{"meta":{"query_hash":"9aed071cf1b5","filters":{"venue":"Biological Procedures Online"},"cohort_total":31,"direct_labels_cover":0,"predictions_cover":31,"exported":31,"export_cap":100000,"truncated":false,"label_status":"direct model label, unvalidated","prediction_status":"machine_predicted_unvalidated (Codex and Gemma teacher distillation)","score_status":"score_only:v0-immature-baseline","snapshot":{"source":"OpenAlex, pinned release, all 482 partitions","release":"2026-06-24","frame_built":"2026-07-12"},"permalink":"https://metacan.xera.ac/q/9aed071cf1b5","api":"https://metacan.xera.ac/api/v1/cohort?venue=Biological+Procedures+Online"},"results":[{"id":"W1964982103","doi":"10.1251/bpo142","title":"A method for purification, identification and validation of DNMT1 mRNA binding proteins","year":2008,"lang":"en","type":"article","venue":"Biological Procedures Online","topic":"RNA modifications and cancer","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; William Osler Health System","funders":"","keywords":"DNMT1; Messenger RNA; Molecular biology; Chemistry; Methyltransferase; DNA methyltransferase; Biology; Methylation; DNA; Biochemistry; Gene","score_opus":0.047427828068433694,"score_gpt":0.330109312223341,"score_spread":0.2826814841549073,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1964982103","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.1287787,0.010423623,0.83125705,0.0011503005,0.00093102263,0.003912137,0.007776778,0.004701038,0.011069281],"genre_scores_gemma":[0.13615863,0.011090995,0.77480525,0.0007310433,0.00024557358,0.008495027,0.031129006,0.0010674933,0.03627699],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99833566,0.0003297328,0.0001794257,0.0004143518,0.0005604121,0.00018044208],"domain_scores_gemma":[0.99903095,0.0002823783,0.000094424824,0.00027358788,0.0002262651,0.00009232592],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010623538,0.0023448016,0.0013125814,0.0020375135,0.0013913376,0.0006270589,0.0012165108,0.0012456367,0.0038559625],"category_scores_gemma":[0.0012457044,0.0007587051,0.0010943776,0.0014613236,0.00063016894,0.00055837055,0.0009355208,0.002175902,0.0059759184],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00004086543,0.00006628908,0.00008527124,0.000164839,0.000020786343,0.00007205418,0.00003187666,0.00005660988,0.99331856,0.00025712262,0.00041109908,0.0054745534],"study_design_scores_gemma":[0.000050534498,0.00027768302,0.0022948869,0.000048626276,0.00009430829,0.00089590607,0.000028431105,0.0013583885,0.9539396,0.0004262879,0.04055166,0.0000338754],"about_ca_topic_score_codex":0.0009478931,"about_ca_topic_score_gemma":0.0016475447,"teacher_disagreement_score":0.0038559625,"about_ca_system_score_codex":0.00057146215,"about_ca_system_score_gemma":0.0008309425,"threshold_uncertainty_score":0.012899518},"labels":[],"label_agreement":null},{"id":"W1973815577","doi":"10.1251/bpo92","title":"Screening of compounds toxicity against human Monocytic cell line-THP-1 by flow cytometry","year":2004,"lang":"en","type":"article","venue":"Biological Procedures Online","topic":"Tuberculosis Research and Epidemiology","field":"Medicine","cited_by":46,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"Toxicity; Propidium iodide; Flow cytometry; Cytotoxicity; THP1 cell line; Pharmacology; Cell culture; Biology; Chemistry; Programmed cell death; Immunology; Biochemistry; Apoptosis; In vitro","score_opus":0.06758634702796266,"score_gpt":0.3604276325752788,"score_spread":0.29284128554731614,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1973815577","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.92646307,0.004255972,0.04882338,0.00046804867,0.0002600213,0.001955149,0.0065415134,0.0008112098,0.01042171],"genre_scores_gemma":[0.8913192,0.009025755,0.064340785,0.0005227543,0.00021252093,0.0038861532,0.012072377,0.00016614565,0.018454343],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.998885,0.00035419586,0.00012989207,0.00015058722,0.00031518188,0.00016518816],"domain_scores_gemma":[0.99953496,0.00018445408,0.000045335513,0.00006423713,0.0001443385,0.000026764998],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00090347644,0.0012312545,0.0013031233,0.0009962698,0.00086621376,0.0005217029,0.0007000473,0.0007844484,0.005169386],"category_scores_gemma":[0.00041487635,0.00044280966,0.000767077,0.0012279693,0.00044705713,0.00041434693,0.00038109533,0.0013034063,0.001384018],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00032514485,0.00024639047,0.00038112237,0.00015196767,0.000022857967,0.00007382463,0.00010225538,0.00029818906,0.99563867,0.00014174107,0.00015738264,0.0024604271],"study_design_scores_gemma":[0.0000633142,0.0015023497,0.0034086888,0.000011646557,0.00005147835,0.00013064883,0.000056926103,0.0009936973,0.9917463,0.000102612394,0.0019201451,0.000012144065],"about_ca_topic_score_codex":0.00095936295,"about_ca_topic_score_gemma":0.0015343977,"teacher_disagreement_score":0.005169386,"about_ca_system_score_codex":0.00046340597,"about_ca_system_score_gemma":0.0004796958,"threshold_uncertainty_score":0.017293334},"labels":[],"label_agreement":null},{"id":"W1974314224","doi":"10.1251/bpo58","title":"Methods designed for the identification and characterization ofin vitro andin vivo chromatin assembly mutants inSaccharomyces cerevisiae","year":2003,"lang":"en","type":"article","venue":"Biological Procedures Online","topic":"Genomics and Chromatin Dynamics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":6,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Royal University Hospital; University of Saskatchewan","funders":"","keywords":"Chromatin; Cell biology; Mutant; Biology; Saccharomyces cerevisiae; DNA; ChIP-on-chip; Chromatin remodeling; ChIA-PET; Yeast; Computational biology; Genetics; Gene","score_opus":0.025445848708006077,"score_gpt":0.3111770150045911,"score_spread":0.285731166296585,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1974314224","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.1793001,0.0023254089,0.7887657,0.00072079105,0.00091409223,0.0053007514,0.01199885,0.007135104,0.0035392626],"genre_scores_gemma":[0.14760563,0.0028235612,0.77967983,0.00075879716,0.000102018785,0.01032631,0.040728282,0.0033523517,0.014623283],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99812895,0.0002861374,0.00033019407,0.00042670182,0.00054987153,0.00027821047],"domain_scores_gemma":[0.9976502,0.0004664572,0.0004966463,0.00081924326,0.0002841173,0.00028327317],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001919962,0.002519016,0.0020091524,0.0018090077,0.0016247436,0.0011225551,0.0015582325,0.0011220792,0.005991849],"category_scores_gemma":[0.0018280473,0.0023255143,0.0017986259,0.0010035149,0.001230053,0.00063460734,0.0011776973,0.0038392125,0.0037109198],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00016390212,0.0001150107,0.00028435927,0.00019954411,0.000026012764,0.00009314552,0.0000828218,0.00024759388,0.99265313,0.00068690703,0.0005454866,0.004902018],"study_design_scores_gemma":[0.00009180354,0.00015255893,0.0013629869,0.0000401582,0.00007322462,0.00024467777,0.00003861851,0.00086174766,0.97653383,0.0003424077,0.020210376,0.000047543817],"about_ca_topic_score_codex":0.0024458126,"about_ca_topic_score_gemma":0.00653008,"teacher_disagreement_score":0.005991849,"about_ca_system_score_codex":0.0013533747,"about_ca_system_score_gemma":0.0020044718,"threshold_uncertainty_score":0.020044744},"labels":[],"label_agreement":null},{"id":"W1981353080","doi":"10.1251/bpo32","title":"Methods for analysis of matrix metalloproteinase regulation of neutrophil-endothelial cell adhesion","year":2002,"lang":"en","type":"article","venue":"Biological Procedures Online","topic":"Protease and Inhibitor Mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":11,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Hôpital Maisonneuve-Rosemont; University of Alberta Hospital; University of Alberta","funders":"Medical Research Council; Canadian Institutes of Health Research; Medical Research Council Canada; Heart and Stroke Foundation of Canada","keywords":"Matrix metalloproteinase; Cell biology; Proteases; Gelatinase; Endothelial stem cell; Chemistry; Cell adhesion; Receptor; Biology; Cell; In vitro; Biochemistry; Enzyme","score_opus":0.03963184363176334,"score_gpt":0.33612596077579615,"score_spread":0.2964941171440328,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1981353080","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.069874205,0.0056521497,0.8954262,0.0008927346,0.0007556588,0.0022139107,0.0077536097,0.0037920002,0.013639581],"genre_scores_gemma":[0.14339584,0.009138128,0.7438977,0.0005094605,0.00029216066,0.011116212,0.027962895,0.0020713669,0.06161635],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9988348,0.00019179862,0.0001466991,0.00019888194,0.00038521487,0.00024266692],"domain_scores_gemma":[0.9989378,0.0003385772,0.00012812162,0.00033967523,0.00013615318,0.000119715536],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0012453906,0.0023786859,0.0007934009,0.0023033714,0.001262868,0.0009383069,0.002292365,0.00083597127,0.012331743],"category_scores_gemma":[0.0014071836,0.0011946219,0.0012544959,0.0011241141,0.0007268279,0.0008757176,0.0008818254,0.0031012576,0.008261996],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00040296328,0.00017792202,0.00019434642,0.00028221039,0.000031054675,0.000095943105,0.000060973285,0.00010187954,0.97834504,0.003777192,0.0013858662,0.015144659],"study_design_scores_gemma":[0.000115400544,0.00018960527,0.0023971784,0.000043920158,0.000062799605,0.0004444866,0.000023332048,0.0014657578,0.9518356,0.0015144515,0.041878354,0.000029160388],"about_ca_topic_score_codex":0.0013562551,"about_ca_topic_score_gemma":0.0028222785,"teacher_disagreement_score":0.012331743,"about_ca_system_score_codex":0.00089183555,"about_ca_system_score_gemma":0.0010155516,"threshold_uncertainty_score":0.041253805},"labels":[],"label_agreement":null},{"id":"W1984432977","doi":"10.1251/bpo101","title":"Inactivation