{"meta":{"query_hash":"f1a95e232963","filters":{"venue":"Clinical Epigenetics"},"cohort_total":145,"direct_labels_cover":0,"predictions_cover":145,"exported":145,"export_cap":100000,"truncated":false,"label_status":"direct model label, unvalidated","prediction_status":"machine_predicted_unvalidated (Codex and Gemma teacher distillation)","score_status":"score_only:v0-immature-baseline","snapshot":{"source":"OpenAlex, pinned release, all 482 partitions","release":"2026-06-24","frame_built":"2026-07-12"},"permalink":"https://metacan.xera.ac/q/f1a95e232963","api":"https://metacan.xera.ac/api/v1/cohort?venue=Clinical+Epigenetics"},"results":[{"id":"W1922821260","doi":"10.1186/s13148-015-0114-0","title":"DNA methylation signature of interleukin 1 receptor type II in asthma","year":2015,"lang":"en","type":"article","venue":"Clinical Epigenetics","topic":"IL-33, ST2, and ILC Pathways","field":"Immunology and Microbiology","cited_by":13,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Sherbrooke; Université du Québec à Chicoutimi","funders":"Fonds de Recherche du Québec - Santé; Canadian Institutes of Health Research; Université de Sherbrooke","keywords":"DNA methylation; Interleukin 1 receptor, type II; Interleukin 1 receptor, type I; Methylation; Promoter; Gene; Biology; Epigenetics; Genetics; Molecular biology; Immunology; Gene expression; Interleukin; Interleukin 5; Interleukin-21 receptor; Cytokine","score_opus":0.07982480183943977,"score_gpt":0.34632160628964875,"score_spread":0.26649680445020896,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1922821260","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99467885,0.002563186,0.0010477345,0.00007824802,0.000010928622,0.000011172742,0.00047528534,0.00002150723,0.0011131701],"genre_scores_gemma":[0.9983419,0.00040296974,0.00031678798,0.000032515836,0.0000068915797,0.000009576684,0.00022425574,0.0000043149157,0.00066069857],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99990046,0.000027704147,0.000005535764,0.000031251653,0.000018241344,0.00001683243],"domain_scores_gemma":[0.9998857,0.000026466145,0.00004892769,0.000008812063,0.000016189295,0.0000139869035],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012407785,0.000111236084,0.00016144541,0.0003631176,0.000097859,0.00015988234,0.000087917775,0.00015084547,0.0018143082],"category_scores_gemma":[0.00028945794,0.000088917724,0.00009374652,0.00020479863,0.00011389452,0.000054443557,0.00011277049,0.00016192673,0.00022823278],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00075137557,0.000033031938,0.12022516,0.00011844985,0.000110156354,0.0002847679,0.00026406822,0.00012958971,0.859899,0.00018682715,0.00025943996,0.017738027],"study_design_scores_gemma":[0.000018590472,0.00023078755,0.94174176,0.00002042773,0.000096730866,0.0013962461,0.00014590695,0.00054875197,0.05358816,0.00031875784,0.0018832041,0.000010639356],"about_ca_topic_score_codex":0.0007439655,"about_ca_topic_score_gemma":0.001359544,"teacher_disagreement_score":0.0018143082,"about_ca_system_score_codex":0.00009498706,"about_ca_system_score_gemma":0.00008168102,"threshold_uncertainty_score":0.0060694814},"labels":[],"label_agreement":null},{"id":"W1995004015","doi":"10.1186/s13148-015-0079-z","title":"Risk of re-identification of epigenetic methylation data: a more nuanced response is needed","year":2015,"lang":"en","type":"article","venue":"Clinical Epigenetics","topic":"Epigenetics and DNA Methylation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":15,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; McGill University and Génome Québec Innovation Centre; McGill University Health Centre","funders":"Canadian Institutes of Health Research","keywords":"Epigenetics; Identification (biology); DNA methylation; Human genetics; Methylation; Data sharing; Bioinformatics; Data science; Medicine; Psychology; Biology; Genetics; Computer science; Alternative medicine; Pathology","score_opus":0.1262304886567244,"score_gpt":0.42359321856822285,"score_spread":0.2973627299114985,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1995004015","genre_codex":"commentary","genre_gemma":"commentary","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"commentary","genre_consensus":"commentary","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00013243979,0.000874241,0.0006112255,0.97982615,0.018252179,0.000009199694,0.000016638553,0.000027554177,0.00025042743],"genre_scores_gemma":[0.0023119969,0.0009866317,0.0022328785,0.9481756,0.045518313,0.000033263776,0.000013752304,0.000054254135,0.00067330897],"study_design_codex":"not_applicable","study_design_gemma":"theoretical_or_conceptual","domain_scores_codex":[0.9088958,0.038014073,0.019987917,0.0077232886,0.022053247,0.003325845],"domain_scores_gemma":[0.5692345,0.32641882,0.025560312,0.010922967,0.056877103,0.010986322],"candidate_categories":["research_integrity"],"consensus_categories":[],"category_scores_codex":[0.09166303,0.0013147027,0.0032401138,0.0013167835,0.006337312,0.010581491,0.0062403986,0.08478871,0.0047681006],"category_scores_gemma":[0.3218306,0.0015678924,0.0025462976,0.001358467,0.016511481,0.01598929,0.0065529095,0.09512876,0.0038624352],"study_design_candidate":"theoretical_or_conceptual","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010918002,0.00006111987,0.0010045351,0.00047813696,0.00009614349,0.0024806273,0.0017436615,0.00022710368,0.0006717492,0.01211706,0.9539296,0.02708099],"study_design_scores_gemma":[0.00008945907,0.00010984026,0.001087427,0.0015042614,0.000099156816,0.0047876206,0.0033171547,0.0008343498,0.00096678006,0.042752985,0.94414306,0.00030777892],"about_ca_topic_score_codex":0.0024174904,"about_ca_topic_score_gemma":0.0030217292,"teacher_disagreement_score":0.9152113,"about_ca_system_score_codex":0.004696863,"about_ca_system_score_gemma":0.012108043,"threshold_uncertainty_score":0.48476624},"labels":[],"label_agreement":null},{"id":"W1997423100","doi":"10.1186/s13148-015-0074-4","title":"Polycomb-mediated silencing in neuroendocrine prostate cancer","year":2015,"lang":"en","type":"article","venue":"Clinical Epigenetics","topic":"Prostate Cancer Treatment and Research","field":"Medicine","cited_by":119,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Occupational Cancer Research Centre; BC Cancer Agency; Vancouver General Hospital; University of British Columbia","funders":"Canadian Cancer Society Research Institute; Canadian Institutes of Health Research; BC Cancer Foundation; Michael Smith Health Research BC; Prostate Cancer Canada","keywords":"Epigenetics; Gene silencing; Prostate cancer; Biology; Cancer research; Downregulation and upregulation; EZH2; Repressor; Cancer; Genetics; Gene; Gene expression","score_opus":0.1459865484202626,"score_gpt":0.45257233560370635,"score_spread":0.30658578718344376,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1997423100","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9756444,0.011754407,0.006083929,0.00020181047,0.000038645056,0.000059894715,0.00357557,0.00027627952,0.002365119],"genre_scores_gemma":[0.99230194,0.0023121596,0.0014524051,0.00007470341,0.000012959994,0.000032028274,0.0028644812,0.000018794686,0.0009305034],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998621,0.000015833242,0.00001182959,0.00004322745,0.000051033672,0.000016034033],"domain_scores_gemma":[0.99980456,0.00003991484,0.00008018781,0.000028021132,0.000020936082,0.000026360522],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001896854,0.00023089255,0.00020486933,0.00036959015,0.00015148922,0.00033703892,0.00019362535,0.00012358109,0.0010546492],"category_scores_gemma":[0.00022821383,0.00008019515,0.00018507728,0.00043585943,0.00024670942,0.00011800502,0.00030830278,0.00033173087,0.0002190831],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00041406826,0.00004234777,0.029574178,0.0004356852,0.00015613076,0.0003240496,0.00008566763,0.00086730666,0.9436734,0.00044020457,0.00075129466,0.023235645],"study_design_scores_gemma":[0.000068553076,0.0012569753,0.4601835,0.000070252354,0.00040923766,0.0044635506,0.00019502785,0.008188557,0.48895314,0.0010691416,0.035097808,0.000044298056],"about_ca_topic_score_codex":0.00075987255,"about_ca_topic_score_gemma":0.00175728,"teacher_disagreement_score":0.0010546492,"about_ca_system_score_codex":0.0002790542,"about_ca_system_score_gemma":0.00021533835,"threshold_uncertainty_score":0.0035281181},"labels":[],"label_agreement":null},{"id":"W2046898367","doi":"10.1007/s13148-010-0019-x","title":"5-Aza-2′-deoxycytidine stress response and apoptosis in prostate cancer","year":2011,"lang":"en","type":"article","venue":"Clinical Epigenetics","topic":"Epigenetics and DNA Methylation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":28,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Northern California Institute for Research and Education; Università degli Studi di Parma; McGill University; U.S. Department of Veterans Affairs","keywords":"Apoptosis; DNA methylation; Cancer research; CpG site; Epigenetics; Biology; DNA demethylation; Programmed cell death; Molecular biology; Cell biology; Chemistry; Gene; Genetics; Gene expression","score_opus":0.05792758155835415,"score_gpt":0.35615841635564816,"score_spread":0.298230834797294,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2046898367","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9574573,0.03771519,0.0018454052,0.00020321549,0.00004251373,0.00002782912,0.00027450462,0.000059000893,0.0023751343],"genre_scores_gemma":[0.99325585,0.004736606,0.00044081718,0.000040705054,0.0000137446195,0.000014439185,0.00019149814,0.0000019744373,0.0013043778],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999076,0.00002812139,0.000006613634,0.000014426065,0.000025163681,0.000018119137],"domain_scores_gemma":[0.99995327,0.000007729814,0.000011691488,0.0000047656613,0.000010210858,0.00001234275],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013386054,0.00013275174,0.00015443345,0.00030558713,0.00012516946,0.0001949406,0.00011925397,0.00020469417,0.0008447442],"category_scores_gemma":[0.00007833324,0.00009282354,0.000112399575,0.00016786405,0.00012611641,0.00008388206,0.00009070383,0.00028196792,0.00014480065],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00033096247,0.000047877373,0.0024038947,0.00010644673,0.000018320037,0.00017896567,0.00003775572,0.00018798042,0.9889431,0.0002576395,0.00009703164,0.0073900935],"study_design_scores_gemma":[0.00003385626,0.0015867068,0.073702216,0.000017936498,0.000035754016,0.0016859538,0.0000953797,0.00095949497,0.9140042,0.00025280396,0.007617405,0.000008283757],"about_ca_topic_score_codex":0.0007766552,"about_ca_topic_score_gemma":0.001294873,"teacher_disagreement_score":0.0008447442,"about_ca_system_score_codex":0.0003004814,"about_ca_system_score_gemma":0.00019091416,"threshold_uncertainty_score":0.0028259754},"labels":[],"label_agreement":null},{"id":"W2096167978","doi":"10.1186/1868-7083-6-15","title":"High-throughput DNA analysis shows the importance of methylation in the control of immune inflammatory gene transcription in chronic periodontitis","year":2014,"lang":"en","type":"article","venue":"Clinical Epigenetics","topic":"Oral microbiology and periodontitis research","field":"Dentistry","cited_by":38,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Princess Margaret Cancer Centre; University Health Network","funders":"Fundação de Amparo à Pesquisa do Estado de São Paulo","keywords":"DNA methylation; Periodontitis; Methylation; Gene; Biology; Chronic periodontitis; Microarray; Microarray analysis techniques; Gene expression; Epigenetics; Genetics; Immune system; Promoter; DNA microarray; Medicine; Internal medicine","score_opus":0.03209799339958305,"score_gpt":0.3427519586037755,"score_spread":0.3106539652041924,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2096167978","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9416409,0.0066513307,0.03993034,0.00031428013,0.000042685813,0.00004224157,0.00988824,0.00046134638,0.001028688],"genre_scores_gemma":[0.9537705,0.002393046,0.0306197,0.00020178362,0.000055926143,0.00012258372,0.011406393,0.00007889356,0.0013512435],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99941707,0.00006858006,0.000028728302,0.00023440705,0.00019088098,0.000060373077],"domain_scores_gemma":[0.99939203,0.0002580273,0.00016605356,0.000060847153,0.000094361705,0.00002867377],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00063857186,0.0003075184,0.00049724383,0.00068319956,0.00034972737,0.0006115233,0.00029189026,0.00038552718,0.0014703625],"category_scores_gemma":[0.0008364449,0.0002054656,0.0005874859,0.0010053373,0.00023707743,0.0002342575,0.00034465746,0.00059713784,0.00045811],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000671823,0.000059846607,0.033334304,0.00047246338,0.0002520492,0.000053418156,0.00011254871,0.0016004738,0.93857366,0.00016801133,0.0005041044,0.024197279],"study_design_scores_gemma":[0.000041456933,0.00057129713,0.6392584,0.00005280627,0.00050679303,0.0004578498,0.0001248936,0.01381245,0.3352426,0.0011816629,0.008685691,0.00006408122],"about_ca_topic_score_codex":0.0017503309,"about_ca_topic_score_gemma":0.0034375766,"teacher_disagreement_score":0.0017503309,"about_ca_system_score_codex":0.00039953802,"about_ca_system_score_gemma":0.00025731805,"threshold_uncertainty_score":0.0049188137},"labels":[],"label_agreement":null},{"id":"W2107949981","doi":"10.1186/s13148-015-0129-6","title":"Nucleated red blood cells impact DNA methylation and expression analyses of cord blood hematopoietic cells","year":2015,"lang":"en","type":"article","venue":"Clinical Epigenetics","topic":"Acute Myeloid Leukemia Research","field":"Medicine","cited_by":67,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Child and Family Research Institute; University of British Columbia","funders":"Canadian Institutes of Health Research; Mitacs; BC Children's Hospital; Michael Smith Health Research BC; Child and Family Research Institute","keywords":"dNaM; Nucleated Red Blood Cell; Cord blood; Biology; DNA methylation; Haematopoiesis; Epigenetics; Immune system; Cell sorting; Immunology; Transcriptome; Blood cell; Molecular biology; Stem cell; Flow cytometry; Cell biology; Genetics; Fetus; Gene expression; Gene","score_opus":0.15117686396579272,"score_gpt":0.4526627684138403,"score_spread":0.30148590444804757,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2107949981","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98095804,0.0024154047,0.01283743,0.00010576381,0.00002403051,0.000053823307,0.001750001,0.0002012075,0.0016541925],"genre_scores_gemma":[0.9808338,0.0008388039,0.014385725,0.00014795309,0.0000116844185,0.00008131086,0.0023268787,0.00006117739,0.0013125862],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9996419,0.0000539754,0.000024120836,0.00012585276,0.000112482056,0.00004175508],"domain_scores_gemma":[0.9997781,0.000059196704,0.00006028429,0.0000289288,0.000046482197,0.000026971295],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00034133912,0.00024877457,0.00020049827,0.00032311873,0.00016394595,0.00029795818,0.00021480436,0.00022160987,0.0017068557],"category_scores_gemma":[0.0005427082,0.00010551708,0.00015281247,0.0002946783,0.00020637386,0.0000804786,0.0002959179,0.00034742578,0.0003639346],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00016585221,0.000011637326,0.006909643,0.000068026224,0.00001788106,0.000029340168,0.000043385164,0.000092630864,0.9848007,0.000047343172,0.0000595862,0.007754005],"study_design_scores_gemma":[0.0000097072325,0.00019575322,0.07587776,0.000023383245,0.00007068082,0.0003888721,0.000052619936,0.001480329,0.9184532,0.00010625991,0.0033337306,0.00000762943],"about_ca_topic_score_codex":0.0016927724,"about_ca_topic_score_gemma":0.0027993158,"teacher_disagreement_score":0.0017068557,"about_ca_system_score_codex":0.0003234368,"about_ca_system_score_gemma":0.00023245288,"threshold_uncertainty_score":0.0057100654},"labels":[],"label_agreement":null},{"id":"W2117019171","doi":"10.1186/1868-7083-5-14","title":"Reduced expression of brain cannabinoid receptor 1 (Cnr1) is coupled with an increased complementary micro-RNA (miR-26b) in a mouse model of fetal alcohol spectrum disorders","year":2013,"lang":"en","type":"article","venue":"Clinical Epigenetics","topic":"Prenatal Substance Exposure Effects","field":"Medicine","cited_by":39,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Western University","funders":"","keywords":"Fetal alcohol; Cannabinoid receptor; Cannabinoid; Human genetics; microRNA; Alcohol; Medicine; Receptor; Neuroscience; Bioinformatics; Pharmacology; Biology; Internal medicine; Genetics; Gene; Biochemistry","score_opus":0.03142729754389782,"score_gpt":0.3204488175817667,"score_spread":0.28902152003786885,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2117019171","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9929535,0.00079085,0.0037410697,0.00029532085,0.000074221105,0.000040753635,0.0008174236,0.00021694919,0.0010699879],"genre_scores_gemma":[0.9844163,0.0011104273,0.0062779216,0.00014070496,0.000017235921,0.00013091588,0.0006450183,0.00010022919,0.007161264],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99963963,0.000038976166,0.00003245998,0.00011166118,0.00012017578,0.00005715667],"domain_scores_gemma":[0.99964774,0.000032826338,0.00015614758,0.00002789668,0.000021373344,0.00011407104],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00021075,0.00072726334,0.00036461215,0.0013072193,0.00031399907,0.00030127453,0.0004561489,0.0006389795,0.0028937855],"category_scores_gemma":[0.0001697759,0.0003710641,0.00034318384,0.00027568042,0.00075963984,0.00022142209,0.00029450975,0.0010838298,0.00045975906],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00027516717,0.00007947944,0.0003017406,0.000030179139,0.000008058434,0.00015777731,0.000023086688,0.000053370204,0.9980697,0.000136056,0.000042975422,0.0008224609],"study_design_scores_gemma":[0.00006646842,0.00075996236,0.008544043,0.000019586441,0.000059109047,0.0011113551,0.00008028763,0.001048723,0.9864611,0.00013881271,0.0016955712,0.000014952307],"about_ca_topic_score_codex":0.001942109,"about_ca_topic_score_gemma":0.002910304,"teacher_disagreement_score":0.0028937855,"about_ca_system_score_codex":0.0006603937,"about_ca_system_score_gemma":0.00037695866,"threshold_uncertainty_score":0.009680629},"labels":[],"label_agreement":null},{"id":"W2118667725","doi":"10.1186/1868-7083-6-1","title":"The effects of olanzapine on genome-wide DNA methylation in the hippocampus and cerebellum","year":2014,"lang":"en","type":"article","venue":"Clinical Epigenetics","topic":"Epigenetics and DNA Methylation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":89,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Western University","funders":"","keywords":"DNA methylation; Biology; Epigenetics; Methylation; Methylated DNA immunoprecipitation; Gene; Genetics; Gene expression","score_opus":0.013668636413214174,"score_gpt":0.3002691831916813,"score_spread":0.2866005467784671,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2118667725","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9959372,0.0022345022,0.00038710583,0.00010057528,0.000015096489,0.000010966873,0.0006605989,0.000061450424,0.0005923917],"genre_scores_gemma":[0.9979144,0.0006649015,0.00032329242,0.000047882684,0.0000037207926,0.000015272512,0.00039292997,0.000009551061,0.0006280994],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999181,0.000010890663,0.0000061739333,0.00002372754,0.000022262491,0.000018811064],"domain_scores_gemma":[0.99990845,0.0000093408,0.000040993124,0.0000069721045,0.000012451128,0.00002186573],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00010082192,0.00029132393,0.00019840126,0.00033068383,0.00011255144,0.00019743995,0.00017752698,0.00017676687,0.001332626],"category_scores_gemma":[0.0001314726,0.000082100836,0.00025811567,0.00015066593,0.00012254983,0.00007456113,0.00014566409,0.00023975795,0.00012072491],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.003293254,0.000068046975,0.008692122,0.00012660872,0.00010343795,0.00011235689,0.000040298084,0.00015693183,0.97705483,0.000036665693,0.00015650288,0.010158865],"study_design_scores_gemma":[0.00013853257,0.0026190707,0.47791582,0.00003365276,0.00039552388,0.00082082255,0.00018747344,0.0011960964,0.5142761,0.00018936385,0.0022023513,0.000025109792],"about_ca_topic_score_codex":0.0033921248,"about_ca_topic_score_gemma":0.0070137316,"teacher_disagreement_score":0.0033921248,"about_ca_system_score_codex":0.00047202987,"about_ca_system_score_gemma":0.00025272276,"threshold_uncertainty_score":0.0067447424},"labels":[],"label_agreement":null},{"id":"W2123050643","doi":"10.1186/1868-7083-6-2","title":"Decitabine impact on the endocytosis regulator RhoA, the folate carriers RFC1 and FOLR1, and the glucose transporter GLUT4 in human tumors","year":2014,"lang":"en","type":"article","venue":"Clinical Epigenetics","topic":"Epigenetics and DNA Methylation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":10,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ottawa Hospital; University of Ottawa","funders":"National Cancer Institute; National Institutes of Health; University of Texas MD Anderson Cancer Center; American Association for Cancer Research; U.S. Department of Defense","keywords":"Regulator; Endocytosis; Decitabine; Glucose transporter; Transporter; Chemistry; Biology; Cancer research; Medicine; Biochemistry; Internal medicine; Cell biology; Gene; DNA methylation","score_opus":0.017368282674291437,"score_gpt":0.3149245572739691,"score_spread":0.2975562745996777,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2123050643","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9991937,0.0004911367,0.000054763193,0.00000944289,6.6484887e-7,0.0000038995076,0.00006895424,0.000003076148,0.0001742425],"genre_scores_gemma":[0.9993266,0.00016015203,0.00008630043,0.0000061066826,6.980182e-7,0.0000057592606,0.000121284145,0.0000015508202,0.00029151683],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999156,0.000017223381,0.000005921272,0.000024891857,0.000016715649,0.000019687135],"domain_scores_gemma":[0.99991095,0.000019888888,0.000033136974,0.000009704123,0.000009541838,0.000016834596],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000104259954,0.00013447026,0.00023308607,0.0002171072,0.0001790686,0.00024983968,0.000075849406,0.00018317033,0.0010714735],"category_scores_gemma":[0.0002043198,0.000111294125,0.0001206455,0.00019563756,0.00017608055,0.00009726435,0.00015121717,0.0001862652,0.00018287105],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0076156864,0.00024934832,0.32510915,0.00015256858,0.00018709786,0.00076368,0.00042839913,0.0008435302,0.6306938,0.00009499199,0.00017074651,0.033690926],"study_design_scores_gemma":[0.00006295566,0.0015050172,0.86106676,0.0000065742647,0.00011248368,0.0020489725,0.00022839016,0.00096215884,0.1324247,0.00006320567,0.0015097344,0.000009025626],"about_ca_topic_score_codex":0.0018495164,"about_ca_topic_score_gemma":0.002341843,"teacher_disagreement_score":0.0018495164,"about_ca_system_score_codex":0.0004876093,"about_ca_system_score_gemma":0.00013321573,"threshold_uncertainty_score":0.003677547},"labels":[],"label_agreement":null},{"id":"W2131875041","doi":"10.1186/1868-7083-4-23","title":"Putative molecular mechanism underlying sperm chromatin remodelling is regulated by reproductive hormones","year":2012,"lang":"en","type":"article","venue":"Clinical Epigenetics","topic":"Sperm and Testicular Function","field":"Medicine","cited_by":17,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Department of Science and Technology, Ministry of Science and Technology, India; University of South Carolina; Shizuoka University; McGill University","keywords":"Biology; Histone; Chromatin; Chromodomain; Cell biology; Chromatin remodeling; Endocrinology; Internal medicine; Genetics; Gene; Helicase; Medicine","score_opus":0.09498117584034547,"score_gpt":0.3764663299513272,"score_spread":0.28148515411098174,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2131875041","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98774815,0.005863168,0.0040062303,0.00012432382,0.000026733658,0.000035476918,0.00040729684,0.00009043768,0.0016981608],"genre_scores_gemma":[0.99523854,0.0015624354,0.0009591074,0.000029650124,0.000014658446,0.0000162179,0.00040650475,0.00000395134,0.0017689228],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999497,0.0000068212316,0.0000034541233,0.000015322734,0.000010371065,0.000014349531],"domain_scores_gemma":[0.99992275,0.000009185712,0.000033795648,0.0000059456747,0.00000861321,0.000019700497],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000097269905,0.0002684365,0.00012584901,0.00019003225,0.00012358345,0.0001726165,0.00022056304,0.0002253351,0.0015818735],"category_scores_gemma":[0.00006636423,0.00007885524,0.00018518495,0.000078621735,0.0003081926,0.00017381822,0.00011106861,0.0001489177,0.00017448244],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002133841,0.000018282379,0.0016062822,0.000055925135,0.000008319317,0.00011903896,0.000017225193,0.000046609122,0.9957877,0.0002954264,0.000031005788,0.0018007667],"study_design_scores_gemma":[0.00004038469,0.000952632,0.08940769,0.000020506523,0.00004813588,0.0009236722,0.00008050518,0.00083850574,0.9033919,0.00022492034,0.004062422,0.000008794976],"about_ca_topic_score_codex":0.00034787238,"about_ca_topic_score_gemma":0.00053452194,"teacher_disagreement_score":0.0015818735,"about_ca_system_score_codex":0.00024415017,"about_ca_system_score_gemma":0.0001531328,"threshold_uncertainty_score":0.005291879},"labels":[],"label_agreement":null},{"id":"W2138048828","doi":"10.1186/s13148-015-0065-5","title":"Phase I study of azacitidine and oxaliplatin in patients with advanced cancers that have relapsed or are refractory to any platinum therapy","year":2015,"lang":"en","type":"article","venue":"Clinical Epigenetics","topic":"Ferroptosis and cancer prognosis","field":"Medicine","cited_by":17,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ottawa Hospital; Ottawa Regional Cancer Foundation; University of Ottawa","funders":"University of Texas MD Anderson Cancer Center; National Institutes of Health; National Cancer Institute; Celgene","keywords":"Oxaliplatin; Azacitidine; Medicine; Internal medicine; Oncology; Cancer; DNA methylation; Gastroenterology; Pharmacology; Chemistry; Colorectal cancer; Biochemistry; Gene expression","score_opus":0.12584679428654522,"score_gpt":0.40247505425791796,"score_spread":0.27662825997137275,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2138048828","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99299556,0.0023785976,0.0004901268,0.00022480424,0.000083383835,0.0021712594,0.0005466071,0.00005957867,0.0010500747],"genre_scores_gemma":[0.9893763,0.0019234251,0.0017604674,0.00058134727,0.00013366078,0.0025146194,0.0019178531,0.000028068382,0.0017643298],"study_design_codex":"randomized_trial","study_design_gemma":"nonrandomized_trial","domain_scores_codex":[0.9995239,0.00019049783,0.000023325583,0.00010845362,0.00004800425,0.00010581607],"domain_scores_gemma":[0.9992556,0.000095432035,0.00012300292,0.00007662419,0.00004941458,0.0003998821],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001160071,0.0010434446,0.0034364606,0.00031535962,0.00045367065,0.0008320533,0.0008591269,0.0011651752,0.0031807276],"category_scores_gemma":[0.0007460248,0.0005887656,0.001503404,0.00050281506,0.0008389258,0.00061997183,0.00040091804,0.0030884526,0.0006405782],"study_design_candidate":"nonrandomized_trial","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.75409406,0.08335497,0.012230352,0.00085837627,0.0023092588,0.0003773335,0.00048547404,0.003194801,0.061826855,0.00021582881,0.0024304837,0.07862228],"study_design_scores_gemma":[0.29427063,0.67841643,0.018494157,0.000027095908,0.00061119307,0.00033748252,0.00006710601,0.0012385291,0.0038892373,0.00013008727,0.0024969326,0.000021178605],"about_ca_topic_score_codex":0.0014229896,"about_ca_topic_score_gemma":0.002704374,"teacher_disagreement_score":0.0034364606,"about_ca_system_score_codex":0.0009993436,"about_ca_system_score_gemma":0.0017070401,"threshold_uncertainty_score":0.010640621},"labels":[],"label_agreement":null},{"id":"W2141406068","doi":"10.1186/1868-7083-6-13","title":"Impact of decitabine on immunohistochemistry expression of the putative tumor suppressor genes FHIT, WWOX, FUS1 and PTEN in clinical tumor samples","year":2014,"lang":"en","type":"article","venue":"Clinical Epigenetics","topic":"Genetics and Neurodevelopmental Disorders","field":"Biochemistry, Genetics and Molecular Biology","cited_by":14,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Ottawa","funders":"National Cancer Institute; University of Texas MD Anderson Cancer Center; National Institutes of Health; U.S. Department of Defense","keywords":"WWOX; FHIT; PTEN; Decitabine; Tumor suppressor gene; Cancer research; Azacitidine; DNA methylation; Medicine; Methylation; Pathology; Biology; Internal medicine; Gene expression; Cancer; Suppressor; Gene; Genetics","score_opus":0.027265668210842465,"score_gpt":0.35437577969488954,"score_spread":0.32711011148404706,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2141406068","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9985448,0.000548793,0.00029673128,0.000017307382,0.000005054279,0.000017065839,0.000055293585,0.000006968329,0.0005080716],"genre_scores_gemma":[0.99894565,0.00016240608,0.0004816042,0.000009399956,0.0000023537461,0.000017351853,0.0001266058,0.0000027774322,0.00025191274],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9996482,0.000090791415,0.000036207406,0.00009073247,0.00007956758,0.0000544299],"domain_scores_gemma":[0.99970764,0.00010903756,0.00006046416,0.00002530203,0.000054475775,0.000043097785],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000622547,0.00019364308,0.00022201528,0.0003628498,0.00019391766,0.00026482448,0.00016909283,0.00017657047,0.00095675595],"category_scores_gemma":[0.000796807,0.00009166297,0.0001090324,0.0002485069,0.00022808829,0.0001095489,0.00016319419,0.00016748067,0.00012911628],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.008664903,0.00019303907,0.44393575,0.00020326252,0.00020037066,0.0015765888,0.0003086109,0.0004119406,0.50771147,0.000078439705,0.0001905359,0.0365251],"study_design_scores_gemma":[0.00007325001,0.0019917923,0.7914742,0.000016044798,0.00019479725,0.0048002196,0.00027057246,0.0013437612,0.19801782,0.000054561133,0.0017546713,0.000008323034],"about_ca_topic_score_codex":0.00096657884,"about_ca_topic_score_gemma":0.002768695,"teacher_disagreement_score":0.00096657884,"about_ca_system_score_codex":0.00040483254,"about_ca_system_score_gemma":0.00012644468,"threshold_uncertainty_score":0.0032923222},"labels":[],"label_agreement":null},{"id":"W2154618092","doi":"10.1186/1868-7083-4-5","title":"Roles