.00014821667,0.0002508593],"category_scores_gemma":[0.000054021613,0.000040677372,0.000047406924,0.00016117074,0.00004634642,0.00007741819,0.00013433152,0.00013836448,0.00006450163],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010667392,0.0000308839,0.18827973,0.000014976214,0.0000017942349,0.0000025232011,0.000025969726,0.0000067933956,0.80920124,0.0003076355,0.00006180614,0.0019599819],"study_design_scores_gemma":[0.00073912175,0.00064638234,0.49273512,0.00015501246,0.0000029888956,0.00007463819,0.000104529354,0.001660091,0.4946983,0.00082495715,0.007987705,0.0003711537],"about_ca_topic_score_codex":0.0023515327,"about_ca_topic_score_gemma":0.0010342305,"teacher_disagreement_score":0.31450292,"about_ca_system_score_codex":0.000018832385,"about_ca_system_score_gemma":0.000019232966,"threshold_uncertainty_score":0.355483},"labels":[],"label_agreement":null},{"id":"W2968159277","doi":"10.1186/s12870-019-1924-6","title":"Comparative secretome analysis of different smut fungi and identification of plant cell death-inducing secreted proteins from Tilletia horrida","year":2019,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Fungal and yeast genetics research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":20,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ministry of Agriculture","funders":"National Natural Science Foundation of China-Yunnan Joint Fund; National Natural Science Foundation of China","keywords":"Biology; Effector; Gene; Nicotiana benthamiana; Virulence; Signal peptide; Microbiology; Smut; Secretory protein; Pathogen; Genetics; Botany; Peptide sequence; Cell biology","score_opus":0.023796768181709265,"score_gpt":0.2667059462071764,"score_spread":0.24290917802546716,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2968159277","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9944854,0.0008237935,0.00059560634,0.000005636822,0.00006575601,0.00035404277,0.0035456554,0.000004330365,0.00011979415],"genre_scores_gemma":[0.9937024,0.0002044439,0.00020037052,0.000007770345,0.0000340339,0.000017805494,0.005689422,0.0000077240475,0.0001360097],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9987319,0.0001725764,0.00036211993,0.00041771383,0.00011173038,0.00020392968],"domain_scores_gemma":[0.9992105,0.00008029316,0.00023094247,0.00032356763,0.000086037384,0.00006865384],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001413168,0.00015640049,0.0004522681,0.00017027657,0.00002727662,0.000008316795,0.00018253211,0.00019826666,0.00006008616],"category_scores_gemma":[0.000018144065,0.00012363683,0.00010144826,0.0001452379,0.00007852487,0.0000020717064,0.000146392,0.00009046795,0.0000066254715],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00024962475,0.00005134504,0.13860935,0.00004401223,0.0003396091,4.4263922e-7,0.00011972385,0.00007669087,0.86041754,0.000039316255,0.00001882256,0.000033537533],"study_design_scores_gemma":[0.00037550865,0.0003430146,0.11825136,0.000013081846,0.00013374348,0.0000018138986,0.000109122586,0.0040049944,0.87648237,0.000022312624,0.0001334473,0.00012920296],"about_ca_topic_score_codex":0.0002130251,"about_ca_topic_score_gemma":0.00024445748,"teacher_disagreement_score":0.020357981,"about_ca_system_score_codex":0.000008716862,"about_ca_system_score_gemma":0.00004947459,"threshold_uncertainty_score":0.5041763},"labels":[],"label_agreement":null},{"id":"W2971304113","doi":"10.1186/s12870-019-1888-6","title":"The cotton GhWIN2 gene activates the cuticle biosynthesis pathway and influences the salicylic and jasmonic acid biosynthesis pathways","year":2019,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Plant Surface Properties and Treatments","field":"Agricultural and Biological Sciences","cited_by":22,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Institute of Genetics; National Key Research and Development Program of China; Tsinghua University; Institute of Genetics and Developmental Biology, Chinese Academy of Sciences; Fundação de Apoio ao Desenvolvimento do Ensino, Ciência e Tecnologia do Estado de Mato Grosso do Sul; Chinese Academy of Sciences","keywords":"Biosynthesis; Biology; Metabolic pathway; Jasmonic acid; Biochemistry; Salicylic acid; Gene; Transcription factor; Cuticle (hair); Gene silencing; Cell biology; Genetics","score_opus":0.02201872263533291,"score_gpt":0.18456481833763788,"score_spread":0.16254609570230497,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2971304113","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99164665,0.004262711,1.4716689e-7,0.0030012527,0.00010434733,0.00035502543,0.0004735583,0.000039208426,0.000117111005],"genre_scores_gemma":[0.9967041,0.0028229363,0.000017544882,0.00027263092,0.000046409452,0.000030956955,0.000034561275,0.000001678788,0.00006915305],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9986518,0.0003036472,0.00019284018,0.0003474849,0.00009821048,0.00040599515],"domain_scores_gemma":[0.9973983,0.002270941,0.00011732761,0.00013405681,0.000019070623,0.000060291684],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003985547,0.00021186532,0.00021300477,0.00000803017,0.0008306673,0.00012847973,0.0003750738,0.00012162844,0.00003170576],"category_scores_gemma":[0.00009156734,0.00004463616,0.000059433933,0.000121190424,0.0003509865,0.00007165894,0.00019025046,0.0001105991,0.00004690554],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000102101854,0.000023294044,0.13900737,0.0000038917997,0.00005848796,0.0000012990513,0.000116267205,5.5425284e-7,0.82849973,0.000403695,0.000035668163,0.031747635],"study_design_scores_gemma":[0.0002850251,0.00056396803,0.46519125,0.000038398295,0.000061254024,0.00014612525,0.0028931017,0.00024721556,0.4855364,0.001108579,0.04353566,0.0003930201],"about_ca_topic_score_codex":0.0005944153,"about_ca_topic_score_gemma":0.0009813021,"teacher_disagreement_score":0.34296334,"about_ca_system_score_codex":0.000011855372,"about_ca_system_score_gemma":0.000013501917,"threshold_uncertainty_score":0.63889056},"labels":[],"label_agreement":null},{"id":"W2973147610","doi":"10.1186/s12870-019-2013-6","title":"Using a transcriptome sequencing approach to explore candidate resistance genes against stemphylium blight in the wild lentil species Lens ervoides","year":2019,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Genetic and Environmental Crop Studies","field":"Agricultural and Biological Sciences","cited_by":37,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"Saskatchewan Pulse Growers; Western Grains Research Foundation","keywords":"Biology; Transcriptome; Blight; Gene; Resistance (ecology); Candidate gene; Genetics; Biotechnology; Botany; Agronomy; Gene expression","score_opus":0.12902787709633562,"score_gpt":0.2328001446093465,"score_spread":0.10377226751301089,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2973147610","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9952858,0.00080217514,0.000020987005,0.00028977438,0.00012398142,0.00033731596,0.00019052914,0.000016508498,0.002932907],"genre_scores_gemma":[0.9981069,0.00036743758,0.00041006945,0.0004477701,0.00010152382,0.00002679316,0.000119634606,0.0000013522751,0.00041854038],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9988034,0.00014517059,0.00021067633,0.0003610063,0.000109636945,0.00037015183],"domain_scores_gemma":[0.9997391,0.00008231151,0.000052909556,0.00008409833,0.000007237997,0.000034337994],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00020900207,0.00017249936,0.00023730016,0.00002037658,0.00016281361,0.000029275327,0.00030190425,0.000076783675,0.000017544477],"category_scores_gemma":[0.00000590341,0.00005935377,0.00006388585,0.00018544405,0.00009135047,0.000049099024,0.00006884486,0.000084584244,0.000025632937],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000056874396,0.000034821544,0.1264354,0.000021215259,0.000010916121,0.000002681091,0.0011196713,0.00015071375,0.87158626,0.00012406115,0.00020334696,0.00025400714],"study_design_scores_gemma":[0.0006135902,0.00039947638,0.76518524,0.00014066709,0.00003799157,0.000045872795,0.048835386,0.00019835564,0.022542115,0.00016303988,0.16087523,0.00096302765],"about_ca_topic_score_codex":0.0002692921,"about_ca_topic_score_gemma":0.0032616158,"teacher_disagreement_score":0.84904414,"about_ca_system_score_codex":0.00004989988,"about_ca_system_score_gemma":0.000007341857,"threshold_uncertainty_score":0.24203765},"labels":[],"label_agreement":null},{"id":"W2981275409","doi":"10.1186/s12870-019-2059-5","title":"The interplay between miR156/SPL13 and DFR/WD40–1 regulate drought tolerance in alfalfa","year":2019,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Plant Molecular Biology Research","field":"Agricultural and Biological Sciences","cited_by":144,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Agriculture and Agri-Food Canada; Western University","funders":"Agriculture and Agri-Food Canada; Natural Sciences and Engineering Research Council of Canada","keywords":"Biology; Gene silencing; Transcription factor; Drought tolerance; Medicago sativa; Gene; Arabidopsis; Promoter; Cell biology; Gene expression; Botany; Biochemistry; Mutant","score_opus":0.018994719757696482,"score_gpt":0.2633791637866724,"score_spread":0.24438444402897594,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2981275409","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9964492,0.00074162206,0.0000020289167,0.0014663631,0.00015038718,0.00032738625,0.00026069928,0.00002863891,0.0005737132],"genre_scores_gemma":[0.9983233,0.00024944905,0.000041687974,0.0001937667,0.000105835315,0.000020141315,0.00038305693,0.00000123021,0.0006815181],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9982408,0.00039209437,0.00026161675,0.00045741376,0.00008690176,0.00056115806],"domain_scores_gemma":[0.9985526,0.00115945,0.00007699966,0.0001094963,0.00002134496,0.00008006426],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00058783067,0.00017060323,0.00028754858,0.00002284386,0.0001392904,0.000038241942,0.00047601789,0.00026475894,0.00005465029],"category_scores_gemma":[0.00007820315,0.000055995883,0.000052382544,0.00018316881,0.00022052221,0.000042731317,0.00023678754,0.00026791345,0.00015014895],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012884248,0.000012806149,0.6988774,0.000004593936,0.000013545817,0.000009265392,0.000021711425,7.0160394e-7,0.29162556,0.0006157471,0.00035101527,0.008338833],"study_design_scores_gemma":[0.00039079922,0.00042350194,0.90837824,0.000039092036,0.000004956508,0.000111217545,0.000068916605,0.00019326736,0.005719501,0.0011575121,0.0832383,0.00027471728],"about_ca_topic_score_codex":0.00027744353,"about_ca_topic_score_gemma":0.0033772823,"teacher_disagreement_score":0.28590605,"about_ca_system_score_codex":0.000018131734,"about_ca_system_score_gemma":0.000013983008,"threshold_uncertainty_score":0.22834457},"labels":[],"label_agreement":null},{"id":"W2982502083","doi":"10.1186/s12870-019-2028-z","title":"A lil3 chlp double mutant with exclusive accumulation of geranylgeranyl chlorophyll displays a lethal phenotype in rice","year":2019,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Photosynthetic Processes and Mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":24,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Key Research and Development Program of China; Institute of Genetics and Developmental Biology, Chinese Academy of Sciences; Chinese Academy of Sciences; Institute of Genetics; National Natural Science Foundation of China","keywords":"Biology; Phenotype; Mutant; Chlorophyll; Botany; Genetics; Gene","score_opus":0.022645752537384885,"score_gpt":0.2722934354038519,"score_spread":0.24964768286646705,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2982502083","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9955446,0.00015901816,0.0026420308,0.000021229946,0.0001454208,0.0004065804,0.000112421934,0.000009228928,0.0009594395],"genre_scores_gemma":[0.9988315,0.0000677233,0.00045018617,0.0000784875,0.00006886104,0.0000312972,0.00033743685,0.00001800484,0.0001164782],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9989192,0.000043046646,0.0002488068,0.00041244962,0.00007737128,0.00029916584],"domain_scores_gemma":[0.99942136,0.00003557756,0.00015994349,0.00028495007,0.00004638039,0.000051774994],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012927492,0.00018529453,0.00029008446,0.00007416527,0.000026169435,0.0000065734553,0.00020082461,0.0002196928,0.000033433473],"category_scores_gemma":[0.000017867489,0.00014131241,0.000053125666,0.0001212476,0.000053992484,0.000005887542,0.000095257914,0.000095178984,0.0000132058785],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0021122587,0.000094181945,0.004838519,0.00008136667,0.000027247928,0.0000058807937,0.00009323075,0.0001369923,0.9913731,0.0011411806,0.000002575112,0.00009341861],"study_design_scores_gemma":[0.0025644626,0.00085747475,0.0025699346,0.000048846523,0.000018255414,0.00008412652,0.00007400394,0.00048008424,0.9917941,0.00029857352,0.0009577163,0.0002524363],"about_ca_topic_score_codex":0.00013143737,"about_ca_topic_score_gemma":0.00017037135,"teacher_disagreement_score":0.0032868953,"about_ca_system_score_codex":0.000010716489,"about_ca_system_score_gemma":0.00012639492,"threshold_uncertainty_score":0.57625526},"labels":[],"label_agreement":null},{"id":"W2984255992","doi":"10.1186/s12870-019-2097-z","title":"WheatCRISPR: a web-based guide RNA design tool for CRISPR/Cas9-mediated genome editing in wheat","year":2019,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"CRISPR and Genetic Engineering","field":"Biochemistry, Genetics and Molecular Biology","cited_by":49,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Global Institute for Water Security; University of Saskatchewan; Agriculture and Agri-Food Canada; Plant Biotechnology Institute; National Research Council Canada","funders":"National Research Council Canada","keywords":"CRISPR; Guide RNA; Genome editing; Biology; Cas9; Computational biology; Genome; Gene; Genetics","score_opus":0.0146470907566736,"score_gpt":0.2937210696753137,"score_spread":0.2790739789186401,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2984255992","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.7630792,0.0012501191,0.2328257,0.0001379107,0.00073257415,0.0011149618,0.0004748996,0.00005409575,0.0003305178],"genre_scores_gemma":[0.98068255,0.0001051927,0.016047731,0.0004276491,0.0004921384,0.00017710472,0.0016983526,0.000046233003,0.00032302522],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9983235,0.00009852312,0.0003993399,0.0005422788,0.00006589953,0.00057047256],"domain_scores_gemma":[0.99925876,0.00018493747,0.00007433668,0.00034924923,0.000054889548,0.000077820034],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00047093298,0.00025705862,0.0003163017,0.00013193378,0.00004045775,0.000016067659,0.00024258348,0.00034341365,0.0000409171],"category_scores_gemma":[0.00023832795,0.00024406123,0.00011432597,0.00009405539,0.000036763897,0.0000033865413,0.00006644545,0.0001166524,0.00003871165],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002333096,0.000034470133,0.011577112,0.00006952577,0.0000228564,0.0000035105627,0.000015368003,0.0041291,0.98125684,0.00002647663,0.0023746563,0.00025677093],"study_design_scores_gemma":[0.006609074,0.0015369024,0.007014621,0.00008033739,0.00004400357,0.000059530576,0.000106720334,0.029888844,0.74522656,0.00006261968,0.20832862,0.0010421583],"about_ca_topic_score_codex":0.00003164341,"about_ca_topic_score_gemma":0.00014264454,"teacher_disagreement_score":0.23603027,"about_ca_system_score_codex":0.0000318884,"about_ca_system_score_gemma":0.00019221303,"threshold_uncertainty_score":0.9952528},"labels":[],"label_agreement":null},{"id":"W2988001624","doi":"10.1186/s12870-019-2034-1","title":"A novel miniature transposon-like element discovered in the coding sequence of a gene that encodes for 5-formyltetrahydrofolate in wheat","year":2019,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Chromosomal and Genetic Variations","field":"Agricultural and Biological Sciences","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Israel Science Foundation; University of Toronto; U.S. Department of Agriculture","keywords":"Biology; Transposable element; Gene; Genetics; DNA Transposable Elements; Sequence (biology); Coding region; Computational biology; Genome","score_opus":0.053190283536258806,"score_gpt":0.25047097813314634,"score_spread":0.19728069459688752,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2988001624","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99617577,0.000107842956,0.00006480985,0.0005181423,0.000104591956,0.0005219426,0.0024427965,0.0000042410434,0.000059847865],"genre_scores_gemma":[0.99830157,0.00005122235,0.0006561842,0.00013500122,0.0000372057,0.000048572107,0.0007387852,5.4016687e-7,0.00003092253],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9992315,0.000051580628,0.0002081284,0.0002123202,0.00006387702,0.00023258453],"domain_scores_gemma":[0.99944055,0.0004113943,0.000068010886,0.000050617677,0.000010870164,0.000018534245],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00023104885,0.000099460136,0.00018134226,0.00001673265,0.000035557907,0.000010116457,0.00023671745,0.00010319525,0.000036298],"category_scores_gemma":[0.000012221199,0.000033415756,0.000064842796,0.00015356869,0.000028317114,0.00003890004,0.000014825025,0.0000703609,0.0000020340972],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008390136,0.000073089155,0.09275748,0.000014602853,0.0000050114386,5.837486e-7,0.000419002,0.000042528613,0.9054234,0.00080288074,0.000006216229,0.00037130318],"study_design_scores_gemma":[0.002568788,0.0014386303,0.921728,0.00017422874,0.00003113137,0.00008038203,0.0018834717,0.004258093,0.05765633,0.0023683086,0.0072917193,0.0005208768],"about_ca_topic_score_codex":0.00044521652,"about_ca_topic_score_gemma":0.0148659935,"teacher_disagreement_score":0.84776706,"about_ca_system_score_codex":0.000015394293,"about_ca_system_score_gemma":0.000017244633,"threshold_uncertainty_score":0.82955736},"labels":[],"label_agreement":null},{"id":"W2990067977","doi":"10.1186/s12870-019-2130-2","title":"Auxin protects Arabidopsis thaliana cell suspension cultures from programmed cell death induced by the cellulose biosynthesis inhibitors thaxtomin A and isoxaben","year":2019,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Plant Disease Resistance and Genetics","field":"Agricultural and Biological Sciences","cited_by":27,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université du Québec à Trois-Rivières; Université de Sherbrooke","funders":"Natural Sciences and Engineering Research Council of Canada; Université de Sherbrooke","keywords":"Auxin; Biology; Programmed cell death; Elicitor; Arabidopsis thaliana; Cell wall; Cell biology; Intracellular; Cell culture; Arabidopsis; Biochemistry; Cellulose; Cell; Mutant; Enzyme; Apoptosis; Gene","score_opus":0.01819631906356242,"score_gpt":0.20909572530759282,"score_spread":0.1908994062440304,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2990067977","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9951423,0.001835467,6.0751125e-7,0.0004115081,0.00012578395,0.00092023343,0.0011446867,0.000056219822,0.00036320178],"genre_scores_gemma":[0.99809974,0.00022358923,0.00008441009,0.00019400504,0.00013327485,0.00004840444,0.0008510299,0.000002685209,0.0003628316],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99829537,0.0002746878,0.00024455,0.0005716994,0.00014794676,0.0004657649],"domain_scores_gemma":[0.99903625,0.0004906848,0.00016547099,0.00012796107,0.000028212227,0.00015142509],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00017736653,0.0002824601,0.00031319304,0.00001626034,0.00016369675,0.00007534463,0.00032507736,0.00030996616,0.00010373621],"category_scores_gemma":[0.000029378107,0.00009480489,0.00010140342,0.00015840704,0.00007257121,0.000044987228,0.00011326006,0.00017098832,0.00009385996],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000148336,0.0001113909,0.024542915,0.000018576062,0.000014548146,0.0000064058136,0.00006764948,2.3242177e-7,0.97072875,0.000017064416,0.002173483,0.0021706144],"study_design_scores_gemma":[0.00044917822,0.00041083014,0.053865388,0.00004986529,0.000055961606,0.000010793255,0.0005844601,0.00006703571,0.9256641,0.00033972829,0.018026726,0.0004759076],"about_ca_topic_score_codex":0.0014244069,"about_ca_topic_score_gemma":0.0018189569,"teacher_disagreement_score":0.045064658,"about_ca_system_score_codex":0.000017393197,"about_ca_system_score_gemma":0.000022835842,"threshold_uncertainty_score":0.38660312},"labels":[],"label_agreement":null},{"id":"W2991323312","doi":"10.1186/s12870-019-2125-z","title":"PI signal transduction and ubiquitination respond to dehydration stress in the red seaweed Gloiopeltis furcata under successive tidal cycles","year":2019,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Marine and coastal plant biology","field":"Earth and Planetary Sciences","cited_by":50,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Cape Breton University","funders":"Polit National Laboratory for Marine Science and Technology; National Natural Science Foundation of China","keywords":"Biology; Gene; Ubiquitin ligase; Transcription factor; Cell biology; Biochemistry; Botany; Ubiquitin","score_opus":0.017261129725835368,"score_gpt":0.2279231882886027,"score_spread":0.21066205856276732,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2991323312","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9946555,0.00006803479,0.000324446,0.00090312224,0.00015756606,0.00035221316,0.00052827125,0.000016181833,0.0029946766],"genre_scores_gemma":[0.9961731,0.000028436305,0.0000770951,0.00034334845,0.00009596321,0.0000038918733,0.0029050293,0.0000018801917,0.0003712596],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9988429,0.00034026208,0.00019625293,0.00030294925,0.00008206223,0.00023558275],"domain_scores_gemma":[0.99939483,0.00036959324,0.0000643605,0.00010776978,0.000018555163,0.000044903674],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00035914095,0.00011905278,0.00015208582,0.00013277044,0.000071238515,0.00003602269,0.00017026122,0.00012932702,0.000565368],"category_scores_gemma":[0.000024205021,0.00007879047,0.000019826017,0.00015282659,0.00004797802,0.00012867236,0.00001603515,0.000119043696,0.00006271422],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0011010426,0.00003048112,0.93373895,0.000034439945,0.000014785694,0.000012097969,0.0005998594,0.001233757,0.017179793,0.0015337375,0.00018761601,0.044333458],"study_design_scores_gemma":[0.0007365601,0.0007474463,0.98279357,0.000024874365,0.000014352803,0.00014185444,0.0014007436,0.0053055584,0.0021285298,0.0012205172,0.0052082255,0.00027774446],"about_ca_topic_score_codex":0.008628567,"about_ca_topic_score_gemma":0.11711629,"teacher_disagreement_score":0.10848772,"about_ca_system_score_codex":0.0000041638013,"about_ca_system_score_gemma":0.000035825342,"threshold_uncertainty_score":0.9979731},"labels":[],"label_agreement":null},{"id":"W2991462197","doi":"10.1186/s12870-019-2141-z","title":"Transcriptional profiling of long noncoding RNAs associated with leaf-color mutation in Ginkgo biloba L","year":2019,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Plant Molecular Biology Research","field":"Agricultural and Biological Sciences","cited_by":44,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"Special Fund for Forest Scientific Research in the Public Welfare; National Key Research and Development Program of China; Priority Academic Program Development of Jiangsu Higher Education Institutions; Government of Jiangsu Province","keywords":"Biology; Ginkgo; Ginkgo biloba; Mutant; Gene; Genetics; Long non-coding RNA; Exon; Computational biology; Botany; RNA","score_opus":0.03495926129376374,"score_gpt":0.2469463932304867,"score_spread":0.21198713193672297,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2991462197","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9986517,0.000079502475,0.000034625442,0.000121956036,0.00006916552,0.00037013605,0.0003294458,0.00002556565,0.00031790603],"genre_scores_gemma":[0.99771184,0.000012035353,0.00017904915,0.000047584428,0.000027340084,0.000017890294,0.0019361948,9.834265e-7,0.0000671047],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9987487,0.0002612606,0.00023384315,0.0003048045,0.00011690065,0.00033449844],"domain_scores_gemma":[0.99926656,0.00048862246,0.00011182425,0.0000387637,0.000054179643,0.00004005975],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00046546623,0.000118065225,0.00025348843,0.000046576857,0.00004128864,0.000008227323,0.00019459313,0.00021883787,0.00009178849],"category_scores_gemma":[0.00010175473,0.000046322424,0.00004792689,0.00028928043,0.00009227481,0.000048736976,0.000028942011,0.00017063522,0.000024492181],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00016283926,0.0000417337,0.43822935,0.0000059294634,0.000012045841,0.000013035105,0.0000124461585,0.00002623023,0.5607375,0.00035077464,0.0000031148732,0.0004050157],"study_design_scores_gemma":[0.00066643,0.0009617467,0.9402004,0.00007650909,0.000008049315,0.000081970196,0.000103004844,0.00078675954,0.05669939,0.00012935781,0.00009856057,0.00018785043],"about_ca_topic_score_codex":0.00015248117,"about_ca_topic_score_gemma":0.004334511,"teacher_disagreement_score":0.5040381,"about_ca_system_score_codex":0.00003721121,"about_ca_system_score_gemma":0.00003843014,"threshold_uncertainty_score":0.24187589},"labels":[],"label_agreement":null},{"id":"W2992389456","doi":"10.1186/s12870-019-2149-4","title":"Characterization of QTL and eQTL controlling early Fusarium graminearum infection and deoxynivalenol levels in a Wuhan 1 x Nyubai doubled haploid wheat population","year":2019,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Mycotoxins in Agriculture and Food","field":"Agricultural and Biological Sciences","cited_by":9,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Agriculture and Agri-Food Canada; National Research Council Canada","funders":"National Research Council Canada; Agriculture and Agri-Food Canada; Western Grains Research Foundation","keywords":"Quantitative trait locus; Biology; Doubled haploidy; Expression quantitative trait loci; Fusarium; Genetics; Population; Genotype; Mycotoxin; Gene; Allele; Biotechnology; Single-nucleotide polymorphism","score_opus":0.0203090040326902,"score_gpt":0.20815903223957508,"score_spread":0.18785002820688487,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2992389456","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9990361,0.00007130831,0.000020615984,0.000075690084,0.00013414548,0.00040647283,0.0001719288,0.000025144387,0.000058638376],"genre_scores_gemma":[0.99889904,0.0001009749,0.000035353285,0.00003643482,0.000098970515,0.000012056726,0.00076974137,8.767113e-7,0.000046544083],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99917454,0.000097734526,0.0002462809,0.00025043008,0.000054113287,0.00017693503],"domain_scores_gemma":[0.99965835,0.00010905722,0.00013374478,0.000033599023,0.000028548826,0.000036711917],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00016942123,0.00011914544,0.0002569101,0.000033629596,0.000048271955,0.00002342183,0.000049273865,0.00020256208,0.000017893615],"category_scores_gemma":[0.000019272014,0.00004898359,0.000028061717,0.00013910544,0.000026422616,0.00011291115,0.000035460707,0.00008693824,0.0000036118736],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000057653717,0.000017267737,0.43720794,0.0000129083155,0.0000038761714,1.9529598e-7,0.000038104157,5.592187e-7,0.5612303,0.00031277924,2.846032e-7,0.001118124],"study_design_scores_gemma":[0.00048123515,0.00040134194,0.9784775,0.000023282833,0.000007856084,0.000015675252,0.000018286506,0.00016133532,0.019921863,0.00016878633,0.00020506595,0.00011778925],"about_ca_topic_score_codex":0.00086273556,"about_ca_topic_score_gemma":0.00090062036,"teacher_disagreement_score":0.54130846,"about_ca_system_score_codex":0.000010658698,"about_ca_system_score_gemma":0.0000028621073,"threshold_uncertainty_score":0.19974928},"labels":[],"label_agreement":null},{"id":"W2995164054","doi":"10.1186/s12870-019-2174-3","title":"The in vivo impact of MsLAC1, a Miscanthus laccase isoform, on lignification and lignin composition contrasts with its in vitro substrate preference","year":2019,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Plant Gene Expression Analysis","field":"Biochemistry, Genetics and Molecular Biology","cited_by":35,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"Chinese Government Scholarship; China Scholarship Council; Deutsche Forschungsgemeinschaft","keywords":"Biology; Lignin; Laccase; Miscanthus; In vivo; Composition (language); Substrate (aquarium); Monolignol; In vitro; Biochemistry; Gene isoform; Botany; Biotechnology; Bioenergy; Enzyme; Biofuel; Biosynthesis; Gene; Ecology","score_opus":0.014214695598407778,"score_gpt":0.24944989585334637,"score_spread":0.2352352002549386,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2995164054","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9988509,0.00016019984,0.000021659498,0.000025699863,0.000021457718,0.00027041085,0.0003694773,0.0000035595303,0.00027662597],"genre_scores_gemma":[0.99911636,0.00027068346,0.000047797475,0.000021993934,0.000013716978,0.000019768153,0.00045042086,0.0000057895795,0.000053445387],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9990773,0.00015794266,0.00022501666,0.00028224228,0.00005312563,0.00020438203],"domain_scores_gemma":[0.9994686,0.00012334397,0.00014491286,0.00019180014,0.000030899504,0.00004044163],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002014892,0.00013311596,0.00020012562,0.00008702785,0.000024555362,0.0000099543095,0.00012209803,0.00013850238,0.0000037401826],"category_scores_gemma":[0.000028384276,0.0000805585,0.0000368445,0.000090075475,0.000052314103,0.000004229547,0.000027550761,0.000080626596,0.000003480825],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0020891153,0.000054993754,0.05685787,0.000009129238,0.000025904244,0.0000025760805,0.00002259436,0.00014873776,0.94055325,0.000037890713,0.00012434047,0.00007359264],"study_design_scores_gemma":[0.0009494483,0.00049929915,0.051288318,0.000038624636,0.000008077536,0.00003288002,0.000036146783,0.0011788785,0.945791,0.000007638103,0.000055839704,0.00011383543],"about_ca_topic_score_codex":0.00011860983,"about_ca_topic_score_gemma":0.0009614809,"teacher_disagreement_score":0.0055695516,"about_ca_system_score_codex":0.000016589507,"about_ca_system_score_gemma":0.00007646813,"threshold_uncertainty_score":0.32850802},"labels":[],"label_agreement":null},{"id":"W2995870846","doi":"10.1186/s12870-019-2160-9","title":"Investigations into a putative role for the novel BRASSIKIN pseudokinases in compatible pollen-stigma interactions in Arabidopsis thaliana","year":2019,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Plant Reproductive Biology","field":"Biochemistry, Genetics and Molecular Biology","cited_by":16,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Arizona Biomedical Research Commission; Natural Sciences and Engineering Research Council of Canada; National Natural Science Foundation of China","keywords":"Biology; Arabidopsis; Brassicaceae; Genetics; Arabidopsis thaliana; Gene; Pollen; Cell biology; Mutant; Botany","score_opus":0.03347815309838124,"score_gpt":0.29380801430058107,"score_spread":0.2603298612021998,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2995870846","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9946107,0.0005576484,0.0016418115,0.0007379123,0.0003757192,0.00086570776,0.0008717794,0.000013351504,0.00032532454],"genre_scores_gemma":[0.9942907,0.000057513105,0.0028973406,0.00030712798,0.00014184261,0.00028966073,0.0017364036,0.000015416063,0.00026397195],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99846804,0.00017930039,0.00033979714,0.00061661116,0.000044485205,0.00035174924],"domain_scores_gemma":[0.9988837,0.0005000237,0.00015206398,0.00035945053,0.00005703108,0.00004773027],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003236806,0.00020758761,0.00029022244,0.00018642074,0.000081183134,0.000012495883,0.0003068255,0.00016438597,0.000016894657],"category_scores_gemma":[0.00051567494,0.00015621717,0.00008037294,0.00020986435,0.00020814133,0.000009499806,0.00012467091,0.00017717932,0.000023224828],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00027328692,0.000120496145,0.26693884,0.00001556696,0.00004848811,8.0178756e-7,0.00017036915,0.00045292667,0.7291805,0.0020112686,0.0005226802,0.00026477975],"study_design_scores_gemma":[0.004561575,0.0011279953,0.52790105,0.0001179398,0.00006023713,0.00028591533,0.0028031615,0.006385319,0.3462987,0.0052062473,0.10420278,0.0010490726],"about_ca_topic_score_codex":0.0014859122,"about_ca_topic_score_gemma":0.017196221,"teacher_disagreement_score":0.38288182,"about_ca_system_score_codex":0.00005332699,"about_ca_system_score_gemma":0.00018921764,"threshold_uncertainty_score":0.95958954},"labels":[],"label_agreement":null},{"id":"W2996791590","doi":"10.1186/s12870-019-2198-8","title":"Genome-scale mining of root-preferential genes from maize and characterization of their promoter activity","year":2019,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Plant Molecular Biology Research","field":"Agricultural and Biological Sciences","cited_by":23,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Biotechnology Research Institute","funders":"","keywords":"Biology; Gene; Genome; Scale (ratio); Genetics; Root (linguistics); Computational biology","score_opus":0.028253260293202343,"score_gpt":0.22212832439592659,"score_spread":0.19387506410272423,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2996791590","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9973223,0.000067727895,0.000013977061,0.00004310744,0.00006535741,0.00020808115,0.0022190085,0.000010735254,0.00004971055],"genre_scores_gemma":[0.99785566,0.000054809705,0.000066159126,0.000008055979,0.00005456918,0.0000051494703,0.001918657,7.6225643e-7,0.00003617613],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9991578,0.00019580808,0.00015415394,0.00025983233,0.000051472074,0.00018097128],"domain_scores_gemma":[0.9995685,0.00017929585,0.00012902409,0.000058610727,0.000028961123,0.00003556875],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013101823,0.00010017132,0.00026150688,0.000017707063,0.000026844737,0.000005563887,0.00016504455,0.00018129869,0.00016907406],"category_scores_gemma":[0.000010090021,0.000038745093,0.00004139967,0.000064991145,0.00008907953,0.00003212596,0.00013587315,0.000062317864,0.0000065197523],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012607018,0.000024575898,0.33163926,0.000006891566,0.000013874442,2.2980332e-7,0.000023657214,5.4116647e-8,0.6649899,0.000004610469,4.4797918e-7,0.003170424],"study_design_scores_gemma":[0.00009862713,0.00018524153,0.6480857,0.000007421894,0.000003911631,0.000004698213,0.000013298327,0.00004112758,0.351208,0.000022134296,0.00027275365,0.000057068148],"about_ca_topic_score_codex":0.00013456742,"about_ca_topic_score_gemma":0.0005531487,"teacher_disagreement_score":0.31644645,"about_ca_system_score_codex":0.000003958469,"about_ca_system_score_gemma":0.000009797228,"threshold_uncertainty_score":0.18512423},"labels":[],"label_agreement":null},{"id":"W2998649238","doi":"10.1186/s12870-019-2213-0","title":"Identification and characterization of the TCA cycle genes in maize","year":2019,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Photosynthetic Processes and Mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":58,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ministry of Agriculture","funders":"National Key Research and Development Program of China","keywords":"Biology; Aconitase; Gene; Citric acid cycle; Malate dehydrogenase; Subcellular localization; Genetics; Isocitrate dehydrogenase; Nuclear gene; Biochemistry; Mitochondrion; Genome; Enzyme","score_opus":0.006043979160726726,"score_gpt":0.2088281976569949,"score_spread":0.20278421849626818,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2998649238","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9990885,0.000073433075,0.0003759293,0.0000327356,0.00013986655,0.00013648663,0.00007097658,0.000002086575,0.00007994219],"genre_scores_gemma":[0.9993747,0.00022199503,0.000021284059,0.000050780865,0.000018548455,0.000008628622,0.00012998759,0.0000036965114,0.00017040188],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99961406,0.00003289014,0.000112539135,0.00014231971,0.00002136607,0.000076804376],"domain_scores_gemma":[0.9997602,0.00000638008,0.00007320484,0.00013621827,0.000013432593,0.000010568922],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00008815893,0.000047989437,0.00007021308,0.000017719345,0.00001240802,0.0000029896182,0.000088031426,0.00008143582,0.000009258516],"category_scores_gemma":[0.00001562147,0.00003396594,0.000016530252,0.000033700402,0.000025536317,0.0000016505215,0.00005533324,0.000020980706,0.0000034300863],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000027643591,0.000011762991,0.012732882,0.000018965098,0.0000027740084,4.034964e-8,0.000011677964,7.967625e-7,0.9863954,0.00043183865,0.0000012206052,0.00036497982],"study_design_scores_gemma":[0.00016265285,0.000038702972,0.027889118,0.000008265506,0.0000028948732,0.000009842609,0.000013265653,0.00011239145,0.96991086,0.00027324603,0.0015335985,0.000045159504],"about_ca_topic_score_codex":0.000010676476,"about_ca_topic_score_gemma":0.000038987342,"teacher_disagreement_score":0.016484555,"about_ca_system_score_codex":0.0000021590404,"about_ca_system_score_gemma":0.000023910794,"threshold_uncertainty_score":0.13850908},"labels":[],"label_agreement":null},{"id":"W3006341312","doi":"10.1186/s12870-020-2245-5","title":"Comparative transcriptome analysis reveals the response mechanism of Cf-16-mediated resistance to Cladosporium fulvum infection in tomato","year":2020,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Plant-Microbe Interactions and Immunity","field":"Agricultural and Biological Sciences","cited_by":44,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"National Key Research and Development Program of China; Key Laboratory of Biology and Genetic Improvement of Horticultural Crops; Natural Science Foundation of Heilongjiang Province; Heilongjiang University","keywords":"Cladosporium; Biology; Jasmonic acid; Transcriptome; Plant disease resistance; Lycopersicon; Microbiology; Botany; Fungus; Alternaria; Plant defense against herbivory; Salicylic acid; Gene; Gene expression; Genetics; Aspergillus","score_opus":0.045140847584974095,"score_gpt":0.2629530158594539,"score_spread":0.2178121682744798,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3006341312","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9962223,0.000055351786,0.00012712849,0.0019929502,0.000092981216,0.00023377738,0.0011198422,0.00003086386,0.00012480038],"genre_scores_gemma":[0.99882686,0.000033271255,0.00004806124,0.0005553259,0.00003244086,0.000019440875,0.00039279732,5.474427e-7,0.000091270194],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9984672,0.00068205653,0.00035088087,0.00023452926,0.000063789834,0.00020156187],"domain_scores_gemma":[0.9988631,0.00081030035,0.00013713501,0.00006756731,0.00005528028,0.00006660977],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00042031487,0.00012335173,0.0003779852,0.000055197757,0.00009292096,0.000013393117,0.00022073534,0.00010872293,0.00014475272],"category_scores_gemma":[0.00014752468,0.000046739446,0.00011321346,0.0011870088,0.000046382596,0.000052595107,0.00003717782,0.0001683975,0.000037172114],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0017097511,0.000049672308,0.015684871,0.000004509408,0.000057397297,0.000001703803,0.00044187042,0.000014565472,0.98088455,0.00028141908,0.0008455059,0.000024178396],"study_design_scores_gemma":[0.00028480796,0.0007188042,0.8924799,0.000034772158,0.00008454702,0.000010498792,0.0008695763,0.00024334298,0.083074965,0.00025889638,0.021672675,0.0002671912],"about_ca_topic_score_codex":0.000951311,"about_ca_topic_score_gemma":0.028277308,"teacher_disagreement_score":0.89780957,"about_ca_system_score_codex":0.00003327421,"about_ca_system_score_gemma":0.000012865948,"threshold_uncertainty_score":0.9894541},"labels":[],"label_agreement":null},{"id":"W3008372718","doi":"10.1186/s12870-019-2177-0","title":"Genome-wide association mapping revealed syntenic loci QFhb-4AL and QFhb-5DL for Fusarium head blight resistance in common wheat (Triticum aestivum L.)","year":2020,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Mycotoxins in Agriculture and Food","field":"Agricultural and Biological Sciences","cited_by":36,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ministry of Agriculture","funders":"National Key Research and Development Program of China; Chinese Academy of Agricultural Sciences; Natural Science Foundation of Jiangsu Province; Government of Jiangsu Province; China Agricultural Research System; National Natural Science Foundation of China","keywords":"Biology; Genetics; Quantitative trait locus; Synteny; Genome-wide association study; Germplasm; Single-nucleotide polymorphism; Plant disease resistance; Population; Genotyping; Association mapping; Genetic association; Genotype; Genome; Gene; Agronomy","score_opus":0.035708505985468555,"score_gpt":0.2263171652911881,"score_spread":0.19060865930571952,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3008372718","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9841964,0.0018065295,0.00007203327,0.011616917,0.00014181003,0.0006715795,0.0008800579,0.000075672615,0.00053895696],"genre_scores_gemma":[0.99555117,0.00021723035,0.0005035071,0.0016433495,0.00046491207,0.00007625509,0.0012495272,0.0000019164631,0.00029215674],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9982569,0.0002071922,0.00042103528,0.00051330717,0.00010517747,0.0004963628],"domain_scores_gemma":[0.9985307,0.0010363722,0.00019053108,0.00005415039,0.000059550894,0.00012871462],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00038312393,0.0002174209,0.00047085434,0.000022480983,0.00016661565,0.000035721496,0.00023811389,0.00034802174,0.000022663255],"category_scores_gemma":[0.00041858703,0.000094528536,0.00009459158,0.00030563225,0.00004510167,0.000076605276,0.000087163455,0.00021690124,0.000014798173],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00037088952,0.000095165415,0.57849115,0.00010153276,0.000029434159,0.0000133916155,0.00025831748,0.0000012710466,0.41383767,0.000973117,0.005455682,0.00037239108],"study_design_scores_gemma":[0.00081805047,0.00057985587,0.8351528,0.00006330449,0.000029888257,0.00001343595,0.00024120226,0.000056591427,0.0018621247,0.0014340525,0.15928549,0.00046320123],"about_ca_topic_score_codex":0.00006014784,"about_ca_topic_score_gemma":0.006055351,"teacher_disagreement_score":0.41197553,"about_ca_system_score_codex":0.00008158882,"about_ca_system_score_gemma":0.000012289558,"threshold_uncertainty_score":0.3854762},"labels":[],"label_agreement":null},{"id":"W3010906869","doi":"10.1186/s12870-020-2327-4","title":"Transcriptome analysis of metabolic pathways associated with oil accumulation in developing seed kernels of Styrax tonkinensis, a woody biodiesel species","year":2020,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Lipid metabolism and biosynthesis","field":"Biochemistry, Genetics and Molecular Biology","cited_by":60,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"Doctorate Fellowship Foundation of Nanjing Forestry University; Priority Academic Program Development of Jiangsu Higher Education Institutions; National Natural Science Foundation of China; Nanjing Forestry University","keywords":"Biology; Transcriptome; Botany; Gene; De novo transcriptome assembly; Gene expression; Biochemistry","score_opus":0.06010860606554939,"score_gpt":0.2535255433576725,"score_spread":0.19341693729212314,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3010906869","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9971762,0.0009405614,0.0007289808,0.00007961437,0.00004301419,0.00008101397,0.000849782,0.000010962849,0.000089925736],"genre_scores_gemma":[0.99670166,0.00046692745,0.0010407967,0.00015564084,0.000058989117,0.000008070728,0.0015364675,0.000009856791,0.00002158064],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9986403,0.00017866217,0.00047405783,0.00035755007,0.000105414314,0.00024399636],"domain_scores_gemma":[0.9993235,0.000072173156,0.00027279873,0.00017616464,0.00010341345,0.000051987838],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002351901,0.00019143487,0.00069742836,0.00022946355,0.000024738725,0.000005307216,0.00019181767,0.00022294074,0.00001297487],"category_scores_gemma":[0.00022277681,0.00014574786,0.00014443521,0.00072328886,0.0001080337,0.0000056911863,0.000050189217,0.000060028073,9.5270735e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00027866752,0.000052558073,0.19188486,0.000028901914,0.0007239408,8.50661e-7,0.00029202164,0.00008771272,0.8059954,0.00043919907,0.0000065775644,0.00020928134],"study_design_scores_gemma":[0.00063022104,0.00009184954,0.39750665,0.000018707755,0.00036071183,7.3275106e-7,0.00012208107,0.00017358598,0.5975324,0.0000031498967,0.003381163,0.00017871356],"about_ca_topic_score_codex":0.000063915875,"about_ca_topic_score_gemma":0.0008343937,"teacher_disagreement_score":0.20846301,"about_ca_system_score_codex":0.000006386942,"about_ca_system_score_gemma":0.00013570108,"threshold_uncertainty_score":0.5943425},"labels":[],"label_agreement":null},{"id":"W3010999642","doi":"10.1186/s12870-020-2287-8","title":"Combined application of Ascophyllum nodosum extract and chitosan synergistically activates host-defense of peas against powdery mildew","year":2020,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Plant-Microbe Interactions and Immunity","field":"Agricultural and Biological Sciences","cited_by":44,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University","funders":"Mitacs","keywords":"Powdery mildew; Biology; Jasmonic acid; Salicylic acid; NPR1; NADPH oxidase; Peroxidase; Reactive oxygen species; Ascophyllum; Phenylalanine ammonia-lyase; Microbiology; Hydrogen peroxide; Botany; Biochemistry; Enzyme","score_opus":0.022916904330619978,"score_gpt":0.22100391904910544,"score_spread":0.19808701471848544,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3010999642","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99773943,0.00010393997,0.0000947031,0.00046746916,0.000054957938,0.00015448601,0.0009234236,0.00002607926,0.00043553364],"genre_scores_gemma":[0.99877536,0.00015810347,0.00020026292,0.00017120053,0.000057228834,0.000005767093,0.0006255289,0.000001016606,0.0000055240303],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9991765,0.000107596665,0.0002946851,0.00021335433,0.000048775684,0.0001591119],"domain_scores_gemma":[0.9990978,0.0005341089,0.00020187408,0.000058020752,0.000033668814,0.00007448554],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00006962988,0.0001235935,0.00028201472,0.0000149425,0.00006933397,0.000009039355,0.0001746541,0.00012102497,0.000032925527],"category_scores_gemma":[0.00014083306,0.000054281143,0.00006193093,0.00012237689,0.00013581829,0.000047244142,0.00007838983,0.0001270046,0.000005735555],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002797873,0.00010568334,0.01712633,0.000024060975,0.000019819863,8.9517135e-7,0.000027449081,0.0000010221966,0.9772864,0.0003387914,0.0000748477,0.0047149197],"study_design_scores_gemma":[0.00061950285,0.0018106533,0.47245622,0.000078124256,0.000044722052,0.00004282611,0.000433548,0.0011253585,0.5168312,0.00018872318,0.0059665926,0.00040251386],"about_ca_topic_score_codex":0.00031843578,"about_ca_topic_score_gemma":0.0001034064,"teacher_disagreement_score":0.46045518,"about_ca_system_score_codex":0.0000037203683,"about_ca_system_score_gemma":0.0000111057525,"threshold_uncertainty_score":0.22135207},"labels":[],"label_agreement":null},{"id":"W3011885080","doi":"10.1186/s12870-020-2303-z","title":"Potential function of CbuSPL and gene encoding its interacting protein during flowering in Catalpa bungei","year":2020,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Plant Molecular Biology Research","field":"Agricultural and Biological Sciences","cited_by":15,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Victoria","funders":"Chinese Academy of Forestry","keywords":"Biology; Arabidopsis; Ectopic expression; Bimolecular fluorescence complementation; Gene; Function (biology); Botany; Arabidopsis thaliana; Genetics; Transition (genetics); Cell biology; Mutant","score_opus":0.031262182884334334,"score_gpt":0.23012488018635277,"score_spread":0.19886269730201844,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3011885080","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99906224,0.00023660965,0.000024844996,0.00021471377,0.000063325344,0.00021625795,0.000110372406,0.000024001047,0.000047620873],"genre_scores_gemma":[0.9994476,0.000038942937,0.000090084264,0.000028838655,0.00011752285,0.0000126109735,0.000251832,9.0171955e-7,0.000011671823],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99899745,0.00014205779,0.00021800444,0.00031306094,0.000058208454,0.00027121883],"domain_scores_gemma":[0.99969965,0.000105642415,0.0000798247,0.000026152682,0.000020180665,0.00006852896],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001731938,0.00010578861,0.00019268053,0.000027123911,0.00006543968,0.0000115077155,0.00014177231,0.0001307582,0.000032501746],"category_scores_gemma":[0.00016625534,0.000049556493,0.000033092674,0.0001500467,0.000041673928,0.00005660671,0.00018905818,0.00017820045,0.0000071389786],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002936654,0.000012900603,0.028113915,0.000026933309,0.000008848446,0.000027782975,0.000033903263,0.000007694552,0.97015655,0.000025711413,0.0000016207922,0.0012904624],"study_design_scores_gemma":[0.00040156202,0.0004775083,0.18906252,0.00006970398,0.000007694579,0.000143674,0.00015735617,0.0012434063,0.80802894,0.000024643232,0.00016955937,0.00021346223],"about_ca_topic_score_codex":0.00011652483,"about_ca_topic_score_gemma":0.000412799,"teacher_disagreement_score":0.16212766,"about_ca_system_score_codex":0.000011246986,"about_ca_system_score_gemma":0.000008494368,"threshold_uncertainty_score":0.20208551},"labels":[],"label_agreement":null},{"id":"W3012694149","doi":"10.1186/s12870-019-2182-3","title":"A comparative gene co-expression analysis using self-organizing maps on two congener filmy ferns identifies specific desiccation tolerance mechanisms associated to their microhabitat preference","year":2020,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Plant Water Relations and Carbon Dynamics","field":"Environmental Science","cited_by":12,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Comisión Nacional de Investigación Científica y Tecnológica","keywords":"Desiccation tolerance; Desiccation; Biology; Epiphyte; Dehydration; Canopy; Botany; Phenylpropanoid; Gene; Adaptation (eye); Transcriptome; Gene expression; Genetics; Biochemistry","score_opus":0.06601562397422928,"score_gpt":0.257826831342938,"score_spread":0.1918112073687087,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3012694149","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9695039,0.00003047891,0.028745972,0.000040458035,0.00008622507,0.00027836757,0.0010179444,0.0000723125,0.0002243757],"genre_scores_gemma":[0.9901111,0.000024345603,0.0082192,0.00022457953,0.000028635299,0.000013572513,0.0013271056,0.00001033458,0.000041110477],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9985662,0.00023512621,0.00027685027,0.00051116804,0.0001322381,0.000278396],"domain_scores_gemma":[0.99941677,0.00011010154,0.00016851792,0.00017403072,0.000016602482,0.00011395661],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015294351,0.0002077063,0.00034648582,0.0000835386,0.00018290966,0.000049367605,0.0002504343,0.000110726185,0.0001405352],"category_scores_gemma":[0.000013662469,0.00016897726,0.00007062555,0.00048616703,0.00004406546,0.00008793361,0.00011799758,0.00012549215,0.00018434861],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000058238355,0.000048291673,0.039826967,0.0000021837,0.000080953854,0.0000026852476,0.0013522395,0.057496745,0.9008502,0.0000669082,0.00020040512,0.000014228198],"study_design_scores_gemma":[0.00070856314,0.00021151706,0.05489963,0.000039665843,0.00020177336,0.00001174631,0.00026857678,0.27261153,0.6691276,0.0005249583,0.0007176417,0.00067681033],"about_ca_topic_score_codex":0.000065614244,"about_ca_topic_score_gemma":0.00039160342,"teacher_disagreement_score":0.23172256,"about_ca_system_score_codex":0.00016618041,"about_ca_system_score_gemma":0.000013529029,"threshold_uncertainty_score":0.6890693},"labels":[],"label_agreement":null},{"id":"W3012714423","doi":"10.1186/s12870-020-2282-0","title":"Photosynthetic characteristics and chloroplast ultrastructure of welsh onion (Allium fistulosum L.) grown under different LED wavelengths","year":2020,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Garlic and Onion Studies","field":"Agricultural and Biological Sciences","cited_by":78,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ministry of Agriculture","funders":"","keywords":"Photosynthesis; Biology; Chlorophyll fluorescence; Allium fistulosum; Stomatal conductance; Photosynthetic efficiency; Chlorophyll; Chloroplast; Quenching (fluorescence); Transpiration; Horticulture; Botany; Photosystem II; Photochemistry; Fluorescence; Allium; Chemistry; Optics","score_opus":0.02324953055736981,"score_gpt":0.20203143662603867,"score_spread":0.17878190606866887,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3012714423","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99731416,0.000112740476,0.000027680519,0.0014184214,0.00016395596,0.00012818472,0.0007151817,0.00003409335,0.00008556199],"genre_scores_gemma":[0.9987305,0.00040493484,0.000029132725,0.00034394613,0.00018846463,0.0000059268737,0.0002619412,0.0000010920975,0.000034054814],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9990954,0.00007681725,0.00023939741,0.00028792996,0.000073478404,0.00022700567],"domain_scores_gemma":[0.9994192,0.000272724,0.0001250659,0.00003495432,0.000028406896,0.00011964724],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000047700847,0.00017679665,0.0003608265,0.00000764958,0.00010286727,0.0000120013565,0.00012694858,0.00013541622,0.00018017103],"category_scores_gemma":[0.00008114872,0.00006244501,0.000059397313,0.00006558952,0.00015094613,0.000020077347,0.00009428371,0.00011268394,0.000007941177],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00023703257,0.00006901816,0.302767,0.000060589042,0.000052082796,0.0000025841298,0.00022977238,3.842834e-7,0.68963385,0.001346428,0.00037783702,0.0052233976],"study_design_scores_gemma":[0.00021936416,0.00038470142,0.9856936,0.00001765582,0.00002258459,0.000021183178,0.0003388839,0.000057855555,0.008414762,0.00015035253,0.0045054476,0.0001736584],"about_ca_topic_score_codex":0.000057584453,"about_ca_topic_score_gemma":0.00026056977,"teacher_disagreement_score":0.68292654,"about_ca_system_score_codex":0.0000070489486,"about_ca_system_score_gemma":0.000006147419,"threshold_uncertainty_score":0.25464335},"labels":[],"label_agreement":null},{"id":"W3012737475","doi":"10.1186/s12870-020-2276-y","title":"The effects and interaction of soybean maturity gene alleles controlling flowering time, maturity, and adaptation in tropical environments","year":2020,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Soybean genetics and cultivation","field":"Agricultural and Biological Sciences","cited_by":31,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Agriculture and Agri-Food Canada","funders":"Agricultural Research Service; University of Missouri; United States Agency for International Development; Purdue University; U.S. Department of Agriculture","keywords":"Biology; Allele; Genotype; Germplasm; Gene; Adaptation (eye); Genetic architecture; Temperate climate; Phenology; Agronomy; Genetics; Phenotype; Horticulture; Botany","score_opus":0.0196875446129583,"score_gpt":0.20494166436491143,"score_spread":0.18525411975195313,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3012737475","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99916834,0.00037206785,0.000043425047,0.00022619867,0.000034017983,0.00012388595,0.000016829934,0.0000054597926,0.000009770812],"genre_scores_gemma":[0.9994229,0.00023240823,0.0001805351,0.000050241862,0.00005283616,0.000004584224,0.00005312728,4.1265673e-7,0.000002958858],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9995474,0.000079118036,0.00012888419,0.00012713576,0.00003369678,0.00008376375],"domain_scores_gemma":[0.9995793,0.00031894416,0.00005702805,0.000013883201,0.0000037009208,0.000027150343],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00006545335,0.000056262514,0.000098550605,0.0000040532195,0.00005394491,0.0000126692685,0.000041319534,0.000058260895,0.000003587841],"category_scores_gemma":[0.00006139433,0.000021648677,0.0000137792495,0.000027530396,0.000038157952,0.000020955533,0.000035877078,0.000055516983,0.0000012236359],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014081968,0.000011898871,0.039584585,0.0000079813,0.0000057542425,4.852849e-7,0.00009592323,0.000005574598,0.9502708,0.00009997337,0.0000065416843,0.009769714],"study_design_scores_gemma":[0.00042444392,0.00036017134,0.9550702,0.000016671162,0.000007863924,0.0000056413314,0.00021015656,0.017763669,0.024993626,0.0003675774,0.000689523,0.00009048124],"about_ca_topic_score_codex":0.000026070431,"about_ca_topic_score_gemma":0.00016789674,"teacher_disagreement_score":0.9252771,"about_ca_system_score_codex":0.000004244238,"about_ca_system_score_gemma":0.0000012209746,"threshold_uncertainty_score":0.08828074},"labels":[],"label_agreement":null},{"id":"W3013156965","doi":"10.1186/s12870-020-2235-7","title":"Sequential Paleotetraploidization shaped the carrot genome","year":2020,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Chromosomal and Genetic Variations","field":"Agricultural and Biological Sciences","cited_by":9,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Agriculture and Agri-Food Canada","funders":"Natural Science Foundation of Hebei Province; Ministry of Science and Technology of the People's Republic of China; National Natural Science Foundation of China","keywords":"Biology; Genome; Daucus carota; Gene duplication; Functional divergence; Genomics; Gene; Comparative genomics; Genetics; Evolutionary biology; Botany; Gene family","score_opus":0.05527868608424777,"score_gpt":0.22059284472871002,"score_spread":0.16531415864446225,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3013156965","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9936378,0.00014336001,0.00011016644,0.0050832606,0.00011598878,0.00017019041,0.0003732677,0.000057668112,0.0003083185],"genre_scores_gemma":[0.99757504,0.0000295187,0.00005392943,0.0009875976,0.00061518705,0.000010935573,0.0006955066,4.090621e-7,0.000031852782],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9994064,0.000090354,0.0001224255,0.0001819316,0.000048306247,0.00015055785],"domain_scores_gemma":[0.9997365,0.00011363899,0.000043783002,0.00002737535,0.000020786278,0.00005792824],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000055843997,0.00007390901,0.00008518114,0.000002718691,0.00016164656,0.000021660546,0.00018974696,0.00007115375,0.00060341],"category_scores_gemma":[0.00004421239,0.000021872154,0.00004870962,0.00015249616,0.000039371313,0.000017956649,0.000049113933,0.000060032155,0.000098560646],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000019188774,0.000012126452,0.013969334,0.0000018738955,0.000008779802,0.0000010290674,0.00011793088,0.000016104561,0.98311377,0.0018124793,0.00006163707,0.0008657798],"study_design_scores_gemma":[0.00046913835,0.0008452538,0.7153012,0.0000053196827,0.00005345087,0.000053951102,0.00034520085,0.002671494,0.0061865407,0.0023798952,0.271205,0.00048349486],"about_ca_topic_score_codex":0.000067868816,"about_ca_topic_score_gemma":0.00078648387,"teacher_disagreement_score":0.9769272,"about_ca_system_score_codex":0.000004569745,"about_ca_system_score_gemma":0.000009963734,"threshold_uncertainty_score":0.6606917},"labels":[],"label_agreement":null},{"id":"W3015063761","doi":"10.1186/s12870-020-02355-x","title":"The barley stripe mosaic virus expression system reveals the wheat C2H2 zinc finger protein TaZFP1B as a key regulator of drought tolerance","year":2020,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Plant Stress Responses and Tolerance","field":"Agricultural and Biological Sciences","cited_by":52,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université du Québec à Montréal","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Biology; Regulator; Zinc finger; microRNA; Key (lock); Drought tolerance; Cell biology; Botany; Computational