of sortilin (a novel lysosomal sorting receptor) by dominant negative competition and RNA interference","year":2005,"lang":"en","type":"article","venue":"Biological Procedures Online","topic":"RNA Interference and Gene Delivery","field":"Biochemistry, Genetics and Molecular Biology","cited_by":14,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"Canadian Institutes of Health Research","keywords":"RNA interference; Cell biology; Mutant; Transfection; Endosome; Small interfering RNA; Vacuolar protein sorting; Golgi apparatus; RNA; HEK 293 cells; Protein targeting; Biology; Transport protein; Lysosome; Chemistry; Biochemistry; Receptor; Gene; Membrane protein; Enzyme; Intracellular","score_opus":0.020401810492855093,"score_gpt":0.27177843672699437,"score_spread":0.25137662623413926,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1984432977","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9278596,0.0025179102,0.054034397,0.00067735947,0.00031427466,0.0005114867,0.0030469026,0.0009052275,0.010132771],"genre_scores_gemma":[0.94744414,0.0019798123,0.035130706,0.0002774148,0.000041196454,0.0005350136,0.0024998474,0.00027808605,0.0118138],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9993667,0.00009853075,0.0000734525,0.00012695436,0.00022980223,0.00010448988],"domain_scores_gemma":[0.9997526,0.00007678369,0.000054164026,0.0000391496,0.000030428502,0.00004703044],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00063169334,0.0007106331,0.0004990948,0.00046192476,0.00026618055,0.0006134201,0.000805281,0.0005971006,0.0013654174],"category_scores_gemma":[0.00022873272,0.00037203764,0.00044503895,0.00033509955,0.0005908312,0.00028772125,0.00029312764,0.0009826706,0.0008480973],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00005454581,0.00001682622,0.000027675578,0.000023797325,0.0000045365823,0.000041067728,0.00001088609,0.00005983354,0.9988016,0.00036527653,0.00005028663,0.0005437378],"study_design_scores_gemma":[0.000027712693,0.00008926898,0.00048838404,0.0000026660048,0.00002476382,0.00020702265,0.0000125021725,0.0019260121,0.99339575,0.00004138246,0.0037769428,0.000007632432],"about_ca_topic_score_codex":0.0013635319,"about_ca_topic_score_gemma":0.0026816756,"teacher_disagreement_score":0.0013654174,"about_ca_system_score_codex":0.0008594852,"about_ca_system_score_gemma":0.00048880506,"threshold_uncertainty_score":0.0062360168},"labels":[],"label_agreement":null},{"id":"W1989702963","doi":"10.1251/bpo56","title":"Two-dimensional DNA displays for comparisons of bacterial genomes","year":2003,"lang":"en","type":"article","venue":"Biological Procedures Online","topic":"Genomics and Phylogenetic Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":4,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"BC Children's Hospital; BC Cancer Agency; University of British Columbia","funders":"Canadian Institutes of Health Research; British Columbia Lung Association","keywords":"Biology; Genome; genomic DNA; Genetics; DNA; Genomics; Bacterial genome size; Bacterial artificial chromosome; Computational biology; DNA sequencing; Comparative genomic hybridization; Genomic library; Gene","score_opus":0.031068007541356312,"score_gpt":0.2866946807913402,"score_spread":0.2556266732499839,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1989702963","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.24141416,0.0037632498,0.6947863,0.0020319272,0.0009757069,0.00074520445,0.02271564,0.013508546,0.020059219],"genre_scores_gemma":[0.33411148,0.0024007617,0.6230245,0.0006452246,0.00017749734,0.0019083946,0.020685561,0.0030256256,0.014020951],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9995196,0.00018444983,0.000049259077,0.000054942826,0.0001143554,0.00007747988],"domain_scores_gemma":[0.99822384,0.0010389866,0.0001150975,0.0003238087,0.00012491024,0.00017339438],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007084943,0.00066802587,0.00051175203,0.0015897653,0.0008542809,0.0012842292,0.0008944149,0.0010743088,0.016334472],"category_scores_gemma":[0.002051374,0.00076697476,0.0005698237,0.0015354246,0.00033694977,0.0009066218,0.0012006446,0.0022022412,0.0038208973],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0010282977,0.00013650971,0.00068180624,0.00052492763,0.000054401353,0.0002340379,0.00023170028,0.00082761917,0.95763063,0.0083397515,0.008347592,0.021962555],"study_design_scores_gemma":[0.00021190573,0.00034988867,0.015022729,0.00014042655,0.00010916589,0.0017544556,0.00028708274,0.017705303,0.87256557,0.0075386493,0.08418551,0.00012934873],"about_ca_topic_score_codex":0.00059420575,"about_ca_topic_score_gemma":0.001304624,"teacher_disagreement_score":0.016334472,"about_ca_system_score_codex":0.0003536759,"about_ca_system_score_gemma":0.0003490855,"threshold_uncertainty_score":0.054644287},"labels":[],"label_agreement":null},{"id":"W1996184524","doi":"10.1251/bpo86","title":"A uniform procedure for the purification of CDK7/CycH/MAT1, CDK8/CycC and CDK9/CycT1","year":2004,"lang":"en","type":"article","venue":"Biological Procedures Online","topic":"Protein Degradation and Inhibitors","field":"Biochemistry, Genetics and Molecular Biology","cited_by":14,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"Natural Sciences and Engineering Research Council of Canada; Ontario Genomics Institute; Ontario Genomics","keywords":"Kinase; Cyclin-dependent kinase; Recombinant DNA; Cyclin-dependent kinase 7; Spodoptera; Chemistry; Biology; Molecular biology; Biochemistry; Protein kinase A; Cyclin-dependent kinase 2; Gene; Cell cycle","score_opus":0.022734362565838377,"score_gpt":0.2773144073790949,"score_spread":0.2545800448132565,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1996184524","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.08651471,0.014685327,0.769756,0.0018398345,0.0027654846,0.010201257,0.05890228,0.021521956,0.033813164],"genre_scores_gemma":[0.11157807,0.013000494,0.509698,0.0012004134,0.0005279288,0.012429328,0.23009887,0.004667181,0.116799705],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99903107,0.00009361133,0.00009229679,0.0002809145,0.00028605043,0.000216039],"domain_scores_gemma":[0.9991672,0.000121228724,0.000056020293,0.0002916572,0.00021181697,0.00015211492],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010033188,0.0032247442,0.0026873297,0.0025587596,0.0019827085,0.0014125837,0.002621856,0.00070378365,0.015445596],"category_scores_gemma":[0.0011224065,0.001068913,0.0016595008,0.0026473475,0.0007103115,0.0005446128,0.0015800949,0.0045820563,0.019917062],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00065195316,0.00041452918,0.00064345653,0.00078264676,0.00016564816,0.00019332943,0.0001718165,0.00059332995,0.93007547,0.003192194,0.026598439,0.036517274],"study_design_scores_gemma":[0.000334231,0.00035438122,0.007233432,0.0001343288,0.00032745054,0.0009435951,0.000053385345,0.003111443,0.74910206,0.001478242,0.23673633,0.00019111793],"about_ca_topic_score_codex":0.008185192,"about_ca_topic_score_gemma":0.015130486,"teacher_disagreement_score":0.015445596,"about_ca_system_score_codex":0.0017371791,"about_ca_system_score_gemma":0.0030429154,"threshold_uncertainty_score":0.05167067},"labels":[],"label_agreement":null},{"id":"W2005979886","doi":"10.1251/bpo140","title":"Identification of a calcitriol-regulated Sp-1 site in the promoter of human CD14 using a combined western blotting elect rophoresis mobility shift assay (WEMSA)","year":2008,"lang":"en","type":"article","venue":"Biological Procedures Online","topic":"RNA modifications and cancer","field":"Biochemistry, Genetics and Molecular Biology","cited_by":12,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia; Vancouver Coastal Health Research Institute","funders":"","keywords":"Calcitriol; Electrophoretic mobility shift assay; Transcription factor; Molecular biology; Western blot; Calcitriol receptor; Transcription (linguistics); Binding site; CD14; Blot; Northern blot; Chemistry; Biology; Cell biology; Gene expression; Gene; Biochemistry; Endocrinology; Vitamin D and