of histone deacetylases in epigenetic regulation: emerging paradigms from studies with inhibitors","year":2012,"lang":"en","type":"article","venue":"Clinical Epigenetics","topic":"Histone Deacetylase Inhibitors Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":503,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba","funders":"Canadian Institutes of Health Research; Manitoba Health Research Council","keywords":"Histone deacetylase; Epigenetics; Biology; Histone; Chromatin remodeling; Reprogramming; HDAC1; Chromatin; Transcription factor; Acetylation; Vorinostat; Histone deacetylase 5; Transcriptional regulation; Computational biology; Cell biology; Genetics; Gene","score_opus":0.05871680359192849,"score_gpt":0.4262477099212495,"score_spread":0.367530906329321,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2154618092","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.006232923,0.973756,0.0071587274,0.0059938203,0.00052849797,0.00002866544,0.00008804704,0.000059881953,0.0061534666],"genre_scores_gemma":[0.043375976,0.9462125,0.003857017,0.0026644005,0.0012244635,0.00008823563,0.00012215038,0.000024255269,0.002431056],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9992787,0.00022341478,0.000047931917,0.0001484783,0.00018426774,0.00011727904],"domain_scores_gemma":[0.9989415,0.0005441677,0.00010901345,0.000090244066,0.00018665653,0.00012855562],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0029566162,0.00079131767,0.0014321799,0.0010787351,0.0004447605,0.0020173206,0.0010259936,0.0011688966,0.0021931557],"category_scores_gemma":[0.0014032298,0.00038668865,0.00079250394,0.0010707068,0.0023196053,0.0033793543,0.0013829193,0.003748605,0.0009298416],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0012928196,0.0008119909,0.0017911558,0.008348241,0.00032036475,0.0008192933,0.0007897889,0.0018640105,0.071674824,0.13151672,0.019643107,0.76112765],"study_design_scores_gemma":[0.00033549583,0.002798885,0.0037388825,0.0017249049,0.000284258,0.001871052,0.00057559425,0.0022421745,0.045506082,0.06411854,0.8766765,0.00012753645],"about_ca_topic_score_codex":0.00069179107,"about_ca_topic_score_gemma":0.0013236898,"teacher_disagreement_score":0.0029566162,"about_ca_system_score_codex":0.0013759925,"about_ca_system_score_gemma":0.0008513238,"threshold_uncertainty_score":0.015636265},"labels":[],"label_agreement":null},{"id":"W2156665587","doi":"10.1186/1868-7083-6-19","title":"Epigenetic therapy of acute myeloid leukemia using 5-aza-2'-deoxycytidine (decitabine) in combination with inhibitors of histone methylation and deacetylation","year":2014,"lang":"en","type":"article","venue":"Clinical Epigenetics","topic":"Acute Myeloid Leukemia Research","field":"Medicine","cited_by":75,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Centre Hospitalier Universitaire Sainte-Justine; Université de Montréal","funders":"Université de Montréal","keywords":"Trichostatin A; Decitabine; EZH2; Epigenetics; Epigenetic therapy; Cancer research; Biology; Gene silencing; Chromatin; DNA methylation; Acetylation; PRC2; Histone; Methylation; Histone deacetylase; Genetics; Gene; Gene expression","score_opus":0.05031231532236087,"score_gpt":0.3895590017751555,"score_spread":0.33924668645279465,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2156665587","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.95352894,0.031192472,0.0069176005,0.0004799832,0.00026226332,0.0002898061,0.00046130377,0.00032443157,0.0065432317],"genre_scores_gemma":[0.9884928,0.006003458,0.0030263786,0.00015933049,0.000042753283,0.00009554866,0.00036783688,0.000013856735,0.0017980315],"study_design_codex":"bench_or_experimental","study_design_gemma":"nonrandomized_trial","domain_scores_codex":[0.9999192,0.000015855076,0.00000932302,0.000017983999,0.000018810026,0.000018803728],"domain_scores_gemma":[0.9999672,0.000005514771,0.00001036145,0.0000045620627,0.00000453365,0.000007839842],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000112648726,0.0003112793,0.00037674667,0.00025572197,0.00013734691,0.00017277918,0.00024075258,0.00019740191,0.0010694879],"category_scores_gemma":[0.00010826935,0.000077022465,0.00018194993,0.00023327103,0.00012463209,0.0001068949,0.00023023676,0.00041947872,0.00024342495],"study_design_candidate":"nonrandomized_trial","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0013940318,0.0003344201,0.0007902543,0.0003185434,0.00007368034,0.00024330718,0.00005241987,0.00078833103,0.8984331,0.00043788084,0.00050911197,0.09662481],"study_design_scores_gemma":[0.0008132096,0.0061726905,0.012126885,0.000048080296,0.00025669188,0.0023493597,0.000037110196,0.0021805807,0.93923694,0.000221479,0.036543246,0.000013699734],"about_ca_topic_score_codex":0.0006163624,"about_ca_topic_score_gemma":0.0015377224,"teacher_disagreement_score":0.0010694879,"about_ca_system_score_codex":0.00032601625,"about_ca_system_score_gemma":0.00020016762,"threshold_uncertainty_score":0.0035777688},"labels":[],"label_agreement":null},{"id":"W2157266215","doi":"10.1186/1868-7083-6-12","title":"Epigenetic response in mice mastitis: Role of histone H3 acetylation and microRNA(s) in the regulation of host inflammatory gene expression during Staphylococcus aureus infection","year":2014,"lang":"en","type":"article","venue":"Clinical Epigenetics","topic":"Milk Quality and Mastitis in Dairy Cows","field":"Agricultural and Biological Sciences","cited_by":35,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Kootenay Association for Science & Technology","funders":"Jawaharlal Nehru Centre for Advanced Scientific Research; Indian Council of Agricultural Research","keywords":"Biology; Epigenetics; Staphylococcus aureus; Histone; Regulation of gene expression; Proinflammatory cytokine; Gene expression; Context (archaeology); Staphylococcal infections; Microbiology; Immunology; Gene; Inflammation; Genetics; Bacteria","score_opus":0.022267681410541577,"score_gpt":0.2937900937196821,"score_spread":0.27152241230914054,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2157266215","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9906273,0.003234338,0.0038032387,0.00017303227,0.00005344175,0.00004594883,0.0008412869,0.000111739435,0.0011095444],"genre_scores_gemma":[0.99244505,0.0011669345,0.003398678,0.00013193591,0.000015870866,0.00009460875,0.00061919616,0.000023102677,0.0021046116],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998159,0.000022805621,0.000016244023,0.00006323693,0.00003986234,0.000042118285],"domain_scores_gemma":[0.99988306,0.000010337473,0.000053168747,0.000011415792,0.000012144655,0.0000298261],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00019145341,0.00029292871,0.00026462963,0.00035672603,0.00013797909,0.00022499247,0.00013097121,0.00031227744,0.0011768703],"category_scores_gemma":[0.000107108455,0.00017729387,0.00036090557,0.00017400827,0.00027557716,0.00016123925,0.0001867724,0.0005642946,0.00021993787],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00021230664,0.00001654011,0.0004459183,0.000025210917,0.0000038105618,0.000038806764,0.000016168797,0.000015515458,0.9985683,0.000031838204,0.000014100807,0.00061143195],"study_design_scores_gemma":[0.000032892334,0.0008156364,0.06316732,0.00001930648,0.000046866924,0.0005623806,0.00010925544,0.00080336153,0.9327414,0.00015214135,0.0015371016,0.00001235412],"about_ca_topic_score_codex":0.00032079488,"about_ca_topic_score_gemma":0.0005444558,"teacher_disagreement_score":0.0011768703,"about_ca_system_score_codex":0.00022610794,"about_ca_system_score_gemma":0.00016161945,"threshold_uncertainty_score":0.003937006},"labels":[],"label_agreement":null},{"id":"W2159753430","doi":"10.1186/s13148-015-0118-9","title":"Dual EZH2 and EHMT2 histone methyltransferase inhibition increases biological efficacy in breast cancer cells","year":2015,"lang":"en","type":"article","venue":"Clinical Epigenetics","topic":"Epigenetics and DNA Methylation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":81,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Structural Genomics Consortium; University of Toronto","funders":"Ministero dello Sviluppo Economico; Cancer Research UK; Ontario Ministry of Economic Development and Innovation; Ontario Genomics Institute; Ontario Genomics; Genome Canada; Wellcome Trust; GlaxoSmithKline; European Commission; Pfizer; Ovarian Cancer Action; Engineering and Physical Sciences Research Council; Eli Lilly and Company","keywords":"Histone methyltransferase; Gene silencing; EZH2; Biology; Histone; Histone methylation; Chromatin; Chromatin immunoprecipitation; Gene knockdown; Methyltransferase; Cancer research; RNA interference; Gene expression; Methylation; Cell biology; DNA methylation; Gene; Biochemistry; Promoter; RNA","score_opus":0.06994144965050621,"score_gpt":0.3805285219737153,"score_spread":0.3105870723232091,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2159753430","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98484796,0.0056749606,0.0031162584,0.00022305475,0.00008221996,0.0000971812,0.0011772654,0.0003323611,0.004448734],"genre_scores_gemma":[0.9881505,0.0023540063,0.0028613769,0.00009062468,0.000016177728,0.00009729437,0.0016681701,0.000030760308,0.0047311815],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99983263,0.000020923517,0.000016472088,0.000030088831,0.00006767934,0.000032201428],"domain_scores_gemma":[0.9999212,0.000016282807,0.000014038959,0.000010740294,0.000016779566,0.000020875998],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001616062,0.0004531643,0.00051038805,0.00027518044,0.00014068885,0.00028902967,0.0002483513,0.00028991888,0.002323661],"category_scores_gemma":[0.00010706384,0.00011877551,0.00028262357,0.00027816565,0.00013997548,0.00014755229,0.00016764282,0.00069614605,0.0005324216],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00020160669,0.00011327762,0.00014964245,0.00007392749,0.000015465543,0.000022738708,0.000009854986,0.000069749796,0.99643743,0.000036110014,0.00013759319,0.0027326972],"study_design_scores_gemma":[0.00003312769,0.00074065063,0.0017875242,0.0000036330023,0.000031668565,0.000094937,0.000009086315,0.0002959814,0.9950045,0.0000118614735,0.0019842987,0.000002795014],"about_ca_topic_score_codex":0.0005653285,"about_ca_topic_score_gemma":0.0014583528,"teacher_disagreement_score":0.002323661,"about_ca_system_score_codex":0.0003237271,"about_ca_system_score_gemma":0.0002251193,"threshold_uncertainty_score":0.0077733994},"labels":[],"label_agreement":null},{"id":"W2162833751","doi":"10.1186/1868-7083-6-14","title":"Acetylsalicylic acid, aging and coronary artery disease are associated with ABCA1 DNA methylation in men","year":2014,"lang":"en","type":"article","venue":"Clinical Epigenetics","topic":"Cholesterol and Lipid Metabolism","field":"Medicine","cited_by":85,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval; Cégep de Chicoutimi; Institut universitaire de cardiologie et de pneumologie de Québec; Université de Sherbrooke","funders":"Canadian Institutes of Health Research; Université de Sherbrooke; Fonds de Recherche du Québec - Santé; Diabète Québec","keywords":"Coronary artery disease; DNA methylation; Medicine; Human genetics; Disease; Methylation; Internal medicine; Cardiology; Bioinformatics; DNA; Genetics; Biology; Gene","score_opus":0.03846457396152479,"score_gpt":0.32681125493152874,"score_spread":0.28834668097000393,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2162833751","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9985065,0.0009534849,0.0001230214,0.000022881082,0.000005839438,0.0000032937278,0.00013435986,0.000005637126,0.00024502294],"genre_scores_gemma":[0.99945813,0.00016544378,0.00008708711,0.000013689316,0.000008139243,0.0000024014994,0.00006691447,0.0000011358775,0.00019708657],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9998734,0.000030204974,0.000011075236,0.00004571924,0.000022257824,0.000017310093],"domain_scores_gemma":[0.9996891,0.00006490488,0.00013553732,0.000025058976,0.000029041212,0.000056404744],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00024277018,0.0001812815,0.00020666569,0.0003443028,0.00023139303,0.00022475065,0.000085498425,0.00020630499,0.0017731594],"category_scores_gemma":[0.0006938273,0.00014940597,0.00024809688,0.00039751388,0.00015651961,0.00011892613,0.00014353251,0.0001953237,0.00016700896],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00039313937,0.000023034809,0.992077,0.000019148412,0.00010641045,0.00013131405,0.00011589894,0.000027933163,0.0034099976,0.00002218477,0.00005974923,0.0036141826],"study_design_scores_gemma":[0.0000032727075,0.000088077184,0.9991092,0.0000020134282,0.00004104764,0.00027629413,0.000030858053,0.00005234495,0.00023170971,0.000020489604,0.0001430613,0.0000015421833],"about_ca_topic_score_codex":0.0015551168,"about_ca_topic_score_gemma":0.0014701225,"teacher_disagreement_score":0.0017731594,"about_ca_system_score_codex":0.00008776171,"about_ca_system_score_gemma":0.00010284339,"threshold_uncertainty_score":0.0059317946},"labels":[],"label_agreement":null},{"id":"W2165918808","doi":"10.1186/1868-7083-4-10","title":"LINE-1 methylation in visceral adipose tissue of severely obese individuals is associated with metabolic syndrome status and related phenotypes","year":2012,"lang":"en","type":"article","venue":"Clinical Epigenetics","topic":"Epigenetics and DNA Methylation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":78,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University and Génome Québec Innovation Centre; Institut universitaire de cardiologie et de pneumologie de Québec; Université Laval; Ministère de l'Agriculture, des Pêcheries et de l'Alimentation","funders":"Institut universitaire de cardiologie et de pneumologie de Québec, Université Laval; Canada Research Chairs; Canadian Institutes of Health Research; Université Laval","keywords":"Metabolic syndrome; Internal medicine; Medicine; Endocrinology; Quartile; Meth-; Adipose tissue; Obesity; Blood pressure; DNA methylation; Waist; Odds ratio; Physiology; Biology; Confidence interval; Genetics; Chemistry","score_opus":0.02711592490107131,"score_gpt":0.3297061407320625,"score_spread":0.3025902158309912,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2165918808","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99950504,0.0001426151,0.000121876314,0.000013262336,0.0000013575749,0.000001933098,0.00011119773,0.0000032023677,0.00009964136],"genre_scores_gemma":[0.9995455,0.000043544682,0.0001340598,0.000009695481,0.0000022435377,0.0000027489107,0.00013845626,0.0000015254229,0.00012207459],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9999243,0.000017756172,0.0000074824707,0.000029201141,0.000011956818,0.000009354952],"domain_scores_gemma":[0.9996356,0.00006642523,0.00020371412,0.00002387448,0.000024141304,0.000046103694],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012422643,0.0001619576,0.00016413505,0.0003273077,0.00013310119,0.00021676095,0.000119807235,0.00020869318,0.0014804623],"category_scores_gemma":[0.00054368546,0.000124913,0.00012985736,0.0003029584,0.00014081245,0.00008229311,0.00017782566,0.00024337553,0.00012991247],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00074807723,0.000025584433,0.9762818,0.000023114711,0.00008498195,0.00011242024,0.00009634391,0.0000812536,0.01920887,0.000022514709,0.000058054324,0.0032569114],"study_design_scores_gemma":[0.0000036597994,0.000075803626,0.99881196,0.0000026702323,0.000019422734,0.00030484982,0.00004285418,0.000116046875,0.00054581295,0.000020941403,0.000054196942,0.0000018491239],"about_ca_topic_score_codex":0.0007544603,"about_ca_topic_score_gemma":0.001185018,"teacher_disagreement_score":0.0014804623,"about_ca_system_score_codex":0.00007319905,"about_ca_system_score_gemma":0.000048126778,"threshold_uncertainty_score":0.0049526095},"labels":[],"label_agreement":null},{"id":"W2170711824","doi":"10.1186/1868-7083-5-3","title":"Pharmacokinetic and pharmacodynamic analysis of 5-aza-2’-deoxycytidine (decitabine) in the design of its dose-schedule for cancer therapy","year":2013,"lang":"en","type":"article","venue":"Clinical Epigenetics","topic":"Epigenetics and DNA Methylation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":209,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Centre Hospitalier Universitaire Sainte-Justine; Université de Montréal","funders":"","keywords":"Decitabine; Deoxycytidine; Azacitidine; Medicine; Cytidine deaminase; Myeloid leukemia; Pharmacology; Cancer; Cancer research; Pharmacodynamics; Cytarabine; Hypomethylating agent; Pharmacokinetics; DNA methylation; Oncology; Internal medicine; Gemcitabine; Biology; Immunology; Genetics","score_opus":0.09477849107436917,"score_gpt":0.41659558501409166,"score_spread":0.32181709393972247,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2170711824","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8992398,0.037751663,0.051188912,0.00068309135,0.00021270927,0.0005811797,0.0015727328,0.0003264696,0.008443459],"genre_scores_gemma":[0.98176724,0.0059048915,0.008759642,0.00019918862,0.00004885542,0.00020560212,0.0006348919,0.000083571846,0.002396136],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99976295,0.000084167266,0.000010088805,0.000047303427,0.00006817835,0.000027319746],"domain_scores_gemma":[0.99982136,0.000066488596,0.00004576646,0.000013237112,0.000027463764,0.000025718458],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00041054262,0.00028785295,0.00046940497,0.00020837029,0.000102631384,0.0004948876,0.00022433678,0.00029869625,0.0008222919],"category_scores_gemma":[0.0007478762,0.00021377011,0.00027132063,0.0002954381,0.0001403758,0.00019921408,0.00010639792,0.0006727659,0.00035009868],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0056372397,0.0004728155,0.0051301494,0.00041524318,0.00018076992,0.00018904205,0.000111276975,0.013813122,0.8809772,0.0010862835,0.0016342442,0.09035258],"study_design_scores_gemma":[0.0005667246,0.016070608,0.032799434,0.000063039515,0.00053605204,0.0020170058,0.00008803535,0.064737454,0.813314,0.0006484906,0.06906516,0.00009402091],"about_ca_topic_score_codex":0.0012010466,"about_ca_topic_score_gemma":0.001322193,"teacher_disagreement_score":0.0012010466,"about_ca_system_score_codex":0.0006468651,"about_ca_system_score_gemma":0.00048688686,"threshold_uncertainty_score":0.0046933293},"labels":[],"label_agreement":null},{"id":"W2173045156","doi":"10.1186/s13148-015-0143-8","title":"Imprinting disorders: a group of congenital disorders with overlapping patterns of molecular changes affecting imprinted loci","year":2015,"lang":"en","type":"review","venue":"Clinical Epigenetics","topic":"Genetic Syndromes and Imprinting","field":"Biochemistry, Genetics and Molecular Biology","cited_by":214,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Medical Research Council; Assistance publique-Hôpitaux de Paris; Bundesministerium für Bildung und Forschung; Seconda Università degli Studi di Napoli; Institute of Genetics; Institut National de la Santé et de la Recherche Médicale; European Cooperation in Science and Technology; Instituto de Salud Carlos III; National Institute for Health and Care Research","keywords":"Genomic imprinting; Epigenetics; Human genetics; Imprinting (psychology); Biology; Genetics; DNA methylation; Gene; Molecular genetics; Disease; Bioinformatics; Computational biology; Medicine; Gene expression; Internal medicine","score_opus":0.037804355574652976,"score_gpt":0.34524692443060395,"score_spread":0.307442568855951,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2173045156","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00024305037,0.99731714,0.00033434475,0.00034960423,0.00014969573,0.000005302358,0.000046757435,0.000018345556,0.0015356481],"genre_scores_gemma":[0.0017961594,0.99655175,0.00037498045,0.00018792012,0.00013831751,0.000007142244,0.00010062697,0.000003097177,0.0008400445],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99983144,0.000026317826,0.000027527054,0.00002993855,0.00006543997,0.00001928706],"domain_scores_gemma":[0.99970776,0.00013122147,0.000054323515,0.00001005183,0.00005433035,0.00004221466],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003927046,0.0007764113,0.0010753225,0.0031254054,0.00031899824,0.00084404816,0.0008485556,0.000847697,0.0037165303],"category_scores_gemma":[0.00073294603,0.00014993917,0.00035867302,0.0026533685,0.00065562915,0.00090459286,0.0008197192,0.0012486664,0.0020801786],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00004019804,0.000026908374,0.00059896236,0.007947797,0.00008422773,0.00091072236,0.000099073455,0.00023054388,0.0017192569,0.005016233,0.023934284,0.95939165],"study_design_scores_gemma":[0.000008498557,0.000025628153,0.001123829,0.0016138498,0.000090958354,0.007522971,0.000068936235,0.0000397448,0.00048869196,0.002267325,0.9867338,0.00001581913],"about_ca_topic_score_codex":0.0010570412,"about_ca_topic_score_gemma":0.0020246608,"teacher_disagreement_score":0.0037165303,"about_ca_system_score_codex":0.0006387828,"about_ca_system_score_gemma":0.0011588108,"threshold_uncertainty_score":0.012433052},"labels":[],"label_agreement":null},{"id":"W2263790045","doi":"10.1186/s13148-016-0182-9","title":"Identification of the epigenetic reader CBX2 as a potential drug target in advanced prostate cancer","year":2016,"lang":"en","type":"article","venue":"Clinical Epigenetics","topic":"Epigenetics and DNA Methylation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":78,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"BC Cancer Agency; University of British Columbia; Université Laval","funders":"Canadian Cancer Society Research Institute; Canadian Institutes of Health Research; BC Cancer Foundation; Terry Fox Research Institute; Michael Smith Health Research BC; Prostate Cancer Canada","keywords":"Prostate cancer; Epigenetics; Identification (biology); Cancer; Medicine; Human genetics; Drug; Drug discovery; Bioinformatics; Computational biology; Internal medicine; Biology; Oncology; Pharmacology; Genetics; Gene","score_opus":0.013410679410245667,"score_gpt":0.3341558411526209,"score_spread":0.3207451617423753,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2263790045","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9687815,0.019774392,0.005500711,0.0008724963,0.00006308394,0.00008065735,0.00060797494,0.00016937566,0.004149868],"genre_scores_gemma":[0.9914169,0.0028079452,0.0025785847,0.00012481237,0.000026237902,0.000023281591,0.00042934116,0.0000097098955,0.002583174],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999355,0.000009676591,0.0000032318223,0.000015294487,0.000023875584,0.000012429066],"domain_scores_gemma":[0.99993813,0.000010576482,0.000014972465,0.0000062060176,0.0000113489,0.000018680721],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002096305,0.0002893437,0.00030706488,0.00031072838,0.00014490976,0.0003933297,0.00025364125,0.0002274405,0.0022840481],"category_scores_gemma":[0.00012548354,0.000083206,0.00014787794,0.00022365464,0.00025322638,0.00017842265,0.00023142525,0.00044759308,0.00031552862],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00041123817,0.000067984685,0.0036216169,0.00015103574,0.000019819403,0.00024340497,0.000021465165,0.00055725407,0.97565234,0.0005720246,0.00035333572,0.018328557],"study_design_scores_gemma":[0.000073934665,0.00074447924,0.02195915,0.000024426403,0.000046425368,0.0011982947,0.00004036053,0.002442424,0.96096134,0.00035519962,0.012142874,0.000011184076],"about_ca_topic_score_codex":0.0005797332,"about_ca_topic_score_gemma":0.0013467405,"teacher_disagreement_score":0.0022840481,"about_ca_system_score_codex":0.0005589041,"about_ca_system_score_gemma":0.00033152505,"threshold_uncertainty_score":0.007640898},"labels":[],"label_agreement":null},{"id":"W2295081085","doi":"10.1186/s13148-016-0193-6","title":"Genome-wide analysis of DNA methylation and gene expression defines molecular characteristics of Crohn’s disease-associated fibrosis","year":2016,"lang":"en","type":"article","venue":"Clinical Epigenetics","topic":"Inflammatory Bowel Disease","field":"Biochemistry, Genetics and Molecular Biology","cited_by":64,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institute of Diabetes and Digestive and Kidney Diseases; Génome Québec; McGill University; National Cancer Institute; National Institutes of Health; Case Western Reserve University; Cleveland Clinic; Eli and Edythe Broad Foundation; Howard Hughes Medical Institute","keywords":"DNA methylation; Biology; Epigenetics; Transcriptome; Genetics; Epigenomics; CpG site; Gene; Cancer research; Gene expression","score_opus":0.01638572447660843,"score_gpt":0.2862379551458263,"score_spread":0.2698522306692179,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2295081085","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9959293,0.0008175973,0.0018146966,0.00004134049,0.000002765583,0.000009597135,0.0009783204,0.000017144692,0.00038928812],"genre_scores_gemma":[0.99764925,0.00021921244,0.0011499878,0.000030861138,0.0000041174985,0.000012320266,0.000793192,0.000005179253,0.00013582318],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9998404,0.000023889574,0.000011940978,0.00007059243,0.000029685614,0.00002352445],"domain_scores_gemma":[0.9997594,0.000063761516,0.000099564495,0.000016761658,0.00002844722,0.000032046628],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00022698124,0.00015693551,0.00024324606,0.00063186884,0.00012759007,0.00023122011,0.000113590504,0.0002336314,0.00079114543],"category_scores_gemma":[0.00037580062,0.0000903318,0.00017734003,0.00044569763,0.00015061135,0.00010341859,0.00021285143,0.00023231974,0.00010660733],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00080030307,0.0000399065,0.5088077,0.0001579905,0.00025764777,0.0001526961,0.00013727,0.00062212156,0.47177896,0.00012539157,0.0002219339,0.016898101],"study_design_scores_gemma":[0.000008829941,0.00011582849,0.98440003,0.000010056767,0.00009442868,0.0005468536,0.00007384876,0.0013150627,0.012566273,0.00019146125,0.00067128154,0.0000060858556],"about_ca_topic_score_codex":0.0005745334,"about_ca_topic_score_gemma":0.0013049844,"teacher_disagreement_score":0.00079114543,"about_ca_system_score_codex":0.00012259868,"about_ca_system_score_gemma":0.00009747911,"threshold_uncertainty_score":0.002646625},"labels":[],"label_agreement":null},{"id":"W2299160489","doi":"10.1186/s13148-016-0195-4","title":"Dynamic interplay between locus-specific DNA methylation and hydroxymethylation regulates distinct biological pathways in prostate carcinogenesis","year":2016,"lang":"en","type":"article","venue":"Clinical Epigenetics","topic":"Epigenetics and DNA Methylation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":29,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Mount Sinai Hospital; University Health Network; Lunenfeld-Tanenbaum Research Institute; University of Toronto","funders":"University of Toronto","keywords":"DNA methylation; Biology; Carcinogenesis; Prostate cancer; Epigenetics; Epigenomics; Genetics; Cancer; Methylation; Regulation of gene expression; Gene; Cancer research; Computational biology; Gene expression","score_opus":0.041961846662744266,"score_gpt":0.334001208910665,"score_spread":0.2920393622479207,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2299160489","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97978914,0.0063616205,0.011186954,0.00016998767,0.00001303462,0.000036302114,0.00041798686,0.000118741395,0.0019062335],"genre_scores_gemma":[0.9953147,0.0014190713,0.002137417,0.00003795468,0.00000877931,0.0000133825615,0.00027140474,0.000010666232,0.0007865132],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9998832,0.000020244115,0.000006173995,0.00003916356,0.00003066496,0.000020566798],"domain_scores_gemma":[0.99985397,0.00003118268,0.00005651534,0.000015491849,0.000021171476,0.000021588161],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00023215453,0.00015245214,0.00014520244,0.0002789938,0.00014805952,0.00032882244,0.00021430214,0.0001644689,0.0010657909],"category_scores_gemma":[0.00022273617,0.00011556837,0.00015194491,0.00027249215,0.00029233392,0.00019382688,0.0002717859,0.00030380182,0.00017484366],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00024857704,0.000024540645,0.022000307,0.00012578003,0.00004068006,0.00014049116,0.00008719743,0.00046492546,0.9621284,0.0006949387,0.00006962701,0.013974494],"study_design_scores_gemma":[0.000024598648,0.00044620142,0.34862477,0.000030260751,0.00012658018,0.001674435,0.00017029783,0.004455742,0.6353694,0.0019441362,0.0071096737,0.000023956929],"about_ca_topic_score_codex":0.0005391159,"about_ca_topic_score_gemma":0.001087763,"teacher_disagreement_score":0.0010657909,"about_ca_system_score_codex":0.00033228353,"about_ca_system_score_gemma":0.0003560664,"threshold_uncertainty_score":0.0035654306},"labels":[],"label_agreement":null},{"id":"W2346557592","doi":"10.1186/s13148-016-0215-4","title":"Kaiso mediates human ICR1 methylation maintenance and H19 transcriptional fine regulation","year":2016,"lang":"en","type":"article","venue":"Clinical Epigenetics","topic":"Genetic Syndromes and Imprinting","field":"Biochemistry, Genetics and Molecular Biology","cited_by":29,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University Health Centre","funders":"Studienstiftung des Deutschen Volkes; Bundesministerium für Bildung und Forschung","keywords":"CTCF; Genomic imprinting; DNA methylation; Biology; Transcription factor; Epigenetics; Imprinting (psychology); Chromatin; CRISPR; Methylation; Genetics; Chromatin immunoprecipitation; Enhancer; Promoter; Gene; Gene