biology; Agronomy; Genetics; Transcription factor; Gene; Ecology","score_opus":0.022288859671703857,"score_gpt":0.21472999608626908,"score_spread":0.19244113641456523,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3015063761","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9927175,0.0021380282,0.000009715784,0.0022201273,0.00019548106,0.00063632685,0.001736367,0.00006802285,0.00027840515],"genre_scores_gemma":[0.99828035,0.00020040583,0.000054383218,0.00031764148,0.00034937577,0.000093117116,0.0001590592,0.0000019482416,0.00054371695],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9980112,0.00053966197,0.00043376768,0.00041387908,0.00019381224,0.00040770633],"domain_scores_gemma":[0.99856246,0.00083535264,0.00028660183,0.00015177266,0.0000496093,0.000114196715],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00029505734,0.00022154952,0.00037048702,0.000006854572,0.00044077545,0.000047680816,0.00067425665,0.00019181847,0.000053172338],"category_scores_gemma":[0.00017486117,0.00006126593,0.0001277937,0.00022066102,0.00016297457,0.00005734788,0.00014529254,0.00019164039,0.00004433143],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0010392069,0.00002234953,0.0018223486,0.0000417278,0.00001363197,0.000009546658,0.00007607172,0.000014750608,0.9898221,0.0017872773,0.003430071,0.0019209029],"study_design_scores_gemma":[0.0007511514,0.0010993038,0.025839988,0.00075326604,0.00003262519,0.00015122836,0.0005832806,0.0016626396,0.443564,0.00045397284,0.5244729,0.0006356749],"about_ca_topic_score_codex":0.0002833268,"about_ca_topic_score_gemma":0.00034794348,"teacher_disagreement_score":0.5462581,"about_ca_system_score_codex":0.00001599916,"about_ca_system_score_gemma":0.000025984313,"threshold_uncertainty_score":0.33901328},"labels":[],"label_agreement":null},{"id":"W3015318920","doi":"10.1186/s12870-020-02352-0","title":"Low red/far-red ratio as a signal promotes carbon assimilation of soybean seedlings by increasing the photosynthetic capacity","year":2020,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Photosynthetic Processes and Mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":93,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ministry of Agriculture","funders":"Program on Industrial Technology System of National Soybean","keywords":"Photosynthesis; Biology; Photosystem II; Chlorophyll; Shading; Chloroplast; Far-red; Chlorophyll a; Botany; Chlorophyll fluorescence; RuBisCO; Photosynthetic efficiency; Horticulture; Biochemistry; Red light","score_opus":0.016595461007960718,"score_gpt":0.21915953964247475,"score_spread":0.20256407863451403,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3015318920","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9943276,0.00010480088,0.003842819,0.0005052644,0.00007552847,0.00036067216,0.00023356923,0.00002360981,0.00052612275],"genre_scores_gemma":[0.998531,0.00004944804,0.00027671744,0.00054523395,0.0001334561,0.00002874425,0.00039714374,0.0000193314,0.00001896652],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9986932,0.00021319174,0.00030852016,0.00040693174,0.00010413435,0.00027400305],"domain_scores_gemma":[0.9993057,0.000078176825,0.0002356982,0.00021382394,0.000070705784,0.0000958597],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00032279865,0.00020460505,0.00025490494,0.000023802928,0.000089422356,0.000014040947,0.0002714803,0.0002460065,0.000026579035],"category_scores_gemma":[0.0003899915,0.00014985153,0.00008679248,0.00009091609,0.00013610031,0.0000037642087,0.00009755517,0.00012972178,0.0000021792507],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00031508986,0.000048465543,0.0005486784,0.000047074198,0.00003728709,7.2411746e-7,0.00014941973,0.000006776136,0.99853814,0.000100970436,0.000077671444,0.000129728],"study_design_scores_gemma":[0.00036346208,0.0005585078,0.00005610554,0.000025825766,0.000038224556,0.000049748713,0.00007482114,0.0030889222,0.99347186,0.00035457715,0.0017333557,0.00018459266],"about_ca_topic_score_codex":0.0001858137,"about_ca_topic_score_gemma":0.000055601708,"teacher_disagreement_score":0.0050662584,"about_ca_system_score_codex":0.000010093939,"about_ca_system_score_gemma":0.0001412934,"threshold_uncertainty_score":0.61107683},"labels":[],"label_agreement":null},{"id":"W3015674841","doi":"10.1186/s12870-020-2328-3","title":"Crystal structure of DRIK1, a stress-responsive receptor-like pseudokinase, reveals the molecular basis for the absence of ATP binding","year":2020,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Plant nutrient uptake and metabolism","field":"Agricultural and Biological Sciences","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Ministero dello Sviluppo Economico; Universidade Estadual de Campinas; Conselho Nacional de Desenvolvimento Científico e Tecnológico; Ontario Ministry of Economic Development and Innovation; Wellcome Trust; European Federation of Pharmaceutical Industries and Associations; Merck KGaA; Genome Canada; Fundação de Amparo à Pesquisa do Estado de São Paulo; Diamond Light Source; Novartis Pharma; Coordenação de Aperfeiçoamento de Pessoal de Nível Superior; Pfizer","keywords":"Biology; Protein kinase domain; Kinase; Cell biology; Phosphorylation; Biochemistry; Biotic stress; Abiotic stress; Protein kinase A; Gene","score_opus":0.027689920766428684,"score_gpt":0.23024902926895804,"score_spread":0.20255910850252937,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3015674841","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9846927,0.0012799728,0.000050874572,0.0017466842,0.00019554015,0.00045689137,0.01154639,0.000015427955,0.000015544627],"genre_scores_gemma":[0.9982038,0.00042392654,0.000201955,0.000558713,0.00016700062,0.000014143057,0.0003913674,0.0000012791993,0.000037771933],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9988763,0.0001776125,0.00030442688,0.0002625295,0.0001185481,0.00026058173],"domain_scores_gemma":[0.9977796,0.0017156913,0.00028188317,0.00008516966,0.00007746035,0.00006018692],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00018694834,0.0001486268,0.00031220086,0.000012322039,0.00013159982,0.000010488175,0.000502945,0.00013753686,0.00008587227],"category_scores_gemma":[0.0003887642,0.000042518717,0.00014964081,0.0002648217,0.00015300748,0.000030502362,0.00009344631,0.000111360256,0.000002409727],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00032713672,0.000014312655,0.005206131,0.000015139125,0.00003595212,0.0000010073269,0.00018970585,0.000008917469,0.9893915,0.0023807236,0.0013754717,0.0010540083],"study_design_scores_gemma":[0.00057177927,0.0008314304,0.035056975,0.00010081222,0.00011355106,0.000033492823,0.0020344655,0.00013087019,0.67462313,0.0006826453,0.285446,0.00037488324],"about_ca_topic_score_codex":0.00006061957,"about_ca_topic_score_gemma":0.000105924184,"teacher_disagreement_score":0.31476837,"about_ca_system_score_codex":0.0000057590382,"about_ca_system_score_gemma":0.000021576381,"threshold_uncertainty_score":0.1733863},"labels":[],"label_agreement":null},{"id":"W3022796465","doi":"10.1186/s12870-020-02401-8","title":"Genome-wide association mapping of Sclerotinia sclerotiorum resistance in soybean using whole-genome resequencing data","year":2020,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Plant pathogens and resistance mechanisms","field":"Agricultural and Biological Sciences","cited_by":66,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"Government of Canada; Génome Québec; Genome Canada","keywords":"Biology; Sclerotinia sclerotiorum; Genome-wide association study; Genome; Genetics; Sclerotinia; Association mapping; Genome size; Resistance (ecology); Computational biology; Botany; Gene; Agronomy; Single-nucleotide polymorphism; Genotype","score_opus":0.11305076706291929,"score_gpt":0.24186332331929042,"score_spread":0.1288125562563711,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3022796465","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99312836,0.00043698496,0.0002308416,0.0010951575,0.00009369871,0.000265404,0.004548597,0.00003944441,0.00016152555],"genre_scores_gemma":[0.9944413,0.00008013736,0.0023571053,0.00033251915,0.00021544384,0.000004322635,0.0025164552,0.000002131866,0.000050596802],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9981001,0.0002222936,0.0004952153,0.0005505298,0.00016362582,0.0004682328],"domain_scores_gemma":[0.99903846,0.00031086736,0.00038187046,0.00012760727,0.000047003683,0.00009421659],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008228903,0.00016601298,0.00038492228,0.00003462234,0.00013434007,0.000024797215,0.00062614965,0.0002053339,0.000041472227],"category_scores_gemma":[0.00040228598,0.00008168357,0.000054575215,0.00045597658,0.000040602295,0.00011352773,0.00025199106,0.0001762969,0.000014090749],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000052852938,0.000016898719,0.10149269,0.000025435642,0.000008269811,0.000008675798,0.00006639391,0.000019322299,0.89813584,0.000089316905,0.000036211535,0.00004808935],"study_design_scores_gemma":[0.000490267,0.00015601747,0.9720156,0.00019930291,0.000021866861,0.00000549374,0.000698399,0.00086987735,0.003951076,0.00054637715,0.020533241,0.00051247637],"about_ca_topic_score_codex":0.000114714974,"about_ca_topic_score_gemma":0.0059461887,"teacher_disagreement_score":0.89418477,"about_ca_system_score_codex":0.00009196471,"about_ca_system_score_gemma":0.000037153994,"threshold_uncertainty_score":0.33309594},"labels":[],"label_agreement":null},{"id":"W3026617684","doi":"10.1186/s12870-020-02448-7","title":"A novel insight into nitrogen and auxin signaling in lateral root formation in tea plant [Camellia sinensis (L.) O. Kuntze]","year":2020,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Plant Molecular Biology Research","field":"Agricultural and Biological Sciences","cited_by":62,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba","funders":"Earmarked Fund for Modern Agro-industry Technology Research System; Priority Academic Program Development of Jiangsu Higher Education Institutions","keywords":"Camellia sinensis; Biology; Auxin; Botany; Nitrogen; Biochemistry; Gene","score_opus":0.04062525392245287,"score_gpt":0.23783122005468518,"score_spread":0.19720596613223232,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3026617684","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99764425,0.00030405007,0.00003585144,0.0012590378,0.000032065007,0.00026490752,0.00037056857,0.00003232095,0.000056928908],"genre_scores_gemma":[0.99760765,0.00004600223,0.00029290072,0.0004727903,0.00006667622,0.00002010809,0.0014884553,0.0000013157616,0.000004110155],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9985221,0.00023369584,0.00033721895,0.00040055066,0.00008419439,0.00042221328],"domain_scores_gemma":[0.9994438,0.0003060021,0.000075438424,0.00003891265,0.000019586554,0.00011624661],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002602366,0.00017771387,0.00030875226,0.00006148245,0.000067099856,0.00002810638,0.0002217525,0.00026768577,0.000026552738],"category_scores_gemma":[0.0001346046,0.0000790435,0.000039333896,0.000312239,0.00008128331,0.00008816592,0.00016391455,0.000259789,0.000025815989],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00018983522,0.00003276763,0.22345416,0.000012893613,0.0000060070543,0.000055012126,0.00025536065,0.000008906453,0.77510875,0.00010789845,0.000031844833,0.0007365853],"study_design_scores_gemma":[0.0039402177,0.0023142337,0.69842273,0.00023851392,0.000029046427,0.0011257984,0.0006047799,0.019388055,0.2546527,0.0020262417,0.015638119,0.0016195712],"about_ca_topic_score_codex":0.0010467921,"about_ca_topic_score_gemma":0.016579913,"teacher_disagreement_score":0.520456,"about_ca_system_score_codex":0.000030819574,"about_ca_system_score_gemma":0.000016344105,"threshold_uncertainty_score":0.9251981},"labels":[],"label_agreement":null},{"id":"W3030564129","doi":"10.1186/s12870-020-02455-8","title":"QTL mapping of web blotch resistance in peanut by high-throughput genome-wide sequencing","year":2020,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Peanut Plant Research Studies","field":"Agricultural and Biological Sciences","cited_by":25,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ministry of Agriculture","funders":"Henan Academy of Agricultural Sciences; Agriculture Research System of China; Universita degli Studi di Bari Aldo Moro; National Natural Science Foundation of China","keywords":"Biology; Quantitative trait locus; Plant disease resistance; Genetic linkage; Genetics; Population; Arachis hypogaea; Agronomy; Gene","score_opus":0.06338730372237154,"score_gpt":0.2369101166767668,"score_spread":0.17352281295439526,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3030564129","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99285334,0.0018204233,0.000015011072,0.0024752829,0.00004134494,0.00020530469,0.0014528469,0.00005381364,0.0010826155],"genre_scores_gemma":[0.996658,0.0008470425,0.00048259777,0.0004131858,0.00015519939,0.00001518418,0.0012878793,5.5360425e-7,0.00014033196],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9983294,0.00022350588,0.00037233104,0.0004382335,0.00014212345,0.0004943869],"domain_scores_gemma":[0.9988697,0.0008035637,0.00013593458,0.000056236302,0.0000366877,0.00009783584],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003375405,0.00016838657,0.00039901276,0.00002296435,0.00009088849,0.000012946043,0.00039148575,0.00011304784,0.000080936516],"category_scores_gemma":[0.00036326892,0.00007112023,0.000057627447,0.0003825895,0.00014642559,0.000056511537,0.00021275459,0.00019126687,0.00000766547],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000096225725,0.000019881334,0.09825019,0.00004646276,0.000016212094,0.00002241465,0.00017750723,0.0000024778287,0.89581233,0.00022051217,0.0051676617,0.00016812835],"study_design_scores_gemma":[0.0013624774,0.00092682143,0.6010135,0.00024802066,0.00001954807,0.000020456295,0.0023215273,0.00021923083,0.034996618,0.0016855228,0.3560702,0.0011160935],"about_ca_topic_score_codex":0.00053728174,"about_ca_topic_score_gemma":0.004494843,"teacher_disagreement_score":0.8608157,"about_ca_system_score_codex":0.00005817088,"about_ca_system_score_gemma":0.000034457535,"threshold_uncertainty_score":0.2900199},"labels":[],"label_agreement":null},{"id":"W3039626961","doi":"10.1186/s12870-020-02525-x","title":"Genetic analysis of loose smut (Ustilago tritici) resistance in Sonop spring wheat","year":2020,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Wheat and Barley Genetics and Pathology","field":"Agricultural and Biological Sciences","cited_by":19,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Agriculture and Agri-Food Canada","funders":"Agriculture and Agri-Food Canada; Genome Prairie; Western Grains Research Foundation; Ministry of Agriculture - Saskatchewan; Genome Canada","keywords":"Biology; Quantitative trait locus; Population; Smut; Locus (genetics); Doubled haploidy; Ustilago; Genetics; Botany; Gene","score_opus":0.03998385970448251,"score_gpt":0.2288286389146202,"score_spread":0.1888447792101377,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3039626961","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9967579,0.0017231533,0.000045412264,0.0006907129,0.000047760554,0.00009069665,0.00031278608,0.000015512967,0.00031602554],"genre_scores_gemma":[0.99835575,0.00028467146,0.00078085234,0.00031266638,0.00011699812,0.000005795718,0.00011116275,6.693199e-7,0.000031424694],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.998948,0.000120086675,0.0003041519,0.00031239743,0.00005272006,0.0002626585],"domain_scores_gemma":[0.9995899,0.00018862146,0.000068412744,0.000050840383,0.00002283644,0.000079352445],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00011677261,0.0001134387,0.0003816432,0.000039966093,0.00003638462,0.000007737919,0.00019991498,0.00014093949,0.00016579765],"category_scores_gemma":[0.00003498318,0.000049072132,0.00011204839,0.0005932516,0.000069198686,0.000011185639,0.00005491515,0.00008208949,0.000011125388],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011852601,0.000037676764,0.36575067,0.000015029246,0.000032246433,0.000011994114,0.00005741912,0.00004652286,0.6310487,0.00033282267,0.00009753607,0.0024509057],"study_design_scores_gemma":[0.00030955186,0.00035653907,0.9732197,0.000016208782,0.0001492397,0.0000031781601,0.00008097377,0.0009922166,0.012851353,0.00045296614,0.011319632,0.0002484259],"about_ca_topic_score_codex":0.00017861825,"about_ca_topic_score_gemma":0.013027834,"teacher_disagreement_score":0.6181973,"about_ca_system_score_codex":0.0000066692933,"about_ca_system_score_gemma":0.000010067092,"threshold_uncertainty_score":0.7269837},"labels":[],"label_agreement":null},{"id":"W3042993331","doi":"10.1186/s12870-020-02546-6","title":"Comparative transcriptomics analysis revealing flower trichome development during flower development in two Lonicera japonica Thunb. cultivars using RNA-seq","year":2020,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Plant Molecular Biology Research","field":"Agricultural and Biological Sciences","cited_by":42,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Lakehead University; University of Guelph","keywords":"Biology; Trichome; Japonica; Transcriptome; Jasmonic acid; Botany; Gene; Gibberellin; Gene expression; Genetics","score_opus":0.09648024496384565,"score_gpt":0.3087676600381761,"score_spread":0.2122874150743304,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3042993331","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99823934,0.00033846725,0.00028954857,0.00025952497,0.00009098299,0.00041620154,0.00017788795,0.00006599197,0.000122028854],"genre_scores_gemma":[0.9937066,0.000043055996,0.004686966,0.0002600457,0.000087433094,0.00003480905,0.0011460406,0.0000028933803,0.000032199252],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9967368,0.0005158734,0.0007632345,0.00088995957,0.00022088339,0.00087324984],"domain_scores_gemma":[0.9990828,0.00032956013,0.00016548265,0.00009105224,0.00007434475,0.0002567282],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005447819,0.00037122297,0.00085595314,0.00014185769,0.0003065812,0.000046829555,0.00059561746,0.00024439007,0.0001492244],"category_scores_gemma":[0.00008483564,0.00017963733,0.00017922033,0.0013661379,0.000110067675,0.0000790335,0.00021689662,0.00044423793,0.000055907687],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00053417514,0.00013338044,0.055451423,0.000014975922,0.00036398252,0.000060783917,0.0010410073,0.00056288624,0.941359,0.000025059451,0.000015647067,0.00043769658],"study_design_scores_gemma":[0.0046032476,0.00037202815,0.5416838,0.00015448751,0.00029506377,0.00015171673,0.0012071155,0.0140968645,0.4205242,0.00002740125,0.014351789,0.0025322975],"about_ca_topic_score_codex":0.00023637644,"about_ca_topic_score_gemma":0.010824884,"teacher_disagreement_score":0.5208348,"about_ca_system_score_codex":0.00020425179,"about_ca_system_score_gemma":0.0001708137,"threshold_uncertainty_score":0.7325398},"labels":[],"label_agreement":null},{"id":"W3043989916","doi":"10.1186/s12870-020-02541-x","title":"A single nucleotide substitution at the 3′-end of SBPase gene involved in Calvin cycle severely affects plant growth and grain yield in rice","year":2020,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Photosynthetic Processes and Mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":16,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Key Research and Development Program of China; Institute of Genetics and Developmental Biology, Chinese Academy of Sciences; Chinese Academy of Sciences; Institute of Genetics; National Natural Science Foundation of China","keywords":"Biology; Mutant; Complementation; Oryza sativa; Gene; Chloroplast; Genetics; Mutation; Biochemistry","score_opus":0.018959622572009047,"score_gpt":0.21240161068809973,"score_spread":0.1934419881160907,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3043989916","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9980045,0.0006741971,0.00031197275,0.00024843527,0.00008507032,0.00022325301,0.00034224958,0.0000071028703,0.00010320422],"genre_scores_gemma":[0.99866486,0.00035976185,0.00011961811,0.00048422808,0.000045248682,0.000018506233,0.00029123417,0.000008980854,0.0000075783823],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9990799,0.000103912214,0.00019484902,0.00033336147,0.00004858799,0.00023940885],"domain_scores_gemma":[0.9996221,0.000078239864,0.00009297024,0.00012748936,0.000011272438,0.000067943234],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00017228744,0.00013954527,0.00020633402,0.000040613864,0.000035201003,0.000005135567,0.0001459797,0.0001721719,0.0000060054776],"category_scores_gemma":[0.00023377038,0.000104971994,0.000035594367,0.00010341934,0.0001312357,0.0000036582715,0.0001596051,0.00009348469,0.0000018165009],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00050099246,0.000057542147,0.00507039,0.00006796725,0.000010118541,0.000016373693,0.00010126529,0.0000078200765,0.99370426,0.00035623944,0.000061019222,0.000045985355],"study_design_scores_gemma":[0.0006509975,0.0003589726,0.0027836536,0.000029023084,0.000010184825,0.00004939961,0.00006155037,0.00029438097,0.9946071,0.0002664427,0.0007466663,0.00014166484],"about_ca_topic_score_codex":0.00035051125,"about_ca_topic_score_gemma":0.0039056886,"teacher_disagreement_score":0.0035551775,"about_ca_system_score_codex":0.00001409424,"about_ca_system_score_gemma":0.00006523003,"threshold_uncertainty_score":0.42806336},"labels":[],"label_agreement":null},{"id":"W3046910449","doi":"10.1186/s12870-020-02566-2","title":"RETRACTED ARTICLE: Contribution of anthocyanin pathways to fruit flesh coloration in pitayas","year":2020,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Botanical Research and Applications","field":"Agricultural and Biological Sciences","cited_by":23,"is_retracted":true,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ministry of Agriculture","funders":"","keywords":"Anthocyanin; Flesh; Biology; Cyanidin; Cultivar; Delphinidin; Transcriptome; Metabolome; Polyphenol; Botany; Biochemistry; MYB; Pigment; Food science; Gene; Transcription factor; Metabolite; Gene expression; Chemistry","score_opus":0.06384946700407562,"score_gpt":0.27231260770436944,"score_spread":0.20846314070029381,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3046910449","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99505836,0.000028709777,0.00017885728,0.0038520799,0.000014910461,0.0003016594,0.00043477345,0.000027357935,0.0001033215],"genre_scores_gemma":[0.99902546,0.000018779536,0.00013038288,0.0003607286,0.00007900941,0.000028258033,0.00035369647,3.601053e-7,0.000003326657],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9991906,0.000110669636,0.00021712542,0.00019573286,0.00007566205,0.0002102088],"domain_scores_gemma":[0.9993745,0.00034540225,0.000051589584,0.00003045026,0.000059653157,0.0001384016],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00020034293,0.00005969815,0.0001443723,0.00000727681,0.000041163035,0.000009372941,0.00013972606,0.00013589105,0.000121483645],"category_scores_gemma":[0.00069936574,0.000025412215,0.000027634027,0.00040972093,0.000038647235,0.000033375003,0.000045853547,0.00012268563,0.000071267175],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014817825,0.0000519284,0.026543755,0.0000017238256,0.0000017680308,0.0000010711359,0.00002228587,0.000002428168,0.9607756,0.008668151,0.0003358643,0.0034472123],"study_design_scores_gemma":[0.00037305523,0.001255269,0.84010965,0.000014240866,0.0000039739707,0.0000026230832,0.00012797644,0.0011931842,0.1439764,0.0023137052,0.01047203,0.00015786324],"about_ca_topic_score_codex":0.00010912982,"about_ca_topic_score_gemma":0.0019482956,"teacher_disagreement_score":0.8167992,"about_ca_system_score_codex":0.000016617938,"about_ca_system_score_gemma":0.0000153249,"threshold_uncertainty_score":0.13301608},"labels":[],"label_agreement":null},{"id":"W3047086031","doi":"10.1186/s12870-020-02565-3","title":"Molecular characterization of an anthocyanin-related glutathione S-transferase gene in Japanese gentian with the CRISPR/Cas9 system","year":2020,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Plant Gene Expression Analysis","field":"Biochemistry, Genetics and Molecular Biology","cited_by":50,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Japan Society for the Promotion of Science; Toyo University; Institute of Genetics; Ministry of Agriculture, Forestry and Fisheries","keywords":"Biology; Anthocyanin; Petal; Gene; Genetics; Phenotype; Mutant; Genome; Botany","score_opus":0.008862955589479967,"score_gpt":0.21628116494348262,"score_spread":0.20741820935400265,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3047086031","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9942936,0.00011450012,0.004488756,0.00022814714,0.0000433149,0.0002491319,0.0005065769,0.000021606453,0.00005441621],"genre_scores_gemma":[0.9950399,0.00005629827,0.00022360854,0.00029490722,0.000048013313,0.000019457855,0.004281817,0.000019966725,0.000016073369],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99848276,0.00040418512,0.00033557686,0.00044392725,0.000101354315,0.00023221955],"domain_scores_gemma":[0.9993663,0.000015385418,0.00015198557,0.0003064508,0.000051608222,0.00010826846],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001849076,0.0001930078,0.000295894,0.00006981158,0.000047191385,0.000010400791,0.00029320762,0.00022362845,0.000013401689],"category_scores_gemma":[0.000024706811,0.00013031466,0.00007173947,0.00023274185,0.00008564312,0.0000057436896,0.000056047866,0.00011064078,0.000006635858],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0004930814,0.000047372425,0.0016902667,0.000036858848,0.000079257945,0.00005210931,0.00023903108,0.00027468533,0.99695355,0.00005372629,0.000029850406,0.000050187427],"study_design_scores_gemma":[0.00085655437,0.00038946004,0.0022243338,0.000022521768,0.00006547698,0.00014377177,0.00031511608,0.0032998393,0.9918558,7.748667e-7,0.000620185,0.00020616173],"about_ca_topic_score_codex":0.00005065397,"about_ca_topic_score_gemma":0.000114926086,"teacher_disagreement_score":0.0050977687,"about_ca_system_score_codex":0.000009088553,"about_ca_system_score_gemma":0.00006936054,"threshold_uncertainty_score":0.5314077},"labels":[],"label_agreement":null},{"id":"W3080270327","doi":"10.1186/s12870-020-02583-1","title":"Comparative transcriptome analysis provides insight into regulation pathways and temporal and spatial expression characteristics of grapevine (Vitis vinifera) dormant buds in different nodes","year":2020,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Horticultural and Viticultural Research","field":"Agricultural and Biological Sciences","cited_by":27,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ministry of Agriculture","funders":"Jiangsu Planned Projects for Postdoctoral Research Funds; Jiangsu Provincial Key Research and Development Program; Government of Jiangsu Province; Natural Science Foundation of Jiangsu Province; National Natural Science Foundation of China","keywords":"Biology; Dormancy; Vitis vinifera; Transcriptome; Annual growth cycle of grapevines; Vineyard; Vine; Botany; Horticulture; Gene; Gene expression; Shoot; Genetics; Germination","score_opus":0.06176551701066396,"score_gpt":0.2655306068156208,"score_spread":0.20376508980495683,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3080270327","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9986706,0.00016788753,0.00003243435,0.0005720932,0.00001809967,0.00023229413,0.00027829868,0.000016682832,0.000011618923],"genre_scores_gemma":[0.9985453,0.0001809261,0.000060173086,0.000041295385,0.00007776402,0.000015394184,0.0010724589,5.595819e-7,0.0000061171972],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9988548,0.00019113865,0.000345658,0.0003048769,0.00011418576,0.00018932771],"domain_scores_gemma":[0.9995114,0.00017932596,0.00010947108,0.000027447259,0.000049791182,0.00012254926],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00008229592,0.00016206912,0.0005023333,0.000031583295,0.00008327927,0.000028496337,0.00009032243,0.00010796088,0.00004382509],"category_scores_gemma":[0.000042373704,0.00005286929,0.000060274568,0.00025586004,0.00014301346,0.000091196496,0.0000707734,0.00010814488,9.066999e-7],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00018408579,0.000035285826,0.26778474,0.00003133221,0.00002005138,0.0000021329156,0.0010620193,4.2606584e-7,0.7260202,0.0000395447,0.0000047914,0.004815345],"study_design_scores_gemma":[0.00021300082,0.00052463193,0.94963413,0.00003080868,0.000032578446,0.0000031640848,0.00029624242,0.0017001627,0.04718649,0.000053261883,0.00019167416,0.00013385611],"about_ca_topic_score_codex":0.00089153805,"about_ca_topic_score_gemma":0.004560394,"teacher_disagreement_score":0.68184936,"about_ca_system_score_codex":0.000010339863,"about_ca_system_score_gemma":0.0000052379155,"threshold_uncertainty_score":0.2544807},"labels":[],"label_agreement":null},{"id":"W3082577216","doi":"10.1186/s12870-020-02623-w","title":"Overexpression of MaTPD1A impairs fruit and pollen development by modulating some regulators in Musa itinerans","year":2020,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Plant Reproductive Biology","field":"Biochemistry, Genetics and Molecular Biology","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ministry of Agriculture","funders":"Guangdong Academy of Agricultural Sciences; Guangzhou Municipal Science and Technology Bureau; National Natural Science Foundation of China","keywords":"Biology; Pollen; Tapetum; Stamen; Ploidy; Gametophyte; Botany; Oryza sativa; Arabidopsis thaliana; Cell biology; Gene; Genetics; Microspore","score_opus":0.01539182833455668,"score_gpt":0.22760481205192654,"score_spread":0.21221298371736985,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3082577216","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99781764,0.0010596736,0.00012586568,0.0001584377,0.00006011274,0.0002025394,0.00049078936,0.00001509609,0.00006982135],"genre_scores_gemma":[0.9964373,0.00010165579,0.0017178655,0.00020779908,0.0001347523,0.0000144008045,0.0013347414,0.000014722121,0.000036759266],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99853474,0.00014277457,0.00037246323,0.0005976785,0.00005419521,0.0002981766],"domain_scores_gemma":[0.99951494,0.000039060793,0.00015604233,0.0001778235,0.000021475716,0.000090687136],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00018206477,0.00019801833,0.00032024714,0.00005480528,0.000037111204,0.0000037125487,0.00015901354,0.00028348662,0.000008742315],"category_scores_gemma":[0.000157444,0.0001685802,0.000038014943,0.000063302454,0.00011324245,0.0000050413237,0.0002071013,0.0001001588,0.0000023109128],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00025567898,0.000028574508,0.09336323,0.000042287877,0.000025415671,0.000002117236,0.00011944557,0.000015099671,0.90462494,0.00011014406,0.0010197946,0.0003932682],"study_design_scores_gemma":[0.0011114124,0.00038653967,0.041367356,0.000049159644,0.000007366319,0.00006748592,0.00012254444,0.00019939223,0.93822074,0.000085911684,0.01802656,0.00035555754],"about_ca_topic_score_codex":0.000049132505,"about_ca_topic_score_gemma":0.000040638377,"teacher_disagreement_score":0.05199588,"about_ca_system_score_codex":0.000013571677,"about_ca_system_score_gemma":0.00007950793,"threshold_uncertainty_score":0.6874501},"labels":[],"label_agreement":null},{"id":"W3083402450","doi":"10.1186/s12870-020-02631-w","title":"Identification of loci controlling mineral element concentration in soybean seeds","year":2020,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Soybean genetics and cultivation","field":"Agricultural and Biological Sciences","cited_by":19,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Agriculture and Agri-Food Canada; Université Laval","funders":"Université Laval","keywords":"Biology; Candidate gene; Genotyping; Quantitative trait locus; Single-nucleotide polymorphism; Biotechnology; Genome-wide association study; Genetics; Gene; Agronomy; Computational biology; Genotype","score_opus":0.03323425617566944,"score_gpt":0.23016732161968534,"score_spread":0.1969330654440159,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3083402450","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9988275,0.000076606084,0.00019179961,0.00055013323,0.000048864138,0.00015950092,0.000089810586,0.000011407995,0.000044337197],"genre_scores_gemma":[0.99898285,0.000017052818,0.000048203616,0.00016683838,0.00015573717,0.0000072276557,0.00061531673,3.2309896e-7,0.0000064503315],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99935263,0.00006150774,0.00027890963,0.00014649174,0.00004951625,0.00011092899],"domain_scores_gemma":[0.99973947,0.000062349034,0.00012243049,0.000018040088,0.000028687053,0.00002902053],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012578332,0.00005670571,0.00011082541,0.0000047761773,0.000023902472,0.000008269376,0.00007779082,0.000057437435,0.00003548329],"category_scores_gemma":[0.000041927036,0.000024795409,0.000027730865,0.000112525966,0.000022384429,0.000021391737,0.000012384837,0.000034151002,0.0000057658967],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000418578,0.000017746248,0.12163048,0.000003000112,0.000002889881,1.7475675e-7,0.00008936733,0.000039947015,0.8759444,0.0007205213,0.000062196166,0.0014474589],"study_design_scores_gemma":[0.0010123114,0.0005350429,0.7384706,0.0000128484435,0.000013963195,0.000001736519,0.00082881685,0.024528474,0.23123911,0.0007558767,0.002367815,0.00023336384],"about_ca_topic_score_codex":0.000060916074,"about_ca_topic_score_gemma":0.0002536087,"teacher_disagreement_score":0.64470524,"about_ca_system_score_codex":0.000008358661,"about_ca_system_score_gemma":0.0000056532926,"threshold_uncertainty_score":0.101112746},"labels":[],"label_agreement":null},{"id":"W3083617824","doi":"10.1186/s12870-020-02632-9","title":"Gender, reproductive output covariation and their role on gene diversity of Pinus koraiensis seed orchard crops","year":2020,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Genetic diversity and population structure","field":"Biochemistry, Genetics and Molecular Biology","cited_by":10,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"Korea Forest Service; U.S. Forest Service; University of British Columbia","keywords":"Biology; Population; Seed orchard; Effective population size; Fertility; Genetic variation; Botany; Genetics; Demography; Gene","score_opus":0.03820385642888918,"score_gpt":0.2199534946470693,"score_spread":0.1817496382181801,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3083617824","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99659693,0.00021647157,0.0018278054,0.00013518624,0.00011622613,0.00015771306,0.00068163336,0.000009777663,0.00025826527],"genre_scores_gemma":[0.9977852,0.00006508664,0.0008258813,0.0004418709,0.00015169386,0.0000014529254,0.0006763937,0.000004626259,0.00004776737],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99922246,0.000097907876,0.00011916044,0.00039199888,0.000048184556,0.00012029856],"domain_scores_gemma":[0.9995787,0.000016087253,0.000106604646,0.00017143886,0.00006508577,0.000062069936],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00008372971,0.00011668077,0.00016610361,0.000028770857,0.0001050032,0.000004549787,0.00011161085,0.0001721578,0.000010847165],"category_scores_gemma":[0.00009089419,0.00009966734,0.000048172704,0.00005247093,0.00007929194,0.0000022394472,0.00027810005,0.000059539103,0.000005278015],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0009970323,0.000028569859,0.22547269,0.000026080561,0.00013494703,0.0000015823847,0.0015158944,0.0003204221,0.7694014,0.0004673732,0.0007068682,0.000927193],"study_design_scores_gemma":[0.0015740681,0.0010940131,0.48413566,0.0000049041114,0.000058968446,0.000038540136,0.0007499617,0.00029783306,0.48975834,0.0008738485,0.021023266,0.00039060457],"about_ca_topic_score_codex":0.000045122062,"about_ca_topic_score_gemma":0.000014858427,"teacher_disagreement_score":0.279643,"about_ca_system_score_codex":0.000004616659,"about_ca_system_score_gemma":0.000027748116,"threshold_uncertainty_score":0.40643162},"labels":[],"label_agreement":null},{"id":"W3085196816","doi":"10.1186/s12870-020-02609-8","title":"Establishment of a PEG-mediated protoplast transformation system based on DNA and CRISPR/Cas9 ribonucleoprotein complexes for banana","year":2020,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"CRISPR and Genetic Engineering","field":"Biochemistry, Genetics and Molecular Biology","cited_by":111,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ministry of Agriculture; Institute of Genetics","funders":"National Natural Science Foundation of China","keywords":"CRISPR; Biology; Cas9; Protoplast; Genome editing; Transformation (genetics); Plasmid; Ribonucleoprotein; Guide RNA; DNA; Mutagenesis; Computational biology; Gene; Genetics; Molecular biology; RNA; Mutation","score_opus":0.015350881008067462,"score_gpt":0.2713733266525655,"score_spread":0.25602244564449805,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3085196816","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.7341444,0.00024169419,0.2614195,0.00032111717,0.00009853816,0.0019285737,0.0016472702,0.000039139457,0.00015977056],"genre_scores_gemma":[0.9969055,0.000011742576,0.0016335984,0.00011793872,0.00007703012,0.00015451993,0.0010850006,0.000011674118,0.0000030058134],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9992791,0.00003706451,0.00022961273,0.00023384692,0.000049702616,0.00017068537],"domain_scores_gemma":[0.99967587,0.000041879146,0.00006520079,0.00010841601,0.000035033794,0.0000736119],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001078681,0.00013195496,0.00019617617,0.000040184146,0.000034429708,0.000007567425,0.000080456695,0.00012319771,0.000003222453],"category_scores_gemma":[0.00006368406,0.00011448607,0.00005147733,0.000046523164,0.000044951863,0.0000020358,0.00001772688,0.000041145115,0.0000011358726],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00065880653,0.0000306401,0.0011213961,0.00077213004,0.000025649711,6.886685e-7,0.000101362464,0.00069663115,0.9954099,0.00041583262,0.0003080831,0.0004588972],"study_design_scores_gemma":[0.002060116,0.0019530432,0.0011816671,0.000068625726,0.000028286364,0.000010852328,0.00022269614,0.05833271,0.9209997,0.000005702081,0.0149009,0.00023569899],"about_ca_topic_score_codex":0.00001366596,"about_ca_topic_score_gemma":0.00003328259,"teacher_disagreement_score":0.2627611,"about_ca_system_score_codex":0.0000068108407,"about_ca_system_score_gemma":0.000034899374,"threshold_uncertainty_score":0.46686065},"labels":[],"label_agreement":null},{"id":"W3089288508","doi":"10.1186/s12870-020-02644-5","title":"Identification, characterization and functional analysis of AGAMOUS subfamily genes associated with floral organs and seed development in Marigold (Tagetes erecta)","year":2020,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Plant Molecular Biology Research","field":"Agricultural and Biological Sciences","cited_by":28,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"Fundamental Research Funds for the Central Universities; National Natural Science Foundation of China","keywords":"Biology; Agamous; Subfamily; Botany; Inflorescence; Gynoecium; Petal; Gene; Stamen; Arabidopsis thaliana; Ectopic expression; Asteraceae; Arabidopsis; Gene family; Genetics; Gene expression; Pollen","score_opus":0.029466978106567194,"score_gpt":0.2055068980729655,"score_spread":0.17603991996639828,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3089288508","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9989744,0.00008448224,0.00012558665,0.00022356007,0.000013696199,0.0001248427,0.000432478,0.000016701915,0.0000042669058],"genre_scores_gemma":[0.99325126,0.000057359634,0.000040763687,0.00009393834,0.00001445188,0.000010455818,0.006507323,6.870177e-7,0.000023741484],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99910885,0.00016678654,0.00020870089,0.00028458078,0.000072695286,0.0001583558],"domain_scores_gemma":[0.9995677,0.00019502926,0.00010482457,0.000022352724,0.0000559145,0.000054174954],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00020275706,0.00009339701,0.00023238217,0.000055444078,0.000058910602,0.000014800422,0.000072689865,0.00011901005,0.000023394943],"category_scores_gemma":[0.00010132253,0.000040876126,0.000017453924,0.0005646622,0.00009140638,0.00003155451,0.000053649073,0.00006405732,0.0000015530172],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006047145,0.000012873007,0.49104074,0.0000024486437,0.00006768957,0.0000014845741,0.000031041065,0.0000013088487,0.50825,0.00001542451,0.0000015673183,0.0005149548],"study_design_scores_gemma":[0.00014663444,0.000105629646,0.984037,0.000004415807,0.000039588987,0.0000041941225,0.000037579113,0.0005951032,0.014824806,0.0000042239894,0.0001108851,0.000089954665],"about_ca_topic_score_codex":0.00004547108,"about_ca_topic_score_gemma":0.002735107,"teacher_disagreement_score":0.4934252,"about_ca_system_score_codex":0.000010810995,"about_ca_system_score_gemma":0.000021035468,"threshold_uncertainty_score":0.166688},"labels":[],"label_agreement":null},{"id":"W3094075019","doi":"10.1186/s12870-020-02681-0","title":"Genomic regions associated with important seed quality traits in food-grade soybeans","year":2020,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Soybean genetics and cultivation","field":"Agricultural and Biological Sciences","cited_by":20,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"Ontario Ministry of Agriculture, Food and Rural Affairs; Ontario Agri-Food Innovation Alliance; University of Guelph","keywords":"Biology; Quantitative trait locus; Trait; Biotechnology; Cultivar; Inbred strain; Marker-assisted selection; Agronomy; Food science; Genetics; Gene","score_opus":0.07740785841487982,"score_gpt":0.24210321941501065,"score_spread":0.16469536100013082,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3094075019","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99764353,0.00009966433,0.000013208086,0.0014511677,0.000025622832,0.00018557142,0.00043672905,0.000050561317,0.000093942945],"genre_scores_gemma":[0.99842936,0.000024673112,0.000057710196,0.0005810509,0.00008675858,0.000012097129,0.0007921744,0.0000010077027,0.000015175162],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99892104,0.0001945906,0.0002744341,0.00029492815,0.00006429458,0.0002507451],"domain_scores_gemma":[0.99949163,0.00023505477,0.00014032992,0.000027734093,0.000019894367,0.00008535781],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00019470477,0.00011929729,0.00020335709,0.000008214186,0.00007937418,0.00001313649,0.00015115176,0.00013246603,0.000031334195],"category_scores_gemma":[0.000120014745,0.000045193352,0.000046493093,0.00024009914,0.00004793118,0.000018304869,0.00002696102,0.00012280476,0.0000062913286],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006231917,0.00006071686,0.5090275,0.0000023460725,0.000016967324,0.0000024710785,0.00020498724,0.000006307667,0.48874748,0.0014428982,0.00008364764,0.00034239658],"study_design_scores_gemma":[0.00031245855,0.0005428371,0.9956667,0.000007708347,0.0000050212793,0.000003213675,0.00033969615,0.00011350435,0.0011857959,0.0004714165,0.0011933446,0.00015832811],"about_ca_topic_score_codex":0.00012978369,"about_ca_topic_score_gemma":0.010730065,"teacher_disagreement_score":0.48756167,"about_ca_system_score_codex":0.000019649162,"about_ca_system_score_gemma":0.000017902465,"threshold_uncertainty_score":0.5987628},"labels":[],"label_agreement":null},{"id":"W3097248357","doi":"10.1186/s12870-020-02724-6","title":"Loss function of SL (sekiguchi lesion) in the rice cultivar Minghui 86 leads to enhanced resistance to (hemi)biotrophic pathogens","year":2020,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Plant-Microbe Interactions and Immunity","field":"Agricultural and Biological Sciences","cited_by":36,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Institute of Genetics and Developmental Biology, Chinese Academy of Sciences; Fujian Academy of Agricultural Sciences; Minjiang University; Chinese Academy of Sciences; Natural Science Foundation of Fujian Province; China Postdoctoral Science Foundation; Fujian Agriculture and Forestry University; Institute of Genetics; National Natural Science Foundation of China","keywords":"Biology; Jasmonic acid; Xanthomonas oryzae; Tryptamine; Mutant; Oryza sativa; Xanthomonas oryzae pv. oryzae; Microbiology; Magnaporthe; Salicylic acid; Magnaporthe grisea; Biochemistry; Botany; Pathogen; Gene","score_opus":0.04004171805988654,"score_gpt":0.2447182860217224,"score_spread":0.20467656796183586,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3097248357","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9955236,0.00008690454,0.00013345528,0.0029644098,0.00014078747,0.00024108273,0.0005468783,0.000022691227,0.00034019235],"genre_scores_gemma":[0.9972853,0.00004247523,0.00022541548,0.001980006,0.00013159098,0.000020405785,0.00021866687,9.141412e-7,0.00009524105],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9988417,0.00024043812,0.00028477176,0.00029833586,0.000078385754,0.00025637602],"domain_scores_gemma":[0.9992874,0.00041026468,0.000097083015,0.000082946506,0.000047780537,0.000074507225],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00020480555,0.00013730768,0.00022238307,0.000022664957,0.00012173788,0.000015908148,0.00036966882,0.00011036597,0.000074483876],"category_scores_gemma":[0.00020937606,0.00005120699,0.0000673074,0.00045926945,0.000039597842,0.000046421937,0.00008123134,0.0001774396,0.00011646265],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005290268,0.000059603648,0.0033895564,0.000009767798,0.0000046746222,0.000003476513,0.0002601059,0.000008222463,0.9929099,0.000097216696,0.0017602505,0.0009681673],"study_design_scores_gemma":[0.0003761549,0.0016519063,0.49827874,0.00013267586,0.000024823143,0.000035378995,0.0014652818,0.00001577034,0.34208974,0.00014206143,0.15530366,0.00048379673],"about_ca_topic_score_codex":0.00023775666,"about_ca_topic_score_gemma":0.002899206,"teacher_disagreement_score":0.6508202,"about_ca_system_score_codex":0.00002064169,"about_ca_system_score_gemma":0.000010180651,"threshold_uncertainty_score":0.20881604},"labels":[],"label_agreement":null},{"id":"W3097428711","doi":"10.1186/s12870-020-02712-w","title":"Genome-wide identification of MADS-box gene family in sacred lotus (Nelumbo nucifera) identifies a SEPALLATA homolog gene involved in floral development","year":2020,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Plant Molecular Biology Research","field":"Agricultural and Biological Sciences","cited_by":38,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Institute of Genetics","keywords":"MADS-box; Lotus; Biology; Organogenesis; Gene family; Gene; Lotus japonicus; Ornamental plant; Genome; Arabidopsis; Genetics; Botany","score_opus":0.056405344780480926,"score_gpt":0.2528862821637494,"score_spread":0.1964809373832685,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3097428711","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99721426,0.0010924753,0.00008010002,0.00040131615,0.00010647539,0.00049939996,0.0005380081,0.000043462136,0.000024507504],"genre_scores_gemma":[0.99476296,0.00036499306,0.0005087094,0.00029201675,0.00007129958,0.00006113617,0.003905553,0.0000027411206,0.000030605614],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9971464,0.00050063577,0.0008434724,0.00072661234,0.00017652434,0.00060630485],"domain_scores_gemma":[0.9991552,0.000304764,0.00021456784,0.00012300386,0.000070036935,0.00013242217],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00071793323,0.000244565,0.00052038766,0.0001033853,0.000075846256,0.000028021559,0.0007159908,0.00036268198,0.000042431842],"category_scores_gemma":[0.0002822533,0.00013005914,0.00008015774,0.0005948929,0.00018559903,0.00006702521,0.00034608136,0.00026015093,0.0000837263],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00020946343,0.0000580738,0.315607,0.00001545709,0.00001822722,0.0000470217,0.00012023491,0.000015446836,0.683506,0.0000117454665,0.000045029923,0.00034628023],"study_design_scores_gemma":[0.00042714961,0.0001574752,0.7935568,0.000012773177,0.000005091213,0.000015662607,0.00015581389,0.00014486357,0.20434436,0.000119952514,0.00082700327,0.00023302826],"about_ca_topic_score_codex":0.00048593036,"about_ca_topic_score_gemma":0.007810528,"teacher_disagreement_score":0.47916165,"about_ca_system_score_codex":0.00007030438,"about_ca_system_score_gemma":0.00009418315,"threshold_uncertainty_score":0.5303658},"labels":[],"label_agreement":null},{"id":"W3100941594","doi":"10.1186/s12870-020-02723-7","title":"Demographic history and genetic differentiation of an endemic and endangered Ulmus lamellosa (Ulmus)","year":2020,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Genetic diversity and population structure","field":"Biochemistry, Genetics and Molecular Biology","cited_by":26,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Saint Mary's University","funders":"National Natural Science Foundation of China","keywords":"Phylogeography; Endangered species; Biology; Genetic divergence; Range (aeronautics); Ecology; Genetic diversity; Genetic structure; Haplotype; Glacial period; Evolutionary biology; Phylogenetics; Genetic variation; Paleontology; Population; Gene; Genotype; Demography; Genetics","score_opus":0.01983833145461581,"score_gpt":0.20454951395626234,"score_spread":0.18471118250164653,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3100941594","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.996486,0.0022392578,0.00084528077,0.00004160072,0.000094103954,0.0000894921,0.00015455183,0.000008366268,0.000041335355],"genre_scores_gemma":[0.9973664,0.0004703113,0.001262478,0.00023273665,0.00008204408,0.0000017588163,0.00056048576,0.000005654734,0.0000180894],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9993483,0.00009255876,0.00013595737,0.00027305583,0.000038781916,0.00011137511],"domain_scores_gemma":[0.9996785,0.000012460468,0.00008905514,0.00010654653,0.00002126114,0.000092202026],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00003282668,0.000104272265,0.00014289672,0.00004060274,0.000030022167,0.000003541092,0.000079890575,0.00019452606,0.000024591282],"category_scores_gemma":[0.000025624566,0.0000993903,0.000029744137,0.0000285589,0.000120417775,0.0000024546514,0.0000692163,0.000053248463,7.2620963e-7],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012459847,0.00001090698,0.2560478,0.000042394167,0.000030723564,0.0000014918652,0.0002161993,0.000008949607,0.7412972,0.00012925298,0.00020476678,0.0018857736],"study_design_scores_gemma":[0.0012230251,0.00079151697,0.9308377,0.0000073614265,0.00009179144,0.00009647218,0.00012913243,0.00060397224,0.043948993,0.0002812484,0.021669736,0.00031904178],"about_ca_topic_score_codex":0.000028481434,"about_ca_topic_score_gemma":0.00009356277,"teacher_disagreement_score":0.6973482,"about_ca_system_score_codex":0.0000036820948,"about_ca_system_score_gemma":0.00002445984,"threshold_uncertainty_score":0.40530187},"labels":[],"label_agreement":null},{"id":"W3108758045","doi":"10.1186/s12870-020-02722-8","title":"Population structure of Nepali spring wheat (Triticum aestivum L.) germplasm","year":2020,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Wheat and Barley Genetics and Pathology","field":"Agricultural and Biological Sciences","cited_by":15,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval; University of Guelph","funders":"Global Affairs Canada; Agricultural Adaptation Council; Agriculture and Agri-Food Canada; International Development Research Centre; NODAI Genome Research Center, Tokyo University of Agriculture; Grain Farmers of Ontario","keywords":"Germplasm; Biology; Genetic diversity; Nepali; Population; Agronomy; UPGMA; Genetic erosion; Biotechnology; Demography","score_opus":0.031565009557250945,"score_gpt":0.2217356190505035,"score_spread":0.19017060949325257,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3108758045","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99849135,0.0001775087,0.000027925682,0.00045755637,0.00017202558,0.000091877766,0.0004401903,0.00002798459,0.000113565264],"genre_scores_gemma":[0.99873656,0.000027284621,0.0003292584,0.000265147,0.0003361542,0.0000012155714,0.00029503083,7.060803e-7,0.000008671517],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9992608,0.00007443782,0.0001958013,0.00022324415,0.000048192327,0.0001975268],"domain_scores_gemma":[0.99970424,0.000099253004,0.000067337234,0.00003220861,0.000022502561,0.00007445402],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00004093148,0.00010503525,0.00021615585,0.000008813901,0.000059404436,0.0000058024907,0.00013440204,0.00016404083,0.00016328601],"category_scores_gemma":[0.000031673117,0.000041292267,0.000056436445,0.000108661574,0.00004253063,0.000019031306,0.000050226525,0.00007954103,0.000008188389],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000036028403,0.000008184006,0.23345318,0.000008846688,0.0000032951432,0.000002000756,0.000015722002,0.000008463163,0.7638057,0.001040439,0.000065492975,0.0015526364],"study_design_scores_gemma":[0.0002414668,0.0007206579,0.9369597,0.00001350515,0.000019281772,0.000039029044,0.000040648316,0.0002701291,0.052453164,0.001144664,0.007857746,0.00024000995],"about_ca_topic_score_codex":0.0003039267,"about_ca_topic_score_gemma":0.0010985135,"teacher_disagreement_score":0.7113525,"about_ca_system_score_codex":0.000003558801,"about_ca_system_score_gemma":0.0000045479655,"threshold_uncertainty_score":0.17878672},"labels":[],"label_agreement":null},{"id":"W3110743609","doi":"10.1186/s12870-021-02948-0","title":"Parallel analysis of global garlic gene expression and alliin content following leaf wounding","year":2021,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Garlic and Onion Studies","field":"Agricultural and Biological Sciences","cited_by":14,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Institute of Genetics and Developmental Biology, Chinese Academy of Sciences; Biotechnology and Biological Sciences Research Council; Shanghai Jiao Tong University; Jiangsu Normal University; Government of Jiangsu Province; Chinese Academy of Sciences; Institute of Genetics; National Natural Science Foundation of China","keywords":"Alliin; Allicin; Allium sativum; Biosynthesis; Serine; Biology; Biochemistry; Cysteine; Transcriptome; Gene expression; Gene; Botany; Enzyme","score_opus":0.08053168572491393,"score_gpt":0.26738085880903834,"score_spread":0.1868491730841244,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3110743609","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9970889,0.0021478925,0.00012526115,0.0001641777,0.00010035026,0.000044118897,0.00015850937,0.000016112477,0.00015468881],"genre_scores_gemma":[0.9985055,0.00030038523,0.00071720383,0.00011275592,0.000039604412,0.00000483482,0.00022500762,2.4369436e-7,0.00009447225],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.999214,0.000099173645,0.00019016028,0.00025061503,0.00006480082,0.0001812498],"domain_scores_gemma":[0.9996248,0.00018319332,0.00007621476,0.00003809797,0.00002892586,0.0000487682],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012460216,0.000091761045,0.0003322253,0.000008693159,0.00010518495,0.000011574474,0.000075183554,0.000085081265,0.00005003845],"category_scores_gemma":[0.000055806093,0.00003383637,0.00014588471,0.0002578586,0.00004677151,0.000022095064,0.00011605173,0.00003538907,0.0000022133484],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000018709366,0.000018669558,0.59687066,0.0000017816064,0.0001328271,0.000005081412,0.00001918968,0.0000021094515,0.40177956,0.0003885797,0.000054573222,0.0007082769],"study_design_scores_gemma":[0.00019683712,0.00006946136,0.9916439,0.000013648236,0.00016639086,0.000011711788,0.00071072095,0.00003893971,0.0050299144,0.00014147059,0.0018627709,0.00011424273],"about_ca_topic_score_codex":0.00022266025,"about_ca_topic_score_gemma":0.0020264674,"teacher_disagreement_score":0.39674965,"about_ca_system_score_codex":0.000011783417,"about_ca_system_score_gemma":0.0000065188146,"threshold_uncertainty_score":0.13798071},"labels":[],"label_agreement":null},{"id":"W3111519154","doi":"10.1186/s12870-021-02889-8","title":"Gene co-expression analysis of tomato seed maturation reveals tissue-specific regulatory networks and hubs associated with the acquisition of desiccation tolerance and seed vigour","year":2021,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Seed Germination and Physiology","field":"Agricultural and Biological Sciences","cited_by":48,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Conseil Régional des Pays de la Loire; Institut Agro Rennes-Angers","keywords":"Biology; Endosperm; Transcriptome; Gene; Desiccation tolerance; Desiccation; Embryo; Gene regulatory network; Gene expression; Genetics; Dormancy; Seed dormancy; Cell biology; Botany; Germination","score_opus":0.017174070078309896,"score_gpt":0.2280420442852648,"score_spread":0.2108679742069549,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3111519154","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99877816,0.0006082905,0.00011603678,0.00020918674,0.000026595446,0.000107590036,0.00012260152,0.00001201128,0.000019516952],"genre_scores_gemma":[0.99792653,0.00010970587,0.00007966399,0.00009707626,0.00004457507,0.000006409707,0.0016962069,6.577366e-7,0.00003914778],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.999127,0.0003151189,0.00019653047,0.00020020502,0.000060928007,0.000100221936],"domain_scores_gemma":[0.9991502,0.0003952055,0.0002593292,0.00005647603,0.00011357752,0.00002519983],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00020756508,0.000082520186,0.00025615128,0.000021900252,0.00008847043,0.000009734732,0.000055781366,0.0001391255,0.000029683684],"category_scores_gemma":[0.000019485968,0.000031872278,0.000028566936,0.00035958918,0.00010060882,0.000038493614,0.000020894046,0.000046473946,2.747467e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014341828,0.000024048046,0.031167047,0.0000047169515,0.000043178978,4.4618707e-7,0.000064480155,0.00020092801,0.96771973,0.00012736507,0.00008260394,0.00042200688],"study_design_scores_gemma":[0.0001273856,0.0000966803,0.9116289,0.000020097432,0.00005284144,0.000005542447,0.000093224335,0.0015913016,0.08620234,0.000048870377,0.000069514674,0.000063300824],"about_ca_topic_score_codex":0.000011354279,"about_ca_topic_score_gemma":0.000106262596,"teacher_disagreement_score":0.8815174,"about_ca_system_score_codex":0.0000074119057,"about_ca_system_score_gemma":0.000006357254,"threshold_uncertainty_score":0.12997137},"labels":[],"label_agreement":null},{"id":"W3111988997","doi":"10.1186/s12870-021-02836-7","title":"Environmental and genetic regulation of plant height in soybean","year":2021,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Soybean genetics and cultivation","field":"Agricultural and Biological Sciences","cited_by":74,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Zhejiang Academy of Agricultural Sciences; Institute of Genetics and Developmental Biology, Chinese Academy of Sciences; Natural Science Foundation of Hebei Province; Fujian Agriculture and Forestry University; Chinese Academy of Sciences; Institute of Genetics; National Natural Science Foundation of China","keywords":"Biology; Shoot; Quantitative trait locus; Population; Trait; Genetic architecture; Crop; Locus (genetics); Agronomy; Main stem; Horticulture; Genetics; Gene","score_opus":0.01791373762801113,"score_gpt":0.18702860987497702,"score_spread":0.1691148722469659,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3111988997","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9991714,0.0003808161,0.000003736795,0.00006177548,0.000034058394,0.00005307709,0.00022612169,0.000003968298,0.000065062086],"genre_scores_gemma":[0.9988989,0.00012529202,0.00020589429,0.000031998738,0.000040183055,0.0000026133346,0.0006680814,2.968059e-7,0.000026688267],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99954957,0.00005360109,0.00012813135,0.00014593305,0.000033668628,0.00008908279],"domain_scores_gemma":[0.9998419,0.00006805591,0.000042586045,0.000023352975,0.000003844862,0.000020254836],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00003797259,0.000050383183,0.00008555658,0.000006650577,0.000022982864,0.000003927185,0.000035557106,0.000065100394,0.00013564847],"category_scores_gemma":[0.000007705211,0.000021537864,0.000015681042,0.000041108455,0.000033371933,0.000009935273,0.000028960145,0.000025597501,0.0000033024187],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000010045766,0.00002137412,0.2718458,0.0000016937422,0.0000016333212,0.0000015159778,0.000020662845,0.0000013726117,0.72369057,0.00019365174,0.000019131134,0.004192552],"study_design_scores_gemma":[0.00010561683,0.00006480026,0.96088755,0.0000052775754,0.000002183688,0.000025880436,0.00009792111,0.00012618139,0.0367841,0.00059113215,0.0012551479,0.000054235134],"about_ca_topic_score_codex":0.000029592464,"about_ca_topic_score_gemma":0.0005888672,"teacher_disagreement_score":0.68904173,"about_ca_system_score_codex":0.0000055920223,"about_ca_system_score_gemma":0.0000035197547,"threshold_uncertainty_score":0.14852557},"labels":[],"label_agreement":null},{"id":"W3119093864","doi":"10.1186/s12870-021-03127-x","title":"Exploiting