neurology","score_opus":0.04116928218843285,"score_gpt":0.313887666083765,"score_spread":0.27271838389533215,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2005979886","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.87435067,0.0030619178,0.11706778,0.0005121157,0.00018508694,0.00035597186,0.0016807393,0.0004303819,0.0023553527],"genre_scores_gemma":[0.75203574,0.0035497097,0.22851717,0.00037975077,0.0000968525,0.0007871091,0.0062566325,0.00014660151,0.008230556],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9993519,0.00013707344,0.00006963352,0.00020069288,0.00016319843,0.000077434976],"domain_scores_gemma":[0.99953675,0.0001813085,0.0000863236,0.00005197112,0.00008844591,0.000055253582],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000465966,0.0007179549,0.00048490267,0.0007878401,0.00044175438,0.0004181227,0.0005155767,0.00048361157,0.0018747761],"category_scores_gemma":[0.0005637895,0.0003800057,0.0008827725,0.0004913159,0.00045478452,0.00028534295,0.0005123077,0.0013197372,0.0010188164],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00004405007,0.000022589025,0.00014203707,0.00003126085,0.0000072735147,0.000015285808,0.000020805459,0.000020789355,0.9988194,0.000045037657,0.00001817603,0.0008133558],"study_design_scores_gemma":[0.000017365179,0.0002063434,0.0057243155,0.000013666933,0.000026797603,0.00024713718,0.000039258517,0.0014567826,0.990243,0.00008313478,0.0019311312,0.000011029371],"about_ca_topic_score_codex":0.0006484761,"about_ca_topic_score_gemma":0.0013763615,"teacher_disagreement_score":0.0018747761,"about_ca_system_score_codex":0.00030454216,"about_ca_system_score_gemma":0.00041365076,"threshold_uncertainty_score":0.00627172},"labels":[],"label_agreement":null},{"id":"W2011295425","doi":"10.1251/bpo84","title":"Visualizing the needle in the haystack: In situ hybridization with fluorescent dendrimers","year":2004,"lang":"en","type":"article","venue":"Biological Procedures Online","topic":"RNA Interference and Gene Delivery","field":"Biochemistry, Genetics and Molecular Biology","cited_by":14,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Western University","funders":"Eunice Kennedy Shriver National Institute of Child Health and Human Development","keywords":"Epiblast; MyoD; In situ hybridization; Molecular biology; Biology; Messenger RNA; Skeletal muscle; Primitive streak; Population; MyoD Protein; Cell biology; Embryo; Gastrulation; Myogenesis; Genetics; Anatomy; Embryogenesis; Gene","score_opus":0.0227856541647699,"score_gpt":0.2806742154372932,"score_spread":0.2578885612725233,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2011295425","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.5327453,0.0047559566,0.44182554,0.0024352118,0.00060341664,0.00025711523,0.0005636667,0.0020645657,0.014749239],"genre_scores_gemma":[0.6851299,0.005836474,0.2793534,0.0004300756,0.00017979842,0.00023174632,0.0007639848,0.00074744417,0.027327241],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997584,0.000027208442,0.00001136473,0.000070518625,0.000057328558,0.000075245516],"domain_scores_gemma":[0.9997471,0.00008376205,0.000044136377,0.00004477571,0.000036457597,0.00004383302],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00050987484,0.0007171097,0.00045446254,0.0005778141,0.0009112179,0.0009240294,0.00067701965,0.0013314493,0.0022108667],"category_scores_gemma":[0.00031026185,0.00071263715,0.00054946746,0.0003921984,0.0006016401,0.0009428777,0.0006201879,0.0020482058,0.0016381306],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00003686172,0.0000087711205,0.000032051586,0.00003788183,0.0000024379713,0.00004331434,0.000030570485,0.00005576936,0.99799347,0.0006470815,0.00008456308,0.001027341],"study_design_scores_gemma":[0.000011900834,0.000062686464,0.00032772924,0.000010428989,0.0000095078,0.000255767,0.000042923875,0.001332022,0.9942748,0.00042271725,0.0032417132,0.000007877764],"about_ca_topic_score_codex":0.0011444744,"about_ca_topic_score_gemma":0.0019962168,"teacher_disagreement_score":0.0022108667,"about_ca_system_score_codex":0.0008548607,"about_ca_system_score_gemma":0.00047740815,"threshold_uncertainty_score":0.0073960423},"labels":[],"label_agreement":null},{"id":"W2020026152","doi":"10.1251/bpo127","title":"The use of microscopy and three-dimensional visualization to evaluate the structure of microbial biofilms cultivated in the calgary biofilm device","year":2006,"lang":"en","type":"article","venue":"Biological Procedures Online","topic":"Bacterial biofilms and quorum sensing","field":"Biochemistry, Genetics and Molecular Biology","cited_by":151,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of Calgary","funders":"Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research; Alberta Heritage Foundation for Medical Research; Fondation pour la Recherche Médicale","keywords":"Biofilm; Multicellular organism; Confocal laser scanning microscopy; Confocal microscopy; Microorganism; Microscopy; Biology; Population; Microbiology; Nanotechnology; Chemistry; Materials science; Bacteria; Cell biology; Cell; Optics; Biochemistry","score_opus":0.025940712750172762,"score_gpt":0.289700580586938,"score_spread":0.2637598678367652,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2020026152","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.37166235,0.010026001,0.6076562,0.00095725484,0.00019732681,0.00052363897,0.0006560148,0.001235534,0.0070857606],"genre_scores_gemma":[0.37218672,0.00444781,0.61996764,0.00017465361,0.000023934084,0.0004910213,0.000352847,0.00008286594,0.0022725803],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99953604,0.000095370924,0.000033188295,0.00007367297,0.00021403826,0.00004771928],"domain_scores_gemma":[0.9993412,0.00029042776,0.000083062034,0.000106071326,0.00009395911,0.00008526566],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009318041,0.0003709624,0.00027824045,0.0018136055,0.0006177959,0.0006816497,0.00084230676,0.0006844932,0.00083689217],"category_scores_gemma":[0.00077042205,0.0003175106,0.00027409563,0.000637752,0.00071813277,0.00056953536,0.0011730118,0.00096363365,0.00022046674],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000022925038,0.000020343548,0.00057788333,0.00007924967,0.000007577545,0.000054620952,0.00007310869,0.00034054284,0.9845942,0.0010167764,0.00012427125,0.013088412],"study_design_scores_gemma":[0.000037155653,0.00050185545,0.026768794,0.000068092624,0.000036931957,0.001844961,0.00018186038,0.017213013,0.93922055,0.0012281777,0.012771436,0.00012710996],"about_ca_topic_score_codex":0.0039155786,"about_ca_topic_score_gemma":0.0051567727,"teacher_disagreement_score":0.0039155786,"about_ca_system_score_codex":0.00081510347,"about_ca_system_score_gemma":0.0007093671,"threshold_uncertainty_score":0.0077855587},"labels":[],"label_agreement":null},{"id":"W2020135617","doi":"10.1251/bpo61","title":"Swarming populations ofSalmonella represent a unique physiological state coupled to multiple mechanisms of antibiotic resistance","year":2003,"lang":"en","type":"article","venue":"Biological Procedures Online","topic":"Bacteriophages and microbial interactions","field":"Environmental Science","cited_by":61,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"Canadian Institutes of Health Research; Fondation pour la Recherche Médicale","keywords":"Swarming (honey bee); Swarming motility; Virulence; Biology; Quorum sensing; Salmonella enterica; Swarm behaviour; Microbiology; Antibiotic resistance; Bacteria; Operon; Antibiotics; Genetics; Mutant; Salmonella; Gene; Ecology","score_opus":0.04560629718773033,"score_gpt":0.2940333164679893,"score_spread":0.24842701928025898,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2020135617","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9970284,0.00023064746,0.001969303,0.00007860919,0.000017075696,0.00000676624,0.00008421737,0.0000491905,0.0005356407],"genre_scores_gemma":[0.9977169,0.0001038772,0.0014525119,0.00003112268,0.000015218347,0.000008351476,0.00018849668,0.000010764473,0.00047281865],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998702,0.000015401594,0.000010683216,0.000028688035,0.00003741936,0.000037558864],"domain_scores_gemma":[0.9997985,0.000029735142,0.000053693246,0.0000371067,0.000024755853,0.00005614011],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013881736,0.00025912785,0.0002308254,0.00026665983,0.0002824875,0.0005748993,0.00018833177,0.00028123928,0.00077601045],"category_scores_gemma":[0.00030146103,0.0001723683,0.0001906484,0.00015355111,0.00035822229,0.00035809612,0.00045605042,0.0005089076,0.00020624915],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000063542306,0.000009388925,0.0021040807,0.000012703408,0.0000038069977,0.000040102812,0.00006077531,0.000026582717,0.9955159,0.00017154936,0.000044954802,0.0019466955],"study_design_scores_gemma":[0.000048195932,0.00068163354,0.111543685,0.000011865121,0.000051525636,0.0016137259,0.00054697564,0.0024486012,0.8782865,0.00083452347,0.0038977363,0.00003504517],"about_ca_topic_score_codex":0.00036778479,"about_ca_topic_score_gemma":0.00088758965,"teacher_disagreement_score":0.00077601045,"about_ca_system_score_codex":0.00015037715,"about_ca_system_score_gemma":0.000109350396,"threshold_uncertainty_score":0.0025960803},"labels":[],"label_agreement":null},{"id":"W2021355386","doi":"10.1251/bpo23","title":"A fluorescence microscopy method for quantifying the detection of prostaglandin endoperoxide H synthase-1 and CD-41 in MEG-01 cells","year":2001,"lang":"en","type":"article","venue":"Biological Procedures Online","topic":"Inflammatory mediators and NSAID effects","field":"Medicine","cited_by":9,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Ottawa","funders":"","keywords":"Platelet; Flow cytometry; Cell biology; Chemistry; Immunofluorescence; Fluorescence microscope; Cell culture; Cellular differentiation; Megakaryocyte; Cell; Molecular biology; Fluorescence; Antibody; Biology; Biochemistry; Immunology; Progenitor cell; Gene; Stem