expression","score_opus":0.03547001202568329,"score_gpt":0.3256148072426463,"score_spread":0.290144795216963,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2346557592","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.984124,0.003367901,0.0057209586,0.00017103065,0.00004007566,0.000036995203,0.00067692494,0.00032977492,0.0055322954],"genre_scores_gemma":[0.99347174,0.0005202852,0.0013213982,0.00004238872,0.000012073587,0.000016960543,0.0008672488,0.000038280486,0.0037096334],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998369,0.000011269219,0.0000060028833,0.0000604544,0.000037921738,0.000047508114],"domain_scores_gemma":[0.99985945,0.000017730179,0.00004994562,0.000018239552,0.000013391614,0.00004125328],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00011742392,0.00048470584,0.00018069457,0.00027340453,0.00025730042,0.0003475318,0.0005372508,0.0002967547,0.0042651733],"category_scores_gemma":[0.00021076707,0.00020406183,0.00030016186,0.00010898708,0.0003030202,0.00018363287,0.0003880439,0.00042170752,0.0019644352],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010712379,0.0000107799,0.0003694663,0.000040635765,0.0000059168374,0.00005763732,0.000014381707,0.000034426794,0.99813724,0.00010049558,0.00007280344,0.0010490222],"study_design_scores_gemma":[0.000021771295,0.00011316552,0.019459575,0.000008992119,0.000019621793,0.0006102279,0.000045595552,0.00076088746,0.97393143,0.000095536605,0.0049245213,0.000008636797],"about_ca_topic_score_codex":0.00095971854,"about_ca_topic_score_gemma":0.0013312667,"teacher_disagreement_score":0.0042651733,"about_ca_system_score_codex":0.00047074404,"about_ca_system_score_gemma":0.0002162288,"threshold_uncertainty_score":0.014268398},"labels":[],"label_agreement":null},{"id":"W2351397887","doi":"10.1186/s13148-016-0219-0","title":"DNA methylation mediates the effect of exposure to prenatal maternal stress on cytokine production in children at age 13½ years: Project Ice Storm","year":2016,"lang":"en","type":"article","venue":"Clinical Epigenetics","topic":"Reproductive System and Pregnancy","field":"Immunology and Microbiology","cited_by":73,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Douglas College; McGill University; Douglas Mental Health University Institute","funders":"Canadian Institutes of Health Research","keywords":"DNA methylation; Cytokine; Immunology; Methylation; Biology; Cytokine storm; Epigenetics; Mediation; In utero; Immune system; Genetics; Medicine; Gene; Internal medicine; Gene expression; Pregnancy; Fetus; Disease","score_opus":0.020285465915301754,"score_gpt":0.307870905188718,"score_spread":0.2875854392734163,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2351397887","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9995148,0.00008311847,0.00007898792,0.000024519353,0.0000010082774,0.000002997224,0.00011298948,0.0000011996464,0.00018037183],"genre_scores_gemma":[0.9993862,0.000071861185,0.00009257753,0.000013394559,0.0000012720116,0.000005391434,0.000097082804,0.0000010120723,0.00033121655],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99982685,0.000037780144,0.0000047283693,0.0000428382,0.00003317254,0.000054659162],"domain_scores_gemma":[0.9995596,0.00009045367,0.00017058202,0.000021542282,0.000059084115,0.00009863429],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00037393463,0.00017196314,0.00015592556,0.00018185454,0.00024922562,0.00022980648,0.0002008599,0.00017443686,0.0018356974],"category_scores_gemma":[0.00067346904,0.0000975976,0.00014120869,0.00017201103,0.0002945123,0.00007479129,0.00019876612,0.00026431167,0.000092876486],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0009523435,0.00005829834,0.9639257,0.000028023942,0.000078111036,0.00013491705,0.00038599697,0.00012232688,0.029939918,0.00005156968,0.00009686298,0.004225926],"study_design_scores_gemma":[0.0000017836959,0.00008694233,0.99815077,0.0000025686934,0.000010457271,0.000043427764,0.0000959211,0.00007322263,0.0014225435,0.000011201075,0.0000999406,0.0000011688329],"about_ca_topic_score_codex":0.06809774,"about_ca_topic_score_gemma":0.110741645,"teacher_disagreement_score":0.06809774,"about_ca_system_score_codex":0.00075812504,"about_ca_system_score_gemma":0.00097465597,"threshold_uncertainty_score":0.13540274},"labels":[],"label_agreement":null},{"id":"W2384087620","doi":"10.1186/s13148-016-0220-7","title":"RRx-001, an epigenetic-based radio- and chemosensitizer, has vascular normalizing effects on SCCVII and U87 tumors","year":2016,"lang":"en","type":"article","venue":"Clinical Epigenetics","topic":"Cancer, Hypoxia, and Metabolism","field":"Biochemistry, Genetics and Molecular Biology","cited_by":23,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia Hospital","funders":"","keywords":"Chemosensitizer; Epigenetics; Medicine; Cancer research; Internal medicine; Oncology; Psychology; Biology; Genetics; Cytotoxicity; Gene","score_opus":0.02581703472740527,"score_gpt":0.2970578011829527,"score_spread":0.27124076645554746,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2384087620","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9957438,0.0012758384,0.0016118968,0.000036618298,0.0000097369575,0.000030015062,0.00018655029,0.000072116534,0.0010334277],"genre_scores_gemma":[0.99540824,0.0009299506,0.0017973179,0.00002356425,0.000005018233,0.00003531154,0.00034003254,0.000014738496,0.0014458378],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999279,0.000010032579,0.0000052644136,0.000015414766,0.000024892874,0.000016556094],"domain_scores_gemma":[0.9999341,0.000013138588,0.000022799186,0.00000829594,0.000009538947,0.000012210847],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012577463,0.00024806306,0.00016100788,0.00016800576,0.0000814233,0.00012001315,0.0001309174,0.00015126549,0.0008214046],"category_scores_gemma":[0.00007617654,0.00008271307,0.00019042622,0.00009867649,0.00016587865,0.000093381066,0.0000761947,0.00030616162,0.00012758898],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006341745,0.00002554199,0.0001697801,0.00002661911,0.0000037277302,0.00001179525,0.000008630033,0.00008583237,0.99800986,0.000021936894,0.000021326401,0.0015515585],"study_design_scores_gemma":[0.0000064483615,0.00062320783,0.003970136,0.0000017195326,0.000013364642,0.000073128795,0.000008347538,0.000280101,0.9943593,0.000005429516,0.00065745186,0.0000013508975],"about_ca_topic_score_codex":0.0012123262,"about_ca_topic_score_gemma":0.0018201908,"teacher_disagreement_score":0.0012123262,"about_ca_system_score_codex":0.00023316276,"about_ca_system_score_gemma":0.00016070173,"threshold_uncertainty_score":0.0027478933},"labels":[],"label_agreement":null},{"id":"W2406639702","doi":"10.1186/s13148-016-0214-5","title":"MeCP2 and the enigmatic organization of brain chromatin. Implications for depression and cocaine addiction","year":2016,"lang":"en","type":"review","venue":"Clinical Epigenetics","topic":"Genetics and Neurodevelopmental Disorders","field":"Biochemistry, Genetics and Molecular Biology","cited_by":46,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Victoria","funders":"Canadian Institutes of Health Research","keywords":"MECP2; Rett syndrome; Epigenetics; Histone; Chromatin; DNA methylation; Biology; Neuroscience; Addiction; Genetics; DNA; Gene; Phenotype","score_opus":0.032816430547068745,"score_gpt":0.36403423575953786,"score_spread":0.33121780521246913,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2406639702","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000066460634,0.99884355,0.0000692826,0.000432852,0.000121918725,0.0000012103457,0.000009048456,0.0000034043603,0.0004522119],"genre_scores_gemma":[0.0006986433,0.9981489,0.00011471509,0.00021823475,0.00021098892,0.000002508807,0.000019772911,0.0000012090056,0.0005850207],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99987614,0.00002242991,0.000018826446,0.000026997872,0.00004157995,0.000013984955],"domain_scores_gemma":[0.99974066,0.00010937527,0.00004333777,0.000009349311,0.000059466987,0.000037756607],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005483441,0.00062450866,0.00087814446,0.0017438981,0.0002799373,0.00083478674,0.0007520639,0.0012674442,0.0030964187],"category_scores_gemma":[0.00070204894,0.00024302654,0.0003214819,0.001440755,0.000731335,0.0013597407,0.0008264627,0.0014843902,0.0016652745],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007686902,0.0000323775,0.00039382413,0.00925414,0.00006839273,0.0005139149,0.000109461915,0.00028806058,0.0017712894,0.006408542,0.0316925,0.94939065],"study_design_scores_gemma":[0.000010217298,0.000048097158,0.0012730194,0.0025502502,0.000059556096,0.0032014924,0.00008054628,0.00006569258,0.00030551094,0.0037479512,0.98864007,0.000017605487],"about_ca_topic_score_codex":0.0015515138,"about_ca_topic_score_gemma":0.0027492964,"teacher_disagreement_score":0.0030964187,"about_ca_system_score_codex":0.00074546784,"about_ca_system_score_gemma":0.001070774,"threshold_uncertainty_score":0.010358572},"labels":[],"label_agreement":null},{"id":"W2463358284","doi":"10.1186/s13148-016-0239-9","title":"PPARGC1α gene DNA methylation variations in human placenta mediate the link between maternal hyperglycemia and leptin levels in newborns","year":2016,"lang":"en","type":"article","venue":"Clinical Epigenetics","topic":"Gestational Diabetes Research and Management","field":"Medicine","cited_by":104,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Cégep de Chicoutimi; Centre Intégré Universitaire de Santé et de Services Sociaux du Saguenay–Lac-Saint-Jean; Université de Montréal; Université de Sherbrooke","funders":"Canadian Institutes of Health Research; Université de Sherbrooke; Fonds de Recherche du Québec - Santé; Diabète Québec","keywords":"DNA methylation; Gestational diabetes; Pregnancy; Endocrinology; Internal medicine; Placenta; Leptin; Biology; Cord blood; Epigenetics; PRDM16; Obesity; Medicine; Fetus; Gene; Gestation; Genetics; Brown adipose tissue; Gene expression","score_opus":0.09897680475774649,"score_gpt":0.4033279852320775,"score_spread":0.304351180474331,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2463358284","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9981523,0.0008655237,0.00045310965,0.000034149496,0.0000019395186,0.0000037548311,0.0002105412,0.0000074251775,0.0002713313],"genre_scores_gemma":[0.99888605,0.00030623592,0.000374324,0.000015089322,0.0000014550498,0.000007502876,0.00014570897,0.0000038269627,0.0002598415],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9998658,0.000037150025,0.000008233927,0.00003894355,0.00003084207,0.000018982248],"domain_scores_gemma":[0.9997079,0.00007662854,0.00014797115,0.000022811013,0.00002595735,0.000018642464],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00028550377,0.000138379,0.00014143968,0.00031818848,0.00010894199,0.00020873616,0.0001618659,0.00016828714,0.0012660332],"category_scores_gemma":[0.000927525,0.00015663965,0.00013936512,0.00037061758,0.0001450473,0.00007448822,0.00017994632,0.00018838816,0.00012204814],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0008983721,0.000024352257,0.888661,0.00008112984,0.00018840871,0.0003098869,0.00046228836,0.00022789868,0.095633104,0.000117613075,0.00011453161,0.013281448],"study_design_scores_gemma":[0.000006148067,0.000078647536,0.99048376,0.00001243648,0.000068393405,0.0005468773,0.00009372989,0.00028352335,0.007979933,0.00010404291,0.00033970762,0.0000027398485],"about_ca_topic_score_codex":0.003824558,"about_ca_topic_score_gemma":0.002583654,"teacher_disagreement_score":0.003824558,"about_ca_system_score_codex":0.00023442354,"about_ca_system_score_gemma":0.00020418444,"threshold_uncertainty_score":0.007604599},"labels":[],"label_agreement":null},{"id":"W2472944858","doi":"10.1186/s13148-016-0238-x","title":"Genome-wide placental DNA methylation analysis of severely growth-discordant monochorionic twins reveals novel epigenetic targets for intrauterine growth restriction","year":2016,"lang":"en","type":"article","venue":"Clinical Epigenetics","topic":"Pregnancy and preeclampsia studies","field":"Medicine","cited_by":101,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Mount Sinai Hospital; Hospital for Sick Children","funders":"Canadian Institutes of Health Research; Ontario Genomics; Genome Canada","keywords":"Epigenetics; DNA methylation; Intrauterine growth restriction; Biology; Genetics; Methylation; Monozygotic twin; Placenta; Bioinformatics; Gene; Pregnancy; Fetus; Gene expression","score_opus":0.057742126514789084,"score_gpt":0.34159053052450167,"score_spread":0.28384840400971256,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2472944858","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9988269,0.00015164663,0.00051792734,0.0000149726375,0.0000034337206,0.0000060229145,0.00022005886,0.0000046458595,0.00025428188],"genre_scores_gemma":[0.99890566,0.00006288421,0.0005541581,0.00001566321,0.0000013895673,0.000007429322,0.00025307486,0.0000053268272,0.00019438427],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99976045,0.000030124844,0.00002149116,0.00009070061,0.00006527315,0.000031956693],"domain_scores_gemma":[0.99976784,0.00004184394,0.0000747108,0.000035566518,0.00003366002,0.00004647866],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001981194,0.00020523476,0.00030417278,0.0006458674,0.00025657236,0.0002245662,0.00018955431,0.0002390581,0.0010287777],"category_scores_gemma":[0.00073056284,0.0001660703,0.000273312,0.00028967767,0.00021209699,0.000057139674,0.00036538186,0.0002240354,0.00009631618],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0013886846,0.00003880718,0.28379178,0.000068178386,0.00023210171,0.0016442935,0.0006698067,0.0002237008,0.70297146,0.00017499716,0.00016262106,0.0086335605],"study_design_scores_gemma":[0.000015012603,0.00017882405,0.9442313,0.000009592849,0.000113006,0.005984991,0.00023946745,0.0007647838,0.04771554,0.00013935215,0.0005995817,0.000008634441],"about_ca_topic_score_codex":0.0024198373,"about_ca_topic_score_gemma":0.0029147412,"teacher_disagreement_score":0.0024198373,"about_ca_system_score_codex":0.00017445216,"about_ca_system_score_gemma":0.00013182937,"threshold_uncertainty_score":0.0048114657},"labels":[],"label_agreement":null},{"id":"W2515141406","doi":"10.1186/s13148-016-0254-x","title":"Identification of a methylation profile for DNMT1-associated autosomal dominant cerebellar ataxia, deafness, and narcolepsy","year":2016,"lang":"en","type":"article","venue":"Clinical Epigenetics","topic":"Genetic Neurodegenerative Diseases","field":"Neuroscience","cited_by":79,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ottawa Hospital; London Health Sciences Centre; McMaster University; Western University; Children's Hospital of Eastern Ontario; Children’s Health Research Institute; University of Ottawa","funders":"Canadian Institutes of Health Research; Children's Hospital of Eastern Ontario Foundation; Ontario Genomics; Ontario Genomics Institute; Genome Canada","keywords":"DNA methylation; Genetics; Biology; DNA methyltransferase; Methylation; CpG site; Epigenetics; Epigenomics; Ataxia; Gene; Gene expression; Neuroscience","score_opus":0.06233779080184717,"score_gpt":0.3565178564107731,"score_spread":0.29418006560892596,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2515141406","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99837947,0.00028345134,0.00059756485,0.000018416942,0.000002118216,0.000010155836,0.00039975732,0.000023620933,0.00028543372],"genre_scores_gemma":[0.9985726,0.0000880167,0.0006585539,0.000018248227,0.0000024972392,0.000006957924,0.00042591107,0.000007994481,0.00021927369],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99989116,0.000010536884,0.000011749745,0.000043986747,0.000027845575,0.000014664508],"domain_scores_gemma":[0.99982196,0.000031954456,0.00005826894,0.000013205988,0.000039794515,0.000034819564],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014322749,0.00026123066,0.00016992279,0.0007435583,0.00020006933,0.00016436559,0.00012417987,0.00026073153,0.0013901772],"category_scores_gemma":[0.00045460358,0.00008011305,0.00012669765,0.00025126536,0.00013359416,0.00006284657,0.00014836181,0.0001850741,0.00023623671],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00044190537,0.000041766703,0.3187411,0.000074201365,0.00008691067,0.0016388787,0.00036630037,0.0002501872,0.6663356,0.00005479924,0.00023420005,0.011734195],"study_design_scores_gemma":[0.000014582515,0.00031274313,0.90533394,0.00001216882,0.00012518902,0.014240789,0.00016802188,0.0010182227,0.077411756,0.0000783132,0.0012729842,0.000011289943],"about_ca_topic_score_codex":0.002363334,"about_ca_topic_score_gemma":0.0030598638,"teacher_disagreement_score":0.002363334,"about_ca_system_score_codex":0.0002364812,"about_ca_system_score_gemma":0.00009336059,"threshold_uncertainty_score":0.004699111},"labels":[],"label_agreement":null},{"id":"W2516517589","doi":"10.1186/s13148-016-0253-y","title":"Next-generation sequencing reveals broad down-regulation of microRNAs in secondary progressive multiple sclerosis CD4+ T cells","year":2016,"lang":"en","type":"article","venue":"Clinical Epigenetics","topic":"Cytokine Signaling Pathways and Interactions","field":"Medicine","cited_by":61,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Diamantina Institute, University of Queensland; Trish Multiple Sclerosis Research Foundation; Canadian Institutes of Health Research; University of Queensland; Multiple Sclerosis Australia","keywords":"Human genetics; microRNA; Multiple sclerosis; Biology; Computational biology; Genetics; Medicine; Bioinformatics; Gene; Immunology","score_opus":0.2068559815960139,"score_gpt":0.34926874750737297,"score_spread":0.14241276591135907,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2516517589","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99229574,0.0010860283,0.003983697,0.0000676092,0.000027366337,0.000026717105,0.0013508559,0.000104368824,0.0010576342],"genre_scores_gemma":[0.98841363,0.00044892848,0.0072005815,0.00019461762,0.000021390297,0.00010464317,0.00199592,0.000045289256,0.0015750503],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9997452,0.000027449812,0.000022440214,0.00009756475,0.00007237299,0.00003504204],"domain_scores_gemma":[0.9998266,0.00004394986,0.00004517905,0.000017566847,0.00004630857,0.000020378344],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00026865056,0.00021735058,0.00027812694,0.00031801168,0.00018297622,0.00037682857,0.00011619989,0.0002976742,0.0014744372],"category_scores_gemma":[0.00044060333,0.00013400754,0.00030158376,0.00021713144,0.0001601819,0.000101430385,0.00018655899,0.00031881855,0.0004589186],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00037590886,0.000022356207,0.011546352,0.00009034815,0.000046150202,0.00008160765,0.0000757541,0.00015180648,0.97898006,0.000040009625,0.00022659259,0.008363176],"study_design_scores_gemma":[0.00006141865,0.0009854604,0.36904362,0.00004205038,0.00023489934,0.0015584591,0.00023969777,0.0038182111,0.616934,0.00033366558,0.006724722,0.000023905628],"about_ca_topic_score_codex":0.00036817841,"about_ca_topic_score_gemma":0.00080958195,"teacher_disagreement_score":0.0014744372,"about_ca_system_score_codex":0.00018581621,"about_ca_system_score_gemma":0.00015131352,"threshold_uncertainty_score":0.004932523},"labels":[],"label_agreement":null},{"id":"W2522351964","doi":"10.1186/s13148-016-0268-4","title":"The emerging role of lysine methyltransferase SETD8 in human diseases","year":2016,"lang":"en","type":"review","venue":"Clinical Epigenetics","topic":"Epigenetics and DNA Methylation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":105,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Ministero dell’Istruzione, dell’Università e della Ricerca; European Cooperation in Science and Technology; York University; School of Medicine, New York University; Università degli Studi di Salerno; Constellation Pharmaceuticals","keywords":"Methyltransferase; Histone H4; Histone methyltransferase; Proliferating cell nuclear antigen; Histone; Biology; Lysine; Epigenetics; Cell biology; DNA replication; Biochemistry; Cell growth; DNA; Methylation; Gene","score_opus":0.04422844623955558,"score_gpt":0.429736330433742,"score_spread":0.3855078841941864,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2522351964","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0003447561,0.9977457,0.00031986675,0.00037803664,0.00014254611,0.000003824133,0.000026038895,0.000011823874,0.0010273969],"genre_scores_gemma":[0.0023961847,0.9960263,0.00041753968,0.00019849208,0.00015893426,0.0000067746173,0.000050548257,0.000002464203,0.0007428735],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99989915,0.000017209752,0.00001745361,0.000020259022,0.000033663582,0.000012382851],"domain_scores_gemma":[0.99985945,0.00005970865,0.000021106656,0.0000051231787,0.0000356821,0.000018987452],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00037632385,0.0004770174,0.0007310724,0.0012686362,0.00019653219,0.0005594675,0.0004926494,0.0007577376,0.002952005],"category_scores_gemma":[0.00037787703,0.00014194039,0.0003228598,0.0010035732,0.0003589809,0.00072816416,0.0007058255,0.0010939008,0.0013560576],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008281831,0.000032582968,0.00038535456,0.009196218,0.00007156794,0.0004253797,0.000059890397,0.0002619685,0.0055054734,0.0040234523,0.012844338,0.96711105],"study_design_scores_gemma":[0.000016938622,0.00009826728,0.0013166298,0.0011550096,0.00009598305,0.0032086095,0.000047668735,0.00009348442,0.0022130033,0.0022432667,0.9894928,0.000018491328],"about_ca_topic_score_codex":0.000488871,"about_ca_topic_score_gemma":0.0008706694,"teacher_disagreement_score":0.002952005,"about_ca_system_score_codex":0.0004205586,"about_ca_system_score_gemma":0.00067818235,"threshold_uncertainty_score":0.009875476},"labels":[],"label_agreement":null},{"id":"W2578501783","doi":"10.1186/s13148-017-0310-1","title":"Combining omics data to identify genes associated with allergic rhinitis","year":2017,"lang":"en","type":"article","venue":"Clinical Epigenetics","topic":"Asthma and respiratory diseases","field":"Medicine","cited_by":17,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval; Institut universitaire de cardiologie et de pneumologie de Québec; McGill University and Génome Québec Innovation Centre; Université du Québec à Chicoutimi","funders":"Fonds de Recherche du Québec - Santé; Canadian Institutes of Health Research","keywords":"Single-nucleotide polymorphism; Genome-wide association study; Gene; Genetics; Quantitative trait locus; Biology; SNP; Epigenome; Genetic association; Atopic dermatitis; DNA methylation; Genotype; Immunology; Gene expression","score_opus":0.20299217012155915,"score_gpt":0.452506625503463,"score_spread":0.24951445538190384,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2578501783","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8865872,0.012454103,0.049685113,0.0027885651,0.00023861381,0.00026759206,0.04267321,0.00051903666,0.0047865384],"genre_scores_gemma":[0.9094481,0.0034884838,0.058340475,0.00092393707,0.00019425123,0.00027862698,0.026412655,0.00009040036,0.00082307134],"study_design_codex":"observational","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99835205,0.0005499116,0.00021981793,0.00041912938,0.00031310704,0.00014599207],"domain_scores_gemma":[0.9976725,0.0011322392,0.00042330302,0.0003539475,0.0002610958,0.00015698971],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0020164743,0.0008924847,0.001727573,0.005516254,0.00049264374,0.002002022,0.0003556457,0.0005103489,0.0019528591],"category_scores_gemma":[0.0038057396,0.0002518991,0.0016861038,0.00577734,0.00028940442,0.0006572072,0.0014487134,0.00071522425,0.00038999796],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0017189913,0.0002419532,0.7083545,0.002110717,0.0068748314,0.0013777423,0.0005215984,0.00867572,0.15369233,0.001823532,0.00278919,0.11181887],"study_design_scores_gemma":[0.00013410395,0.00045201718,0.9202269,0.0003092524,0.0036873661,0.0016523887,0.0010307186,0.021107646,0.019702667,0.014007908,0.017575683,0.00011338612],"about_ca_topic_score_codex":0.0017902546,"about_ca_topic_score_gemma":0.00270113,"teacher_disagreement_score":0.005516254,"about_ca_system_score_codex":0.0004488692,"about_ca_system_score_gemma":0.0007256012,"threshold_uncertainty_score":0.010664225},"labels":[],"label_agreement":null},{"id":"W2584723532","doi":"10.1186/s13148-017-0320-z","title":"An empirically driven data reduction method on the human 450K methylation array to remove tissue specific non-variable CpGs","year":2017,"lang":"en","type":"review","venue":"Clinical Epigenetics","topic":"Epigenetics and DNA Methylation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":65,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"BC Children's Hospital; University of British Columbia","funders":"Canadian Institutes of Health Research; R. Howard Webster Foundation; Fondation Brain Canada","keywords":"DNA methylation; Epigenetics; Epigenome; Population; Biology; Computational biology; Human genetics; Context (archaeology); Methylation; Genetics; Bioinformatics; Medicine; Gene; Gene expression","score_opus":0.3588563041744419,"score_gpt":0.5480611774189741,"score_spread":0.18920487324453217,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2584723532","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.018836096,0.00042045518,0.9742433,0.00046333313,0.00013552418,0.0006480844,0.0015263929,0.003253674,0.00047316888],"genre_scores_gemma":[0.052562296,0.00011170039,0.9407814,0.00029113138,0.00008033203,0.0015248697,0.003297655,0.00043098524,0.0009195539],"study_design_codex":"design_other","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9921462,0.004040163,0.000701445,0.0016602513,0.0012368311,0.00021514927],"domain_scores_gemma":[0.9880655,0.0067528123,0.0006003997,0.0026173212,0.0018047438,0.00015927712],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.012934711,0.001326249,0.0016646016,0.0021440133,0.001173299,0.0015819202,0.002321766,0.0014811187,0.0045711384],"category_scores_gemma":[0.03707511,0.0007864614,0.004727586,0.0026896656,0.0009488703,0.0006325162,0.0018223729,0.0028387818,0.002201799],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0012400551,0.0005715146,0.046850536,0.0014977346,0.0039837905,0.0006281249,0.001123204,0.06829468,0.05583237,0.014775301,0.023981374,0.7812213],"study_design_scores_gemma":[0.00072328234,0.0007321729,0.05085178,0.00024485038,0.0014389333,0.0008031877,0.0004281634,0.81821114,0.040442694,0.03550159,0.050350722,0.00027152838],"about_ca_topic_score_codex":0.0055627115,"about_ca_topic_score_gemma":0.009857919,"teacher_disagreement_score":0.012934711,"about_ca_system_score_codex":0.0007876205,"about_ca_system_score_gemma":0.0038761143,"threshold_uncertainty_score":0.068406105},"labels":[],"label_agreement":null},{"id":"W2594857580","doi":"10.1186/s13148-017-0326-6","title":"The dynamic DNA methylation landscape of the mutL homolog 1 shore is altered by MLH1-93G&gt;A polymorphism in normal tissues and colorectal cancer","year":2017,"lang":"en","type":"article","venue":"Clinical Epigenetics","topic":"Genetic factors in colorectal cancer","field":"Medicine","cited_by":22,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Public Health Ontario; Cancer Care Ontario; University of Toronto; University Health Network; Ontario Institute for Cancer Research; Lunenfeld-Tanenbaum Research Institute; Sinai Health System","funders":"National Cancer Institute; Canadian Institutes of Health Research; University of Toronto","keywords":"MLH1; DNA methylation; Biology; CpG site; Methylation; Cancer research; Colorectal cancer; Cancer epigenetics; Epigenetics; Genotype; Single-nucleotide polymorphism; Population; Cancer; Genetics; DNA mismatch repair; DNA; Medicine; Gene; Gene expression","score_opus":0.029977468760776133,"score_gpt":0.3683915324464244,"score_spread":0.3384140636856483,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2594857580","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99934417,0.00022344774,0.000050398754,0.00001475014,9.619464e-7,0.0000022935258,0.00020052413,0.0000034013467,0.00016009636],"genre_scores_gemma":[0.99965405,0.000051963143,0.00003426251,0.0000075849057,0.0000012566779,0.000002104092,0.00012463493,0.0000015585413,0.00012258778],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99984825,0.000019592087,0.000008469799,0.000048474147,0.000048562757,0.000026678013],"domain_scores_gemma":[0.9997918,0.00003598642,0.000095846815,0.000014865168,0.000026162334,0.00003535077],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000090750545,0.000105249266,0.00017185496,0.00040554363,0.00019799023,0.00019410411,0.00014611927,0.00015086994,0.001142042],"category_scores_gemma":[0.00044627837,0.00013812837,0.00008139318,0.00043521487,0.0002315144,0.000048783848,0.00013874908,0.00012880811,0.000120475466],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0014410645,0.000023629173,0.84891087,0.000058032245,0.00014059448,0.000344127,0.00049723196,0.00010752504,0.14268722,0.000030205229,0.00019996765,0.0055596074],"study_design_scores_gemma":[0.000004607375,0.000023274046,0.9986059,0.0000010792404,0.000012480982,0.00017806112,0.000030181533,0.000058057485,0.0009647693,0.000008825865,0.00011165566,0.0000010415782],"about_ca_topic_score_codex":0.026741985,"about_ca_topic_score_gemma":0.043200772,"teacher_disagreement_score":0.026741985,"about_ca_system_score_codex":0.0004473378,"about_ca_system_score_gemma":0.0002128295,"threshold_uncertainty_score":0.053172648},"labels":[],"label_agreement":null},{"id":"W2605695321","doi":"10.1186/s13148-017-0339-1","title":"Cord blood hematopoietic cells from preterm infants display altered DNA methylation patterns","year":2017,"lang":"en","type":"article","venue":"Clinical Epigenetics","topic":"Epigenetics and DNA Methylation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":41,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"BC Children's Hospital; University of British Columbia","funders":"Canadian Institutes of Health Research; BC Children's Hospital","keywords":"dNaM; Cord blood; Nucleated Red Blood Cell; DNA methylation; Biology; Haematopoiesis; Immunology; Epigenetics; Gestational age; Fetus; Andrology; Stem