natural variation in crown root traits via genome-wide association studies in maize","year":2021,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Plant nutrient uptake and metabolism","field":"Agricultural and Biological Sciences","cited_by":21,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ministry of Agriculture","funders":"","keywords":"Biology; Quantitative trait locus; Candidate gene; Single-nucleotide polymorphism; Locus (genetics); Genome-wide association study; Genetics; Gene; Genetic architecture; Plant genetics; Association mapping; Genome; Botany; Genotype","score_opus":0.04539767951916199,"score_gpt":0.24836023399380472,"score_spread":0.20296255447464273,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3119093864","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9952102,0.003349713,0.000006597683,0.0005867524,0.000438489,0.00012410477,0.00012997161,0.000030015128,0.00012417143],"genre_scores_gemma":[0.99739385,0.0008686901,0.00011841741,0.0004299887,0.00025160168,0.000022654252,0.0006194574,7.52384e-7,0.00029461866],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9985959,0.00028970346,0.0003275967,0.00032409208,0.00009343071,0.00036928538],"domain_scores_gemma":[0.9982479,0.0014938313,0.00014265392,0.000026963815,0.000055764584,0.000032854325],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005093628,0.00012651097,0.00030379486,0.000035389316,0.000068813184,0.00001784336,0.000108880165,0.00016835208,0.00003512275],"category_scores_gemma":[0.0010441152,0.000057769696,0.000052934094,0.00035432095,0.000016866275,0.00010228544,0.000055928584,0.00017255124,0.00001885351],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000061591214,0.00008119184,0.43032205,0.0000072917865,0.000020574424,0.000037108723,0.0003643618,0.0000076457745,0.5646862,0.00040532433,0.00016559627,0.0038410877],"study_design_scores_gemma":[0.0003522773,0.00002907169,0.97996014,0.000022872531,0.0000072722146,0.000014537641,0.0003001633,0.00003420044,0.0019221022,0.0009320347,0.016277695,0.00014764961],"about_ca_topic_score_codex":0.00011717331,"about_ca_topic_score_gemma":0.01340151,"teacher_disagreement_score":0.56276405,"about_ca_system_score_codex":0.000097126474,"about_ca_system_score_gemma":0.000017376393,"threshold_uncertainty_score":0.7478357},"labels":[],"label_agreement":null},{"id":"W3120797145","doi":"10.1186/s12870-020-02790-w","title":"Targeted amplicon sequencing + next-generation sequencing–based bulked segregant analysis identified genetic loci associated with preharvest sprouting tolerance in common buckwheat (Fagopyrum esculentum)","year":2021,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Seed and Plant Biochemistry","field":"Agricultural and Biological Sciences","cited_by":18,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Institute of Genetics; Japan Society for the Promotion of Science","keywords":"Biology; Bulked segregant analysis; Quantitative trait locus; Genetics; Fagopyrum; Marker-assisted selection; Population; Amplicon; Locus (genetics); Multiplex; Outcrossing; Gene mapping; Botany; Gene; Polymerase chain reaction; Chromosome","score_opus":0.0670240790678523,"score_gpt":0.2277447273267926,"score_spread":0.1607206482589403,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3120797145","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.998146,0.0004816161,0.000096574375,0.00011838535,0.00010714993,0.00022996939,0.00065932877,0.000094996474,0.00006597371],"genre_scores_gemma":[0.98486936,0.00003111712,0.0002488722,0.0002828989,0.00017547394,0.000027494883,0.014264871,0.0000031350935,0.00009678653],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9974583,0.00041655154,0.0005490026,0.0007847357,0.0001944465,0.0005969728],"domain_scores_gemma":[0.9989303,0.00039012954,0.00028951996,0.0001524899,0.000117344,0.000120261204],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00039201282,0.00031777855,0.0005912738,0.000056847523,0.00023183141,0.00014248276,0.00025565404,0.00036549586,0.0001477877],"category_scores_gemma":[0.00013635673,0.00015674758,0.000153842,0.0011562586,0.00008048457,0.0000919038,0.000053793625,0.00027227317,0.000006762054],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000048321155,0.000042966487,0.24561109,0.00001383747,0.00007623342,0.00007677577,0.00004615562,0.0015197911,0.75216734,0.000010048277,0.000019682986,0.00036774288],"study_design_scores_gemma":[0.0007524353,0.00019628821,0.38972062,0.00016311149,0.00023962784,0.00008703415,0.0005012125,0.05905953,0.5484117,0.000046345773,0.000104466126,0.0007175827],"about_ca_topic_score_codex":0.0023984641,"about_ca_topic_score_gemma":0.06511285,"teacher_disagreement_score":0.2037556,"about_ca_system_score_codex":0.00022379402,"about_ca_system_score_gemma":0.00014429813,"threshold_uncertainty_score":0.9519464},"labels":[],"label_agreement":null},{"id":"W3121100476","doi":"10.1186/s12870-020-02799-1","title":"Genome-wide association study of yield and related traits in common wheat under salt-stress conditions","year":2021,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Wheat and Barley Genetics and Pathology","field":"Agricultural and Biological Sciences","cited_by":59,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Genetics","funders":"Chinese Academy of Agricultural Sciences; Chinese Academy of Sciences","keywords":"Biology; Genome-wide association study; Salinity; Haplotype; Common wheat; Quantitative trait locus; Plant genetics; Genetics; Single-nucleotide polymorphism; Agronomy; Chromosome; Population; Genome; Allele; Genotype; Gene; Ecology","score_opus":0.03191972755456283,"score_gpt":0.2392398594524241,"score_spread":0.20732013189786128,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3121100476","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9983205,0.00033047746,4.9195165e-7,0.00045165332,0.000083135186,0.00012028153,0.00035098527,0.000009410598,0.00033302628],"genre_scores_gemma":[0.99903935,0.00013275637,0.0000058959267,0.00010032141,0.000027264296,0.00000686197,0.0005409865,4.771656e-7,0.00014606296],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9992438,0.00015335408,0.00022098862,0.0001853098,0.000040941628,0.00015558986],"domain_scores_gemma":[0.9991698,0.00067116314,0.00007182398,0.00002732095,0.000028714177,0.00003113534],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014132027,0.00007228093,0.00020950453,0.00001536354,0.000057606827,0.000007877748,0.000059958104,0.00016778498,0.00012872767],"category_scores_gemma":[0.000047120462,0.000032979922,0.000025090469,0.00013246719,0.000026330263,0.000013871427,0.00003934546,0.000091945476,0.000002927597],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000010511494,0.00016729572,0.66274047,0.0000025912268,0.0000104892215,0.000007941759,0.00010731345,0.000007803679,0.33664253,0.00010663604,0.000027576589,0.00016882116],"study_design_scores_gemma":[0.0002452053,0.00036638803,0.99442136,0.000008375849,0.000012402983,0.00001046344,0.00073793874,0.000004131754,0.0027332662,0.0012518053,0.00013446697,0.00007421716],"about_ca_topic_score_codex":0.0001964286,"about_ca_topic_score_gemma":0.0260621,"teacher_disagreement_score":0.33390927,"about_ca_system_score_codex":0.000010828516,"about_ca_system_score_gemma":0.000008585574,"threshold_uncertainty_score":0.9917097},"labels":[],"label_agreement":null},{"id":"W3123981644","doi":"10.1186/s12870-021-02828-7","title":"Elucidation of molecular and hormonal background of early growth cessation and endodormancy induction in two contrasting Populus hybrid cultivars","year":2021,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Plant Molecular Biology Research","field":"Agricultural and Biological Sciences","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"European Social Fund; Nemzeti Kutatási Fejlesztési és Innovációs Hivatal; European Commission","keywords":"Cultivar; Biology; Perennial plant; Dormancy; Endogeny; Abscisic acid; Botany; Horticulture; Gene; Gene expression; Plant growth; Biochemistry","score_opus":0.035908993119095824,"score_gpt":0.26943286199762984,"score_spread":0.23352386887853402,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3123981644","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9988522,0.0005986739,0.00005140377,0.00008153223,0.000026727435,0.00011082452,0.00020737831,0.0000062721583,0.000064969994],"genre_scores_gemma":[0.99893165,0.0001129939,0.00023046465,0.000016020864,0.000019304203,0.0000053718036,0.0006798492,6.4249207e-7,0.000003700238],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9990227,0.00027079528,0.00022879918,0.00023847219,0.00007166553,0.00016753357],"domain_scores_gemma":[0.99953467,0.00021370528,0.00011620838,0.000028011862,0.00007255949,0.00003482112],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002616111,0.000083734645,0.00021370628,0.000036350957,0.000033984263,0.000008456869,0.00006185038,0.00007876314,0.000009579754],"category_scores_gemma":[0.00009236582,0.000042352567,0.000027025635,0.00015105106,0.00011476574,0.00006226313,0.00006927643,0.00009931826,5.208003e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000043640917,0.000023675046,0.2618219,0.000009770472,0.00002392782,0.000007960756,0.0000116453,4.2813448e-7,0.7359658,0.0008306032,0.0000015888578,0.0012590591],"study_design_scores_gemma":[0.00034297013,0.00020318289,0.7008571,0.00001544547,0.00002364125,0.00015816478,0.00009433659,0.00007247886,0.29747617,0.00066283555,0.000010593374,0.00008304183],"about_ca_topic_score_codex":0.0006882836,"about_ca_topic_score_gemma":0.0005388812,"teacher_disagreement_score":0.43903524,"about_ca_system_score_codex":0.000007982455,"about_ca_system_score_gemma":0.00001626922,"threshold_uncertainty_score":0.17270875},"labels":[],"label_agreement":null},{"id":"W3130470372","doi":"10.1186/s12870-021-02882-1","title":"Ascorbic acid modulation by ABI4 transcriptional repression of VTC2 in the salt tolerance of Arabidopsis","year":2021,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Plant Stress Responses and Tolerance","field":"Agricultural and Biological Sciences","cited_by":65,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Biotechnology Research Institute","funders":"Agricultural Science and Technology Innovation Program; Chinese Academy of Agricultural Sciences; National Natural Science Foundation of China; University of Leeds","keywords":"Arabidopsis; Ascorbic acid; Reactive oxygen species; Abscisic acid; Biology; Psychological repression; Gene; Cell biology; Mutant; Biochemistry; Gene expression; Horticulture","score_opus":0.026246742746404043,"score_gpt":0.2334501711815652,"score_spread":0.20720342843516115,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3130470372","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9967409,0.0014078583,0.000051536652,0.00031161876,0.000073280586,0.000080983475,0.0011796736,0.0000062399004,0.0001479402],"genre_scores_gemma":[0.9987082,0.00031514958,0.00009808267,0.00008179255,0.00003983596,0.000009105465,0.00071041915,3.691949e-7,0.000037047437],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9990288,0.00024787235,0.00028199956,0.00020350498,0.00010137994,0.00013642554],"domain_scores_gemma":[0.99943864,0.00032864115,0.000121728444,0.000059964623,0.000033476106,0.000017574694],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00016540656,0.00007888968,0.00019390244,0.0000099169465,0.00003778564,0.000004730675,0.00016577121,0.00009803882,0.00009229182],"category_scores_gemma":[0.000046246823,0.0000279777,0.000066547145,0.00018027068,0.000057095604,0.00003693576,0.00001541452,0.000074462536,0.0000016832969],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00021020841,0.00008244942,0.046451185,0.000011040092,0.0000035631408,0.0000027603082,0.00004566786,0.00006527326,0.94722944,0.00053400215,0.00015520923,0.0052091912],"study_design_scores_gemma":[0.0002532794,0.00011786712,0.8766421,0.00007067052,0.000005156419,0.00004127843,0.00007377516,0.000836913,0.116346814,0.00056093157,0.0049514286,0.00009978574],"about_ca_topic_score_codex":0.00019263398,"about_ca_topic_score_gemma":0.00089111854,"teacher_disagreement_score":0.8308826,"about_ca_system_score_codex":0.0000045457195,"about_ca_system_score_gemma":0.000011711397,"threshold_uncertainty_score":0.11408975},"labels":[],"label_agreement":null},{"id":"W3131395849","doi":"10.1186/s12870-021-02868-z","title":"MaMAPK3-MaICE1-MaPOD P7 pathway, a positive regulator of cold tolerance in banana","year":2021,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Plant Gene Expression Analysis","field":"Biochemistry, Genetics and Molecular Biology","cited_by":31,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ministry of Agriculture","funders":"National Key Research and Development Program of China; National Natural Science Foundation of China","keywords":"Biology; Wilting; Point of delivery; Genetically modified crops; RNA interference; Transgene; Botany; Horticulture; Cold stress; Genetically modified tomato; Gene; Genetics","score_opus":0.009200656971402158,"score_gpt":0.23034915075342274,"score_spread":0.2211484937820206,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3131395849","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9957296,0.0011586735,0.0004394257,0.00009725634,0.00015008467,0.00012309322,0.0010036875,0.000009166997,0.0012890021],"genre_scores_gemma":[0.99503726,0.00021975035,0.0014315255,0.0003013615,0.00009331657,0.000018922883,0.0017272944,0.000013261449,0.0011573349],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9984663,0.00025302224,0.00036996766,0.00051839894,0.00008671223,0.00030559162],"domain_scores_gemma":[0.9991891,0.000060434057,0.00016304711,0.0004059434,0.000102184575,0.000079306876],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001691266,0.0001806532,0.00038219604,0.00009602241,0.000031611242,0.000006843194,0.00022100065,0.0003019771,0.00004603742],"category_scores_gemma":[0.00015410552,0.00016787692,0.0001333332,0.00020879823,0.00008066668,0.0000029625428,0.00016679478,0.00010103667,0.000011829399],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00017419303,0.0000930312,0.023312844,0.000015828575,0.00005709731,0.00004403938,0.00001770851,0.00006665157,0.971882,0.0008617145,0.0033528241,0.00012210742],"study_design_scores_gemma":[0.0006945599,0.00010910865,0.006266049,0.000046288074,0.000015362399,0.000074447,0.000045113728,0.00015531143,0.95217764,0.00004436894,0.04016031,0.00021143534],"about_ca_topic_score_codex":0.000059005997,"about_ca_topic_score_gemma":0.0013366743,"teacher_disagreement_score":0.036807485,"about_ca_system_score_codex":0.000017418686,"about_ca_system_score_gemma":0.00022727512,"threshold_uncertainty_score":0.6845822},"labels":[],"label_agreement":null},{"id":"W3133866199","doi":"10.1186/s12870-021-02894-x","title":"A gene expression atlas for kiwifruit (Actinidia chinensis) and network analysis of transcription factors","year":2021,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Plant Molecular Biology Research","field":"Agricultural and Biological Sciences","cited_by":40,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Biology; Actinidia chinensis; Actinidia; Gene; Transcriptome; Transcription factor; Computational biology; Gene regulatory network; Gene expression; Ripening; Genetics; MADS-box; Gene Annotation; Genome; Botany; Arabidopsis","score_opus":0.044910125646816165,"score_gpt":0.264623293588511,"score_spread":0.21971316794169482,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3133866199","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9972848,0.0007538861,0.0002069302,0.000098781195,0.00008549477,0.00015002492,0.0013750736,0.000018343067,0.00002661219],"genre_scores_gemma":[0.99268115,0.00021433985,0.00081472873,0.000042878284,0.00008328177,0.000013809796,0.0061034774,7.966385e-7,0.000045538378],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9988008,0.00024056579,0.00023582246,0.00036298746,0.000063272135,0.0002965283],"domain_scores_gemma":[0.9989459,0.0007641251,0.000097150885,0.000059567275,0.00006003774,0.00007321914],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00023153638,0.00012270664,0.00040579445,0.00003263781,0.00010687176,0.000010923852,0.000120964585,0.00022509584,0.000079723584],"category_scores_gemma":[0.00014258003,0.000047887967,0.0001662436,0.0004083549,0.000073444826,0.0000228252,0.000056990095,0.00008191488,0.0000010903642],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009779176,0.00002592862,0.26437965,0.000004988816,0.00011669725,0.0000017201461,0.000020870866,0.000012686594,0.7344296,0.000059989055,0.00009692913,0.0007531438],"study_design_scores_gemma":[0.00021697163,0.00030000968,0.5585134,0.000012426718,0.00022127351,0.000018890763,0.00008642985,0.00044390952,0.43614477,0.0002094499,0.003654446,0.0001780364],"about_ca_topic_score_codex":0.000071565926,"about_ca_topic_score_gemma":0.002102406,"teacher_disagreement_score":0.29828483,"about_ca_system_score_codex":0.000006326967,"about_ca_system_score_gemma":0.000013952828,"threshold_uncertainty_score":0.19528146},"labels":[],"label_agreement":null},{"id":"W3134171947","doi":"10.1186/s12870-021-02899-6","title":"Transcriptome and metabolome profiling provide insights into molecular mechanism of pseudostem elongation in banana","year":2021,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Banana Cultivation and Research","field":"Agricultural and Biological Sciences","cited_by":21,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ministry of Agriculture","funders":"","keywords":"Biology; Gibberellin; Transcriptome; Metabolome; Auxin; Mutant; Arabidopsis; Gene; Phenotype; Botany; Wild type; Cell wall; Genetics; Biochemistry; Gene expression; Metabolite","score_opus":0.029821697281750305,"score_gpt":0.24757770719682454,"score_spread":0.21775600991507424,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3134171947","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9980482,0.000986937,0.000096302756,0.0004860658,0.00005105693,0.00018851305,0.000022250175,0.000013798145,0.00010689926],"genre_scores_gemma":[0.99878025,0.00015979512,0.0006728399,0.00007945869,0.000018794992,0.000016318656,0.00022371778,6.376382e-7,0.00004820792],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99905086,0.00023353139,0.00022051106,0.00025050834,0.00008409116,0.00016048663],"domain_scores_gemma":[0.99969447,0.0001068548,0.000052427327,0.00003665162,0.00006326931,0.000046345158],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00018823147,0.000083001905,0.00019375216,0.00003450177,0.000048198082,0.0000104968685,0.00008841214,0.00013047557,0.000029721763],"category_scores_gemma":[0.00006950851,0.000032814987,0.000036083155,0.00031786528,0.00004891203,0.00004931034,0.00003570279,0.000092165086,0.000002233481],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00002160163,0.000031337975,0.00652434,0.0000211819,0.000007237937,0.000008569935,0.000093292125,0.0000010696062,0.9527705,0.037097257,0.0000025409952,0.0034210866],"study_design_scores_gemma":[0.00034397817,0.00014672204,0.052507613,0.0000293409,0.000006724247,0.000016433292,0.00054259266,0.00039460298,0.93938005,0.0048380564,0.0016453472,0.00014852872],"about_ca_topic_score_codex":0.00026576294,"about_ca_topic_score_gemma":0.0025693339,"teacher_disagreement_score":0.045983274,"about_ca_system_score_codex":0.0000105020345,"about_ca_system_score_gemma":0.000026270387,"threshold_uncertainty_score":0.14337486},"labels":[],"label_agreement":null},{"id":"W3152555201","doi":"10.1186/s12870-021-02972-0","title":"Genome-wide identification and functional characterization of LEA genes during seed development process in linseed flax (Linum usitatissimum L.)","year":2021,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Phytoestrogen effects and research","field":"Medicine","cited_by":34,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Biotechnology Research Institute","funders":"Chinese Academy of Agricultural Sciences; Science and Technology Department of Ningxia","keywords":"Linum; Biology; Gene; Genome; Arabidopsis; Gene family; Genetics; Phylogenetic tree; Intron; Botany; Mutant","score_opus":0.02827850565553305,"score_gpt":0.2784203182292379,"score_spread":0.2501418125737049,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3152555201","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9986655,0.00026886328,0.00062572747,0.000091812064,0.00007509894,0.0002165813,0.000032372907,0.000010626173,0.000013398379],"genre_scores_gemma":[0.99767333,0.00010518364,0.00021141468,0.000018677485,0.000058553924,0.00002749217,0.0016597825,0.000006799218,0.00023878009],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99921626,0.00006928578,0.00025935762,0.00021626179,0.0000880229,0.00015078396],"domain_scores_gemma":[0.999623,0.00006603343,0.00007776859,0.00007552394,0.00010967299,0.00004797204],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001746441,0.00007569855,0.00018933375,0.00013562081,0.000046585945,0.0000067393594,0.00002705776,0.0000856678,0.000024015872],"category_scores_gemma":[0.00009112958,0.00006245698,0.000016242586,0.00014486769,0.000041786418,0.000035557714,0.000031339237,0.000079019446,0.000005109862],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00016109858,0.00005205259,0.37854534,0.000248114,0.000017927494,0.00001171975,0.0001237295,0.00000663355,0.62066305,0.000007767768,2.5357616e-7,0.00016227255],"study_design_scores_gemma":[0.00051745836,0.000028619394,0.6760404,0.000039534305,0.0000063945395,0.000052495365,0.000041328603,0.00013997713,0.3230036,0.000010303995,0.00007672172,0.000043188313],"about_ca_topic_score_codex":0.0000035866085,"about_ca_topic_score_gemma":0.000034689263,"teacher_disagreement_score":0.2976595,"about_ca_system_score_codex":0.000031321968,"about_ca_system_score_gemma":0.00028901055,"threshold_uncertainty_score":0.25469217},"labels":[],"label_agreement":null},{"id":"W3161077318","doi":"10.1186/s12870-021-03005-6","title":"Retraction Note: Contribution of anthocyanin pathways to fruit flesh coloration in pitayas","year":2021,"lang":"en","type":"retraction","venue":"BMC Plant Biology","topic":"Botanical Research and Applications","field":"Agricultural and Biological Sciences","cited_by":0,"is_retracted":true,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ministry of Agriculture","funders":"","keywords":"Flesh; Biology; Notice; Anthocyanin; Botany; Horticulture; Law","score_opus":0.05911819049561718,"score_gpt":0.3079498982164454,"score_spread":0.24883170772082824,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3161077318","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9695888,0.002556812,0.0012738145,0.0035456372,0.002695053,0.0031073813,0.014012287,0.000162979,0.0030572016],"genre_scores_gemma":[0.9742354,0.0029507207,0.00024365947,0.00011028603,0.0009350815,0.00017195794,0.020962555,0.0000025496727,0.0003877957],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9980376,0.0003379251,0.0005123127,0.0005051379,0.00022869512,0.0003783249],"domain_scores_gemma":[0.9982446,0.0010209483,0.00026914495,0.0000958759,0.00023671541,0.00013270411],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00061659736,0.00019001994,0.00046304258,0.000050723982,0.00010025008,0.000030263931,0.00022229805,0.001260758,0.00033164723],"category_scores_gemma":[0.0010593934,0.00009070167,0.00011755503,0.0006310431,0.000056365327,0.00006822524,0.00007739018,0.0006524177,0.0000837732],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00026132763,0.00025917482,0.002108986,0.00003633142,0.000013541314,0.000006858246,0.000014413531,0.000004364504,0.93929636,0.0035455194,0.010406218,0.044046927],"study_design_scores_gemma":[0.00053241657,0.0017687646,0.14645644,0.00039670506,0.000043539483,0.000042707397,0.00015520674,0.0003174088,0.04144568,0.0021758329,0.8059531,0.00071219186],"about_ca_topic_score_codex":0.000867583,"about_ca_topic_score_gemma":0.02041288,"teacher_disagreement_score":0.89785063,"about_ca_system_score_codex":0.00019919469,"about_ca_system_score_gemma":0.00011928332,"threshold_uncertainty_score":0.99746203},"labels":[{"model":"gemma","categories":[],"domain":null,"study_design":"not_applicable","genre":"other","about_ca_system":false,"about_ca_topic":false,"confidence":"high"},{"model":"gpt","categories":["research_integrity"],"domain":null,"study_design":"not_applicable","genre":"editorial","about_ca_system":false,"about_ca_topic":false,"confidence":"high"}],"label_agreement":"split"},{"id":"W3162856926","doi":"10.1186/s12870-021-02995-7","title":"Ethylene enhances root water transport and aquaporin expression in trembling aspen (Populus tremuloides) exposed to root hypoxia","year":2021,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Plant responses to water stress","field":"Agricultural and Biological Sciences","cited_by":16,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"Natural Sciences and Engineering Research Council of Canada; China Scholarship Council; Shandong University","keywords":"Aquaporin; Ethylene; Transpiration; Stomatal conductance; Aerenchyma; Biology; Water transport; Hypoxia (environmental); Photosynthesis; Botany; Hydraulic conductivity; Plant physiology; Horticulture; Cell biology; Chemistry; Water flow; Biochemistry; Oxygen; Ecology; Soil water","score_opus":0.033956811783145725,"score_gpt":0.23870484053306232,"score_spread":0.2047480287499166,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3162856926","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9981226,0.00043290036,0.00002062141,0.00050159654,0.00019206111,0.0002192214,0.000277523,0.00005728075,0.00017624722],"genre_scores_gemma":[0.99792296,0.000092027425,0.00032235862,0.00009613113,0.00014461674,0.00003532262,0.0009854848,0.000002077982,0.00039905074],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9978626,0.000325151,0.00040652222,0.0006840143,0.00012824182,0.000593521],"domain_scores_gemma":[0.99929285,0.0003466335,0.000057403795,0.00009688729,0.000033114153,0.00017309684],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00032370802,0.00025584083,0.00042350148,0.00005305817,0.00010702428,0.000037687347,0.0002683165,0.0002049913,0.00020616734],"category_scores_gemma":[0.00006413039,0.00009543245,0.00006254744,0.00022165515,0.000044227276,0.00010008312,0.00012283043,0.00016469549,0.00003780338],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005008571,0.00006135753,0.08902657,0.000009633855,0.0000056062813,0.00014270186,0.00019898647,0.000008967015,0.90112597,0.000011762065,0.0000259714,0.008881625],"study_design_scores_gemma":[0.00027871635,0.00015150705,0.31541067,0.00005616716,0.000005688053,0.00008015442,0.000101907855,0.000012551668,0.67698765,0.00008321035,0.0066028885,0.00022887034],"about_ca_topic_score_codex":0.00064116286,"about_ca_topic_score_gemma":0.121369876,"teacher_disagreement_score":0.2263841,"about_ca_system_score_codex":0.000024254598,"about_ca_system_score_gemma":0.000018538685,"threshold_uncertainty_score":0.89466286},"labels":[],"label_agreement":null},{"id":"W3167575597","doi":"10.1186/s12870-021-03007-4","title":"Hybridization and introgression in sympatric and allopatric populations of four oak species","year":2021,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Genetic diversity and population structure","field":"Biochemistry, Genetics and Molecular Biology","cited_by":42,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"Priority Academic Program Development of Jiangsu Higher Education Institutions; National Natural Science Foundation of China; Nanjing Forestry University","keywords":"Introgression; Allopatric speciation; Biology; Sympatric speciation; Hybrid; Sympatry; Evolutionary biology; Population; Zoology; Botany; Genetics; Gene","score_opus":0.028771702943581536,"score_gpt":0.24197530781136248,"score_spread":0.21320360486778095,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3167575597","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99757934,0.0013722532,0.00062211073,0.000059575646,0.00007900983,0.00005135642,0.00014677312,0.0000024829649,0.000087086286],"genre_scores_gemma":[0.99624807,0.0006080264,0.00195786,0.000037750193,0.00004397077,9.668947e-7,0.0010195235,0.0000025778686,0.000081276026],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99953306,0.00007015362,0.00012397667,0.00016522575,0.00002937225,0.00007820756],"domain_scores_gemma":[0.99979424,0.00001321025,0.00005677912,0.000076916054,0.00003337787,0.000025445857],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000051647265,0.00006039777,0.000099530786,0.00006721021,0.00003115221,0.00000531479,0.000031533607,0.00010448719,0.000012224582],"category_scores_gemma":[0.00006680804,0.00005644382,0.00001528865,0.000094859366,0.000039568593,0.0000020613038,0.00007972074,0.00003120148,3.9328617e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00002619602,0.0000093161525,0.8438012,0.000018247836,0.000005289402,0.0000022605436,0.000022382188,0.00006304269,0.15421072,0.0008722824,0.00010390651,0.00086518016],"study_design_scores_gemma":[0.0004789508,0.000069178495,0.9802158,0.000009612343,0.000014681297,0.000085065934,0.00008280914,0.00011217122,0.012949939,0.0005176611,0.005369407,0.000094728275],"about_ca_topic_score_codex":0.000016068036,"about_ca_topic_score_gemma":0.00018362526,"teacher_disagreement_score":0.14126077,"about_ca_system_score_codex":0.0000026279342,"about_ca_system_score_gemma":0.00002634278,"threshold_uncertainty_score":0.23017122},"labels":[],"label_agreement":null},{"id":"W3172678489","doi":"10.1186/s12870-021-03234-9","title":"Oxidative and salt stresses alter the 26S proteasome holoenzyme and associated protein profiles in Arabidopsis thaliana","year":2021,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Ubiquitin and proteasome pathways","field":"Biochemistry, Genetics and Molecular Biology","cited_by":16,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Proteasome; Biology; Cell biology; Arabidopsis; Proteostasis; Protein subunit; Arabidopsis thaliana; Ubiquitin; Chaperone (clinical); Abiotic stress; Biochemistry; Mutant; Gene","score_opus":0.020652076300154844,"score_gpt":0.24810746313395393,"score_spread":0.2274553868337991,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3172678489","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9955234,0.0024690803,0.000034534867,0.00045852485,0.000040895564,0.0006759211,0.0005096871,0.000013275523,0.00027471685],"genre_scores_gemma":[0.9976461,0.00030558635,0.0003664251,0.00024644198,0.00009166273,0.0002562141,0.0006437419,0.000014272988,0.0004295839],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9985055,0.00046671068,0.0002003898,0.00046005612,0.000058173002,0.00030922436],"domain_scores_gemma":[0.9995003,0.000069019494,0.000104551225,0.0002132426,0.00005365255,0.00005927521],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00029723585,0.00018520423,0.00022036774,0.000037485428,0.000088905916,0.000031402305,0.00012296047,0.00024308152,0.000022608261],"category_scores_gemma":[0.00042659912,0.00012942015,0.000034278703,0.00009710165,0.00019824364,0.0000050765266,0.00019368973,0.00016135548,0.0000038051428],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001051308,0.0000642602,0.051135395,0.000046216115,0.000049751317,0.00001720525,0.00010529533,8.2225387e-7,0.9471585,0.0006171143,0.0002523539,0.00044794127],"study_design_scores_gemma":[0.000647118,0.00025785642,0.023976294,0.00006649631,0.000011873829,0.000073399744,0.00019624246,0.000027516255,0.9705485,0.000584182,0.0033877166,0.00022279263],"about_ca_topic_score_codex":0.00007075156,"about_ca_topic_score_gemma":0.00079487887,"teacher_disagreement_score":0.027159099,"about_ca_system_score_codex":0.000009271016,"about_ca_system_score_gemma":0.000115537936,"threshold_uncertainty_score":0.5277601},"labels":[],"label_agreement":null},{"id":"W3189267602","doi":"10.1186/s12870-021-03066-7","title":"RNA-Seq analysis reveals potential regulators of programmed cell death and leaf remodelling in lace plant (Aponogeton madagascariensis)","year":2021,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Plant Gene Expression Analysis","field":"Biochemistry, Genetics and Molecular Biology","cited_by":10,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Prince Edward Island; Dalhousie University","funders":"Natural Sciences and Engineering Research Council of Canada; Dalhousie University","keywords":"Biology; Programmed cell death; Computational biology; Botany; Cell biology; Genetics; Apoptosis","score_opus":0.01428125814593575,"score_gpt":0.2378357909420437,"score_spread":0.22355453279610796,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3189267602","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9944783,0.0012252127,0.0033614023,0.000046815985,0.000072676936,0.00012981481,0.00046693135,0.000011833925,0.00020700574],"genre_scores_gemma":[0.9893166,0.0007756484,0.0058301142,0.0000773438,0.000058747446,0.000010166125,0.0032834904,0.00001536518,0.00063252926],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9978621,0.00036189065,0.00052846427,0.0007256273,0.000124295,0.0003976059],"domain_scores_gemma":[0.99901474,0.000056848097,0.00025691523,0.00046089524,0.000085930915,0.00012469153],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00041341936,0.00023723193,0.00060001574,0.00027120355,0.000051569914,0.000016698077,0.00019094355,0.0003895617,0.00001754653],"category_scores_gemma":[0.0000941072,0.00021542117,0.00022360617,0.00039952295,0.00008217904,0.000003491618,0.00020632871,0.0001297149,0.0000016477053],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00023523321,0.000081509614,0.07247237,0.00003194491,0.0002869869,0.00004512519,0.000040846622,0.0023976392,0.92377764,0.00005728022,0.00043442953,0.00013901289],"study_design_scores_gemma":[0.0010478977,0.00014167726,0.007575447,0.00003777992,0.0006150459,0.00014912558,0.00018894448,0.010857369,0.9763384,0.00013646504,0.002466898,0.0004449531],"about_ca_topic_score_codex":0.00017334674,"about_ca_topic_score_gemma":0.00093478203,"teacher_disagreement_score":0.06489692,"about_ca_system_score_codex":0.000018106424,"about_ca_system_score_gemma":0.00013102566,"threshold_uncertainty_score":0.878462},"labels":[],"label_agreement":null},{"id":"W3196047829","doi":"10.1186/s12870-021-03167-3","title":"Integrative analysis of metabolome and transcriptome profiles provides insight into the fruit pericarp pigmentation disorder caused by ‘Candidatus Liberibacter asiaticus’ infection","year":2021,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Phytoplasmas and Hemiptera pathogens","field":"Agricultural and Biological Sciences","cited_by":13,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ministry of Agriculture","funders":"National Key Research and Development Program of China; Guangdong Academy of Agricultural Sciences","keywords":"Biology; Carotenoid; Metabolome; Transcriptome; Chlorophyll; Botany; Phytoene; Population; Horticulture; Food science; Metabolite; Gene; Genetics; Lycopene; Gene expression; Biochemistry","score_opus":0.014262246467227792,"score_gpt":0.22934876954311562,"score_spread":0.21508652307588783,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3196047829","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9977339,0.0008633246,0.00006250806,0.00040036396,0.00006434904,0.00017880076,0.000577861,0.000016806698,0.00010211511],"genre_scores_gemma":[0.9970536,0.0005265691,0.00008902439,0.00010862528,0.000034288296,0.000054021213,0.0020226429,8.318876e-7,0.00011039483],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99905527,0.0002291344,0.00022743737,0.00026982182,0.0000671982,0.00015114134],"domain_scores_gemma":[0.9995017,0.00023217025,0.000115097246,0.000050557006,0.00006160482,0.000038861213],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00010136023,0.00013553335,0.00031944824,0.000030087855,0.00012948015,0.00003329766,0.00007038537,0.000098207165,0.00012323543],"category_scores_gemma":[0.000040335177,0.00004359533,0.00010572084,0.00052050024,0.000109306326,0.00008991594,0.000031549895,0.000087364635,0.0000014660455],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00002449764,0.00005166507,0.3766735,0.000006914121,0.00018591869,5.47611e-7,0.0016801419,8.9915306e-7,0.6176989,0.00019435096,0.00004657855,0.0034360802],"study_design_scores_gemma":[0.00019951802,0.00024810105,0.89635086,0.0000104358505,0.00045802767,0.0000047359927,0.0010280084,0.00021171334,0.07983822,0.0001660231,0.021306321,0.000178039],"about_ca_topic_score_codex":0.00036259505,"about_ca_topic_score_gemma":0.011438497,"teacher_disagreement_score":0.5378607,"about_ca_system_score_codex":0.000012516485,"about_ca_system_score_gemma":0.000014152236,"threshold_uncertainty_score":0.638295},"labels":[],"label_agreement":null},{"id":"W3198023941","doi":"10.1186/s12870-021-03187-z","title":"Transcriptional responses to Fusarium oxysporum f. sp. lycopersici (Sacc.) Snyder &amp; Hansen infection in three Colombian tomato cultivars","year":2021,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Plant-Microbe Interactions and Immunity","field":"Agricultural and Biological Sciences","cited_by":14,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"Universidad de Caldas; University of Alberta","keywords":"Biology; Fusarium oxysporum f.sp. lycopersici; Fusarium oxysporum; Cultivar; Botany; Horticulture; Fusarium wilt","score_opus":0.05305878779644486,"score_gpt":0.26532549757643203,"score_spread":0.21226670977998718,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3198023941","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9955283,0.00013956828,0.00006191714,0.0017718766,0.0004995151,0.00020190023,0.0013257656,0.000059541628,0.00041161483],"genre_scores_gemma":[0.9958202,0.00006925274,0.00032344324,0.0008528657,0.00013142375,0.000031745523,0.0018176204,0.0000015889804,0.00095185917],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99857223,0.00030185122,0.00029154326,0.00037562044,0.000076889744,0.00038183824],"domain_scores_gemma":[0.99932027,0.00036057507,0.00005953333,0.00008767113,0.00007839287,0.000093542876],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00023067418,0.00017494553,0.00028125616,0.00005480431,0.00020426145,0.000052155337,0.00016824581,0.00021277032,0.0007863638],"category_scores_gemma":[0.00011517516,0.0000856527,0.00013377913,0.0003690386,0.000054233464,0.0001136244,0.00007127712,0.00022510547,0.00024952058],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003661435,0.00018300665,0.14694856,0.0000039593324,0.000049545382,0.000014458048,0.0000699606,0.000008643174,0.8500437,0.0002798989,0.0015096433,0.0005224812],"study_design_scores_gemma":[0.00023792159,0.00019668556,0.83397526,0.000022950824,0.000033317694,0.00036311636,0.00017227675,0.00002223014,0.013452714,0.0002406033,0.15102279,0.00026013574],"about_ca_topic_score_codex":0.006900884,"about_ca_topic_score_gemma":0.20641166,"teacher_disagreement_score":0.836591,"about_ca_system_score_codex":0.0000635123,"about_ca_system_score_gemma":0.000050428,"threshold_uncertainty_score":0.9997122},"labels":[],"label_agreement":null},{"id":"W3201084854","doi":"10.1186/s12870-021-03138-8","title":"Development of a Csy4-processed guide RNA delivery system with soybean-infecting virus ALSV for genome editing","year":2021,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"CRISPR and Genetic Engineering","field":"Biochemistry, Genetics and Molecular Biology","cited_by":31,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Agriculture and Agri-Food Canada","funders":"Natural Science Foundation of Hebei Province; Agriculture and Agri-Food Canada; Natural Sciences and Engineering Research Council of Canada; National Natural Science Foundation of China; Iowa State University","keywords":"Biology; Genome editing; Guide RNA; Cas9; CRISPR; Genome; Nicotiana benthamiana; Computational biology; RNA editing; Genetics; Plant virus; Genome engineering; Gene; Virus; RNA","score_opus":0.014436264470276527,"score_gpt":0.2790246146358949,"score_spread":0.2645883501656184,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3201084854","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.78915876,0.0010567982,0.20908721,0.0000048076477,0.00015180952,0.00015081621,0.000085166765,0.00002051266,0.00028414238],"genre_scores_gemma":[0.95248705,0.00002685114,0.046333604,0.000029412287,0.00029528036,0.000048348167,0.00070114963,0.000020728856,0.000057583406],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.998972,0.000025483007,0.00033008802,0.0003351001,0.000052014795,0.00028533893],"domain_scores_gemma":[0.9994663,0.00004634064,0.000122064004,0.00017052618,0.00014286986,0.000051906973],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00020698762,0.000156941,0.00023267845,0.000039521565,0.00007987376,0.000009975387,0.000110680594,0.0001392562,0.0000035741991],"category_scores_gemma":[0.00008321045,0.00013827057,0.000056629095,0.00006345767,0.000025113355,0.0000021282606,0.000081730046,0.000047800222,0.0000015003687],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000049597053,0.000018550989,0.0011065151,0.00030079452,0.0000896676,0.0000043688715,0.000087592656,0.00039192053,0.99709374,0.000052207426,0.000037460384,0.00076759345],"study_design_scores_gemma":[0.00055801665,0.0001190614,0.00065312,0.00006794206,0.000024255514,0.000095110714,0.00053923315,0.00032903635,0.98206484,0.0000015245174,0.01535186,0.00019599471],"about_ca_topic_score_codex":0.00001432514,"about_ca_topic_score_gemma":0.00036872822,"teacher_disagreement_score":0.1633283,"about_ca_system_score_codex":0.000020379797,"about_ca_system_score_gemma":0.0002596832,"threshold_uncertainty_score":0.563851},"labels":[],"label_agreement":null},{"id":"W3202047337","doi":"10.1186/s12870-021-03201-4","title":"Transcriptomic analysis of differentially expressed genes in leaves and roots of two alfalfa (Medicago sativa L.) cultivars with different salt tolerance","year":2021,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Plant Stress Responses and Tolerance","field":"Agricultural and Biological Sciences","cited_by":28,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canadian Light Source (Canada); Agriculture and Agri-Food Canada; University of Saskatchewan","funders":"Agriculture and Agri-Food Canada; Natural Sciences and Engineering Research Council of Canada; College of Agriculture and Bioresources, University of Saskatchewan; Western Canada Research Grid; Compute Canada","keywords":"Biology; Medicago sativa; Cultivar; Gene; RNA-Seq; Transcriptome; Botany; Medicago; Horticulture; Gene expression; Genetics","score_opus":0.019610118854439414,"score_gpt":0.2347252999614672,"score_spread":0.2151151811070278,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3202047337","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9968235,0.0012665311,0.00010947059,0.00010572551,0.00004165144,0.00010142031,0.0015185091,0.000010239555,0.000022972163],"genre_scores_gemma":[0.99830574,0.0010301453,0.00013410738,0.00002742546,0.000023327593,0.000010623658,0.00042971733,9.701573e-7,0.00003795999],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9986497,0.00024911034,0.00038035287,0.00036434585,0.00011755755,0.00023892906],"domain_scores_gemma":[0.99918747,0.0004620187,0.00017326792,0.00007473843,0.00003837229,0.00006413046],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00006830873,0.00017407698,0.0006681598,0.000056009776,0.000036406705,0.00000883438,0.00016118107,0.00009698063,0.00008323928],"category_scores_gemma":[0.000020974383,0.00006544939,0.000100680816,0.00036507397,0.00015920748,0.000032019394,0.00003997725,0.000082826766,2.5794796e-7],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00038370833,0.000094310875,0.3709022,0.000019033503,0.00010235065,0.000008935923,0.00004973174,0.000043928514,0.6241909,0.000115054696,0.000003733882,0.004086054],"study_design_scores_gemma":[0.0005881212,0.00016566706,0.87410724,0.000079782534,0.00010179713,0.000010477097,0.00007565538,0.0007078094,0.123800956,0.00005522632,0.00016858637,0.00013867258],"about_ca_topic_score_codex":0.00057839113,"about_ca_topic_score_gemma":0.034022816,"teacher_disagreement_score":0.50320506,"about_ca_system_score_codex":0.0000064736655,"about_ca_system_score_gemma":0.000017163266,"threshold_uncertainty_score":0.9836038},"labels":[],"label_agreement":null},{"id":"W3207332598","doi":"10.1186/s12870-021-03229-6","title":"Developing an efficient DNA barcoding system to differentiate between Lilium species","year":2021,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Chemical synthesis and alkaloids","field":"Chemistry","cited_by":22,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Key Research and Development Program of China; Directorate for Biological Sciences; University of Toronto; National Natural Science Foundation of China","keywords":"DNA barcoding; Lilium; Biology; Barcode; Endangered species; Chloroplast DNA; Ornamental plant; Botany; Bulb; Genetic marker; Evolutionary biology; Genome; Genetics; Gene; Ecology","score_opus":0.05312379291212316,"score_gpt":0.25773079267476223,"score_spread":0.20460699976263907,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3207332598","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9955445,0.0000796249,0.0013114762,0.000093830226,0.00015002035,0.00003587217,0.0003160094,0.00011882043,0.0023498824],"genre_scores_gemma":[0.99747396,0.0000062695894,0.0011760119,0.000040589977,0.0005045345,0.000010458642,0.00046379294,0.000015010605,0.00030935684],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9987303,0.000047498477,0.00029875492,0.00044218014,0.00008844381,0.0003928221],"domain_scores_gemma":[0.99921703,0.000276413,0.000060232054,0.00025954604,0.000034078057,0.00015272226],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009830639,0.00017774953,0.00035676497,0.000033186985,0.00010220048,0.000040475865,0.00022830059,0.000160454,0.00024131102],"category_scores_gemma":[0.00010022187,0.00014777247,0.00007876029,0.00008915501,0.00003011806,0.000013545639,0.00020727317,0.00011078433,0.0000658675],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000013769028,0.00002472235,0.04229257,0.00017819072,0.00002875161,0.000013771653,0.000055915378,0.000005771398,0.953074,0.0037381165,0.0000416272,0.00053282815],"study_design_scores_gemma":[0.00016909942,0.000009033216,0.007329097,0.00020619213,0.000022173312,0.000026480127,0.00034644254,0.00013244002,0.98353165,0.00003146198,0.007918821,0.00027711375],"about_ca_topic_score_codex":0.000017051245,"about_ca_topic_score_gemma":0.000034185625,"teacher_disagreement_score":0.034963474,"about_ca_system_score_codex":0.000121843485,"about_ca_system_score_gemma":0.00005775834,"threshold_uncertainty_score":0.60259867},"labels":[],"label_agreement":null},{"id":"W3207533313","doi":"10.1186/s12870-021-03258-1","title":"The effects of tea plants-soybean intercropping on the secondary metabolites of tea plants by metabolomics analysis","year":2021,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Agronomic Practices and Intercropping Systems","field":"Agricultural and Biological Sciences","cited_by":57,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba","funders":"Earmarked Fund for China Agriculture Research System; Government of Jiangsu Province; National Natural Science Foundation of China","keywords":"Intercropping; Biology; Photosynthesis; Primary metabolite; Botany; Nutrient; Agronomy; Metabolism; Biochemistry","score_opus":0.017961147516843884,"score_gpt":0.22475254366501116,"score_spread":0.20679139614816727,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3207533313","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99261606,0.004182748,0.000019370036,0.0004353155,0.00044735215,0.00017643193,0.0011777849,0.000016085196,0.00092886674],"genre_scores_gemma":[0.9978869,0.0009832644,0.000022793956,0.00020633564,0.00011637191,0.000013867752,0.00041939248,0.0000015209205,0.00034955965],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99794006,0.00076584535,0.00053606834,0.0003367079,0.00010881168,0.00031250264],"domain_scores_gemma":[0.99371326,0.005538629,0.00047440355,0.00017399485,0.000048879665,0.00005082681],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00071969937,0.00019605414,0.00058270566,0.000026731912,0.00020726347,0.000041800235,0.0005561366,0.00014339964,0.00010221342],"category_scores_gemma":[0.00042716376,0.000057045334,0.00028582403,0.00021972989,0.00017756541,0.000059349735,0.00015835572,0.0002309326,0.000012411777],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015329412,0.00008095333,0.009959561,0.000024216737,0.0009238221,0.0000027345127,0.00014165626,0.000001294614,0.9764988,0.0017031885,0.0032571272,0.007253355],"study_design_scores_gemma":[0.00043368826,0.0006350385,0.0615606,0.00015020717,0.00053277856,0.000067203844,0.004035479,0.0003094753,0.7337548,0.00026575057,0.19781317,0.00044179006],"about_ca_topic_score_codex":0.0007784766,"about_ca_topic_score_gemma":0.0011198974,"teacher_disagreement_score":0.24274397,"about_ca_system_score_codex":0.00001545651,"about_ca_system_score_gemma":0.000027733693,"threshold_uncertainty_score":0.23262411},"labels":[],"label_agreement":null},{"id":"W3208142459","doi":"10.1186/s12870-021-03227-8","title":"Phenotypic variation of floral organs in flowering crabapples and its taxonomic significance","year":2021,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Plant and animal studies","field":"Agricultural and Biological Sciences","cited_by":17,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"Government of Jiangsu Province","keywords":"Biology; Variation (astronomy); Phenotype; Botany; Evolutionary biology; Genetics; Gene","score_opus":0.05782295891114392,"score_gpt":0.2072949352880241,"score_spread":0.14947197637688017,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3208142459","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99855644,0.00081061595,0.0000064650035,0.000101077894,0.000044955515,0.00005564221,0.00023182736,0.000011195379,0.00018178497],"genre_scores_gemma":[0.99939567,0.00029442922,0.00010704839,0.000022579225,0.00007352975,0.0000049605997,0.000073530144,2.847613e-7,0.000027996097],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9995097,0.000042264324,0.00012940956,0.00016603695,0.000022406079,0.00013017973],"domain_scores_gemma":[0.99975085,0.00016337102,0.000044071505,0.000009176655,0.000014180728,0.000018370605],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000073796415,0.000065655586,0.00015746127,0.0000073467,0.000042705382,0.0000058152245,0.00005427753,0.00005634552,0.000050523726],"category_scores_gemma":[0.000040011066,0.000028305605,0.000017282493,0.00009232535,0.00002081391,0.000023504312,0.000049586557,0.00004064096,0.0000048649467],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000030342608,0.000017499407,0.08182061,0.000008085575,0.000004706067,0.000002798179,0.000033602002,0.0000027015788,0.91594386,0.0013388074,0.000013295638,0.0007836753],"study_design_scores_gemma":[0.00011245342,0.00006426395,0.97431856,0.000016308119,0.0000043186387,0.000009665661,0.00012915669,0.00016898933,0.023535477,0.00021881955,0.001328542,0.00009341356],"about_ca_topic_score_codex":0.00015274914,"about_ca_topic_score_gemma":0.013214838,"teacher_disagreement_score":0.89249796,"about_ca_system_score_codex":0.0000068207823,"about_ca_system_score_gemma":0.00000776185,"threshold_uncertainty_score":0.73741895},"labels":[],"label_agreement":null},{"id":"W3209520246","doi":"10.1186/s12870-021-03270-5","title":"Developing Chenopodium ficifolium as a potential B genome diploid model system for genetic characterization and improvement of allotetraploid quinoa (Chenopodium quinoa)","year":2021,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Seed and Plant Biochemistry","field":"Agricultural and Biological Sciences","cited_by":16,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"Brigham Young University","keywords":"Biology; Chenopodium quinoa; Ploidy; Locus (genetics); Allele; Genetics; Chenopodium; Genome; Genetic variation; Population; Trait; Genetic diversity; Gene; Botany","score_opus":0.02143745984353232,"score_gpt":0.21135187861491853,"score_spread":0.1899144187713862,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3209520246","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99377435,0.0004344203,0.0025231973,0.00015956565,0.0002039947,0.00030284357,0.0025092766,0.000052698586,0.000039672843],"genre_scores_gemma":[0.99240905,0.0002215018,0.0012624784,0.00015447811,0.00030958123,0.000039277045,0.0054145996,0.0000028398758,0.00018622301],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99862146,0.00004176533,0.00039182862,0.00047651795,0.00009956477,0.0003688809],"domain_scores_gemma":[0.999421,0.00009740968,0.0001987278,0.00007701719,0.0001138971,0.000091939015],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001347711,0.00021236458,0.0003343322,0.000022332155,0.0001367914,0.00003313871,0.00018387519,0.00026027573,0.000023431363],"category_scores_gemma":[0.000028955457,0.00010805629,0.00008377901,0.00012636841,0.00005431573,0.000035775447,0.00010525056,0.00007498945,0.0000031078107],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012552874,0.000039639104,0.0011518754,0.00018902551,0.000033211545,0.0000042948677,0.000036559006,0.000011051781,0.9967365,0.0006027796,0.0000035937996,0.0010659386],"study_design_scores_gemma":[0.0006033678,0.0004793435,0.036385886,0.00008144017,0.00007609814,0.00023566312,0.0004990246,0.0025730128,0.95657635,0.0002410672,0.001734701,0.00051406166],"about_ca_topic_score_codex":0.00007835248,"about_ca_topic_score_gemma":0.000075493335,"teacher_disagreement_score":0.040160168,"about_ca_system_score_codex":0.00003579555,"about_ca_system_score_gemma":0.00007931701,"threshold_uncertainty_score":0.44064075},"labels":[],"label_agreement":null},{"id":"W3210667161","doi":"10.1186/s12870-021-03281-2","title":"Elucidation of the molecular responses during the primary infection of wild blueberry phenotypes with Monilinia vaccinii-corymbosi under field conditions","year":2021,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Fungal Plant Pathogen Control","field":"Agricultural and Biological Sciences","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Biology; Ericaceae; Phenotype; Botany; Genetics; Gene","score_opus":0.012018811619820135,"score_gpt":0.20897881518859973,"score_spread":0.1969600035687796,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3210667161","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9983831,0.00018446446,0.00003069143,0.00059359585,0.00011103722,0.00016838715,0.00030506105,0.000015346142,0.00020831688],"genre_scores_gemma":[0.9993367,0.000029277688,0.000034814464,0.00027996625,0.00004767641,0.0000126128,0.00015709129,8.0390214e-7,0.000101023725],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9991234,0.0003040177,0.00019547329,0.000169095,0.00008375786,0.00012427528],"domain_scores_gemma":[0.99867505,0.000980306,0.00016154103,0.0000964485,0.00006914898,0.000017515695],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013784715,0.000087979264,0.00015643431,0.000010342478,0.00012385334,0.00000824554,0.00013604385,0.0001003305,0.000063259446],"category_scores_gemma":[0.0001401188,0.000026882566,0.00007014443,0.00018178517,0.000064627966,0.00003703893,0.00005897372,0.00010756656,0.000002283676],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00021874227,0.000034863355,0.12202982,0.000011797499,0.000025048053,0.0000018407969,0.000013515564,0.00006912464,0.8767424,0.0007048954,0.00003123225,0.00011667354],"study_design_scores_gemma":[0.00014778432,0.00013089128,0.6759878,0.000024980998,0.000026583119,0.000048929433,0.000037512174,0.000013507601,0.32311887,0.00017077218,0.00023503938,0.000057371075],"about_ca_topic_score_codex":0.00018803614,"about_ca_topic_score_gemma":0.0027870622,"teacher_disagreement_score":0.55395794,"about_ca_system_score_codex":0.000010674641,"about_ca_system_score_gemma":0.00003935197,"threshold_uncertainty_score":0.15552461},"labels":[],"label_agreement":null},{"id":"W3217432117","doi":"10.1186/s12870-021-03317-7","title":"Identification of cold tolerance QTLs at the bud burst stage in 211 rice landraces by GWAS","year":2021,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Genetic Mapping and Diversity in Plants and Animals","field":"Biochemistry, Genetics and Molecular Biology","cited_by":36,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ministry of Agriculture","funders":"National Key Research and Development Program of China; Jiangxi Provincial Department of Science and Technology","keywords":"Biology; Japonica rice; Seedling; Population; Quantitative trait locus; Japonica; Cold tolerance; Agronomy; Genetic diversity; Crop; Genome-wide association study; Oryza sativa; Horticulture; Botany; Genotype; Gene; Genetics; Single-nucleotide polymorphism","score_opus":0.014082578963367662,"score_gpt":0.2347342204037364,"score_spread":0.22065164144036875,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3217432117","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9949577,0.0025161388,0.00016163569,0.00015737173,0.00013119585,0.00007668715,0.0013737602,0.0000038599755,0.0006216821],"genre_scores_gemma":[0.99135816,0.0008443152,0.000037168596,0.00017828877,0.00004351789,0.0000054389266,0.00083600753,0.0000033375015,0.0066937897],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99926376,0.00009824484,0.00019273732,0.00024088718,0.0000508771,0.00015347204],"domain_scores_gemma":[0.99958724,0.000045993536,0.00010903762,0.00019419285,0.00003839628,0.000025158233],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00018066783,0.00008366868,0.00013157041,0.000017243012,0.00006414393,0.000009924779,0.00015021829,0.000117464195,0.00003048444],"category_scores_gemma":[0.00004483704,0.000063368985,0.00003936185,0.000058801226,0.00007320783,0.0000014747823,0.00009966005,0.000045432538,0.0000120126615],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00005801204,0.00004171305,0.05507481,0.000026107,0.000013505121,0.0000028446684,0.000033212098,0.000054300905,0.9377397,0.0002020857,0.006719216,0.000034501707],"study_design_scores_gemma":[0.0004104026,0.00007355823,0.016480325,0.000012351971,0.000010132102,0.000018528752,0.00020265658,0.000037511338,0.8058617,0.000012613993,0.1767614,0.00011881251],"about_ca_topic_score_codex":0.00009007078,"about_ca_topic_score_gemma":0.00044586143,"teacher_disagreement_score":0.17004219,"about_ca_system_score_codex":0.000005609705,"about_ca_system_score_gemma":0.00004072649,"threshold_uncertainty_score":0.2584112},"labels":[],"label_agreement":null},{"id":"W4200348990","doi":"10.1186/s12870-021-03369-9","title":"A PIP-mediated osmotic stress signaling cascade plays a positive role in the salt tolerance of sugarcane","year":2021,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Plant Stress Responses and Tolerance","field":"Agricultural and Biological Sciences","cited_by":34,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ministry of Agriculture","funders":"","keywords":"Nicotiana benthamiana; Biology; Abscisic acid; Proline; Osmotic shock; PEG ratio; Arabidopsis; Salinity; Biochemistry; Arabidopsis thaliana; Superoxide dismutase; Botany; Cell biology; Gene; Mutant; Oxidative stress","score_opus":0.01729342064371975,"score_gpt":0.22003682861330223,"score_spread":0.20274340796958248,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4200348990","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9945862,0.0012591713,0.00000709149,0.00032140122,0.00006172329,0.00014265104,0.0033815426,0.000014578962,0.00022561244],"genre_scores_gemma":[0.99821675,0.00019300473,0.000053888012,0.00029077282,0.00009367571,0.000015194395,0.0011086242,7.933666e-7,0.0000272901],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9985292,0.00042667246,0.0002963973,0.00029588628,0.00011394061,0.0003378854],"domain_scores_gemma":[0.99791914,0.0018025774,0.00012390038,0.00006626779,0.000043114254,0.000045025587],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00018579981,0.00014093351,0.00028963745,0.000017305343,0.00007943298,0.00001714923,0.00028710288,0.00013404193,0.00008240652],"category_scores_gemma":[0.00012385046,0.000050791936,0.00007237083,0.0003131227,0.00007995913,0.00003332137,0.000051374678,0.00017122332,0.00000864707],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00037355654,0.0001593276,0.087760925,0.000017348975,0.000015691438,0.00017858145,0.0003318313,0.00012630892,0.9089708,0.0005477111,0.000043520526,0.0014743935],"study_design_scores_gemma":[0.0006937408,0.00041948777,0.8351223,0.00027812656,0.000021446802,0.00044518698,0.0015398675,0.0016470347,0.15677199,0.00048401236,0.0021934167,0.00038342807],"about_ca_topic_score_codex":0.0010571416,"about_ca_topic_score_gemma":0.009789972,"teacher_disagreement_score":0.7521988,"about_ca_system_score_codex":0.000011241114,"about_ca_system_score_gemma":0.000031272968,"threshold_uncertainty_score":0.5463034},"labels":[],"label_agreement":null},{"id":"W4200470050","doi":"10.1186/s12870-021-03336-4","title":"The