cell","score_opus":0.04375342903694388,"score_gpt":0.34106054000522346,"score_spread":0.29730711096827955,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2021355386","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.21093455,0.002098022,0.766354,0.0011656012,0.00044471733,0.00064975163,0.0012546168,0.0038787455,0.013219871],"genre_scores_gemma":[0.26538384,0.0030237248,0.7059133,0.0005017195,0.00019626622,0.0034900939,0.0027154207,0.00052208966,0.018253515],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9986727,0.0003115625,0.00013963097,0.00031854914,0.00032143237,0.00023611507],"domain_scores_gemma":[0.9986859,0.0005922736,0.00014800465,0.0002690646,0.00021056095,0.00009417317],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0016385644,0.001609417,0.0010828663,0.002044883,0.0019886843,0.00084263313,0.0023194312,0.0018867572,0.006037796],"category_scores_gemma":[0.0007690349,0.001159317,0.0011701923,0.0014065612,0.0008906709,0.0009135637,0.0008153232,0.0038739904,0.0026029414],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009385628,0.00006077748,0.00013590812,0.00013945017,0.000016050302,0.000066066124,0.00007174694,0.00007833331,0.9936978,0.0012986563,0.0003687634,0.0039727422],"study_design_scores_gemma":[0.000048231355,0.00011172655,0.0016598793,0.000023520326,0.00003876005,0.00047077093,0.00003307667,0.0041970164,0.98825604,0.0004482597,0.0046882825,0.000024494662],"about_ca_topic_score_codex":0.0013588986,"about_ca_topic_score_gemma":0.0029082487,"teacher_disagreement_score":0.006037796,"about_ca_system_score_codex":0.0015396931,"about_ca_system_score_gemma":0.00085057825,"threshold_uncertainty_score":0.020198464},"labels":[],"label_agreement":null},{"id":"W2044652854","doi":"10.1251/bpo103","title":"An improved method for constructing and selectively silanizing double-barreled, neutral liquid-carrier, ion-selective microelectrodes","year":2005,"lang":"en","type":"article","venue":"Biological Procedures Online","topic":"Analytical Chemistry and Sensors","field":"Chemical Engineering","cited_by":9,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Microelectrode; Ion; Materials science; Chemistry; Electrode; Computer science; Biomedical engineering; Nanotechnology; Engineering; Physical chemistry","score_opus":0.024366579101660246,"score_gpt":0.3064306188952607,"score_spread":0.28206403979360045,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2044652854","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.13903105,0.005719297,0.84980434,0.00034871371,0.00037199372,0.0003263959,0.00044220258,0.0024978062,0.0014582183],"genre_scores_gemma":[0.18346217,0.002369473,0.8098681,0.00014391172,0.00007517964,0.00028891978,0.0006863252,0.00010822606,0.002997738],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99958795,0.000046723282,0.00004321436,0.00011002578,0.0001732167,0.000038757167],"domain_scores_gemma":[0.9997193,0.00008079196,0.000045743465,0.000047123784,0.00008175359,0.000025198828],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00051561574,0.0006495032,0.0004707566,0.00046039475,0.00023201911,0.00032391198,0.0008520059,0.0005480168,0.0007108441],"category_scores_gemma":[0.00048760773,0.00041462743,0.00035410604,0.0002274505,0.00029296055,0.000563141,0.0004891365,0.0009395741,0.0007713627],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000008790962,0.0000062342733,0.00003950457,0.000049259645,0.000004581,0.000027445061,0.000009990464,0.000053164687,0.99507624,0.00009886608,0.00007684917,0.0045490614],"study_design_scores_gemma":[0.000010184318,0.00007665794,0.0006003072,0.0000032314697,0.000014260076,0.0005490165,0.0000061776136,0.001701727,0.99060774,0.000067451074,0.0063514346,0.0000117225145],"about_ca_topic_score_codex":0.00032651858,"about_ca_topic_score_gemma":0.0006782467,"teacher_disagreement_score":0.0008520059,"about_ca_system_score_codex":0.0002483217,"about_ca_system_score_gemma":0.00035163615,"threshold_uncertainty_score":0.002726853},"labels":[],"label_agreement":null},{"id":"W2046660691","doi":"10.1007/s12575-009-9010-3","title":"A Modified Protocol for Bisulfite Genomic Sequencing of Difficult Samples","year":2009,"lang":"en","type":"article","venue":"Biological Procedures Online","topic":"Epigenetics and DNA Methylation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; McGill University","funders":"Directorate for Biological Sciences; McGill University; Nanyang Technological University; Cancer Research Society; Institute of Cancer Research; Institut Du Cancer de Montréal","keywords":"Bisulfite; Cytosine; Deamination; Restriction digest; DNA; genomic DNA; Restriction enzyme; Biology; Polymerase chain reaction; DNA methylation; Computational biology; Bisulfite sequencing; Molecular biology; Biochemistry; Gene; Enzyme; Gene expression","score_opus":0.08691515981385817,"score_gpt":0.35376372713442955,"score_spread":0.2668485673205714,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2046660691","genre_codex":"methods","genre_gemma":"protocol","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"protocol","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.012076948,0.0016454561,0.9471449,0.00027008544,0.0012155978,0.008784889,0.010874888,0.00956436,0.008422836],"genre_scores_gemma":[0.0133023895,0.0013312752,0.92553645,0.0005048339,0.00012840524,0.011943556,0.02203672,0.0013347265,0.023881724],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.996042,0.001038652,0.000539908,0.0010553218,0.0009641777,0.0003599879],"domain_scores_gemma":[0.9982181,0.0002494292,0.000082635765,0.00096604327,0.00038104755,0.00010273993],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0028002334,0.0029691532,0.0021172634,0.0039002968,0.0018660714,0.0011728426,0.0032012095,0.0018051098,0.02824328],"category_scores_gemma":[0.0030381847,0.0022322235,0.0018805562,0.0025726843,0.0010174952,0.0009336278,0.0014219886,0.00492263,0.0267706],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00047652287,0.00040580012,0.0005891516,0.0013963243,0.00025371613,0.00055549305,0.00043695932,0.001289953,0.89429176,0.00332398,0.019209772,0.07777052],"study_design_scores_gemma":[0.0003245761,0.0010470223,0.0038837027,0.0002048314,0.000384267,0.0023786922,0.000084614476,0.0071917125,0.4762133,0.0031231109,0.50487185,0.0002923756],"about_ca_topic_score_codex":0.001211816,"about_ca_topic_score_gemma":0.00511626,"teacher_disagreement_score":0.02824328,"about_ca_system_score_codex":0.00058292726,"about_ca_system_score_gemma":0.001786887,"threshold_uncertainty_score":0.09448314},"labels":[],"label_agreement":null},{"id":"W2057954774","doi":"10.1251/bpo34","title":"Primary culture and mRNA analysis of human ovarian cells","year":2002,"lang":"en","type":"article","venue":"Biological Procedures Online","topic":"TGF-β signaling in diseases","field":"Biochemistry, Genetics and Molecular Biology","cited_by":42,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University","funders":"National Cancer Institute; Faculty of Medicine, Dalhousie University; Canadian Institutes of Health Research; Dalhousie University; Nova Scotia Health Research Foundation; Dalhousie Medical Research Foundation","keywords":"Primary culture; Messenger RNA; Primary (astronomy); Computational biology; Primary cell; Andrology; Bioinformatics; Biology; Computer science; Cell culture; Medicine; Cell biology; Genetics; Gene","score_opus":0.022241537330839615,"score_gpt":0.26765830726474477,"score_spread":0.24541676993390515,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2057954774","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.3914752,0.021443501,0.33918864,0.0029081644,0.005275825,0.009692569,0.13911857,0.004542365,0.08635525],"genre_scores_gemma":[0.3756511,0.02602704,0.3243789,0.002674263,0.0017120874,0.010364241,0.16592892,0.0017021386,0.09156126],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9994586,0.000052670268,0.000065287306,0.00014172272,0.00013025726,0.00015149267],"domain_scores_gemma":[0.99963284,0.00008406166,0.000022222672,0.00009438985,0.000120099336,0.00004643588],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005838049,0.0007783211,0.0009398736,0.0011751155,0.0010574788,0.0007185477,0.00066856085,0.00046961597,0.011427218],"category_scores_gemma":[0.00047197356,0.0005075935,0.00076983497,0.0011253613,0.0004616483,0.00027193595,0.00043361806,0.0014654931,0.0061125928],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00033281924,0.00009529649,0.00039518514,0.00029754706,0.000022058184,0.00029597012,0.00011676683,0.00011503296,0.98744595,0.0009989564,0.002617811,0.007266686],"study_design_scores_gemma":[0.0001832352,0.0005113483,0.008945112,0.00008210814,0.00014298271,0.0011085878,0.00015958298,0.001307848,0.8494098,0.00081138476,0.13730684,0.00003113696],"about_ca_topic_score_codex":0.0020369445,"about_ca_topic_score_gemma":0.004089767,"teacher_disagreement_score":0.011427218,"about_ca_system_score_codex":0.00037701332,"about_ca_system_score_gemma":0.001127559,"threshold_uncertainty_score":0.038227856},"labels":[],"label_agreement":null},{"id":"W2064612471","doi":"10.1251/bpo119","title":"Practical three color live cell imaging by widefield microscopy","year":2006,"lang":"en","type":"article","venue":"Biological Procedures Online","topic":"Advanced Fluorescence Microscopy Techniques","field":"Biochemistry, Genetics and Molecular Biology","cited_by":11,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"Canadian Institutes of Health Research","keywords":"Fluorophore; Aequorea victoria; Fluorescence; Fluorescence microscope; Green fluorescent protein; Microscope; Microscopy; Live cell imaging; Cytoplasm; Biophysics; Fusion protein; Cell biology; Protein subcellular localization