cell; Genetics; Medicine; Pregnancy; Gene","score_opus":0.044022641106258364,"score_gpt":0.3598239936092188,"score_spread":0.31580135250296043,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2605695321","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99475574,0.0010628413,0.0025827168,0.00003183905,0.000005571105,0.000008266234,0.00093728665,0.000043065957,0.0005726314],"genre_scores_gemma":[0.99576277,0.00044326717,0.0020380607,0.000045945184,0.000004026021,0.000021401183,0.0012227256,0.000013603161,0.0004481966],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99985003,0.0000227059,0.000010086258,0.000049746304,0.000044731234,0.000022619126],"domain_scores_gemma":[0.99983644,0.00004557329,0.00005017314,0.000014708706,0.00003454676,0.000018447672],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00022113409,0.00016238037,0.00028424815,0.0002874065,0.00014544798,0.00029169553,0.00018545249,0.00019238023,0.0013337205],"category_scores_gemma":[0.00058441056,0.00010933966,0.00019468038,0.00033201248,0.00013093337,0.000061348626,0.0002711192,0.00023877356,0.00020231205],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0011604342,0.00003325356,0.35248697,0.00033418226,0.00021112982,0.00031591678,0.00064120936,0.0008823804,0.5964314,0.00020777728,0.0004911838,0.04680427],"study_design_scores_gemma":[0.00001074035,0.00024164669,0.93391836,0.00003382176,0.00013193589,0.0008797005,0.0002266952,0.0020257854,0.060427316,0.0003395713,0.0017521876,0.000012211696],"about_ca_topic_score_codex":0.00453779,"about_ca_topic_score_gemma":0.004207479,"teacher_disagreement_score":0.00453779,"about_ca_system_score_codex":0.00024184053,"about_ca_system_score_gemma":0.00019404637,"threshold_uncertainty_score":0.009022772},"labels":[],"label_agreement":null},{"id":"W2608488687","doi":"10.1186/s13148-017-0345-3","title":"Epigenetic changes in blood leukocytes following an omega-3 fatty acid supplementation","year":2017,"lang":"en","type":"article","venue":"Clinical Epigenetics","topic":"Fatty Acid Research and Health","field":"Nursing","cited_by":97,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Centre hospitalier universitaire de Québec; Université Laval","funders":"Fonds de Recherche du Québec - Santé; Canadian Institutes of Health Research","keywords":"Human genetics; Epigenetics; Omega; Medicine; Bioinformatics; Immunology; Biology; Physiology; Biochemistry; Gene","score_opus":0.12317468618836282,"score_gpt":0.4528934430303398,"score_spread":0.329718756841977,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2608488687","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9945269,0.002057769,0.001972676,0.00008561803,0.000012735284,0.000015923431,0.0005998576,0.00003566511,0.0006928751],"genre_scores_gemma":[0.99552566,0.0009195974,0.0016648455,0.000085018895,0.0000059035688,0.000030057348,0.00035409004,0.000007860686,0.0014068478],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99987936,0.00003016468,0.000008250489,0.000036887588,0.000029033334,0.000016211208],"domain_scores_gemma":[0.9999243,0.0000150060505,0.00003067383,0.000005860403,0.000015370671,0.000008797674],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015714965,0.00013186721,0.00021199408,0.00023853012,0.00011705388,0.00020512872,0.00008286299,0.00017504368,0.0010469761],"category_scores_gemma":[0.00031298204,0.00009017799,0.00017601425,0.00025433578,0.00009306976,0.00008202774,0.00016060844,0.00015623272,0.00012892559],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0030143422,0.00009667882,0.104209065,0.00024442008,0.00018796432,0.00025964345,0.0004411235,0.00024527893,0.83340937,0.00016009522,0.0002496643,0.057482265],"study_design_scores_gemma":[0.000059326932,0.0009100467,0.8200973,0.00006079415,0.0002457207,0.0005370786,0.0004184139,0.0012658796,0.17251076,0.00046014824,0.0034151755,0.000019309779],"about_ca_topic_score_codex":0.0015783109,"about_ca_topic_score_gemma":0.0020928215,"teacher_disagreement_score":0.0015783109,"about_ca_system_score_codex":0.0001268629,"about_ca_system_score_gemma":0.00012229967,"threshold_uncertainty_score":0.0035024881},"labels":[],"label_agreement":null},{"id":"W2612235027","doi":"10.1186/s13148-017-0349-z","title":"Associations between maternal risk factors of adverse pregnancy and birth outcomes and the offspring epigenetic clock of gestational age at birth","year":2017,"lang":"en","type":"article","venue":"Clinical Epigenetics","topic":"Epigenetics and DNA Methylation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":113,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"BC Children's Hospital; University of British Columbia","funders":"Tays; Kuopion Yliopistollinen Sairaala; Academy of Finland; Helsingin ja Uudenmaan Sairaanhoitopiiri; Helsingin Yliopisto","keywords":"dNaM; Offspring; Pregnancy; Obstetrics; Gestational diabetes; Fetus; Medicine; Gestational age; Gestation; Biology; DNA methylation; Genetics","score_opus":0.04429032305621929,"score_gpt":0.34306842724783465,"score_spread":0.2987781041916154,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2612235027","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9980933,0.0006051169,0.00046211848,0.00006163457,0.000007257318,0.0000028452093,0.00032251672,0.0000060318903,0.00043917057],"genre_scores_gemma":[0.99922144,0.00015446015,0.00031744194,0.000010697014,0.000004276955,0.000004230329,0.00011675809,0.0000020967027,0.00016858104],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.999796,0.00006304196,0.0000140388875,0.00006721497,0.00003096378,0.000028729986],"domain_scores_gemma":[0.99860257,0.00036253867,0.0006864658,0.00011708361,0.00008949783,0.00014175361],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00043112037,0.00014649246,0.00015497615,0.0003120792,0.000113283946,0.00023329994,0.00017260647,0.00019152861,0.0015556093],"category_scores_gemma":[0.0019786346,0.0000932131,0.00018262815,0.00029263814,0.00015635359,0.00010164369,0.00022025369,0.00026941134,0.00008644292],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001705921,0.000010799103,0.99460644,0.000011131538,0.000072998824,0.00006791454,0.000056607863,0.00006403064,0.0018907127,0.00008202471,0.000035456032,0.002931402],"study_design_scores_gemma":[7.8364496e-7,0.000024772495,0.99953973,0.0000023876662,0.00001271167,0.000083906394,0.000013693867,0.00009344192,0.00013554526,0.00003625295,0.000055826426,8.987053e-7],"about_ca_topic_score_codex":0.0020181013,"about_ca_topic_score_gemma":0.0021010742,"teacher_disagreement_score":0.0020181013,"about_ca_system_score_codex":0.00019376296,"about_ca_system_score_gemma":0.00019173947,"threshold_uncertainty_score":0.0052040815},"labels":[],"label_agreement":null},{"id":"W2737338545","doi":"10.1186/s13148-017-0371-1","title":"Differential methylation at MHC in CD4+ T cells is associated with multiple sclerosis independently of HLA-DRB1","year":2017,"lang":"en","type":"article","venue":"Clinical Epigenetics","topic":"Epigenetics and DNA Methylation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":88,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Diamantina Institute, University of Queensland; Canadian Institutes of Health Research; Hunter Medical Research Institute; Multiple Sclerosis Australia","keywords":"DNA methylation; Epigenetics; Differentially methylated regions; Multiple sclerosis; Human leukocyte antigen; Major histocompatibility complex; Methylation; Biology; Cohort; Oncology; Immunology; Genetics; Internal medicine; Medicine; Gene; Gene expression; Antigen","score_opus":0.07427371494508753,"score_gpt":0.33002103364295643,"score_spread":0.25574731869786893,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2737338545","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9992725,0.00019339318,0.00015207105,0.00001929539,0.0000023354025,0.0000025251961,0.00013828572,0.000008602111,0.00021096312],"genre_scores_gemma":[0.9994838,0.000051115956,0.00011225146,0.000010283523,0.000004328788,0.0000037392933,0.0001064568,0.000004595647,0.00022343549],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9997836,0.00004648254,0.00001663048,0.00008277744,0.000034419478,0.000036040838],"domain_scores_gemma":[0.9996045,0.00009652069,0.00014610289,0.00004291396,0.00003924655,0.00007080817],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00019391507,0.00018492433,0.0003054159,0.00052423496,0.00020900542,0.00024525676,0.00016474185,0.0002391812,0.0030092075],"category_scores_gemma":[0.0008162845,0.00016497796,0.00018574182,0.00041460217,0.00020095547,0.00009052548,0.0001742771,0.00027262102,0.00029179707],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0024452067,0.000057396825,0.77904856,0.000064475644,0.00025397542,0.0004327818,0.00031134384,0.00019272715,0.20481926,0.00006053035,0.00020056745,0.012113156],"study_design_scores_gemma":[0.000015416832,0.00010901151,0.99602425,0.0000037872123,0.00004863473,0.00081032387,0.000056617886,0.00018552186,0.0025146715,0.000044562796,0.00018359843,0.0000035823862],"about_ca_topic_score_codex":0.0018075986,"about_ca_topic_score_gemma":0.0017061399,"teacher_disagreement_score":0.0030092075,"about_ca_system_score_codex":0.00012454287,"about_ca_system_score_gemma":0.000099774545,"threshold_uncertainty_score":0.010066748},"labels":[],"label_agreement":null},{"id":"W2737752879","doi":"10.1186/s13148-017-0370-2","title":"Maternal blood contamination of collected cord blood can be identified using DNA methylation at three CpGs","year":2017,"lang":"en","type":"article","venue":"Clinical Epigenetics","topic":"Prenatal Screening and Diagnostics","field":"Medicine","cited_by":86,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Learning Partnership; BC Children's Hospital; University of British Columbia","funders":"Eunice Kennedy Shriver National Institute of Child Health and Human Development; Medical Research Council; National Institutes of Health; Signe ja Ane Gyllenbergin Säätiö; Jane ja Aatos Erkon Säätiö; Novo Nordisk Fonden; Foundation for the National Institutes of Health; Academy of Finland; Novo Nordisk; South African Medical Research Council; Päivikki ja Sakari Sohlbergin Säätiö; National Research Foundation; Emil Aaltosen Säätiö; AllerGen; Canadian Institutes of Health Research; Suomen Lääketieteen Säätiö; Helsingin Yliopisto; Bill and Melinda Gates Foundation","keywords":"dNaM; Cord blood; Pyrosequencing; DNA methylation; Epigenetics; Biology; Contamination; Population; Cohort; Medicine; Physiology; Andrology; Bioinformatics; Computational biology; Genetics; Internal medicine; Environmental health; Gene; Ecology","score_opus":0.12217678896581619,"score_gpt":0.39637545640672633,"score_spread":0.27419866744091015,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2737752879","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9259546,0.0056465864,0.0597777,0.00045487838,0.000111437555,0.00015342655,0.0037339905,0.0003624774,0.003804807],"genre_scores_gemma":[0.96679115,0.0013639327,0.028380401,0.0004243289,0.00004521498,0.0001354777,0.0016688448,0.00007090916,0.001119785],"study_design_codex":"observational","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9971637,0.00068466074,0.00025874714,0.0007140261,0.0010365999,0.00014227626],"domain_scores_gemma":[0.99500895,0.0017765247,0.0019390892,0.00053498166,0.00062548317,0.00011499377],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0026516807,0.00037241075,0.00035616316,0.0010966073,0.00035471388,0.00075558305,0.00054064277,0.0005984948,0.0016466979],"category_scores_gemma":[0.0074928934,0.0003117943,0.0004181239,0.001311087,0.0005418435,0.00020795825,0.0006086354,0.0005523749,0.00038617494],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0007314984,0.00005982698,0.76407886,0.0005486953,0.0005864725,0.00087520346,0.00079999765,0.0006781074,0.16288404,0.00082018337,0.0010564835,0.06688063],"study_design_scores_gemma":[0.000024105857,0.00053057115,0.73966175,0.00031554967,0.0005978465,0.004579209,0.00035673525,0.002553001,0.23664251,0.0015219484,0.013165562,0.000051194125],"about_ca_topic_score_codex":0.0016471165,"about_ca_topic_score_gemma":0.0027237001,"teacher_disagreement_score":0.0026516807,"about_ca_system_score_codex":0.00034967702,"about_ca_system_score_gemma":0.00038157628,"threshold_uncertainty_score":0.014023602},"labels":[],"label_agreement":null},{"id":"W2752319470","doi":"10.1186/s13148-017-0390-y","title":"Efficacy of EZH2 inhibitory drugs in human papillomavirus-positive and human papillomavirus-negative oropharyngeal squamous cell carcinomas","year":2017,"lang":"en","type":"article","venue":"Clinical Epigenetics","topic":"Epigenetics and DNA Methylation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":28,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta Hospital; Alberta Hospital Edmonton; University of Alberta","funders":"University Hospital Foundation; University of Alberta","keywords":"EZH2; Cancer research; Cell culture; Histone methyltransferase; Biology; Epigenetics; Cell growth; Methyltransferase; Histone H3; Cell; Methylation; Gene; Genetics","score_opus":0.030214183712029857,"score_gpt":0.35121431704476813,"score_spread":0.32100013333273825,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2752319470","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99231297,0.0055595296,0.00025841562,0.00005515462,0.000030387,0.000045122615,0.00023430354,0.000032522643,0.0014715588],"genre_scores_gemma":[0.99558973,0.0026886251,0.00029107367,0.000032499727,0.000011968953,0.000032211126,0.00048870314,0.000006296803,0.00085896015],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99985254,0.00003813638,0.000020468451,0.000020673655,0.000040044182,0.000028027234],"domain_scores_gemma":[0.9998946,0.000032343527,0.00001910047,0.000011058659,0.00001552598,0.000027440854],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002944376,0.00028673213,0.00050821464,0.00031443496,0.00011921997,0.00025443765,0.00021053207,0.00020858477,0.0015779276],"category_scores_gemma":[0.00024457884,0.000106998305,0.00028901064,0.00022537314,0.00017907422,0.00021174076,0.00015767604,0.00040884482,0.00017534468],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.007990534,0.0013917397,0.0059636277,0.0005546839,0.00027870628,0.00021022829,0.00007326791,0.00071604963,0.922989,0.0001885224,0.00046457446,0.059179023],"study_design_scores_gemma":[0.00081315864,0.022471469,0.05545029,0.000028535991,0.00056745054,0.00069561234,0.000101836216,0.0010214825,0.9115735,0.000061855324,0.0072005317,0.000014263092],"about_ca_topic_score_codex":0.0006544337,"about_ca_topic_score_gemma":0.0014104795,"teacher_disagreement_score":0.0015779276,"about_ca_system_score_codex":0.00023336914,"about_ca_system_score_gemma":0.00021440821,"threshold_uncertainty_score":0.005278647},"labels":[],"label_agreement":null},{"id":"W2782684324","doi":"10.1186/s13148-018-0439-6","title":"DNA methylation as a predictor of fetal alcohol spectrum disorder","year":2018,"lang":"en","type":"article","venue":"Clinical Epigenetics","topic":"Prenatal Substance Exposure Effects","field":"Medicine","cited_by":114,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Learning Partnership; Canada's Michael Smith Genome Sciences Centre; University of Manitoba; Queen's University; University of British Columbia; BC Children's Hospital","funders":"National Institute on Alcohol Abuse and Alcoholism; Networks of Centres of Excellence of Canada; National Institutes of Health; Kids Brain Health Network; Canadian Network for Research and Innovation in Machining Technology, Natural Sciences and Engineering Research Council of Canada; Australian Government; Canadian Institute for Advanced Research; Canadian Foundation on Fetal Alcohol Research; Fondation Brain Canada","keywords":"DNA methylation; Epigenetics; Autism spectrum disorder; Cohort; Fetal Alcohol Spectrum Disorder; Methylation; Prenatal alcohol exposure; Fetal alcohol syndrome; Medicine; Autism; Epigenome; Bioinformatics; Biology; Clinical psychology; Oncology; Genetics; Internal medicine; Pregnancy; Psychiatry; DNA; Gene","score_opus":0.03746357615836947,"score_gpt":0.3686286606701542,"score_spread":0.3311650845117847,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2782684324","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98150945,0.00086076214,0.005686868,0.00033814774,0.000029410168,0.000035435874,0.010776158,0.00022326555,0.00054042717],"genre_scores_gemma":[0.9883122,0.00018208913,0.0039024076,0.00006137036,0.000019536588,0.000030170257,0.007186736,0.000018339279,0.00028711243],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9996803,0.00007586975,0.000021741876,0.00014872733,0.000041803185,0.000031568514],"domain_scores_gemma":[0.9989483,0.000559114,0.00018336375,0.00007040445,0.00015440583,0.00008433698],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008007761,0.00035948397,0.0002901293,0.0007561089,0.0002211491,0.00032581983,0.0002777933,0.00034572452,0.0017575686],"category_scores_gemma":[0.003052572,0.00013263445,0.00043957218,0.00047928854,0.00016711568,0.00015246637,0.0003921171,0.00065991894,0.0003949446],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00053747743,0.000048255926,0.96748394,0.00006285122,0.0003008326,0.00006343908,0.0000462398,0.006828985,0.0044601914,0.000071667884,0.0016829086,0.018413184],"study_design_scores_gemma":[0.00008471406,0.0004337705,0.8643617,0.00006320572,0.00051418366,0.0006235891,0.00010259487,0.117983826,0.010286302,0.0009830125,0.004528095,0.00003487836],"about_ca_topic_score_codex":0.007053245,"about_ca_topic_score_gemma":0.0074867047,"teacher_disagreement_score":0.007053245,"about_ca_system_score_codex":0.00037699603,"about_ca_system_score_gemma":0.00037299472,"threshold_uncertainty_score":0.014024377},"labels":[],"label_agreement":null},{"id":"W2788635059","doi":"10.1186/s13148-017-0436-1","title":"The signature of liver cancer in immune cells DNA methylation","year":2018,"lang":"en","type":"article","venue":"Clinical Epigenetics","topic":"Epigenetics and DNA Methylation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":70,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Concordia University; McGill University","funders":"Canadian Institutes of Health Research; Beijing Municipal Science and Technology Commission; National Natural Science Foundation of China","keywords":"Hepatocellular carcinoma; Immune system; DNA methylation; Peripheral blood mononuclear cell; Immunology; Liver cancer; Immunotherapy; Cancer; Biology; Methylation; Medicine; Cancer research; Gene; Internal medicine; Gene expression; Genetics","score_opus":0.026960518066447475,"score_gpt":0.3544362898326305,"score_spread":0.32747577176618303,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2788635059","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9939892,0.0012236363,0.0024776075,0.00009112226,0.00000988947,0.000012306199,0.00070765003,0.000048338214,0.0014404135],"genre_scores_gemma":[0.99811625,0.00022754319,0.0007783328,0.000046857735,0.0000060809393,0.000009296843,0.00025763843,0.0000053042286,0.0005527146],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99987125,0.00002463904,0.000006519076,0.000050290917,0.000027559461,0.000019662133],"domain_scores_gemma":[0.99986494,0.000031420248,0.000044461154,0.00001635647,0.000023741146,0.000019149036],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015472427,0.00009862579,0.00017663058,0.00032414895,0.00012542323,0.0002116695,0.00008805461,0.00014958302,0.0011521912],"category_scores_gemma":[0.00037076534,0.000088492336,0.00010006257,0.00024942032,0.000167446,0.00008156683,0.00018723244,0.00019785302,0.00021622158],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006907844,0.00002212963,0.13620795,0.000090857466,0.00007648397,0.00016386238,0.0002230865,0.00019404305,0.8389539,0.000207313,0.00022754184,0.022942044],"study_design_scores_gemma":[0.00001520617,0.0003081309,0.8419447,0.000011971232,0.00007004344,0.0015973224,0.00015116879,0.0011271418,0.15148737,0.00063508324,0.0026414664,0.000010469354],"about_ca_topic_score_codex":0.0007298524,"about_ca_topic_score_gemma":0.0011465183,"teacher_disagreement_score":0.0011521912,"about_ca_system_score_codex":0.00012446096,"about_ca_system_score_gemma":0.00011659124,"threshold_uncertainty_score":0.0038544536},"labels":[],"label_agreement":null},{"id":"W2790205651","doi":"10.1186/s13148-018-0468-1","title":"No evidence for association of MTHFR 677C&gt;T and 1298A&gt;C variants with placental DNA methylation","year":2018,"lang":"en","type":"article","venue":"Clinical Epigenetics","topic":"Folate and B Vitamins Research","field":"Medicine","cited_by":31,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Child and Family Research Institute; BC Children's Hospital; University of British Columbia","funders":"Canadian Institutes of Health Research; BC Children's Hospital","keywords":"Methylenetetrahydrofolate reductase; dNaM; Single-nucleotide polymorphism; Genotype; DNA methylation; MTRR; Preeclampsia; Biology; Internal medicine; Pregnancy; Genetics; Medicine; Gene; Gene expression","score_opus":0.1264680284491882,"score_gpt":0.4478943262502066,"score_spread":0.3214262978010184,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2790205651","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99501497,0.002304503,0.000491146,0.00016083744,0.000033524422,0.000009700775,0.00044261885,0.00001432479,0.0015283462],"genre_scores_gemma":[0.9988244,0.00051215716,0.00015076877,0.0000368815,0.000026875043,0.000005994008,0.00016107658,0.0000075267576,0.000274275],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9990408,0.00026948462,0.000103097766,0.00023904769,0.00023191646,0.00011569705],"domain_scores_gemma":[0.99563146,0.0020721597,0.0012925075,0.00039407375,0.00021956059,0.00039023833],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007971484,0.0003036304,0.00057053723,0.000807112,0.00034485583,0.00043182122,0.00051495124,0.00070458156,0.004757755],"category_scores_gemma":[0.0049837045,0.00024943886,0.00075441826,0.0010502442,0.0004961421,0.00019245253,0.0002814112,0.000650632,0.00033688362],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0013085832,0.000042067968,0.98373574,0.00016549014,0.0006011399,0.0016654858,0.00024301595,0.00006474275,0.006520955,0.00018060583,0.00018491133,0.005287217],"study_design_scores_gemma":[0.000038519724,0.0003815843,0.99078536,0.00006182862,0.0005459842,0.0053420975,0.000113961694,0.0003315325,0.001042297,0.00018683008,0.0011585214,0.000011348963],"about_ca_topic_score_codex":0.0035602956,"about_ca_topic_score_gemma":0.0028156491,"teacher_disagreement_score":0.004757755,"about_ca_system_score_codex":0.0002062763,"about_ca_system_score_gemma":0.00033975788,"threshold_uncertainty_score":0.015916288},"labels":[],"label_agreement":null},{"id":"W2795277537","doi":"10.1186/s13148-018-0464-5","title":"Altered DNA methylation is associated with aberrant gene expression in parenchymal but not airway fibroblasts isolated from individuals with COPD","year":2018,"lang":"en","type":"article","venue":"Clinical Epigenetics","topic":"Epigenetics and DNA Methylation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":49,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"St. Joseph’s Healthcare Hamilton; McMaster University; BC Children's Hospital; University of British Columbia","funders":"Medical Research Council; Canadian Institutes of Health Research; Rosetrees Trust","keywords":"DNA methylation; COPD; Epigenetics; CpG site; Parenchyma; Biology; Epigenomics; Methylation; Gene expression; Immunology; Differentially methylated regions; Pathology; DNA; Gene; Genetics; Medicine; Internal medicine","score_opus":0.033624536963469016,"score_gpt":0.31313808031719315,"score_spread":0.27951354335372414,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2795277537","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.997355,0.00063959276,0.0007644075,0.000029476072,0.000011917794,0.000017927689,0.00071670936,0.000016548429,0.0004485668],"genre_scores_gemma":[0.9971897,0.00029239903,0.00075554673,0.000051483337,0.000008831428,0.000036784393,0.0009155531,0.000010279389,0.00073943275],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998292,0.00001586537,0.000012257937,0.000062348736,0.00004956919,0.000030727035],"domain_scores_gemma":[0.9998543,0.000032151525,0.000035754096,0.000015147787,0.000031343185,0.000031217533],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012055407,0.00020918825,0.00027133952,0.0005022582,0.00022662705,0.00025183233,0.00012329378,0.0002809367,0.0017363159],"category_scores_gemma":[0.00028886495,0.0001279523,0.00020062008,0.0003022239,0.00021159464,0.000062967156,0.00022545246,0.00031005664,0.0003520029],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00037845928,0.000024994446,0.03254195,0.00005041607,0.000043247197,0.00019503277,0.00015594186,0.000023834224,0.96424204,0.000011698707,0.000068305766,0.0022640678],"study_design_scores_gemma":[0.000027509363,0.00054952764,0.8246395,0.000014478358,0.000112627786,0.0021633778,0.00049865834,0.00035181106,0.17057446,0.000077362856,0.0009788526,0.00001188638],"about_ca_topic_score_codex":0.0010156846,"about_ca_topic_score_gemma":0.001705872,"teacher_disagreement_score":0.0017363159,"about_ca_system_score_codex":0.00009566226,"about_ca_system_score_gemma":0.00009305706,"threshold_uncertainty_score":0.0058085322},"labels":[],"label_agreement":null},{"id":"W2796003820","doi":"10.1186/s13148-018-0463-6","title":"Epigenetic regulation of placental gene expression in transcriptional subtypes of preeclampsia","year":2018,"lang":"en","type":"article","venue":"Clinical Epigenetics","topic":"Pregnancy and preeclampsia studies","field":"Medicine","cited_by":95,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Ottawa; University of British Columbia; BC Children's Hospital; University of Toronto","funders":"Canadian Institutes of Health Research; BC Children's Hospital","keywords":"Epigenetics; Biology; CpG site; DNA methylation; Epigenome; Gene; Methylation; Gene expression; Regulation of gene expression; Transcriptome; Genetics; Transcriptional regulation; Microarray; Gene cluster; Differentially methylated regions; Microarray analysis techniques; Promoter; Human genetics; Gene expression profiling","score_opus":0.0575544254731545,"score_gpt":0.3514449436248903,"score_spread":0.29389051815173584,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2796003820","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9968262,0.00066049874,0.0013978299,0.000037204536,0.0000025952363,0.000009937644,0.00045967216,0.000022514037,0.00058364676],"genre_scores_gemma":[0.9981335,0.00015648319,0.0006640564,0.000016450134,0.0000030311805,0.000011315375,0.0004874307,0.000006010238,0.00052182464],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99988866,0.000016854334,0.00000765961,0.000037124737,0.000028254135,0.000021441872],"domain_scores_gemma":[0.99988055,0.000030185494,0.00003942179,0.000018545736,0.000017605062,0.0000135917135],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00020108314,0.00011831973,0.00013029209,0.00031449314,0.00012787887,0.00019996484,0.0001577532,0.00012383093,0.0013516208],"category_scores_gemma":[0.00034965156,0.00007879414,0.000103995924,0.00026164643,0.00014939472,0.000072418305,0.00024894017,0.00016500251,0.00014639444],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00069666415,0.000030123329,0.21109863,0.00010313968,0.00006063333,0.0001922716,0.0003664093,0.00025417565,0.76850986,0.00024585275,0.00016197763,0.018280247],"study_design_scores_gemma":[0.000008807741,0.00010039863,0.933946,0.0000082909155,0.000036037738,0.00076792686,0.000096434625,0.0005273658,0.06316327,0.00017715472,0.0011646196,0.0000036847744],"about_ca_topic_score_codex":0.0008640004,"about_ca_topic_score_gemma":0.0014312475,"teacher_disagreement_score":0.0013516208,"about_ca_system_score_codex":0.00017653276,"about_ca_system_score_gemma":0.00011640062,"threshold_uncertainty_score":0.0045216084},"labels":[],"label_agreement":null},{"id":"W2803978842","doi":"10.1186/s13148-018-0453-8","title":"Peripheral blood epi-signature of Claes-Jensen syndrome enables sensitive and specific identification of patients and healthy carriers with pathogenic mutations in KDM5C","year":2018,"lang":"en","type":"article","venue":"Clinical Epigenetics","topic":"Genomics and Rare Diseases","field":"Biochemistry, Genetics and Molecular Biology","cited_by":70,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Victoria Hospital; McMaster University; London Health Sciences Centre; Western University","funders":"Children's Health Foundation; London Health Sciences Centre; Children's Health Research Institute","keywords":"DNA methylation; Genetics; Biology; Human genetics; Epigenetics; Histone; Bioinformatics; Gene; Gene expression","score_opus":0.011180590839219717,"score_gpt":0.27545410327277564,"score_spread":0.2642735124335559,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2803978842","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99402034,0.0000640307,0.0051139942,0.000025090425,0.0000029236137,0.0000084308995,0.00038402664,0.000104716266,0.0002764429],"genre_scores_gemma":[0.99641514,0.000029687924,0.002521252,0.000013441278,0.000002316343,0.0000072825023,0.0007893503,0.00000864403,0.00021280075],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9999232,0.00001966383,0.0000055237133,0.000030166464,0.000011277652,0.00001009894],"domain_scores_gemma":[0.99983835,0.00007041022,0.00002588368,0.000018579136,0.000022049891,0.0000246603],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00017730368,0.00030722245,0.00027628432,0.00025724398,0.000076601,0.00022277971,0.00018536762,0.00019030787,0.0008330012],"category_scores_gemma":[0.00079469936,0.00008979032,0.00020824654,0.00013218157,0.00007245899,0.000099865545,0.00024586244,0.00015451756,0.00016716571],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0040559606,0.00020454076,0.59222823,0.00014021668,0.0003894761,0.0017722185,0.00022241737,0.10406593,0.16759309,0.0006749504,0.001918079,0.12673491],"study_design_scores_gemma":[0.00007347399,0.00034773693,0.23370181,0.0000148909885,0.00012280731,0.0011146025,0.00008170058,0.7378725,0.025125572,0.00073694787,0.00078485557,0.000023120254],"about_ca_topic_score_codex":0.0034523602,"about_ca_topic_score_gemma":0.0033740732,"teacher_disagreement_score":0.0034523602,"about_ca_system_score_codex":0.00011693406,"about_ca_system_score_gemma":0.00020592139,"threshold_uncertainty_score":0.0068645477},"labels":[],"label_agreement":null},{"id":"W2807302898","doi":"10.1186/s13148-018-0490-3","title":"Epigenome-wide