key regulator LcERF056 enhances salt tolerance by modulating reactive oxygen species-related genes in Lotus corniculatus","year":2021,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Plant Stress Responses and Tolerance","field":"Agricultural and Biological Sciences","cited_by":20,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Biotechnology Research Institute","funders":"National Natural Science Foundation of China","keywords":"Biology; Lotus corniculatus; Regulator; Reactive oxygen species; Key (lock); Lotus; Gene; Botany; Cell biology; Ecology; Genetics","score_opus":0.016953561731246205,"score_gpt":0.21379335113868742,"score_spread":0.1968397894074412,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4200470050","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98984736,0.0075648967,0.00000601201,0.00052922376,0.00035150084,0.00017408459,0.00083343196,0.000049632636,0.0006438554],"genre_scores_gemma":[0.9955566,0.0018877387,0.00007713272,0.000120605306,0.00016588616,0.00002401728,0.0008232078,0.0000018937484,0.0013429174],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99798083,0.0003606093,0.0004411135,0.0005339019,0.00013415546,0.00054937764],"domain_scores_gemma":[0.9983605,0.0011706798,0.00021415978,0.00011547636,0.000057992118,0.00008120214],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00023012455,0.00022184558,0.0003412833,0.000011879203,0.00035785438,0.000060418934,0.0003111677,0.00021712988,0.00010726807],"category_scores_gemma":[0.00014318113,0.00008324841,0.0001001722,0.00033748773,0.00014116755,0.0000722512,0.00010172573,0.00021396295,0.000026778403],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00027798474,0.00005081748,0.028960427,0.0000047775197,0.000023433262,0.00003731219,0.00004734144,0.00007277643,0.95570534,0.00063005125,0.00051029015,0.013679456],"study_design_scores_gemma":[0.0005371246,0.00017985572,0.64879894,0.00010779907,0.000012897013,0.00020938889,0.0002818932,0.0028402791,0.1276315,0.0007713021,0.21807663,0.0005523633],"about_ca_topic_score_codex":0.00035620364,"about_ca_topic_score_gemma":0.0056700213,"teacher_disagreement_score":0.82807386,"about_ca_system_score_codex":0.00003938422,"about_ca_system_score_gemma":0.000033586726,"threshold_uncertainty_score":0.33947715},"labels":[],"label_agreement":null},{"id":"W4205808482","doi":"10.1186/s12870-021-03422-7","title":"Genome-wide analysis of the NAAT, DMAS, TOM, and ENA gene families in maize suggests their roles in mediating iron homeostasis","year":2022,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Plant Micronutrient Interactions and Effects","field":"Agricultural and Biological Sciences","cited_by":15,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Biotechnology Research Institute","funders":"National Natural Science Foundation of China","keywords":"Biology; Subcellular localization; Oryza sativa; Gene; Genome; Hordeum vulgare; Transporter; Efflux; Gene expression; Genetics; Biochemistry; Hordeum; Cell biology; Botany; Poaceae","score_opus":0.012646603767273099,"score_gpt":0.200595667212821,"score_spread":0.1879490634455479,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4205808482","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99685615,0.0009885336,4.858533e-7,0.00016932946,0.00007434542,0.00014060184,0.0017230948,0.000008719745,0.00003871986],"genre_scores_gemma":[0.99856955,0.00050196756,0.000014712233,0.0000863355,0.000020394988,0.000028130124,0.00076475565,5.9027457e-7,0.0000135492655],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9989062,0.00033318257,0.00024104847,0.00023410047,0.00006194171,0.00022353954],"domain_scores_gemma":[0.9987391,0.0010526046,0.0001213612,0.000054041193,0.000008157888,0.000024682464],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00034905126,0.00010656198,0.0002780375,0.00010553369,0.00012215228,0.000008389183,0.0002084916,0.000057089106,0.00006896347],"category_scores_gemma":[0.00006273429,0.000039013277,0.00007470829,0.0007414071,0.0000507175,0.000028591343,0.00020816884,0.00014184388,7.628599e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000048965332,0.000043811546,0.59417653,0.000003639661,0.000022926519,0.00000240355,0.00021011058,0.00017779268,0.40366316,0.00001509708,0.000010392746,0.00162516],"study_design_scores_gemma":[0.00013170292,0.000099555764,0.9884903,0.000006610579,0.000026282816,0.000013283411,0.0013338374,0.00031051878,0.007157534,0.000035773497,0.0022938207,0.00010081541],"about_ca_topic_score_codex":0.0012291521,"about_ca_topic_score_gemma":0.023324028,"teacher_disagreement_score":0.39650562,"about_ca_system_score_codex":0.00003913733,"about_ca_system_score_gemma":0.000008737927,"threshold_uncertainty_score":0.9944978},"labels":[],"label_agreement":null},{"id":"W4214492946","doi":"10.1186/s12870-022-03457-4","title":"The salt secretion of leaves promotes the competitiveness of Reaumuria soongarica in a desert grassland","year":2022,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Plant and animal studies","field":"Agricultural and Biological Sciences","cited_by":9,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"University of British Columbia","keywords":"Biology; Grassland; Desert (philosophy); Salt (chemistry); Secretion; Agronomy; Botany; Ecology; Agroforestry; Biochemistry","score_opus":0.04941146828916121,"score_gpt":0.22035254002723095,"score_spread":0.17094107173806974,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4214492946","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99796844,0.0005829502,7.668953e-7,0.0005306557,0.000044428176,0.0001442957,0.00033745152,0.0000072062817,0.00038383823],"genre_scores_gemma":[0.9996061,0.00019191192,0.000005918325,0.000015217591,0.00003149111,0.000026466592,0.00007529055,3.091487e-7,0.000047341557],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99921113,0.00028529193,0.00017189937,0.00011436895,0.00007058966,0.0001467215],"domain_scores_gemma":[0.9988221,0.0010152115,0.00011398616,0.000020493826,0.000018262213,0.000009955891],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00041415007,0.0000649505,0.00015576463,0.000007595101,0.00027710706,0.0000046546957,0.00023846612,0.000028601959,0.000036059555],"category_scores_gemma":[0.000056668734,0.000017073193,0.000042318094,0.0001539222,0.00015815844,0.000010517162,0.00014725776,0.00008713152,8.198212e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002499938,0.000053965527,0.6436081,0.000006640521,0.000013261744,0.0000012691565,0.000116538016,0.000002252809,0.3491378,0.005561603,0.00006810834,0.0011804708],"study_design_scores_gemma":[0.000097802964,0.00040634017,0.9844844,0.000010640249,0.0000049299397,0.000013805088,0.00085386017,0.000040753046,0.003342009,0.001639559,0.009046376,0.00005954703],"about_ca_topic_score_codex":0.00075197784,"about_ca_topic_score_gemma":0.015168151,"teacher_disagreement_score":0.34579578,"about_ca_system_score_codex":0.0000075436715,"about_ca_system_score_gemma":0.000008515372,"threshold_uncertainty_score":0.84641844},"labels":[],"label_agreement":null},{"id":"W4220970356","doi":"10.1186/s12870-022-03525-9","title":"Plastid retrograde regulation of miRNA expression in response to light stress","year":2022,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Plant Molecular Biology Research","field":"Agricultural and Biological Sciences","cited_by":19,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Institute of Genetics; Institute of Genetics and Developmental Biology, Chinese Academy of Sciences; Chinese Academy of Sciences","keywords":"Biology; microRNA; Biogenesis; Plastoquinone; Arabidopsis; Arabidopsis thaliana; Plastid; Cell biology; Genetics; Regulation of gene expression; Chloroplast; Mutant; Gene; Thylakoid","score_opus":0.025758851008882477,"score_gpt":0.25237920154791965,"score_spread":0.22662035053903717,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4220970356","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9974631,0.00009248594,0.0000052693144,0.00088948343,0.000098314384,0.00025922558,0.0010934155,0.000022844826,0.00007585479],"genre_scores_gemma":[0.9987304,0.0000068652143,0.00018048492,0.00006344104,0.00003620438,0.00006128369,0.00080184673,8.5447454e-7,0.00011860692],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9978428,0.0011084331,0.00024694638,0.0003356904,0.00014845017,0.00031770242],"domain_scores_gemma":[0.9991203,0.0006245133,0.0000872994,0.000076556775,0.00001980542,0.000071507435],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00067886873,0.00010374094,0.00020240466,0.00008290842,0.00011397373,0.0000052962387,0.00036578823,0.000115361705,0.00024087775],"category_scores_gemma":[0.00022509157,0.000045374098,0.000047885253,0.00041229703,0.000042694075,0.000019822135,0.00032848187,0.00018110324,0.000009746807],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.002322495,0.00007095558,0.123112515,0.0000026962718,0.000002803867,0.0000107542755,0.000037699323,0.00003745359,0.8729842,0.00003723345,0.0009285374,0.00045270904],"study_design_scores_gemma":[0.00027625,0.0012535469,0.76263213,0.000022904585,0.0000020673724,0.000049111608,0.00015745229,0.00005704981,0.21070293,0.00010026717,0.024590755,0.00015556549],"about_ca_topic_score_codex":0.00009834999,"about_ca_topic_score_gemma":0.0006283132,"teacher_disagreement_score":0.6622812,"about_ca_system_score_codex":0.00004023713,"about_ca_system_score_gemma":0.000020549454,"threshold_uncertainty_score":0.26374424},"labels":[],"label_agreement":null},{"id":"W4221086258","doi":"10.1186/s12870-022-03473-4","title":"ROS1-mediated decrease in DNA methylation and increase in expression of defense genes and stress response genes in Arabidopsis thaliana due to abiotic stresses","year":2022,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Plant Molecular Biology Research","field":"Agricultural and Biological Sciences","cited_by":42,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Chinese Academy of Sciences; Directorate for Biological Sciences; Institute of Genetics; National Natural Science Foundation of China; Department of Finance of Jilin Province; People's Government of Jilin Province","keywords":"Biology; DNA methylation; Arabidopsis thaliana; Arabidopsis; Gene; Gene silencing; Genetics; DNA demethylation; Gene expression; Regulation of gene expression; Abiotic stress; Promoter; Cell biology; Mutant","score_opus":0.026847262731072175,"score_gpt":0.25524848594230554,"score_spread":0.22840122321123335,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4221086258","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99547625,0.0018939374,7.6578726e-7,0.00026379505,0.000023743552,0.0003579792,0.0019681451,0.000010534171,0.0000048294764],"genre_scores_gemma":[0.9986754,0.00027223903,0.00008472098,0.00006485169,0.000012277831,0.00006157887,0.00082114106,0.000001421982,0.000006361199],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99682814,0.0019843047,0.00031921294,0.00043603274,0.00010568616,0.00032661323],"domain_scores_gemma":[0.99784815,0.0018427339,0.00008504286,0.00006994167,0.000019338771,0.00013479468],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010192922,0.00014747024,0.00032581296,0.00020358867,0.000066960274,0.000009779116,0.00018661557,0.00014780845,0.000047418554],"category_scores_gemma":[0.00086188334,0.000075058444,0.000022912582,0.00048517008,0.00010129682,0.00003698011,0.0003277273,0.00015914229,0.0000011487912],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.001640662,0.00007216607,0.43874314,0.000008161156,0.0000020415969,0.00009276013,0.000064051084,0.000025399855,0.5577723,0.0000071710097,0.0000056648237,0.0015664793],"study_design_scores_gemma":[0.00048275525,0.00039243762,0.92191696,0.000041200576,0.0000033350225,0.00007304359,0.0004281801,0.00017531594,0.07608185,0.00009317613,0.00015418282,0.00015757981],"about_ca_topic_score_codex":0.0029332722,"about_ca_topic_score_gemma":0.022914926,"teacher_disagreement_score":0.4831738,"about_ca_system_score_codex":0.000033318174,"about_ca_system_score_gemma":0.00004219813,"threshold_uncertainty_score":0.99491435},"labels":[],"label_agreement":null},{"id":"W4221129037","doi":"10.1186/s12870-022-03532-w","title":"Chromatin-remodeling factor CHR721 with non-canonical PIP-box interacts with OsPCNA in Rice","year":2022,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Nuclear Structure and Function","field":"Biochemistry, Genetics and Molecular Biology","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Institute of Genetics; National Natural Science Foundation of China; Henan Normal University","keywords":"Biology; Chromatin remodeling; Chromatin; Transcription factor; Cell biology; Genetics; Computational biology; Gene","score_opus":0.010091943538831118,"score_gpt":0.21988861252961087,"score_spread":0.20979666899077976,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4221129037","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99707675,0.0001000642,0.001534909,0.000051482864,0.00017706718,0.00016664583,0.000099271914,0.0000141029905,0.00077971694],"genre_scores_gemma":[0.9970926,0.000015823349,0.0016731714,0.00033249686,0.00014257658,0.000027342941,0.00056032045,0.000021450573,0.00013418913],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99899125,0.00008704057,0.00017314163,0.00039516238,0.00007930623,0.00027409245],"domain_scores_gemma":[0.99958473,0.000024651315,0.00009054026,0.00022472955,0.00002254485,0.00005276986],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00008317516,0.00016453907,0.00018902491,0.0000634251,0.00009284658,0.000010689166,0.00016976424,0.00010823604,0.00008499798],"category_scores_gemma":[0.000016477952,0.000120101155,0.00003386108,0.00010241173,0.0000510906,0.000004060605,0.0001366191,0.00022548443,0.000007282296],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0018413751,0.0000749036,0.030280434,0.000025966729,0.000051956005,0.000022515782,0.000108558874,0.0008280123,0.9654748,0.00007051301,0.00052348705,0.00069751934],"study_design_scores_gemma":[0.0182499,0.025757473,0.38984707,0.00019300448,0.00020966773,0.0057618925,0.0020919426,0.009208098,0.31208047,0.00023624829,0.23244306,0.0039211665],"about_ca_topic_score_codex":0.00013564658,"about_ca_topic_score_gemma":0.0005394736,"teacher_disagreement_score":0.6533943,"about_ca_system_score_codex":0.00003418704,"about_ca_system_score_gemma":0.00013452435,"threshold_uncertainty_score":0.4897583},"labels":[],"label_agreement":null},{"id":"W4221131613","doi":"10.1186/s12870-022-03472-5","title":"The aluminum distribution and translocation in two citrus species differing in aluminum tolerance","year":2022,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Aluminum toxicity and tolerance in plants and animals","field":"Agricultural and Biological Sciences","cited_by":11,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Fujian Agriculture and Forestry University; Dalhousie University; National Natural Science Foundation of China","keywords":"Biology; Chromosomal translocation; Aluminium; Distribution (mathematics); Botany; Genetics; Metallurgy; Gene; Mathematics","score_opus":0.025263076689492146,"score_gpt":0.2306591529249542,"score_spread":0.20539607623546205,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4221131613","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9976526,0.0006975903,0.0000095384385,0.00062559906,0.00015606036,0.0001577751,0.00056856114,0.000015655995,0.0001166533],"genre_scores_gemma":[0.99884236,0.00043107022,0.000006928288,0.00008799995,0.00010269255,0.000055049542,0.0003845383,5.8677983e-7,0.00008877302],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9989883,0.00016517892,0.00023543969,0.00024575816,0.000077175966,0.00028820545],"domain_scores_gemma":[0.99953246,0.00033639214,0.000061170365,0.00003545005,0.0000064302303,0.000028075869],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00037191887,0.0001057859,0.0001685759,0.000011355693,0.00036901943,0.000029835137,0.00017555706,0.000040242725,0.000059290087],"category_scores_gemma":[0.000019593901,0.00004317451,0.000029692219,0.0001808458,0.000100947094,0.000049200567,0.00006122734,0.0001823127,0.0000017714788],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00050113257,0.00018287412,0.69354415,0.00001137266,0.000007783238,0.00002552065,0.00044759098,0.00016678465,0.23836957,0.008974115,0.00019498693,0.057574112],"study_design_scores_gemma":[0.0004397668,0.00017508717,0.9557272,0.000021397527,0.000002334479,0.000056564815,0.0009868416,0.0019045977,0.0014135222,0.0010606518,0.038006734,0.00020530414],"about_ca_topic_score_codex":0.0006627727,"about_ca_topic_score_gemma":0.017594974,"teacher_disagreement_score":0.26218304,"about_ca_system_score_codex":0.000032892094,"about_ca_system_score_gemma":0.000007753086,"threshold_uncertainty_score":0.9818409},"labels":[],"label_agreement":null},{"id":"W4224312697","doi":"10.1186/s12870-022-03598-6","title":"Variations of subtelomeric tandem repeats and rDNA on chromosome 1RS arms in the genus Secale and 1BL.1RS translocations","year":2022,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Chromosomal and Genetic Variations","field":"Agricultural and Biological Sciences","cited_by":10,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Institute of Genetics; National Natural Science Foundation of China; University of Adelaide","keywords":"Secale; Biology; Chromosomal translocation; Subtelomere; Tandem repeat; Genetics; Chromosome; Microsatellite; Heterochromatin; Botany; Gene; Genome","score_opus":0.02744209727384118,"score_gpt":0.21870163203695495,"score_spread":0.19125953476311378,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4224312697","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99680704,0.00028705952,0.000009881636,0.001700788,0.00006906866,0.00021431825,0.0006223838,0.000011872159,0.00027760095],"genre_scores_gemma":[0.99916935,0.000110901994,0.00008208528,0.00019734062,0.000048949598,0.000067361354,0.00029205575,5.844232e-7,0.000031388205],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9991537,0.00022672646,0.00019188026,0.00020927539,0.0000755318,0.0001429157],"domain_scores_gemma":[0.99932295,0.000511103,0.00006868105,0.00005453042,0.000011940444,0.000030800173],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00024045899,0.00008081052,0.00013613203,0.000023454082,0.00025082057,0.000011063926,0.00013726397,0.000052115905,0.00014874694],"category_scores_gemma":[0.000032350596,0.000032037537,0.000028634371,0.00029829465,0.00007347679,0.000018693232,0.000041143285,0.00010955837,0.0000019643594],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015860543,0.001141157,0.422146,0.000035880246,0.000077285826,0.000016626482,0.0096905725,0.00030506123,0.4812057,0.04330463,0.00045220295,0.041466277],"study_design_scores_gemma":[0.00033531373,0.0006363324,0.9810006,0.0000064658398,0.000021199328,0.0001311467,0.0012981467,0.00036822382,0.0002658945,0.0027755478,0.013010849,0.0001502513],"about_ca_topic_score_codex":0.00028081518,"about_ca_topic_score_gemma":0.001612839,"teacher_disagreement_score":0.55885464,"about_ca_system_score_codex":0.00001071613,"about_ca_system_score_gemma":0.000015474876,"threshold_uncertainty_score":0.19291343},"labels":[],"label_agreement":null},{"id":"W4225274949","doi":"10.1186/s12870-022-03611-y","title":"Genome-wide identification, evolutionary and functional analyses of KFB family members in potato","year":2022,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Plant Gene Expression Analysis","field":"Biochemistry, Genetics and Molecular Biology","cited_by":24,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Agriculture and Agri-Food Canada","funders":"Shanxi Agricultural University","keywords":"Biology; Gene; Solanum tuberosum; Transcriptome; Gene family; Genome; Cultivar; Synteny; Genetics; Botany; Gene expression","score_opus":0.02981731650753087,"score_gpt":0.27179925955003614,"score_spread":0.24198194304250528,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4225274949","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99605155,0.0018473734,0.000976927,0.000050690596,0.000097252945,0.000083887564,0.0006485908,0.00000621625,0.00023752986],"genre_scores_gemma":[0.9944694,0.0002521465,0.000368842,0.00015879078,0.000033608616,0.0000398724,0.00420588,0.000006732021,0.00046471955],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9988467,0.00022955907,0.00031689898,0.0003531441,0.00009992469,0.00015375792],"domain_scores_gemma":[0.99951005,0.000060751107,0.00014786521,0.00020085005,0.00003723715,0.000043237116],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002514419,0.00010387328,0.00017928203,0.00020619293,0.0000868639,0.0000036786987,0.00013953217,0.00007567803,0.00012537475],"category_scores_gemma":[0.00009015989,0.00010117573,0.00006602104,0.00018134747,0.00008366052,0.000002845773,0.00020765227,0.00007738429,0.0000026460123],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001476911,0.000043450415,0.14159687,0.0000061472265,0.00005978372,0.00000212439,0.000013027837,0.0019016094,0.85105777,0.00003507262,0.0051179486,0.00001848015],"study_design_scores_gemma":[0.00091115595,0.00018237061,0.8542756,0.000004854983,0.00007164432,0.00011643295,0.0005440742,0.0011108082,0.08329485,0.00020161888,0.05894973,0.0003368612],"about_ca_topic_score_codex":0.000112400776,"about_ca_topic_score_gemma":0.00011075462,"teacher_disagreement_score":0.76776296,"about_ca_system_score_codex":0.000020820095,"about_ca_system_score_gemma":0.00009893023,"threshold_uncertainty_score":0.41258264},"labels":[],"label_agreement":null},{"id":"W4225987495","doi":"10.1186/s12870-022-03433-y","title":"Role of cassava CC-type glutaredoxin MeGRXC3 in regulating sensitivity to mannitol-induced osmotic stress dependent on its nuclear activity","year":2022,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Redox biology and oxidative stress","field":"Biochemistry, Genetics and Molecular Biology","cited_by":20,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Institute of Genetics; Central Public-interest Scientific Institution Basal Research Fund for Chinese Academy of Tropical Agricultural Sciences; Institute of Genetics and Developmental Biology, Chinese Academy of Sciences; Chinese Academy of Tropical Agricultural Sciences; Chinese Academy of Sciences","keywords":"Arabidopsis; Biology; Transactivation; Transcription factor; Cell biology; Abiotic stress; Osmotic shock; Glutaredoxin; Transgene; Seedling; Botany; Gene; Mutant; Genetics","score_opus":0.028752808919251815,"score_gpt":0.2743088935305353,"score_spread":0.24555608461128348,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4225987495","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99802095,0.0000944368,0.000018066841,0.00006061812,0.00026901727,0.00033724954,0.00071265927,0.00001576493,0.00047122905],"genre_scores_gemma":[0.9991469,0.000011927595,0.0001179786,0.00011796823,0.00009088028,0.000020632202,0.00038924636,0.000020737218,0.00008378035],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99757534,0.0009975837,0.00027025546,0.0006301946,0.00011728159,0.00040933996],"domain_scores_gemma":[0.99918884,0.00012735774,0.00017557685,0.00037044857,0.00005419229,0.000083605606],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00046659264,0.00023488836,0.0003581055,0.00014338194,0.0001493502,0.0000055885016,0.00024454604,0.0002554598,0.000028816643],"category_scores_gemma":[0.00023223391,0.0002274859,0.00007768386,0.00016849356,0.000060958835,0.0000044381845,0.00045916636,0.0003041732,0.000011018625],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0015348031,0.00046606947,0.025638416,0.000017453802,0.00004651832,0.000022752569,0.000113512855,0.0006425578,0.9700889,0.00022501471,0.00005130783,0.001152664],"study_design_scores_gemma":[0.0013888987,0.0017232427,0.07409814,0.00002449483,0.000013834435,0.00008813443,0.00046602054,0.0004396076,0.9204392,0.000051097068,0.0009344526,0.00033291348],"about_ca_topic_score_codex":0.00025411838,"about_ca_topic_score_gemma":0.0017395166,"teacher_disagreement_score":0.049649764,"about_ca_system_score_codex":0.000054929977,"about_ca_system_score_gemma":0.0000830036,"threshold_uncertainty_score":0.9276606},"labels":[],"label_agreement":null},{"id":"W4280495231","doi":"10.1186/s12870-022-03641-6","title":"Systematic identification of miRNA-regulatory networks unveils their potential roles in sugarcane response to Sorghum mosaic virus infection","year":2022,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Plant Molecular Biology Research","field":"Agricultural and Biological Sciences","cited_by":14,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ministry of Agriculture","funders":"National Natural Science Foundation of China","keywords":"Biology; Identification (biology); microRNA; Biotechnology; Sorghum; Mosaic; Plant virus; Computational biology; Virology; Virus; Genetics; Botany; Gene; Agronomy","score_opus":0.0155504124112688,"score_gpt":0.23290471870424867,"score_spread":0.21735430629297986,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4280495231","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9974374,0.0003596512,0.00010720351,0.00020981095,0.00021615357,0.00067294325,0.000956991,0.000035405606,0.000004435957],"genre_scores_gemma":[0.99838364,0.000041173378,0.0000074968098,0.00007491109,0.000050745763,0.00018808283,0.0011826956,0.0000016003801,0.000069624926],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99605995,0.002507568,0.0005318876,0.00037820992,0.00015222083,0.00037013553],"domain_scores_gemma":[0.9989402,0.000604253,0.00021902537,0.00012396158,0.00004114719,0.00007138667],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0022540097,0.00014852795,0.00035858687,0.0001172582,0.00017548009,0.000014832592,0.0003769449,0.00015861976,0.00007452784],"category_scores_gemma":[0.000198313,0.000068576475,0.00009262919,0.00048326966,0.00008218595,0.000029841764,0.00025452217,0.00021533619,0.000014059885],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0009772282,0.0000913008,0.025911378,0.000062701365,0.000021880716,0.000009722231,0.000043961332,0.0015104032,0.9709627,0.000056019293,0.000125856,0.00022683851],"study_design_scores_gemma":[0.0006200059,0.0017296892,0.9205846,0.00020711918,0.000034070545,0.00041327847,0.00051003695,0.0065380293,0.067553535,0.00040084866,0.0008632169,0.00054555346],"about_ca_topic_score_codex":0.0006273293,"about_ca_topic_score_gemma":0.004803504,"teacher_disagreement_score":0.9034092,"about_ca_system_score_codex":0.00008199627,"about_ca_system_score_gemma":0.000035503374,"threshold_uncertainty_score":0.27964675},"labels":[],"label_agreement":null},{"id":"W4280527691","doi":"10.1186/s12870-022-03593-x","title":"Variation, coordination, and trade-offs between needle structures and photosynthetic-related traits across five Picea species: consequences on plant growth","year":2022,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Plant Water Relations and Carbon Dynamics","field":"Environmental Science","cited_by":18,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Victoria","funders":"","keywords":"Biology; Variation (astronomy); Photosynthesis; Plant growth; Ecology; Botany","score_opus":0.012546844771021927,"score_gpt":0.21156592051889522,"score_spread":0.1990190757478733,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4280527691","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9934256,0.000042751268,0.000058214046,0.00040480905,0.00010840178,0.00022502309,0.0050155125,0.000036076177,0.00068359845],"genre_scores_gemma":[0.9986597,0.000037950103,0.00012108261,0.00014731287,0.000018852726,0.000020021243,0.0007302991,0.0000075912517,0.00025720205],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99881643,0.00017889646,0.0002464678,0.00036669677,0.000134258,0.000257226],"domain_scores_gemma":[0.99941105,0.00030388572,0.00012474372,0.00008268161,0.0000036467413,0.00007402254],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00022699354,0.00016008296,0.00020520743,0.000045523357,0.00043651075,0.000032674656,0.00015750522,0.000108192464,0.00027799536],"category_scores_gemma":[0.000032656546,0.00013332377,0.00002428385,0.00013831307,0.00035248132,0.000066100205,0.00013364234,0.00019387287,0.000005875834],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00027822846,0.0001347909,0.86209095,0.00003387425,0.00018415043,0.000054339154,0.014550159,0.004495414,0.06815163,0.04728713,0.0013901439,0.0013492162],"study_design_scores_gemma":[0.0010114877,0.00043632276,0.96669245,0.000009718618,0.000049482416,0.0005316723,0.0007754037,0.0060247416,0.00091581594,0.01811558,0.0049939295,0.0004433882],"about_ca_topic_score_codex":0.00043901184,"about_ca_topic_score_gemma":0.0001957214,"teacher_disagreement_score":0.10460153,"about_ca_system_score_codex":0.0000669917,"about_ca_system_score_gemma":0.00001291786,"threshold_uncertainty_score":0.5436786},"labels":[],"label_agreement":null},{"id":"W4281388397","doi":"10.1186/s12870-022-03644-3","title":"Enhanced anti-herbivore defense of tomato plants against Spodoptera litura by their rhizosphere bacteria","year":2022,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Plant-Microbe Interactions and Immunity","field":"Agricultural and Biological Sciences","cited_by":17,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Institute of Genetics and Developmental Biology, Chinese Academy of Sciences; Agricultural Research Service; Natural Science Foundation of Fujian Province; Chinese Academy of Sciences; Institute of Genetics; National Natural Science Foundation of China; U.S. Department of Agriculture","keywords":"Biology; Rhizosphere; Spodoptera litura; Bacteria; Botany; Bacillus thuringiensis; Horticulture; Lepidoptera genitalia","score_opus":0.017641902831935025,"score_gpt":0.20838759681764024,"score_spread":0.1907456939857052,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4281388397","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98508537,0.00025549578,0.000004416748,0.00007934329,0.0004317375,0.00016902691,0.012993818,0.000061410596,0.0009193869],"genre_scores_gemma":[0.99377996,0.00014716113,0.000055622237,0.00024751513,0.00006144806,0.000024684996,0.0054759295,0.0000016820892,0.00020598799],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9986618,0.00027733546,0.00034303017,0.00030435144,0.000072468705,0.00034097844],"domain_scores_gemma":[0.99923825,0.0003427959,0.00021997368,0.00010678576,0.000029211122,0.000062970874],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00017094443,0.00020049346,0.00034817195,0.000016073162,0.00030916935,0.000022944485,0.0004310699,0.00010993607,0.0013626394],"category_scores_gemma":[0.000019550449,0.00008421291,0.0001163155,0.00014238803,0.00006720982,0.00006997302,0.00021722897,0.00024218921,0.00002305779],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00021002353,0.00015723692,0.003861866,0.000007491215,0.000028333792,0.00000405165,0.000084345476,0.0000054681427,0.9891023,0.000043005137,0.0029810288,0.003514845],"study_design_scores_gemma":[0.000797724,0.0012323642,0.094258815,0.00009063173,0.000020433805,0.00049961644,0.0034164037,0.00018195513,0.62713593,0.00014969923,0.2713265,0.0008899175],"about_ca_topic_score_codex":0.00046903556,"about_ca_topic_score_gemma":0.0005113323,"teacher_disagreement_score":0.3619664,"about_ca_system_score_codex":0.00002990787,"about_ca_system_score_gemma":0.000016715538,"threshold_uncertainty_score":0.9995502},"labels":[],"label_agreement":null},{"id":"W4282042246","doi":"10.1186/s12870-022-03626-5","title":"Comprehensive analysis of the MYB transcription factor gene family in Morus alba","year":2022,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Plant Gene Expression Analysis","field":"Biochemistry, Genetics and Molecular Biology","cited_by":25,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ministry of Agriculture","funders":"Ministry of Agriculture and Rural Affairs of the People's Republic of China; Natural Science Foundation of Jiangsu Province; Government of Jiangsu Province","keywords":"Biology; MYB; Genetics; Gene; Transcription factor; Intron; Structural motif; Exon; WRKY protein domain; Synteny; Genome; Transcriptome; Computational biology; Gene expression; Biochemistry","score_opus":0.02803663141334747,"score_gpt":0.2541175073385542,"score_spread":0.22608087592520673,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4282042246","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99576837,0.000566156,0.00043344824,0.000043516975,0.0001716325,0.00013276517,0.0027511443,0.000005843551,0.00012712015],"genre_scores_gemma":[0.9968005,0.0001532928,0.00014532686,0.00034488994,0.000024310528,0.00003112845,0.0022805557,0.0000074773843,0.0002125322],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99855196,0.00045417174,0.00031110056,0.0003554586,0.00011959114,0.00020772309],"domain_scores_gemma":[0.99936414,0.00003950665,0.00015600269,0.00037453993,0.000030867515,0.00003497016],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00011241492,0.00013670554,0.00032631904,0.00024490146,0.00008214905,0.0000034842283,0.00038377265,0.00011125941,0.00008710309],"category_scores_gemma":[0.000021315334,0.000103717495,0.0002828243,0.0005588441,0.000071795555,0.0000014944098,0.00019776149,0.00012406985,0.0000016407448],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014654426,0.00005816235,0.047886033,0.0000038055607,0.00036045883,0.0000018736645,0.000052636155,0.0056242286,0.9446876,0.000022239681,0.0010768397,0.000079577054],"study_design_scores_gemma":[0.001088092,0.00025612366,0.2694773,0.0000047695185,0.0005334017,0.000027717982,0.0004974445,0.0048706285,0.6442781,0.000034112283,0.07853777,0.00039449718],"about_ca_topic_score_codex":0.00028530764,"about_ca_topic_score_gemma":0.0004794903,"teacher_disagreement_score":0.30040947,"about_ca_system_score_codex":0.000022586688,"about_ca_system_score_gemma":0.000065096065,"threshold_uncertainty_score":0.42294767},"labels":[],"label_agreement":null},{"id":"W4283593458","doi":"10.1186/s12870-022-03683-w","title":"Polyphosphate application influences morpho-physiological root traits involved in P acquisition and durum wheat growth performance","year":2022,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Plant nutrient uptake and metabolism","field":"Agricultural and Biological Sciences","cited_by":32,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"University of Toronto; Université Mohammed VI Polytechnique","keywords":"Biology; Shoot; Chlorophyll; Rhizosphere; Photosynthesis; Nutrient; Biomass (ecology); Agronomy; Crop; Horticulture; Botany","score_opus":0.02028455481233643,"score_gpt":0.20552993338601416,"score_spread":0.18524537857367773,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4283593458","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99770385,0.0010924633,0.0000032455496,0.00030249465,0.000100540456,0.00026863767,0.0004180657,0.00005157628,0.00005913104],"genre_scores_gemma":[0.99746054,0.00079231296,0.000034818364,0.0004224744,0.000101451405,0.00014633941,0.0010129656,7.79336e-7,0.000028285873],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99875575,0.00017071467,0.0002424076,0.0003947362,0.00010176858,0.00033461535],"domain_scores_gemma":[0.99965674,0.00012404959,0.00009826826,0.00003594941,0.00001610494,0.0000688773],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00026817207,0.0001484675,0.00023668438,0.000033286033,0.0002580486,0.00001480962,0.00022255041,0.00010508316,0.00008379777],"category_scores_gemma":[0.000014269514,0.000064753716,0.000037109476,0.00028251897,0.000077616554,0.00010417625,0.0001354038,0.00016837762,0.000011376557],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00022096586,0.00008784547,0.3179585,0.0000058663923,0.000004012772,0.000003040366,0.000039342834,0.000012762369,0.67224747,0.0021431888,0.00013367375,0.0071433233],"study_design_scores_gemma":[0.00030960853,0.00034758248,0.9830431,0.0000059292074,0.0000057442344,0.000031556596,0.00010739976,0.0003164258,0.0031921822,0.0008095689,0.011653666,0.0001772729],"about_ca_topic_score_codex":0.0002508366,"about_ca_topic_score_gemma":0.00044523482,"teacher_disagreement_score":0.6690553,"about_ca_system_score_codex":0.000019122072,"about_ca_system_score_gemma":0.000009682267,"threshold_uncertainty_score":0.264058},"labels":[],"label_agreement":null},{"id":"W4286561307","doi":"10.1186/s12870-022-03749-9","title":"Functional characterization and analysis of transcriptional regulation of sugar transporter SWEET13c in sugarcane Saccharum spontaneum","year":2022,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Sugarcane Cultivation and Processing","field":"Agricultural and Biological Sciences","cited_by":18,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ministry of Agriculture","funders":"National Key Research and Development Program of China; Science and Technology Major Project of Guangxi; Fujian Agriculture and Forestry University; Guangxi University; Department of Education, Fujian Province; National Natural Science Foundation of China","keywords":"Biology; Saccharum; Sugar; Botany; Biotechnology; Biochemistry","score_opus":0.03497140397484093,"score_gpt":0.2100437323890828,"score_spread":0.17507232841424186,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4286561307","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9981715,0.00005814545,0.0001949308,0.00024514462,0.00005842777,0.000076941746,0.001164679,0.000008173031,0.000022053466],"genre_scores_gemma":[0.9901346,0.00001383624,0.00003464123,0.00006391214,0.00002150905,0.000010900617,0.009655539,4.931824e-7,0.000064572756],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99922836,0.00011083933,0.00028841596,0.00017251381,0.000104261315,0.00009561254],"domain_scores_gemma":[0.9996768,0.00010858874,0.00013997928,0.000022025686,0.000031725074,0.000020876272],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00021989681,0.00006654251,0.00020060052,0.000099733756,0.0000654228,0.0000031186594,0.000057121117,0.0000491858,0.0017140731],"category_scores_gemma":[0.00000864908,0.00003445727,0.000056236317,0.00056164624,0.000043564323,0.00004832019,0.000010531761,0.000057155394,2.2132717e-7],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00018571278,0.00003557575,0.33469564,0.000005817068,0.000020642301,2.92932e-7,0.00008822838,0.000059155314,0.6611352,0.00074933266,0.0000019151248,0.0030225057],"study_design_scores_gemma":[0.00017285469,0.00009137813,0.99458814,0.0000037907892,0.000040108946,0.000007540882,0.00011192261,0.0009716635,0.0028723055,0.0000928959,0.000981572,0.00006580087],"about_ca_topic_score_codex":0.00010555601,"about_ca_topic_score_gemma":0.0009494715,"teacher_disagreement_score":0.6598925,"about_ca_system_score_codex":0.00001408657,"about_ca_system_score_gemma":0.000014328384,"threshold_uncertainty_score":0.9991985},"labels":[],"label_agreement":null},{"id":"W4292169150","doi":"10.1186/s12870-022-03747-x","title":"Glucoraphanin and sulforaphane biosynthesis by melatonin mediating nitric oxide in hairy roots of broccoli (Brassica oleracea L. var. italica Planch): insights from transcriptome data","year":2022,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Genomics, phytochemicals, and oxidative stress","field":"Biochemistry, Genetics and Molecular Biology","cited_by":19,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Gansu Agricultural University; National Natural Science Foundation of China; CMG Reservoir Simulation Foundation","keywords":"Glucoraphanin; Biology; Brassica oleracea; Sulforaphane; Transcriptome; Brassica; Hypocotyl; Botany; KEGG; Biosynthesis; Brassicaceae; Biochemistry; Glucosinolate; Gene; Gene expression","score_opus":0.016954064233943383,"score_gpt":0.23198432068005087,"score_spread":0.2150302564461075,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4292169150","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97856444,0.008507898,0.00027697644,0.000048761787,0.00012569097,0.00026733693,0.012132777,0.000014558738,0.000061582185],"genre_scores_gemma":[0.98464,0.0005818148,0.00087924604,0.00014733413,0.000096097756,0.000039528637,0.013569686,0.000027101923,0.000019190273],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99780154,0.00032022144,0.0005277182,0.000848407,0.00012614536,0.0003759483],"domain_scores_gemma":[0.9987976,0.0002280096,0.00026747616,0.00056800374,0.000026419197,0.000112478185],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0002084696,0.00028443054,0.00049869344,0.000173262,0.00010555693,0.000011753778,0.0006936907,0.00024053236,0.000029538136],"category_scores_gemma":[0.00014192532,0.00028009163,0.000067243025,0.00020596849,0.00019100764,0.000011957282,0.0005408385,0.00022479522,0.0000014987969],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0004022595,0.00015100474,0.03712123,0.000026285847,0.0000940625,0.0000067748356,0.000078136014,0.000009847906,0.9604948,0.000040815452,0.001263193,0.00031159192],"study_design_scores_gemma":[0.0016313726,0.00022845395,0.019416539,0.000020530382,0.000048267342,0.000025792373,0.0004495631,0.00026529882,0.9656553,0.00032245507,0.011470861,0.00046555305],"about_ca_topic_score_codex":0.00045126438,"about_ca_topic_score_gemma":0.00042214966,"teacher_disagreement_score":0.017704688,"about_ca_system_score_codex":0.000021915534,"about_ca_system_score_gemma":0.00009611012,"threshold_uncertainty_score":0.99996513},"labels":[],"label_agreement":null},{"id":"W4295900629","doi":"10.1186/s12870-022-03815-2","title":"Xylem structure and hydraulic characteristics of deep roots, shallow roots and branches of walnut under seasonal drought","year":2022,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Plant responses to water stress","field":"Agricultural and Biological Sciences","cited_by":16,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"University of Alberta","keywords":"Biology; Xylem; Botany; Plant roots; Agronomy","score_opus":0.014598915646017471,"score_gpt":0.20248600646757547,"score_spread":0.187887090821558,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4295900629","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9941992,0.00061430305,0.0000056414297,0.00019601399,0.00008377479,0.00011357386,0.0047434927,0.00001493937,0.000029064227],"genre_scores_gemma":[0.99863285,0.000078879355,0.000077227734,0.00008862285,0.000059497088,0.000005894702,0.0010017595,0.000001034021,0.00005425098],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99895066,0.00020615543,0.00023173106,0.00027847497,0.00010682342,0.0002261732],"domain_scores_gemma":[0.99929315,0.0004069028,0.00016507828,0.00005027933,0.000019327354,0.000065244225],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00011785568,0.0001448027,0.0003238166,0.000021385911,0.00010818556,0.000010293717,0.00019690645,0.00010597448,0.0001775454],"category_scores_gemma":[0.000027307486,0.000062471496,0.000038659226,0.000098585326,0.00014347346,0.000033681623,0.00024650103,0.00012808168,4.7625224e-7],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00047128188,0.00004497233,0.43749943,0.000040562732,0.00003413839,0.000009958687,0.00006581512,0.0000054610146,0.5397028,0.00058517756,0.00003723823,0.021503154],"study_design_scores_gemma":[0.00019826024,0.00031206198,0.9893812,0.000009311563,0.000016839058,0.0002396838,0.00007668767,0.00021733931,0.004799382,0.0005610203,0.00404421,0.00014403387],"about_ca_topic_score_codex":0.00016941827,"about_ca_topic_score_gemma":0.0020533975,"teacher_disagreement_score":0.55188173,"about_ca_system_score_codex":0.000010519456,"about_ca_system_score_gemma":0.000012040227,"threshold_uncertainty_score":0.25475138},"labels":[],"label_agreement":null},{"id":"W4296082453","doi":"10.1186/s12870-022-03814-3","title":"Comparing complete organelle genomes of holoparasitic Christisonia kwangtungensis (Orabanchaceae) with its close relatives: how different are they?","year":2022,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Plant Parasitism and Resistance","field":"Agricultural and Biological Sciences","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Biology; Plastid; Genome; Orobanchaceae; Nuclear gene; Gene; Gene family; Orobanche; Genetics; Organelle; Plant evolution; Evolutionary biology; Chloroplast; Botany","score_opus":0.042075667601948315,"score_gpt":0.21288604465408675,"score_spread":0.17081037705213845,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4296082453","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9929594,0.002445057,0.0000111139,0.0003491317,0.00011245057,0.0002636652,0.0035578813,0.000057431727,0.00024389177],"genre_scores_gemma":[0.9985478,0.00020418897,0.00006430182,0.000054524884,0.000070379654,0.000029254517,0.00075094274,0.000002301278,0.0002763127],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9984611,0.0003242316,0.00022477428,0.00042986815,0.00016659264,0.00039337683],"domain_scores_gemma":[0.9990611,0.00041730583,0.00030669462,0.00009229086,0.000036653524,0.00008596808],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013273816,0.00022868138,0.0005309542,0.0000286276,0.00041377885,0.000017154754,0.00035975254,0.000074908996,0.00015957355],"category_scores_gemma":[0.000017792718,0.000088702036,0.000075166114,0.00017450488,0.00012305535,0.00003968106,0.00016236404,0.00021188486,0.0000127727],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00038404984,0.00014891027,0.48188445,0.00004062588,0.000073231706,0.00006582902,0.00019979913,0.000050593135,0.51531863,0.0011451574,0.0005000313,0.00018870608],"study_design_scores_gemma":[0.0004108765,0.0006024587,0.988953,0.00004306993,0.00003785617,0.00020962032,0.0008462541,0.00016881741,0.0022856242,0.00013012812,0.005976723,0.0003355502],"about_ca_topic_score_codex":0.000089341775,"about_ca_topic_score_gemma":0.0020034043,"teacher_disagreement_score":0.513033,"about_ca_system_score_codex":0.000037158225,"about_ca_system_score_gemma":0.000014189215,"threshold_uncertainty_score":0.3617164},"labels":[],"label_agreement":null},{"id":"W4302773406","doi":"10.1186/s12870-022-03857-6","title":"Transcriptomic analysis provides insight into defensive strategies in response to continuous cropping in strawberry (Fragaria × ananassa Duch.) plants","year":2022,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Plant Gene Expression Analysis","field":"Biochemistry, Genetics and Molecular Biology","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ministry of Agriculture","funders":"Shandong Academy of Agricultural Sciences; Natural Science Foundation of Shandong Province","keywords":"WRKY protein domain; Biology; KEGG; Transcriptome; Fragaria; Phenylpropanoid; Gene; Botany; Gene expression; Genetics; Biosynthesis","score_opus":0.012883620755693884,"score_gpt":0.2602208322832019,"score_spread":0.24733721152750804,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4302773406","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99351466,0.00039609737,0.0004915898,0.00015321246,0.00012257177,0.0003535232,0.004825101,0.000018907103,0.00012434566],"genre_scores_gemma":[0.988789,0.000057991725,0.0004294026,0.00049867464,0.00003326808,0.00014131093,0.009937612,0.000016401229,0.00009632066],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9965027,0.0013103273,0.0006164361,0.0008720265,0.00015987526,0.0005386451],"domain_scores_gemma":[0.9990545,0.00015184299,0.00016804597,0.00045611354,0.000039119543,0.00013037337],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00080879393,0.00030855552,0.0006400915,0.0012121306,0.0001372908,0.00003859775,0.00050447707,0.00023316898,0.00008244262],"category_scores_gemma":[0.00020470476,0.00030104304,0.00019908218,0.0008786723,0.00007570129,0.000009735841,0.00026451424,0.0002910776,0.000009957637],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0039952504,0.00013866398,0.031583056,0.000010276956,0.00025721474,0.00015125508,0.00072132464,0.008037293,0.95187134,0.000030887433,0.003104332,0.00009909687],"study_design_scores_gemma":[0.012316942,0.006230824,0.30510214,0.00017256603,0.0010516656,0.000687959,0.030408982,0.006099614,0.2775934,0.00075372896,0.35428908,0.005293092],"about_ca_topic_score_codex":0.001840689,"about_ca_topic_score_gemma":0.046036694,"teacher_disagreement_score":0.67427796,"about_ca_system_score_codex":0.00010511935,"about_ca_system_score_gemma":0.000386853,"threshold_uncertainty_score":0.99994415},"labels":[],"label_agreement":null},{"id":"W4307066817","doi":"10.1186/s12870-022-03870-9","title":"Genome-scale analysis of Arabidopsis splicing-related protein kinase families reveals roles in abiotic stress adaptation","year":2022,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"RNA Research and Splicing","field":"Biochemistry, Genetics and Molecular Biology","cited_by":20,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Biology; Arabidopsis; Abiotic stress; Adaptation (eye); RNA splicing; Genome; Computational biology; Genetics; Alternative splicing; Scale (ratio); Evolutionary biology; Abiotic component; Gene; Ecology; Neuroscience; Exon; Mutant","score_opus":0.014149362666394322,"score_gpt":0.24767389767553422,"score_spread":0.2335245350091399,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4307066817","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9979485,0.0006586706,0.00026987935,0.000033910277,0.00002442621,0.00031779226,0.0006440464,0.000008098535,0.00009462263],"genre_scores_gemma":[0.9966761,0.0001005251,0.00026797815,0.000025592919,0.000017541657,0.00007640477,0.0024324257,0.000010177467,0.00039324025],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.998469,0.00035650402,0.00037602556,0.00037516566,0.00011593285,0.00030738258],"domain_scores_gemma":[0.9994345,0.00003970253,0.00015269962,0.00027860657,0.000039476738,0.000055057833],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00042815984,0.00013057991,0.0003263498,0.00042027363,0.00008193848,0.000005945548,0.00023714198,0.000116850686,0.000049531212],"category_scores_gemma":[0.00008248916,0.00012321239,0.00012437816,0.0005709509,0.00008057942,0.000002782461,0.00017298818,0.0001417836,0.0000018281529],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000224186,0.00008772955,0.105621256,0.000023988041,0.00017769187,0.0000050902204,0.00016118672,0.010281124,0.8829302,0.00006490828,0.000006755695,0.0004158781],"study_design_scores_gemma":[0.0027701613,0.0023976448,0.5745639,0.00006316434,0.0004009403,0.000026921245,0.0056445585,0.038472954,0.37343344,0.00027393058,0.0010437734,0.000908608],"about_ca_topic_score_codex":0.0006883748,"about_ca_topic_score_gemma":0.003724606,"teacher_disagreement_score":0.50949675,"about_ca_system_score_codex":0.000034312525,"about_ca_system_score_gemma":0.00007602161,"threshold_uncertainty_score":0.5024456},"labels":[],"label_agreement":null},{"id":"W4307380516","doi":"10.1186/s12870-022-03880-7","title":"Niche differentiation modulates metabolites abundance and composition in silicon fertilizer amended soil during sugarcane growth","year":2022,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Silicon Effects in Agriculture","field":"Agricultural and Biological Sciences","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ministry of Agriculture","funders":"","keywords":"Biology; Niche; Fertilizer; Abundance (ecology); Agronomy; Botany; Biotechnology; Ecology","score_opus":0.011748177428048094,"score_gpt":0.198918268592769,"score_spread":0.18717009116472091,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4307380516","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99835676,0.0006887892,8.08565e-7,0.00026252135,0.00014077268,0.00024774528,0.00020220097,0.000065222084,0.000035205398],"genre_scores_gemma":[0.998769,0.000074615484,0.000020486545,0.000102706144,0.00007861528,0.000087236316,0.00083408697,0.0000011038484,0.00003216015],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9986459,0.00038205856,0.00020991015,0.00038379518,0.000096240685,0.00028207278],"domain_scores_gemma":[0.9994724,0.0003191527,0.0000982868,0.000043686334,0.000018306393,0.00004821479],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00016416702,0.00015846077,0.00024329651,0.000029679271,0.00023553656,0.000025651738,0.00016617999,0.00009220346,0.00013547858],"category_scores_gemma":[0.000031891,0.000066148365,0.00004584553,0.00022363034,0.000054168497,0.000063409745,0.00015827619,0.00018839946,0.0000030373412],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000112285874,0.000058763933,0.2839317,0.000009998708,0.0000071660047,0.0000019965912,0.00005191272,0.000028456958,0.71497625,0.00045231395,0.000011811706,0.00035735528],"study_design_scores_gemma":[0.0003373235,0.0001405516,0.89527565,0.0000071764966,0.000008976684,0.000043721484,0.00008897649,0.00048519185,0.10264862,0.00073101436,0.000070157526,0.00016266693],"about_ca_topic_score_codex":0.00041164074,"about_ca_topic_score_gemma":0.0013191663,"teacher_disagreement_score":0.61232764,"about_ca_system_score_codex":0.000047747446,"about_ca_system_score_gemma":0.000003831184,"threshold_uncertainty_score":0.2697452},"labels":[],"label_agreement":null},{"id":"W4311500439","doi":"10.1186/s12870-022-03962-6","title":"Plasma membrane aquaporins of the PIP1 and PIP2 subfamilies facilitate hydrogen peroxide diffusion into plant roots","year":2022,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Ion Transport and Channel Regulation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":34,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"Biotieteiden ja Ympäristön Tutkimuksen Toimikunta; Suomen Kulttuurirahasto; Helsingin Yliopisto","keywords":"Aquaporin; Biology; Hydrogen peroxide; Arabidopsis thaliana; Biophysics; Membrane; Cell biology; Biochemistry; Reactive oxygen species; Membrane permeability; Mutant; Botany; Gene","score_opus":0.01324430677890648,"score_gpt":0.2009628804345589,"score_spread":0.18771857365565242,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4311500439","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.998194,0.0004461652,0.00008165707,0.00008245441,0.00022782137,0.00018082236,0.0006896106,0.000010146117,0.000087356835],"genre_scores_gemma":[0.9974625,0.0001782359,0.00005085235,0.00004577583,0.000054947435,0.000027866807,0.001609865,0.000009751074,0.00056019094],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99906266,0.00012338138,0.00023350307,0.00029192521,0.00009950443,0.00018900845],"domain_scores_gemma":[0.9995925,0.00002648762,0.00010360728,0.00021864305,0.000017892327,0.000040899162],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00016596541,0.00014201511,0.00017614414,0.00004365228,0.00019366544,0.0000029839644,0.00018927449,0.00011010518,0.00002487671],"category_scores_gemma":[0.000015886058,0.00010303093,0.000080992184,0.000060699826,0.0001398002,0.0000023779733,0.00017240454,0.00009063689,0.0000012388277],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00033766357,0.000041512958,0.040225897,0.000035915073,0.000026565293,0.0000017869771,0.00031329427,0.00021094068,0.9582569,0.00022682012,0.00009618087,0.00022650338],"study_design_scores_gemma":[0.0011917879,0.0005440558,0.040444713,0.000012088825,0.000037890575,0.00013284727,0.0008142398,0.0005843816,0.908941,0.00027156726,0.04673636,0.00028910243],"about_ca_topic_score_codex":0.00014466594,"about_ca_topic_score_gemma":0.00078616623,"teacher_disagreement_score":0.049315955,"about_ca_system_score_codex":0.000014207166,"about_ca_system_score_gemma":0.000067095265,"threshold_uncertainty_score":0.42014793},"labels":[],"label_agreement":null},{"id":"W4311511275","doi":"10.1186/s12870-022-03981-3","title":"A reappraisal of the phylogeny and historical biogeography of Sparganium (Typhaceae) using complete chloroplast genomes","year":2022,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Genomics and Phylogenetic Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Trent University","funders":"China Scholarship Council","keywords":"Biology; Biogeography; Phylogenetics; Genome; Chloroplast; Evolutionary biology; Ecology; Genetics; Gene","score_opus":0.03263369494910376,"score_gpt":0.22699809789724135,"score_spread":0.1943644029481376,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4311511275","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99178374,0.0066612773,0.00007888856,0.00002995416,0.00036236964,0.00013342891,0.00085228164,0.0000015447575,0.00009651741],"genre_scores_gemma":[0.99886423,0.00025584098,0.00066959945,0.000046460198,0.000072596544,0.000008802935,0.000053131258,0.00001014753,0.000019177713],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.99914205,0.0001261655,0.00023774299,0.00025340496,0.00006300973,0.00017762647],"domain_scores_gemma":[0.99947226,0.000040948908,0.0001891475,0.00023505765,0.000033248525,0.000029319208],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014330918,0.0001233091,0.00024291498,0.000053076667,0.00014154107,0.0000017451194,0.00021512575,0.000066562054,0.00000897557],"category_scores_gemma":[0.000021767402,0.00009519123,0.00010683038,0.00010730174,0.00020653503,2.6177293e-7,0.0005296539,0.00006590128,1.0897615e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010064041,0.000037164118,0.22536737,0.000014032964,0.00007109564,2.977662e-7,0.00004549982,0.000045081113,0.7738023,0.00032692804,0.0001317769,0.00005782886],"study_design_scores_gemma":[0.002124253,0.002231286,0.36262307,0.000012332771,0.00021313503,0.0004350014,0.0005218155,0.0002555795,0.24939351,0.00037977804,0.38110432,0.00070594804],"about_ca_topic_score_codex":0.00017696613,"about_ca_topic_score_gemma":0.00006810564,"teacher_disagreement_score":0.52440876,"about_ca_system_score_codex":0.00001068332,"about_ca_system_score_gemma":0.00005982814,"threshold_uncertainty_score":0.3881786},"labels":[],"label_agreement":null},{"id":"W4312179047","doi":"10.1186/s12870-022-03998-8","title":"Plant gene silencing signals move from the phloem to influence gene expression in shoot apical meristems","year":2022,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Plant Molecular Biology Research","field":"Agricultural and Biological Sciences","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Biology; Phloem; Gene silencing; Meristem; Cell biology; Gene expression; Transgene; Gene; Regulation of gene expression; Genetics; Botany","score_opus":0.039631621178187026,"score_gpt":0.25473087096892993,"score_spread":0.2150992497907429,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4312179047","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9934641,0.00057137467,0.000035298668,0.0007346597,0.00016624476,0.0004286479,0.0045290133,0.000040852334,0.000029801831],"genre_scores_gemma":[0.9957257,0.000049464947,0.0002709263,0.0013444,0.00019103456,0.0001860733,0.002199166,0.0000018531719,0.000031380132],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9970415,0.0010969255,0.00035780077,0.00064691773,0.0002426403,0.0006142164],"domain_scores_gemma":[0.9981158,0.0014783738,0.00009893518,0.00014572976,0.000022752183,0.00013841309],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007006188,0.00020503574,0.00032187943,0.000033807344,0.0003647834,0.00002854393,0.0009776579,0.00016773483,0.00027963248],"category_scores_gemma":[0.00019980477,0.00007584176,0.00007556541,0.00033682305,0.00009451207,0.000032145465,0.0008213418,0.00043721581,0.000057701913],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00026825277,0.000049444654,0.09937708,0.000001008864,0.000009093545,0.00006680548,0.000107883396,0.0002469194,0.89860374,0.000020062202,0.0006437625,0.00060598145],"study_design_scores_gemma":[0.00041078473,0.000794147,0.4305187,0.000033218665,0.000009400229,0.00025696855,0.0006807868,0.00038143637,0.55444,0.00043074612,0.011515628,0.00052819744],"about_ca_topic_score_codex":0.0022051395,"about_ca_topic_score_gemma":0.0021561335,"teacher_disagreement_score":0.34416372,"about_ca_system_score_codex":0.000063916734,"about_ca_system_score_gemma":0.000039084687,"threshold_uncertainty_score":0.3333526},"labels":[],"label_agreement":null},{"id":"W4313380494","doi":"10.1186/s12870-022-04003-y","title":"Determinants of substrate specificity in a catalytically diverse family of acyl-ACP thioesterases from plants","year":2023,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Lipid metabolism and biosynthesis","field":"Biochemistry, Genetics and Molecular Biology","cited_by":38,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Carleton University","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Thioesterase; Biology; Biochemistry; Acyl carrier protein; Fatty acid synthesis; Peptide sequence; Enzyme; Sequence