prediction; Chemistry; Biology; Cell; Optics; Biochemistry; Physics; Gene","score_opus":0.011956261032529017,"score_gpt":0.31046368332748653,"score_spread":0.2985074222949575,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2064612471","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.14628033,0.0012737007,0.8423251,0.0003738263,0.00008077425,0.00013027138,0.00049511704,0.0018007614,0.007240084],"genre_scores_gemma":[0.3488071,0.0023526459,0.63887393,0.00024479514,0.000052185846,0.00045643584,0.00094026886,0.00027054962,0.008002146],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9996014,0.00005571987,0.000019869767,0.00011084718,0.00017365123,0.00003853424],"domain_scores_gemma":[0.9996171,0.00013763661,0.000037520862,0.00008491765,0.0000839529,0.000038821003],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005070505,0.00068317674,0.00037620676,0.00044259697,0.00029963578,0.0005594437,0.00082731724,0.00077358837,0.003453727],"category_scores_gemma":[0.00044059491,0.0004166891,0.00027444185,0.0003037717,0.0004899956,0.0008919346,0.0009902942,0.0012900408,0.0016684621],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000024996862,0.000009906879,0.00008058712,0.000043944052,0.000002661251,0.00003237612,0.000016426051,0.00026122155,0.99329877,0.00062822,0.00019869447,0.0054022917],"study_design_scores_gemma":[0.000014884755,0.00006612617,0.0010145562,0.000009364226,0.000006306071,0.0007691864,0.000031310683,0.010889173,0.9796444,0.0010571313,0.0064733,0.000024311523],"about_ca_topic_score_codex":0.00040832153,"about_ca_topic_score_gemma":0.0005362769,"teacher_disagreement_score":0.003453727,"about_ca_system_score_codex":0.00036239775,"about_ca_system_score_gemma":0.00024129375,"threshold_uncertainty_score":0.011553884},"labels":[],"label_agreement":null},{"id":"W2067724188","doi":"10.1251/bpo43","title":"A semi-quantitative RT-PCR method to measure thein vivo effect of dietary conjugated linoleic acid on porcine muscle PPAR gene expression","year":2003,"lang":"en","type":"article","venue":"Biological Procedures Online","topic":"Peroxisome Proliferator-Activated Receptors","field":"Biochemistry, Genetics and Molecular Biology","cited_by":71,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Agriculture and Agri-Food Canada","funders":"","keywords":"Conjugated linoleic acid; Peroxisome proliferator-activated receptor; Gene expression; In vivo; Blot; Biology; Western blot; Real-time polymerase chain reaction; Skeletal muscle; Gene; Molecular biology; Housekeeping gene; Internal medicine; Endocrinology; Biochemistry; Fatty acid; Linoleic acid; Genetics","score_opus":0.030000171316482135,"score_gpt":0.31372061226674824,"score_spread":0.2837204409502661,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2067724188","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.02854137,0.0013779043,0.9529723,0.00046688708,0.0009845307,0.0022437163,0.006044291,0.0041730716,0.0031959529],"genre_scores_gemma":[0.024187448,0.0011815785,0.93703467,0.0006227277,0.00021077807,0.0098938905,0.0113822995,0.002187578,0.013298882],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99285275,0.0018407588,0.00082260976,0.0020523833,0.0016449095,0.0007865327],"domain_scores_gemma":[0.9956684,0.002054863,0.00036519745,0.00074328325,0.0007784428,0.00038980015],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0044089514,0.008343654,0.00403243,0.0045387247,0.0025310572,0.001384734,0.003957275,0.0018546017,0.015301597],"category_scores_gemma":[0.0014377477,0.0040859194,0.00422113,0.0028370938,0.003636422,0.0014658051,0.0015898478,0.00934925,0.0078073847],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00032551002,0.00023390022,0.00015436833,0.00038401122,0.000042266518,0.000056752662,0.00011312466,0.00020936968,0.9931778,0.00068264006,0.00048103137,0.0041393507],"study_design_scores_gemma":[0.00022309808,0.00076774013,0.0009287867,0.00009574662,0.00016630502,0.00020587971,0.000054712957,0.0027691943,0.9835073,0.00049728807,0.010705808,0.00007822717],"about_ca_topic_score_codex":0.0013656789,"about_ca_topic_score_gemma":0.003933755,"teacher_disagreement_score":0.015301597,"about_ca_system_score_codex":0.0026559352,"about_ca_system_score_gemma":0.0033322005,"threshold_uncertainty_score":0.051188886},"labels":[],"label_agreement":null},{"id":"W2083278465","doi":"10.1007/s12575-009-9009-9","title":"A Method for Structure–Activity Analysis of Quorum-Sensing Signaling Peptides from Naturally Transformable Streptococci","year":2009,"lang":"en","type":"article","venue":"Biological Procedures Online","topic":"Biochemical and Structural Characterization","field":"Biochemistry, Genetics and Molecular Biology","cited_by":22,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute for Marine Biosciences; Dalhousie University","funders":"Natural Sciences and Engineering Research Council of Canada; Universität Zürich; Dalhousie University; University of Toronto; Canadian Institutes of Health Research; Killam Trusts","keywords":"Quorum sensing; Computational biology; Computer science; Chemistry; Microbiology; Biology; Bacteria; Biofilm; Genetics","score_opus":0.0165463368884333,"score_gpt":0.2980560574672695,"score_spread":0.28150972057883616,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2083278465","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.19144168,0.0038649356,0.78719676,0.00071466784,0.00036850627,0.0010172344,0.003326116,0.0022200427,0.009850042],"genre_scores_gemma":[0.26415205,0.0045305365,0.7056021,0.0002905845,0.00006237601,0.0022786562,0.007665442,0.00055041735,0.014867795],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99930644,0.00016745414,0.00007883496,0.00012339938,0.0002486876,0.00007514726],"domain_scores_gemma":[0.99930954,0.00026819578,0.000103449376,0.00014173065,0.000107571155,0.00006951876],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007553678,0.0013251303,0.00055018876,0.0015375378,0.0005183583,0.0005189194,0.0008095476,0.00074506097,0.0033582507],"category_scores_gemma":[0.00095548603,0.0005805115,0.0005925795,0.0013401231,0.00026237563,0.00048496554,0.00036116957,0.0017996989,0.002107615],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000044894008,0.00006523996,0.00010284519,0.00007916133,0.000014906207,0.000048814967,0.00002090724,0.0000817939,0.99276745,0.00035127424,0.00015113225,0.006271584],"study_design_scores_gemma":[0.000035866615,0.00024519337,0.0011596417,0.000016325685,0.000029616229,0.00036285544,0.000019139554,0.0022838817,0.9854592,0.00028501116,0.010088766,0.00001448899],"about_ca_topic_score_codex":0.0005254015,"about_ca_topic_score_gemma":0.0011928952,"teacher_disagreement_score":0.0033582507,"about_ca_system_score_codex":0.00035799987,"about_ca_system_score_gemma":0.00059913285,"threshold_uncertainty_score":0.011234462},"labels":[],"label_agreement":null},{"id":"W2103475704","doi":"10.1251/bpo114","title":"Rapid and simple comparison of messenger rna levels using real-time PCR","year":2006,"lang":"en","type":"article","venue":"Biological Procedures Online","topic":"Molecular Biology Techniques and Applications","field":"Biochemistry, Genetics and Molecular Biology","cited_by":249,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"Canadian Arthritis Network; Canadian Institutes of Health Research; Arthritis Society","keywords":"Real-time polymerase chain reaction; Computational biology; Messenger RNA; Computer science; Polymerase chain reaction; Gene; Nucleic acid; Biology; Bioinformatics; Genetics","score_opus":0.04390339224103777,"score_gpt":0.33629925975400876,"score_spread":0.292395867512971,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2103475704","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.06085619,0.007146117,0.9141157,0.00042411374,0.0013631204,0.0015580944,0.0033811717,0.004415049,0.0067403936],"genre_scores_gemma":[0.107581444,0.007390213,0.86586285,0.0003539003,0.0003880453,0.003806533,0.0055997972,0.0007340304,0.008283196],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99616665,0.0007669395,0.00037992423,0.0009921516,0.0014785724,0.00021578823],"domain_scores_gemma":[0.9977568,0.0010022513,0.00024011708,0.00035527776,0.00054768706,0.000097869335],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0022420648,0.0014850073,0.0014506482,0.0019986778,0.000564207,0.0017546455,0.0014805314,0.0012289099,0.0055981083],"category_scores_gemma":[0.0034825224,0.00073960394,0.0009595654,0.0013780121,0.0010787268,0.0014480809,0.0008962038,0.002514155,0.004223273],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009993711,0.000089415575,0.00018672098,0.00031254315,0.000017971592,0.0000616876,0.00003876226,0.00019409691,0.9832359,0.0005844716,0.000447984,0.014730439],"study_design_scores_gemma":[0.000047419995,0.000539582,0.002037171,0.000065115244,0.00006385258,0.00039628206,0.00006324195,0.002683352,0.96974933,0.0017164774,0.02256408,0.000074171585],"about_ca_topic_score_codex":0.00015031664,"about_ca_topic_score_gemma":0.00035286238,"teacher_disagreement_score":0.0055981083,"about_ca_system_score_codex":0.0003758694,"about_ca_system_score_gemma":0.00060343294,"threshold_uncertainty_score":0.018727481},"labels":[],"label_agreement":null},{"id":"W2103977301","doi":"10.1251/bpo139","title":"Quantitative evaluation of signaling events in Drosophila S2 cells","year":2008,"lang":"en","type":"article","venue":"Biological Procedures Online","topic":"Invertebrate Immune Response Mechanisms","field":"Immunology and Microbiology","cited_by":21,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"Fondation pour la Recherche Médicale","keywords":"Signal