DNA methylation profiling of periprostatic adipose tissue in prostate cancer patients with excess adiposity—a pilot study","year":2018,"lang":"en","type":"article","venue":"Clinical Epigenetics","topic":"Epigenetics and DNA Methylation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":32,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba","funders":"Natural Sciences and Engineering Research Council of Canada; China Scholarship Council; University of Manitoba; Manitoba Health Research Council","keywords":"DNA methylation; Epigenetics; Prostate cancer; Adipose tissue; Methylation; CpG site; Biology; Epigenome; Internal medicine; Endocrinology; Cancer; Oncology; Medicine; Bioinformatics; Genetics; Gene; Gene expression","score_opus":0.03084195720252997,"score_gpt":0.34626138723906785,"score_spread":0.3154194300365379,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2807302898","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99918336,0.00022835785,0.00025416096,0.000010856333,0.0000021499525,0.0000081282415,0.00018320305,0.0000038613875,0.00012587123],"genre_scores_gemma":[0.9994287,0.00006925923,0.00013788496,0.000015313319,0.000004035621,0.000006079147,0.00017747379,0.0000020999175,0.0001590173],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9999021,0.000020228674,0.0000064551596,0.000038381164,0.00001533724,0.00001743322],"domain_scores_gemma":[0.99986756,0.000018293773,0.00003624361,0.00001488962,0.00002295037,0.000039985407],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015113602,0.0001865444,0.0002617138,0.0003008698,0.0002582513,0.00031408714,0.00013349955,0.00020512714,0.0009220475],"category_scores_gemma":[0.00028726514,0.00015393579,0.00025163384,0.00033259633,0.0001171955,0.0001172743,0.00023840413,0.00027873696,0.00012174221],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0015697991,0.0001151287,0.9459643,0.00005893971,0.00022905861,0.0003217178,0.0002878845,0.00015283933,0.04026676,0.00002755326,0.00015097014,0.010854944],"study_design_scores_gemma":[0.000015251743,0.00030972622,0.99687284,0.000002996157,0.000099746125,0.0006149508,0.00011480358,0.00030917788,0.0012293058,0.000018967692,0.00040761672,0.0000046646855],"about_ca_topic_score_codex":0.0014171583,"about_ca_topic_score_gemma":0.0022451002,"teacher_disagreement_score":0.0014171583,"about_ca_system_score_codex":0.0000960566,"about_ca_system_score_gemma":0.00013083204,"threshold_uncertainty_score":0.0030846},"labels":[],"label_agreement":null},{"id":"W2883846183","doi":"10.1186/s13148-018-0526-8","title":"Loss of maternal EED results in postnatal overgrowth","year":2018,"lang":"en","type":"article","venue":"Clinical Epigenetics","topic":"Epigenetics and DNA Methylation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":47,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"BC Children's Hospital; University of British Columbia","funders":"National Health and Medical Research Council; State Government of Victoria; Monash University","keywords":"Biology; Offspring; Germline; Oocyte; Epigenetics; Genetics; Epigenome; Histone; Phenotype; Germline mosaicism; Germline mutation; Oogenesis; DNA methylation; Mutation; Gene; Pregnancy; Embryo; Gene expression","score_opus":0.02903467428882416,"score_gpt":0.3539878003018067,"score_spread":0.32495312601298254,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2883846183","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98035836,0.002931098,0.008714515,0.000354728,0.00011939739,0.000055493183,0.0024355848,0.00054306485,0.0044877133],"genre_scores_gemma":[0.9768958,0.002725237,0.0061360686,0.00021627374,0.000032808333,0.00011122058,0.0014431324,0.00026088412,0.012178499],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99968624,0.000022004442,0.000041609732,0.000084956,0.00012700682,0.00003814808],"domain_scores_gemma":[0.99924326,0.0001362026,0.0003564265,0.000077655655,0.000040886778,0.00014566143],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00018011402,0.0006322914,0.00029112902,0.0006324397,0.00017917347,0.000320775,0.00040215882,0.0005407636,0.0043213465],"category_scores_gemma":[0.00033484283,0.0003266593,0.00035636168,0.00019880175,0.00054449996,0.00020200766,0.00077480933,0.0008185874,0.0008017699],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00020041848,0.000034104116,0.0016571828,0.00006153822,0.00001920295,0.0010893982,0.00003135479,0.00006711033,0.9927048,0.00023784602,0.00011833895,0.0037786],"study_design_scores_gemma":[0.000055491706,0.00037481007,0.048020776,0.000052834846,0.00009038118,0.008172755,0.00011574216,0.0006206795,0.9315635,0.00033152002,0.010583705,0.000017831768],"about_ca_topic_score_codex":0.0006186406,"about_ca_topic_score_gemma":0.0013905169,"teacher_disagreement_score":0.0043213465,"about_ca_system_score_codex":0.00026452495,"about_ca_system_score_gemma":0.0003387328,"threshold_uncertainty_score":0.014456332},"labels":[],"label_agreement":null},{"id":"W2897267849","doi":"10.1186/s13148-018-0556-2","title":"Systematic evaluation of DNA methylation age estimation with common preprocessing methods and the Infinium MethylationEPIC BeadChip array","year":2018,"lang":"en","type":"article","venue":"Clinical Epigenetics","topic":"Epigenetics and DNA Methylation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":168,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"BC Children's Hospital; University of British Columbia","funders":"National Institute on Aging; European Commission; Michael Smith Health Research BC; European Research Council; National Institutes of Health; British Columbia Lung Association; Canadian Institutes of Health Research; Mitacs; Centre National de la Recherche Scientifique; Canadian Institute for Advanced Research","keywords":"dNaM; DNA methylation; CpG site; Epigenetics; Bioinformatics; Computational biology; Biology; Oncology; Genetics; Medicine; Gene","score_opus":0.06449069855221569,"score_gpt":0.4392783768135737,"score_spread":0.374787678261358,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2897267849","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.30274904,0.010906838,0.6749882,0.0004321992,0.00041031739,0.0023598198,0.0036189754,0.0025246069,0.0020099168],"genre_scores_gemma":[0.37770286,0.002587731,0.60759926,0.0005192793,0.00020733933,0.0029902745,0.006381932,0.0010719098,0.00093936524],"study_design_codex":"design_other","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.96957034,0.015214871,0.002885461,0.005519255,0.0064787455,0.00033130072],"domain_scores_gemma":[0.9390372,0.026098946,0.006894338,0.01132596,0.016112978,0.0005305587],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.04208231,0.0020425324,0.0014352164,0.002578768,0.0009592277,0.0013239003,0.0016273384,0.00097041787,0.00093191385],"category_scores_gemma":[0.062273316,0.0010002838,0.0023027884,0.0021723795,0.0010313792,0.0006335546,0.0021302428,0.00094357517,0.00059212523],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.004899743,0.0006875848,0.24809767,0.005791619,0.00987648,0.00028356953,0.0012810775,0.015141207,0.28168628,0.0016685597,0.005535733,0.42505047],"study_design_scores_gemma":[0.0005334689,0.0061764913,0.4384086,0.0007905783,0.008485351,0.001414069,0.0004137456,0.06810511,0.44501328,0.0023732204,0.027798472,0.00048752586],"about_ca_topic_score_codex":0.001985645,"about_ca_topic_score_gemma":0.00455721,"teacher_disagreement_score":0.04208231,"about_ca_system_score_codex":0.000797129,"about_ca_system_score_gemma":0.0019083414,"threshold_uncertainty_score":0.22255516},"labels":[],"label_agreement":null},{"id":"W2900597399","doi":"10.1186/s13148-018-0575-z","title":"A urine-based DNA methylation assay, ProCUrE, to identify clinically significant prostate cancer","year":2018,"lang":"en","type":"article","venue":"Clinical Epigenetics","topic":"Prostate Cancer Diagnosis and Treatment","field":"Medicine","cited_by":37,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University Health Network; Sinai Health System; Lunenfeld-Tanenbaum Research Institute; University of Toronto","funders":"National Cancer Institute; Prostate Cancer Canada; Movember Foundation","keywords":"Prostate cancer; Medicine; Rectal examination; Oncology; Prostate; Internal medicine; PCA3; Cohort; DNA methylation; Prostate biopsy; Cancer; Prostate-specific antigen; Gynecology; Biology","score_opus":0.0855817391053888,"score_gpt":0.4562430640439414,"score_spread":0.3706613249385526,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2900597399","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.89493084,0.005087676,0.091107875,0.0005089064,0.00011738157,0.00018064033,0.0041708536,0.001001405,0.0028945678],"genre_scores_gemma":[0.9610624,0.0006860131,0.03506668,0.00032807273,0.000052191335,0.000104863146,0.0013763844,0.000035684283,0.00128775],"study_design_codex":"observational","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9987852,0.0003985345,0.00006076476,0.00034646667,0.00034890624,0.000060181534],"domain_scores_gemma":[0.99840266,0.00056070206,0.0005648788,0.00015424822,0.00019471449,0.00012285128],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001522755,0.0005415982,0.0003931419,0.00096909713,0.00020186942,0.0006029903,0.00039560592,0.0005580388,0.0011513502],"category_scores_gemma":[0.0029191815,0.00023819011,0.00039587283,0.00055942824,0.0003077111,0.00019797022,0.00045777173,0.0006718548,0.0003437534],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.001410465,0.00039684973,0.62213355,0.00040051193,0.00079496537,0.00019005827,0.00019538369,0.0067663556,0.24048369,0.00045858786,0.0020313037,0.12473836],"study_design_scores_gemma":[0.00013557021,0.003165577,0.5157959,0.00012191381,0.0006419562,0.0034316804,0.00012797493,0.09301792,0.37470224,0.0009979623,0.0077321283,0.00012911894],"about_ca_topic_score_codex":0.00042150018,"about_ca_topic_score_gemma":0.0015164886,"teacher_disagreement_score":0.001522755,"about_ca_system_score_codex":0.00022163034,"about_ca_system_score_gemma":0.00026994818,"threshold_uncertainty_score":0.008053184},"labels":[],"label_agreement":null},{"id":"W2904265522","doi":"10.1186/s13148-018-0591-z","title":"Machine learning selected smoking-associated DNA methylation signatures that predict HIV prognosis and mortality","year":2018,"lang":"en","type":"article","venue":"Clinical Epigenetics","topic":"Epigenetics and DNA Methylation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":68,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institute of Allergy and Infectious Diseases; York University; National Institute on Drug Abuse; National Heart, Lung, and Blood Institute; Yale University; Vanderbilt University; National Center for PTSD, U.S. Department of Veterans Affairs; School of Medicine, Emory University; National Cancer Institute; Emory University; National Institute of General Medical Sciences; School of Medicine, Vanderbilt University","keywords":"Epigenome; DNA methylation; CpG site; Medicine; Population; Oncology; Methylation; Biology; Internal medicine; Bioinformatics; Genetics; Gene; Environmental health","score_opus":0.04033477245716474,"score_gpt":0.33786550074035754,"score_spread":0.2975307282831928,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2904265522","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9758462,0.0005437846,0.021894498,0.0002832383,0.00002920299,0.000041070525,0.00051770255,0.00020261983,0.00064171443],"genre_scores_gemma":[0.9929563,0.00011082752,0.0057263416,0.000060898456,0.000023124281,0.000026138874,0.00083959603,0.000009184459,0.00024758425],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99962234,0.00015854111,0.000025513771,0.00010511928,0.00004017464,0.000048329024],"domain_scores_gemma":[0.99848986,0.00092270767,0.00018242077,0.00013034265,0.00020215184,0.000072472896],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.002023426,0.00054318743,0.00083616085,0.00082481565,0.0002676527,0.00053184363,0.00050754246,0.00049174106,0.00074596825],"category_scores_gemma":[0.0043172473,0.00017946395,0.0008232343,0.00050314586,0.00018575952,0.00034516864,0.00043552427,0.0007736101,0.00022735965],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00078464416,0.00048048623,0.6684632,0.00009969355,0.0013245753,0.00016826439,0.00013920848,0.1960193,0.008249782,0.00026492414,0.0015454062,0.1224605],"study_design_scores_gemma":[0.000042009626,0.0003138202,0.08010528,0.000034354616,0.00026563284,0.000109044195,0.00004869281,0.91500217,0.0022306144,0.0014290003,0.00039546806,0.00002390495],"about_ca_topic_score_codex":0.0030925,"about_ca_topic_score_gemma":0.0036454587,"teacher_disagreement_score":0.0030925,"about_ca_system_score_codex":0.00040113367,"about_ca_system_score_gemma":0.0005166612,"threshold_uncertainty_score":0.01070106},"labels":[],"label_agreement":null},{"id":"W2907917440","doi":"10.1186/s13148-018-0606-9","title":"Epigenome-wide association study of serum cotinine in current smokers reveals novel genetically driven loci","year":2019,"lang":"en","type":"article","venue":"Clinical Epigenetics","topic":"Epigenetics and DNA Methylation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":59,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Centre for Addiction and Mental Health","funders":"European Research Council; Sigrid Juséliuksen Säätiö; Canadian Institutes of Health Research; Helsingin Yliopiston Tiedesäätiö; Nederlandse Organisatie voor Wetenschappelijk Onderzoek; Academy of Finland","keywords":"Cotinine; DNA methylation; Epigenetics; CpG site; Methylation; Epigenome; Single-nucleotide polymorphism; Nicotine; Biology; Genetics; Genome-wide association study; Biomarker; Genotype; Medicine; Internal medicine; Gene","score_opus":0.03549484570916981,"score_gpt":0.35115671149750766,"score_spread":0.3156618657883378,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2907917440","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9974788,0.00045818006,0.001394802,0.000050909162,0.0000082007355,0.000008889607,0.0003359061,0.000021422125,0.00024288907],"genre_scores_gemma":[0.9991079,0.000069938316,0.00054132845,0.00001845032,0.000005077087,0.000006316199,0.00012788987,0.0000051300112,0.000117895106],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9995964,0.000095119074,0.000031410345,0.00016795415,0.000066741435,0.000042288688],"domain_scores_gemma":[0.99907815,0.000323876,0.0002768072,0.00012654823,0.000082485625,0.00011203503],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006230462,0.00027256206,0.00029064648,0.00045341795,0.00023943675,0.00034162935,0.00032197297,0.0004147245,0.0013233981],"category_scores_gemma":[0.0015000877,0.00014098737,0.00052660954,0.00067622267,0.00024134897,0.00009829549,0.00025121288,0.00043216572,0.000116104646],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0007569224,0.00005547605,0.9410922,0.000046475736,0.0007433877,0.00028264188,0.00015644197,0.00018794081,0.051404197,0.00013176247,0.000102030426,0.005040535],"study_design_scores_gemma":[0.000010009954,0.00006885966,0.9975063,0.0000035219498,0.00017281198,0.00023811373,0.000018692763,0.00042800428,0.0013153508,0.00007083726,0.00016428852,0.000003200075],"about_ca_topic_score_codex":0.0041909115,"about_ca_topic_score_gemma":0.006553912,"teacher_disagreement_score":0.0041909115,"about_ca_system_score_codex":0.00015618655,"about_ca_system_score_gemma":0.0002545694,"threshold_uncertainty_score":0.008333027},"labels":[],"label_agreement":null},{"id":"W2915487859","doi":"10.1186/s13148-018-0596-7","title":"DNA methylation and histone post-translational modification stability in post-mortem brain tissue","year":2019,"lang":"en","type":"article","venue":"Clinical Epigenetics","topic":"Epigenetics and DNA Methylation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":37,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba","funders":"Canadian Institutes of Health Research; Canada Research Chairs","keywords":"Histone; Epigenetics; DNA methylation; Biology; Molecular biology; Methylation; Epigenomics; DNA; Biochemistry; Gene expression; Gene","score_opus":0.038606157630611836,"score_gpt":0.3813604821483384,"score_spread":0.3427543245177266,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2915487859","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9901787,0.003972973,0.0034429878,0.00005981318,0.000022812883,0.00002587976,0.0012916216,0.000042255066,0.00096295064],"genre_scores_gemma":[0.9930031,0.0013700356,0.002410651,0.000057544854,0.0000142013305,0.000057739453,0.0018587819,0.00001294945,0.0012149881],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99990225,0.000011086863,0.000008230293,0.000041524207,0.000020513322,0.00001639009],"domain_scores_gemma":[0.99973804,0.00004622139,0.000102544385,0.000021736665,0.000064278494,0.000027251459],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00030342405,0.00016421959,0.00015643843,0.00043968364,0.0001536689,0.00022677575,0.00019211609,0.00030625562,0.0014944304],"category_scores_gemma":[0.00039676443,0.00011902153,0.00018980427,0.0002762785,0.00023553184,0.00019476225,0.00010290774,0.00033858605,0.00032605912],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00055928814,0.00002250445,0.017982546,0.00010133887,0.00006885522,0.000110243214,0.00008887959,0.00008010534,0.9754685,0.00006364065,0.000094324256,0.005359678],"study_design_scores_gemma":[0.000014715384,0.0009798073,0.57827365,0.00003253493,0.00017323863,0.001163706,0.0001702921,0.0005292807,0.4151493,0.00023245091,0.0032594854,0.000021473372],"about_ca_topic_score_codex":0.0012307368,"about_ca_topic_score_gemma":0.0017725191,"teacher_disagreement_score":0.0014944304,"about_ca_system_score_codex":0.00027471516,"about_ca_system_score_gemma":0.00013318816,"threshold_uncertainty_score":0.004999399},"labels":[],"label_agreement":null},{"id":"W2918269253","doi":"10.1186/s13148-018-0599-4","title":"Analysis of two birth tissues provides new insights into the epigenetic landscape of neonates born preterm","year":2019,"lang":"en","type":"article","venue":"Clinical Epigenetics","topic":"Epigenetics and DNA Methylation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":36,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Child and Family Research Institute; University of British Columbia","funders":"National Medical Research Council; National Research Foundation; Ministry of Education - Singapore; Agency for Science, Technology and Research; Ministry of Education, India; Medical Research Council; Duke-NUS Medical School","keywords":"dNaM; Cord blood; Epigenetics; Medicine; Epigenome; Gestational age; Umbilical cord; Pregnancy; Premature birth; DNA methylation; Placenta; Gestation; Cohort study; Obstetrics; Bioinformatics; Pediatrics; Fetus; Biology; Genetics; Internal medicine; Immunology; Gene","score_opus":0.020550609165685393,"score_gpt":0.33328099595965605,"score_spread":0.31273038679397064,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2918269253","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9839324,0.003462556,0.008058893,0.00014493144,0.000023711316,0.000013508136,0.00235439,0.000056291206,0.001953355],"genre_scores_gemma":[0.9915079,0.0010454431,0.00494846,0.0001347909,0.00001998555,0.000026985446,0.0012935528,0.000026197427,0.0009967482],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9997632,0.00003936153,0.000018153947,0.000092073846,0.000061140636,0.000026082615],"domain_scores_gemma":[0.9995192,0.00013424944,0.00015523832,0.000071588984,0.00007563207,0.000044022498],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00044591073,0.00023458742,0.00033228987,0.00068798685,0.0002378971,0.00045706664,0.0003100079,0.00025959028,0.0018210029],"category_scores_gemma":[0.00093191024,0.00015134685,0.00026139137,0.0006612637,0.00023317563,0.00017091857,0.0006099127,0.00034890915,0.00026319615],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0004891144,0.00005002545,0.70600444,0.0003706363,0.0003309678,0.00063188875,0.0005144622,0.00036110877,0.2394627,0.00044107874,0.00046947817,0.05087414],"study_design_scores_gemma":[0.00000646673,0.00014173856,0.9728423,0.000031767588,0.00012493243,0.0014507315,0.00021971474,0.0005964617,0.021251732,0.0004609815,0.0028630404,0.00001008481],"about_ca_topic_score_codex":0.0019441304,"about_ca_topic_score_gemma":0.0041063395,"teacher_disagreement_score":0.0019441304,"about_ca_system_score_codex":0.00025343773,"about_ca_system_score_gemma":0.0002278818,"threshold_uncertainty_score":0.0060918927},"labels":[],"label_agreement":null},{"id":"W2941906331","doi":"10.1186/s13148-019-0651-z","title":"Exploring targets of TET2-mediated methylation reprogramming as potential discriminators of prostate cancer progression","year":2019,"lang":"en","type":"article","venue":"Clinical Epigenetics","topic":"Epigenetics and DNA Methylation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":44,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; University Health Network; Canada Research Chairs; Lunenfeld-Tanenbaum Research Institute; Mount Sinai Hospital","funders":"National Institute of General Medical Sciences; Prostate Cancer Canada; National Human Genome Research Institute; University of Toronto; Movember Foundation","keywords":"DNA methylation; Prostate cancer; Biology; Carcinogenesis; Cancer research; Methylation; Epigenetics; Transcriptome; Cancer; Chromoplexy; CpG site; Reprogramming; Epigenome; Gene; Genetics; PCA3; Gene expression","score_opus":0.06462673194673692,"score_gpt":0.3785133542151998,"score_spread":0.3138866222684629,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2941906331","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9826957,0.004090063,0.0037771496,0.00012305797,0.000018070148,0.000035873294,0.007000971,0.00015909824,0.0020999438],"genre_scores_gemma":[0.99175644,0.0007174625,0.0018673703,0.000063414125,0.000009843457,0.000041261334,0.0047341147,0.000024412306,0.00078569417],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998925,0.000010407169,0.0000052238192,0.000043522294,0.000030628304,0.000017766362],"domain_scores_gemma":[0.9998197,0.000053682506,0.00005756766,0.00001091468,0.00003163051,0.00002656714],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002463054,0.00026025862,0.0003748419,0.00060899026,0.000137922,0.00043277213,0.00019704105,0.00021490495,0.0016931786],"category_scores_gemma":[0.00032235967,0.000091070346,0.00023359619,0.00068906165,0.000120372235,0.00018137382,0.00022825472,0.00028735583,0.00027665863],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0016477471,0.000101265716,0.23760052,0.00093105435,0.0003602874,0.00016417872,0.00016760408,0.0031176172,0.69849604,0.0006696971,0.0011215563,0.055622354],"study_design_scores_gemma":[0.000065909735,0.00089303835,0.75680506,0.00008586476,0.0006136569,0.00076228357,0.0002744985,0.01545684,0.21218577,0.0012786213,0.011535942,0.000042510153],"about_ca_topic_score_codex":0.0012707115,"about_ca_topic_score_gemma":0.0025353152,"teacher_disagreement_score":0.0016931786,"about_ca_system_score_codex":0.00029344193,"about_ca_system_score_gemma":0.00023495879,"threshold_uncertainty_score":0.005664289},"labels":[],"label_agreement":null},{"id":"W2943557932","doi":"10.1186/s13148-019-0653-x","title":"Prenatal maternal antidepressants, anxiety, and depression and offspring DNA methylation: epigenome-wide associations at birth and persistence into early childhood","year":2019,"lang":"en","type":"article","venue":"Clinical Epigenetics","topic":"Maternal Mental Health During Pregnancy and Postpartum","field":"Medicine","cited_by":73,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"Eunice Kennedy Shriver National Institute of Child Health and Human Development; National Institute of Environmental Health Sciences; National Institute of Nursing Research; National Heart, Lung, and Blood Institute; National Institutes of Health; Nederlandse Organisatie voor Wetenschappelijk Onderzoek; Erasmus Medisch Centrum; Erasmus Universiteit Rotterdam; European Commission","keywords":"Pregnancy; Anxiety; Medicine; Offspring; Epigenome; DNA methylation; Depression (economics); Edinburgh Postnatal Depression Scale; Psychiatry; Obstetrics; Cord blood; Internal medicine; Biology; Genetics","score_opus":0.025648369425903397,"score_gpt":0.30955902658491874,"score_spread":0.28391065715901537,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2943557932","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99744594,0.0005855762,0.0003505348,0.000058036192,0.0000031334864,0.000005360209,0.0012938663,0.000007616344,0.0002499897],"genre_scores_gemma":[0.9981534,0.00030182838,0.0005052527,0.00003206773,0.000004308768,0.000014549513,0.00066508906,0.0000041388835,0.00031934626],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9997589,0.000047842852,0.000014882722,0.000107956694,0.000030289086,0.000040188945],"domain_scores_gemma":[0.9995555,0.000101326084,0.0001901073,0.000046993107,0.000038810096,0.000067256515],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00032800963,0.00019675381,0.00018482651,0.0002846908,0.0001966096,0.00034881136,0.00026568232,0.00035380403,0.0016567436],"category_scores_gemma":[0.0010199463,0.00018740442,0.00031872527,0.000472297,0.00012258209,0.0001749314,0.00037260304,0.00032238488,0.00011335646],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003864455,0.000026068803,0.98906565,0.000028610975,0.00025545617,0.00009731818,0.0001224923,0.00010159987,0.0049324757,0.000052133408,0.00015977549,0.004771985],"study_design_scores_gemma":[0.000004156874,0.00003569886,0.99926215,0.0000047558733,0.00004667626,0.00010803588,0.000019365369,0.00007422167,0.0002961602,0.000021879205,0.00012531305,0.0000015675295],"about_ca_topic_score_codex":0.006817979,"about_ca_topic_score_gemma":0.008542574,"teacher_disagreement_score":0.006817979,"about_ca_system_score_codex":0.0002389863,"about_ca_system_score_gemma":0.00019492889,"threshold_uncertainty_score":0.01355654},"labels":[],"label_agreement":null},{"id":"W2945394243","doi":"10.1186/s13148-019-0663-8","title":"Identification of a novel quinoline-based DNA demethylating compound highly potent in cancer cells","year":2019,"lang":"en","type":"article","venue":"Clinical Epigenetics","topic":"Epigenetics and DNA Methylation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":51,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Simon Fraser University","funders":"National Institute of General Medical Sciences; Deutsches Krebsforschungszentrum; Ministry of Science and ICT, South Korea; Action LIONS Vaincre le Cancer; Recherches Scientifiques Luxembourg; Associazione Italiana per la Ricerca sul Cancro; National Institutes of Health; Een Häerz fir kriibskrank Kanner; Istituto Pasteur-Fondazione Cenci Bolognetti; National Research Foundation of Korea; Seoul National University; National Research Foundation","keywords":"Demethylating agent; Cancer research; Decitabine; Cancer cell; Methyltransferase; Biology; Myeloid leukemia; Molecular biology; Cancer; DNA methylation; Chemistry; Methylation; Gene expression; Biochemistry; Genetics","score_opus":0.04612478277169015,"score_gpt":0.3620062570267339,"score_spread":0.31588147425504376,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2945394243","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9748702,0.009711495,0.009696082,0.00023709377,0.000050659197,0.00021718306,0.0009316168,0.00020810975,0.0040775007],"genre_scores_gemma":[0.9899492,0.0023125268,0.004283268,0.00009540897,0.000010503212,0.00004898327,0.00073479576,0.000011399661,0.0025538937],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99995315,0.000008095237,0.000003489403,0.000014209614,0.000010848958,0.000010218611],"domain_scores_gemma":[0.99994886,0.00000855598,0.0000109290695,0.000006503809,0.0000140035645,0.000011145816],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000104536506,0.00030170855,0.0001873621,0.00021744736,0.00009356211,0.00014110291,0.0002111414,0.00023458654,0.0013756499],"category_scores_gemma":[0.00008686658,0.00007727201,0.0001678631,0.00013449065,0.00009591747,0.00010423181,0.00011276501,0.00027261168,0.0003071756],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007216183,0.000031877742,0.00013135638,0.00007828553,0.0000071328027,0.000055855216,0.000009535792,0.00014951553,0.9957072,0.00009120545,0.000080593374,0.003585253],"study_design_scores_gemma":[0.00004276916,0.0011110904,0.0019105875,0.000009803817,0.000032349995,0.00034942344,0.000010391202,0.0006067143,0.99089324,0.00003164787,0.0049958816,0.0000060868474],"about_ca_topic_score_codex":0.0007107482,"about_ca_topic_score_gemma":0.0009934978,"teacher_disagreement_score":0.0013756499,"about_ca_system_score_codex":0.00015844588,"about_ca_system_score_gemma":0.00010985467,"threshold_uncertainty_score":0.004602015},"labels":[],"label_agreement":null},{"id":"W2947363345","doi":"10.1186/s13148-019-0658-5","title":"Gene domain-specific DNA methylation episignatures highlight distinct molecular entities of ADNP syndrome","year":2019,"lang":"en","type":"article","venue":"Clinical Epigenetics","topic":"Connective tissue disorders research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":128,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Victoria Hospital; London Health Sciences Centre; Western University","funders":"Eunice Kennedy Shriver National Institute of Child Health and Human Development; Children's Health Foundation; McMaster University; Children's Health Research Institute","keywords":"Genetics; Biology; DNA methylation; Gene; Human genetics; OMIM : Online Mendelian Inheritance in Man; Chromatin; Methylation; Bioinformatics; Gene