motif; Arabidopsis; Biosynthesis; Gene","score_opus":0.039059386989110136,"score_gpt":0.26755566854264096,"score_spread":0.22849628155353083,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4313380494","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9969924,0.00019367423,0.000011068586,0.0000034446712,0.0002210764,0.00011300559,0.002347841,0.000010759823,0.00010672124],"genre_scores_gemma":[0.9983333,0.00041205392,0.00021245665,0.000032369004,0.00011917926,0.000005589117,0.00083851727,0.000009178622,0.000037367572],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9988041,0.00009809117,0.0004091682,0.00033794937,0.0000801491,0.00027057793],"domain_scores_gemma":[0.9993535,0.00011967769,0.00015563935,0.00029134625,0.000027251448,0.00005255192],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00020550174,0.00015519041,0.00037721088,0.000103944236,0.000028406153,0.0000034009029,0.00029900568,0.00022912581,0.000010892118],"category_scores_gemma":[0.00010967084,0.00012428498,0.00007626748,0.00010331703,0.00014641882,0.0000038244084,0.0003089244,0.000055048637,0.000019621632],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00028587578,0.00005621809,0.38432467,0.000021115606,0.00001543446,0.000009702774,0.000056129145,0.000001787809,0.61444503,0.000011127733,0.000078108285,0.0006947855],"study_design_scores_gemma":[0.00033967604,0.000067325884,0.4321747,0.000024466945,0.00000967451,0.000003298351,0.00012727802,0.000019984474,0.5664867,0.000030280125,0.00061382115,0.000102737235],"about_ca_topic_score_codex":0.0005604119,"about_ca_topic_score_gemma":0.0020685806,"teacher_disagreement_score":0.04795832,"about_ca_system_score_codex":0.0000035966198,"about_ca_system_score_gemma":0.00008094879,"threshold_uncertainty_score":0.5068194},"labels":[],"label_agreement":null},{"id":"W4313545819","doi":"10.1186/s12870-022-04024-7","title":"Physiological and transcriptomic analyses provide insight into thermotolerance in desert plant Zygophyllum xanthoxylum","year":2023,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Plant biochemistry and biosynthesis","field":"Biochemistry, Genetics and Molecular Biology","cited_by":12,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Carleton University","funders":"National Natural Science Foundation of China","keywords":"Biology; Transcriptome; Heat shock protein; Photosynthesis; Acclimatization; Botany; Gene; Cell biology; Gene expression; Biochemistry","score_opus":0.05018551613895484,"score_gpt":0.29108357561329246,"score_spread":0.24089805947433762,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4313545819","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9977659,0.0009440982,0.00005164081,0.00013539699,0.00010840592,0.00021505536,0.0005031652,0.00005477541,0.0002215598],"genre_scores_gemma":[0.9961935,0.0011552137,0.00024539497,0.00023154999,0.00016543132,0.000053260304,0.0018031747,0.000015247002,0.00013720761],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9982336,0.00019410707,0.00032239137,0.0007056551,0.000072931616,0.00047129815],"domain_scores_gemma":[0.99943846,0.00008683474,0.00008303875,0.00027259183,0.000018561863,0.000100498284],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002355675,0.0002925813,0.0003789433,0.000110457375,0.00009171055,0.000017914961,0.00029764674,0.0004363891,0.000012831766],"category_scores_gemma":[0.00012566039,0.0002195496,0.00009912567,0.00021553652,0.00022474614,0.0000059902,0.0001244944,0.00015818258,0.000020593308],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00045598354,0.000059162514,0.014144049,0.00006456409,0.00004311158,0.00003596862,0.00006578798,0.000012509368,0.98408043,0.00003292316,0.0005459668,0.0004595377],"study_design_scores_gemma":[0.000710755,0.00028123707,0.04837424,0.000053171854,0.00002223477,0.00010960545,0.00008739608,0.0006461886,0.9388543,0.00018490334,0.010219738,0.00045628074],"about_ca_topic_score_codex":0.00009220799,"about_ca_topic_score_gemma":0.0005090365,"teacher_disagreement_score":0.045226187,"about_ca_system_score_codex":0.000012669525,"about_ca_system_score_gemma":0.00007193435,"threshold_uncertainty_score":0.8952973},"labels":[],"label_agreement":null},{"id":"W4315628608","doi":"10.1186/s12870-023-04035-y","title":"Systematic characterization of Brassica napus UBC13 genes involved in DNA-damage response and K63-linked polyubiquitination","year":2023,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Ubiquitin and proteasome pathways","field":"Biochemistry, Genetics and Molecular Biology","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Agriculture and Agri-Food Canada; University of Saskatchewan","funders":"Saskatchewan Canola Development Commission; Ministry of Agriculture - Saskatchewan","keywords":"Biology; Ubiquitin; Ubiquitin-conjugating enzyme; Brassica; Gene; Mutagenesis; Biochemistry; Mutant; Genetics; Ubiquitin ligase; Botany","score_opus":0.02206417367540669,"score_gpt":0.25092373217314234,"score_spread":0.22885955849773565,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4315628608","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9986255,0.0002177265,0.00016283142,0.00009731346,0.0001136049,0.00045533205,0.0002710176,0.000027424052,0.000029214498],"genre_scores_gemma":[0.9973862,0.00022224452,0.00009475769,0.00007022108,0.00006374741,0.00007771789,0.0018928007,0.000014077211,0.00017823846],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9985221,0.0005680016,0.00036322902,0.00027649084,0.000058848666,0.00021131783],"domain_scores_gemma":[0.9993985,0.00012922143,0.0001906473,0.00019719538,0.000040845913,0.000043549997],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007604743,0.00013440728,0.0002697164,0.0001897434,0.000039228325,0.000010684649,0.00011837226,0.00023626114,0.000005238502],"category_scores_gemma":[0.0003351859,0.00012038929,0.00004003939,0.00016346673,0.00007790893,0.000005076029,0.00009763198,0.00005441379,0.00000986186],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00044394724,0.000022533706,0.009862081,0.0009358685,0.000016309003,0.000003192199,0.00009263332,9.733195e-7,0.9882697,0.00024822622,0.000014879366,0.00008964168],"study_design_scores_gemma":[0.0007150071,0.00035968694,0.09410953,0.00035785497,0.00001448735,0.000018536055,0.00012494021,0.00045086647,0.9032127,0.00008821759,0.00035607404,0.00019205961],"about_ca_topic_score_codex":0.000013146696,"about_ca_topic_score_gemma":0.00008902295,"teacher_disagreement_score":0.08505697,"about_ca_system_score_codex":0.00001016807,"about_ca_system_score_gemma":0.000071074945,"threshold_uncertainty_score":0.49093327},"labels":[],"label_agreement":null},{"id":"W4317906223","doi":"10.1186/s12870-023-04065-6","title":"Integrated metabolomic and transcriptomic study unveils the gene regulatory mechanisms of sugarcane growth promotion during interaction with an endophytic nitrogen-fixing bacteria","year":2023,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Plant-Microbe Interactions and Immunity","field":"Agricultural and Biological Sciences","cited_by":11,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ministry of Agriculture","funders":"Guangxi Academy of Agricultural Sciences; Natural Science Foundation of Guangxi Province; National Natural Science Foundation of China","keywords":"Biology; Chalcone synthase; Metabolomics; Transcriptome; Flavonoid biosynthesis; Metabolic pathway; WRKY protein domain; Bacteria; Metabolome; Gene expression; Gene; Biochemistry; Botany; Metabolite; Genetics; Bioinformatics","score_opus":0.02967450616022387,"score_gpt":0.22287137845241764,"score_spread":0.19319687229219376,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4317906223","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99895614,0.000022866989,0.000020248219,0.000049929346,0.00018985158,0.00038735443,0.00028949263,0.00007731963,0.000006806094],"genre_scores_gemma":[0.99920225,0.000040749495,0.000081263024,0.000011211576,0.000044294335,0.000033597862,0.0005663365,0.000002107244,0.000018188457],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99877554,0.00040768101,0.0002591415,0.00027257868,0.00006053459,0.00022453316],"domain_scores_gemma":[0.99952734,0.00014762607,0.00014546346,0.00008218176,0.00005421135,0.000043155942],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00032049287,0.00016050367,0.00024320462,0.000055145163,0.00022812006,0.000032725493,0.00018030865,0.00007432799,0.000052275154],"category_scores_gemma":[0.000020487922,0.00005636689,0.000040948176,0.00026316138,0.00007111878,0.00016093868,0.00004151933,0.00014107769,0.0000054198076],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0004587936,0.00013198749,0.008938581,0.0000075548746,0.000050970597,0.000003772656,0.00016894762,0.0000014323867,0.98968226,0.00008461974,0.000003070699,0.00046801165],"study_design_scores_gemma":[0.00038052586,0.001236398,0.40225762,0.000030860734,0.000050555624,0.00028335434,0.0025717393,0.00019485725,0.5924416,0.00038279628,0.00002042715,0.00014926775],"about_ca_topic_score_codex":0.0012730241,"about_ca_topic_score_gemma":0.004177044,"teacher_disagreement_score":0.39724067,"about_ca_system_score_codex":0.00002465257,"about_ca_system_score_gemma":0.000012721738,"threshold_uncertainty_score":0.23308887},"labels":[],"label_agreement":null},{"id":"W4317911200","doi":"10.1186/s12870-023-04062-9","title":"IPA1 improves drought tolerance by activating SNAC1 in rice","year":2023,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Plant Stress Responses and Tolerance","field":"Agricultural and Biological Sciences","cited_by":41,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Institute of Genetics; Institute of Genetics and Developmental Biology, Chinese Academy of Sciences; Chinese Academy of Sciences","keywords":"Biology; Oryza sativa; Abscisic acid; Drought tolerance; Reactive oxygen species; Abiotic stress; Botany; Gene; Genetically modified rice; Abiotic component; Reporter gene; Cell biology; Biochemistry; Gene expression; Genetically modified crops; Transgene","score_opus":0.024821634475580966,"score_gpt":0.23932559532453168,"score_spread":0.2145039608489507,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4317911200","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9973679,0.0003168504,0.000003264808,0.00048875844,0.00016799134,0.00012697882,0.00087077345,0.00011623406,0.0005412309],"genre_scores_gemma":[0.99782676,0.00032700287,0.000043177577,0.00022487978,0.00014888188,0.000033231896,0.00075475127,9.990448e-7,0.00064034073],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99876916,0.00011893976,0.00021650098,0.00035913003,0.00007343872,0.0004628546],"domain_scores_gemma":[0.99899966,0.00079911284,0.0000848987,0.00004893012,0.000011300766,0.00005612408],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00016588837,0.00014606933,0.00022445893,0.00002315084,0.000123551,0.000022450784,0.00025118643,0.00014487829,0.000045244866],"category_scores_gemma":[0.00008733254,0.00005854141,0.00004822172,0.0004693567,0.00004477589,0.00007307087,0.000074499774,0.0001416648,0.000088923276],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014371813,0.000029675204,0.020740353,0.000009012221,0.0000038740336,0.000014106394,0.000027445958,0.0000069358703,0.956929,0.00012749236,0.0024996132,0.019468727],"study_design_scores_gemma":[0.0004993936,0.00025078305,0.79650575,0.00007271581,0.000003195345,0.00004403366,0.00020470316,0.002110436,0.035140987,0.00046200922,0.16418862,0.0005173413],"about_ca_topic_score_codex":0.000693479,"about_ca_topic_score_gemma":0.0013140526,"teacher_disagreement_score":0.92178804,"about_ca_system_score_codex":0.000014099174,"about_ca_system_score_gemma":0.0000073896363,"threshold_uncertainty_score":0.23872493},"labels":[],"label_agreement":null},{"id":"W4318046745","doi":"10.1186/s12870-023-04048-7","title":"Direct leaf-peeling method for areca protoplasts: a simple and efficient system for protoplast isolation and transformation in areca palm (Areca catechu)","year":2023,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Plant tissue culture and regeneration","field":"Biochemistry, Genetics and Molecular Biology","cited_by":13,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Agriculture and Agri-Food Canada","funders":"Higher Education Discipline Innovation Project; Hainan University; Natural Science Foundation of Hainan Province; National Natural Science Foundation of China","keywords":"Areca; Protoplast; Biology; Catechu; Transformation (genetics); Botany; Transformation efficiency; Horticulture; Biochemistry; Agrobacterium; Gene","score_opus":0.022300140955630907,"score_gpt":0.28227009301653844,"score_spread":0.2599699520609075,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4318046745","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8377556,0.00051438384,0.15438792,0.00013184786,0.00019110885,0.0055240258,0.0013661284,0.000065465545,0.00006347484],"genre_scores_gemma":[0.9852875,0.00009259998,0.004331232,0.000024656369,0.0001972159,0.0029166474,0.007036671,0.000019144774,0.00009437111],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99893004,0.00009708513,0.00028665276,0.00038537767,0.000040516683,0.00026033874],"domain_scores_gemma":[0.9995979,0.00011256427,0.000095937365,0.000094300965,0.000055039713,0.000044228975],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005130691,0.00016317463,0.00022807313,0.00011423431,0.00014261235,0.000023652823,0.000056545097,0.00027174264,4.2031107e-7],"category_scores_gemma":[0.0000994186,0.00013060334,0.000041630363,0.00009667091,0.000026246105,0.0000064628443,0.00002247947,0.000049269627,9.631084e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006358658,0.00002184401,0.0022034124,0.00058664446,0.000027041171,8.5019536e-7,0.0003862685,0.0010428034,0.9916546,0.00029397942,0.0003652105,0.0027814936],"study_design_scores_gemma":[0.0030532237,0.0009888321,0.0010762967,0.00016532195,0.00005295046,0.00016926674,0.00071865093,0.115529515,0.8025746,0.00006171778,0.07512413,0.00048553981],"about_ca_topic_score_codex":0.00006799271,"about_ca_topic_score_gemma":0.0020494452,"teacher_disagreement_score":0.18908003,"about_ca_system_score_codex":0.000022138116,"about_ca_system_score_gemma":0.00005738382,"threshold_uncertainty_score":0.53258497},"labels":[],"label_agreement":null},{"id":"W4322488248","doi":"10.1186/s12870-023-04090-5","title":"Modulation of defense genes and phenolic compounds in wild blueberry in response to Botrytis cinerea under field conditions","year":2023,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Plant Pathogens and Fungal Diseases","field":"Biochemistry, Genetics and Molecular Biology","cited_by":16,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University","funders":"","keywords":"Botrytis cinerea; Chalcone synthase; Biology; Flavonoid; Anthocyanin; Inoculation; Vaccinium; Flavonoid biosynthesis; Gene; Phenotype; Botany; Gene expression; Horticulture; Microbiology; Transcriptome; Biochemistry","score_opus":0.022394003750634616,"score_gpt":0.2690879442074872,"score_spread":0.2466939404568526,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4322488248","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9975662,0.00024705718,0.000096001444,0.00014853565,0.00004972144,0.00012934375,0.0016871794,0.000009248744,0.00006669217],"genre_scores_gemma":[0.9980387,0.00019881273,0.00009915373,0.00021641557,0.000029298477,0.000021191934,0.0013319793,0.000006362106,0.000058087582],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99925697,0.00012806,0.00018281883,0.00022702807,0.000031255237,0.00017385338],"domain_scores_gemma":[0.9996271,0.00014341762,0.000036740672,0.00012812698,0.000014617707,0.00004998016],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014065609,0.000092418755,0.00015022604,0.00018958437,0.000022144704,0.0000038991675,0.00006264431,0.0001795355,0.0000044151448],"category_scores_gemma":[0.00009161193,0.00008806725,0.00002734186,0.00015867197,0.00003658431,0.0000023594885,0.000066184744,0.000050244573,0.0000047271874],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006703478,0.000029783756,0.14326881,0.000011244758,0.00000800659,0.000008667853,0.000025208503,0.0004893351,0.85473084,0.00020120387,0.0004362661,0.00012028775],"study_design_scores_gemma":[0.0006884821,0.00029576692,0.97924995,0.000031470085,0.000007949838,0.00004954488,0.0001182904,0.00063741475,0.017402718,0.0004161681,0.00093682733,0.00016541281],"about_ca_topic_score_codex":0.00013549431,"about_ca_topic_score_gemma":0.0017794285,"teacher_disagreement_score":0.83732814,"about_ca_system_score_codex":0.0000065634463,"about_ca_system_score_gemma":0.000042446303,"threshold_uncertainty_score":0.35912782},"labels":[],"label_agreement":null},{"id":"W4323045072","doi":"10.1186/s12870-023-04108-y","title":"Integrative analysis of green ash phloem transcripts and proteins during an emerald ash borer infestation","year":2023,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Plant Parasitism and Resistance","field":"Agricultural and Biological Sciences","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval; Natural Resources Canada; Canadian Forest Service","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Emerald ash borer; Agrilus; Biology; Infestation; Buprestidae; Fraxinus; Botany; Phloem; Proteomics; Horticulture; Gene; Genetics","score_opus":0.027653820877515473,"score_gpt":0.2501603250965117,"score_spread":0.22250650421899623,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4323045072","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99729997,0.00006443066,0.000012601702,0.000213693,0.000033235625,0.0001574336,0.0020881465,0.000053366828,0.00007712799],"genre_scores_gemma":[0.9969327,0.00014282994,0.00005861024,0.00004544857,0.00004056844,0.000017192295,0.0024596222,5.839153e-7,0.00030246854],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9991339,0.00013644558,0.00019600477,0.00026241227,0.00006824966,0.00020302397],"domain_scores_gemma":[0.99966073,0.0001222971,0.000090003785,0.000039814207,0.000029603409,0.00005755081],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013969114,0.000111600406,0.00026193078,0.000066444176,0.00010308389,0.000011663711,0.00011854025,0.00010695048,0.000036091005],"category_scores_gemma":[0.000018899704,0.000041884254,0.000062573694,0.0006251331,0.00008283602,0.00008116205,0.000021087828,0.00006713599,0.0000047899725],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009306233,0.000027754486,0.14918198,0.000015684476,0.00008999238,0.00000799097,0.00035394548,0.000010581418,0.84809345,0.0003560233,0.000054392258,0.0017151283],"study_design_scores_gemma":[0.00011304253,0.00016158196,0.990157,0.000014793296,0.00006684641,0.0000056375197,0.000244419,0.00030044632,0.008161639,0.0001681113,0.00049136276,0.000115134346],"about_ca_topic_score_codex":0.0020525686,"about_ca_topic_score_gemma":0.045632895,"teacher_disagreement_score":0.840975,"about_ca_system_score_codex":0.000005729677,"about_ca_system_score_gemma":0.000006369324,"threshold_uncertainty_score":0.9717818},"labels":[],"label_agreement":null},{"id":"W4353014862","doi":"10.1186/s12870-023-04150-w","title":"Persistence of parental age effect on somatic mutation rates across generations in Arabidopsis","year":2023,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Chromosomal and Genetic Variations","field":"Agricultural and Biological Sciences","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"University of California, San Diego; Université Laval","keywords":"Biology; Genetics; Context (archaeology); Mutation rate; Mutation Accumulation; Arabidopsis; Mutation; Frameshift mutation; Gene; Mutant","score_opus":0.04612969234327968,"score_gpt":0.27357425501870897,"score_spread":0.22744456267542928,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4353014862","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99901074,0.000022897892,0.0000013857153,0.00014286482,0.0001023053,0.00014566547,0.00047132964,0.000025254874,0.00007757534],"genre_scores_gemma":[0.99839395,0.000012193715,0.000044196713,0.000025574358,0.000054051314,0.00003456727,0.001380414,3.9939962e-7,0.000054635075],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99934715,0.000110711655,0.00016280908,0.00016537595,0.00004973388,0.00016424259],"domain_scores_gemma":[0.99941635,0.0004635492,0.00005201618,0.00003200702,0.0000116661095,0.000024394747],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014282204,0.000072673516,0.0001316137,0.000016472506,0.000091593305,0.000011296985,0.00009100479,0.00006619215,0.00004891973],"category_scores_gemma":[0.00008773152,0.000028900533,0.00005021467,0.00029835565,0.000042124404,0.000019799296,0.000026798501,0.000038199425,0.00006540663],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000027428607,0.000057702397,0.2636333,0.000011832088,0.000007657872,0.000007996427,0.00032852296,0.00025917296,0.7313462,0.00024930653,0.000045124874,0.004025766],"study_design_scores_gemma":[0.00017936298,0.0005173188,0.979089,0.000019428953,0.0000049023756,0.000009020548,0.00029613334,0.0012545668,0.017959395,0.00043551484,0.00015045649,0.00008486931],"about_ca_topic_score_codex":0.00014707154,"about_ca_topic_score_gemma":0.004920373,"teacher_disagreement_score":0.7154557,"about_ca_system_score_codex":0.000010869582,"about_ca_system_score_gemma":0.000005351479,"threshold_uncertainty_score":0.27456838},"labels":[],"label_agreement":null},{"id":"W4366820624","doi":"10.1186/s12870-023-04218-7","title":"The pan-plastome of tartary buckwheat (fagopyrum tataricum): key insights into genetic diversity and the history of lineage divergence","year":2023,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Seed and Plant Biochemistry","field":"Agricultural and Biological Sciences","cited_by":19,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ministry of Agriculture","funders":"Shanxi Agricultural University; Guangdong Science and Technology Department; Chinese Academy of Agricultural Sciences; National Natural Science Foundation of China","keywords":"Fagopyrum tataricum; Fagopyrum; Chloroplast DNA; Biology; Genetic diversity; Botany; Polygonaceae; Nucleotide diversity; Evolutionary biology; Genetics; Population; Gene; Genome; Haplotype","score_opus":0.0217519683096469,"score_gpt":0.18486427959919166,"score_spread":0.16311231128954476,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4366820624","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99503547,0.003958629,0.000001373168,0.0001637837,0.00040610315,0.00010638758,0.00019377716,0.000023049068,0.000111438465],"genre_scores_gemma":[0.9966659,0.002524583,0.00001843122,0.000064898515,0.000089923946,0.000004180926,0.00020567395,4.8842554e-7,0.0004259379],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9991572,0.00014227086,0.00020720708,0.00020764912,0.0000990761,0.00018660627],"domain_scores_gemma":[0.9983564,0.0013608395,0.00012888871,0.000079617224,0.000031437226,0.000042838645],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00024209941,0.00011109889,0.00020067442,0.000011857683,0.00035174438,0.0000034051789,0.00038967014,0.00011826091,0.000030468891],"category_scores_gemma":[0.000079279904,0.00003208542,0.00006611339,0.00014445474,0.0006134806,0.000019168716,0.00055555155,0.00009857061,0.000008998577],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00062674854,0.000039524457,0.28058118,0.00004912682,0.00005774917,0.000010456766,0.0017046909,0.000004395457,0.7064285,0.0005470783,0.006343569,0.003606943],"study_design_scores_gemma":[0.0006353856,0.0003561998,0.90105957,0.000035674257,0.000062855754,0.000032646054,0.001070217,0.00049130205,0.019415142,0.0014369481,0.07509654,0.00030752987],"about_ca_topic_score_codex":0.0026975311,"about_ca_topic_score_gemma":0.002340591,"teacher_disagreement_score":0.6870134,"about_ca_system_score_codex":0.000015389667,"about_ca_system_score_gemma":0.000016997838,"threshold_uncertainty_score":0.40778783},"labels":[],"label_agreement":null},{"id":"W4377287533","doi":"10.1186/s12870-023-04289-6","title":"Correction: Genome-scale analysis of Arabidopsis splicing-related protein kinase families reveals roles in abiotic stress adaptation","year":2023,"lang":"en","type":"erratum","venue":"BMC Plant Biology","topic":"RNA Research and Splicing","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"Biology; Adaptation (eye); Arabidopsis; Abiotic stress; Computational biology; RNA splicing; Genetics; Scale (ratio); Genome; Alternative splicing; Evolutionary biology; Gene; Neuroscience; Exon; Mutant; Cartography","score_opus":0.01657725466179897,"score_gpt":0.26017875087084064,"score_spread":0.24360149620904167,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4377287533","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.992624,0.0019732886,0.00028380792,0.000036035024,0.00195454,0.0006364697,0.0016552473,0.00003364677,0.0008030093],"genre_scores_gemma":[0.7944478,0.004510043,0.00025503067,0.000043673714,0.0006125183,0.000215155,0.055979405,0.00009880098,0.14383762],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.997398,0.0003858155,0.000736614,0.0007757078,0.00018261935,0.0005212136],"domain_scores_gemma":[0.9987434,0.00008950278,0.00041446902,0.0005195037,0.00013491203,0.00009817415],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00048411748,0.00034858534,0.0008661916,0.0010333175,0.00007024581,0.0000178121,0.00036698696,0.00107631,0.00002578924],"category_scores_gemma":[0.00036112548,0.0003216072,0.0003027852,0.0010467094,0.00016402014,0.0000039558367,0.00016667624,0.0004955008,0.000014833378],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005399078,0.00018236319,0.031806353,0.0004290955,0.0016708421,0.00003355082,0.00028605745,0.0055440217,0.93680334,0.000025999383,0.021037381,0.0016410635],"study_design_scores_gemma":[0.006362068,0.0066583958,0.59275156,0.0041940077,0.0043780566,0.000095898,0.008126986,0.16967413,0.15415464,0.00038310944,0.04719302,0.0060281088],"about_ca_topic_score_codex":0.0017958595,"about_ca_topic_score_gemma":0.032806788,"teacher_disagreement_score":0.78264874,"about_ca_system_score_codex":0.00006142324,"about_ca_system_score_gemma":0.00027195495,"threshold_uncertainty_score":0.9999236},"labels":[],"label_agreement":null},{"id":"W4378908074","doi":"10.1186/s12870-023-04306-8","title":"Identification of fusarium head blight resistance markers in a genome-wide association study of CIMMYT spring synthetic hexaploid derived wheat lines","year":2023,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Mycotoxins in Agriculture and Food","field":"Agricultural and Biological Sciences","cited_by":12,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval; University of Guelph","funders":"University of Guelph","keywords":"Biology; Fusarium; Quantitative trait locus; Single-nucleotide polymorphism; Plant disease resistance; Genome-wide association study; Genetics; Aegilops tauschii; Mycotoxin; Common wheat; Agronomy; Genome; Genotype; Biotechnology; Gene","score_opus":0.024028061188405652,"score_gpt":0.2324878794719855,"score_spread":0.20845981828357985,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4378908074","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9987669,0.00014497575,0.000002665953,0.00027538268,0.00014603909,0.00038543495,0.00013221645,0.000040134804,0.00010627691],"genre_scores_gemma":[0.99927694,0.00012766618,0.000018041206,0.00001847771,0.000061027407,0.000038399812,0.00021212241,9.705652e-7,0.00024635458],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9985448,0.00025018587,0.00052179594,0.000294155,0.00013432244,0.00025474737],"domain_scores_gemma":[0.99891174,0.00064961775,0.00026073863,0.00007807889,0.00007169804,0.000028120678],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006906973,0.000116510564,0.0002980457,0.000057256657,0.000061325234,0.000010524036,0.00022808308,0.00015115581,0.000018369567],"category_scores_gemma":[0.0002748539,0.000045510085,0.000059281112,0.00048382278,0.000025953776,0.000042119096,0.00006799788,0.000084563406,0.000017128708],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008091255,0.000121652316,0.31885645,0.000017523984,0.000016425389,0.0000012157817,0.00015925949,0.0000068360623,0.6805856,0.000023951863,0.000045775403,0.00008441108],"study_design_scores_gemma":[0.00020987603,0.00021145107,0.93055433,0.000022462971,0.000015349387,5.0632576e-7,0.00077029667,0.00001435236,0.067111805,0.0000975757,0.0008822215,0.00010978549],"about_ca_topic_score_codex":0.00024109872,"about_ca_topic_score_gemma":0.015119367,"teacher_disagreement_score":0.6134738,"about_ca_system_score_codex":0.0000428025,"about_ca_system_score_gemma":0.0000061091064,"threshold_uncertainty_score":0.8436962},"labels":[],"label_agreement":null},{"id":"W4382651690","doi":"10.1186/s12870-023-04359-9","title":"Analysis of polycomb repressive complex 2 (PRC2) subunits in Picea abies with a focus on embryo development","year":2023,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Plant Molecular Biology Research","field":"Agricultural and Biological Sciences","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Victoria","funders":"National Natural Science Foundation of China","keywords":"Biology; PRC2; Endosperm; Meristem; Gymnosperm; Embryo; Genetics; Reprogramming; Picea abies; Cell biology; Gene; Botany; Chromatin; Histone H3","score_opus":0.06490220858245495,"score_gpt":0.2764715594520105,"score_spread":0.21156935086955558,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4382651690","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99842995,0.000038347447,0.000003520651,0.000306437,0.000022113416,0.00020482311,0.00057048124,0.00005032791,0.00037401466],"genre_scores_gemma":[0.9970984,0.000040820418,0.000077558565,0.000068088055,0.00001795398,0.000034989545,0.0025482771,9.794379e-7,0.00011292714],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9983447,0.00035587096,0.00029526482,0.00042345366,0.00014292961,0.00043774123],"domain_scores_gemma":[0.9987147,0.0009365425,0.00013137567,0.000097472715,0.000053474654,0.00006643187],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00041079268,0.00015953465,0.0004421973,0.00023708481,0.00008184144,0.000009568938,0.0003499989,0.00016228764,0.00008720973],"category_scores_gemma":[0.00013816373,0.000058016358,0.000069658316,0.0017499741,0.00014727264,0.000017278473,0.00014325626,0.00014201038,0.00004656597],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00039162987,0.00006423463,0.6163004,0.000004570095,0.00020968808,0.00005390964,0.000080153404,0.000043130807,0.38030955,0.00030451332,0.00012027239,0.0021179263],"study_design_scores_gemma":[0.00020636342,0.0003893965,0.9870148,0.00001794319,0.00002473899,0.000012415631,0.00012791628,0.00022392625,0.010818652,0.0000710428,0.00093781104,0.00015504693],"about_ca_topic_score_codex":0.000625809,"about_ca_topic_score_gemma":0.022101976,"teacher_disagreement_score":0.37071434,"about_ca_system_score_codex":0.000023445793,"about_ca_system_score_gemma":0.000038537222,"threshold_uncertainty_score":0.99574214},"labels":[],"label_agreement":null},{"id":"W4383496012","doi":"10.1186/s12870-023-04333-5","title":"Genome-wide systematic characterization of the NRT2 gene family and its expression profile in wheat (Triticum aestivum L.) during plant growth and in response to nitrate deficiency","year":2023,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Plant nutrient uptake and metabolism","field":"Agricultural and Biological Sciences","cited_by":21,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ministry of Agriculture","funders":"Nature; Jiangsu Development and Reform Commission; China Agricultural University","keywords":"Biology; Genome; Gene; Genetics; Gene expression; Nitrate; Plant genetics; Plant growth; Poaceae; Botany; Agronomy; Biotechnology; Ecology","score_opus":0.02300985598869633,"score_gpt":0.20489074428393383,"score_spread":0.18188088829523752,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4383496012","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9979413,0.00037117736,0.0000010776033,0.00013856766,0.000082804836,0.00068011327,0.00075515575,0.000020909867,0.000008903733],"genre_scores_gemma":[0.9990509,0.00056775013,0.0000081973285,0.000048409758,0.000020559486,0.00006398816,0.00020166807,0.0000010232417,0.000037512968],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99870443,0.00037789266,0.00031461898,0.00025986542,0.00007985002,0.0002633192],"domain_scores_gemma":[0.99942535,0.00036907897,0.000093713024,0.000042682936,0.000016242031,0.000052953874],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00045685715,0.00011612948,0.00027765206,0.000084800085,0.00007706941,0.000010634059,0.00013523424,0.000099549645,0.0000016374352],"category_scores_gemma":[0.00023323648,0.00004367142,0.000019369094,0.00043968612,0.000026613432,0.00005876093,0.00011388964,0.00007069191,0.0000043815335],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00031909262,0.000021507029,0.081215724,0.00023940511,9.317167e-7,0.000007672778,0.00011781109,0.0000011347568,0.91804045,0.000027791282,0.0000013264066,0.0000071587706],"study_design_scores_gemma":[0.00020492783,0.00005869136,0.87484705,0.00044798307,0.0000038690923,0.000023084833,0.00010090039,0.000041384836,0.12413931,0.000017989263,0.00002683886,0.00008794518],"about_ca_topic_score_codex":0.000025710619,"about_ca_topic_score_gemma":0.000090321984,"teacher_disagreement_score":0.79390115,"about_ca_system_score_codex":0.000008970337,"about_ca_system_score_gemma":0.000012165253,"threshold_uncertainty_score":0.17808689},"labels":[],"label_agreement":null},{"id":"W4384340415","doi":"10.1186/s12870-023-04360-2","title":"A large deletion conferring pale green leaves of maize","year":2023,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Plant Gene Expression Analysis","field":"Biochemistry, Genetics and Molecular Biology","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ministry of Agriculture","funders":"","keywords":"Biology; Plastid; Genetics; Gene; Mutant; Genome; Phenotype; Chloroplast","score_opus":0.023698846889753936,"score_gpt":0.2708829331888176,"score_spread":0.2471840862990637,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4384340415","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9956116,0.00012930272,0.0023688022,0.000057826725,0.00011008222,0.000083844745,0.0007127737,0.000034836663,0.00089093286],"genre_scores_gemma":[0.9949586,0.00026307168,0.0002584836,0.000099555764,0.000115589995,0.0000130146855,0.0026680764,0.000010816381,0.0016128338],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9990178,0.00013858169,0.00021834396,0.00029179416,0.00006188301,0.00027159508],"domain_scores_gemma":[0.999521,0.000044356937,0.0001055782,0.00024119845,0.000035265366,0.00005255938],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003041597,0.00011548845,0.00020154861,0.000116370604,0.000044682063,0.00000392983,0.00018177493,0.00019315052,0.00005204954],"category_scores_gemma":[0.0001090817,0.000099603676,0.000098959834,0.00013135743,0.000048328362,0.0000015766834,0.00016257502,0.000053759766,0.00006958829],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007998008,0.00001998549,0.036966734,0.000019045807,0.00005097821,0.0000040220502,0.000024351313,0.000026295913,0.95288765,0.00025378732,0.009514267,0.00015291525],"study_design_scores_gemma":[0.0010426003,0.0002140333,0.014031882,0.00003254071,0.00004839016,0.00005630219,0.00024934215,0.0015686508,0.82449406,0.00024108199,0.15767555,0.00034557623],"about_ca_topic_score_codex":0.000048872967,"about_ca_topic_score_gemma":0.00040649436,"teacher_disagreement_score":0.14816129,"about_ca_system_score_codex":0.0000039939277,"about_ca_system_score_gemma":0.000043937303,"threshold_uncertainty_score":0.40617198},"labels":[],"label_agreement":null},{"id":"W4385477009","doi":"10.1186/s12870-023-04352-2","title":"Role of soil nutrient elements transport on Camellia oleifera yield under different soil types","year":2023,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Lipid metabolism and biosynthesis","field":"Biochemistry, Genetics and Molecular Biology","cited_by":30,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"Fujian Agriculture and Forestry University","keywords":"Camellia oleifera; Nutrient; Soil fertility; Agronomy; Fertilizer; Soil pH; Water content; Biology; Soil water; Botany; Ecology","score_opus":0.017733133809615678,"score_gpt":0.22994119461507068,"score_spread":0.212208060805455,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4385477009","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9980243,0.0003317934,0.00008155345,0.00004123974,0.00031586122,0.00013424768,0.00044151617,0.000026989634,0.00060249434],"genre_scores_gemma":[0.9971656,0.0005908983,0.000040160878,0.00015747911,0.0002882468,0.000023168202,0.0011917693,0.000016714781,0.0005259168],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9988304,0.000059150836,0.00030635277,0.000370269,0.00010061083,0.00033325978],"domain_scores_gemma":[0.99944735,0.000052632226,0.000100337784,0.00029773096,0.000028060842,0.00007391955],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001355513,0.000203102,0.00028395714,0.000085586384,0.000050291022,0.0000037286939,0.00020924756,0.00024369943,0.00004484527],"category_scores_gemma":[0.00003376694,0.00014428723,0.00012242014,0.00009039195,0.00006809993,0.0000015342148,0.000058387555,0.00007228412,0.000057111123],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00029628607,0.00017178056,0.052706167,0.00003077023,0.000094995434,0.0000011106987,0.00004019892,0.000040546925,0.9448114,0.000595749,0.00042888417,0.0007821311],"study_design_scores_gemma":[0.00039123688,0.0002705891,0.064777054,0.000020264239,0.00003251098,0.000002731858,0.000072635135,0.000036417372,0.9134968,0.00014845365,0.020554967,0.00019634365],"about_ca_topic_score_codex":0.000040937335,"about_ca_topic_score_gemma":0.00040709268,"teacher_disagreement_score":0.031314585,"about_ca_system_score_codex":0.000006335869,"about_ca_system_score_gemma":0.000057112276,"threshold_uncertainty_score":0.58838624},"labels":[],"label_agreement":null},{"id":"W4386796138","doi":"10.1186/s12870-023-04451-0","title":"Comparative transcriptomic analysis of wheat cultivars differing in their resistance to Fusarium head blight infection during grain-filling stages reveals unique defense mechanisms at play","year":2023,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Mycotoxins in Agriculture and Food","field":"Agricultural and Biological Sciences","cited_by":24,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ministry of Agriculture","funders":"Jiangsu Collaborative Innovation Center for Modern Crop Production","keywords":"Biology; Cultivar; Fusarium; Transcriptome; Plant disease resistance; Mycotoxin; Toxin; Gene; Phenotype; Grain yield; Agronomy; Gene expression; Biotechnology; Horticulture; Microbiology; Genetics","score_opus":0.04045906260738491,"score_gpt":0.25925541981845274,"score_spread":0.21879635721106783,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4386796138","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9978895,0.000092875634,0.000095114236,0.00012430722,0.00012419964,0.00036353373,0.001079491,0.000094688,0.00013625725],"genre_scores_gemma":[0.9983889,0.00017001783,0.00013253716,0.000046749035,0.000042904332,0.00005625167,0.00087086717,0.0000014957243,0.00029032002],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9982945,0.0003067098,0.00042662377,0.00046653804,0.00009900937,0.00040664393],"domain_scores_gemma":[0.99927855,0.00037710913,0.00013358243,0.000085032596,0.00004153374,0.00008418198],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00033586242,0.0002296293,0.0006419929,0.00018517316,0.00016811861,0.000015653535,0.0001919836,0.00020121939,0.000039033617],"category_scores_gemma":[0.000029647314,0.00009156984,0.0001816649,0.0017617289,0.000039749866,0.0000511494,0.000078473284,0.00014020714,0.000010485688],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00021068536,0.00003747473,0.068763494,0.000019308507,0.00010703647,0.0000044163917,0.0009242827,0.00026476537,0.92890215,0.0006700969,0.000067944326,0.000028318911],"study_design_scores_gemma":[0.00017187375,0.00014719898,0.6666319,0.000058678,0.000050657043,0.0000041931444,0.00027576133,0.000082843464,0.33146006,0.00033403854,0.0005542751,0.00022854406],"about_ca_topic_score_codex":0.00030737382,"about_ca_topic_score_gemma":0.06346707,"teacher_disagreement_score":0.5978684,"about_ca_system_score_codex":0.000081433594,"about_ca_system_score_gemma":0.000004684611,"threshold_uncertainty_score":0.9536222},"labels":[],"label_agreement":null},{"id":"W4386944211","doi":"10.1186/s12870-023-04450-1","title":"Multi-omics insights into the positive role of strigolactone perception in barley drought response","year":2023,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Plant Parasitism and Resistance","field":"Agricultural and Biological Sciences","cited_by":14,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"Narodowym Centrum Nauki; Narodowe Centrum Nauki; Deutsche Forschungsgemeinschaft; Canada Foundation for Innovation","keywords":"Biology; Transcriptome; Strigolactone; Hordeum vulgare; Jasmonic acid; Hordeum; Abscisic acid; Drought tolerance; Proteome; Gene; Botany; Mutant; Poaceae; Gene expression; Arabidopsis; Bioinformatics; Genetics","score_opus":0.018828346241728182,"score_gpt":0.24085089652407546,"score_spread":0.22202255028234727,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4386944211","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99871653,0.0002817856,0.000004137602,0.0002557496,0.000077452,0.00016144534,0.00040897957,0.00003177132,0.00006211995],"genre_scores_gemma":[0.9986497,0.00037991966,0.000081137965,0.00008037909,0.00005107886,0.0000112099815,0.00061028363,6.4236474e-7,0.00013565358],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9989017,0.00040223572,0.00020183482,0.00021972402,0.00006346472,0.00021103288],"domain_scores_gemma":[0.9989538,0.0008651747,0.00007683209,0.00005068871,0.000019955807,0.000033558874],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00031600712,0.000100794925,0.0001714093,0.00003191975,0.000104681036,0.000008635768,0.00022189143,0.00015377629,0.000018262375],"category_scores_gemma":[0.00007352505,0.000032505995,0.000046812293,0.00034520583,0.00011106944,0.000043549433,0.000059129514,0.000108416694,0.000059952497],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000668475,0.000035051722,0.030094191,0.0000024512713,0.000004672323,0.000007718868,0.000646021,0.0000077719515,0.96701986,0.0001897065,0.000061641775,0.0012624189],"study_design_scores_gemma":[0.00018462708,0.00013254462,0.98243815,0.000019695613,0.000003444498,0.000009156508,0.0012396154,0.00056546344,0.011763502,0.0003123948,0.003230898,0.00010049509],"about_ca_topic_score_codex":0.00079436006,"about_ca_topic_score_gemma":0.010380525,"teacher_disagreement_score":0.9552564,"about_ca_system_score_codex":0.000022049237,"about_ca_system_score_gemma":0.00001505319,"threshold_uncertainty_score":0.57925767},"labels":[],"label_agreement":null},{"id":"W4386981115","doi":"10.1186/s12870-023-04464-9","title":"Genome-wide identification of the longan R2R3-MYB gene family and its role in primary and lateral root","year":2023,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Plant Molecular Biology Research","field":"Agricultural and Biological Sciences","cited_by":14,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ministry of Agriculture","funders":"","keywords":"MYB; Biology; Subfamily; Transcription factor; Gene; Genetics; Genome; Gene family; Computational biology","score_opus":0.025358404610540716,"score_gpt":0.23014801560489367,"score_spread":0.20478961099435294,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4386981115","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.998304,0.00069128734,5.308922e-7,0.00032053553,0.000044829165,0.00020928551,0.0003615017,0.000018218238,0.000049788214],"genre_scores_gemma":[0.99891526,0.00028255483,0.0000044636367,0.00007111148,0.000026006277,0.0000130459075,0.0005693552,6.9708216e-7,0.000117504605],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99901366,0.00023104576,0.0001958157,0.00026043496,0.000060632556,0.00023838574],"domain_scores_gemma":[0.99957895,0.00024969905,0.000065737906,0.00005015759,0.00001863204,0.00003680433],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00040837243,0.00008425949,0.00015279323,0.00003124427,0.0000726643,0.000011464612,0.00020611394,0.0001377916,0.0000042708984],"category_scores_gemma":[0.00007397678,0.00003081338,0.000024369614,0.0002333453,0.00010418479,0.000025207619,0.000223467,0.00010026615,0.000012642662],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000022668717,0.000006958617,0.38026008,0.00000483857,0.0000035739902,0.0000025107506,0.000016181013,8.6010067e-7,0.6193078,0.00003151657,0.000008900649,0.00033407213],"study_design_scores_gemma":[0.000101674836,0.000059772694,0.96996343,0.0000051923143,0.0000027084304,0.000023160916,0.000022367778,0.00009904629,0.029061299,0.00020119644,0.00039410978,0.00006603306],"about_ca_topic_score_codex":0.00008897815,"about_ca_topic_score_gemma":0.0010298761,"teacher_disagreement_score":0.59024656,"about_ca_system_score_codex":0.0000092680275,"about_ca_system_score_gemma":0.000011950196,"threshold_uncertainty_score":0.12565331},"labels":[],"label_agreement":null},{"id":"W4387965148","doi":"10.1186/s12870-023-04545-9","title":"Cytological and transcriptomic analysis to unveil the mechanism of web blotch resistance in Peanut","year":2023,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Peanut Plant Research Studies","field":"Agricultural and Biological Sciences","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ministry of Agriculture","funders":"Henan Academy of Agricultural Sciences","keywords":"Biology; Transcriptome; Plant disease resistance; Botany; Phenylpropanoid; Biochemistry; Biosynthesis; Gene expression; Gene","score_opus":0.04832359072670284,"score_gpt":0.263695757094316,"score_spread":0.21537216636761314,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4387965148","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9960815,0.00028381977,0.00000548039,0.002316886,0.000029898676,0.00018572273,0.00071865873,0.000040425697,0.00033765598],"genre_scores_gemma":[0.9986372,0.00063695933,0.000057382716,0.00010064138,0.00003498026,0.000029405479,0.0002929939,2.0948151e-7,0.00021020923],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9987408,0.00026446016,0.0002183227,0.00030993557,0.00010910741,0.00035739623],"domain_scores_gemma":[0.998849,0.00096863724,0.00004296599,0.000060108934,0.000021640159,0.000057682813],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00066639675,0.000110032764,0.00032195603,0.000077908444,0.00009948608,0.00001079674,0.00029877666,0.000085974076,0.000036484504],"category_scores_gemma":[0.000155294,0.000033421537,0.00007385693,0.0012020436,0.00013113962,0.000016901568,0.00013091323,0.00010789838,0.000004650001],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003054297,0.00004845641,0.13553427,0.000016383778,0.00014047859,0.000029811916,0.00028131637,0.00000588979,0.84968954,0.011318066,0.0019868764,0.00064348633],"study_design_scores_gemma":[0.00021919055,0.00024554651,0.9844289,0.000015263562,0.00004932521,0.000005917664,0.00062371657,0.00029342354,0.0023206729,0.003735021,0.007883369,0.00017964763],"about_ca_topic_score_codex":0.0002625224,"about_ca_topic_score_gemma":0.04787637,"teacher_disagreement_score":0.84889466,"about_ca_system_score_codex":0.000011391217,"about_ca_system_score_gemma":0.000009145952,"threshold_uncertainty_score":0.9694974},"labels":[],"label_agreement":null},{"id":"W4387973959","doi":"10.1186/s12870-023-04527-x","title":"Organic amendments improve salinity-induced osmotic and oxidative stress tolerance in Okra (Abelmoschus esculentus (L.)Moench)","year":2023,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Plant Stress Responses and Tolerance","field":"Agricultural and Biological Sciences","cited_by":18,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"Princess Nourah Bint Abdulrahman University","keywords":"Abelmoschus; Proline; Superoxide dismutase; Salinity; Malondialdehyde; Sugar; Compost; Food science; Antioxidant; Catalase; Biology; Horticulture; Agronomy; Biochemistry","score_opus":0.03128318362359974,"score_gpt":0.24687638445930057,"score_spread":0.21559320083570083,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4387973959","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99728924,0.0002033958,0.0000020253551,0.00024307065,0.00028973128,0.0002856382,0.001487398,0.0000968367,0.000102655256],"genre_scores_gemma":[0.9983026,0.0005756196,0.00002695977,0.00012833488,0.00011468945,0.000033675937,0.00066481985,0.0000018467431,0.00015145671],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9982722,0.00023312963,0.00029800966,0.00053658994,0.00010990583,0.00055016414],"domain_scores_gemma":[0.99905324,0.0006147156,0.00011813027,0.00007803108,0.000022810624,0.000113045826],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00019718187,0.00022561851,0.00034641856,0.000044976976,0.000140644,0.000036810743,0.000254469,0.00018796787,0.00008933684],"category_scores_gemma":[0.00010500325,0.00010008209,0.00004661132,0.0004376583,0.00007239598,0.000084092324,0.00014312031,0.00020526038,0.00008540936],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00018487907,0.0000845636,0.105675265,0.000019883353,0.000015670184,0.00004632292,0.00008661696,0.000006024079,0.8855652,0.00017380182,0.00006475384,0.008076999],"study_design_scores_gemma":[0.0009700607,0.0006773609,0.95238394,0.00012185048,0.0000140535585,0.00004280599,0.00033521387,0.0011429685,0.040600125,0.00053451024,0.0026670478,0.00051006424],"about_ca_topic_score_codex":0.00071845844,"about_ca_topic_score_gemma":0.0047087283,"teacher_disagreement_score":0.84670866,"about_ca_system_score_codex":0.000024457364,"about_ca_system_score_gemma":0.000017058617,"threshold_uncertainty_score":0.40812293},"labels":[],"label_agreement":null},{"id":"W4388495305","doi":"10.1186/s12870-023-04502-6","title":"Transcriptomic characterization of Trichoderma harzianum T34 primed tomato plants: assessment of biocontrol agent induced host specific gene expression and plant growth promotion","year":2023,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Plant-Microbe Interactions and Immunity","field":"Agricultural and Biological Sciences","cited_by":26,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University","funders":"Science and Engineering Research Board; Indian Agricultural Research Institute; King Saud University; Indian Council of Agricultural Research; Department of Science and Technology, Ministry of Science and Technology, India","keywords":"Biology; Trichoderma; Trichoderma harzianum; Gene; Gene expression; Transcriptome; In silico; Gene expression profiling; Botany; Genetics; Biological pest control","score_opus":0.04500966434161106,"score_gpt":0.25035743405764294,"score_spread":0.20534776971603189,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4388495305","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99443,0.000033868873,0.000085562606,0.00013117069,0.0002751396,0.00045379967,0.004506034,0.000055831413,0.000028563472],"genre_scores_gemma":[0.9929408,0.00052475743,0.000091763264,0.000018292589,0.000065083696,0.00003230148,0.006301311,0.000001783528,0.000023921002],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99869704,0.0002410421,0.00045246325,0.0002757096,0.000094727904,0.0002390432],"domain_scores_gemma":[0.99934083,0.00017825932,0.00030195905,0.000071318536,0.000048613932,0.000059008904],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00025166184,0.00016570395,0.0003480727,0.00009048482,0.000108370885,0.000018382467,0.00017166384,0.00017139953,0.000060820606],"category_scores_gemma":[0.000017814578,0.000075464435,0.00006683202,0.00020249517,0.000044522032,0.00011431148,0.00005178432,0.0001206238,0.0000062096597],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015996925,0.00016886466,0.010950797,0.000028860455,0.000020118356,0.000002802959,0.00008735065,2.1786346e-7,0.9874151,0.000041374093,0.000096892116,0.0010276948],"study_design_scores_gemma":[0.00033340542,0.00027591235,0.42114487,0.00006247028,0.000007817196,0.00003928807,0.00007636849,0.00022407439,0.5773778,0.000012454919,0.0003454631,0.000100043406],"about_ca_topic_score_codex":0.00013199986,"about_ca_topic_score_gemma":0.0000788003,"teacher_disagreement_score":0.4101941,"about_ca_system_score_codex":0.00002530983,"about_ca_system_score_gemma":0.000017551496,"threshold_uncertainty_score":0.30773503},"labels":[],"label_agreement":null},{"id":"W4388774514","doi":"10.1186/s12870-023-04600-5","title":"Regulation of an endophytic nitrogen-fixing bacteria GXS16 promoting drought tolerance in sugarcane","year":2023,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Plant-Microbe Interactions and Immunity","field":"Agricultural and Biological Sciences","cited_by":13,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ministry of Agriculture","funders":"Guangxi Academy of Agricultural Sciences; Natural Science Foundation of Guangxi Province; National Natural Science Foundation of China","keywords":"Biology; Drought tolerance; Saccharum officinarum; Inoculation; Crop; Abscisic acid; Botany; Expansin; Gene; Horticulture; Agronomy; Gene expression; Biochemistry","score_opus":0.029557856591537146,"score_gpt":0.2407725100267877,"score_spread":0.21121465343525056,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4388774514","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99915665,0.000026847221,0.00000127886,0.00007114142,0.00017902332,0.00012824804,0.00026971273,0.000052340107,0.00011472685],"genre_scores_gemma":[0.99839735,0.000023512835,0.00012948096,0.000020896745,0.000099158424,0.000011163888,0.0012684606,8.3537054e-7,0.000049123504],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99905694,0.00017917255,0.00027280566,0.0002011118,0.000041321233,0.0002486663],"domain_scores_gemma":[0.9995103,0.0002533675,0.000121190606,0.000057310863,0.00002580075,0.000032069616],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00026077122,0.00009576225,0.00018777131,0.000039193008,0.00008318713,0.000013956387,0.00016348818,0.00009222841,0.00012418484],"category_scores_gemma":[0.000058668527,0.00004320472,0.000039106562,0.0003239179,0.00003608681,0.00011454893,0.00004972907,0.00010232254,0.000027685055],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000055816243,0.00004289555,0.047354992,0.000009348997,0.0000033637518,0.0000032823173,0.0000653033,0.000011035421,0.9487602,0.000065094704,0.000020717944,0.0036079152],"study_design_scores_gemma":[0.00023284112,0.0002855766,0.78758866,0.000090701644,0.000004529678,0.000109740235,0.00020317166,0.003023362,0.20516062,0.00078398857,0.0023333596,0.00018343588],"about_ca_topic_score_codex":0.0010178875,"about_ca_topic_score_gemma":0.004908377,"teacher_disagreement_score":0.7435996,"about_ca_system_score_codex":0.00001911105,"about_ca_system_score_gemma":0.00001122901,"threshold_uncertainty_score":0.27389893},"labels":[],"label_agreement":null},{"id":"W4389149307","doi":"10.1186/s12870-023-04622-z","title":"Integrated transcriptomic and proteomic analyses of two sugarcane (Saccharum officinarum Linn.) varieties differing in their lodging tolerance","year":2023,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Sugarcane Cultivation and Processing","field":"Agricultural and Biological Sciences","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ministry of Agriculture","funders":"Science and Technology Major Project of Guangxi; Guangxi Academy of Agricultural Sciences; National Natural Science Foundation of China","keywords":"Biology; Phenylpropanoid; Saccharum officinarum; Transcriptome; Gene; Gene expression; Sugar; RNA-Seq; Botany; Biotechnology; Biochemistry","score_opus":0.08712429342414638,"score_gpt":0.2915874613330408,"score_spread":0.20446316790889443,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4389149307","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9989703,0.00026952525,0.000044135268,0.0002543946,0.00007652593,0.00016084692,0.00011235535,0.00007570889,0.00003620608],"genre_scores_gemma":[0.9994104,0.00011032598,0.00008286685,0.00006349503,0.00004650764,0.000015848098,0.00022969651,0.0000013041587,0.00003958777],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9990198,0.00012591535,0.0002816699,0.0002593425,0.00004907505,0.0002641893],"domain_scores_gemma":[0.99955785,0.00024933412,0.000091458576,0.000035660192,0.000029043384,0.000036637928],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00023684421,0.00014256373,0.0002942939,0.000049982904,0.00008302886,0.000020225545,0.0001388507,0.00008822164,0.000045315697],"category_scores_gemma":[0.00005222861,0.000056140478,0.0000409445,0.0005104291,0.00009900206,0.00005214583,0.0000359117,0.0001253815,0.0000028927564],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009441261,0.000018693732,0.09116421,0.00002719366,0.000006706157,0.0000016082358,0.0002933319,0.00003300329,0.8986453,0.00009439933,0.0000075997577,0.009613573],"study_design_scores_gemma":[0.00089114875,0.00025517493,0.72011864,0.00020155215,0.000011890544,0.00002551591,0.002077459,0.011265811,0.26314184,0.0010005934,0.0006500736,0.00036032972],"about_ca_topic_score_codex":0.0009624536,"about_ca_topic_score_gemma":0.0025115893,"teacher_disagreement_score":0.6355034,"about_ca_system_score_codex":0.000012504698,"about_ca_system_score_gemma":0.000014083732,"threshold_uncertainty_score":0.22893423},"labels":[],"label_agreement":null},{"id":"W4390507469","doi":"10.1186/s12870-023-04691-0","title":"Identification and characterization of yellow stripe-like genes in maize suggest their roles in the uptake and transport of zinc and iron","year":2024,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Photosynthetic Processes and Mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":28,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Biotechnology Research Institute","funders":"National Science and Technology Major Project; National Natural Science Foundation of China","keywords":"Biology; Oryza sativa; Arabidopsis; Hordeum vulgare; Gene; Intron; Biofortification; Subcellular localization; Genetics; Genome; Cell biology; Botany; Zinc; Poaceae","score_opus":0.009565098556661801,"score_gpt":0.21862438931746755,"score_spread":0.20905929076080576,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4390507469","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99741197,0.0016350988,0.00044515796,0.000040552502,0.00004151963,0.00013112962,0.00028122432,0.000002207649,0.000011154799],"genre_scores_gemma":[0.99470276,0.0048630415,0.00002580558,0.000018062903,0.000014316059,0.000011880242,0.00034550202,0.000004185801,0.000014419927],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9995081,0.00003464969,0.00017979994,0.00017885603,0.000022639226,0.00007595151],"domain_scores_gemma":[0.9998405,0.000019433222,0.00004599858,0.000073210154,0.000009007645,0.00001186278],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00021855706,0.000069852154,0.000109945555,0.000046501995,0.0000102369495,0.00000510832,0.000054285727,0.00009928021,0.0000010313152],"category_scores_gemma":[0.00000719756,0.000047880138,0.000012163258,0.000044847016,0.00007005184,0.0000036478834,0.000016446524,0.00003192716,6.0254095e-8],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00005203481,0.000017951535,0.0053095524,0.000119318946,0.000004706039,8.8212664e-7,0.00020553567,4.1146657e-7,0.9908605,0.00039699808,5.2610375e-7,0.0030315802],"study_design_scores_gemma":[0.00021719943,0.00012429211,0.057634212,0.000046440826,0.000012477452,0.00004158637,0.00024797695,0.00022029258,0.9396925,0.00030690504,0.0013844969,0.000071636015],"about_ca_topic_score_codex":0.000024434692,"about_ca_topic_score_gemma":0.0004358018,"teacher_disagreement_score":0.05232466,"about_ca_system_score_codex":0.0000014110138,"about_ca_system_score_gemma":0.000023981967,"threshold_uncertainty_score":0.19524953},"labels":[],"label_agreement":null},{"id":"W4390507957","doi":"10.1186/s12870-023-04689-8","title":"Boron homeostasis affects Longan yield: a study of NIP and BOR boron transporter of two cultivars","year":2024,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Plant Micronutrient Interactions and Effects","field":"Agricultural and Biological Sciences","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ministry of Agriculture","funders":"Basic and Applied Basic Research Foundation of Guangdong Province; Special Project for Research and Development in Key areas of Guangdong Province","keywords":"Biology; Transporter; Cultivar; Gene; Gene expression; Pollen; Botany; Cell