transduction; Cell biology; Biology; Transcription factor; Kinase; Schneider 2 cells; Western blot; Immune system; Gene; Immunology; Genetics; RNA interference","score_opus":0.09551090563758444,"score_gpt":0.3212377740750499,"score_spread":0.22572686843746545,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2103977301","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9169391,0.00391501,0.051412463,0.00030899944,0.00031706912,0.00067657046,0.010555342,0.00090717763,0.014968216],"genre_scores_gemma":[0.8623104,0.0051853782,0.08957711,0.0003955355,0.00013203724,0.0026475154,0.013040696,0.00038987037,0.026321603],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9990845,0.0001128927,0.00010946747,0.00023756655,0.00032952885,0.00012609991],"domain_scores_gemma":[0.9994948,0.00012537163,0.000082690494,0.00007019685,0.0001112666,0.00011563609],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006098403,0.0008852324,0.0005329372,0.0013099948,0.0006668351,0.0006236691,0.00060212996,0.00086787395,0.0026462448],"category_scores_gemma":[0.00019572153,0.0002702263,0.00057436037,0.001247486,0.00052684656,0.00045260074,0.0003696016,0.001787489,0.0013457418],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006303396,0.000042399344,0.000120406454,0.000043764187,0.0000053235517,0.000029174482,0.000054626933,0.000042016105,0.9985133,0.00014285398,0.000052495794,0.00089060643],"study_design_scores_gemma":[0.00002014474,0.0002814339,0.0051818513,0.000009783965,0.00001898526,0.00009994587,0.00009230261,0.0016257728,0.99010205,0.000091415015,0.0024643198,0.000011986593],"about_ca_topic_score_codex":0.0012538312,"about_ca_topic_score_gemma":0.0020201355,"teacher_disagreement_score":0.0026462448,"about_ca_system_score_codex":0.00095066155,"about_ca_system_score_gemma":0.00031355247,"threshold_uncertainty_score":0.008852541},"labels":[],"label_agreement":null},{"id":"W2147141656","doi":"10.1007/s12575-010-9028-6","title":"Highly Efficient Stable Expression of Indoleamine 2,3 Dioxygenase Gene in Primary Fibroblasts","year":2010,"lang":"en","type":"article","venue":"Biological Procedures Online","topic":"Tryptophan and brain disorders","field":"Neuroscience","cited_by":11,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Vancouver General Hospital; University of British Columbia","funders":"Canadian Institutes of Health Research","keywords":"Indoleamine 2,3-dioxygenase; Cell sorting; Gene expression; Transfection; Population; Cell biology; Biology; Immune system; Transplantation; Inducer; Regulation of gene expression; Cancer research; Gene; Molecular biology; Chemistry; Immunology; Flow cytometry; Genetics; Medicine","score_opus":0.02226370948116194,"score_gpt":0.25636468020754594,"score_spread":0.234100970726384,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2147141656","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.91742015,0.002237307,0.07164873,0.00017445486,0.00023113632,0.0003487193,0.0016802582,0.00044242886,0.0058169514],"genre_scores_gemma":[0.95094025,0.0017510285,0.037302032,0.000062936546,0.000027584767,0.00025536484,0.0012856596,0.00007347356,0.008301717],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99974734,0.000026574187,0.000039896422,0.000064022024,0.00007667155,0.000045555975],"domain_scores_gemma":[0.99983764,0.0000422568,0.000026617858,0.000036725076,0.000028029517,0.000028745326],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00040520722,0.00036850077,0.0003228573,0.00020993254,0.00019520099,0.00036295215,0.00024074431,0.00030436597,0.0007952774],"category_scores_gemma":[0.00019453322,0.00014919414,0.00027485084,0.00015977293,0.00022972697,0.00019870227,0.00024480282,0.0005351467,0.00056273537],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000015552157,0.0000105975205,0.000028393533,0.000013896662,0.0000012619606,0.000029776065,0.000015591659,0.000027254075,0.99919814,0.00008243576,0.00001735445,0.0005596289],"study_design_scores_gemma":[0.0000091444035,0.00007882792,0.00053946377,0.0000035650428,0.000008743695,0.00011693579,0.00001208153,0.00060719205,0.9963265,0.000028441207,0.0022653164,0.0000036268968],"about_ca_topic_score_codex":0.0008914613,"about_ca_topic_score_gemma":0.0014325511,"teacher_disagreement_score":0.0008914613,"about_ca_system_score_codex":0.0002827408,"about_ca_system_score_gemma":0.00029383556,"threshold_uncertainty_score":0.0026604533},"labels":[],"label_agreement":null},{"id":"W2155563862","doi":"10.1186/1480-9222-13-9","title":"An automated cell-counting algorithm for fluorescently-stained cells in migration assays","year":2011,"lang":"en","type":"article","venue":"Biological Procedures Online","topic":"Cell Image Analysis Techniques","field":"Biochemistry, Genetics and Molecular Biology","cited_by":32,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Western University","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Cell counting; Automated method; Algorithm; Cell; Membrane; Computer science; Biomedical engineering; Chemistry; Artificial intelligence; Medicine; Biochemistry","score_opus":0.01852348597795997,"score_gpt":0.29440670284930115,"score_spread":0.2758832168713412,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2155563862","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0061662453,0.00008307574,0.98559177,0.0000337645,0.00007276256,0.0002914177,0.00037465425,0.0066583073,0.0007280574],"genre_scores_gemma":[0.013530517,0.00009771416,0.98112065,0.000038042115,0.000020964539,0.0017149394,0.0006581368,0.0009285081,0.0018905181],"study_design_codex":"bench_or_experimental","study_design_gemma":"simulation_or_modeling","domain_scores_codex":[0.996402,0.0005669735,0.00048520358,0.00063298165,0.0016873452,0.00022542145],"domain_scores_gemma":[0.995754,0.0012674291,0.000488425,0.0006780198,0.001690414,0.00012168683],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.003603942,0.0018195907,0.0019485627,0.0025573485,0.0013311114,0.0018841191,0.0031353142,0.0013090974,0.009942781],"category_scores_gemma":[0.0070781275,0.0010303746,0.0009950375,0.0018790818,0.0007437507,0.0011565,0.0014372161,0.0025719027,0.007423895],"study_design_candidate":"simulation_or_modeling","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005677543,0.00038018962,0.004140684,0.0011767099,0.00019309123,0.0003219524,0.0007658582,0.016196799,0.52332526,0.01276883,0.029958159,0.41020474],"study_design_scores_gemma":[0.000100455705,0.00029970848,0.006725734,0.00011880012,0.00011663628,0.0010937713,0.00008733454,0.39766604,0.5240656,0.005115842,0.06433719,0.00027284748],"about_ca_topic_score_codex":0.001122392,"about_ca_topic_score_gemma":0.002106521,"teacher_disagreement_score":0.009942781,"about_ca_system_score_codex":0.0011240311,"about_ca_system_score_gemma":0.0019835776,"threshold_uncertainty_score":0.033261895},"labels":[],"label_agreement":null},{"id":"W2160365238","doi":"10.1007/s12575-010-9029-5","title":"Quick and Simple Detection Technique to Assess the Binding of Antimicrotubule Agents to the Colchicine-Binding Site","year":2010,"lang":"en","type":"article","venue":"Biological Procedures Online","topic":"Cancer therapeutics and mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":73,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval; Hôpital Saint-François d'Assise","funders":"","keywords":"Tubulin; Colchicine; Iodoacetamide; Binding site; Chemistry; Adduct; Microtubule; Biochemistry; Biology; Cysteine; Cell biology; Genetics; Organic chemistry","score_opus":0.0366281687727699,"score_gpt":0.3206340222591287,"score_spread":0.28400585348635876,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2160365238","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.23822397,0.023399826,0.7220442,0.0008064181,0.00077896885,0.0008276094,0.0011219328,0.0027533781,0.010043729],"genre_scores_gemma":[0.33361077,0.013065056,0.6285509,0.0005946917,0.0002025893,0.0013695342,0.002337202,0.00027724166,0.019992055],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9994318,0.00011917041,0.000037536418,0.00012757033,0.00022104192,0.00006289837],"domain_scores_gemma":[0.9992849,0.00020670581,0.00014225012,0.00007871682,0.00018223588,0.00010520543],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006270399,0.0010861601,0.00054494693,0.0012839002,0.0003853837,0.00030596848,0.0006534281,0.00086675864,0.003608364],"category_scores_gemma":[0.000534268,0.00050263345,0.00037878175,0.0004697145,0.00035541627,0.0004690255,0.000434627,0.0015256257,0.0015905753],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00001764526,0.00002170963,0.00012829604,0.00007648191,0.000006537874,0.000025595715,0.000008980374,0.000018381688,0.9962878,0.00005662488,0.00014033823,0.0032116238],"study_design_scores_gemma":[0.000016154638,0.0003496015,0.0036188865,0.000015957781,0.000029441826,0.00057627837,0.000028400113,0.00070974696,0.9862,0.00008333481,0.008354222,0.000018093715],"about_ca_topic_score_codex":0.0005296625,"about_ca_topic_score_gemma":0.0017640541,"teacher_disagreement_score":0.003608364,"about_ca_system_score_codex":0.0003290749,"about_ca_system_score_gemma":0.0004555312,"threshold_uncertainty_score":0.012071192},"labels":[],"label_agreement":null},{"id":"W2252284732","doi":"10.1186/s12575-015-0031-9","title":"Characterising protein/detergent complexes by triple-detection size-exclusion chromatography","year":2016,"lang":"en","type":"article","venue":"Biological Procedures Online","topic":"Environmental Chemistry and Analysis","field":"Environmental