expression; Phenotype","score_opus":0.022698803026824036,"score_gpt":0.3296962994632304,"score_spread":0.3069974964364064,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2947363345","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9954249,0.00016163717,0.003835008,0.00003216025,0.0000022750432,0.000013999455,0.0001406745,0.000045869496,0.00034344263],"genre_scores_gemma":[0.9983966,0.00002777231,0.0013321921,0.000008477349,0.000002490376,0.0000069778807,0.00017233263,0.0000035208325,0.000049648177],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.999846,0.000023451827,0.000012713092,0.00006724956,0.000027520024,0.000022993228],"domain_scores_gemma":[0.9995179,0.00025407562,0.00010349819,0.00002769178,0.00004043542,0.00005641004],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00032140224,0.0003824574,0.0002089072,0.00080511405,0.00014038866,0.00036835164,0.00019806746,0.0002995341,0.0008802287],"category_scores_gemma":[0.0013752615,0.000097475204,0.0002605039,0.00030658604,0.00027286494,0.00014562951,0.00044512315,0.000289623,0.000104885374],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0011078609,0.0000631303,0.896604,0.0000603226,0.00013665657,0.0013548615,0.00018065421,0.0098209465,0.06319694,0.0006096132,0.0002089228,0.026656074],"study_design_scores_gemma":[0.00009967517,0.00042487026,0.7327137,0.00003458553,0.00026409252,0.0061787134,0.0002789305,0.22416574,0.029667934,0.0047340514,0.0013967196,0.000041055788],"about_ca_topic_score_codex":0.0010597262,"about_ca_topic_score_gemma":0.0012338315,"teacher_disagreement_score":0.0010597262,"about_ca_system_score_codex":0.0002533027,"about_ca_system_score_gemma":0.0001619911,"threshold_uncertainty_score":0.0029447079},"labels":[],"label_agreement":null},{"id":"W2947973160","doi":"10.1186/s13148-019-0682-5","title":"Identification of dynamic glucocorticoid-induced methylation changes at the FKBP5 locus","year":2019,"lang":"en","type":"article","venue":"Clinical Epigenetics","topic":"Epigenetics and DNA Methylation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":89,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"BC Children's Hospital; Simon Fraser University","funders":"European Research Council; Canadian Institutes of Health Research; Bundesministerium für Bildung und Forschung","keywords":"dNaM; FKBP5; DNA methylation; Glucocorticoid receptor; Epigenetics; Methylation; Locus (genetics); Biology; SNP; Differentially methylated regions; Bisulfite sequencing; In silico; Genetics; Glucocorticoid; Internal medicine; Endocrinology; Medicine; Genotype; Gene; Single-nucleotide polymorphism; Gene expression","score_opus":0.026314801769892888,"score_gpt":0.35064054071879147,"score_spread":0.3243257389488986,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2947973160","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9909724,0.0016489621,0.0050848,0.000096147836,0.000020468871,0.00001824074,0.0015038892,0.000070617636,0.00058458024],"genre_scores_gemma":[0.9971891,0.00020366994,0.0013653107,0.000046063335,0.000008078482,0.000016771904,0.0006389859,0.000010887926,0.00052098645],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99985206,0.000016240352,0.000007808618,0.0000709204,0.000026790807,0.000026038455],"domain_scores_gemma":[0.9998017,0.00003954033,0.0000756634,0.000024746045,0.000031832293,0.000026504638],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00017774497,0.00020191197,0.0002216853,0.00025180785,0.00016153455,0.00020067766,0.0001692522,0.00023407312,0.0018524968],"category_scores_gemma":[0.0003823814,0.00011083914,0.00019393669,0.00018978001,0.00018913962,0.00007278996,0.00021597598,0.00027053512,0.00022883459],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005827954,0.000018959141,0.059524,0.00011676184,0.00010670444,0.0001276256,0.00015159223,0.00021769531,0.92752784,0.000100436955,0.00018677326,0.011338899],"study_design_scores_gemma":[0.0000129942755,0.00023939903,0.8642532,0.000021215697,0.00009523353,0.000654847,0.00010216979,0.0007362756,0.13165645,0.00022472008,0.0019867567,0.000016684757],"about_ca_topic_score_codex":0.0031974246,"about_ca_topic_score_gemma":0.0046828203,"teacher_disagreement_score":0.0031974246,"about_ca_system_score_codex":0.00029123898,"about_ca_system_score_gemma":0.00017701433,"threshold_uncertainty_score":0.00635767},"labels":[],"label_agreement":null},{"id":"W2952127660","doi":"10.1186/s13148-017-0411-x","title":"A multicenter, randomized study of decitabine as epigenetic priming with induction chemotherapy in children with AML","year":2017,"lang":"en","type":"article","venue":"Clinical Epigenetics","topic":"Acute Myeloid Leukemia Research","field":"Medicine","cited_by":45,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Alberta Children's Hospital; University of Calgary","funders":"Eisai; National Cancer Institute; National Institutes of Health; Translational Genomics Research Institute; Morgan Adams Foundation; Johns Hopkins University; Children's Hospital Colorado; St. Baldrick's Foundation; Arkansas Biosciences Institute; University of Arizona; Alex's Lemonade Stand Foundation for Childhood Cancer","keywords":"Decitabine; Medicine; Induction chemotherapy; Internal medicine; Oncology; Neutropenia; Azacitidine; Cytarabine; Tolerability; Gastroenterology; Chemotherapy; Adverse effect; DNA methylation; Biology","score_opus":0.047210476310517564,"score_gpt":0.3975289006784662,"score_spread":0.35031842436794863,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2952127660","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9936526,0.0013014395,0.0003941885,0.00043309532,0.00017022953,0.0030925905,0.00045589378,0.000042669908,0.00045723352],"genre_scores_gemma":[0.987822,0.0010394838,0.0026026843,0.00081413233,0.0002895796,0.005572325,0.00081307435,0.000020107362,0.0010266668],"study_design_codex":"randomized_trial","study_design_gemma":"randomized_trial","domain_scores_codex":[0.9985343,0.0009321054,0.0000968879,0.00019502509,0.000096328666,0.00014531288],"domain_scores_gemma":[0.9976367,0.0004113397,0.0007753967,0.00024282285,0.00013477184,0.0007989713],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0030116318,0.001211962,0.0021277454,0.0003070614,0.0004175183,0.0008390501,0.00085673045,0.0011974376,0.004137334],"category_scores_gemma":[0.0027308632,0.0006340306,0.0013447911,0.0004079309,0.0010821631,0.00083079,0.00059841434,0.0027631382,0.0004719743],"study_design_candidate":"randomized_trial","study_design_consensus":"randomized_trial","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.96599966,0.013357785,0.002912671,0.00021158771,0.0005484839,0.000056733938,0.00007318024,0.00031784258,0.0033675674,0.0001251678,0.0005400274,0.012489332],"study_design_scores_gemma":[0.80315584,0.18958417,0.0048035886,0.000028643188,0.00033984263,0.00008760653,0.000028491495,0.0003137849,0.00066892407,0.00008940678,0.0008856854,0.0000138736805],"about_ca_topic_score_codex":0.0008147241,"about_ca_topic_score_gemma":0.00170167,"teacher_disagreement_score":0.004137334,"about_ca_system_score_codex":0.0011651214,"about_ca_system_score_gemma":0.0027044215,"threshold_uncertainty_score":0.015927196},"labels":[],"label_agreement":null},{"id":"W2957019321","doi":"10.1186/s13148-019-0684-3","title":"Functional DNA methylation signatures for autism spectrum disorder genomic risk loci: 16p11.2 deletions and CHD8 variants","year":2019,"lang":"en","type":"article","venue":"Clinical Epigenetics","topic":"Autism Spectrum Disorder Research","field":"Neuroscience","cited_by":77,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Holland Bloorview Kids Rehabilitation Hospital; Centre for Addiction and Mental Health; McMaster University; Western University; Children's Hospital of Eastern Ontario; University of Alberta; SickKids Foundation; University of Toronto; Hospital for Sick Children","funders":"Hospital for Sick Children; Centre for Applied Genomics; Government of Ontario; Canadian Institutes of Health Research; Genome Canada; Ontario Genomics; Rare Disease Foundation; Ontario Brain Institute; University of Toronto; GlaxoSmithKline","keywords":"dNaM; Epigenetics; DNA methylation; Genetics; Biology; Autism spectrum disorder; Epigenome; Human genetics; Gene; Copy-number variation; Autism; Bioinformatics; Genome; Medicine; Gene expression","score_opus":0.05174583356869899,"score_gpt":0.34481650687595744,"score_spread":0.29307067330725844,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2957019321","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99719524,0.00032597352,0.00087548833,0.00002442669,0.0000032781281,0.000008932777,0.0010768911,0.000025151177,0.00046458843],"genre_scores_gemma":[0.9982229,0.0000623714,0.0007773703,0.000018452552,0.0000024928815,0.000016071166,0.0006347804,0.000006223429,0.00025924144],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9998292,0.000023124872,0.000014598368,0.00008090741,0.000028672912,0.000023540548],"domain_scores_gemma":[0.9997991,0.000054769152,0.000073374395,0.00001783731,0.000025566806,0.000029296109],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00018171327,0.0002166845,0.00020923492,0.00084034103,0.00015445084,0.00020767529,0.00014915857,0.00026709342,0.0015331301],"category_scores_gemma":[0.00062547455,0.00013186909,0.00016670427,0.00036591204,0.00013972771,0.00008559542,0.00028587584,0.00018717139,0.00014854386],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00082118076,0.000028883875,0.50062174,0.000095234056,0.00019231453,0.00032228636,0.0003858274,0.00029938677,0.484175,0.00013104116,0.00024722648,0.012679829],"study_design_scores_gemma":[0.000018123295,0.00008603853,0.9761066,0.0000061460505,0.00006366788,0.001238261,0.000079365214,0.0007568504,0.020994771,0.00016788705,0.00047452436,0.000007846792],"about_ca_topic_score_codex":0.0017311564,"about_ca_topic_score_gemma":0.0032102955,"teacher_disagreement_score":0.0017311564,"about_ca_system_score_codex":0.00015399349,"about_ca_system_score_gemma":0.00008182993,"threshold_uncertainty_score":0.005128801},"labels":[],"label_agreement":null},{"id":"W2960426719","doi":"10.1186/s13148-019-0696-z","title":"Apabetalone (RVX-208) reduces vascular inflammation in vitro and in CVD patients by a BET-dependent epigenetic mechanism","year":2019,"lang":"en","type":"article","venue":"Clinical Epigenetics","topic":"Protein Degradation and Inhibitors","field":"Biochemistry, Genetics and Molecular Biology","cited_by":126,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Libin Cardiovascular Institute of Alberta; University of Calgary; Resverlogix (Canada)","funders":"","keywords":"Bromodomain; Inflammation; Mace; Epigenetics; Cell adhesion molecule; Medicine; BRD4; Endothelium; Cell adhesion; Soluble cell adhesion molecules; Immunology; Monocyte; Internal medicine; Endocrinology; Cancer research; Biology; Biochemistry; Cell; Myocardial infarction","score_opus":0.00818863877657125,"score_gpt":0.2606006899581474,"score_spread":0.25241205118157617,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2960426719","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9942227,0.0036754662,0.00062942714,0.0001237344,0.00005957793,0.000035271092,0.0003324182,0.000050945127,0.0008704416],"genre_scores_gemma":[0.99616915,0.0013731185,0.0006244243,0.000119246964,0.000024395738,0.000029417113,0.0004314679,0.0000051206616,0.001223574],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999275,0.00001733386,0.0000060799894,0.000015261901,0.000016138794,0.000017708438],"domain_scores_gemma":[0.99994516,0.000009592996,0.00001690145,0.0000053891126,0.0000064528213,0.000016467095],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013367686,0.00023879431,0.00026387657,0.00015683901,0.00012393667,0.00021743805,0.00014230491,0.00018097805,0.0021884304],"category_scores_gemma":[0.000121337376,0.00009631774,0.0002202289,0.00010984661,0.00013380554,0.00009844576,0.0001224488,0.0005997899,0.00028393237],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0031018562,0.00051796716,0.0013321764,0.00014046418,0.00004629968,0.000051914834,0.000025483618,0.00012264564,0.9797178,0.000042452713,0.00020167248,0.014699346],"study_design_scores_gemma":[0.0016155652,0.030365791,0.07499266,0.000047122776,0.0003001123,0.0008101472,0.00013996518,0.0015602903,0.8816096,0.00018071347,0.008353317,0.000024777952],"about_ca_topic_score_codex":0.00026725366,"about_ca_topic_score_gemma":0.0005496088,"teacher_disagreement_score":0.0021884304,"about_ca_system_score_codex":0.00012871137,"about_ca_system_score_gemma":0.00011430906,"threshold_uncertainty_score":0.0073210597},"labels":[],"label_agreement":null},{"id":"W2966498474","doi":"10.1186/s13148-019-0699-9","title":"Rheumatoid arthritis-relevant DNA methylation changes identified in ACPA-positive asymptomatic individuals using methylome capture sequencing","year":2019,"lang":"en","type":"article","venue":"Clinical Epigenetics","topic":"Rheumatoid Arthritis Research and Therapies","field":"Medicine","cited_by":27,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Ontario Institute for Cancer Research; University of Calgary; McGill University; National Research Council Canada; Jewish General Hospital; McGill University and Génome Québec Innovation Centre","funders":"Canadian Institutes of Health Research; Office of the Assistant Secretary for Health; McGill University; U.S. Department of Defense","keywords":"DNA methylation; Differentially methylated regions; Biology; Immunology; CpG site; Methylation; Epigenetics; Population; Genetics; Medicine; Gene; Gene expression","score_opus":0.05258881114504281,"score_gpt":0.359684252372437,"score_spread":0.3070954412273942,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2966498474","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9988795,0.0002138165,0.0004514958,0.000012013633,0.0000017238309,0.000008145119,0.00026166832,0.0000093393965,0.0001624717],"genre_scores_gemma":[0.99903536,0.00006650396,0.0004897304,0.00002056473,0.000003899068,0.000011580453,0.00020945758,0.0000021312057,0.0001607395],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9998023,0.000034453256,0.000013182664,0.00009287683,0.000035409215,0.000021816482],"domain_scores_gemma":[0.9997956,0.00006390579,0.00006942367,0.000017724398,0.00002491214,0.000028490444],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00026741702,0.00019208057,0.00020248881,0.0005771784,0.00016664356,0.00021100696,0.00014487412,0.0003018671,0.0012387235],"category_scores_gemma":[0.00079904316,0.00010438908,0.0001434046,0.0003556437,0.0001603512,0.000071319584,0.00017634468,0.00014560466,0.00014999093],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0009902957,0.0000525087,0.7954018,0.000079630336,0.00019508885,0.00030536565,0.00024722388,0.00027214244,0.19039783,0.000052648193,0.00018266615,0.011822856],"study_design_scores_gemma":[0.000027601283,0.00040925044,0.9882224,0.000009289409,0.00008891401,0.0012107952,0.00007221733,0.00079623144,0.008660808,0.00005316949,0.00044398618,0.000005334677],"about_ca_topic_score_codex":0.0015544774,"about_ca_topic_score_gemma":0.0022044154,"teacher_disagreement_score":0.0015544774,"about_ca_system_score_codex":0.00011173553,"about_ca_system_score_gemma":0.0000945751,"threshold_uncertainty_score":0.0041439533},"labels":[],"label_agreement":null},{"id":"W2967149621","doi":"10.1186/s13148-019-0708-z","title":"DNA methylation signature is prognostic of choroid plexus tumor aggressiveness","year":2019,"lang":"en","type":"article","venue":"Clinical Epigenetics","topic":"Glioma Diagnosis and Treatment","field":"Medicine","cited_by":48,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University Health Centre; Princess Margaret Cancer Centre; Montreal Children's Hospital; SickKids Foundation; University of Toronto; Hospital for Sick Children","funders":"Canadian Institutes of Health Research; Brain Tumour Charity; Cancer Research UK; Ontario Genomics; Genome Canada","keywords":"dNaM; Choroid plexus papilloma; DNA methylation; Choroid plexus; Epigenetics; Medicine; Biology; Bioinformatics; Pathology; Oncology; Internal medicine; Genetics; Gene","score_opus":0.03530230870936922,"score_gpt":0.3567208028945009,"score_spread":0.3214184941851317,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2967149621","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99534,0.0011626534,0.0011525999,0.00010176423,0.000010377051,0.000014036334,0.0013505183,0.000047114732,0.0008209941],"genre_scores_gemma":[0.9982659,0.00029499352,0.0006294914,0.000025254003,0.000007322532,0.000010782749,0.00055815664,0.000008185578,0.00019992075],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99981815,0.000029196593,0.000016656386,0.0000687909,0.000039436138,0.000027794673],"domain_scores_gemma":[0.9993963,0.0001481858,0.0002520329,0.000038151346,0.00007950058,0.00008585952],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00029338148,0.0002422765,0.0002622118,0.000701857,0.00018439419,0.00039502556,0.00015551767,0.000280779,0.0014956176],"category_scores_gemma":[0.0013917722,0.00015397822,0.00019364142,0.00057957525,0.00020245732,0.00015203332,0.000239587,0.0003311034,0.00026951614],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00078666775,0.00002258847,0.89905477,0.00008973448,0.00021297116,0.00022869618,0.00009894686,0.00071963196,0.080329694,0.00007268674,0.00042610746,0.017957525],"study_design_scores_gemma":[0.000012637556,0.000121620054,0.98189515,0.000018330808,0.00013628387,0.0009441076,0.000065942935,0.0022926878,0.013202034,0.00024833617,0.0010513776,0.000011599782],"about_ca_topic_score_codex":0.0026341446,"about_ca_topic_score_gemma":0.003180554,"teacher_disagreement_score":0.0026341446,"about_ca_system_score_codex":0.00036009465,"about_ca_system_score_gemma":0.00023941301,"threshold_uncertainty_score":0.0052376986},"labels":[],"label_agreement":null},{"id":"W2970502399","doi":"10.1186/s13148-019-0717-y","title":"Systematic evaluation and validation of reference and library selection methods for deconvolution of cord blood DNA methylation data","year":2019,"lang":"en","type":"article","venue":"Clinical Epigenetics","topic":"Epigenetics and DNA Methylation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":234,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba; Children's Hospital Research Institute of Manitoba; BC Children's Hospital; University of British Columbia","funders":"H2020 European Research Council; National Institute on Minority Health and Health Disparities; National Institute of Environmental Health Sciences; National Institute of General Medical Sciences; National Institute on Aging; National Cancer Institute; National Institutes of Health; Erasmus Medisch Centrum; Joint Programming Initiative A healthy diet for a healthy life; Erasmus Universiteit Rotterdam; ZonMw","keywords":"dNaM; Deconvolution; DNA methylation; Computer science; Leverage (statistics); Computational biology; Data mining; Biology; Algorithm; Artificial intelligence; Genetics","score_opus":0.11891556735360609,"score_gpt":0.4546637391315752,"score_spread":0.3357481717779691,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2970502399","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.31568924,0.022453593,0.63592696,0.0008750681,0.00042456135,0.003199197,0.012009345,0.00606944,0.0033525839],"genre_scores_gemma":[0.336668,0.0034104828,0.6221608,0.00080130494,0.00013546641,0.003869191,0.029457375,0.0023058013,0.0011916157],"study_design_codex":"design_other","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9420146,0.030218124,0.0056601153,0.008993995,0.012459768,0.0006533624],"domain_scores_gemma":[0.8838298,0.055912852,0.008214639,0.017825281,0.03319222,0.0010251865],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.11241029,0.002302498,0.0020886988,0.00525843,0.0017281282,0.0031687745,0.003642704,0.0021747458,0.0015731915],"category_scores_gemma":[0.1722804,0.0008644332,0.003756461,0.0040590405,0.0021960698,0.0013432231,0.004433721,0.0014130063,0.0011151519],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.006594645,0.001088229,0.21783096,0.015036342,0.01770304,0.00065421173,0.0031275235,0.05762521,0.098087505,0.008650709,0.017064743,0.55653685],"study_design_scores_gemma":[0.001895943,0.005819523,0.25059333,0.005551529,0.017542774,0.0032457141,0.0011814445,0.19355838,0.40882722,0.013057583,0.097474314,0.0012523318],"about_ca_topic_score_codex":0.004150414,"about_ca_topic_score_gemma":0.0056901495,"teacher_disagreement_score":0.11241029,"about_ca_system_score_codex":0.0017942846,"about_ca_system_score_gemma":0.005886934,"threshold_uncertainty_score":0.5944896},"labels":[],"label_agreement":null},{"id":"W2971578437","doi":"10.1186/s13148-019-0713-2","title":"Air pollution and DNA methylation: effects of exposure in humans","year":2019,"lang":"en","type":"review","venue":"Clinical Epigenetics","topic":"Air Quality and Health Impacts","field":"Environmental Science","cited_by":361,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Stornoway Diamond (Canada); University of British Columbia; University of British Columbia Hospital","funders":"Canadian Institutes of Health Research; Mitacs; Canada Research Chairs; Institute of Circulatory and Respiratory Health; Michael Smith Health Research BC; Canada Excellence Research Chairs, Government of Canada; British Columbia Lung Association","keywords":"dNaM; Environmental health; Air pollution; Medicine; Asthma; DNA methylation; Immunology; Biology; Ecology; Genetics","score_opus":0.15969190950455744,"score_gpt":0.4507814631193121,"score_spread":0.29108955361475464,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2971578437","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0066812523,0.9790699,0.002213412,0.004959411,0.0008074599,0.000021780925,0.0006204705,0.00007270806,0.0055535855],"genre_scores_gemma":[0.080077745,0.90648,0.0024114738,0.0021329843,0.0013332786,0.000079596124,0.00063803396,0.000023174664,0.006823581],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99961805,0.00014129066,0.000027489177,0.00010249112,0.00008329426,0.000027329359],"domain_scores_gemma":[0.9997663,0.00007302624,0.000063141226,0.000011783353,0.000059177488,0.000026559388],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00049189344,0.00032295214,0.00050854584,0.00048746713,0.00029949268,0.0007520116,0.00032367985,0.00070847134,0.0028156464],"category_scores_gemma":[0.00077548897,0.0001537879,0.00035220737,0.00081198115,0.00046021727,0.00044750716,0.00068491895,0.0009239197,0.00069095916],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00041653155,0.000109957204,0.013505981,0.014301741,0.0007319474,0.00038509647,0.00075481756,0.00070029724,0.024381746,0.01019961,0.037772514,0.8967397],"study_design_scores_gemma":[0.000042797987,0.0004574811,0.05048102,0.003456964,0.0005038374,0.0018214106,0.00046038683,0.00049966585,0.0106124785,0.013859859,0.91773707,0.00006696816],"about_ca_topic_score_codex":0.0028760934,"about_ca_topic_score_gemma":0.0035819856,"teacher_disagreement_score":0.0028760934,"about_ca_system_score_codex":0.00042272502,"about_ca_system_score_gemma":0.0007802957,"threshold_uncertainty_score":0.009419262},"labels":[],"label_agreement":null},{"id":"W2981201235","doi":"10.1186/s13148-019-0737-7","title":"Correction to: DNA methylation signature is prognostic of choroid plexus tumor aggressiveness","year":2019,"lang":"en","type":"erratum","venue":"Clinical Epigenetics","topic":"Glioma Diagnosis and Treatment","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University Health Centre; Princess Margaret Cancer Centre; Montreal Children's Hospital; SickKids Foundation; University of Toronto; Hospital for Sick Children","funders":"Brain Tumour Charity; Cancer Research UK","keywords":"DNA methylation; Signature (topology); Human genetics; Methylation; Medicine; Gynecology; Bioinformatics; Internal medicine; Biology; Genetics; DNA; Mathematics; Gene","score_opus":0.03732130572124151,"score_gpt":0.3635484606663918,"score_spread":0.3262271549451503,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2981201235","genre_codex":"editorial","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0002172798,0.00096975325,0.0007148658,0.070958905,0.9234596,0.000022128852,0.0012517107,0.00031075018,0.0020950618],"genre_scores_gemma":[0.017699104,0.00970385,0.0060589956,0.13543248,0.58916986,0.00019427766,0.0047506783,0.0018760962,0.23511468],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99741554,0.0004326076,0.00048894936,0.00041289354,0.0009822642,0.00026780082],"domain_scores_gemma":[0.98075795,0.005869652,0.00088159845,0.0008568238,0.010497449,0.0011365943],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0029716385,0.0021434175,0.0017107445,0.0029726517,0.0021597964,0.003036465,0.0026842004,0.005275045,0.055371676],"category_scores_gemma":[0.045071084,0.00084144244,0.0016096146,0.0016493112,0.0015308828,0.0015897577,0.001424494,0.009194301,0.025241414],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00005789363,0.000005018001,0.00011211494,0.00009641308,0.000014657066,0.00034342246,0.00002319977,0.000036014982,0.000073546136,0.00039618165,0.99289906,0.005942569],"study_design_scores_gemma":[0.000112856935,0.000047251528,0.0014111801,0.0005304593,0.00010491041,0.0021648558,0.000103910796,0.0004649823,0.0005490997,0.0018833014,0.99255896,0.00006823051],"about_ca_topic_score_codex":0.0147187635,"about_ca_topic_score_gemma":0.01684963,"teacher_disagreement_score":0.055371676,"about_ca_system_score_codex":0.002647247,"about_ca_system_score_gemma":0.0044819056,"threshold_uncertainty_score":0.18523669},"labels":[],"label_agreement":null},{"id":"W2986189881","doi":"10.1186/s13148-019-0749-3","title":"A genome-wide DNA methylation signature for SETD1B-related syndrome","year":2019,"lang":"en","type":"article","venue":"Clinical Epigenetics","topic":"Genetics and Neurodevelopmental Disorders","field":"Biochemistry, Genetics and Molecular Biology","cited_by":67,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Children's & Women's Health Centre of British Columbia; University of British Columbia; Western University","funders":"","keywords":"Epigenetics; Genetics; Biology; DNA methylation; Human genetics; Gene; Histone; Histone methyltransferase; Missense mutation; Chromatin; Methyltransferase; Computational biology; Methylation; Gene expression; Mutation","score_opus":0.01778535818405212,"score_gpt":0.29559013670869844,"score_spread":0.2778047785246463,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2986189881","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9967782,0.00023772739,0.0014694949,0.00010716429,0.00001019501,0.000023499217,0.00041399073,0.000047143498,0.0009125337],"genre_scores_gemma":[0.99860793,0.00009373754,0.00071494014,0.0000403479,0.000004421027,0.00000810328,0.00019347756,0.000009352177,0.00032772453],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99986637,0.000012711363,0.000013918666,0.00004878813,0.000039492465,0.000018736113],"domain_scores_gemma":[0.99983096,0.000047835896,0.000037019152,0.000011763612,0.000017536291,0.000054829434],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00010239638,0.00039350038,0.00021571935,0.00084568537,0.000285787,0.0002377214,0.0002466953,0.00047512638,0.0020443383],"category_scores_gemma":[0.00058557314,0.000101708945,0.00018256548,0.00030857508,0.0002502915,0.00010158168,0.00038195078,0.00030801192,0.00017351337],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00046718965,0.00007556615,0.23192503,0.00010555077,0.00008343433,0.057833955,0.00080456055,0.00054916466,0.6845839,0.00054624246,0.0004995525,0.02252584],"study_design_scores_gemma":[0.000039678063,0.00042709924,0.60445666,0.00002641932,0.00012351721,0.28777388,0.0003607362,0.0027386418,0.100534804,0.00041138026,0.00307131,0.00003591746],"about_ca_topic_score_codex":0.001382453,"about_ca_topic_score_gemma":0.0015401776,"teacher_disagreement_score":0.0020443383,"about_ca_system_score_codex":0.00017527565,"about_ca_system_score_gemma":0.00013488083,"threshold_uncertainty_score":0.006839037},"labels":[],"label_agreement":null},{"id":"W2987719229","doi":"10.1186/s13148-019-0750-x","title":"Region-specific glucocorticoid receptor promoter methylation has both positive and negative prognostic value in patients with estrogen receptor-positive breast cancer","year":2019,"lang":"en","type":"article","venue":"Clinical Epigenetics","topic":"Estrogen and related hormone effects","field":"Biochemistry, Genetics and Molecular Biology","cited_by":17,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Queen's University","funders":"Queen's University; Canadian Institutes of Health Research; Terry Fox Foundation","keywords":"Glucocorticoid receptor; Breast cancer; Human genetics; Estrogen receptor; Oestrogen receptor; Estrogen; Methylation; Cancer; Internal medicine; Medicine; Receptor; Cancer research; Oncology; DNA methylation; Biology; Endocrinology; Gene; Genetics; Gene expression","score_opus":0.011239592378739588,"score_gpt":0.25974175818692624,"score_spread":0.24850216580818665,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2987719229","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99799347,0.0013706438,0.00008859346,0.000080816564,0.000007685979,0.0000045018846,0.00023126318,0.000008219778,0.00021471693],"genre_scores_gemma":[0.9994381,0.00016411404,0.00009495954,0.00001804267,0.000014082557,0.0000035325954,0.0001989406,0.000001395695,0.00006678187],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9998166,0.000058460435,0.000017159511,0.000045061643,0.000039446382,0.000023339759],"domain_scores_gemma":[0.999092,0.00030977218,0.0003187157,0.00005813435,0.000087703935,0.00013371966],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004711546,0.0001991645,0.0003433237,0.00047655925,0.00017227531,0.00024204561,0.00022399481,0.00030784402,0.0010825405],"category_scores_gemma":[0.0016022552,0.00009496687,0.00020369307,0.00044404733,0.00018470037,0.00013567414,0.00019815982,0.00032456827,0.00017419437],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.001262254,0.00002123641,0.9882902,0.000021852971,0.00009049473,0.00005934489,0.000028196255,0.00011031692,0.0034677852,0.0000085461,0.00015619438,0.006483608],"study_design_scores_gemma":[0.00002086383,0.00019002416,0.99806887,0.000005008494,0.00009250948,0.0003187615,0.000024882589,0.00036849864,0.00062479643,0.000026799144,0.00025530317,0.00000373978],"about_ca_topic_score_codex":0.0013197542,"about_ca_topic_score_gemma":0.0025020717,"teacher_disagreement_score":0.0013197542,"about_ca_system_score_codex":0.00022881168,"about_ca_system_score_gemma":0.00017277259,"threshold_uncertainty_score":0.003621459},"labels":[],"label_agreement":null},{"id":"W2990076559","doi":"10.1186/s13148-019-0754-6","title":"Body mass index is associated with epigenetic age acceleration in the visceral adipose tissue of subjects with severe obesity","year":2019,"lang":"en","type":"article","venue":"Clinical Epigenetics","topic":"Epigenetics and DNA