biology; Horticulture; Biochemistry","score_opus":0.029628793118740143,"score_gpt":0.2606012670650224,"score_spread":0.23097247394628226,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4390507957","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99684423,0.0013428738,0.000007819958,0.000068105146,0.00018792307,0.00033726785,0.0011077299,0.0000359167,0.00006811395],"genre_scores_gemma":[0.999419,0.0001814617,0.000024734352,0.000019396375,0.000054257904,0.000014638565,0.0002508719,0.0000011035557,0.000034589502],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9991288,0.00010234059,0.00021000991,0.00029696318,0.000062894906,0.00019899046],"domain_scores_gemma":[0.99918693,0.00062570476,0.000069878195,0.0000498147,0.000017259168,0.000050426737],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00016211762,0.00014030498,0.0003216943,0.00003981085,0.00004783504,0.00001391888,0.00010835422,0.00009204714,0.00008069029],"category_scores_gemma":[0.000013586262,0.00005399835,0.00008563557,0.0001629951,0.000054562093,0.00006467204,0.000029068024,0.00010126355,0.0000047994745],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002621944,0.00046309375,0.055134434,0.00011200455,0.0002706779,0.00003177495,0.00048622384,0.0000025554853,0.93317163,0.0001791235,0.0006531889,0.009233114],"study_design_scores_gemma":[0.002056409,0.015596534,0.7308446,0.0007098681,0.0016063214,0.00050504983,0.004083162,0.0003761702,0.21806575,0.00025887013,0.02475881,0.0011384693],"about_ca_topic_score_codex":0.0015377342,"about_ca_topic_score_gemma":0.0051351865,"teacher_disagreement_score":0.7151059,"about_ca_system_score_codex":0.00000824749,"about_ca_system_score_gemma":0.000008151766,"threshold_uncertainty_score":0.28655547},"labels":[],"label_agreement":null},{"id":"W4390613688","doi":"10.1186/s12870-023-04706-w","title":"Identification and characterization of circular RNAs involved in the fertility stability of cotton CMS-D2 restorer line under heat stress","year":2024,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Circular RNAs in diseases","field":"Biochemistry, Genetics and Molecular Biology","cited_by":10,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ministry of Agriculture","funders":"Natural Science Foundation of Henan Province; Chinese Academy of Agricultural Sciences","keywords":"Biology; Cytoplasmic male sterility; Genetics; Circular RNA; RNA; Pollen; microRNA; Cell biology; Gene knockdown; Competing endogenous RNA; Computational biology; RNase P; Gene; Botany; Long non-coding RNA","score_opus":0.029053317983015792,"score_gpt":0.2724433511354516,"score_spread":0.2433900331524358,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4390613688","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9953989,0.0017995032,0.0016025343,0.00007233584,0.000118504424,0.0002540039,0.000739732,0.0000070112183,0.000007519802],"genre_scores_gemma":[0.99746406,0.00020607903,0.000012589553,0.00003096147,0.000038877683,0.000019258532,0.002217803,0.000007078006,0.0000033022607],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99890846,0.00028362274,0.00031648658,0.0003084456,0.00007306703,0.00010993488],"domain_scores_gemma":[0.99944353,0.0000617748,0.00006396179,0.00035564965,0.000052138643,0.000022931747],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00042691772,0.00009637126,0.0001499355,0.000051687686,0.000019176787,0.000010519018,0.00014292,0.00014551567,0.0000072232465],"category_scores_gemma":[0.00013159029,0.00007356192,0.000052122236,0.000099529556,0.00019149749,0.000005176201,0.0000566485,0.00006311344,5.4449663e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009972806,0.000082567414,0.15651208,0.00020636982,0.00002088966,7.434363e-7,0.000076061515,0.000006214658,0.8426757,0.00023068246,0.000005397976,0.000083603656],"study_design_scores_gemma":[0.00014177116,0.00006067405,0.5018846,0.000029734729,0.000020998945,0.000003392357,0.000096867094,0.00025442202,0.4970599,0.0002187249,0.0001663733,0.00006257465],"about_ca_topic_score_codex":0.00008007395,"about_ca_topic_score_gemma":0.00028866806,"teacher_disagreement_score":0.34561577,"about_ca_system_score_codex":0.000014067183,"about_ca_system_score_gemma":0.00007372525,"threshold_uncertainty_score":0.2999768},"labels":[],"label_agreement":null},{"id":"W4390756884","doi":"10.1186/s12870-023-04688-9","title":"Biochemical and proteomic response of the freshwater green alga Pseudochlorella pringsheimii to iron and salinity stressors","year":2024,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Algal biology and biofuel production","field":"Energy","cited_by":13,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Agriculture and Agri-Food Canada; Algoma University","funders":"Agriculture and Agri-Food Canada; Science and Technology Development Fund","keywords":"Biology; Proteome; Carotenoid; Biochemistry; Photosynthesis; Salinity; Metabolism; Proteomics; Algae; Botany; Ecology; Gene","score_opus":0.01794255612669765,"score_gpt":0.24199588645185569,"score_spread":0.22405333032515803,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4390756884","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9975062,0.00055076473,0.000009241457,0.0011605856,0.0002511541,0.00022837028,0.00020095726,0.000042771528,0.00004993071],"genre_scores_gemma":[0.99905115,0.000045793466,0.000354266,0.00010507048,0.0001263174,0.000016429258,0.000043055807,0.000008055975,0.0002498608],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9989838,0.0002550847,0.00018497501,0.0003575028,0.00003689412,0.00018176588],"domain_scores_gemma":[0.99956423,0.00016219814,0.000037951788,0.00017464467,0.000014769635,0.00004622288],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00035815279,0.00012660057,0.00015829508,0.000062227075,0.00005774518,0.000008618693,0.00011406899,0.0002498433,0.00002460498],"category_scores_gemma":[0.00014862399,0.00007172229,0.00003253284,0.000080018195,0.00029187778,0.000019897028,0.00014334082,0.00016129807,0.0000148241215],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0016213113,0.00001399653,0.020120798,0.000090517795,0.000026410022,0.000002495231,0.00018540403,0.0000022025508,0.9752987,0.0016116404,0.00044402565,0.0005824757],"study_design_scores_gemma":[0.00026468458,0.000337431,0.061265085,0.00007481068,0.000037059304,0.00016832056,0.000029764744,0.000102955666,0.9208856,0.002138073,0.0144995805,0.00019663174],"about_ca_topic_score_codex":0.0005417894,"about_ca_topic_score_gemma":0.0004116232,"teacher_disagreement_score":0.05441312,"about_ca_system_score_codex":0.000012879134,"about_ca_system_score_gemma":0.000028412607,"threshold_uncertainty_score":0.292475},"labels":[],"label_agreement":null},{"id":"W4391932498","doi":"10.1186/s12870-024-04818-x","title":"Impact of glyphosate and glyphosate-based herbicides on phyllospheric Methylobacterium","year":2024,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Pesticide and Herbicide Environmental Studies","field":"Environmental Science","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Trent University","funders":"Natural Sciences and Engineering Research Council of Canada; Trent University","keywords":"Methylobacterium; Glyphosate; Biology; Phyllosphere; Bacteria; Food science; Horticulture; Biotechnology; 16S ribosomal RNA","score_opus":0.0167966856090433,"score_gpt":0.2677706068073275,"score_spread":0.2509739211982842,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4391932498","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99655795,0.0009879471,0.0001561508,0.00005752747,0.00012658468,0.00014335146,0.00018062296,0.00005341913,0.0017364711],"genre_scores_gemma":[0.998828,0.00007572008,0.0007725209,0.00012257975,0.000031947624,0.000015232941,0.00004704989,0.00001534938,0.000091621],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99887234,0.00007587686,0.00022704637,0.00040330083,0.00010374723,0.00031767922],"domain_scores_gemma":[0.99942756,0.0002632648,0.000058750436,0.00016409138,0.0000016819812,0.000084678926],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00014602504,0.00022865112,0.00029558846,0.000033897297,0.00006283795,0.000016081049,0.0001301961,0.00009939593,0.0019204686],"category_scores_gemma":[0.000024370329,0.00015739522,0.00011420212,0.00014004814,0.0003990041,0.00005716385,0.0001337532,0.00011432933,0.00028843537],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00020617104,0.000084891515,0.4278518,0.000037991715,0.0000717938,0.000024704354,0.00009117104,0.00046371613,0.5664217,0.00013301928,0.00065300683,0.0039600525],"study_design_scores_gemma":[0.00028108817,0.0009873849,0.9820455,0.00004809657,0.000037275786,0.000019393176,0.000018456522,0.0008298966,0.012621071,0.0005241094,0.002355776,0.00023195763],"about_ca_topic_score_codex":0.0038097487,"about_ca_topic_score_gemma":0.00031132414,"teacher_disagreement_score":0.55419374,"about_ca_system_score_codex":0.00013889017,"about_ca_system_score_gemma":0.000015160082,"threshold_uncertainty_score":0.9989919},"labels":[],"label_agreement":null},{"id":"W4392292393","doi":"10.1186/s12870-024-04841-y","title":"Characterization of indigenous populations of cannabis in Iran: a morphological and phenological study","year":2024,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Cannabis and Cannabinoid Research","field":"Medicine","cited_by":12,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"","keywords":"Biology; Phenology; Heritability; Indigenous; Population; Phenotypic trait; Crop; Genetic diversity; Ecology; Demography; Phenotype; Evolutionary biology; Genetics","score_opus":0.06981073310286894,"score_gpt":0.33883952011671087,"score_spread":0.2690287870138419,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4392292393","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99824345,0.00033959738,0.000053144504,0.00047833534,0.000070171765,0.0005537469,0.00019271797,0.00001781965,0.000051035953],"genre_scores_gemma":[0.9993151,0.000048133694,0.000051849554,0.000023017037,0.000032275475,0.00004287259,0.00022177938,0.0000050812882,0.00025993722],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9991516,0.00010279709,0.00029059494,0.0002109066,0.00008103698,0.000163059],"domain_scores_gemma":[0.9997694,0.000014820801,0.000038221107,0.00010268706,0.000029381557,0.00004549386],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00023563865,0.00007710262,0.00030466093,0.0002384673,0.000016940196,0.0000042205806,0.000048255002,0.00012823728,0.000069029666],"category_scores_gemma":[0.000080791855,0.00005195615,0.000033795466,0.00024186194,0.0001277739,0.000016793914,0.000048736212,0.00014447785,0.0000017336093],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00026802518,0.0004144504,0.70810676,0.00012775908,0.00001989715,0.000109785644,0.00094367913,8.847517e-7,0.28744853,0.00071551674,0.000091610025,0.001753102],"study_design_scores_gemma":[0.00053460395,0.0014968605,0.99518216,0.00003355548,0.000021839083,0.00018195913,0.00025841774,0.00013410943,0.0014448008,0.00010984467,0.0005476643,0.00005418591],"about_ca_topic_score_codex":0.00048370045,"about_ca_topic_score_gemma":0.00044360952,"teacher_disagreement_score":0.28707537,"about_ca_system_score_codex":0.000023816945,"about_ca_system_score_gemma":0.0000855125,"threshold_uncertainty_score":0.21187103},"labels":[],"label_agreement":null},{"id":"W4392352815","doi":"10.1186/s12870-024-04808-z","title":"Lipid mediated plant immunity in susceptible and tolerant soybean cultivars in response to Phytophthora sojae colonization and infection","year":2024,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Lipid metabolism and biosynthesis","field":"Biochemistry, Genetics and Molecular Biology","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Western University; Agriculture and Agri-Food Canada; Memorial University of Newfoundland","funders":"Natural Sciences and Engineering Research Council of Canada; Memorial University of Newfoundland","keywords":"Biology; Phytophthora sojae; Phytophthora; Cultivar; Jasmonic acid; Botany; Population; Salicylic acid; Biochemistry","score_opus":0.013342240389804735,"score_gpt":0.2548687688284669,"score_spread":0.24152652843866212,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4392352815","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99809813,0.00090371125,0.000101458114,0.00014642456,0.00025649698,0.00023040742,0.00021589916,0.000020126303,0.000027345537],"genre_scores_gemma":[0.9983164,0.00056917995,0.00022557228,0.000097611664,0.00013215412,0.000026623657,0.00057458744,0.000011483516,0.000046397665],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99879104,0.00036026165,0.00022493079,0.00035783285,0.00003903265,0.00022688141],"domain_scores_gemma":[0.99962556,0.00013553095,0.000030600913,0.00012534317,0.000016911588,0.00006607344],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00062144385,0.0001469409,0.00019943736,0.00023215156,0.000042933916,0.0000260612,0.00006146132,0.00024172378,0.0000060938073],"category_scores_gemma":[0.0002778698,0.0001225769,0.00002024585,0.00019951198,0.000059418413,0.0000073311076,0.00009994556,0.000109451044,0.0000067037954],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0011596493,0.00004535196,0.080798596,0.000045672732,0.000011553899,0.000007593886,0.00019262344,0.000006649973,0.91646975,0.00003513043,0.0001556936,0.0010717151],"study_design_scores_gemma":[0.001181172,0.00076512195,0.6096623,0.00016062429,0.0000206428,0.00013377046,0.00015381745,0.0007675164,0.3013096,0.00003269677,0.08534753,0.00046524315],"about_ca_topic_score_codex":0.00029320133,"about_ca_topic_score_gemma":0.002764025,"teacher_disagreement_score":0.61516017,"about_ca_system_score_codex":0.000017000262,"about_ca_system_score_gemma":0.000087708104,"threshold_uncertainty_score":0.49985406},"labels":[],"label_agreement":null},{"id":"W4392714917","doi":"10.1186/s12870-023-04708-8","title":"Genetic mapping of deoxynivalenol and fusarium damaged kernel resistance in an adapted durum wheat population","year":2024,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Mycotoxins in Agriculture and Food","field":"Agricultural and Biological Sciences","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of Saskatchewan; National Research Council Canada; Agriculture and Agri-Food Canada","funders":"National Research Council Canada; Agriculture and Agri-Food Canada; Ministry of Agriculture - Saskatchewan","keywords":"Biology; Quantitative trait locus; Fusarium; Cultivar; Population; Locus (genetics); Plant disease resistance; Agronomy; Genetics; Gene","score_opus":0.02989779920942881,"score_gpt":0.22640398969822195,"score_spread":0.19650619048879314,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4392714917","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99680126,0.0021507766,0.0000147691335,0.00014601856,0.00011563651,0.00015935225,0.00020227373,0.00004507092,0.00036486023],"genre_scores_gemma":[0.99857515,0.00016781232,0.00060071104,0.000031750307,0.00013201103,0.000009024873,0.00038270905,7.773241e-7,0.000100048754],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9991008,0.00012809961,0.00023182745,0.00029792622,0.000055057164,0.00018626271],"domain_scores_gemma":[0.99970776,0.00014427757,0.00004510666,0.000045178782,0.00001568515,0.000042012038],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013868026,0.00010840318,0.00017871197,0.000029981113,0.000046285135,0.000020751806,0.000117492615,0.00015543021,0.00003775091],"category_scores_gemma":[0.00002012578,0.00004111145,0.000028976787,0.00022967925,0.000036030877,0.000060479404,0.000038184153,0.00010068871,0.0000036019283],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00005676709,0.00003211793,0.26105362,0.00005178598,0.0000073284846,0.000010092859,0.00016616011,0.000001908905,0.7329377,0.0023153187,0.00009305837,0.0032741562],"study_design_scores_gemma":[0.0000856717,0.00014266682,0.9940063,0.00006371788,0.000005809594,0.00001665299,0.00015167265,0.00015928289,0.0010903447,0.0011724865,0.0029799386,0.00012549698],"about_ca_topic_score_codex":0.00021701612,"about_ca_topic_score_gemma":0.0091551505,"teacher_disagreement_score":0.73295265,"about_ca_system_score_codex":0.000011928618,"about_ca_system_score_gemma":0.0000044678977,"threshold_uncertainty_score":0.51087886},"labels":[],"label_agreement":null},{"id":"W4393052909","doi":"10.1186/s12870-024-04877-0","title":"Transcriptome sequencing and expression analysis in peanut reveal the potential mechanism response to Ralstonia solanacearum infection","year":2024,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Peanut Plant Research Studies","field":"Agricultural and Biological Sciences","cited_by":12,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ministry of Agriculture","funders":"Henan Provincial Science and Technology Research Project; Henan Academy of Agricultural Sciences","keywords":"Biology; Ralstonia solanacearum; Bacterial wilt; Transcriptome; Genetics; Gene; Quantitative trait locus; Plant disease resistance; Arachis hypogaea; Hypersensitive response; Pathogen; Microbiology; Gene expression; Botany","score_opus":0.030960745128887773,"score_gpt":0.267619377688753,"score_spread":0.23665863255986522,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4393052909","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99678534,0.00048618796,0.00015404851,0.0018342537,0.00012430684,0.00021796943,0.00029775585,0.00006489654,0.00003525564],"genre_scores_gemma":[0.99896955,0.0002509555,0.00006842719,0.00009240709,0.0001341381,0.000027911,0.00022889071,4.066419e-7,0.0002273127],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9983726,0.0006208557,0.00018132973,0.0003677874,0.00011518304,0.00034223276],"domain_scores_gemma":[0.9992581,0.00058284466,0.00002315369,0.000049917926,0.000015989148,0.000069995],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0012054556,0.00012737884,0.00021000837,0.0001213936,0.00019175654,0.00006841721,0.00013563207,0.000099526675,0.000037836584],"category_scores_gemma":[0.00010958365,0.00004111215,0.00008228011,0.000633027,0.000055135806,0.00006352788,0.00010908907,0.00018588059,0.0000046037767],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00033307396,0.0000071536683,0.0070242193,0.000007585735,0.00003809288,0.000032471355,0.0001975756,0.000017379385,0.9909775,0.00015377154,0.00036268128,0.0008484428],"study_design_scores_gemma":[0.00035305775,0.0010900169,0.93066895,0.00019012652,0.00018619877,0.0001842078,0.0009971915,0.0034736888,0.041143823,0.0024734635,0.018645305,0.00059397507],"about_ca_topic_score_codex":0.0012110743,"about_ca_topic_score_gemma":0.00570788,"teacher_disagreement_score":0.94983375,"about_ca_system_score_codex":0.00005637328,"about_ca_system_score_gemma":0.000017661296,"threshold_uncertainty_score":0.31851313},"labels":[],"label_agreement":null},{"id":"W4393385451","doi":"10.1186/s12870-024-04867-2","title":"Genome-wide identification of tea plant (Camellia sinensis) BAHD acyltransferases reveals their role in response to herbivorous pests","year":2024,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Plant Gene Expression Analysis","field":"Biochemistry, Genetics and Molecular Biology","cited_by":11,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ministry of Agriculture","funders":"Guizhou Academy of Agricultural Sciences; National Natural Science Foundation of China","keywords":"Biology; Camellia sinensis; Transcriptome; Gene; Herbivore; Genome; Botany; Abiotic stress; Abiotic component; Biotic stress; Genetics; Gene expression","score_opus":0.01184666495165751,"score_gpt":0.25090078991339,"score_spread":0.23905412496173248,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4393385451","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99345875,0.0020121615,0.0015586514,0.0002683667,0.00017150216,0.00027470168,0.002151859,0.00003163627,0.00007238584],"genre_scores_gemma":[0.99604416,0.000546819,0.00026431424,0.00022531216,0.000087877386,0.00004336818,0.002143839,0.000024251282,0.0006200865],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9978203,0.00048143094,0.00060663756,0.00065015495,0.00009996302,0.0003414784],"domain_scores_gemma":[0.99897623,0.00030165337,0.00008968395,0.00046600171,0.00005883502,0.00010757237],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00077894557,0.00024167808,0.00037155536,0.0003431025,0.000038085454,0.000025349353,0.0003425354,0.00027132576,0.000026988464],"category_scores_gemma":[0.0004152048,0.00019848258,0.00012646498,0.00032978892,0.00006349569,0.0000058718088,0.000098207885,0.00012040884,0.000056980934],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0013593609,0.000060236693,0.013037359,0.000048612645,0.00007208584,0.000023152448,0.00015270237,0.00024344362,0.98263264,0.000022837638,0.002088916,0.00025867406],"study_design_scores_gemma":[0.00031633518,0.00024498603,0.049341775,0.00010219378,0.000039019895,0.000099682155,0.00016862019,0.00028261982,0.90566885,0.00010967488,0.043285754,0.00034049517],"about_ca_topic_score_codex":0.00007613846,"about_ca_topic_score_gemma":0.00057998224,"teacher_disagreement_score":0.076963775,"about_ca_system_score_codex":0.00002947305,"about_ca_system_score_gemma":0.00015149177,"threshold_uncertainty_score":0.80938846},"labels":[],"label_agreement":null},{"id":"W4394012293","doi":"10.1186/s12870-024-04935-7","title":"Comparative secretome analysis of Striga and Cuscuta species identifies candidate virulence factors for two evolutionarily independent parasitic plant lineages","year":2024,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Plant Parasitism and Resistance","field":"Agricultural and Biological Sciences","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Biotechnology and Biological Sciences Research Council; Directorate for Biological Sciences; Leverhulme Trust; UK Research and Innovation","keywords":"Biology; Striga; Parasitic plant; Striga hermonthica; Cuscuta; Botany; Scrophulariaceae; Virulence; Host (biology); Obligate parasite; Oryza; Gene; Oryza sativa; Genetics","score_opus":0.04143154922703746,"score_gpt":0.2835343371759662,"score_spread":0.24210278794892875,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4394012293","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.96397495,0.0023853194,0.00018534818,0.000057919937,0.00022415082,0.00020879383,0.03286049,0.000043638673,0.000059410493],"genre_scores_gemma":[0.9939444,0.00040025555,0.00004131443,0.00001456483,0.0000878116,0.0000172941,0.0052051237,7.995399e-7,0.0002884016],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99875873,0.00010069071,0.0003140368,0.00042235103,0.000119829005,0.00028433508],"domain_scores_gemma":[0.99824846,0.0014723886,0.000111293666,0.00005392804,0.000038257906,0.000075648575],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00018662015,0.0001858731,0.0005063357,0.00009386215,0.00015150224,0.000058914808,0.00019335096,0.00011434505,0.000073804054],"category_scores_gemma":[0.000031208667,0.00007294755,0.00013742477,0.00037329894,0.00021278932,0.00009116856,0.000040712108,0.00009365197,0.000004359354],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00022003615,0.000056665387,0.26675287,0.00009147162,0.0007914871,0.000019800935,0.00037664504,0.00008743679,0.7254398,0.005196993,0.0008502076,0.00011656519],"study_design_scores_gemma":[0.00016351261,0.00022431112,0.96791506,0.000084021856,0.0004448736,0.00002805541,0.0008015132,0.0034304408,0.022214087,0.00045959398,0.003923985,0.0003105405],"about_ca_topic_score_codex":0.0006704186,"about_ca_topic_score_gemma":0.014719885,"teacher_disagreement_score":0.70322573,"about_ca_system_score_codex":0.000021329475,"about_ca_system_score_gemma":0.000024385865,"threshold_uncertainty_score":0.8214041},"labels":[],"label_agreement":null},{"id":"W4394854219","doi":"10.1186/s12870-024-04982-0","title":"OsCIPK2 mediated rice root microorganisms and metabolites to improve plant nitrogen uptake","year":2024,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Legume Nitrogen Fixing Symbiosis","field":"Agricultural and Biological Sciences","cited_by":13,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Institute of Genetics; Fujian Agriculture and Forestry University","keywords":"Biology; Rhizosphere; Nitrogen fixation; Nitrogen; Microorganism; Population; Botany; Bacteria; Microbial population biology; Nitrogen cycle; Nutrient; Agronomy; Chemistry; Ecology","score_opus":0.014445930674231491,"score_gpt":0.21491325109842707,"score_spread":0.20046732042419557,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4394854219","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.990208,0.003145694,0.00000409727,0.0009644758,0.0005273196,0.00028814067,0.0044585126,0.00026571285,0.0001380326],"genre_scores_gemma":[0.9972012,0.000046134905,0.00050771947,0.0005641445,0.00041969251,0.00003908607,0.0010780429,0.0000036419544,0.0001403608],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9982964,0.0001224452,0.00029707185,0.00065589615,0.000103142396,0.000525036],"domain_scores_gemma":[0.9989509,0.0006678169,0.0000505776,0.00007962743,0.000032351843,0.00021874097],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00030855296,0.000259596,0.0003323317,0.00004789099,0.00013323015,0.000107666485,0.00030466175,0.00023672491,0.00016774518],"category_scores_gemma":[0.00014349048,0.00009920167,0.000086624954,0.00038054233,0.000075645745,0.000072030954,0.00019002987,0.00016405992,0.0004110869],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000049218037,0.000023349065,0.008212712,0.000015752968,0.000053801363,0.000015336756,0.00007132867,1.3293525e-8,0.98778164,0.00086463493,0.0012477639,0.0016644222],"study_design_scores_gemma":[0.00023138367,0.00057000277,0.058553502,0.000039021,0.00010741839,0.00025795036,0.00014111635,0.000032244992,0.84884024,0.0019158162,0.088679,0.0006322934],"about_ca_topic_score_codex":0.00045930687,"about_ca_topic_score_gemma":0.0012375135,"teacher_disagreement_score":0.1389414,"about_ca_system_score_codex":0.000025850686,"about_ca_system_score_gemma":0.00002553398,"threshold_uncertainty_score":0.5283827},"labels":[],"label_agreement":null},{"id":"W4395684881","doi":"10.1186/s12870-024-05051-2","title":"Transcriptome profiles reveal response mechanisms and key role of PsNAC1 in Pinus sylvestris var. mongolica to drought stress","year":2024,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Plant Gene Expression Analysis","field":"Biochemistry, Genetics and Molecular Biology","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"Biology; Transcriptome; Gene; Transcription factor; Arabidopsis; Drought tolerance; Genetics; RNA-Seq; KEGG; Computational biology; Gene expression; Botany","score_opus":0.008990125456750347,"score_gpt":0.24739868523198857,"score_spread":0.23840855977523823,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4395684881","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9941538,0.001906131,0.0011167445,0.00022506752,0.00010280695,0.00023801003,0.0020416754,0.000023974488,0.00019178513],"genre_scores_gemma":[0.99554086,0.00030699503,0.0026314605,0.000108792796,0.00006196136,0.00005564875,0.00060871436,0.000019318913,0.000666229],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9983702,0.00032445393,0.00034589914,0.00056558487,0.00008665924,0.00030720836],"domain_scores_gemma":[0.9994248,0.00009235605,0.000054658616,0.00028066096,0.000025825813,0.0001216682],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000362903,0.00020284508,0.00033460223,0.00027445087,0.000028026128,0.000016674054,0.00023277814,0.00029493502,0.000023911549],"category_scores_gemma":[0.00009945736,0.00017163497,0.00008604488,0.00022249951,0.0000620756,0.0000044691255,0.00011958495,0.000115344556,0.000009206505],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0010974538,0.00004308336,0.0017791811,0.000045341938,0.00005777686,0.00002061228,0.00016881044,0.00002136764,0.9938159,0.00072063523,0.0017657817,0.00046407132],"study_design_scores_gemma":[0.00038021826,0.00049225416,0.0024786368,0.000117347285,0.000039773084,0.00010059925,0.00022381262,0.00036019896,0.9576874,0.00041896317,0.037414346,0.0002864549],"about_ca_topic_score_codex":0.00011286727,"about_ca_topic_score_gemma":0.00024415183,"teacher_disagreement_score":0.03612849,"about_ca_system_score_codex":0.000013832306,"about_ca_system_score_gemma":0.000111990965,"threshold_uncertainty_score":0.69990706},"labels":[],"label_agreement":null},{"id":"W4399049859","doi":"10.1186/s12870-024-04945-5","title":"A comparison between the role of enniatins and deoxynivalenol in Fusarium virulence on different tissues of common wheat","year":2024,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Mycotoxins in Agriculture and Food","field":"Agricultural and Biological Sciences","cited_by":10,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Agriculture and Agri-Food Canada","funders":"Ministero dell'Università e della Ricerca","keywords":"Biology; Virulence; Fusarium; Mycotoxin; Strain (injury); Botany; Genetics; Gene","score_opus":0.03156969019518655,"score_gpt":0.26820653400897565,"score_spread":0.2366368438137891,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4399049859","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9958563,0.0026882128,0.0000012131404,0.00017632547,0.00005766035,0.00016306965,0.00045675316,0.000016854925,0.0005836166],"genre_scores_gemma":[0.9994684,0.00024547425,0.000013134367,0.000017852924,0.00009679531,0.000009072007,0.00013348884,4.9531707e-7,0.000015299582],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99920696,0.00013342476,0.0002559283,0.00018750275,0.000068894784,0.0001472883],"domain_scores_gemma":[0.99904686,0.000806566,0.00006503208,0.000046510388,0.000009162143,0.00002583907],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012642698,0.00010823153,0.0002953298,0.00001665969,0.000034035194,0.000009988747,0.00019007605,0.00011755574,0.000026508234],"category_scores_gemma":[0.000014238438,0.000029118159,0.000041187694,0.000121080586,0.00008841074,0.000016851847,0.00006973129,0.00013707213,0.000003908236],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000324831,0.0000796916,0.60960835,0.000025096557,0.000014103778,6.7777455e-7,0.00027179634,7.41291e-7,0.36528438,0.0027849574,0.0000663779,0.021831345],"study_design_scores_gemma":[0.000067116576,0.00081616367,0.8683686,0.00009861002,0.000015881586,0.0000047828835,0.00031721973,0.00010648419,0.12125579,0.0014801004,0.007366979,0.0001022266],"about_ca_topic_score_codex":0.00033924397,"about_ca_topic_score_gemma":0.0015498534,"teacher_disagreement_score":0.25876027,"about_ca_system_score_codex":0.000006982393,"about_ca_system_score_gemma":0.000002746092,"threshold_uncertainty_score":0.1187404},"labels":[],"label_agreement":null},{"id":"W4399052618","doi":"10.1186/s12870-024-05176-4","title":"Comprehensive genome-wide analysis of wheat xylanase inhibitor protein (XIP) genes: unveiling their role in Fusarium head blight resistance and plant immune mechanisms","year":2024,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Plant-Microbe Interactions and Immunity","field":"Agricultural and Biological Sciences","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ministry of Agriculture","funders":"Jiangsu Collaborative Innovation Center for Modern Crop Production","keywords":"Biology; Jasmonic acid; Gene; Plant disease resistance; Gene family; Fusarium; Genetics; Ustilago; Comparative genomics; Functional genomics; Genome; Genomics; Botany","score_opus":0.021789839817889265,"score_gpt":0.22413772163126577,"score_spread":0.2023478818133765,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4399052618","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9893092,0.006251486,0.000044845714,0.00018724603,0.0001300751,0.00026509014,0.0036687893,0.00004246135,0.00010081223],"genre_scores_gemma":[0.9971824,0.00040438387,0.00018978617,0.000047689282,0.000047431295,0.000025384117,0.0019970797,0.0000016801298,0.00010415149],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.998551,0.00023081705,0.00044700058,0.00039244763,0.00007333111,0.00030542206],"domain_scores_gemma":[0.99911165,0.00056762627,0.000106578875,0.000099335964,0.000057896028,0.000056919096],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00026821607,0.00020626023,0.00049068034,0.00016635795,0.00011756736,0.00004651343,0.0002019917,0.00016644472,0.00006986919],"category_scores_gemma":[0.000029244153,0.00008714196,0.00012999054,0.0006344656,0.00008129282,0.00008136,0.00011288788,0.00021419882,0.000007787559],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00020034642,0.00006185927,0.0038413769,0.00003833677,0.00015378743,0.0000151001495,0.000118785836,0.000013675822,0.9947386,0.00030349413,0.00001702293,0.0004976357],"study_design_scores_gemma":[0.0004148552,0.00056210766,0.19606635,0.00036562045,0.00020035675,0.000091240305,0.002338056,0.0023863947,0.74810636,0.0010794667,0.047705512,0.0006836612],"about_ca_topic_score_codex":0.002132438,"about_ca_topic_score_gemma":0.021664497,"teacher_disagreement_score":0.2466322,"about_ca_system_score_codex":0.00004620069,"about_ca_system_score_gemma":0.00002841203,"threshold_uncertainty_score":0.99618757},"labels":[],"label_agreement":null},{"id":"W4399293255","doi":"10.1186/s12870-024-05191-5","title":"Potential distribution and ecological impacts of Acmella radicans (Jacquin) R.K. Jansen (a new Yunnan invasive species record) in China","year":2024,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Herbal Medicine Research Studies","field":"Medicine","cited_by":17,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Trinity Western University; Western University","funders":"","keywords":"Biology; Ecology; Population; Weed; Species richness; Species evenness; China; Geography; Demography","score_opus":0.02926428190656257,"score_gpt":0.3081819224658816,"score_spread":0.27891764055931906,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4399293255","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99122775,0.003010839,0.00022561642,0.0040325,0.0002478388,0.00038977058,0.00033693778,0.000035345507,0.00049338466],"genre_scores_gemma":[0.9935118,0.005179569,0.00016557056,0.00005860239,0.00035568714,0.000008206533,0.00037909838,0.000007228543,0.0003342513],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9986998,0.00015332803,0.00031620057,0.00030486006,0.00013046937,0.00039536157],"domain_scores_gemma":[0.99902457,0.0005703602,0.000045680685,0.00012168196,0.000025965708,0.00021171402],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003515319,0.00015268532,0.00050384784,0.0001632058,0.00003096559,0.000008228871,0.000078217934,0.00017400764,0.00016278164],"category_scores_gemma":[0.0016122892,0.000098203396,0.00006021309,0.00023114136,0.0003638668,0.000032496573,0.000113907125,0.00029091665,0.000013688589],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0015301274,0.00025056343,0.74774235,0.001100207,0.0002914631,0.0013832283,0.00094580057,0.0000020280236,0.19447169,0.0024730973,0.0379026,0.011906857],"study_design_scores_gemma":[0.0014214662,0.0021660195,0.9797268,0.0005219008,0.00006776234,0.0004497938,0.0003320005,0.00016729531,0.0029592135,0.0006397134,0.0114183165,0.00012970495],"about_ca_topic_score_codex":0.001041637,"about_ca_topic_score_gemma":0.0014770734,"teacher_disagreement_score":0.23198448,"about_ca_system_score_codex":0.00010658841,"about_ca_system_score_gemma":0.00044836922,"threshold_uncertainty_score":0.40046185},"labels":[],"label_agreement":null},{"id":"W4399462099","doi":"10.1186/s12870-024-05218-x","title":"High-yield hybrid breeding of Camellia oleifolia based on ISSR molecular markers","year":2024,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Lipid metabolism and biosynthesis","field":"Biochemistry, Genetics and Molecular Biology","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"Biology; Molecular breeding; Yield (engineering); Biotechnology; Molecular marker; Computational biology; Genetics; Gene","score_opus":0.011242644007338178,"score_gpt":0.22215661656929386,"score_spread":0.21091397256195568,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4399462099","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.991446,0.0016017612,0.0039495914,0.00012451882,0.0010942623,0.00016496706,0.0006498886,0.00004186641,0.0009271283],"genre_scores_gemma":[0.9967666,0.00011358932,0.0015805633,0.00035001893,0.000389393,0.000013586601,0.0005387771,0.000025813431,0.00022162484],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9987235,0.000090533395,0.00027670152,0.0004923544,0.000098299766,0.00031858304],"domain_scores_gemma":[0.99936867,0.000107021275,0.00006753067,0.00034578744,0.000030611292,0.00008035868],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00026880068,0.00022299719,0.000273495,0.00012885264,0.000036555466,0.000016344735,0.0002480264,0.0002186461,0.00007298312],"category_scores_gemma":[0.00013728322,0.00017733176,0.00016119322,0.00009163036,0.00010204539,0.0000025014435,0.000071105205,0.000107576874,0.000037437465],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00028668722,0.000046174635,0.0010309594,0.00010005811,0.00007667734,0.000018209896,0.000004911413,0.00006616832,0.9908209,0.0010167467,0.0040410445,0.0024914641],"study_design_scores_gemma":[0.00021473595,0.00033660713,0.000543261,0.000083352556,0.000048564456,0.00001869087,0.000010973063,0.0004032525,0.9369848,0.000045977733,0.061081965,0.00022785153],"about_ca_topic_score_codex":0.00006255286,"about_ca_topic_score_gemma":0.000018079694,"teacher_disagreement_score":0.05704092,"about_ca_system_score_codex":0.000008772,"about_ca_system_score_gemma":0.0001293486,"threshold_uncertainty_score":0.7231379},"labels":[],"label_agreement":null},{"id":"W4399709072","doi":"10.1186/s12870-024-05183-5","title":"Multi-trait association mapping for phosphorous efficiency reveals flexible root architectures in sorghum","year":2024,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Plant nutrient uptake and metabolism","field":"Agricultural and Biological Sciences","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Global Institute for Water Security; University of Saskatchewan","funders":"Consortium of International Agricultural Research Centers; Fundação de Amparo à Pesquisa do Estado de Minas Gerais; Embrapa Mandioca e Fruticultura; Conselho Nacional de Desenvolvimento Científico e Tecnológico","keywords":"Biology; Sorghum; Hydroponics; Agronomy; Trait; Root system; Association mapping; Crop; Phosphorus; Botany; Genotype; Gene; Single-nucleotide polymorphism; Materials science; Genetics","score_opus":0.038455619453445875,"score_gpt":0.25496786335266325,"score_spread":0.21651224389921736,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4399709072","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9915184,0.0048192544,0.00032198417,0.00039344252,0.0007131975,0.00044880554,0.0014515249,0.00015663353,0.0001767812],"genre_scores_gemma":[0.99637896,0.00020404505,0.0006815754,0.00018738754,0.00040118067,0.00008381265,0.0008009841,0.0000016973821,0.0012603394],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.99861693,0.00009849818,0.00029258907,0.0004094368,0.00008576021,0.000496787],"domain_scores_gemma":[0.9990916,0.0007139136,0.00007713564,0.000038470444,0.000021935508,0.000056929544],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006210585,0.00015757741,0.0002678302,0.00005483206,0.00010110732,0.000047278765,0.00020353404,0.0002277627,0.000040048555],"category_scores_gemma":[0.00020555283,0.00006422458,0.000115214294,0.00030517473,0.000022218355,0.00003308765,0.00003758377,0.00015527528,0.00002859732],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001085788,0.00015727869,0.09536821,0.000048425933,0.000024251729,0.000011283997,0.0002670349,0.000030288227,0.8586992,0.002632607,0.00301927,0.039633572],"study_design_scores_gemma":[0.00054592337,0.00023798147,0.43261847,0.000119433724,0.000022735336,0.0000354377,0.000104895444,0.0011776169,0.0078092203,0.0029746206,0.5539457,0.00040794504],"about_ca_topic_score_codex":0.00021555602,"about_ca_topic_score_gemma":0.0021029685,"teacher_disagreement_score":0.85089,"about_ca_system_score_codex":0.000048386446,"about_ca_system_score_gemma":0.0000198372,"threshold_uncertainty_score":0.26190025},"labels":[],"label_agreement":null},{"id":"W4400056196","doi":"10.1186/s12870-024-05171-9","title":"The cacao gene atlas: a transcriptome developmental atlas reveals highly tissue-specific and dynamically-regulated gene networks in Theobroma cacao L","year":2024,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Cocoa and Sweet Potato Agronomy","field":"Agricultural and Biological Sciences","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Agricultural Research Service; National Institute of Food and Agriculture; University of Toronto; U.S. Department of Agriculture","keywords":"Biology; Theobroma; Transcriptome; Computational biology; Gene; Gene expression profiling; Genomics; Functional genomics; Genetics; Biotechnology; Gene expression; Genome; Botany","score_opus":0.015367219176480701,"score_gpt":0.2074992884041873,"score_spread":0.1921320692277066,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4400056196","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9913493,0.006696139,0.000046086647,0.00076901243,0.00034918726,0.00040692964,0.00008816463,0.00009873966,0.00019648306],"genre_scores_gemma":[0.99699736,0.0013552449,0.00019723577,0.00007530729,0.00024221312,0.00005715813,0.0006018517,0.0000030433296,0.0004706112],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.998081,0.0002239383,0.0004343677,0.00057315844,0.000092452305,0.0005950776],"domain_scores_gemma":[0.9990792,0.0006573204,0.000051754432,0.00006879805,0.00001915797,0.00012374374],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00038507738,0.0002671444,0.000320867,0.000030263329,0.00024848286,0.00012326015,0.0003257071,0.00027323407,0.000083128776],"category_scores_gemma":[0.000012316671,0.00009418913,0.000074422605,0.00033711432,0.00019611113,0.00006459191,0.00009807099,0.00023924201,0.000043386426],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00020843661,0.000045002987,0.014432264,0.0000122941265,0.000050332685,0.00008352439,0.00033297823,0.000014445987,0.9419753,0.0028373345,0.0013372337,0.03867088],"study_design_scores_gemma":[0.0007033517,0.0005487135,0.64811105,0.00013152722,0.00003575037,0.00081238843,0.00043093698,0.0030814682,0.007254764,0.002054444,0.33584368,0.0009919092],"about_ca_topic_score_codex":0.00036515566,"about_ca_topic_score_gemma":0.004766273,"teacher_disagreement_score":0.9347205,"about_ca_system_score_codex":0.00007041706,"about_ca_system_score_gemma":0.000025234876,"threshold_uncertainty_score":0.3840921},"labels":[],"label_agreement":null},{"id":"W4400388340","doi":"10.1186/s12870-024-05337-5","title":"Differential gene expression of salt-tolerant alfalfa in response to salinity and inoculation by Ensifer meliloti","year":2024,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Plant Stress Responses and Tolerance","field":"Agricultural and Biological Sciences","cited_by":11,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"Natural Environment Research Council; Beef Cattle Research Council","keywords":"Biology; Salinity; Inoculation; Rhizobium; Gene; Gene silencing; Botany; Horticulture; Genetics; Ecology","score_opus":0.02280861862000648,"score_gpt":0.2439061292419735,"score_spread":0.22109751062196703,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4400388340","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9967414,0.0006784495,0.000062015184,0.00037468795,0.0001516048,0.00016010151,0.0017899458,0.000030651197,0.000011135104],"genre_scores_gemma":[0.99914265,0.0001462252,0.00013096273,0.00006311103,0.00006589849,0.000011162622,0.0003831653,0.0000010124031,0.00005583508],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99883014,0.00031934283,0.00025043258,0.00031666586,0.000079800484,0.0002035983],"domain_scores_gemma":[0.99904805,0.00077937683,0.000041473304,0.000044401462,0.000014288524,0.0000723824],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00019176875,0.00012452016,0.00022615849,0.000040079896,0.000045247336,0.000020464677,0.00009931693,0.000139122,0.000071146846],"category_scores_gemma":[0.00007320191,0.000049706978,0.00003822257,0.00013819065,0.00004189898,0.000040913194,0.000073176125,0.00009200202,0.000007889563],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0017752204,0.000034099266,0.029540686,0.00001174075,0.0000036568033,0.000008077559,0.000055318076,0.000004248216,0.9652274,0.000049430113,0.00024743038,0.0030426742],"study_design_scores_gemma":[0.0003264193,0.00043071888,0.75724036,0.0001656096,0.000008221105,0.000036944635,0.000029872572,0.00078135025,0.22771792,0.00018551854,0.012833599,0.00024347697],"about_ca_topic_score_codex":0.00033526245,"about_ca_topic_score_gemma":0.00045228837,"teacher_disagreement_score":0.7375095,"about_ca_system_score_codex":0.000010755798,"about_ca_system_score_gemma":0.000010408058,"threshold_uncertainty_score":0.20269917},"labels":[],"label_agreement":null},{"id":"W4400989878","doi":"10.1186/s12870-024-05429-2","title":"TaSPL6B, a member of the Squamosa promoter binding protein-like family, regulates shoot branching and florescence in Arabidopsis thaliana","year":2024,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Plant Molecular Biology Research","field":"Agricultural and Biological Sciences","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ministry of Agriculture","funders":"National Natural Science Foundation of China","keywords":"Biology; Transcription factor; Arabidopsis thaliana; Arabidopsis; Botany; Shoot; DNA-binding protein; Cell biology; Genetics; Gene; Mutant","score_opus":0.03280665053022293,"score_gpt":0.2507215435605612,"score_spread":0.21791489303033829,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4400989878","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.997486,0.000835744,0.0000024850174,0.0005689873,0.00014775885,0.00047608037,0.00031049375,0.00003377962,0.00013868001],"genre_scores_gemma":[0.99938774,0.000051670206,0.00009960134,0.00004984136,0.00005489008,0.000035471094,0.00011002823,0.0000015720701,0.000209169],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9984313,0.0003664414,0.00024861348,0.00044880554,0.00011134992,0.0003934555],"domain_scores_gemma":[0.99948406,0.00030819856,0.000052864183,0.00008692338,0.000016745336,0.00005117707],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00053333084,0.00016135602,0.00023843105,0.000044553286,0.00009082375,0.000034994962,0.00034226393,0.00021761168,0.000033765955],"category_scores_gemma":[0.00009599306,0.000052824667,0.000072130155,0.00038751043,0.0002477878,0.000051591902,0.00024111912,0.0002694058,0.000012337336],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00004303793,0.000019753243,0.083860315,0.0000420636,0.000013950085,0.000018635508,0.000051145642,6.6945955e-7,0.9128954,0.00034777756,0.00008770347,0.0026195801],"study_design_scores_gemma":[0.0005835925,0.0007432602,0.6779298,0.001434978,0.000042392785,0.00067932886,0.00039348117,0.0023119163,0.30201128,0.0028036677,0.010156999,0.00090926624],"about_ca_topic_score_codex":0.0004183895,"about_ca_topic_score_gemma":0.0019700953,"teacher_disagreement_score":0.6108841,"about_ca_system_score_codex":0.000017723358,"about_ca_system_score_gemma":0.000026987896,"threshold_uncertainty_score":0.21541274},"labels":[],"label_agreement":null},{"id":"W4401301215","doi":"10.1186/s12870-024-05454-1","title":"Allelic variability in the Rpp1 locus conferring resistance to Asian soybean rust revealed by genome-wide association","year":2024,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Yeasts and Rust Fungi Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"Conselho Nacional de Desenvolvimento Científico e Tecnológico; Ministério da Ciência, Tecnologia e Inovação; Coordenação de Aperfeiçoamento de Pessoal de Nível Superior","keywords":"Phakopsora pachyrhizi; Biology; Locus (genetics); Genetics; Haplotype; Single-nucleotide polymorphism; Allele; Genome-wide association study; Soybean rust; Gene; Horticulture; Genotype","score_opus":0.010253912566463696,"score_gpt":0.23745123670611518,"score_spread":0.2271973241396515,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4401301215","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9619496,0.007097145,0.003603422,0.009213334,0.0007197373,0.00094467273,0.0012065822,0.00006489222,0.015200643],"genre_scores_gemma":[0.99597234,0.00026312485,0.00019575418,0.0009369579,0.00023187314,0.000055716202,0.000499353,0.000011536602,0.0018333751],"study_design_codex":"observational","study_design_gemma":"not_applicable","domain_scores_codex":[0.9986199,0.0003246632,0.00023784509,0.0004215775,0.000073116804,0.0003228802],"domain_scores_gemma":[0.9994033,0.00023382623,0.000049543025,0.0002420319,0.000029993013,0.000041309726],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010835077,0.00014748803,0.0001827493,0.00003938006,0.000082372484,0.000031975593,0.00021843966,0.0001973565,0.000020310255],"category_scores_gemma":[0.00056062214,0.00010189622,0.00006162631,0.00010825101,0.000035804966,0.0000022015793,0.00009308364,0.00013792519,0.000031661548],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00036310713,0.00016269462,0.4718547,0.00021603334,0.00031345716,0.000029902607,0.0010963833,0.000017885199,0.3444563,0.0035770368,0.17675816,0.0011543843],"study_design_scores_gemma":[0.00027364356,0.00012676748,0.062260207,0.00003441463,0.000025291378,0.000007035585,0.00021908713,0.000010598684,0.0019567632,0.000361086,0.9344501,0.00027502445],"about_ca_topic_score_codex":0.00005426494,"about_ca_topic_score_gemma":0.0017818195,"teacher_disagreement_score":0.7576919,"about_ca_system_score_codex":0.0000631075,"about_ca_system_score_gemma":0.00006470852,"threshold_uncertainty_score":0.41552073},"labels":[],"label_agreement":null},{"id":"W4401844462","doi":"10.1186/s12870-024-05446-1","title":"Improved pokeweed genome assembly and early gene expression changes in response to jasmonic acid","year":2024,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Insect-Plant Interactions and Control","field":"Agricultural and Biological Sciences","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"York University","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Biology; Gene; Jasmonic acid; Genetics; Genome; Transcriptome; Arabidopsis; Transcription factor; Gene expression","score_opus":0.019131455693681982,"score_gpt":0.23306357380217446,"score_spread":0.21393211810849247,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4401844462","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9971614,0.0008029325,0.00001355341,0.00109967,0.00024577425,0.00022015705,0.00034300264,0.00005921813,0.000054279975],"genre_scores_gemma":[0.9989644,0.00007559019,0.00010311725,0.00020172916,0.00016929221,0.00006289785,0.000087017885,0.0000011266274,0.00033482598],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99903905,0.00016330664,0.00014608381,0.0003325587,0.000039204286,0.0002798044],"domain_scores_gemma":[0.9994749,0.00036929303,0.000026755553,0.000043889155,0.000014408086,0.000070781585],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00027961982,0.00012276378,0.00016832341,0.00006000392,0.00007394547,0.000063232976,0.000121243764,0.00013537261,0.000079013385],"category_scores_gemma":[0.0000422028,0.000047001522,0.000033936623,0.00015169376,0.000017143115,0.000048479757,0.000066557695,0.00011877965,0.000040301416],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00082052435,0.00001565343,0.001500215,0.0000037394107,0.00000534694,0.00001796838,0.00008705141,2.5793912e-7,0.99287057,0.00003675458,0.00004566855,0.0045962436],"study_design_scores_gemma":[0.0004959269,0.0028994859,0.50784516,0.00012722598,0.00001735798,0.00029782995,0.00027567553,0.00042985374,0.40072924,0.00012795336,0.086178906,0.0005753733],"about_ca_topic_score_codex":0.00054639165,"about_ca_topic_score_gemma":0.0037511333,"teacher_disagreement_score":0.59214133,"about_ca_system_score_codex":0.000024591318,"about_ca_system_score_gemma":0.000012483508,"threshold_uncertainty_score":0.20932205},"labels":[],"label_agreement":null},{"id":"W4401960641","doi":"10.1186/s12870-024-05532-4","title":"Revealing cis- and trans-regulatory elements underlying nuclear distribution and function of the Arabidopsis histone H2B.8 variant","year":2024,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Plant Molecular Biology Research","field":"Agricultural and Biological Sciences","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université du Québec à Trois-Rivières","funders":"Israel Science Foundation","keywords":"Biology; Histone H2B; Arabidopsis; Green fluorescent protein; Chromatin; Nuclear protein; Cell biology; Gene isoform; Heterochromatin; Genetics; Gene; Transcription factor; Mutant","score_opus":0.03816506204226462,"score_gpt":0.25969501109041004,"score_spread":0.22152994904814544,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4401960641","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99717855,0.001225317,0.00013484749,0.0004696877,0.00015072252,0.00015457084,0.0006156622,0.00002926873,0.000041341045],"genre_scores_gemma":[0.99928415,0.00019084717,0.00003180251,0.00005397032,0.00003854549,0.0000047065673,0.00035537448,9.33675e-7,0.000039699597],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99909353,0.00019767624,0.00017511442,0.00026935872,0.00007053669,0.00019377901],"domain_scores_gemma":[0.99965566,0.00019911677,0.00004375526,0.000044934994,0.000015410977,0.000041090745],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00038184278,0.00009242427,0.00013614273,0.000013155634,0.00015473444,0.00001881939,0.00010346162,0.00014443937,0.000030940104],"category_scores_gemma":[0.00003549627,0.000033593788,0.00004251704,0.00012778385,0.00018077306,0.000030487847,0.000068442576,0.00012545532,0.0000024402295],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008889373,0.000014015281,0.009021537,0.000033556364,0.000033150976,0.0000040933646,0.000024593295,5.008453e-7,0.9721244,0.0034360683,0.0002086786,0.015010504],"study_design_scores_gemma":[0.0003744464,0.0007650547,0.9462043,0.00018944911,0.00011098265,0.00039266294,0.0001938514,0.0015990632,0.0056495555,0.0026487447,0.041531812,0.0003400957],"about_ca_topic_score_codex":0.00009342481,"about_ca_topic_score_gemma":0.00021969342,"teacher_disagreement_score":0.96647483,"about_ca_system_score_codex":0.000020533107,"about_ca_system_score_gemma":0.0000116142955,"threshold_uncertainty_score":0.13699149},"labels":[],"label_agreement":null},{"id":"W4402317652","doi":"10.1186/s12870-024-05392-y","title":"Genome-wide analysis of the passion fruit invertase gene family reveals involvement of PeCWINV5 in hexose accumulation","year":2024,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Plant nutrient uptake and metabolism","field":"Agricultural and Biological Sciences","cited_by":12,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ministry of Agriculture","funders":"Guangxi Key Research and Development Program; National Natural Science Foundation of China","keywords":"Biology; Invertase; Gene; Hexose; Genome; Genetics; Gene family; Passion; Botany; Enzyme; Biochemistry","score_opus":0.0682375994260982,"score_gpt":0.2648517728845066,"score_spread":0.19661417345840843,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4402317652","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99576473,0.0023270398,0.000011136587,0.00020887391,0.00018390502,0.00019731752,0.0012366893,0.000014556103,0.000055752513],"genre_scores_gemma":[0.99713355,0.0011281774,0.000034059743,0.00022898105,0.000055424196,0.000010232714,0.0013376094,6.1197704e-7,0.00007136064],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99883914,0.00019279856,0.00040970978,0.0002520482,0.00011642095,0.00018990885],"domain_scores_gemma":[0.99931705,0.0003973998,0.00013370378,0.0000838973,0.000028703827,0.000039273727],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00039841715,0.000109999586,0.0003286196,0.00009477613,0.00003641074,0.000008136252,0.00022904148,0.0001233096,0.000051585328],"category_scores_gemma":[0.00006317078,0.00003603298,0.00017731368,0.0010346713,0.000049104365,0.000042954995,0.00008890441,0.0000800575,0.000004618542],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00003635139,0.00004637144,0.28519076,0.000010086436,0.00006439135,0.0000018110389,0.00006384627,0.000045465513,0.71154416,0.0005675237,0.00012766053,0.0023015789],"study_design_scores_gemma":[0.00008583565,0.000051684154,0.9642883,0.000031615105,0.00011294972,8.017412e-7,0.000059846094,0.00044938282,0.015941633,0.0004276633,0.018467123,0.00008316204],"about_ca_topic_score_codex":0.00056197046,"about_ca_topic_score_gemma":0.0020121739,"teacher_disagreement_score":0.69560254,"about_ca_system_score_codex":0.000015168532,"about_ca_system_score_gemma":0.000017781154,"threshold_uncertainty_score":0.14693823},"labels":[],"label_agreement":null},{"id":"W4402390002","doi":"10.1186/s12870-024-05551-1","title":"Effects of cadmium stress on the growth and physiological characteristics of sweet potato","year":2024,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Plant Stress Responses and Tolerance","field":"Agricultural and Biological Sciences","cited_by":32,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ministry of Agriculture","funders":"Guizhou University","keywords":"Biology; Cadmium; Botany; Horticulture","score_opus":0.021260773707111356,"score_gpt":0.2212770605448803,"score_spread":0.20001628683776895,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4402390002","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99730223,0.0005200954,0.0000032214696,0.00021867004,0.00011980698,0.0001162441,0.0016346783,0.000017889306,0.00006714047],"genre_scores_gemma":[0.99915266,0.0005357059,0.000008398306,0.00007337664,0.000088866575,0.0000084100575,0.000115926305,4.782152e-7,0.000016168056],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9993526,0.00011708418,0.00015179961,0.00018199993,0.000052220195,0.00014431629],"domain_scores_gemma":[0.99775475,0.0021107644,0.00006159676,0.000029886514,0.000012129859,0.00003087624],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000067001114,0.00009895154,0.00021324567,0.000009785468,0.000039666094,0.000008811587,0.0001336682,0.00009031127,0.000023709907],"category_scores_gemma":[0.00011284715,0.000026677224,0.000049712726,0.00008009193,0.0001315225,0.00001269895,0.000048728147,0.000088064786,0.0000039988054],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00022486612,0.000055381683,0.009493396,0.0001421522,0.000020276768,0.000016028805,0.000023952563,2.0800914e-7,0.9729368,0.014168403,0.00018139438,0.002737144],"study_design_scores_gemma":[0.000082517276,0.0007657313,0.86952245,0.00020816848,0.000016805712,0.000022141041,0.000022342678,0.0001228295,0.12709568,0.0007099529,0.0013096045,0.0001217647],"about_ca_topic_score_codex":0.000085513384,"about_ca_topic_score_gemma":0.000029211309,"teacher_disagreement_score":0.86002904,"about_ca_system_score_codex":0.000001913182,"about_ca_system_score_gemma":0.0000057207553,"threshold_uncertainty_score":0.10878656},"labels":[],"label_agreement":null},{"id":"W4402452718","doi":"10.1186/s12870-024-05536-0","title":"QTL analysis of native Fusarium head blight and deoxynivalenol resistance in ‘D8006W’/’Superior’, soft white winter wheat population","year":2024,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Mycotoxins in Agriculture and Food","field":"Agricultural and Biological Sciences","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph; University of Manitoba; Agriculture and Agri-Food Canada","funders":"Agriculture and Agri-Food Canada; Universität Hohenheim","keywords":"Biology; Fusarium; Quantitative trait locus; Population; White (mutation); Resistance (ecology); Winter wheat; Agronomy; Horticulture; Genetics; Demography","score_opus":0.01980307164750715,"score_gpt":0.24281996349182106,"score_spread":0.2230168918443139,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4402452718","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99536276,0.002046175,0.000019839801,0.0004370591,0.0001319837,0.00015736483,0.00071619265,0.00004007094,0.0010885791],"genre_scores_gemma":[0.99822026,0.00012784885,0.00013999481,0.00007061229,0.00009877051,0.000013641738,0.0009220977,8.255755e-7,0.0004059358],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9988659,0.0001314128,0.00030598306,0.00039664973,0.00008327929,0.00021677975],"domain_scores_gemma":[0.9995361,0.00027989142,0.00005833638,0.000051246312,0.000030805048,0.000043646996],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001895036,0.00014904143,0.0003575328,0.00010318825,0.00004984311,0.00002979647,0.00013265392,0.00018934249,0.00015001172],"category_scores_gemma":[0.00003274541,0.000053730335,0.00010708298,0.00087949913,0.00006208734,0.00008250867,0.000052062576,0.00012253624,0.000005326087],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00019627882,0.000077309276,0.7661574,0.00006189496,0.0002402738,0.000014032516,0.00073609984,0.000008489044,0.22430687,0.004939564,0.00060787995,0.0026539313],"study_design_scores_gemma":[0.00010607628,0.00018355067,0.9851997,0.000073783325,0.00011918064,0.00000872196,0.00019503305,0.0002509183,0.0019262898,0.00065822137,0.011070923,0.00020759302],"about_ca_topic_score_codex":0.00022849861,"about_ca_topic_score_gemma":0.032615226,"teacher_disagreement_score":0.22238058,"about_ca_system_score_codex":0.000025601106,"about_ca_system_score_gemma":0.0000055817723,"threshold_uncertainty_score":0.985037},"labels":[],"label_agreement":null},{"id":"W4403002873","doi":"10.1186/s12870-024-05604-5","title":"Integrative