Science","cited_by":31,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"University of Toronto; Deutsche Forschungsgemeinschaft; Technische Universität Kaiserslautern; Carl-Zeiss-Stiftung","keywords":"Size-exclusion chromatography; Chromatography; Chemistry; Protein detection; Computational biology; Computer science; Biology; Biochemistry; Enzyme; Nanotechnology; Materials science","score_opus":0.010694671419743463,"score_gpt":0.22557139813988497,"score_spread":0.21487672672014152,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2252284732","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.31506753,0.0063154227,0.6673184,0.00045265476,0.00023957189,0.0014305144,0.0026112879,0.0026690124,0.0038955116],"genre_scores_gemma":[0.314887,0.0060300203,0.66384405,0.0005884414,0.00007708417,0.0015525352,0.0071067843,0.00075514434,0.0051589794],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9977545,0.00035548743,0.00029108435,0.0005204419,0.00086466194,0.00021385001],"domain_scores_gemma":[0.9973717,0.00093905535,0.0003390518,0.0003087832,0.00082114455,0.000220334],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.002074706,0.0016113812,0.0009244331,0.0017280804,0.00053227926,0.0010895312,0.0014320156,0.00086097413,0.0014484173],"category_scores_gemma":[0.0027964555,0.00038605955,0.0008351416,0.0008807103,0.0008657273,0.00090684654,0.0007285234,0.0018287906,0.0021703546],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000053023385,0.00004386885,0.00037703878,0.00014416591,0.00002491385,0.0000583487,0.00004829234,0.000092309034,0.993493,0.00018413656,0.0001411704,0.005339761],"study_design_scores_gemma":[0.0000043020696,0.00007356493,0.0008317278,0.000018657938,0.000020178813,0.000190774,0.000023384695,0.0012154304,0.9946078,0.0001431458,0.0028547735,0.000016368485],"about_ca_topic_score_codex":0.0006624322,"about_ca_topic_score_gemma":0.0012745236,"teacher_disagreement_score":0.002074706,"about_ca_system_score_codex":0.0005251777,"about_ca_system_score_gemma":0.0007469719,"threshold_uncertainty_score":0.010972202},"labels":[],"label_agreement":null},{"id":"W2492349302","doi":"10.1186/s12575-016-0046-x","title":"Fluorescence ImmunoPrecipitation (FLIP): a Novel Assay for High-Throughput IP","year":2016,"lang":"en","type":"article","venue":"Biological Procedures Online","topic":"Monoclonal and Polyclonal Antibodies Research","field":"Medicine","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institutes of Health; National Human Genome Research Institute; University of Toronto; Wellcome Trust; NYU Langone Medical Center","keywords":"Immunoprecipitation; Monoclonal antibody; Throughput; Computer science; Flip; Computational biology; Chemistry; Molecular biology; Antibody; Biology; Biochemistry; Immunology; Telecommunications","score_opus":0.06979961070105586,"score_gpt":0.3530211193408688,"score_spread":0.283221508639813,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2492349302","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.113471165,0.00997719,0.8573246,0.0013633502,0.0009900609,0.0010441237,0.0034481136,0.00449788,0.0078834295],"genre_scores_gemma":[0.40086913,0.008822482,0.56606495,0.0010105561,0.0011153587,0.0028030234,0.006738875,0.0006974636,0.011878156],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99658394,0.00074015866,0.00022433851,0.0007203463,0.0014179428,0.0003132956],"domain_scores_gemma":[0.9975612,0.0007137714,0.0004956521,0.00042413792,0.00058256375,0.00022264934],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.002328056,0.002093426,0.0012114409,0.0023563404,0.00086031965,0.0015735383,0.0023012573,0.0019014421,0.00324415],"category_scores_gemma":[0.0021817156,0.0006758045,0.0011028333,0.0010733814,0.0012175791,0.00184627,0.0016523619,0.0026064499,0.0028750694],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00030578274,0.00021563782,0.0014041231,0.000575898,0.00007838993,0.00018627722,0.00006393608,0.0004966405,0.9664352,0.0013547324,0.0029962654,0.025887258],"study_design_scores_gemma":[0.000037634163,0.0004980668,0.0035931477,0.00006831696,0.0001111211,0.001847084,0.000037732163,0.00611818,0.9684405,0.00073434727,0.01842795,0.00008591606],"about_ca_topic_score_codex":0.0002714984,"about_ca_topic_score_gemma":0.00047060655,"teacher_disagreement_score":0.00324415,"about_ca_system_score_codex":0.001050592,"about_ca_system_score_gemma":0.0006430629,"threshold_uncertainty_score":0.012312055},"labels":[],"label_agreement":null},{"id":"W2796780143","doi":"10.1186/s12575-018-0070-0","title":"Visualisation of Multiple Tight Junctional Complexes in Human Airway Epithelial Cells","year":2018,"lang":"en","type":"article","venue":"Biological Procedures Online","topic":"Barrier Structure and Function Studies","field":"Neuroscience","cited_by":46,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"National Health and Medical Research Council; Medical Research Council","keywords":"Occludin; Tight junction; Paraformaldehyde; Staining; Cell biology; Fixation (population genetics); Paracellular transport; Epithelium; Chemistry; Respiratory epithelium; Biology; Pathology; Biochemistry; Medicine; Membrane; Permeability (electromagnetism)","score_opus":0.07288457500750145,"score_gpt":0.3237383093511391,"score_spread":0.25085373434363767,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2796780143","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8688106,0.014341473,0.10529602,0.00048116292,0.00015219607,0.0002557524,0.0014148289,0.000557769,0.008690243],"genre_scores_gemma":[0.87241954,0.0077437717,0.10877614,0.0002475687,0.000058014546,0.00044452987,0.0018754321,0.00014718798,0.008287849],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99964213,0.0000662194,0.000031670705,0.000091198555,0.000111763635,0.000056995425],"domain_scores_gemma":[0.9998858,0.00003648064,0.000018516866,0.000014978194,0.000028653923,0.000015606467],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00035379847,0.00028898643,0.00026942955,0.0005952485,0.00032769179,0.00046196283,0.00029896008,0.00064038165,0.0023813103],"category_scores_gemma":[0.00016795627,0.00025877258,0.0002910777,0.000478944,0.00018224891,0.0003143768,0.00049248413,0.0005907653,0.0010475692],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000028246692,0.000007454524,0.000107201166,0.00007356412,0.000003603092,0.00007597722,0.00004636154,0.00003349065,0.9985876,0.00007615117,0.00003381396,0.0009266646],"study_design_scores_gemma":[0.000025780764,0.00038186568,0.016813608,0.00008101157,0.000054146905,0.0022400727,0.00023490126,0.0029914114,0.9643199,0.00026980584,0.012568,0.00001949253],"about_ca_topic_score_codex":0.00056261924,"about_ca_topic_score_gemma":0.00087507954,"teacher_disagreement_score":0.0023813103,"about_ca_system_score_codex":0.00023129134,"about_ca_system_score_gemma":0.00017394173,"threshold_uncertainty_score":0.00796634},"labels":[],"label_agreement":null},{"id":"W2896220657","doi":"10.1186/s12575-018-0085-6","title":"Three-Dimensional Quantification of Spheroid Degradation-Dependent Invasion and Invadopodia Formation","year":2018,"lang":"en","type":"article","venue":"Biological Procedures Online","topic":"Cellular Mechanics and Interactions","field":"Biochemistry, Genetics and Molecular Biology","cited_by":18,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Sunnybrook Health Science Centre; University of Toronto","funders":"Faculty of Dentistry, University of Toronto; Canadian Cancer Society Research Institute; University of Toronto","keywords":"Invadopodia; Spheroid; Cell biology; Matrix (chemical analysis); Matrix metalloproteinase; Basement membrane; Tumor microenvironment; Cancer cell; In vitro; Cell; Biophysics; Cancer; Chemistry; Biology; Cancer research; Tumor cells; Biochemistry","score_opus":0.03914196205886246,"score_gpt":0.2780818538295296,"score_spread":0.23893989177066716,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2896220657","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.7511057,0.0038488049,0.23395176,0.00017736423,0.000103915736,0.0003536373,0.003183267,0.0012195769,0.0060558426],"genre_scores_gemma":[0.7593152,0.0036128724,0.22680245,0.000109552624,0.000026861877,0.0009344523,0.0035995438,0.00023170382,0.0053673983],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9992855,0.00012645747,0.0000771159,0.00010671538,0.00034035888,0.000063935295],"domain_scores_gemma":[0.9993117,0.00024002593,0.00012212078,0.000080727215,0.00015503196,0.000090505346],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007158138,0.00061914575,0.0004227905,0.0012496903,0.0004949864,0.0005210956,0.000279138,0.00062196306,0.0012114033],"category_scores_gemma":[0.00045368492,0.00027713485,0.00040192832,0.0009501894,0.00045357077,0.00037262848,0.00042235103,0.0010419372,0.00040295956],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00003466592,0.000035879075,0.0005277349,0.00007481565,0.000010088571,0.000033503562,0.00010094841,0.0003678645,0.9963742,0.00032142646,0.00008344156,0.002035403],"study_design_scores_gemma":[0.0000072958655,0.000069492504,0.010721734,0.000009708381,0.000022155646,0.0001840177,0.00005749424,0.012779844,0.9738981,0.0002065737,0.0020216764,0.000021813197],"about_ca_topic_score_codex":0.0014901728,"about_ca_topic_score_gemma":0.0026127507,"teacher_disagreement_score":0.0014901728,"about_ca_system_score_codex":0.0005424845,"about_ca_system_score_gemma":0.0004449223,"threshold_uncertainty_score":0.0040525794},"labels":[],"label_agreement":null},{"id":"W2947531257","doi":"10.1186/s12575-019-0100-6","title":"Correction