Methylation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":66,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"Fonds de Recherche du Québec - Santé; Institut universitaire de cardiologie et de pneumologie de Québec, Université Laval; Canada Research Chairs; Heart and Stroke Foundation of Canada","keywords":"Body mass index; Adipose tissue; Obesity; Epigenetics; Medicine; Human genetics; Sports medicine; Physiology; Internal medicine; Bioinformatics; Endocrinology; Biology; Pathology; Genetics; Gene","score_opus":0.02210726225735483,"score_gpt":0.3076489336054764,"score_spread":0.2855416713481216,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2990076559","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9988582,0.00047717654,0.00019585283,0.000040362556,0.000010541348,0.0000043058644,0.00010868683,0.0000054208735,0.0002993362],"genre_scores_gemma":[0.9995034,0.000101096964,0.00010869098,0.000013730664,0.000012723797,0.0000035458415,0.00011112641,0.000001670945,0.00014389979],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99988544,0.00003057509,0.000012734488,0.000034461416,0.000018351433,0.000018376635],"domain_scores_gemma":[0.99929774,0.000113117814,0.0003716947,0.0000484591,0.000055888966,0.00011309742],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003432447,0.0002517322,0.00021503714,0.00050505635,0.00018389519,0.00032505224,0.00012687367,0.00031249155,0.0016822915],"category_scores_gemma":[0.0011724337,0.00015757458,0.00031764654,0.00047000963,0.00019606877,0.000202221,0.0002749114,0.00045065227,0.00014791799],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00024635866,0.000017810065,0.99704933,0.000011027043,0.000052500127,0.00005724136,0.000028855457,0.000029246146,0.00083337247,0.000017527074,0.000038123908,0.0016185734],"study_design_scores_gemma":[0.0000018656777,0.000061558916,0.99956983,0.0000022928934,0.000020705866,0.00011733289,0.000024102059,0.000090938884,0.000044202472,0.00001729949,0.000048731672,0.0000012128891],"about_ca_topic_score_codex":0.0010390383,"about_ca_topic_score_gemma":0.0012360964,"teacher_disagreement_score":0.0016822915,"about_ca_system_score_codex":0.000087469125,"about_ca_system_score_gemma":0.000119371165,"threshold_uncertainty_score":0.005627811},"labels":[],"label_agreement":null},{"id":"W2993489868","doi":"10.1186/s13148-019-0766-2","title":"The central nervous system tumor methylation classifier changes neuro-oncology practice for challenging brain tumor diagnoses and directly impacts patient care","year":2019,"lang":"en","type":"article","venue":"Clinical Epigenetics","topic":"Glioma Diagnosis and Treatment","field":"Medicine","cited_by":89,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"St. Michael's Hospital; University of Toronto; University Health Network; Princess Margaret Cancer Centre","funders":"Brain Tumour Charity","keywords":"Brain tumor; Medicine; Medical diagnosis; Neurology; Central nervous system; Human genetics; Oncology; Patient care; Internal medicine; Bioinformatics; Intensive care medicine; Pathology; Biology; Psychiatry; Nursing","score_opus":0.03788344725762592,"score_gpt":0.3600271935792914,"score_spread":0.3221437463216655,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2993489868","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9836488,0.0011451547,0.004898099,0.004402657,0.00008476136,0.000098851044,0.0002178793,0.00021313089,0.005290664],"genre_scores_gemma":[0.98913634,0.0004268433,0.009428786,0.00039022462,0.000046063724,0.000021926564,0.000112559195,0.000028588798,0.00040861915],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99766433,0.0007893659,0.00026385157,0.00034800818,0.00078071957,0.00015376801],"domain_scores_gemma":[0.9937751,0.0016817793,0.0022546605,0.00028623105,0.0012516982,0.0007504115],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.003408215,0.00022800134,0.00025866157,0.00083225186,0.000608078,0.0013052318,0.00066966406,0.00045315633,0.0018187056],"category_scores_gemma":[0.013160965,0.00011095113,0.00020194317,0.0005936773,0.00043545538,0.00063910644,0.0010914806,0.000552017,0.0006288886],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015607919,0.00014931365,0.79483575,0.00010159531,0.000055752622,0.0010957868,0.0010477281,0.0010844611,0.0055113784,0.00019239435,0.0036376314,0.19213216],"study_design_scores_gemma":[0.000030398072,0.0009137555,0.93085116,0.0003615659,0.00018138775,0.013202112,0.0041693444,0.01624938,0.015531045,0.0013076867,0.01712902,0.00007313918],"about_ca_topic_score_codex":0.0026098385,"about_ca_topic_score_gemma":0.006662557,"teacher_disagreement_score":0.003408215,"about_ca_system_score_codex":0.0012071058,"about_ca_system_score_gemma":0.0018910833,"threshold_uncertainty_score":0.018024564},"labels":[],"label_agreement":null},{"id":"W2998743225","doi":"10.1186/s13148-019-0804-0","title":"Frameshift mutations at the C-terminus of HIST1H1E result in a specific DNA hypomethylation signature","year":2020,"lang":"en","type":"article","venue":"Clinical Epigenetics","topic":"Genomics and Chromatin Dynamics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":60,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"London Health Sciences Centre; Western University","funders":"Fondazione Bambino Gesù; Istituto Superiore di Sanità; Illumina; Ministero della Salute; London Health Sciences Centre","keywords":"Frameshift mutation; DNA methylation; Epigenetics; Genetics; Human genetics; Biology; Proband; Gene; Computational biology; Bioinformatics; Methylation; Medicine; Exon; Mutation; Gene expression","score_opus":0.03336429675200332,"score_gpt":0.3041740722003124,"score_spread":0.2708097754483091,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2998743225","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9874559,0.00013142948,0.011007433,0.000039459614,0.0000054116026,0.000023802335,0.00065288314,0.00025873524,0.00042497026],"genre_scores_gemma":[0.99560744,0.00003883765,0.0036296651,0.000018412386,0.0000029372204,0.000008010323,0.00047725977,0.0000111003565,0.0002064491],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999193,0.000010957414,0.00000673914,0.000035430723,0.000018889683,0.000008738837],"domain_scores_gemma":[0.9998087,0.00009462071,0.00005005557,0.00001864424,0.000013717083,0.000014207616],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00020806177,0.0003116163,0.00020716956,0.0003459177,0.00011589978,0.00017407729,0.00016955701,0.00028667226,0.0014528228],"category_scores_gemma":[0.00073255535,0.000081412276,0.00023356325,0.00020762657,0.0001735918,0.00007136693,0.00014281305,0.0001657863,0.00028584886],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0008643103,0.000124625,0.34498557,0.00016018581,0.00030112133,0.00315521,0.00014005674,0.012257612,0.5825298,0.0010641292,0.0007046613,0.053712845],"study_design_scores_gemma":[0.00009377562,0.00039896677,0.56989163,0.00002988002,0.0002510145,0.013061634,0.00009860958,0.11098083,0.3001182,0.002696404,0.0023279618,0.000051083283],"about_ca_topic_score_codex":0.0013911626,"about_ca_topic_score_gemma":0.0021014232,"teacher_disagreement_score":0.0014528228,"about_ca_system_score_codex":0.0001888142,"about_ca_system_score_gemma":0.00014760056,"threshold_uncertainty_score":0.0048602223},"labels":[],"label_agreement":null},{"id":"W3003176324","doi":"10.1186/s13148-019-0800-4","title":"Elevated HDAC activity and altered histone phospho-acetylation confer acquired radio-resistant phenotype to breast cancer cells","year":2020,"lang":"en","type":"article","venue":"Clinical Epigenetics","topic":"Histone Deacetylase Inhibitors Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":59,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"Advanced Centre for Treatment, Research and Education in Cancer; Bhabha Atomic Research Centre; University Grants Commission; Department of Science and Technology, Ministry of Science and Technology, India","keywords":"Acetylation; Phenotype; Breast cancer; Epigenetics; Histone; Human genetics; Cancer research; Medicine; Biology; Cancer; Internal medicine; Genetics; Gene","score_opus":0.041572977840447015,"score_gpt":0.36525447356383506,"score_spread":0.32368149572338806,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3003176324","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9972596,0.000770672,0.00084336783,0.000033489297,0.000014013719,0.00001642049,0.00038735825,0.000037338643,0.00063769566],"genre_scores_gemma":[0.9974253,0.000334796,0.0005080151,0.00002514851,0.0000051718966,0.000021315414,0.000590628,0.000007484556,0.0010822947],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999063,0.000013916938,0.000011604108,0.000020484296,0.000023776003,0.00002395686],"domain_scores_gemma":[0.99993753,0.000010942931,0.000015858617,0.000011948518,0.000010161079,0.00001358238],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0000872116,0.00019570511,0.00026473185,0.00020427053,0.00010364339,0.00017556387,0.00009982907,0.00015724394,0.0021518918],"category_scores_gemma":[0.0000817903,0.00012696552,0.00020590039,0.00015958399,0.00011735385,0.000050549374,0.00011400481,0.00027675464,0.0003946646],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008421926,0.000015673673,0.0011817685,0.000017913027,0.000008610615,0.00006683943,0.000013891495,0.00002210226,0.9979431,0.000015553584,0.000030283187,0.0006000643],"study_design_scores_gemma":[0.00001096766,0.0006310674,0.050116703,0.0000040684854,0.000041778945,0.0012526467,0.000071440416,0.00046067662,0.94557315,0.000029935249,0.0018024638,0.000005148971],"about_ca_topic_score_codex":0.0006475488,"about_ca_topic_score_gemma":0.0006746938,"teacher_disagreement_score":0.0021518918,"about_ca_system_score_codex":0.00013912705,"about_ca_system_score_gemma":0.00009007779,"threshold_uncertainty_score":0.00719887},"labels":[],"label_agreement":null},{"id":"W3004003902","doi":"10.1186/s13148-019-0805-z","title":"Replication and expansion of epigenome-wide association literature in a black South African population","year":2020,"lang":"en","type":"article","venue":"Clinical Epigenetics","topic":"Epigenetics and DNA Methylation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":21,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"North-West University; Medical Research Council; South African Medical Research Council; National Research Foundation; University of Bristol; Academy of Medical Sciences; McMaster University; Newton Fund; Hamilton Health Sciences","keywords":"Epigenome; DNA methylation; Epigenetics; Biology; Genetics; Population; Human genetics; CpG site; Methylation; Genome-wide association study; Genetic association; Medicine; Gene; Genotype; Single-nucleotide polymorphism; Environmental health","score_opus":0.03195256271021414,"score_gpt":0.31748910244668965,"score_spread":0.2855365397364755,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3004003902","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9779589,0.004944721,0.009376571,0.00077381684,0.00021484839,0.00043028544,0.0031037775,0.0000750176,0.0031220452],"genre_scores_gemma":[0.99228376,0.0013927458,0.0034156821,0.0003631582,0.00006775904,0.00041993076,0.0013654274,0.00003620583,0.00065530074],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99590236,0.0016917142,0.00031509064,0.0011090756,0.00062070554,0.00036110455],"domain_scores_gemma":[0.98965704,0.0036171551,0.0012622771,0.003308666,0.0017570449,0.0003979017],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.01425553,0.0007070842,0.00066695304,0.0019081169,0.0016000103,0.0011036547,0.00087765226,0.0007432845,0.003487545],"category_scores_gemma":[0.018989297,0.00039188223,0.0009426165,0.0031983927,0.0009634946,0.0005430042,0.0015247754,0.00081684627,0.0004295875],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0011693203,0.000119870005,0.93316245,0.0007979941,0.0020564138,0.001250743,0.0035956597,0.0004156699,0.017755354,0.0008351672,0.0016687494,0.037172657],"study_design_scores_gemma":[0.00013837415,0.00025533902,0.9867884,0.00023671637,0.00090215873,0.00054270535,0.00062382844,0.00034393123,0.001986571,0.0006128069,0.0075486344,0.000020673691],"about_ca_topic_score_codex":0.01145347,"about_ca_topic_score_gemma":0.015057452,"teacher_disagreement_score":0.01425553,"about_ca_system_score_codex":0.0005809261,"about_ca_system_score_gemma":0.0013338748,"threshold_uncertainty_score":0.07539129},"labels":[],"label_agreement":null},{"id":"W3014445345","doi":"10.1186/s13148-020-00844-2","title":"Adverse childhood experiences, DNA methylation age acceleration, and cortisol in UK children: a prospective population-based cohort study","year":2020,"lang":"en","type":"article","venue":"Clinical Epigenetics","topic":"Epigenetics and DNA Methylation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":65,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"St. Michael's Hospital","funders":"Economic and Social Research Council; University of Bristol; Biotechnology and Biological Sciences Research Council; Directorate for Biological Sciences; Medical Research Council; Wellcome Trust","keywords":"Human genetics; DNA methylation; Prospective cohort study; Medicine; Cohort; Cohort study; Population; Genetics; Demography; Pediatrics; Bioinformatics; Biology; Internal medicine; Environmental health; Gene","score_opus":0.022844940971011966,"score_gpt":0.3197192255497258,"score_spread":0.29687428457871384,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3014445345","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9979346,0.00031934783,0.00009784459,0.00003414853,0.000008825316,0.000022149276,0.0013990751,0.000003775169,0.00018039574],"genre_scores_gemma":[0.99782664,0.00042140132,0.00022034411,0.0000420947,0.000009837839,0.00005108379,0.0011396736,0.000003973005,0.00028492196],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9986046,0.00043641214,0.00016850396,0.00036686467,0.00022793325,0.0001957023],"domain_scores_gemma":[0.99743575,0.00033446072,0.0010830308,0.00045780023,0.00027509313,0.00041386776],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0011918861,0.0006566544,0.0007783222,0.0011341922,0.00093500625,0.0012258261,0.0008444589,0.00081701553,0.0018412434],"category_scores_gemma":[0.0030019872,0.0010115664,0.0011126582,0.002451029,0.00071158225,0.00068274944,0.0015426361,0.0011977592,0.0004585775],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000068862886,0.00002182779,0.9988809,0.000013407807,0.0001015178,0.0001027364,0.00021460495,0.000025343435,0.00011335459,0.0000125923,0.00010752317,0.0003373572],"study_design_scores_gemma":[0.000006636415,0.00004874924,0.9993887,0.000011329108,0.000030594074,0.00015337633,0.00017155448,0.000043733642,0.000018466459,0.0000053829813,0.00011783976,0.0000036172453],"about_ca_topic_score_codex":0.0805961,"about_ca_topic_score_gemma":0.07978987,"teacher_disagreement_score":0.0805961,"about_ca_system_score_codex":0.00097364304,"about_ca_system_score_gemma":0.00072702667,"threshold_uncertainty_score":0.16025394},"labels":[],"label_agreement":null},{"id":"W3014518127","doi":"10.1186/s13148-020-00840-6","title":"DNA methylation age calculators reveal association with diabetic neuropathy in type 1 diabetes","year":2020,"lang":"en","type":"article","venue":"Clinical Epigenetics","topic":"Epigenetics and DNA Methylation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":48,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Sinai Health System; Lunenfeld-Tanenbaum Research Institute; Hospital for Sick Children; Public Health Ontario; SickKids Foundation; University of Toronto; McMaster University","funders":"National Institute of Diabetes and Digestive and Kidney Diseases; National Cancer Institute; National Heart, Lung, and Blood Institute; National Institutes of Health","keywords":"Medicine; dNaM; Diabetes mellitus; Internal medicine; Diabetic retinopathy; Population; Diabetic nephropathy; Retinopathy; Type 2 diabetes; Type 1 diabetes; Epidemiology; Nephropathy; Endocrinology; DNA methylation; Biology; Genetics","score_opus":0.03326631883177393,"score_gpt":0.3055921445345133,"score_spread":0.27232582570273933,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3014518127","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9913288,0.0025742329,0.002836209,0.00007835663,0.000024581463,0.000023996558,0.0015999149,0.00010620807,0.0014277807],"genre_scores_gemma":[0.9953561,0.00039589332,0.0028102733,0.000039445236,0.000015711823,0.00002676926,0.000676367,0.000014099845,0.00066540326],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9996159,0.00012504554,0.000035173638,0.00012806342,0.00007008254,0.000025772904],"domain_scores_gemma":[0.99825567,0.00060048094,0.0006672137,0.00015606207,0.00022764313,0.00009292003],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008852534,0.00032666116,0.00028419614,0.0009834793,0.00017236336,0.00047907614,0.00027844374,0.0003260352,0.0017799345],"category_scores_gemma":[0.0028567163,0.00017079606,0.00038778136,0.0012147119,0.00011540175,0.00020141088,0.00033075258,0.00047465085,0.00030547936],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0004902602,0.000028000504,0.9838468,0.00004138206,0.00014971055,0.000022747581,0.00005059614,0.00027999395,0.0010520251,0.000027779686,0.00019141113,0.013819276],"study_design_scores_gemma":[0.00001106898,0.00012541511,0.9961448,0.000017442602,0.00014774961,0.00014580856,0.000051008483,0.0017251011,0.00096668914,0.00013564617,0.0005207219,0.000008550264],"about_ca_topic_score_codex":0.0025532017,"about_ca_topic_score_gemma":0.0033318566,"teacher_disagreement_score":0.0025532017,"about_ca_system_score_codex":0.00025055962,"about_ca_system_score_gemma":0.00014270048,"threshold_uncertainty_score":0.005954504},"labels":[],"label_agreement":null},{"id":"W3035710795","doi":"10.1186/s13148-020-00864-y","title":"Harnessing peripheral DNA methylation differences in the Alzheimer’s Disease Neuroimaging Initiative (ADNI) to reveal novel biomarkers of disease","year":2020,"lang":"en","type":"article","venue":"Clinical Epigenetics","topic":"Epigenetics and DNA Methylation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":104,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institute of Biomedical Imaging and Bioengineering; Canadian Institutes of Health Research; National Institutes of Health; Genentech; U.S. National Library of Medicine; IXICO; H. Lundbeck A/S; Servier; Eisai; Northern California Institute for Research and Education; Pfizer; Biogen; BioClinica; F. Hoffmann-La Roche; University of Southern California; Eli Lilly and Company; U.S. Department of Defense; Meso Scale Diagnostics; Alzheimer's Disease Neuroimaging Initiative; Novartis Pharmaceuticals Corporation; Bristol-Myers Squibb; National Institute on Aging; Alzheimer's Association; Foundation for the National Institutes of Health","keywords":"DNA methylation; Alzheimer's Disease Neuroimaging Initiative; Neuroimaging; Dementia; Biomarker; Disease; Cohort; Neurology; Oncology; Alzheimer's disease; Cognitive decline; Neurodegeneration; Medicine; Bioinformatics; Internal medicine; Biology; Neuroscience; Genetics; Gene; Gene expression","score_opus":0.13634949814773797,"score_gpt":0.3711695822886595,"score_spread":0.2348200841409215,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3035710795","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97328746,0.0010499872,0.007030609,0.00031211678,0.00002930661,0.00015568905,0.014502796,0.00014803257,0.0034840417],"genre_scores_gemma":[0.9770333,0.00030204543,0.010669619,0.0002709954,0.000039396877,0.0003303237,0.009483585,0.00005920707,0.0018115635],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9994617,0.00012883027,0.00003328015,0.00024169251,0.00008155033,0.00005300244],"domain_scores_gemma":[0.9995134,0.00007047492,0.0001447082,0.00008773573,0.00010245351,0.0000812924],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00088318175,0.00031754692,0.00036794154,0.0007979053,0.0005050739,0.0006013798,0.0004042286,0.00035750773,0.0023514424],"category_scores_gemma":[0.0016712267,0.00017212292,0.00023710841,0.0008704018,0.00022675045,0.00018383574,0.0007185709,0.00036111294,0.00040791242],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0024188778,0.00020609441,0.8015363,0.0003057073,0.000890803,0.00030373395,0.0009621434,0.0012250645,0.12700084,0.00092520966,0.0052779014,0.058947343],"study_design_scores_gemma":[0.000056793513,0.00040475337,0.96960896,0.00004693392,0.0003211894,0.0008910074,0.00023954011,0.0019570307,0.016596587,0.0015513961,0.008299018,0.000026849802],"about_ca_topic_score_codex":0.0046458356,"about_ca_topic_score_gemma":0.013145733,"teacher_disagreement_score":0.0046458356,"about_ca_system_score_codex":0.00030938193,"about_ca_system_score_gemma":0.00036508552,"threshold_uncertainty_score":0.009237587},"labels":[],"label_agreement":null},{"id":"W3047511740","doi":"10.1186/s13148-020-00909-2","title":"Epigenetic age and pregnancy outcomes: GrimAge acceleration is associated with shorter gestational length and lower birthweight","year":2020,"lang":"en","type":"article","venue":"Clinical Epigenetics","topic":"Birth, Development, and Health","field":"Medicine","cited_by":42,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Athabasca University; University of Calgary","funders":"Eunice Kennedy Shriver National Institute of Child Health and Human Development; National Center for Advancing Translational Sciences; National Center for Research Resources; National Institutes of Health","keywords":"dNaM; Gestational age; Medicine; Pregnancy; Body mass index; Obstetrics; Birth weight; Gestation; Epigenetics; DNA methylation; Internal medicine; Biology; Genetics","score_opus":0.09456844817985295,"score_gpt":0.35933814863588953,"score_spread":0.2647697004560366,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3047511740","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99850416,0.00050710345,0.00017114,0.00009190512,0.0000059230106,0.0000028882118,0.0002279251,0.000005785136,0.00048316465],"genre_scores_gemma":[0.9994129,0.0001333414,0.00012664305,0.000016255914,0.0000065937274,0.000002668353,0.0001032909,0.0000018171129,0.00019654236],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99980646,0.00006303594,0.0000136268645,0.00005786898,0.000030997315,0.000028038052],"domain_scores_gemma":[0.9981059,0.00041766875,0.0010487213,0.00013988749,0.000091313545,0.00019659461],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00043385124,0.00019701738,0.00017573117,0.00030405214,0.00012190147,0.00035875337,0.00024941342,0.00023954589,0.0022278905],"category_scores_gemma":[0.0025388447,0.00012693781,0.00027907494,0.00037576674,0.00018185002,0.00014690623,0.00026000093,0.00043111402,0.00013822521],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00017258542,0.000012787311,0.9972289,0.000008606759,0.0000536577,0.000043003067,0.000026930786,0.000033655393,0.0006296966,0.000020470148,0.000038953727,0.0017306298],"study_design_scores_gemma":[0.0000016036965,0.000037784328,0.9994666,0.0000031023249,0.000020143185,0.000088384135,0.000020315501,0.00011586773,0.00013528609,0.000022952194,0.00008682281,0.0000010671263],"about_ca_topic_score_codex":0.0038146677,"about_ca_topic_score_gemma":0.0029030254,"teacher_disagreement_score":0.0038146677,"about_ca_system_score_codex":0.00016600317,"about_ca_system_score_gemma":0.00025967593,"threshold_uncertainty_score":0.0075849295},"labels":[],"label_agreement":null},{"id":"W3089820751","doi":"10.1186/s13148-020-00931-4","title":"TWIST1 DNA methylation is a cell marker of airway and parenchymal lung fibroblasts that are differentially methylated in asthma","year":2020,"lang":"en","type":"article","venue":"Clinical Epigenetics","topic":"Epigenetics and DNA Methylation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":10,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"St. Joseph’s Healthcare Hamilton; University of British Columbia; McMaster University; BC Children's Hospital","funders":"NIHR Nottingham Biomedical Research Centre; Canadian Institutes of Health Research; Rosetrees Trust; Lloyd's Tercentenary Research Foundation; Asthma and Lung UK; European Respiratory Society; Canadian Lung Association; Canadian Institute for Advanced Research; Biotechnology and Biological Sciences Research Council; Canadian Thoracic Society; Medical Research Council; Henry Smith Charity; British Columbia Lung Association; National Institute for Health and Care Research; Teva Pharmaceutical Industries","keywords":"DNA methylation; Biology; Methylation; Epigenetics; Parenchyma; Epigenomics; Gene expression; Lung; Pathology; Immunology; Cancer research; Gene; Medicine; Genetics; Internal medicine","score_opus":0.03505330854802528,"score_gpt":0.3081378256852213,"score_spread":0.273084517137196,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3089820751","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99711394,0.0010133266,0.0008691413,0.000041175765,0.000006285992,0.000012439821,0.0004311043,0.000013792574,0.00049872266],"genre_scores_gemma":[0.9987649,0.000175293,0.00057794695,0.00001620845,0.0000050831327,0.000012079332,0.00023108773,0.0000030152717,0.00021440716],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99979156,0.000048545047,0.000019892965,0.000056683617,0.000049474525,0.00003380759],"domain_scores_gemma":[0.99967563,0.000089144254,0.00013067815,0.000019074301,0.000041805863,0.000043637363],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003128791,0.0001745515,0.00026891936,0.00046694197,0.00020964009,0.00020304484,0.00014522682,0.00027061047,0.001863423],"category_scores_gemma":[0.0006028831,0.0001275779,0.00016820309,0.00034199547,0.00020627433,0.000092693685,0.00019083045,0.00025374212,0.00021333844],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0014842234,0.000029552231,0.5160927,0.00017271786,0.00012495488,0.00047275095,0.00031441468,0.00019029828,0.46674475,0.00007482782,0.00021073323,0.014088089],"study_design_scores_gemma":[0.000012369975,0.00020351693,0.9704461,0.00001697705,0.000069412876,0.0017392775,0.00017421061,0.00036041212,0.026317703,0.00012615412,0.0005267068,0.0000071105683],"about_ca_topic_score_codex":0.0010581823,"about_ca_topic_score_gemma":0.0018339361,"teacher_disagreement_score":0.001863423,"about_ca_system_score_codex":0.00014122175,"about_ca_system_score_gemma":0.0001070572,"threshold_uncertainty_score":0.006233752},"labels":[],"label_agreement":null},{"id":"W3106006957","doi":"10.1186/s13148-020-00943-0","title":"BET protein inhibitor apabetalone (RVX-208) suppresses pro-inflammatory hyper-activation of monocytes from patients with cardiovascular disease and type 2 diabetes","year":2020,"lang":"en","type":"article","venue":"Clinical Epigenetics","topic":"Protein Degradation and Inhibitors","field":"Biochemistry, Genetics and Molecular Biology","cited_by":38,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Resverlogix (Canada)","funders":"Nederlandse Organisatie voor Wetenschappelijk Onderzoek; Hartstichting; ZonMw","keywords":"Type 2 diabetes; Disease; Medicine; Diabetes mellitus; Inflammation; Atherosclerotic cardiovascular disease; Human genetics; Immunology; Type 2 Diabetes Mellitus; Internal medicine; Bioinformatics; Endocrinology; Biology; Biochemistry","score_opus":0.02273835249186799,"score_gpt":0.24356371262765383,"score_spread":0.22082536013578585,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3106006957","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99807584,0.0011426931,0.00019088079,0.000046778237,0.000029164734,0.00001701266,0.00012856234,0.0000147614855,0.00035428125],"genre_scores_gemma":[0.99759185,0.00063846656,0.00042543717,0.000072283525,0.000022737344,0.000029721168,0.0004433694,0.000003350555,0.0007727144],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999454,0.000012890484,0.000005646289,0.000007920706,0.000010481959,0.00001765685],"domain_scores_gemma":[0.99994683,0.0000060751336,0.000010613202,0.000003880617,0.0000057588245,0.000026889056],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00008995066,0.00025271843,0.00027893475,0.00011160966,0.00011003447,0.00018235375,0.00008311584,0.00012515443,0.0012232454],"category_scores_gemma":[0.00011016665,0.00007852261,0.00018509722,0.00008633681,0.00006721122,0.00005277911,0.00014734491,0.00039588756,0.00023552174],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0067449296,0.00056537165,0.0035027359,0.00011565771,0.000029069372,0.00023459282,0.0000409707,0.00008005449,0.9753263,0.000026111,0.0002609264,0.013073268],"study_design_scores_gemma":[0.0023328804,0.03748356,0.19459584,0.0000724839,0.00026213663,0.004247709,0.0003863318,0.002088741,0.74739593,0.00012846649,0.010978497,0.000027453232],"about_ca_topic_score_codex":0.00023986014,"about_ca_topic_score_gemma":0.00047906747,"teacher_disagreement_score":0.0012232454,"about_ca_system_score_codex":0.00006224215,"about_ca_system_score_gemma":0.000124104,"threshold_uncertainty_score":0.004092157},"labels":[],"label_agreement":null},{"id":"W3112369087","doi":"10.1186/s13148-020-00988-1","title":"High-resolution analyses of human sperm dynamic methylome reveal thousands of novel age-related epigenetic alterations","year":2020,"lang":"en","type":"article","venue":"Clinical Epigenetics","topic":"Epigenetics and DNA Methylation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":70,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University Health Centre; National Research Council Canada; McGill University and Génome Québec Innovation Centre; McGill University","funders":"Canadian Institutes of Health Research; McGill University Health Centre; McGill University","keywords":"DNA methylation; CpG site; Epigenome; Biology; Methylation; Epigenetics; Differentially methylated regions; Human genetics; Sperm; Genetics; Andrology; Gene; Medicine; Gene