approaches to improve litchi (Litchi chinensis Sonn.) plant health using bio-transformations and entomopathogenic fungi","year":2024,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Plant Pathogens and Fungal Diseases","field":"Biochemistry, Genetics and Molecular Biology","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Centre for Global Health Research","funders":"King Saud University","keywords":"Biology; Entomopathogenic fungi; Botany; Biotechnology; Biological pest control","score_opus":0.04940051964802227,"score_gpt":0.26592170714034413,"score_spread":0.21652118749232185,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4403002873","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.91873246,0.017625384,0.020513903,0.0002639896,0.00051186973,0.00064306625,0.041437652,0.00007500559,0.00019665892],"genre_scores_gemma":[0.98895144,0.0011772643,0.0029601213,0.00037214078,0.00031177225,0.000053097036,0.0060629733,0.000028387787,0.000082813785],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99829954,0.00015543775,0.00038030947,0.00062705023,0.00007684431,0.00046079303],"domain_scores_gemma":[0.9993555,0.00006296196,0.00006915286,0.00022781867,0.000021373753,0.00026321018],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002656575,0.0003098861,0.0003468005,0.00017354362,0.00015718745,0.00006382014,0.00015036252,0.00019951843,0.000007730475],"category_scores_gemma":[0.000051838088,0.00023297068,0.00013786902,0.0001509218,0.00007356416,0.000010461681,0.00011057051,0.00014614027,0.000016195832],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00023153813,0.00007627306,0.0054512527,0.00018581506,0.00014721951,0.000011568461,0.00051862403,0.00003317953,0.9831109,0.002657024,0.00075975165,0.006816871],"study_design_scores_gemma":[0.0055174497,0.012848421,0.071069464,0.0023025512,0.0014614756,0.0067075244,0.0069196713,0.121654056,0.4218363,0.0036720748,0.33759633,0.008414691],"about_ca_topic_score_codex":0.00008128943,"about_ca_topic_score_gemma":0.00046368298,"teacher_disagreement_score":0.5612746,"about_ca_system_score_codex":0.00003079934,"about_ca_system_score_gemma":0.0002710522,"threshold_uncertainty_score":0.95002687},"labels":[],"label_agreement":null},{"id":"W4403046379","doi":"10.1186/s12870-024-05633-0","title":"A chromosome level reference genome of Diviner’s sage (Salvia divinorum) provides insight into salvinorin A biosynthesis","year":2024,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Plant biochemistry and biosynthesis","field":"Biochemistry, Genetics and Molecular Biology","cited_by":9,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"St. Michael's Hospital; University of Calgary; College of Family Physicians of Canada; University of Toronto","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Biology; Genome; Genetics; Gene; Expressed sequence tag","score_opus":0.03274299257176381,"score_gpt":0.250153374411931,"score_spread":0.21741038184016717,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4403046379","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98436314,0.008878462,0.0005617056,0.00014939399,0.00028851355,0.0002889278,0.0042254287,0.000090566115,0.0011538713],"genre_scores_gemma":[0.99319607,0.002087365,0.0010679256,0.000065889086,0.00036528189,0.000054046817,0.0021136121,0.000034645673,0.0010151452],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99770564,0.00017952922,0.0005183652,0.0009148041,0.00014465062,0.0005370089],"domain_scores_gemma":[0.9988271,0.0002542075,0.00014803385,0.0005673934,0.000054446584,0.00014883128],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00033537342,0.0004292082,0.00048729673,0.00015444004,0.000096992735,0.00004175752,0.00060458714,0.0005730318,0.000078409634],"category_scores_gemma":[0.00031994784,0.0003394953,0.00021652669,0.00022722811,0.0003097367,0.000011504623,0.0003807487,0.00019346383,0.00005569775],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00019397328,0.0001007118,0.005486889,0.0003920319,0.00019409439,0.000020264644,0.0000781526,0.0000010503192,0.98835266,0.0002390313,0.0003262323,0.0046149096],"study_design_scores_gemma":[0.00015976567,0.00032245973,0.0051682508,0.00015806955,0.00007252819,0.00006661261,0.00003897633,0.0000362341,0.8936344,0.00009469512,0.09976471,0.000483298],"about_ca_topic_score_codex":0.00014134757,"about_ca_topic_score_gemma":0.0003071727,"teacher_disagreement_score":0.09943848,"about_ca_system_score_codex":0.00003510804,"about_ca_system_score_gemma":0.00027839842,"threshold_uncertainty_score":0.9999057},"labels":[],"label_agreement":null},{"id":"W4403257469","doi":"10.1186/s12870-024-05621-4","title":"Identification of key gene networks controlling organic acid and sugar metabolism during star fruit (Averrhoa carambola) development","year":2024,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Postharvest Quality and Shelf Life Management","field":"Agricultural and Biological Sciences","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canadian Forest Service; University of British Columbia","funders":"Fujian Agriculture and Forestry University","keywords":"Averrhoa carambola; Biology; Sugar; Identification (biology); Key (lock); Gene; Metabolism; Botany; Carbohydrate metabolism; Genetics; Biochemistry; Ecology","score_opus":0.02483074541263451,"score_gpt":0.22129479375217806,"score_spread":0.19646404833954356,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4403257469","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99473524,0.0039201784,0.0004773993,0.00019262996,0.00028215887,0.00018848316,0.00012337157,0.000062961175,0.000017578259],"genre_scores_gemma":[0.998737,0.00043538428,0.0001580603,0.000051014507,0.00017310868,0.00001440341,0.00028617564,0.0000012804566,0.00014357446],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9988087,0.00013849167,0.000397408,0.00032186037,0.000087579094,0.0002459973],"domain_scores_gemma":[0.99961305,0.00015514325,0.00009484761,0.00005271348,0.000025714495,0.000058514568],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00054038904,0.00013059413,0.0002454783,0.000028140721,0.00012846154,0.000059813734,0.00015418328,0.0001173299,0.00005610157],"category_scores_gemma":[0.000032710417,0.000057592988,0.00004580629,0.00015986673,0.000052523832,0.000069595095,0.000101025355,0.00009437389,0.000015903035],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007076996,0.000025944972,0.004134605,0.00006117837,0.000087789194,0.000005923248,0.00023315453,0.000022636024,0.98967916,0.0029876786,0.000020630778,0.0026705193],"study_design_scores_gemma":[0.0006318928,0.00012142375,0.6004427,0.00010812291,0.00014949549,0.000054519158,0.00071658095,0.0039674435,0.35872102,0.00075641385,0.033646636,0.00068375457],"about_ca_topic_score_codex":0.000075921096,"about_ca_topic_score_gemma":0.00088134414,"teacher_disagreement_score":0.63095814,"about_ca_system_score_codex":0.000020985864,"about_ca_system_score_gemma":0.000014623495,"threshold_uncertainty_score":0.2348574},"labels":[],"label_agreement":null},{"id":"W4403700627","doi":"10.1186/s12870-024-05722-0","title":"Understanding rhizospheric microbial dynamics in gladiolus corms through quorum sensing and quorum quenching for disease control and growth promotion","year":2024,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Plant-Microbe Interactions and Immunity","field":"Agricultural and Biological Sciences","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Réseau Technoscience","funders":"Rheinische Friedrich-Wilhelms-Universität Bonn; King Saud University","keywords":"Gladiolus; Biology; Rhizosphere; Quorum sensing; Quorum Quenching; Biotechnology; Bacteria; Botany; Genetics; Biofilm","score_opus":0.04609986703420473,"score_gpt":0.23885541382746794,"score_spread":0.1927555467932632,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4403700627","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.989854,0.00050559634,0.006360608,0.0012931392,0.0003694981,0.00032719565,0.0011876172,0.00005491677,0.00004747321],"genre_scores_gemma":[0.99872893,0.00020053895,0.0002726098,0.00010174624,0.00008659837,0.000008352213,0.0005713063,0.0000016903523,0.000028236786],"study_design_codex":"bench_or_experimental","study_design_gemma":"simulation_or_modeling","domain_scores_codex":[0.9991001,0.000101727725,0.00019346524,0.00029175798,0.000026634789,0.0002863161],"domain_scores_gemma":[0.99935275,0.00050240784,0.000049488193,0.000027908169,0.000014418447,0.000053039465],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00019441078,0.00014017499,0.00019026692,0.000020073814,0.00021789708,0.00010687293,0.000058400205,0.00010649165,0.000007205382],"category_scores_gemma":[0.000052756102,0.000062921674,0.000043812106,0.00010919216,0.000082990504,0.00015825983,0.00004035939,0.00015089977,0.0000015038187],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0007276472,0.00010075927,0.10244587,0.00019242943,0.00006226204,0.00004047856,0.00020202812,0.0000054634575,0.86694604,0.020073168,0.00050863944,0.0086952],"study_design_scores_gemma":[0.0052317716,0.0036125886,0.33569038,0.002744259,0.0003824715,0.0034296317,0.0072391713,0.5210656,0.0033817596,0.101076104,0.012972407,0.0031738402],"about_ca_topic_score_codex":0.0015543064,"about_ca_topic_score_gemma":0.014043241,"teacher_disagreement_score":0.8635643,"about_ca_system_score_codex":0.00014174341,"about_ca_system_score_gemma":0.000018150695,"threshold_uncertainty_score":0.78364575},"labels":[],"label_agreement":null},{"id":"W4404186208","doi":"10.1186/s12870-024-05721-1","title":"Japonolirion osense, a close relative of the mycoheterotrophic genus Petrosavia, exhibits complete autotrophic capabilities","year":2024,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Plant Diversity and Evolution","field":"Agricultural and Biological Sciences","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"Japan Science and Technology Agency; Precursory Research for Embryonic Science and Technology; Institut Universitaire de France; Přírodovědecká Fakulta, Univerzita Karlova; Ministerstvo Školství, Mládeže a Tělovýchovy; Akademie Věd České Republiky; Grantová Agentura České Republiky; Univerzita Karlova v Praze","keywords":"Biology; Genus; Autotroph; Botany; Evolutionary biology; Paleontology","score_opus":0.0320660134252798,"score_gpt":0.20507314191680126,"score_spread":0.17300712849152144,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4404186208","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9949075,0.00070197694,0.000006858037,0.00053898524,0.0005402236,0.00018725227,0.0026842314,0.000078484605,0.0003544983],"genre_scores_gemma":[0.9990575,0.00007010719,0.000039190232,0.00006112183,0.00015436376,0.0000058919104,0.0003228462,8.0571783e-7,0.0002881958],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9988463,0.00025669104,0.00021024808,0.00030620932,0.0001078483,0.00027269346],"domain_scores_gemma":[0.9993497,0.0004216784,0.00007852738,0.000073295276,0.00003319937,0.000043588574],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00016519823,0.00014166138,0.00020970366,0.000025449945,0.00019581868,0.000019853338,0.0002460669,0.00017410672,0.00010247352],"category_scores_gemma":[0.00006445484,0.000049311464,0.00016347792,0.00021721705,0.00025059507,0.00008838634,0.00013162417,0.00019535098,0.00009610226],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00016906358,0.00005393108,0.019243723,0.00006876672,0.00005509526,0.000015622589,0.00037388707,0.000020347059,0.9546205,0.022738062,0.0011380832,0.0015029559],"study_design_scores_gemma":[0.00043361643,0.001217797,0.8956153,0.00037887233,0.00013606601,0.0005222241,0.00040141074,0.002465651,0.007969415,0.02615644,0.06400997,0.0006932776],"about_ca_topic_score_codex":0.0006487742,"about_ca_topic_score_gemma":0.001283988,"teacher_disagreement_score":0.94665104,"about_ca_system_score_codex":0.00004413818,"about_ca_system_score_gemma":0.000022297327,"threshold_uncertainty_score":0.20108631},"labels":[],"label_agreement":null},{"id":"W4404600620","doi":"10.1186/s12870-024-05829-4","title":"Cultivating sustainable futures: multi-environment evaluation and seed yield stability of faba bean (Vicia faba L.) genotypes by using different stability parameters in Ethiopia","year":2024,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Genetic and Environmental Crop Studies","field":"Agricultural and Biological Sciences","cited_by":14,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University","funders":"Ethiopian Institute of Agricultural Research","keywords":"Biology; Vicia faba; Ammi; Biplot; Agriculture; Cultivar; Gene–environment interaction; Abiotic component; Crop; Agronomy; Adaptability; Biotechnology; Food security; Sustainable agriculture; Genotype; Ecology","score_opus":0.06882828046878253,"score_gpt":0.25631167577075004,"score_spread":0.1874833953019675,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4404600620","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99647236,0.00259588,0.00007406522,0.0000857389,0.000056718665,0.00048429775,0.0001996785,0.000015156609,0.000016104557],"genre_scores_gemma":[0.99921,0.00022893265,0.00034722075,0.000020034275,0.000018401777,0.000024704139,0.00013813612,0.0000012936713,0.000011260191],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99858975,0.00025221586,0.00030368657,0.00042888045,0.00012769371,0.00029775023],"domain_scores_gemma":[0.9993884,0.00042658515,0.00007016727,0.000058516944,0.000011597958,0.00004476331],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00055327796,0.00017093847,0.00025303947,0.00001747908,0.00013075916,0.000018121264,0.00008444747,0.0001354114,0.00009100544],"category_scores_gemma":[0.00010384877,0.00007284831,0.000048682377,0.00008469807,0.00020117064,0.000040728377,0.00016018555,0.00012669664,0.0000012093427],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000033491215,0.00007934626,0.46295765,0.00005734385,0.000013933451,5.4488663e-7,0.00058802805,0.000035045257,0.533955,0.000014251627,0.0000052682976,0.0022601301],"study_design_scores_gemma":[0.00021491549,0.0002918076,0.93927455,0.000038572358,0.000037160964,0.0000023410976,0.01364296,0.003192374,0.04273071,0.00017823443,0.00017447407,0.00022188935],"about_ca_topic_score_codex":0.00214577,"about_ca_topic_score_gemma":0.0017683437,"teacher_disagreement_score":0.49122426,"about_ca_system_score_codex":0.00012887346,"about_ca_system_score_gemma":0.00000838655,"threshold_uncertainty_score":0.32437766},"labels":[],"label_agreement":null},{"id":"W4404629997","doi":"10.1186/s12870-024-05838-3","title":"Correction: Japonolirion osense, a close relative of the mycoheterotrophic genus Petrosavia, exhibits complete autotrophic capabilities","year":2024,"lang":"en","type":"erratum","venue":"BMC Plant Biology","topic":"Diatoms and Algae Research","field":"Materials Science","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"Biology; Genus; Botany; Evolutionary biology","score_opus":0.029801000237763147,"score_gpt":0.2682925503162818,"score_spread":0.23849155007851866,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4404629997","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8339051,0.008524212,0.00003814126,0.00043681014,0.13183917,0.0013043092,0.009319265,0.00025149962,0.014381476],"genre_scores_gemma":[0.6645457,0.0013246792,0.0003061772,0.00018461158,0.0054666162,0.00035552465,0.0021471868,0.00020890674,0.32546058],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9961827,0.00091480376,0.0007471365,0.0009505141,0.00044442553,0.00076043315],"domain_scores_gemma":[0.99781215,0.0005947371,0.0004527119,0.0008373167,0.00019079198,0.000112283305],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0006185212,0.00049420533,0.0009314914,0.0002973475,0.00024449523,0.00009431524,0.00081073307,0.000817926,0.0005031245],"category_scores_gemma":[0.0004580302,0.00031766295,0.00040165818,0.0003409274,0.0010223726,0.00008461117,0.0006482386,0.0014667312,0.0007159636],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00036269915,0.00015940901,0.000624961,0.0015479645,0.0001700922,0.00008423534,0.0008190905,0.00003617053,0.21531601,0.01235039,0.7681967,0.0003322685],"study_design_scores_gemma":[0.0011576775,0.0021472292,0.011214955,0.0035825472,0.00040949814,0.0013842294,0.00027305356,0.0028972377,0.016446956,0.019584607,0.938971,0.0019310208],"about_ca_topic_score_codex":0.0010903021,"about_ca_topic_score_gemma":0.0009120246,"teacher_disagreement_score":0.3110791,"about_ca_system_score_codex":0.00021309039,"about_ca_system_score_gemma":0.0009196036,"threshold_uncertainty_score":0.9999275},"labels":[],"label_agreement":null},{"id":"W4405015334","doi":"10.1186/s12870-024-05899-4","title":"Characterization of tae-miR156(s) and their response to abiotic stress in wheat (Triticum aestivum L.)","year":2024,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Plant Molecular Biology Research","field":"Agricultural and Biological Sciences","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ministry of Agriculture","funders":"","keywords":"Biology; Abiotic component; Abiotic stress; Gene; Botany; Drought stress; Horticulture; Genetics","score_opus":0.023129394028765914,"score_gpt":0.2507160673550016,"score_spread":0.22758667332623572,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4405015334","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9958309,0.00025712626,0.000030762178,0.001339574,0.0001039864,0.0002559789,0.0021259508,0.00003390688,0.000021841835],"genre_scores_gemma":[0.9990598,0.000073669515,0.000022175052,0.00008912515,0.000052362942,0.000016374814,0.00061803934,0.0000010452069,0.00006742104],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99870116,0.00042397215,0.00019805261,0.00033961842,0.000048454567,0.0002887661],"domain_scores_gemma":[0.9990639,0.0007685294,0.00002437974,0.000049026527,0.000017749073,0.00007639235],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00045505996,0.00012321549,0.0002126767,0.00007614911,0.00003496346,0.000017192482,0.00016809639,0.00017990428,0.00003194149],"category_scores_gemma":[0.00016799688,0.000046864887,0.000031454423,0.00031068097,0.00010031472,0.000034876448,0.000107984866,0.00012191809,0.000019106745],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00040012485,0.00002933948,0.039573207,0.000019227231,0.0000064321484,0.000020094565,0.00007024957,2.798563e-7,0.9556115,0.00012731474,0.000015630872,0.004126546],"study_design_scores_gemma":[0.00014927954,0.0008213233,0.7275191,0.00017413526,0.0000043745104,0.00012448878,0.000084146894,0.00034553034,0.2649462,0.00014148153,0.0054848427,0.00020511352],"about_ca_topic_score_codex":0.00008403253,"about_ca_topic_score_gemma":0.0009916644,"teacher_disagreement_score":0.69066536,"about_ca_system_score_codex":0.000015785461,"about_ca_system_score_gemma":0.00002443847,"threshold_uncertainty_score":0.19110946},"labels":[],"label_agreement":null},{"id":"W4405038010","doi":"10.1186/s12870-024-05884-x","title":"Molecular identification of a Pm4 allele conferring powdery mildew resistance in durum wheat DR88","year":2024,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Wheat and Barley Genetics and Pathology","field":"Agricultural and Biological Sciences","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Key Research and Development Program of China; Chinese Academy of Agricultural Sciences; Institute of Genetics and Developmental Biology, Chinese Academy of Sciences; Institute of Crop Sciences, Chinese Academy of Agricultural Sciences; Chinese Academy of Sciences; Institute of Genetics; National Natural Science Foundation of China","keywords":"Powdery mildew; Biology; Blumeria graminis; Common wheat; Genetics; Bulked segregant analysis; Locus (genetics); Allele; Gene; Gene mapping; Plant disease resistance; Chromosome; Botany","score_opus":0.022368972132768533,"score_gpt":0.23403948772299515,"score_spread":0.21167051559022662,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4405038010","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99327797,0.004875195,0.000044743254,0.00054294814,0.00020147584,0.000109307126,0.00017384386,0.000025489588,0.00074903667],"genre_scores_gemma":[0.9988809,0.00032819365,0.000087086235,0.000055943998,0.000071037844,0.000011200274,0.00029417116,8.507538e-7,0.00027056405],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9991117,0.00009776058,0.00027178088,0.00027042316,0.000047877522,0.00020044378],"domain_scores_gemma":[0.9997504,0.0001117495,0.000039682087,0.000050740713,0.000017704515,0.000029756766],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00022508977,0.00009096201,0.00016803922,0.000029277637,0.000030787964,0.000017804388,0.00013938715,0.00013599762,0.000053655585],"category_scores_gemma":[0.00001803918,0.000039309143,0.000057606434,0.0001583839,0.00006019812,0.000020735271,0.00003615207,0.0000778063,0.000017631892],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000035162026,0.00002185852,0.0065401387,0.000029322979,0.0000055220985,0.000019189003,0.000043934993,0.0000031528589,0.98498994,0.0068758563,0.00021922243,0.0012167084],"study_design_scores_gemma":[0.0005225235,0.0006161868,0.31395563,0.0002928492,0.00004563309,0.000105621555,0.00033066148,0.00077155576,0.5593237,0.023073664,0.10018919,0.0007727438],"about_ca_topic_score_codex":0.000100273035,"about_ca_topic_score_gemma":0.0034265313,"teacher_disagreement_score":0.42566618,"about_ca_system_score_codex":0.000007874579,"about_ca_system_score_gemma":0.000013262301,"threshold_uncertainty_score":0.19120848},"labels":[],"label_agreement":null},{"id":"W4405596668","doi":"10.1186/s12870-024-05930-8","title":"Identification of two QTLs for web blotch resistance in peanut (Arachis hypogaea L.) based on BSA-seq","year":2024,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Peanut Plant Research Studies","field":"Agricultural and Biological Sciences","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ministry of Agriculture","funders":"Henan Academy of Agricultural Sciences; National Natural Science Foundation of China","keywords":"Biology; Quantitative trait locus; Arachis hypogaea; Bulked segregant analysis; Population; Agronomy; Genetics; Gene mapping; Gene; Chromosome","score_opus":0.04835729298439897,"score_gpt":0.30035738690277636,"score_spread":0.2520000939183774,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4405596668","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9924092,0.0010060234,0.000032844906,0.0012054964,0.00019159097,0.00043721875,0.003776846,0.000060187962,0.0008805857],"genre_scores_gemma":[0.99726653,0.00012453801,0.0001713443,0.000060201848,0.00015912451,0.00009262049,0.0014398267,5.485772e-7,0.00068525673],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99865925,0.00016531759,0.0003392208,0.0003944654,0.00012403428,0.000317717],"domain_scores_gemma":[0.9977907,0.0019798162,0.00007770279,0.00007171815,0.000040670227,0.000039410636],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007630565,0.00012816829,0.00022800478,0.000065109234,0.000076145705,0.000026015794,0.00025188667,0.0000818601,0.00004102411],"category_scores_gemma":[0.00028843104,0.000051076622,0.00009000119,0.00027645146,0.000100021985,0.000041393705,0.000041469277,0.00011121599,0.000009376039],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003541638,0.000093364484,0.014747553,0.000115019786,0.000014329911,0.000011150487,0.000028334285,0.000011065882,0.9714322,0.0050351014,0.005953488,0.002204205],"study_design_scores_gemma":[0.0023719498,0.002041056,0.6220132,0.00094888645,0.00007237803,0.000019957697,0.00031736307,0.024509015,0.10661636,0.01834705,0.22146945,0.0012733267],"about_ca_topic_score_codex":0.000098078046,"about_ca_topic_score_gemma":0.006481342,"teacher_disagreement_score":0.8648159,"about_ca_system_score_codex":0.000039222894,"about_ca_system_score_gemma":0.00003135991,"threshold_uncertainty_score":0.3616741},"labels":[],"label_agreement":null},{"id":"W4405652399","doi":"10.1186/s12870-024-05971-z","title":"Systematic analysis and functional characterization of the chitinase gene family in Fagopyrum tataricum under salt stress","year":2024,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Studies on Chitinases and Chitosanases","field":"Biochemistry, Genetics and Molecular Biology","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"Biology; Chitinase; Abiotic stress; Gene family; Phylogenetic tree; Gene; Abiotic component; Botany; Genetics; Computational biology; Gene expression; Evolutionary biology; Ecology","score_opus":0.011655654199699,"score_gpt":0.2232752737850574,"score_spread":0.2116196195853584,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4405652399","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99408954,0.0024430496,0.001907296,0.00006153613,0.00023566035,0.00016760967,0.0010557648,0.00000713987,0.00003242235],"genre_scores_gemma":[0.9978156,0.00038891254,0.000031093583,0.00011497261,0.0000883239,0.000027551612,0.0014758629,0.0000068115028,0.000050870076],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99916476,0.000111988214,0.0002607256,0.00026547958,0.000057014226,0.00014005793],"domain_scores_gemma":[0.9996454,0.00006436937,0.00008099579,0.00016700325,0.000019235089,0.000022978002],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0000938236,0.00011673305,0.0002338795,0.000095477364,0.00004581688,0.000012190325,0.00007867915,0.000091879905,0.000005644407],"category_scores_gemma":[0.00003907481,0.00007485635,0.00009947763,0.00023588262,0.00008364064,0.0000022198992,0.00010013365,0.000052313953,9.465894e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000048857946,0.000041550964,0.100516416,0.0009835947,0.00045743876,0.0000026701057,0.00002517954,0.000065264,0.89718854,0.0005967387,0.000037954873,0.000035793397],"study_design_scores_gemma":[0.00025318563,0.00010293271,0.85519403,0.0003232664,0.00033855313,0.000027820302,0.00026813656,0.00053709565,0.14263318,0.000056805093,0.000095816475,0.00016920036],"about_ca_topic_score_codex":0.000087301014,"about_ca_topic_score_gemma":0.0015125511,"teacher_disagreement_score":0.7546776,"about_ca_system_score_codex":0.000006988158,"about_ca_system_score_gemma":0.00004473755,"threshold_uncertainty_score":0.30525532},"labels":[],"label_agreement":null},{"id":"W4406389733","doi":"10.1186/s12870-025-06091-y","title":"TaSnRK3.23B, a CBL-interacting protein kinase of wheat, confers drought stress tolerance by promoting ROS scavenging in Arabidopsis","year":2025,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Plant nutrient uptake and metabolism","field":"Agricultural and Biological Sciences","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ministry of Agriculture","funders":"National Natural Science Foundation of China","keywords":"Biology; Arabidopsis; Scavenging; Reactive oxygen species; Drought stress; Cell biology; Kinase; Protein kinase A; Fight-or-flight response; Botany; Gene; Genetics; Biochemistry; Antioxidant; Mutant","score_opus":0.014742001228287187,"score_gpt":0.22899856000853647,"score_spread":0.21425655878024927,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4406389733","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9963538,0.001159952,0.000026025555,0.0002937085,0.00022393146,0.00049192173,0.0008310886,0.000043380034,0.0005761629],"genre_scores_gemma":[0.9987623,0.00012169456,0.00013218282,0.00009696129,0.000077947385,0.0000585899,0.00045955006,0.0000011423253,0.00028962636],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9983416,0.00024722866,0.00047136258,0.0004119058,0.00008392368,0.00044393932],"domain_scores_gemma":[0.99920726,0.00041832548,0.00020728922,0.00006885616,0.00003871903,0.000059522357],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004383345,0.00019123526,0.00041898253,0.000053471642,0.00009456046,0.000025195815,0.0002764492,0.00016911396,0.000032572596],"category_scores_gemma":[0.00023236258,0.00008892027,0.000083152474,0.00036262217,0.000060274073,0.00009713081,0.00008113995,0.0002156104,0.0000045512897],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012446262,0.00014514454,0.061352767,0.00004862862,0.00001271738,0.000007809259,0.000099674566,0.000007082888,0.91945237,0.00081488694,0.00020656984,0.017727867],"study_design_scores_gemma":[0.0014647092,0.00028215244,0.036104456,0.0020356441,0.000036047,0.00002732309,0.0010744445,0.0027143324,0.8700808,0.00041622733,0.08511229,0.00065153174],"about_ca_topic_score_codex":0.00059984595,"about_ca_topic_score_gemma":0.0010666355,"teacher_disagreement_score":0.08490572,"about_ca_system_score_codex":0.000022861803,"about_ca_system_score_gemma":0.000024367711,"threshold_uncertainty_score":0.36260635},"labels":[],"label_agreement":null},{"id":"W4406726337","doi":"10.1186/s12870-024-06032-1","title":"Transcriptome analysis provides insights into the role of TLP16 in Musa acuminata Resistance to Fusarium oxysporum f. sp. cubense wilt","year":2025,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Banana Cultivation and Research","field":"Agricultural and Biological Sciences","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ministry of Agriculture","funders":"","keywords":"Biology; Fusarium oxysporum f.sp. cubense; Fusarium wilt; Fusarium oxysporum; Musa acuminata; Transcriptome; Resistance (ecology); Botany; Biotechnology; Gene; Agronomy; Gene expression; Genetics","score_opus":0.01797288978787528,"score_gpt":0.25582199100181774,"score_spread":0.23784910121394245,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4406726337","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99346936,0.0010368117,0.000017919265,0.003978643,0.000054054923,0.00029534812,0.000090485206,0.000017265456,0.0010401278],"genre_scores_gemma":[0.9981887,0.00011211602,0.00007908874,0.00028066864,0.000026771171,0.000031991356,0.000191569,4.745414e-7,0.0010886667],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9987576,0.00024805093,0.00029665508,0.00032395506,0.00010955346,0.00026418743],"domain_scores_gemma":[0.9993552,0.00035197884,0.000059719576,0.00011075778,0.00007120287,0.000051161416],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003371194,0.00011489095,0.00027565792,0.00012412062,0.00012222627,0.0000179886,0.00045930187,0.00013646805,0.0000567383],"category_scores_gemma":[0.000117009215,0.000035999077,0.00009953394,0.0018419032,0.00014199974,0.00004103394,0.00008298943,0.00013284414,0.000007773401],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00025998527,0.00009020515,0.14222224,0.000014150793,0.00007024048,0.0000023257196,0.00060617825,0.000009138797,0.8372293,0.010559417,0.00035480486,0.008582016],"study_design_scores_gemma":[0.00017299154,0.000110135385,0.7578252,0.000030223639,0.000037950012,4.5640618e-7,0.0015666155,0.00014918852,0.043807697,0.0020483541,0.19410299,0.00014818893],"about_ca_topic_score_codex":0.00214494,"about_ca_topic_score_gemma":0.09188948,"teacher_disagreement_score":0.79342157,"about_ca_system_score_codex":0.00002463247,"about_ca_system_score_gemma":0.000030946107,"threshold_uncertainty_score":0.9246812},"labels":[],"label_agreement":null},{"id":"W4408175679","doi":"10.1186/s12870-025-06313-3","title":"The CGA1-SNAT regulatory module potentially contributes to cytokinin-mediated melatonin biosynthesis and drought tolerance in wheat","year":2025,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Circadian rhythm and melatonin","field":"Neuroscience","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Etobicoke General Hospital","funders":"Högskolan i Skövde","keywords":"Biology; Melatonin; Cytokinin; Biosynthesis; Drought tolerance; Botany; Cell biology; Computational biology; Gene; Biochemistry; Neuroscience; Auxin","score_opus":0.012903123222442123,"score_gpt":0.23601971490739077,"score_spread":0.22311659168494863,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4408175679","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9912782,0.0029812912,0.00028799407,0.0028967438,0.00077222206,0.0004748821,0.00027991674,0.00007407959,0.00095466914],"genre_scores_gemma":[0.99676436,0.000513722,0.00009726913,0.0016566548,0.00004501397,0.00006167108,0.000014817431,0.000012267078,0.0008342268],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99801886,0.00032048818,0.00037848824,0.0006211798,0.00009221844,0.00056874874],"domain_scores_gemma":[0.99762267,0.0018172478,0.000076137956,0.0003571357,0.000025230476,0.00010159276],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00041583687,0.00021459682,0.00036040452,0.00024512497,0.0002569299,0.000056476387,0.00032066804,0.0002388141,0.0000097584625],"category_scores_gemma":[0.0010203222,0.00015830447,0.000056329223,0.00048219375,0.00030454437,0.000062976505,0.00015151607,0.00020792632,0.000048728336],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00043897683,0.00005749121,0.05583478,0.000024545041,0.000018538982,0.00005035906,0.00011825186,0.000061474384,0.7414163,0.19685385,0.0015588771,0.0035665988],"study_design_scores_gemma":[0.0013402085,0.000071673945,0.16459715,0.0001302909,0.000019839847,0.000070009155,0.00005310031,0.0013254472,0.7175578,0.0015807977,0.11293097,0.00032272257],"about_ca_topic_score_codex":0.000050487153,"about_ca_topic_score_gemma":0.00055966503,"teacher_disagreement_score":0.19527304,"about_ca_system_score_codex":0.00006410571,"about_ca_system_score_gemma":0.00015801642,"threshold_uncertainty_score":0.64554685},"labels":[],"label_agreement":null},{"id":"W4408804015","doi":"10.1186/s12870-025-06395-z","title":"Comparison between tropical legumes and natural grasses in improving tropical rainforest soil health: a case study in guava (Psidium Guajava L.) orchards","year":2025,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Agroforestry and silvopastoral systems","field":"Agricultural and Biological Sciences","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ministry of Agriculture","funders":"","keywords":"Biology; Topsoil; Agronomy; Psidium; Subsoil; Rainforest; Soil fertility; Botany; Soil water; Ecology","score_opus":0.04641015723622762,"score_gpt":0.3168567944620937,"score_spread":0.2704466372258661,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4408804015","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99778867,0.0005384913,0.000010045123,0.00071428355,0.00025612098,0.00056305516,0.00007145715,0.000036218487,0.00002167908],"genre_scores_gemma":[0.99945986,0.0000118115395,0.000027172873,0.0001080014,0.00019926282,0.00003760568,0.000082801555,9.99489e-7,0.00007245728],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99766666,0.00056208787,0.00067455287,0.0004716462,0.00009299215,0.00053207064],"domain_scores_gemma":[0.9990037,0.00066887046,0.00013304224,0.0000700431,0.000018522309,0.00010582122],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002952422,0.00022823228,0.00068025396,0.000067909,0.00018001965,0.00004626702,0.00021376718,0.00022147303,0.000011108679],"category_scores_gemma":[0.00007950412,0.000095624746,0.00005564527,0.00032803792,0.00012915299,0.00007921591,0.00014347672,0.0003967884,0.000003940285],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001084667,0.00012985257,0.99054587,0.000027898539,0.000009599525,0.0001517388,0.00024760186,0.0000022220675,0.0010208648,0.00023635174,0.000117520205,0.007402044],"study_design_scores_gemma":[0.00064729893,0.0008148346,0.99422777,0.000039171646,0.000006282038,0.00014815928,0.0027242035,0.00026601198,0.00004605557,0.000063186526,0.0008426245,0.0001743856],"about_ca_topic_score_codex":0.022151731,"about_ca_topic_score_gemma":0.3447047,"teacher_disagreement_score":0.32255295,"about_ca_system_score_codex":0.00007765232,"about_ca_system_score_gemma":0.000053945387,"threshold_uncertainty_score":0.98435986},"labels":[],"label_agreement":null},{"id":"W4409119459","doi":"10.1186/s12870-025-06365-5","title":"Diurnal dynamics of different circadian transcription modules in Chinese pine needles and roots during dormancy induction","year":2025,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Plant Molecular Biology Research","field":"Agricultural and Biological Sciences","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"National Key Research and Development Program of China","keywords":"Biology; Dormancy; Pinus tabulaeformis; Transcriptome; Gene; Botany; Cell biology; Circadian rhythm; Transcription factor; Gene regulatory network; Gene expression; Genetics; Neuroscience","score_opus":0.01415374226503191,"score_gpt":0.23351290278489364,"score_spread":0.21935916051986173,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4409119459","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9987302,0.00034354354,0.000030956828,0.00034742325,0.00010614341,0.00014998953,0.00019036546,0.000015566673,0.00008583804],"genre_scores_gemma":[0.9989068,0.00037505248,0.000023913144,0.000015217173,0.000037231344,0.000010642909,0.00059404876,5.056198e-7,0.000036568053],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99913526,0.00014905958,0.00021575217,0.00022632156,0.000046245914,0.00022738405],"domain_scores_gemma":[0.9997658,0.00008960578,0.000050534203,0.000037263642,0.000017170012,0.000039607396],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012507942,0.00011551662,0.00021965483,0.000094028794,0.00006459503,0.000008752654,0.00013247562,0.00018724661,0.000012191281],"category_scores_gemma":[0.000038494047,0.000045795125,0.00003826094,0.00022149153,0.0000995423,0.00003755501,0.000051954532,0.00015590743,8.8309514e-7],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000084050924,0.000034026132,0.43578777,0.000017185026,0.000007058963,0.0000018756643,0.000013303105,0.0000022354789,0.560484,0.00037904189,0.0000011782155,0.003188289],"study_design_scores_gemma":[0.00028075342,0.000109498316,0.9926508,0.00003883366,0.000003980696,0.000037233942,0.0000627206,0.0003308304,0.005167968,0.0012218171,0.000014879119,0.000080679485],"about_ca_topic_score_codex":0.00034196698,"about_ca_topic_score_gemma":0.014360604,"teacher_disagreement_score":0.556863,"about_ca_system_score_codex":0.000028412114,"about_ca_system_score_gemma":0.0000070871197,"threshold_uncertainty_score":0.80135536},"labels":[],"label_agreement":null},{"id":"W4409277150","doi":"10.1186/s12870-025-06429-6","title":"High-throughput phenotyping of buckwheat (Fagopyrum esculentum Moench.) genotypes under water stress: exploring drought resistance for sustainable agriculture","year":2025,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Seed and Plant Biochemistry","field":"Agricultural and Biological Sciences","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"Horizon 2020 Framework Programme; Narodowa Agencja Wymiany Akademickiej; Narodowym Centrum Nauki; Grantová Agentura České Republiky","keywords":"Biology; Fagopyrum; Agronomy; Drought tolerance; Abiotic component; Biomass (ecology); Agriculture; Abiotic stress; Crop; Resistance (ecology); Adaptability; Botany; Ecology; Gene","score_opus":0.022904346165434863,"score_gpt":0.21165715288269005,"score_spread":0.1887528067172552,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4409277150","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99422824,0.0017926381,0.00027863204,0.0007843663,0.00034835414,0.0004000989,0.0008626585,0.000085895146,0.0012191151],"genre_scores_gemma":[0.99049395,0.00027439813,0.0004097281,0.00019562016,0.00038522112,0.00009928438,0.0027371966,0.000001937871,0.0054026386],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.998353,0.00006799792,0.00034850306,0.0004958382,0.00008814276,0.00064651563],"domain_scores_gemma":[0.9992427,0.00035900236,0.00009810173,0.00010666819,0.00013526756,0.000058258658],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00019752265,0.00024661413,0.00037768288,0.00002401451,0.00027977204,0.000036609268,0.000357675,0.00028436966,0.00008203673],"category_scores_gemma":[0.00005422974,0.00008972297,0.00013475817,0.00020326194,0.00008758432,0.000105429404,0.0001320947,0.0001336181,0.000005678908],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00034846747,0.00009109111,0.003517135,0.00036000417,0.000077966884,0.0000055025002,0.00007933347,0.00005017478,0.963862,0.027129615,0.003982821,0.0004958965],"study_design_scores_gemma":[0.00046735237,0.00010046386,0.0059131742,0.00019237818,0.0000612222,0.0000066141647,0.0024568355,0.000020623498,0.91014934,0.010486172,0.06974247,0.00040337615],"about_ca_topic_score_codex":0.0004894807,"about_ca_topic_score_gemma":0.0011290173,"teacher_disagreement_score":0.06575965,"about_ca_system_score_codex":0.00004539734,"about_ca_system_score_gemma":0.00002312514,"threshold_uncertainty_score":0.36587965},"labels":[],"label_agreement":null},{"id":"W4409469963","doi":"10.1186/s12870-025-06498-7","title":"Unveiling the heterosis pattern of modern maize breeding in Southwest China through population structure and genetic diversity analysis","year":2025,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Genetic Mapping and Diversity in Plants and Animals","field":"Biochemistry, Genetics and Molecular Biology","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ministry of Agriculture","funders":"China Agricultural Research System; Sichuan Agricultural University","keywords":"Biology; Heterosis; Genetic diversity; China; Diversity (politics); Population structure; Population; Biotechnology; Evolutionary biology; Agronomy; Demography; Hybrid; Anthropology","score_opus":0.01499775408188453,"score_gpt":0.22793209244322468,"score_spread":0.21293433836134015,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4409469963","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9940835,0.0004718282,0.004832985,0.000037031754,0.000062695006,0.00007442003,0.00038143317,0.0000037709299,0.000052328003],"genre_scores_gemma":[0.9990884,0.00014551751,0.00031423935,0.00008845998,0.000024013205,8.604061e-7,0.00030981418,0.000001973391,0.000026702157],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99935365,0.00006528174,0.00015367065,0.00024574337,0.000040988736,0.00014069749],"domain_scores_gemma":[0.9997345,0.000023308146,0.000074895004,0.00013603742,0.000014832834,0.000016377107],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00006869146,0.00010083587,0.0001837086,0.00007378626,0.00012904323,0.00001000604,0.00014226974,0.00013408417,0.000007894714],"category_scores_gemma":[0.000016954209,0.00007469393,0.00006252111,0.000119946664,0.000057388745,0.0000019852228,0.00027670202,0.000056753404,2.0290277e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00003516882,0.000010563237,0.94753575,0.000022472737,0.000107261396,5.795723e-7,0.00018028225,0.00085021975,0.05061221,0.00002472492,0.000023260765,0.000597489],"study_design_scores_gemma":[0.00028772533,0.00005521503,0.9951394,0.000013465341,0.00012338648,0.000004142078,0.00011144754,0.0012416235,0.0024472326,0.00043574374,0.000051712435,0.00008887023],"about_ca_topic_score_codex":0.0021515826,"about_ca_topic_score_gemma":0.002426215,"teacher_disagreement_score":0.04816498,"about_ca_system_score_codex":0.0000047289614,"about_ca_system_score_gemma":0.000010350558,"threshold_uncertainty_score":0.32525638},"labels":[],"label_agreement":null},{"id":"W4409734139","doi":"10.1186/s12870-025-06580-0","title":"Identification of critical transition signal (CTS) to characterize regulated stochasticity during ABA-induced growth-to-defense transition","year":2025,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Plant Stress Responses and Tolerance","field":"Agricultural and Biological Sciences","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Etobicoke General Hospital","funders":"Agricultural Biotechnology Research Institute of Iran","keywords":"Biology; Identification (biology); Transition (genetics); SIGNAL (programming language); Cell biology; Computational biology; Evolutionary biology; Ecology; Genetics; Computer science; Gene","score_opus":0.02303049732201558,"score_gpt":0.24457292939212866,"score_spread":0.22154243207011307,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4409734139","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9909775,0.000014477257,0.004477311,0.0021019292,0.0001394779,0.00031174722,0.0019033396,0.000054852815,0.00001931126],"genre_scores_gemma":[0.99908924,0.0000069103116,0.000059780687,0.00026793408,0.00007995274,0.000033403154,0.00044126477,9.097729e-7,0.000020586749],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9987169,0.00017448724,0.00037935114,0.00036422812,0.00009372311,0.00027134176],"domain_scores_gemma":[0.99935514,0.0003357938,0.00006221934,0.000054002823,0.000096768665,0.000096064425],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00016178086,0.00014140435,0.00025695196,0.00006347215,0.00014430378,0.000019999805,0.00015204342,0.00016494958,0.000055812347],"category_scores_gemma":[0.00011045681,0.000072793526,0.00007717624,0.00032968645,0.000047061636,0.000062612446,0.000020815582,0.00008971224,0.000017785638],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.001393613,0.00009342228,0.00010666908,0.00004197826,0.000009410762,0.0000045910874,0.00010861104,0.00004069709,0.9964122,0.00058418204,0.000014173851,0.0011904242],"study_design_scores_gemma":[0.00033173658,0.00037113478,0.40418643,0.0001512593,0.000032559874,0.000035382043,0.000079783924,0.0012241051,0.592976,0.00031312107,0.0000570333,0.0002414916],"about_ca_topic_score_codex":0.00017856491,"about_ca_topic_score_gemma":0.0002167502,"teacher_disagreement_score":0.40407977,"about_ca_system_score_codex":0.00002100615,"about_ca_system_score_gemma":0.000012789242,"threshold_uncertainty_score":0.29684338},"labels":[],"label_agreement":null},{"id":"W4409753072","doi":"10.1186/s12870-025-06551-5","title":"Whole-genome meta-analysis coupled with haplotype analysis reveal new genes and functional haplotypes conferring pre-harvest sprouting in rice","year":2025,"lang":"en","type":"review","venue":"BMC Plant Biology","topic":"Seed Germination and Physiology","field":"Agricultural and Biological Sciences","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"Natural Science Foundation of Shandong Province","keywords":"Biology; Haplotype; Genetics; Gene; Genome; Computational biology; Allele","score_opus":0.11871205851864834,"score_gpt":0.29912867234805485,"score_spread":0.1804166138294065,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4409753072","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.007140932,0.990704,0.000100579426,0.00010151549,0.0000657676,0.00050942093,0.0012071619,0.000059788395,0.00011083976],"genre_scores_gemma":[0.014900583,0.9544693,0.00046075933,0.00028420615,0.0004597817,0.00022992896,0.023002282,0.000007473047,0.0061856424],"study_design_codex":"meta_analysis","study_design_gemma":"not_applicable","domain_scores_codex":[0.99732095,0.00056311255,0.0006897663,0.0009232845,0.00011725229,0.00038565186],"domain_scores_gemma":[0.9976759,0.0015139316,0.00048353968,0.00013853898,0.00006992229,0.00011818809],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004396407,0.00047014843,0.0032351583,0.00035308427,0.00014085855,0.000059133585,0.00028579019,0.00043930634,0.0003807138],"category_scores_gemma":[0.00007858593,0.00017207494,0.0009747954,0.0024802324,0.00010407503,0.000055057364,0.0001418521,0.00027955114,0.000016573635],"study_design_candidate":"meta_analysis","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0013090884,0.0008735723,0.047515035,0.0112998495,0.6175014,0.00011114711,0.00030628403,0.002766474,0.01289598,0.0047833873,0.0003629594,0.30027485],"study_design_scores_gemma":[0.00036155764,0.00041202316,0.14157179,0.00018954674,0.39322367,0.00004650296,0.00006846282,0.0005048339,0.000004012368,0.00012717718,0.46216923,0.0013211952],"about_ca_topic_score_codex":0.0014198615,"about_ca_topic_score_gemma":0.010178396,"teacher_disagreement_score":0.46180627,"about_ca_system_score_codex":0.000034208653,"about_ca_system_score_gemma":0.00013446945,"threshold_uncertainty_score":0.7017013},"labels":[],"label_agreement":null},{"id":"W4409780854","doi":"10.1186/s12870-025-06541-7","title":"Genome-wide identification of Morus notabilis Aquaporin gene family and differential expression of plasma membrane intrinsic proteins in response to Ralstonia pseudosolanacearum infection","year":2025,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Ion Transport and Channel Regulation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ministry of Agriculture","funders":"Nanjing Agricultural University; Chinese Academy of Tropical Agricultural Sciences; Jiangsu University of Science and Technology; Natural Science Foundation of Jiangsu Province; Government of Jiangsu Province; China Postdoctoral Science Foundation; Jiangsu University","keywords":"Biology; Aquaporin; Gene; Identification (biology); Genome; Ralstonia solanacearum; Genetics; Gene expression; Gene family; Computational biology; Cell biology; Botany; Bacteria","score_opus":0.008997584209204667,"score_gpt":0.2310785894952496,"score_spread":0.22208100528604494,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4409780854","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9935686,0.000115433955,0.005542768,0.000045416742,0.00015177413,0.00043553364,0.00012334886,0.0000068983973,0.000010198977],"genre_scores_gemma":[0.9989346,0.00014704786,0.00023783429,0.000012441516,0.000029751187,0.00004189958,0.0004872422,0.0000068640056,0.000102290986],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9989641,0.0001309759,0.00041786072,0.00029024368,0.000056052755,0.00014080442],"domain_scores_gemma":[0.9995456,0.000032777927,0.00014123312,0.00019550757,0.000053434727,0.00003147834],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00026097675,0.000117370255,0.00021584332,0.0002334278,0.00002809617,0.0000038739086,0.00007879383,0.00021093054,0.0000042746674],"category_scores_gemma":[0.000075918266,0.00010835842,0.00004399259,0.00014486378,0.000062945466,0.0000044628264,0.000049527618,0.000053657903,7.5760335e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0030089302,0.000060133054,0.08371904,0.000070720154,0.000011549433,4.5706045e-7,0.00005605319,0.00016154717,0.9125961,0.000022711614,0.0000059523218,0.0002868212],"study_design_scores_gemma":[0.00046752498,0.00012784768,0.43471265,0.000018240404,0.0000073316896,0.0000013416579,0.000011606241,0.000047722824,0.5643388,0.000017262328,0.00019385414,0.00005580622],"about_ca_topic_score_codex":0.000095262265,"about_ca_topic_score_gemma":0.0002627553,"teacher_disagreement_score":0.3509936,"about_ca_system_score_codex":0.000014802968,"about_ca_system_score_gemma":0.00006348387,"threshold_uncertainty_score":0.4418728},"labels":[],"label_agreement":null},{"id":"W4409864164","doi":"10.1186/s12870-025-06590-y","title":"The potential spatiotemporal distribution patterns of Avena nuda and Avena sativa from global perspective provide new insights for the cultivation of commonly cultivated oats","year":2025,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Species Distribution and Climate Change","field":"Environmental Science","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"Lanzhou University","keywords":"Avena; Biology; Distribution (mathematics); Perspective (graphical); Agronomy; Botany","score_opus":0.02255542561477717,"score_gpt":0.267629919419402,"score_spread":0.24507449380462484,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4409864164","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97448105,0.000222755,0.017446337,0.0011977138,0.0001686035,0.00053814566,0.005657779,0.000013585968,0.00027405357],"genre_scores_gemma":[0.99797016,0.000094719144,0.000037207097,0.000043878186,0.00002258236,0.000017289432,0.0017596988,0.0000021109204,0.00005235215],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9992662,0.000097107346,0.00022610619,0.00019062527,0.00008184308,0.00013808635],"domain_scores_gemma":[0.9993387,0.0002776352,0.00018823433,0.00013486693,0.00003292372,0.000027654274],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009538687,0.00010045914,0.00014309488,0.0000080487835,0.000172749,0.000013285939,0.00016026369,0.000086149405,0.00014837807],"category_scores_gemma":[0.0001413728,0.000057089885,0.00005155874,0.00011180698,0.00024491886,0.000044907913,0.000111606525,0.00005297204,0.000003240119],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0011996243,0.00017839244,0.8736102,0.000027805441,0.00014288093,6.722959e-7,0.0008100483,0.00003060972,0.03984999,0.0695699,0.008635599,0.0059443046],"study_design_scores_gemma":[0.00087631034,0.00009453442,0.9724534,0.000021232867,0.00003455555,0.000001556403,0.002986749,0.0006934899,0.0100352205,0.004913571,0.007808112,0.000081227656],"about_ca_topic_score_codex":0.010940192,"about_ca_topic_score_gemma":0.008495853,"teacher_disagreement_score":0.09884327,"about_ca_system_score_codex":0.0002775223,"about_ca_system_score_gemma":0.000032764558,"threshold_uncertainty_score":0.99564606},"labels":[],"label_agreement":null},{"id":"W4410381979","doi":"10.1186/s12870-025-06666-9","title":"Comparative metabolomics of two nettle species unveils distinct high-altitude adaptation mechanisms on the Tibetan Plateau","year":2025,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Medicinal plant effects and applications","field":"Medicine","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"The Scarborough Hospital","funders":"National Ten Thousand Talent Program; Recruitment Program of Global Experts; China Scholarship Council; University of Toronto; National Natural Science Foundation of China","keywords":"Biology; Metabolic pathway; Botany; Metabolomics; Phenylpropanoid; Metabolism; Biochemistry; Biosynthesis","score_opus":0.0623894794736335,"score_gpt":0.31894286108945447,"score_spread":0.256553381615821,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4410381979","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.94291884,0.00018925022,0.044975787,0.0018214304,0.0003727919,0.0008976047,0.0006401626,0.000044086184,0.00814002],"genre_scores_gemma":[0.9961566,0.000036824513,0.0017219151,0.0005217419,0.00007879932,0.0000406082,0.0007496216,0.000004232571,0.0006896725],"study_design_codex":"theoretical_or_conceptual","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9991886,0.00011488938,0.0002538814,0.00019917377,0.0000860613,0.0001574108],"domain_scores_gemma":[0.99844384,0.0011196625,0.00013017282,0.00022043646,0.00004462198,0.000041265037],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002605817,0.00013072303,0.00041816107,0.000085324995,0.00008277393,0.0000048531624,0.00011673341,0.000069465474,0.00008962116],"category_scores_gemma":[0.00008804583,0.00007240904,0.000049931004,0.00014846047,0.00013914033,0.000011417453,0.000027203321,0.00015586102,0.000032677213],"study_design_candidate":"theoretical_or_conceptual","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003516765,0.000108091044,0.0010169186,0.000038825056,0.00011751388,0.00000258795,0.00012908076,0.00007499445,0.122208744,0.87288386,0.0028603605,0.00020736444],"study_design_scores_gemma":[0.009681155,0.0037711507,0.2127293,0.0009946483,0.0016992576,0.00015080044,0.0030071056,0.028639942,0.5761732,0.09369269,0.06862781,0.0008329127],"about_ca_topic_score_codex":0.00017726273,"about_ca_topic_score_gemma":0.00029897722,"teacher_disagreement_score":0.77919114,"about_ca_system_score_codex":0.000023032953,"about_ca_system_score_gemma":0.00009017444,"threshold_uncertainty_score":0.2952755},"labels":[],"label_agreement":null},{"id":"W4411042727","doi":"10.1186/s12870-025-06773-7","title":"Core construction establishment for Ruchengbaimao tea based on SSR markers","year":2025,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Food Quality and Safety Studies","field":"Agricultural and Biological Sciences","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ministry of Education and Child Care","funders":"National Key Research and Development Program of China; China Agricultural Research System; National Natural Science Foundation of China","keywords":"Biology; Biotechnology; Computational biology","score_opus":0.07111771955693497,"score_gpt":0.2785721294604518,"score_spread":0.20745440990351682,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4411042727","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9792173,0.00023868357,0.0005973115,0.007836753,0.0013723433,0.00088122976,0.0021057483,0.00016249508,0.007588116],"genre_scores_gemma":[0.99574727,0.00004294305,0.0011748507,0.0016802411,0.0001241509,0.00008085208,0.0008140447,4.9155994e-7,0.0003351874],"study_design_codex":"observational","study_design_gemma":"not_applicable","domain_scores_codex":[0.99920005,0.000079065074,0.00017858465,0.00026469442,0.000046822784,0.00023076254],"domain_scores_gemma":[0.9987594,0.0010730905,0.000057886667,0.000045237684,0.000034834447,0.000029551056],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00027667466,0.00011425455,0.00018680128,0.000018672774,0.00022651469,0.0000135335495,0.00012234857,0.00012617126,0.00005406039],"category_scores_gemma":[0.00016702256,0.000043218708,0.000084246196,0.00012789285,0.00012158871,0.00001902048,0.000030991174,0.0000687004,0.0000066034872],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0065400717,0.00065015105,0.41608208,0.00027912937,0.00027380633,0.0000033264457,0.00010352485,0.00018801828,0.09423986,0.19434871,0.07505369,0.21223764],"study_design_scores_gemma":[0.0018910911,0.0031077804,0.37113237,0.00015645265,0.00007929754,0.000008472844,0.0023080148,0.001695213,0.004439766,0.013937577,0.6005667,0.000677269],"about_ca_topic_score_codex":0.0001056144,"about_ca_topic_score_gemma":0.00086029596,"teacher_disagreement_score":0.525513,"about_ca_system_score_codex":0.000027228114,"about_ca_system_score_gemma":0.000018198183,"threshold_uncertainty_score":0.17624077},"labels":[],"label_agreement":null},{"id":"W4411918527","doi":"10.1186/s12870-025-06918-8","title":"Mapping, validation, and development of markers for the major adult plant stripe rust resistance locus QYr.hnk-7DL in Henan wheat","year":2025,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Wheat and Barley Genetics and Pathology","field":"Agricultural and Biological Sciences","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ministry of Agriculture","funders":"Henan Academy of Agricultural Sciences","keywords":"Biology; Stripe rust; Locus (genetics); Resistance (ecology); Plant disease resistance; Agronomy; Biotechnology; Genetics; Gene","score_opus":0.02365410976225681,"score_gpt":0.2252048816431158,"score_spread":0.201550771880859,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4411918527","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9962613,0.0012211666,0.00023797204,0.00094820856,0.00019592974,0.00037833524,0.0004648621,0.000010019382,0.00028218713],"genre_scores_gemma":[0.9968656,0.00033087106,0.0014089585,0.00021393773,0.00006203592,0.00006855112,0.0005414786,7.822651e-7,0.00050780916],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99913126,0.00007411057,0.00029372112,0.00023651973,0.000039802715,0.00022457894],"domain_scores_gemma":[0.9993471,0.00046116707,0.000073534,0.00004893253,0.000043009804,0.000026284128],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000304582,0.00010901229,0.00019097568,0.000027834087,0.00014709275,0.0000126637215,0.000168073,0.00012740289,0.000021115005],"category_scores_gemma":[0.00004686113,0.00003883106,0.000029728857,0.00013043055,0.00009004266,0.000011753258,0.00005265894,0.00005803818,0.0000011543693],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0016417474,0.00018950191,0.27398735,0.00024286659,0.000115020855,0.0000051531424,0.00073304283,0.000005607744,0.63436866,0.010867169,0.010703775,0.06714008],"study_design_scores_gemma":[0.0018058751,0.0004195791,0.56277037,0.00025801093,0.000036678037,0.000020131267,0.0023201026,0.00009580683,0.08807716,0.003041778,0.34062338,0.00053111796],"about_ca_topic_score_codex":0.00010403954,"about_ca_topic_score_gemma":0.009563323,"teacher_disagreement_score":0.54629153,"about_ca_system_score_codex":0.000010695585,"about_ca_system_score_gemma":0.000034147793,"threshold_uncertainty_score":0.5336559},"labels":[],"label_agreement":null},{"id":"W4412015385","doi":"10.1186/s12870-025-06893-0","title":"Metabolic reallocation in soybeans under shade stress alters phenylpropanoid profiles with implications for stress adaptation and seed composition","year":2025,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Soybean genetics and cultivation","field":"Agricultural and Biological Sciences","cited_by":10,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ministry of Agriculture","funders":"National Natural Science Foundation of China","keywords":"Biology; Phenylpropanoid; Adaptation (eye); Composition (language); Stress (linguistics); Drought