to: Three-Dimensional Quantification of Spheroid Degradation-Dependent Invasion and Invadopodia Formation","year":2019,"lang":"en","type":"erratum","venue":"Biological Procedures Online","topic":"Genetics, Aging, and Longevity in Model Organisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Sunnybrook Health Science Centre; University of Toronto","funders":"","keywords":"Invadopodia; Spheroid; Degradation (telecommunications); Computer science; Cell biology; Chemistry; Biophysics; Computational biology; Biology; Biochemistry; Cancer; Telecommunications","score_opus":0.02894370549991807,"score_gpt":0.2610039719789413,"score_spread":0.23206026647902325,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2947531257","genre_codex":"editorial","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00064263155,0.0008511427,0.0072333566,0.023461178,0.95285213,0.000070522976,0.0063689733,0.0039608907,0.0045592054],"genre_scores_gemma":[0.038188364,0.006467753,0.07542072,0.049131725,0.2100412,0.000951445,0.040884923,0.030790403,0.54812336],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99316216,0.00089031766,0.00134365,0.00095490506,0.0032049434,0.00044408924],"domain_scores_gemma":[0.94299316,0.01039635,0.0024680372,0.005194255,0.036488958,0.0024592055],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.005849986,0.0026582517,0.0018793974,0.0069469563,0.0032534823,0.0040851044,0.0037252412,0.004662159,0.18276763],"category_scores_gemma":[0.06777119,0.0016697453,0.0018288768,0.003637877,0.0019106305,0.002531056,0.0029176304,0.008139763,0.08273785],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006192366,0.000011236911,0.0001102563,0.00016329502,0.000012143407,0.000162457,0.000028415521,0.00004498276,0.0004101974,0.0006066075,0.98997456,0.0084139835],"study_design_scores_gemma":[0.000054950473,0.000029164026,0.0012248346,0.0002431023,0.000044660745,0.0007703035,0.0000773762,0.00058134523,0.0024286513,0.0018325264,0.99264103,0.000071980525],"about_ca_topic_score_codex":0.0065498464,"about_ca_topic_score_gemma":0.011533014,"teacher_disagreement_score":0.18276763,"about_ca_system_score_codex":0.002998698,"about_ca_system_score_gemma":0.004315985,"threshold_uncertainty_score":0.6114186},"labels":[],"label_agreement":null},{"id":"W4211184056","doi":"10.1186/s12575-022-00164-0","title":"Genetic engineering of novel yellow color african violet (Saintpaulia ionantha) produced by accumulation of Aureusidin 6-O-glucoside","year":2022,"lang":"en","type":"article","venue":"Biological Procedures Online","topic":"Plant Gene Expression Analysis","field":"Biochemistry, Genetics and Molecular Biology","cited_by":19,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"McGill University","keywords":"Petal; Chalcone synthase; Biology; Anthocyanin; Botany; Ornamental plant; Antirrhinum majus; Transformation (genetics); Gene; Genetically modified crops; White (mutation); Transgene; Genetics; Gene expression","score_opus":0.035283896682759455,"score_gpt":0.2878629043255351,"score_spread":0.25257900764277563,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4211184056","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98254204,0.00033577575,0.015056982,0.00006343767,0.000025776448,0.00005705746,0.00025778427,0.00016493599,0.0014961777],"genre_scores_gemma":[0.98169976,0.00057420915,0.0124342255,0.000036142683,0.000008120151,0.000043528435,0.00061025,0.00008612065,0.004507632],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999057,0.000013226115,0.000006824198,0.000025727006,0.000030191262,0.000018370558],"domain_scores_gemma":[0.99988556,0.000015039552,0.000051629562,0.000009458905,0.000010198247,0.000028089571],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013214766,0.00041743793,0.00023916866,0.0003108964,0.00013143661,0.00026174475,0.0002812304,0.00023177038,0.000566547],"category_scores_gemma":[0.000080987025,0.00015447926,0.0003427459,0.0002546403,0.0001593369,0.0001460836,0.00034035585,0.00045614067,0.00016379423],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000015982274,0.000010594703,0.00008172298,0.000014985006,0.0000032760288,0.000033551103,0.000008482587,0.000062920095,0.9991392,0.00007325908,0.0000055637165,0.0005504081],"study_design_scores_gemma":[0.000020831681,0.00028542874,0.0062724394,0.000008771749,0.000050327093,0.00041904923,0.000041632164,0.0033304065,0.98472184,0.00012761231,0.0047110165,0.000010717996],"about_ca_topic_score_codex":0.00042744863,"about_ca_topic_score_gemma":0.0005861421,"teacher_disagreement_score":0.000566547,"about_ca_system_score_codex":0.0002545204,"about_ca_system_score_gemma":0.00024419368,"threshold_uncertainty_score":0.0018952489},"labels":[],"label_agreement":null},{"id":"W4283459037","doi":"10.1186/s12575-022-00170-2","title":"A novel 7 RNA-based signature for prediction of prognosis and therapeutic responses of wild-type BRAF cutaneous melanoma","year":2022,"lang":"en","type":"article","venue":"Biological Procedures Online","topic":"Melanoma and MAPK Pathways","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"SKiN Health","funders":"","keywords":"Melanoma; Signature (topology); Computational biology; RNA; Cancer research; Biology; Bioinformatics; Medicine; Gene; Genetics; Mathematics","score_opus":0.03382879992296209,"score_gpt":0.26695094034701516,"score_spread":0.23312214042405308,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4283459037","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9395152,0.0025386522,0.045558922,0.00044220273,0.0001241137,0.00022442926,0.00658632,0.0007900905,0.0042201397],"genre_scores_gemma":[0.97232246,0.00033207895,0.022134159,0.00016686469,0.000073123796,0.00011666554,0.004060264,0.00002872831,0.0007656073],"study_design_codex":"observational","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99955326,0.00008530897,0.000058534064,0.0001044775,0.00013872271,0.000059764643],"domain_scores_gemma":[0.99879956,0.00039078668,0.00036049483,0.00006692442,0.00027187908,0.000110398236],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00071506784,0.00054993946,0.0005407471,0.0020749834,0.00020867249,0.0006862689,0.0003041867,0.0005265777,0.001477108],"category_scores_gemma":[0.0018270193,0.000106986176,0.0005185026,0.0007807178,0.00020174685,0.00032815352,0.0003192739,0.0003417287,0.0006233702],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0032216792,0.0005421217,0.582353,0.00060740113,0.00055993674,0.001280247,0.00014971066,0.023455067,0.15674844,0.0011380347,0.0042467075,0.22569764],"study_design_scores_gemma":[0.00022175327,0.0027858135,0.4513152,0.00023190149,0.0012354094,0.0057864934,0.00028442743,0.41581762,0.10451628,0.005778459,0.011851622,0.00017499468],"about_ca_topic_score_codex":0.000624484,"about_ca_topic_score_gemma":0.0012172045,"teacher_disagreement_score":0.0020749834,"about_ca_system_score_codex":0.00037147998,"about_ca_system_score_gemma":0.00048604433,"threshold_uncertainty_score":0.0049414635},"labels":[],"label_agreement":null},{"id":"W4307560932","doi":"10.1186/s12575-022-00178-8","title":"Shrimp miR-965 transfers tumoricidal mitochondria","year":2022,"lang":"en","type":"article","venue":"Biological Procedures Online","topic":"Mitochondrial Function and Pathology","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Toronto General Hospital; University of Toronto; University Health Network","funders":"Ministry of Science and ICT, South Korea; National Research Foundation of Korea; National Research Foundation","keywords":"Mitochondrion; Apoptosis; Cell biology; Programmed cell death; Chemistry; Biology; Cancer research; Biochemistry","score_opus":0.023522518381933612,"score_gpt":0.2651972234192997,"score_spread":0.24167470503736607,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4307560932","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.989106,0.0005792788,0.008393844,0.00008872682,0.000073653006,0.000028278906,0.00019114467,0.00013681772,0.001402167],"genre_scores_gemma":[0.99241155,0.00023987162,0.0047221202,0.000040847975,0.000008459754,0.000022989327,0.0002033038,0.000016701328,0.0023341582],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999188,0.00000797707,0.000007509344,0.0000311086,0.00002433652,0.0000102108],"domain_scores_gemma":[0.9999397,0.000010019264,0.000026594133,0.0000072538096,0.000005945826,0.000010529087],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000108019485,0.00026031968,0.00011542872,0.00010787681,0.00013048542,0.00020019434,0.0001619372,0.00028458197,0.00088411756],"category_scores_gemma":[0.000112937836,0.00008590959,0.00015793409,0.000057786558,0.0001753044,0.00018618439,0.00023399657,0.0003164698,0.0002348085],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000019996547,0.0000041620237,0.00006127499,0.000015452708,0.0000011618947,0.000015330306,0.0000069046137,0.000029212188,0.99928904,0.000043978373,0.000010590261,0.0005029074],"study_design_scores_gemma":[0.0000031950779,0.0001069048,0.00048887794,0.0000021237902,0.000004517196,0.000047650377,0.000007502117,0.0004376919,0.9979157,0.000017024033,0.0009667974,0.0000020055722],"about_ca_topic_score_codex":0.00015008221,"about_ca_topic_score_gemma":0.00019141416,"teacher_disagreement_score":0.00088411756,"about_ca_system_score_codex":0.00016168758,"about_ca_system_score_gemma":0.00009453254,"threshold_uncertainty_score":0.002957642},"labels":[],"label_agreement":null}]}