stress; Botany; Biochemistry; Neuroscience; Enzyme; Biosynthesis","score_opus":0.03484637299061917,"score_gpt":0.24905355382704839,"score_spread":0.2142071808364292,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4412015385","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9935578,0.00018639873,0.0037373588,0.0011725641,0.000034401208,0.0005861989,0.0006439785,0.000026565966,0.00005471181],"genre_scores_gemma":[0.99485666,0.00006591419,0.0008987188,0.00012243375,0.000042324744,0.00019338174,0.0037965598,8.4903263e-7,0.000023180992],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9993594,0.000060704475,0.00015869572,0.00024691338,0.000030000192,0.00014425881],"domain_scores_gemma":[0.99964046,0.0001636144,0.00007588339,0.00003885554,0.000057075897,0.000024076577],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00007595256,0.00009285804,0.00011958015,0.000030207937,0.00011574993,0.000024767583,0.000074248026,0.00007963792,0.0000024474414],"category_scores_gemma":[0.000010025032,0.00004108513,0.000017372671,0.00017550401,0.00004647875,0.000043311968,0.000015853859,0.000039041755,4.066195e-7],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015932371,0.0001041841,0.3348195,0.000026582922,0.000020598787,6.0030395e-8,0.0001296034,0.00042232897,0.62100303,0.03342259,0.000021421678,0.009870759],"study_design_scores_gemma":[0.00032777787,0.00011564907,0.9791773,0.00003732631,0.000019402267,0.0000013474371,0.00072534574,0.001723908,0.015466846,0.0021754291,0.00012856929,0.000101077094],"about_ca_topic_score_codex":0.00026762372,"about_ca_topic_score_gemma":0.0048048757,"teacher_disagreement_score":0.64435786,"about_ca_system_score_codex":0.000014751256,"about_ca_system_score_gemma":0.000016856955,"threshold_uncertainty_score":0.26812336},"labels":[],"label_agreement":null},{"id":"W4412517578","doi":"10.1186/s12870-025-06694-5","title":"Comparative proteomic analysis of self-compatible and self-incompatible genotypes of fennel (Foeniculum vulgare Mill.)","year":2025,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Plant Reproductive Biology","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Concordia University","funders":"Shahrekord University; Iran National Science Foundation; Concordia University; National Science Foundation","keywords":"Foeniculum; Biology; Biotechnology; Botany; Mill; Agronomy","score_opus":0.012162508460431496,"score_gpt":0.2621788932985259,"score_spread":0.2500163848380944,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4412517578","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9955079,0.0019120439,0.00064445264,0.000026421018,0.000117965785,0.00044750585,0.0007523653,0.000026533246,0.0005648089],"genre_scores_gemma":[0.9923183,0.00030807962,0.005938952,0.000038144244,0.00004105992,0.00003561086,0.0012326511,0.000006920055,0.00008033137],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9982187,0.00031048816,0.0004816986,0.0006489496,0.000057244222,0.00028287803],"domain_scores_gemma":[0.9989046,0.00010383376,0.00032438745,0.00044436485,0.0001728962,0.0000499194],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002910963,0.00024240305,0.0008602283,0.00037191456,0.00005786836,0.000004568215,0.00027496333,0.0002797467,0.0000107314245],"category_scores_gemma":[0.00007127212,0.00020321898,0.0001448061,0.00043940797,0.00022378966,0.000003827331,0.0002131107,0.00009696631,0.0000020669852],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002651538,0.00020395473,0.29689577,0.00009073955,0.0019541704,6.1724324e-7,0.0001406527,0.00009497637,0.6994546,0.000536807,0.0003318632,0.000030684398],"study_design_scores_gemma":[0.0007627412,0.0006489536,0.26874632,0.00002323727,0.00078670343,0.000017304576,0.00010360842,0.0012541628,0.72394556,0.00017520263,0.0032539757,0.00028221865],"about_ca_topic_score_codex":0.00020168198,"about_ca_topic_score_gemma":0.00072042464,"teacher_disagreement_score":0.028149458,"about_ca_system_score_codex":0.000020301966,"about_ca_system_score_gemma":0.00017807203,"threshold_uncertainty_score":0.828703},"labels":[],"label_agreement":null},{"id":"W4412520743","doi":"10.1186/s12870-025-06947-3","title":"Identification of Rcr12, a single dominant clubroot resistance gene near Rcr6 on chromosome B3 of Brassica nigra","year":2025,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Plant Disease Resistance and Genetics","field":"Agricultural and Biological Sciences","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan; Agriculture and Agri-Food Canada","funders":"Leibniz-Gemeinschaft; Agriculture and Agri-Food Canada; Sugar Research and Development Corporation; University of Alberta","keywords":"Biology; Clubroot; Genetics; Locus (genetics); Bulked segregant analysis; Leptosphaeria maculans; Gene; Brassica; Gene mapping; Chromosome; Botany","score_opus":0.016864342273973636,"score_gpt":0.23074116716732795,"score_spread":0.21387682489335433,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4412520743","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99604726,0.0010443843,0.000023473849,0.00025679756,0.0001394691,0.00018602112,0.0017662394,0.000017196251,0.00051915465],"genre_scores_gemma":[0.99856347,0.00025196598,0.00008939637,0.000070673996,0.000048637412,0.000013021812,0.00040473626,7.499307e-7,0.00055733434],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9988213,0.000116279305,0.00042847643,0.00030328997,0.00010657561,0.00022403467],"domain_scores_gemma":[0.99924904,0.0002894632,0.0002330885,0.00011978846,0.00006237759,0.000046230245],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001716456,0.00012967415,0.00030235533,0.00003002335,0.00009252749,0.000013203479,0.00027268508,0.00013925524,0.00002235364],"category_scores_gemma":[0.00008772354,0.000056833458,0.00010212423,0.00030605614,0.00017188025,0.000022570413,0.000042612945,0.000057359855,0.00001065],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00035106452,0.00020216919,0.006167298,0.000052743653,0.000020878517,0.000002106699,0.000011899914,0.0000053463955,0.9894025,0.0010282362,0.0012674256,0.0014883513],"study_design_scores_gemma":[0.00030169214,0.00029774572,0.21749595,0.00014976732,0.000039118888,0.000002881639,0.000044332817,0.000058599537,0.76110274,0.0011707479,0.019155601,0.00018085074],"about_ca_topic_score_codex":0.00004305807,"about_ca_topic_score_gemma":0.0014145147,"teacher_disagreement_score":0.22829977,"about_ca_system_score_codex":0.000019265139,"about_ca_system_score_gemma":0.000037422345,"threshold_uncertainty_score":0.23176011},"labels":[],"label_agreement":null},{"id":"W4412708378","doi":"10.1186/s12870-025-07007-6","title":"Candidate gene identification and marker development for seed coat peeling rate in peanut (Arachis Hypogaea L.)","year":2025,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Peanut Plant Research Studies","field":"Agricultural and Biological Sciences","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ministry of Agriculture","funders":"National Key Research and Development Program of China; Henan Academy of Agricultural Sciences","keywords":"Biology; Quantitative trait locus; Single-nucleotide polymorphism; Genetics; Linkage disequilibrium; Arachis hypogaea; Candidate gene; Population; Genome-wide association study; Locus (genetics); Arachis; Genetic linkage; Genotype; Gene; Agronomy","score_opus":0.03306986253023195,"score_gpt":0.2675467696333712,"score_spread":0.23447690710313926,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4412708378","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99755245,0.0005293953,0.000089614856,0.0008126547,0.000100308236,0.0003691985,0.00040555059,0.000025555531,0.00011526754],"genre_scores_gemma":[0.9950084,0.0004196651,0.00039047646,0.0001189893,0.00005535446,0.000105672625,0.002803117,2.9457405e-7,0.0010980207],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9989091,0.00013991166,0.00026275494,0.0003259441,0.000047886224,0.00031437443],"domain_scores_gemma":[0.99909985,0.0007231209,0.00006231063,0.000036491052,0.000040129773,0.000038108246],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00081283477,0.000114571056,0.0001885411,0.000045775418,0.00020708385,0.00003303535,0.00014266129,0.000076109216,0.000008376197],"category_scores_gemma":[0.00021077773,0.000047769867,0.00002566941,0.000143012,0.000060206126,0.00003847978,0.000121622565,0.00007237541,0.000001983945],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00024381076,0.000031610172,0.23627819,0.00003455617,0.000025530586,0.0000036689976,0.00006184959,0.0000017179553,0.7543073,0.00024432712,0.0007760344,0.007991358],"study_design_scores_gemma":[0.0003193806,0.000041363193,0.95606124,0.0000289113,0.0000065048607,0.000004112641,0.00013664465,0.00030467697,0.01699322,0.00039114282,0.025575396,0.00013737651],"about_ca_topic_score_codex":0.00024963735,"about_ca_topic_score_gemma":0.0089182835,"teacher_disagreement_score":0.7373141,"about_ca_system_score_codex":0.00003773817,"about_ca_system_score_gemma":0.00002778818,"threshold_uncertainty_score":0.49766117},"labels":[],"label_agreement":null},{"id":"W4412729069","doi":"10.1186/s12870-025-06929-5","title":"The path effects of a bacterial signal compound on the microbiome of canola","year":2025,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Plant-Microbe Interactions and Immunity","field":"Agricultural and Biological Sciences","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Agriculture and Agri-Food Canada; McGill University","funders":"Custody X Change","keywords":"Biology; Canola; Path (computing); Microbiome; Computational biology; SIGNAL (programming language); Biotechnology; Genetics; Botany; Computer science","score_opus":0.01383599354564776,"score_gpt":0.21326341148589087,"score_spread":0.1994274179402431,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4412729069","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9981258,0.00011682947,0.0000025314857,0.00028547968,0.00040937343,0.0001498655,0.0005236286,0.0000067823867,0.0003797095],"genre_scores_gemma":[0.9994993,0.000055048742,0.0000071318345,0.000099562996,0.000039821905,0.0000070717565,0.00015060802,2.3973277e-7,0.00014121117],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9993134,0.00025114487,0.00017651894,0.00009625542,0.000025794789,0.00013688306],"domain_scores_gemma":[0.99689186,0.0028988481,0.00010826407,0.00006056939,0.000029232568,0.000011212999],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00017070225,0.000077486504,0.00014475008,0.000010693467,0.00018253367,0.000013166927,0.00029468237,0.00006825971,0.000059276244],"category_scores_gemma":[0.000060723596,0.000019175606,0.0000659873,0.0001088538,0.00015123509,0.0000114805425,0.000067310255,0.000097015596,0.0000057831426],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00018281008,0.00005887777,0.0010251456,0.000007729621,0.000024773228,4.7462694e-7,0.0000128024,1.486965e-7,0.9932522,0.0015238365,0.0023192896,0.0015919239],"study_design_scores_gemma":[0.0002647747,0.0007077059,0.074199826,0.00014741276,0.000021905034,0.00002637234,0.00015728443,0.000016080472,0.798332,0.00043291633,0.12558033,0.00011343014],"about_ca_topic_score_codex":0.0007965435,"about_ca_topic_score_gemma":0.0014043157,"teacher_disagreement_score":0.19492023,"about_ca_system_score_codex":0.000009806765,"about_ca_system_score_gemma":0.000017640561,"threshold_uncertainty_score":0.14039198},"labels":[],"label_agreement":null},{"id":"W4412729615","doi":"10.1186/s12870-025-07039-y","title":"Genome-wide association study of pre-harvest sprouting resistance and grain color in common wheat (Triticum aestivum L.)","year":2025,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Seed Germination and Physiology","field":"Agricultural and Biological Sciences","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ministry of Agriculture","funders":"Earmarked Fund for China Agriculture Research System","keywords":"Biology; Quantitative trait locus; Single-nucleotide polymorphism; Genome-wide association study; Genetics; Candidate gene; Tassel; Association mapping; Population; Cultivar; SNP; Allele; Genetic association; Genetic variation; Gene; Horticulture; Agronomy; Genotype","score_opus":0.017852292023126028,"score_gpt":0.2521474129380618,"score_spread":0.2342951209149358,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4412729615","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9983666,0.00016928626,0.0000017627832,0.0005248158,0.000109685825,0.00034276213,0.00008662286,0.000017963153,0.0003804807],"genre_scores_gemma":[0.9989627,0.000017024004,0.000019899104,0.0001727037,0.000026422924,0.000025497158,0.000116190495,4.0327745e-7,0.0006591544],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9988803,0.00036993658,0.00028418604,0.00023129431,0.00004514383,0.00018909336],"domain_scores_gemma":[0.99843407,0.0013302205,0.00013774382,0.000037673173,0.000037104724,0.00002316751],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00039577502,0.00008911503,0.00026191442,0.00003263718,0.00007448452,0.000007933414,0.000115776624,0.0001316667,0.000011512378],"category_scores_gemma":[0.0003241178,0.000042060543,0.000021022564,0.00024313519,0.000042037376,0.000030097364,0.00006058184,0.0000974514,0.0000014844837],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013688616,0.00017294135,0.93308634,0.000016733165,0.0000072671287,0.0000011302454,0.00013156768,0.0000023863695,0.06564229,0.00043046148,0.00009300623,0.00027899336],"study_design_scores_gemma":[0.00036800496,0.0002900163,0.99591666,0.00001799899,0.0000071605136,3.8358758e-7,0.0005213848,0.000028611898,0.00038129627,0.00074706133,0.0016471943,0.00007425184],"about_ca_topic_score_codex":0.00040433963,"about_ca_topic_score_gemma":0.020219276,"teacher_disagreement_score":0.065261,"about_ca_system_score_codex":0.0000397557,"about_ca_system_score_gemma":0.000011044426,"threshold_uncertainty_score":0.99765915},"labels":[],"label_agreement":null},{"id":"W4412730262","doi":"10.1186/s12870-025-06767-5","title":"Transcriptome-based analysis reveals key molecular mechanisms and functional characterization of MaCAX3 gene involved in manganese stress responses in mulberry plants","year":2025,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Plant Stress Responses and Tolerance","field":"Agricultural and Biological Sciences","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ministry of Agriculture","funders":"Natural Science Foundation of Jiangsu Province; Government of Jiangsu Province","keywords":"Biology; Transcriptome; Reactive oxygen species; Gene; Biochemistry; Lignin; Toxicity; Hemicellulose; Abiotic stress; Gene expression; Botany; Chemistry","score_opus":0.02012182148594678,"score_gpt":0.22581587169539105,"score_spread":0.20569405020944426,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4412730262","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99543333,0.00020353406,0.00038180937,0.00016838849,0.00005867512,0.0001793371,0.0035478764,0.000013541107,0.000013506325],"genre_scores_gemma":[0.9966509,0.0001411094,0.00010963315,0.00019866573,0.0000097834645,0.000026141557,0.002811694,6.8496536e-7,0.00005143293],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9987242,0.0003365184,0.0003282175,0.0003196128,0.0000799049,0.000211514],"domain_scores_gemma":[0.9994009,0.00038798654,0.00010037727,0.000053178577,0.000021385973,0.00003616934],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00021245363,0.00013798829,0.00035850372,0.00021425096,0.000036543548,0.000010884418,0.00011392564,0.00016963846,0.000040256975],"category_scores_gemma":[0.000036289584,0.00006869034,0.00006095554,0.000552201,0.00004912896,0.00003680998,0.000024333358,0.000077177174,6.3853656e-7],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0012354401,0.00007411781,0.25492343,0.000015901302,0.000027650069,0.000017955834,0.000012828268,0.00006321575,0.7429379,0.0004192982,0.0000012845089,0.00027095724],"study_design_scores_gemma":[0.00043185553,0.00006931162,0.91445047,0.00005835478,0.00002474822,0.0000026755154,0.00003242667,0.001137205,0.083368585,0.00020993472,0.0001009228,0.000113527094],"about_ca_topic_score_codex":0.00044198733,"about_ca_topic_score_gemma":0.0056549935,"teacher_disagreement_score":0.6595693,"about_ca_system_score_codex":0.00001494543,"about_ca_system_score_gemma":0.00001958625,"threshold_uncertainty_score":0.31556192},"labels":[],"label_agreement":null},{"id":"W4412849438","doi":"10.1186/s12870-025-06996-8","title":"Analysis of thaumatin-like protein (TLP) gene family in tea plant revealed that CsTLP8 contributes to tea blister blight resistance","year":2025,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Plant-Microbe Interactions and Immunity","field":"Agricultural and Biological Sciences","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ministry of Agriculture","funders":"Guizhou Academy of Agricultural Sciences","keywords":"Biology; Thaumatin; Gene; Blight; Camellia sinensis; Resistance (ecology); Plant disease resistance; Genetics; Biotechnology; Botany; Agronomy","score_opus":0.030465522915657982,"score_gpt":0.246444336512336,"score_spread":0.215978813596678,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4412849438","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9929827,0.00056388095,0.00006466693,0.0007682331,0.00017738921,0.00046792286,0.003885236,0.000032139145,0.0010578658],"genre_scores_gemma":[0.995356,0.00006918602,0.00019948657,0.0005559188,0.000021758802,0.00006929165,0.0016965155,9.074635e-7,0.0020309328],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9983148,0.0003230851,0.00052009954,0.00039451013,0.000079928606,0.00036760105],"domain_scores_gemma":[0.99891996,0.0005942312,0.00020145607,0.00015909571,0.0000737187,0.000051556905],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00043211484,0.00020185846,0.0006218583,0.00024654975,0.00012958022,0.000035531302,0.00044647424,0.00020114143,0.000075826145],"category_scores_gemma":[0.0001271866,0.00008619561,0.00015403028,0.0012218319,0.00007617545,0.00006546259,0.00014689565,0.000191405,0.000015686319],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00044258017,0.00013022388,0.14147459,0.000015252012,0.00014101416,0.000004502227,0.000028181985,0.00000483761,0.8537948,0.00039630893,0.0032324588,0.00033526067],"study_design_scores_gemma":[0.00034892283,0.000114823655,0.8521085,0.0002019572,0.000113997026,0.000004640444,0.00023478325,0.000064259984,0.07525842,0.000119386095,0.071192265,0.00023806523],"about_ca_topic_score_codex":0.0021252043,"about_ca_topic_score_gemma":0.044424694,"teacher_disagreement_score":0.7785364,"about_ca_system_score_codex":0.000057390756,"about_ca_system_score_gemma":0.000028866374,"threshold_uncertainty_score":0.9730121},"labels":[],"label_agreement":null},{"id":"W4413499620","doi":"10.1186/s12870-025-06644-1","title":"Impact of Foliar Spray of Salicylic Acid on Morpho-Physiological and Biochemical Responses of Pea (Pisum sativum L.) under Drought Stress","year":2025,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Plant Micronutrient Interactions and Effects","field":"Agricultural and Biological Sciences","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Carleton University","funders":"King Saud University","keywords":"Biology; Pisum; Sativum; Salicylic acid; Morpho; Drought stress; Botany; Horticulture; Agronomy; Biochemistry","score_opus":0.028783582065698816,"score_gpt":0.2896363492992837,"score_spread":0.2608527672335849,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4413499620","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9968657,0.0002818258,0.0000099506115,0.00008957847,0.00007442836,0.00014202688,0.0024197313,0.000012753435,0.000104023675],"genre_scores_gemma":[0.99942005,0.0001316017,0.000045586938,0.00003407645,0.00003373138,0.000005745018,0.00027103233,6.0434087e-7,0.000057583664],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9989501,0.000217,0.0003001797,0.00025514275,0.000056136156,0.00022144665],"domain_scores_gemma":[0.99854136,0.001118692,0.00018203742,0.00007273612,0.000039329963,0.000045821766],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001413208,0.0001515293,0.00040132026,0.000053164964,0.000039880862,0.000004527841,0.0001656886,0.00019652567,0.00006398989],"category_scores_gemma":[0.00013731536,0.00005547614,0.00014250692,0.00017792788,0.00021448283,0.000025225232,0.00008548965,0.00010689454,0.0000023788689],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0011513067,0.00025007996,0.04499017,0.000029320128,0.000054934935,0.0000010481388,0.000008573178,0.0000034537018,0.9505606,0.0017937638,0.0009592713,0.00019744803],"study_design_scores_gemma":[0.00023368209,0.001116708,0.42299613,0.00011196552,0.000017681477,0.000012499161,0.000045004697,0.000014740558,0.57469445,0.00041821314,0.0002454022,0.00009352329],"about_ca_topic_score_codex":0.000360332,"about_ca_topic_score_gemma":0.00009561701,"teacher_disagreement_score":0.37800595,"about_ca_system_score_codex":0.00001845195,"about_ca_system_score_gemma":0.000023906943,"threshold_uncertainty_score":0.22622512},"labels":[],"label_agreement":null},{"id":"W4413612466","doi":"10.1186/s12870-025-06601-y","title":"Natural variation and functional analysis of TaSD6 genes regulating seed dormancy in common wheat","year":2025,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Seed Germination and Physiology","field":"Agricultural and Biological Sciences","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ministry of Agriculture","funders":"Jiangsu Collaborative Innovation Center for Modern Crop Production; National Natural Science Foundation of China","keywords":"Biology; Dormancy; Variation (astronomy); Gene; Seed dormancy; Common wheat; Genetic variation; Biotechnology; Botany; Agronomy; Genetics; Germination","score_opus":0.01888759671489218,"score_gpt":0.238540957085226,"score_spread":0.2196533603703338,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4413612466","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99904406,0.00035165774,0.000011334336,0.00018296418,0.00012727949,0.000058367972,0.00006483439,0.0000115361645,0.00014797994],"genre_scores_gemma":[0.9988771,0.000030432215,0.000052527143,0.00010508231,0.000030380397,0.000004772207,0.00079920795,1.6281136e-7,0.00010035241],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9993965,0.00011850747,0.00019603038,0.00016079021,0.000029082514,0.00009909335],"domain_scores_gemma":[0.99945146,0.00040877616,0.00007397598,0.000026928172,0.00002607851,0.000012801396],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013429116,0.00006242842,0.00020475234,0.00008389119,0.000047249127,0.0000048387983,0.000049747057,0.000093593306,0.000049097107],"category_scores_gemma":[0.000023462915,0.00002634735,0.000040868188,0.0005536279,0.000039875802,0.000027349666,0.00003394691,0.000051426883,8.3962783e-7],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006668217,0.000019131236,0.38665912,0.000005299188,0.000039865223,1.2500736e-7,0.000029774419,0.00006419409,0.60624456,0.0023727678,0.000018150175,0.0044803414],"study_design_scores_gemma":[0.000120156954,0.00003523131,0.9904287,0.0000061981004,0.00003503012,0.0000011760901,0.000044759618,0.006890676,0.0012805266,0.0008843305,0.00022320809,0.000050007515],"about_ca_topic_score_codex":0.0004045739,"about_ca_topic_score_gemma":0.0022823059,"teacher_disagreement_score":0.604964,"about_ca_system_score_codex":0.000008993622,"about_ca_system_score_gemma":0.0000066333514,"threshold_uncertainty_score":0.12735802},"labels":[],"label_agreement":null},{"id":"W4414662162","doi":"10.1186/s12870-025-07259-2","title":"Alternative splicing occurs in auxin-mediated trade-off between fruit development and quality in tomato","year":2025,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Plant Molecular Biology Research","field":"Agricultural and Biological Sciences","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"National Key Research and Development Program of China; Huazhong Agricultural University; National Natural Science Foundation of China; Ministry of Education, Culture, Sports, Science and Technology","keywords":"Quality (philosophy); Fruit set; Alternative splicing; Set (abstract data type); Plant development; Selection (genetic algorithm)","score_opus":0.06781312496772468,"score_gpt":0.31908274322066726,"score_spread":0.2512696182529426,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4414662162","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99831986,0.00028684372,0.00001070054,0.00050640857,0.000051363168,0.00026967007,0.00027559014,0.000027167303,0.00025237468],"genre_scores_gemma":[0.99870735,0.00005049211,0.00011283805,0.00022213407,0.000026951711,0.000029595369,0.00081759336,5.6276673e-7,0.00003246977],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99818283,0.00050064037,0.0003778068,0.00043115864,0.00007320444,0.0004343668],"domain_scores_gemma":[0.99847794,0.001336322,0.00006562793,0.000045148747,0.000010509285,0.00006443984],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000783455,0.00015216936,0.0003501135,0.000087538094,0.00006481784,0.000013927954,0.000264657,0.00024757042,0.000012264376],"category_scores_gemma":[0.0002336546,0.0000673163,0.000025735826,0.00035564488,0.000108114415,0.000027425978,0.00016818813,0.00023803106,0.000011679639],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000067240915,0.000033547618,0.88441145,0.000009896536,0.000015114569,0.00002015965,0.00008313198,7.5826273e-7,0.10411171,0.0006049709,0.000025153744,0.010616843],"study_design_scores_gemma":[0.0003554944,0.000060662816,0.9852135,0.000046999077,0.0000019576921,0.0000070385136,0.00010942112,0.00004625179,0.011020941,0.00032874622,0.0026585513,0.00015039531],"about_ca_topic_score_codex":0.001317812,"about_ca_topic_score_gemma":0.023694288,"teacher_disagreement_score":0.100802064,"about_ca_system_score_codex":0.0000577694,"about_ca_system_score_gemma":0.000048294056,"threshold_uncertainty_score":0.9941207},"labels":[],"label_agreement":null},{"id":"W4414702550","doi":"10.1186/s12870-025-07270-7","title":"Ascophyllum nodosum based plant biostimulant shapes the bacterial community in the rhizosphere of corn","year":2025,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Plant Growth Enhancement Techniques","field":"Agricultural and Biological Sciences","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"National Research Council Canada; Dalhousie University","funders":"Natural Sciences and Engineering Research Council of Canada; Mitacs","keywords":"Rhizosphere; Ascophyllum; Microbiome; Plant root; Root (linguistics); Microbial population biology; Soil bacteria; Plant roots","score_opus":0.03545028480198615,"score_gpt":0.24781258809221396,"score_spread":0.21236230329022782,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4414702550","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99545044,0.00007943948,0.00004369271,0.00095237495,0.00016951196,0.00045494817,0.0017879761,0.000058550413,0.001003083],"genre_scores_gemma":[0.997804,0.000036559795,0.000102008,0.0007940591,0.000061557774,0.00004668088,0.001130395,6.76481e-7,0.000024054696],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99810505,0.000982374,0.0003400843,0.00018651148,0.00009629128,0.0002897097],"domain_scores_gemma":[0.9969882,0.0026963975,0.00013880747,0.00013287291,0.000024438104,0.000019320425],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009095925,0.00016967514,0.00027726463,0.000021216996,0.00021340251,0.000024835914,0.0010233809,0.00016874803,0.0001423482],"category_scores_gemma":[0.00013077504,0.000047732403,0.00007643095,0.00030328752,0.00020005947,0.000030015332,0.0001457732,0.00030214063,0.000008103104],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005353317,0.00028378022,0.056755792,0.00003545384,0.000020796153,0.000005254503,0.00008939974,0.00000342649,0.93275917,0.0024768834,0.0049881013,0.0020465867],"study_design_scores_gemma":[0.0010091923,0.0013895753,0.81949514,0.00036363595,0.000054830158,0.00003359913,0.0009855891,0.0012639329,0.12532979,0.0026739524,0.0468813,0.0005194608],"about_ca_topic_score_codex":0.0020694418,"about_ca_topic_score_gemma":0.012669305,"teacher_disagreement_score":0.8074294,"about_ca_system_score_codex":0.000016618547,"about_ca_system_score_gemma":0.000029098028,"threshold_uncertainty_score":0.70697695},"labels":[],"label_agreement":null},{"id":"W4414931723","doi":"10.1186/s12870-025-07265-4","title":"A LjBAK1-associated E3 ubiquitin ligase, LjPUB7, negatively regulates early symbiosis by targeting NFRs","year":2025,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Legume Nitrogen Fixing Symbiosis","field":"Agricultural and Biological Sciences","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Institute of Genetics; State Key Laboratory of Agricultural Microbiology; Institute of Genetics and Developmental Biology, Chinese Academy of Sciences; Chinese Academy of Sciences","keywords":"Ubiquitin ligase; Ubiquitin; Regulator; Cullin; Ubiquitin-Protein Ligases; Nod; Signal transduction; Mutant; Lotus japonicus","score_opus":0.01122972336695798,"score_gpt":0.21195900763049902,"score_spread":0.20072928426354103,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4414931723","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99435854,0.00061336235,0.0000018946135,0.0014291679,0.00024355634,0.00029655598,0.0014434572,0.0002923351,0.0013211314],"genre_scores_gemma":[0.9959438,0.000028388022,0.00018442584,0.00077829475,0.00011395758,0.00004979198,0.0015840435,0.0000027598144,0.0013145288],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9975406,0.0004095185,0.00048751972,0.0006697816,0.00013387974,0.0007586916],"domain_scores_gemma":[0.99838704,0.0010410586,0.0002532739,0.00009211742,0.00010612288,0.00012039652],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00047351117,0.00032550984,0.0004671566,0.00004572766,0.00037015034,0.00008662392,0.00053935655,0.00045537838,0.00022523981],"category_scores_gemma":[0.0005704882,0.00014511404,0.00018810584,0.00058980344,0.00018266834,0.000106042644,0.00020579531,0.00024385116,0.00011212915],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006202702,0.0001063739,0.11032227,0.000008684514,0.00008838523,0.0000029215173,0.0000548997,4.683636e-8,0.86645985,0.00084052456,0.020479722,0.0015742917],"study_design_scores_gemma":[0.0006158996,0.0004887964,0.26452565,0.00013828737,0.00008124138,0.0000076012093,0.00024139474,0.00003940325,0.72211194,0.002927627,0.008143677,0.00067850034],"about_ca_topic_score_codex":0.0017997546,"about_ca_topic_score_gemma":0.0006493222,"teacher_disagreement_score":0.15420339,"about_ca_system_score_codex":0.000092989256,"about_ca_system_score_gemma":0.00003295433,"threshold_uncertainty_score":0.5917579},"labels":[],"label_agreement":null},{"id":"W4415379470","doi":"10.1186/s12870-025-07284-1","title":"Identification of PP2C gene family and its role in stress and adversity based on T2T flax (Linum usitatissimum L.) genome","year":2025,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Phytoestrogen effects and research","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia, Okanagan Campus","funders":"","keywords":"Gene family; Subfamily; Gene; Gene duplication; Genome; Linum; Abiotic stress; Promoter; Gene expression profiling","score_opus":0.017512679016494233,"score_gpt":0.2912109999554709,"score_spread":0.27369832093897667,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4415379470","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9976526,0.0012765318,0.0001443954,0.00010411824,0.000044359334,0.00028929842,0.00031909693,0.0000070528736,0.00016257653],"genre_scores_gemma":[0.9994245,0.0001319515,0.00008085052,0.00006905068,0.000016503061,0.000006596445,0.00016507244,0.0000029212788,0.00010253475],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.999344,0.00010363255,0.00015014723,0.00020380307,0.000056745488,0.00014166124],"domain_scores_gemma":[0.9995768,0.00019360674,0.000042008993,0.000106832216,0.00003293538,0.00004779005],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00022852831,0.00007080684,0.00020030167,0.00020213742,0.000031673164,0.0000034438408,0.000047898062,0.00009736164,0.0000044930443],"category_scores_gemma":[0.000073428084,0.000054999735,0.000017275894,0.000103157734,0.000061389444,0.000014776436,0.00004081877,0.00009695847,0.000002159332],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00048349815,0.00010121112,0.23206943,0.00024536313,0.000020212514,0.00001364596,0.00003768007,0.000041765157,0.7663046,0.00021283158,0.000015208843,0.0004545644],"study_design_scores_gemma":[0.0014404617,0.00030907532,0.9156658,0.00009294818,0.00002388479,0.000004461881,0.00006768964,0.01201616,0.07011203,0.000085761414,0.00012358294,0.000058167137],"about_ca_topic_score_codex":0.00005606769,"about_ca_topic_score_gemma":0.000060765527,"teacher_disagreement_score":0.69619256,"about_ca_system_score_codex":0.000020648762,"about_ca_system_score_gemma":0.00008882601,"threshold_uncertainty_score":0.22428241},"labels":[],"label_agreement":null},{"id":"W4415382633","doi":"10.1186/s12870-025-07405-w","title":"Metabolite accumulation contributes to differences in seed germination of water-saving and drought-resistance rice under dry direct seeding","year":2025,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Rice Cultivation and Yield Improvement","field":"Agricultural and Biological Sciences","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Kwantlen Polytechnic University","funders":"","keywords":"Germination; Seedling; Priming (agriculture); Metabolomics; Seeding; Metabolite","score_opus":0.040204669219723314,"score_gpt":0.2692689225379594,"score_spread":0.2290642533182361,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4415382633","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9978288,0.0002115567,0.00025961237,0.00093216397,0.00011038051,0.00019922348,0.000041256615,0.000016563785,0.0004004561],"genre_scores_gemma":[0.99906385,0.00003461973,0.00012028602,0.00024242362,0.000020404255,0.000016214997,0.00009947579,2.911712e-7,0.00040245734],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99931484,0.0000775847,0.00022270074,0.00019211185,0.00004190836,0.00015085415],"domain_scores_gemma":[0.9994604,0.00039529864,0.00005800044,0.000024233346,0.00004268141,0.0000193728],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002253962,0.000080139536,0.00018824752,0.00004542267,0.000064790445,0.000020812484,0.00007762064,0.000074675474,0.000007801471],"category_scores_gemma":[0.00009292889,0.000030441937,0.00002014172,0.0002191877,0.000025317306,0.00006079151,0.00004996108,0.000039443385,9.397521e-7],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000033241784,0.000018430823,0.25201353,0.000012852962,0.0000064111855,7.976874e-8,0.000062959894,0.0000022207723,0.74380153,0.0028100854,0.00000712906,0.0012315176],"study_design_scores_gemma":[0.00016553403,0.000027141245,0.9437937,0.000039447314,0.000006691651,7.391814e-8,0.00023310212,0.00012190331,0.053646907,0.0009461441,0.0009530756,0.00006624956],"about_ca_topic_score_codex":0.00028332957,"about_ca_topic_score_gemma":0.0015340958,"teacher_disagreement_score":0.6917802,"about_ca_system_score_codex":0.000018911513,"about_ca_system_score_gemma":0.000004790189,"threshold_uncertainty_score":0.124138616},"labels":[],"label_agreement":null},{"id":"W4415794017","doi":"10.1186/s12870-025-07263-6","title":"Genome-wide association study for agronomic and yield-related traits in spring wheat (Triticum aestivum L.) germplasm","year":2025,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Wheat and Barley Genetics and Pathology","field":"Agricultural and Biological Sciences","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Agriculture and Agri-Food Canada","funders":"Science and Engineering Research Board; Eternal University","keywords":"Germplasm; Spring (device); Quantitative trait locus; Allele; Genetic association; Plant breeding; Genetic variation; Genetic variability","score_opus":0.02173388510257777,"score_gpt":0.22795433718202754,"score_spread":0.20622045207944978,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4415794017","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9979971,0.0003262914,0.000017830936,0.0006031519,0.00020523867,0.00047109474,0.00009728151,0.000020922878,0.00026105338],"genre_scores_gemma":[0.9992792,0.000060062368,0.000054788343,0.0001464163,0.00005694194,0.000044506764,0.000057180194,6.694387e-7,0.0003002618],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99906325,0.000094301104,0.00024312353,0.00029263692,0.000025519754,0.0002811754],"domain_scores_gemma":[0.9988187,0.001046901,0.00005590723,0.000025844673,0.000019782796,0.00003288813],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00034336728,0.00011117204,0.00023386146,0.0000360826,0.000098585784,0.00001568038,0.00010011096,0.00020410697,0.00001676903],"category_scores_gemma":[0.00013438343,0.00005195992,0.000040395946,0.0001109944,0.000022790018,0.000019432478,0.000047529196,0.00009153544,0.000003964137],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000043929558,0.00008071497,0.8176615,0.000005836041,0.0000135577375,0.0000017427963,0.00004269178,0.0000043349296,0.18043002,0.00022624455,0.000048130507,0.0014412767],"study_design_scores_gemma":[0.00043487508,0.00038056576,0.99608135,0.0000108160375,0.000016539245,0.0000018870871,0.00011037281,0.000037157395,0.00043627864,0.0006781053,0.0017009244,0.00011112949],"about_ca_topic_score_codex":0.00020512499,"about_ca_topic_score_gemma":0.008833622,"teacher_disagreement_score":0.17999375,"about_ca_system_score_codex":0.00003218408,"about_ca_system_score_gemma":0.000011726753,"threshold_uncertainty_score":0.49293685},"labels":[],"label_agreement":null},{"id":"W4415914746","doi":"10.1186/s12870-025-07538-y","title":"Elucidating the growth-promoting factors of Bacillus amyloliquefaciens on rapeseed through metabolomics","year":2025,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Plant-Microbe Interactions and Immunity","field":"Agricultural and Biological Sciences","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ministry of Agriculture","funders":"Natural Science Foundation of Sichuan Province","keywords":"Metabolome; Metabolomics; Bacillus amyloliquefaciens; Flavonoid; Rhizobacteria; Rapeseed; Mechanism (biology)","score_opus":0.03590685937538737,"score_gpt":0.25399590248095305,"score_spread":0.21808904310556568,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4415914746","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99615437,0.00009593469,0.000058275356,0.00040670356,0.00033917426,0.00014895617,0.0005842789,0.00003598515,0.0021763258],"genre_scores_gemma":[0.9990391,0.000071668015,0.00010429724,0.0003029271,0.00004323195,0.0000059748495,0.0003119288,5.8232246e-7,0.000120304634],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99893594,0.00024231312,0.00029464794,0.00021660092,0.000049664657,0.0002608311],"domain_scores_gemma":[0.99831045,0.0013622076,0.00016561372,0.00008314047,0.000058212154,0.000020383513],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00027343366,0.00014517065,0.00024498906,0.00002029967,0.00030592267,0.000022643504,0.0003772983,0.0001241625,0.00008382887],"category_scores_gemma":[0.00031417914,0.00004444019,0.00011085273,0.0002610068,0.00012493208,0.00005974595,0.000115605995,0.00022834395,0.000010899839],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00005559076,0.00006816843,0.016705228,0.0000070373662,0.000036389738,4.4607827e-7,0.0001480076,0.0000028040533,0.9754935,0.00537468,0.00024852453,0.0018596253],"study_design_scores_gemma":[0.00026782494,0.0004387422,0.1335246,0.000088083696,0.00004496249,0.000027959351,0.0017432937,0.00018835551,0.8181037,0.0016773539,0.043597125,0.00029802622],"about_ca_topic_score_codex":0.0008421302,"about_ca_topic_score_gemma":0.0006842316,"teacher_disagreement_score":0.15738982,"about_ca_system_score_codex":0.000017599763,"about_ca_system_score_gemma":0.000016021846,"threshold_uncertainty_score":0.23529407},"labels":[],"label_agreement":null},{"id":"W4416193615","doi":"10.1186/s12870-025-07486-7","title":"QTL detection, validation, candidate genes and KASP markers for pre-harvest sprouting tolerance in white grained common wheat","year":2025,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Wheat and Barley Genetics and Pathology","field":"Agricultural and Biological Sciences","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Agriculture and Agri-Food Canada","funders":"Science and Engineering Research Board; University Grants Commission; Department of Science and Technology, Ministry of Science and Technology, India; Indian National Science Academy","keywords":"Candidate gene; Common wheat; Epistasis; Quantitative trait locus; Gene; White (mutation); Genetic marker","score_opus":0.015809960329787417,"score_gpt":0.2419033507369383,"score_spread":0.22609339040715087,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4416193615","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99774396,0.0005385812,0.00020037436,0.00051519927,0.0002569544,0.000340124,0.00020869156,0.000024124562,0.00017196288],"genre_scores_gemma":[0.99864626,0.00014136691,0.0002220659,0.00019705346,0.000109218534,0.000058931422,0.00034899978,7.693071e-7,0.00027534252],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.999076,0.000119049575,0.00023189264,0.00029501764,0.000025144054,0.00025290772],"domain_scores_gemma":[0.9996177,0.00021738283,0.000056250014,0.000043473145,0.000030366547,0.000034811626],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00028989871,0.00011868136,0.00020374308,0.000030008034,0.00016866878,0.00002936675,0.000105185914,0.00014493204,0.000012802811],"category_scores_gemma":[0.000033202665,0.000053658576,0.000035646757,0.00015360967,0.00006256936,0.000028095155,0.000043976263,0.0000621793,9.599484e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000243349,0.000021129788,0.58511245,0.00002737678,0.0000061579503,9.823696e-7,0.000037015943,0.000015924283,0.38915443,0.00027642353,0.00012615089,0.02497862],"study_design_scores_gemma":[0.00067076617,0.00045110137,0.93600327,0.00004253032,0.00001988828,0.000024179672,0.0001184981,0.000997475,0.044056352,0.0021989113,0.015156375,0.0002606552],"about_ca_topic_score_codex":0.00047277327,"about_ca_topic_score_gemma":0.024253426,"teacher_disagreement_score":0.35089082,"about_ca_system_score_codex":0.000010034959,"about_ca_system_score_gemma":0.000010364196,"threshold_uncertainty_score":0.99355143},"labels":[],"label_agreement":null},{"id":"W4416310048","doi":"10.1186/s12870-025-07592-6","title":"Genome-wide identification and functional analysis of U-box E3 ubiquitin ligases gene family related to drought stress response in Musa acuminata","year":2025,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Ubiquitin and proteasome pathways","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ministry of Agriculture","funders":"Guangdong Academy of Agricultural Sciences; Nanjing Agricultural University; Natural Science Foundation of Guangdong Province; National Natural Science Foundation of China","keywords":"Musa acuminata; Gene; Transcriptome; Gene expression profiling; Gene family; Arabidopsis; Gene expression; Phylogenetic tree; Genome; Oryza sativa","score_opus":0.015808150310016082,"score_gpt":0.25930551836014704,"score_spread":0.24349736805013095,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4416310048","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9949776,0.0012177239,0.0019218861,0.00013264485,0.00008963203,0.00024763157,0.0012524539,0.00001045703,0.00014995315],"genre_scores_gemma":[0.9952673,0.00021216024,0.00031996318,0.00020529337,0.000019709763,0.00005522673,0.0033204881,0.0000071646423,0.000592714],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9985091,0.00031649496,0.0004254704,0.0004765583,0.000059925325,0.00021242972],"domain_scores_gemma":[0.9992511,0.00018371477,0.00012218636,0.00031773298,0.00007116028,0.00005409807],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00058947207,0.00014699917,0.00028398348,0.00049346115,0.00004977527,0.0000116838755,0.00015808271,0.0002455174,0.000018707799],"category_scores_gemma":[0.00038284855,0.00014252728,0.000079316465,0.00054780475,0.00009194883,0.0000037991513,0.00016382923,0.000079362755,0.0000045654306],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0014290278,0.000054197084,0.07630265,0.000024026169,0.00020688245,0.0000032987996,0.0000570018,0.00018364524,0.92123884,0.00019995563,0.00008287479,0.00021758667],"study_design_scores_gemma":[0.00029754144,0.00013325579,0.47723612,0.00001382064,0.00008352021,0.0000032205442,0.00008803345,0.000067051056,0.5202887,0.00007162045,0.0016121548,0.00010493933],"about_ca_topic_score_codex":0.000051247873,"about_ca_topic_score_gemma":0.0002594939,"teacher_disagreement_score":0.40095013,"about_ca_system_score_codex":0.000019465793,"about_ca_system_score_gemma":0.00011123901,"threshold_uncertainty_score":0.5812094},"labels":[],"label_agreement":null},{"id":"W4416594753","doi":"10.1186/s12870-025-07686-1","title":"A novel protocol for protoplast isolation, transfection, and culture in Cannabis sativa L","year":2025,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Cannabis and Cannabinoid Research","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"","keywords":"Protoplast; Cannabis sativa; Genome; Protocol (science); Gene; Genome editing","score_opus":0.027107433181918314,"score_gpt":0.35080677997006954,"score_spread":0.3236993467881512,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4416594753","genre_codex":"protocol","genre_gemma":"protocol","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"protocol","genre_consensus":"protocol","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.07109979,0.00012332767,0.051195182,0.03651211,0.0002595287,0.8358639,0.0008051134,0.0001634227,0.0039776172],"genre_scores_gemma":[0.020658653,0.0000060962175,0.0019637528,0.0006065603,0.0001711754,0.95034117,0.00019647235,0.000017899261,0.026038202],"study_design_codex":"observational","study_design_gemma":"not_applicable","domain_scores_codex":[0.9991687,0.000036892397,0.00022300139,0.00027957387,0.000051440322,0.00024040884],"domain_scores_gemma":[0.99968326,0.00001691088,0.00002804027,0.000102641185,0.00011074191,0.000058392343],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00019973688,0.00011410527,0.00023041212,0.00019099684,0.00006781147,0.0000120396635,0.000044148044,0.00017737845,0.000025036305],"category_scores_gemma":[0.00015609177,0.00008164945,0.000044472647,0.00022451252,0.000082119266,0.000025975622,0.00001735655,0.00015498299,8.7180865e-7],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.007829898,0.00071043,0.3804903,0.0032213896,0.00008619349,0.0000059245585,0.0010426441,0.0000069637163,0.32191998,0.009296335,0.2694306,0.0059593325],"study_design_scores_gemma":[0.0088778045,0.0009785825,0.10783017,0.00020802925,0.00001570699,0.000114600356,0.000109444656,0.0006458524,0.007591912,0.00059717614,0.8728879,0.00014282059],"about_ca_topic_score_codex":0.0002641784,"about_ca_topic_score_gemma":0.002422978,"teacher_disagreement_score":0.6034573,"about_ca_system_score_codex":0.000060304785,"about_ca_system_score_gemma":0.00036229863,"threshold_uncertainty_score":0.3329568},"labels":[],"label_agreement":null},{"id":"W4416674041","doi":"10.1186/s12870-025-07757-3","title":"Genome-wide analysis of soybean MLPs reveals evolutionary and structural insights into drought, salt stress and ABA responses","year":2025,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Soybean genetics and cultivation","field":"Agricultural and Biological Sciences","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"Natural Science Foundation of Shandong Province","keywords":"Abscisic acid; Gene; Abiotic stress; Phylogenetic tree; Gene family; Gene expression profiling; Structural similarity; Phylogenetics; Gene cluster","score_opus":0.016390852465531618,"score_gpt":0.23862449944302408,"score_spread":0.22223364697749245,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4416674041","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99687004,0.0024705983,0.00001564041,0.0001494143,0.000045873978,0.000106692896,0.00025578088,0.000013739241,0.00007219541],"genre_scores_gemma":[0.99866045,0.0002187773,0.00020599099,0.00008987822,0.000034159366,0.0000049724226,0.000683026,4.0559277e-7,0.00010232145],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99917734,0.00014813509,0.00022565592,0.00026779025,0.000050864015,0.00013022767],"domain_scores_gemma":[0.9992446,0.00052084855,0.00009564306,0.000050545157,0.00004801714,0.000040403633],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000089568966,0.00010389826,0.00024054898,0.00007138664,0.00013825767,0.0000135915925,0.00010033837,0.000110704204,0.000024101268],"category_scores_gemma":[0.00009029246,0.000042740583,0.000045641784,0.00039677822,0.00013861798,0.00002923934,0.00008678111,0.000047353828,4.5127084e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009121304,0.000010781699,0.7667263,0.000012783494,0.00010822029,6.3251116e-7,0.00011277605,0.000004347844,0.23064068,0.0012162194,0.00002972356,0.0010462964],"study_design_scores_gemma":[0.00009045767,0.00010078552,0.9930367,0.000012561004,0.00008648266,0.0000013024413,0.00022384206,0.0002568148,0.0015842189,0.0039929487,0.00052277476,0.00009113606],"about_ca_topic_score_codex":0.00024924712,"about_ca_topic_score_gemma":0.0019129093,"teacher_disagreement_score":0.22905646,"about_ca_system_score_codex":0.000011181225,"about_ca_system_score_gemma":0.000010875908,"threshold_uncertainty_score":0.17429104},"labels":[],"label_agreement":null},{"id":"W4416787215","doi":"10.1186/s12870-025-07667-4","title":"Genome-wide identification of the peanut PITP gene family and functional verification of AhSFH8 in resistance to Aspergillus flavus infection","year":2025,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Plant-Microbe Interactions and Immunity","field":"Agricultural and Biological Sciences","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ministry of Agriculture","funders":"National Key Research and Development Program of China; Henan Academy of Agricultural Sciences; National Natural Science Foundation of China","keywords":"Gene; Aspergillus flavus; Subfamily; Gene family; Alternaria alternata; Fusarium oxysporum; Gene expression; Arachis","score_opus":0.02134839240127241,"score_gpt":0.2201934049091003,"score_spread":0.1988450125078279,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4416787215","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99861217,0.00016587909,0.00012593997,0.00023212109,0.00023410839,0.000156451,0.00022414057,0.000007189419,0.00024202952],"genre_scores_gemma":[0.9992165,0.00014967966,0.000032491374,0.000056764704,0.000017907238,0.000012455588,0.00020768367,2.9726652e-7,0.00030624823],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9993295,0.00012164528,0.00027630548,0.00015101505,0.000037283753,0.00008425667],"domain_scores_gemma":[0.99954295,0.00019124743,0.00012732713,0.00006782185,0.000058022426,0.000012623226],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00021292592,0.000060520055,0.00011086433,0.00004003883,0.00008214117,0.000007366873,0.000095716336,0.000067190216,0.000011160241],"category_scores_gemma":[0.00010850616,0.000026084666,0.00003188121,0.00027732388,0.000053969055,0.00003874624,0.000047225603,0.00006828057,0.0000028338],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000090875474,0.000035237754,0.10791697,0.000008152596,0.000005567307,4.611671e-8,0.000020332374,0.000018787674,0.8909707,0.0003217433,0.00009659388,0.0005150039],"study_design_scores_gemma":[0.00006594846,0.000029220271,0.905713,0.000019617883,0.000004997104,0.0000016619124,0.000050051018,0.000014224646,0.08870468,0.00018265832,0.0051738922,0.000040008177],"about_ca_topic_score_codex":0.000744595,"about_ca_topic_score_gemma":0.004678574,"teacher_disagreement_score":0.802266,"about_ca_system_score_codex":0.000029520521,"about_ca_system_score_gemma":0.000015144064,"threshold_uncertainty_score":0.2610754},"labels":[],"label_agreement":null},{"id":"W4417098663","doi":"10.1186/s12870-025-07678-1","title":"Comparative analysis of butternut (Juglans cinerea) and Japanese walnut (Juglans ailantifolia) chloroplast genomes","year":2025,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Plant and Fungal Interactions Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Natural Resources Canada; Canadian Forest Service","funders":"National Institute of Food and Agriculture","keywords":"Genome; Single-nucleotide polymorphism; Gene; Juglans; Ploidy; Genomics; Plant disease resistance; Canker; Comparative genomics","score_opus":0.02843108082046766,"score_gpt":0.3222869921581689,"score_spread":0.2938559113377013,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4417098663","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99081403,0.0013422754,0.0004025448,0.00005909658,0.00015425865,0.00014476482,0.0017825633,0.000011108793,0.0052893623],"genre_scores_gemma":[0.9929554,0.000717772,0.00012694631,0.00007683064,0.000068651214,0.000019220974,0.0034629542,0.00000463717,0.0025675846],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99886507,0.000119352895,0.00027705947,0.00039834442,0.000064745305,0.00027542366],"domain_scores_gemma":[0.9993338,0.00016148403,0.00009003449,0.0002630447,0.000087385495,0.00006425506],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014106683,0.00017632583,0.00046968038,0.00042635645,0.00007283122,0.000016269692,0.00020909093,0.00019163825,0.00004946146],"category_scores_gemma":[0.000045324367,0.00014428224,0.00012710644,0.00033669724,0.00017493435,0.0000042037154,0.00015337343,0.00012239497,0.000009553989],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005311859,0.00008091809,0.24784718,0.000038092745,0.0015509883,0.0000047893864,0.0001241047,0.000057943304,0.74667394,0.00047248404,0.0024839542,0.000134391],"study_design_scores_gemma":[0.0027310888,0.0012073093,0.38619688,0.00010567224,0.0017920386,0.00020048613,0.0016796087,0.010098363,0.41884288,0.00010341115,0.17596091,0.0010813768],"about_ca_topic_score_codex":0.00037032724,"about_ca_topic_score_gemma":0.0033720455,"teacher_disagreement_score":0.3278311,"about_ca_system_score_codex":0.000012433201,"about_ca_system_score_gemma":0.0000648665,"threshold_uncertainty_score":0.5883659},"labels":[],"label_agreement":null},{"id":"W4417187752","doi":"10.1186/s12870-025-07901-z","title":"Correction: Elucidating the growth-promoting factors of Bacillus amyloliquefaciens on rapeseed through metabolomics","year":2025,"lang":"en","type":"erratum","venue":"BMC Plant Biology","topic":"Nitrogen and Sulfur Effects on Brassica","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ministry of Agriculture","funders":"","keywords":"Bacillus amyloliquefaciens; Metabolomics; Rapeseed; Metabolome; Bacillus (shape)","score_opus":0.015331878163874185,"score_gpt":0.2556595122339722,"score_spread":0.24032763407009802,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4417187752","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.6058461,0.015950257,0.008028966,0.0009967625,0.1842511,0.00437983,0.010177644,0.0003523377,0.17001699],"genre_scores_gemma":[0.8415653,0.0041693295,0.0012461192,0.002417539,0.0056978236,0.00021483912,0.035165522,0.0002091432,0.109314375],"study_design_codex":"not_applicable","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99735516,0.0005981541,0.0005667681,0.0007974681,0.00015270805,0.0005297634],"domain_scores_gemma":[0.9981619,0.00043050197,0.00052183267,0.0006638145,0.00015898238,0.0000629685],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0004276565,0.00053854735,0.0007594485,0.00011433978,0.00024130502,0.000026562662,0.00067665195,0.0012143981,0.000027069478],"category_scores_gemma":[0.0012251396,0.00035918664,0.0004019865,0.0002226963,0.00031778542,0.000003717541,0.0002885823,0.0008342024,0.000008363075],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00047138057,0.00018932694,0.003108572,0.00032748628,0.0008251056,0.000007601783,0.00026352087,0.00001587101,0.34323555,0.0016856114,0.6487815,0.0010884722],"study_design_scores_gemma":[0.0006243204,0.000987328,0.0005910584,0.00020179474,0.00020442321,0.000054205266,0.00019701358,0.00020674909,0.5052006,0.00016956493,0.49088797,0.0006749272],"about_ca_topic_score_codex":0.000080617494,"about_ca_topic_score_gemma":0.00014734786,"teacher_disagreement_score":0.2357192,"about_ca_system_score_codex":0.000031850337,"about_ca_system_score_gemma":0.0004770013,"threshold_uncertainty_score":0.99988604},"labels":[],"label_agreement":null},{"id":"W4417449805","doi":"10.1186/s12870-025-07913-9","title":"Comparative and phylogenetic analyses based on the complete chloroplast genomes of Limonium (Plumbaginaceae) species","year":2025,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Genomics and Phylogenetic Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ministry of Agriculture","funders":"National Natural Science Foundation of China; Government of Xinjiang Uygur Autonomous Region of China","keywords":"Chloroplast; Genome; Phylogenetic tree; Phylogenetics; Phylogenetic relationship","score_opus":0.0653715615409578,"score_gpt":0.29279635769533385,"score_spread":0.22742479615437605,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4417449805","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9916405,0.004355503,0.0004496565,0.00023669707,0.000117459094,0.00020964186,0.0004290853,0.0000026461648,0.0025588179],"genre_scores_gemma":[0.99831104,0.0005658467,0.0003935705,0.00035314882,0.000055181292,0.000020842643,0.00010124233,0.0000055193295,0.00019359113],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9991166,0.00013016576,0.00020600195,0.00030829976,0.000043629938,0.00019531362],"domain_scores_gemma":[0.9993292,0.00020534707,0.00009658167,0.0002861525,0.00005546809,0.000027265487],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00011546397,0.00017785821,0.00031269857,0.00006940286,0.000116147254,0.000010120304,0.0001925773,0.00008692189,0.000009911299],"category_scores_gemma":[0.000032439963,0.00011878311,0.00007298112,0.00008870721,0.0004106748,2.463644e-7,0.00013634628,0.00005893581,0.0000021513436],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00017450465,0.00004066306,0.06495803,0.000022072729,0.00016426474,3.6676855e-7,0.000046371555,0.00032064898,0.9319888,0.0015186111,0.0006939054,0.00007181389],"study_design_scores_gemma":[0.00094965234,0.0010284473,0.54761195,0.000034109773,0.00011844992,0.000005281877,0.000537541,0.0014705897,0.38852113,0.00040796027,0.05896735,0.00034750788],"about_ca_topic_score_codex":0.000025542948,"about_ca_topic_score_gemma":0.00020863645,"teacher_disagreement_score":0.5434676,"about_ca_system_score_codex":0.000006025087,"about_ca_system_score_gemma":0.00006438012,"threshold_uncertainty_score":0.48438343},"labels":[],"label_agreement":null},{"id":"W7117365170","doi":"10.1186/s12870-025-07972-y","title":"Plant growth-promoting Bacillus strains modulate early soybean development via proteome remodeling","year":2025,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Plant-Microbe Interactions and Immunity","field":"Agricultural and Biological Sciences","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph; McGill University","funders":"","keywords":"Proteome; Secondary metabolism; Surfactin; Auxin; Bacillus (shape); Bacillus thuringiensis; Metabolic pathway; Proteomics","score_opus":0.03148772284795694,"score_gpt":0.22860991173895504,"score_spread":0.19712218889099808,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7117365170","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99739695,0.0000640264,0.00048359446,0.0002251948,0.00032972437,0.00030381192,0.00043988635,0.000112165995,0.0006446624],"genre_scores_gemma":[0.9971728,0.000021131662,0.0012335044,0.00015333689,0.000086858105,0.000025284326,0.0010046145,0.0000012383985,0.00030123896],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99851394,0.00014609375,0.00041614712,0.00038647235,0.00006983294,0.00046754227],"domain_scores_gemma":[0.9994957,0.00016645103,0.00012601203,0.00007598812,0.00006473877,0.00007109776],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003385943,0.00021576084,0.0002659661,0.000050367915,0.00045225036,0.00005724524,0.00035063646,0.00019384015,0.00008329144],"category_scores_gemma":[0.00006432067,0.000092468676,0.00007710412,0.00020259547,0.000051487707,0.0000970984,0.00016227171,0.00028024198,0.00006290846],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000060108745,0.00007762001,0.006641794,0.000017218177,0.00003554749,0.000005864372,0.00012303246,0.0000066148286,0.97811085,0.0002598816,0.00009789339,0.014563578],"study_design_scores_gemma":[0.001318949,0.00094981183,0.50646734,0.0007920529,0.00006985858,0.0006116473,0.0006965541,0.012684319,0.40812123,0.004490494,0.061779488,0.0020182433],"about_ca_topic_score_codex":0.001133826,"about_ca_topic_score_gemma":0.0020951913,"teacher_disagreement_score":0.5699896,"about_ca_system_score_codex":0.00005968547,"about_ca_system_score_gemma":0.000041214986,"threshold_uncertainty_score":0.3770763},"labels":[],"label_agreement":null}]}