expression","score_opus":0.1095152211219206,"score_gpt":0.41899050067404875,"score_spread":0.30947527955212817,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3112369087","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98228776,0.0026474018,0.008678903,0.000086648055,0.0000108977165,0.0000208655,0.0054469863,0.00013296067,0.00068754907],"genre_scores_gemma":[0.9849466,0.0007733875,0.007414971,0.00011520188,0.000016486876,0.000023589619,0.005867966,0.00002385253,0.000818063],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9999118,0.000008815554,0.0000061614132,0.000038325943,0.000021603579,0.000013333731],"domain_scores_gemma":[0.9998222,0.000049055307,0.00005480867,0.000020680482,0.000034916407,0.000018316474],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002492418,0.00017901977,0.0002598872,0.00040280537,0.00016697822,0.00020191794,0.00016230621,0.0002760089,0.0015288681],"category_scores_gemma":[0.00040020017,0.00014695582,0.00030288793,0.00046450252,0.00009088721,0.00012567813,0.0002371394,0.00023564078,0.00037655965],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00038639552,0.00004166264,0.20171091,0.00030182532,0.0003431104,0.00013612819,0.0001685955,0.0017187946,0.7657038,0.00016168646,0.00067969237,0.028647479],"study_design_scores_gemma":[0.000014410689,0.00022271115,0.89947605,0.00001898438,0.00017563769,0.00055333064,0.00008574792,0.0051326356,0.09037845,0.00028081465,0.0036411237,0.000020076568],"about_ca_topic_score_codex":0.00165146,"about_ca_topic_score_gemma":0.003999165,"teacher_disagreement_score":0.00165146,"about_ca_system_score_codex":0.0001389621,"about_ca_system_score_gemma":0.00013289815,"threshold_uncertainty_score":0.0051145554},"labels":[],"label_agreement":null},{"id":"W3112830085","doi":"10.1186/s13148-020-00984-5","title":"Longitudinal data in peripheral blood confirm that PM20D1 is a quantitative trait locus (QTL) for Alzheimer’s disease and implicate its dynamic role in disease progression","year":2020,"lang":"en","type":"article","venue":"Clinical Epigenetics","topic":"Epigenetics and DNA Methylation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":31,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institute of Biomedical Imaging and Bioengineering; Canadian Institutes of Health Research; Genentech; National Institutes of Health; Servier; Eisai; BioClinica; U.S. Department of Defense; Alzheimer's Disease Neuroimaging Initiative; Northern California Institute for Research and Education; F. Hoffmann-La Roche; University of Southern California; Biogen; Eli Lilly and Company; Bristol-Myers Squibb; National Institute on Aging; Alzheimer's Association; Foundation for the National Institutes of Health","keywords":"Quantitative trait locus; Disease; Trait; Human genetics; Locus (genetics); Peripheral; Peripheral blood; Biology; Medicine; Genetics; Internal medicine; Gene; Computer science","score_opus":0.1494110351952993,"score_gpt":0.4283213286511658,"score_spread":0.2789102934558665,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3112830085","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98001593,0.0011910968,0.01143568,0.0001084432,0.000012603437,0.000024471368,0.0062374976,0.00008998303,0.00088435906],"genre_scores_gemma":[0.9893854,0.0004582023,0.005819631,0.000093202085,0.000017766177,0.0000625252,0.0035040257,0.000021536043,0.00063758914],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9997706,0.000042170715,0.000013359351,0.00010961444,0.000044278906,0.000019925508],"domain_scores_gemma":[0.99905366,0.00030529517,0.0003557416,0.0001009078,0.00011013782,0.000074228905],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007956059,0.00023833346,0.0002537332,0.00043798797,0.00022463707,0.00030122255,0.00026812422,0.00023658968,0.0025022798],"category_scores_gemma":[0.0015661952,0.00013048829,0.0003525495,0.00065487664,0.00015013073,0.00013749367,0.00030090913,0.00033481474,0.00033321715],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006536106,0.00008094435,0.9032374,0.00011357562,0.00043131,0.00022326509,0.0002424865,0.00054137205,0.06576071,0.00024358141,0.0007152404,0.027756434],"study_design_scores_gemma":[0.000017660712,0.00021072467,0.9890513,0.000013286278,0.00011460136,0.00050308235,0.000050916937,0.0006666126,0.006966218,0.00036640343,0.0020317086,0.000007346825],"about_ca_topic_score_codex":0.002310782,"about_ca_topic_score_gemma":0.0032310958,"teacher_disagreement_score":0.0025022798,"about_ca_system_score_codex":0.00022990444,"about_ca_system_score_gemma":0.00018243949,"threshold_uncertainty_score":0.0083709955},"labels":[],"label_agreement":null},{"id":"W3119557573","doi":"10.1186/s13148-020-00990-7","title":"DNA methylation epi-signature is associated with two molecularly and phenotypically distinct clinical subtypes of Phelan-McDermid syndrome","year":2021,"lang":"en","type":"article","venue":"Clinical Epigenetics","topic":"Genomic variations and chromosomal abnormalities","field":"Biochemistry, Genetics and Molecular Biology","cited_by":40,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"London Health Sciences Centre; Western University","funders":"Genome Canada","keywords":"Human genetics; DNA methylation; Genetics; Biology; DNA; Computational biology; Methylation; Signature (topology); Gene","score_opus":0.021830153368012042,"score_gpt":0.3059574599896115,"score_spread":0.28412730662159946,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3119557573","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9993284,0.000101288664,0.00019641501,0.00001681013,0.0000010504107,0.000006443892,0.00015382879,0.0000058197006,0.00019005612],"genre_scores_gemma":[0.9994473,0.00003572131,0.00021111232,0.000012721105,0.0000021733026,0.0000059263953,0.00018117629,0.0000026886455,0.00010116179],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9998282,0.000024524235,0.000017740636,0.00007001238,0.000033329587,0.000026094634],"domain_scores_gemma":[0.99969614,0.00006593851,0.00013916755,0.00001856893,0.000025331048,0.000054861735],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013002897,0.0003750535,0.00026454436,0.00073708675,0.00022593966,0.00023411462,0.00020248862,0.0003448057,0.0013560969],"category_scores_gemma":[0.00064270326,0.00013702655,0.00015863274,0.00043712877,0.00023522685,0.0001121791,0.00037204812,0.00025628263,0.00011154338],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0009977343,0.000055114906,0.87064904,0.000042787517,0.0001337793,0.0030669968,0.000310951,0.00017225799,0.11607968,0.00011315264,0.00015460853,0.008223861],"study_design_scores_gemma":[0.000011364832,0.00010698977,0.987889,0.000003706051,0.000043304684,0.007546949,0.00008413627,0.0002328991,0.003827616,0.00007233307,0.00017674183,0.000005057674],"about_ca_topic_score_codex":0.0011014747,"about_ca_topic_score_gemma":0.0012684519,"teacher_disagreement_score":0.0013560969,"about_ca_system_score_codex":0.00015329715,"about_ca_system_score_gemma":0.000110878456,"threshold_uncertainty_score":0.004536569},"labels":[],"label_agreement":null},{"id":"W3133587423","doi":"10.1186/s13148-021-01037-1","title":"Synergistic effects of type I PRMT and PARP inhibitors against non-small cell lung cancer cells","year":2021,"lang":"en","type":"article","venue":"Clinical Epigenetics","topic":"Cancer-related gene regulation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":74,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Centre Hospitalier Universitaire Sainte-Justine; Université Laval; Université de Montréal; McGill University","funders":"CIHR Skin Research Training Centre; Fonds de Recherche du Québec-Société et Culture","keywords":"Lung cancer; Combination therapy; Cancer research; Cancer; PARP inhibitor; Medicine; Methyltransferase; Targeted therapy; Pharmacology; Internal medicine; Biology; Poly ADP ribose polymerase; Biochemistry; Enzyme; DNA; Methylation","score_opus":0.010031127800389289,"score_gpt":0.29248463361816235,"score_spread":0.28245350581777307,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3133587423","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9758833,0.014973077,0.001781009,0.00019303238,0.00010080802,0.00019448367,0.0010167306,0.00015086173,0.0057066227],"genre_scores_gemma":[0.98915595,0.005469661,0.002229081,0.00010832414,0.000025966969,0.00009462122,0.00088486867,0.000012916256,0.0020187101],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998697,0.000020415911,0.00001405214,0.000026350675,0.000043430256,0.00002601434],"domain_scores_gemma":[0.9999399,0.00001285604,0.000014330613,0.0000065575864,0.000009374882,0.000016893433],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014586271,0.0005560565,0.00055532856,0.00046044195,0.00018053786,0.00023463975,0.00030044073,0.00025510465,0.0020267284],"category_scores_gemma":[0.00009035265,0.00014653213,0.0005439532,0.00042805762,0.000114605704,0.00017620702,0.00025286086,0.00043536923,0.00039432876],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00095884927,0.0005158557,0.0010703813,0.00049586437,0.000103547616,0.00018565198,0.000031805022,0.00076952664,0.97252584,0.00011854111,0.00052830717,0.022695823],"study_design_scores_gemma":[0.00019086008,0.0061623706,0.0066340524,0.000024408455,0.00020363991,0.00073114975,0.000035364737,0.0013851634,0.977958,0.0000479179,0.0066124345,0.000014620491],"about_ca_topic_score_codex":0.00043328936,"about_ca_topic_score_gemma":0.0015228036,"teacher_disagreement_score":0.0020267284,"about_ca_system_score_codex":0.00021426372,"about_ca_system_score_gemma":0.00027615554,"threshold_uncertainty_score":0.006780088},"labels":[],"label_agreement":null},{"id":"W3159791029","doi":"10.1186/s13148-021-01081-x","title":"Assessment of differentially methylated loci in individuals with end-stage kidney disease attributed to diabetic kidney disease: an exploratory study","year":2021,"lang":"en","type":"article","venue":"Clinical Epigenetics","topic":"Chronic Kidney Disease and Diabetes","field":"Medicine","cited_by":63,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institute of Diabetes and Digestive and Kidney Diseases; Centre for Public Health, Queen's University Belfast; Perelman School of Medicine, University of Pennsylvania; University of California, San Diego; Medical Research Council; Samfundet Folkhälsan; Institute of Genetics; National Institutes of Health; Queen's University; Monash University; University College Dublin; Public Health Agency; Science Foundation Ireland; Department for the Economy; Economic and Social Research Council; Broad Institute; University of Pennsylvania; Wellcome Trust; Queen's University Belfast; Helsingin Yliopisto; Massachusetts General Hospital","keywords":"Disease; Kidney disease; Human genetics; End-stage kidney disease; End stage renal disease; Kidney; Medicine; Diabetes mellitus; Stage (stratigraphy); Biology; Bioinformatics; Internal medicine; Genetics; Endocrinology; Gene","score_opus":0.0535737403221971,"score_gpt":0.38312780725366485,"score_spread":0.32955406693146777,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3159791029","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99929905,0.00006766935,0.0002759405,0.0000074404456,8.7834024e-7,0.000020472537,0.0001806896,0.0000027788626,0.0001451162],"genre_scores_gemma":[0.99903464,0.000025492547,0.00045756757,0.000016268805,0.0000025397167,0.000023740375,0.00022942746,0.0000019546699,0.0002083714],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9996171,0.00011927517,0.000024287217,0.00014735093,0.000040901683,0.00005102487],"domain_scores_gemma":[0.9994758,0.00013276101,0.00014180264,0.000065118424,0.00007989805,0.000104677034],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007044637,0.00034249877,0.00031630992,0.0005347301,0.00056739704,0.00033221068,0.0002876099,0.00038956266,0.0014621259],"category_scores_gemma":[0.0011103326,0.00014787512,0.00036751808,0.00056819775,0.00027223947,0.00016475505,0.00062038715,0.00027811527,0.00026630313],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0018770582,0.0002836343,0.97701204,0.00005904147,0.00015824505,0.00066314626,0.00084693835,0.00008165513,0.012901429,0.00006805431,0.0001369873,0.0059116296],"study_design_scores_gemma":[0.000050094954,0.0020327047,0.9920402,0.000009390721,0.00016397973,0.0016815648,0.00065587385,0.00028678757,0.002159107,0.00009195507,0.00081783504,0.000010443946],"about_ca_topic_score_codex":0.0013361475,"about_ca_topic_score_gemma":0.0013649513,"teacher_disagreement_score":0.0014621259,"about_ca_system_score_codex":0.00017180957,"about_ca_system_score_gemma":0.00022598014,"threshold_uncertainty_score":0.004891336},"labels":[],"label_agreement":null},{"id":"W3175903268","doi":"10.1186/s13148-021-01114-5","title":"Detecting cord blood cell type-specific epigenetic associations with gestational diabetes mellitus and early childhood growth","year":2021,"lang":"en","type":"article","venue":"Clinical Epigenetics","topic":"Epigenetics and DNA Methylation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":13,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill Genome Centre; McGill University; Centre Intégré Universitaire de Santé et de Services Sociaux du Saguenay–Lac-Saint-Jean; McGill University Health Centre; Centre Hospitalier Universitaire de Sherbrooke; Université de Sherbrooke; Jewish General Hospital","funders":"National Institute of Environmental Health Sciences; Canadian Institutes of Health Research; Fonds de Recherche du Québec - Santé; Compute Canada; National Institutes of Health; American Diabetes Association","keywords":"dNaM; Cord blood; CpG site; Epigenetics; DNA methylation; Biology; Gestational diabetes; Immunology; Medicine; Bioinformatics; Internal medicine; Pregnancy; Genetics; Gene; Gestation; Gene expression","score_opus":0.021922570957842908,"score_gpt":0.2788756389156575,"score_spread":0.2569530679578146,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3175903268","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.993036,0.0006867595,0.004055587,0.000038960818,0.0000075441817,0.000018455867,0.0014927434,0.000052162894,0.00061173097],"genre_scores_gemma":[0.9927146,0.0002582962,0.005078468,0.000044964632,0.0000053244194,0.000028480637,0.0014113582,0.0000125234465,0.00044604906],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9997695,0.000039062168,0.000018699064,0.00009627753,0.00004150935,0.000035023648],"domain_scores_gemma":[0.9995672,0.0001356651,0.0001443159,0.000056048062,0.000051946692,0.000044817032],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003795696,0.0002547265,0.00023405503,0.0006692915,0.0001488954,0.00031967502,0.00023273719,0.00021525685,0.0018349234],"category_scores_gemma":[0.0010715689,0.000107333195,0.00029630552,0.0007747507,0.00014340173,0.00006872767,0.0003619075,0.00026867463,0.0001680801],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005332268,0.000026578302,0.906271,0.000093754716,0.00026416287,0.000120759774,0.00010140367,0.00040604852,0.06649548,0.00011762425,0.00019519932,0.025374701],"study_design_scores_gemma":[0.000010931242,0.00011856402,0.974649,0.000015030558,0.00017100612,0.00035191327,0.00004968533,0.0012880287,0.022272589,0.00015529562,0.0009121461,0.0000056649505],"about_ca_topic_score_codex":0.0032253435,"about_ca_topic_score_gemma":0.005539392,"teacher_disagreement_score":0.0032253435,"about_ca_system_score_codex":0.00026876226,"about_ca_system_score_gemma":0.00024157643,"threshold_uncertainty_score":0.0064131618},"labels":[],"label_agreement":null},{"id":"W3180853053","doi":"10.1186/s13148-021-01126-1","title":"The dynamic broad epigenetic (H3K4me3, H3K27ac) domain as a mark of essential genes","year":2021,"lang":"en","type":"review","venue":"Clinical Epigenetics","topic":"Epigenetics and DNA Methylation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":263,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Lethbridge; University of Manitoba; CancerCare Manitoba","funders":"National Institute of Arthritis and Musculoskeletal and Skin Diseases; Comisión Nacional de Investigación Científica y Tecnológica; CancerCare Manitoba Foundation; National Institutes of Health; Agencia Nacional de Investigación y Desarrollo; University of Manitoba; Natural Sciences and Engineering Research Council of Canada","keywords":"Epigenetics; H3K4me3; Human genetics; Biology; Genetics; Gene; Computational biology; Epigenomics; Evolutionary biology; DNA methylation; Gene expression; Promoter","score_opus":0.036706751123896146,"score_gpt":0.4143564149759556,"score_spread":0.37764966385205945,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3180853053","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0015973164,0.991804,0.0015737735,0.0006567594,0.00022395345,0.000008688372,0.00013152706,0.00004432082,0.0039596823],"genre_scores_gemma":[0.00881623,0.98528427,0.001157626,0.00032858312,0.00032713948,0.000014557216,0.00025579098,0.00000786367,0.0038079193],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9998723,0.000017885632,0.000016907925,0.000037301823,0.00004185997,0.000013711389],"domain_scores_gemma":[0.999884,0.000043129774,0.000026262744,0.000004155235,0.000030237172,0.000012225896],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000269043,0.0005365691,0.00075219077,0.0012412291,0.00018924985,0.00078584783,0.00041913733,0.00050280284,0.0028308441],"category_scores_gemma":[0.0003154742,0.0001717878,0.0002783636,0.0013066386,0.00047001234,0.00075205276,0.00045238118,0.0007504073,0.001893761],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001577104,0.000044073855,0.0011618439,0.010340796,0.00009533417,0.00060679717,0.00017226131,0.0005656306,0.033693805,0.0061667655,0.021626242,0.9253687],"study_design_scores_gemma":[0.000008646894,0.00009498571,0.0042736875,0.00081818376,0.00010284009,0.0032696323,0.000104281025,0.00022732647,0.009293013,0.0037996736,0.9779775,0.000030285228],"about_ca_topic_score_codex":0.0008910045,"about_ca_topic_score_gemma":0.0011668901,"teacher_disagreement_score":0.0028308441,"about_ca_system_score_codex":0.0006162731,"about_ca_system_score_gemma":0.000688954,"threshold_uncertainty_score":0.009470105},"labels":[],"label_agreement":null},{"id":"W3183891477","doi":"10.1186/s13148-021-01137-y","title":"Aorta-specific DNA methylation patterns in cell-free DNA from patients with bicuspid aortic valve-associated aortopathy","year":2021,"lang":"en","type":"article","venue":"Clinical Epigenetics","topic":"Aortic Disease and Treatment Approaches","field":"Medicine","cited_by":14,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Libin Cardiovascular Institute of Alberta; Alberta Children's Hospital; University of Calgary","funders":"Alberta Children's Hospital Foundation; Children's Hospital Foundation; National Institutes of Health; National Heart, Lung, and Blood Institute; University of Calgary; Northwestern University","keywords":"Bicuspid aortic valve; Aorta; Medicine; Cardiology; Internal medicine; Aortic valve; Aortic dissection; Aortic aneurysm; Aneurysm; Surgery","score_opus":0.042095610255388535,"score_gpt":0.3009319565184354,"score_spread":0.25883634626304686,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3183891477","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9988035,0.00023967244,0.00033671057,0.000017665134,0.000002558917,0.0000046261684,0.00049102237,0.0000069677485,0.000097225435],"genre_scores_gemma":[0.9981743,0.00013082904,0.00064654514,0.000030959138,0.000004727059,0.000010218777,0.0008488324,0.0000037142377,0.0001497951],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9998565,0.000019736537,0.000013168199,0.000061867046,0.000028622577,0.000020223411],"domain_scores_gemma":[0.99974376,0.000078554775,0.000074699165,0.00001827754,0.000045254823,0.000039432078],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014006346,0.00014972671,0.00022960849,0.00076386635,0.00018313804,0.00027971264,0.00014990244,0.0002833315,0.0007296013],"category_scores_gemma":[0.00072613865,0.00010455276,0.0001157062,0.00047731918,0.0001517467,0.000083099905,0.00017180991,0.00019157173,0.0001230022],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00066300784,0.000038267375,0.91403824,0.00007516478,0.00008498688,0.00054419937,0.00039124364,0.00021680813,0.07417086,0.000038482347,0.00016581551,0.00957284],"study_design_scores_gemma":[0.000014780841,0.0002953821,0.98869693,0.000014806038,0.000063339256,0.0020385834,0.0002497821,0.00068323145,0.007081487,0.00006677293,0.00078459224,0.00001030791],"about_ca_topic_score_codex":0.0014922667,"about_ca_topic_score_gemma":0.0022710336,"teacher_disagreement_score":0.0014922667,"about_ca_system_score_codex":0.00013674905,"about_ca_system_score_gemma":0.00008235112,"threshold_uncertainty_score":0.0029671788},"labels":[],"label_agreement":null},{"id":"W3184107035","doi":"10.1186/s13148-021-01134-1","title":"Genome wide DNA methylation analysis of alveolar capillary dysplasia lung tissue reveals aberrant methylation of genes involved in development including the FOXF1 locus","year":2021,"lang":"en","type":"article","venue":"Clinical Epigenetics","topic":"Neonatal Respiratory Health Research","field":"Medicine","cited_by":28,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Stichting Vrienden van het Sophia; Hospital for Sick Children; Vrije Universiteit Amsterdam; Koninklijke Nederlandse Akademie van Wetenschappen","keywords":"DNA methylation; Methylation; Biology; Locus (genetics); Gene; Human genetics; Genetics; Genome; Epigenetics; Gene expression","score_opus":0.12977343114692577,"score_gpt":0.44310320939663017,"score_spread":0.3133297782497044,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3184107035","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99652857,0.0007572203,0.0014416502,0.000025121659,0.000003055886,0.000009027071,0.0009152877,0.0000320602,0.0002880837],"genre_scores_gemma":[0.99685574,0.00022138258,0.0013669566,0.000025227879,0.0000021308801,0.000013850854,0.0011642475,0.000007698236,0.000342667],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99989307,0.000009091135,0.0000062243494,0.00004467092,0.00002471361,0.000022327951],"domain_scores_gemma":[0.9999205,0.000020649482,0.000025257435,0.0000071706672,0.000011809011,0.000014644044],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000116943316,0.0001395871,0.00017646796,0.00049534306,0.00014860944,0.00014675992,0.000108073364,0.00019727867,0.00096028834],"category_scores_gemma":[0.00019043183,0.000088268825,0.00019442548,0.0002623441,0.000112018235,0.00004857972,0.00018271821,0.00017388536,0.00014292749],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00033081518,0.000015677122,0.046370357,0.00008445563,0.00009406192,0.00018583208,0.000092616785,0.00018865647,0.9434395,0.000036594247,0.000118428405,0.0090431385],"study_design_scores_gemma":[0.000023747494,0.00026818988,0.7884431,0.000017054592,0.00019259378,0.0024696079,0.00017114135,0.0023445326,0.20385289,0.00013191777,0.0020728882,0.000012417884],"about_ca_topic_score_codex":0.0012348372,"about_ca_topic_score_gemma":0.0025278148,"teacher_disagreement_score":0.0012348372,"about_ca_system_score_codex":0.00013101293,"about_ca_system_score_gemma":0.000098725715,"threshold_uncertainty_score":0.0032125115},"labels":[],"label_agreement":null},{"id":"W3186214210","doi":"10.1186/s13148-021-01124-3","title":"Differential DNA methylation by early versus late parenteral nutrition in the PICU: a biological basis for its impact on emotional and behavioral problems documented 4 years later","year":2021,"lang":"en","type":"article","venue":"Clinical Epigenetics","topic":"Clinical Nutrition and Gastroenterology","field":"Nursing","cited_by":13,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Stollery Children's Hospital; University of Alberta","funders":"H2020 European Research Council; Vlaamse regering; European Society for Clinical Nutrition and Metabolism; Vereniging Trustfonds Erasmus Universiteit Rotterdam; FP7 Ideas: European Research Council; Agentschap voor Innovatie door Wetenschap en Technologie","keywords":"Human genetics; DNA methylation; Medicine; Biology; Genetics; Gene","score_opus":0.10223568237202428,"score_gpt":0.41849568541252924,"score_spread":0.31626000304050494,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3186214210","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9973775,0.0014047908,0.00046458386,0.00014441372,0.000028058446,0.000028572342,0.0001998299,0.0000051274897,0.00034717895],"genre_scores_gemma":[0.99923193,0.00016635869,0.00028771875,0.000042276977,0.000017561188,0.00004799444,0.00010607511,0.0000011671467,0.00009895032],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9975121,0.0018179499,0.00009881685,0.00028358318,0.00017484004,0.00011268998],"domain_scores_gemma":[0.9957712,0.0029710333,0.0007246271,0.00020697912,0.00011480749,0.00021135245],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0037498607,0.0004450114,0.0006817293,0.00020462433,0.00018677134,0.00035334428,0.0004995869,0.00057341956,0.0016321517],"category_scores_gemma":[0.009522719,0.0001828885,0.0008956971,0.00036556614,0.00030952587,0.0003323618,0.0005397543,0.00095690775,0.000048003938],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.052168146,0.0005264844,0.90972394,0.00037612562,0.0026261434,0.00013404402,0.00018111938,0.0012050015,0.0021270667,0.00017194235,0.00025949572,0.030500393],"study_design_scores_gemma":[0.0012689566,0.0065205363,0.98518974,0.00007814255,0.0019114924,0.0000951035,0.00008008946,0.0031643705,0.00095896225,0.0003392102,0.0003825543,0.0000108853055],"about_ca_topic_score_codex":0.0014264596,"about_ca_topic_score_gemma":0.0012089256,"teacher_disagreement_score":0.0037498607,"about_ca_system_score_codex":0.00023153097,"about_ca_system_score_gemma":0.0004642575,"threshold_uncertainty_score":0.019831419},"labels":[],"label_agreement":null},{"id":"W3192946237","doi":"10.1186/s13148-021-01145-y","title":"Childhood-onset dystonia-causing KMT2B variants result in a distinctive genomic hypermethylation profile","year":2021,"lang":"en","type":"article","venue":"Clinical Epigenetics","topic":"Genomics and Rare Diseases","field":"Biochemistry, Genetics and Molecular Biology","cited_by":37,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"London Health Sciences Centre; Western University","funders":"Ministero della Salute; Ospedale Pediatrico Bambino Gesù; Fondazione Bambino Gesù; Genome Canada","keywords":"Haploinsufficiency; Dystonia; DNA methylation; Frameshift mutation; Genetics; Epigenetics; Missense mutation; Biology; Bioinformatics; Phenotype; Gene; Neuroscience; Gene expression","score_opus":0.024601936486672426,"score_gpt":0.3213930066617164,"score_spread":0.29679107017504397,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3192946237","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99626875,0.00046604368,0.0011885632,0.00007013316,0.000004516292,0.000013197551,0.0010132297,0.000046251724,0.0009293495],"genre_scores_gemma":[0.99815375,0.0001457387,0.00079911365,0.000031694926,0.000005068766,0.000008942762,0.00053474895,0.0000161072,0.00030475846],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99986506,0.000010245893,0.000009732658,0.00006770588,0.00002633626,0.000020809312],"domain_scores_gemma":[0.999828,0.000038530878,0.000077338766,0.000011388632,0.000016141743,0.00002865675],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00007537949,0.00039228384,0.0002272814,0.00050085934,0.00023303585,0.00024467823,0.00013448142,0.00033133233,0.002564319],"category_scores_gemma":[0.00044314368,0.00010230805,0.00012249772,0.00043787528,0.00024875748,0.00007857294,0.0003098873,0.0002536299,0.0003066109],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00067900756,0.00006129939,0.558098,0.00014045507,0.00014303214,0.011922542,0.0007211583,0.00041867603,0.40427473,0.00029907536,0.00092098233,0.022320978],"study_design_scores_gemma":[0.000023810446,0.00015802345,0.907823,0.000025509336,0.00008858025,0.0518151,0.00024589745,0.0006387959,0.03649678,0.00021738942,0.0024532182,0.0000138557925],"about_ca_topic_score_codex":0.0014686582,"about_ca_topic_score_gemma":0.0021071846,"teacher_disagreement_score":0.002564319,"about_ca_system_score_codex":0.00022246069,"about_ca_system_score_gemma":0.00012782718,"threshold_uncertainty_score":0.008578479},"labels":[],"label_agreement":null},{"id":"W3193774255","doi":"10.1186/s13148-021-01151-0","title":"Pre-implantation alcohol exposure induces lasting sex-specific DNA methylation programming errors in the developing forebrain","year":2021,"lang":"en","type":"article","venue":"Clinical Epigenetics","topic":"Prenatal Substance Exposure Effects","field":"Medicine","cited_by":33,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Cegep Edouard Montpetit; McGill University; McGill University Health Centre; Université de Montréal; Centre Hospitalier Universitaire Sainte-Justine","funders":"Fonds de Recherche du Québec - Santé; Canadian Institutes of Health Research; Hospital for Sick Children; Université de Montréal; Sick Kids Foundation","keywords":"DNA methylation; Reprogramming; Epigenetics; Forebrain; Methylation; Biology; Fetus; Fetal alcohol syndrome; Genomic imprinting; Genetics; DNA; Neuroscience; Pregnancy; Cell; Gene; Gene expression; Central nervous system","score_opus":0.09360501136079807,"score_gpt":0.3807699293412448,"score_spread":0.28716491798044674,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3193774255","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9966253,0.0008795274,0.0013817643,0.000052894233,0.00001837894,0.000012659541,0.00031752008,0.000060306604,0.0006516021],"genre_scores_gemma":[0.9953347,0.00078071334,0.001007672,0.000043924654,0.000005825754,0.00002595564,0.00039721827,0.000019481635,0.0023846237],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998746,0.000013489334,0.0000110869905,0.00004193062,0.00003057097,0.000028327828],"domain_scores_gemma":[0.99978584,0.00003583186,0.000084071326,0.000031394433,0.000019313626,0.00004358515],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009859071,0.00023471784,0.00017892456,0.00045043536,0.000113355054,0.0001916903,0.00018250925,0.00022735662,0.0024049275],"category_scores_gemma":[0.0001729958,0.00015773678,0.00017746216,0.000111957794,0.00027326745,0.00014166845,0.0002748957,0.0004826316,0.0002529667],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00016774375,0.000019452038,0.0018912253,0.000016820582,0.0000069922567,0.00012613177,0.000033177348,0.000017012026,0.99561834,0.000059598442,0.00002053814,0.002023053],"study_design_scores_gemma":[0.000010751574,0.0005711401,0.08249419,0.000014771437,0.000034156867,0.001040238,0.00013955611,0.0002699003,0.91416204,0.000109987704,0.0011462283,0.0000070012093],"about_ca_topic_score_codex":0.00081453397,"about_ca_topic_score_gemma":0.0018236699,"teacher_disagreement_score":0.0024049275,"about_ca_system_score_codex":0.00024310789,"about_ca_system_score_gemma":0.00019227552,"threshold_uncertainty_score":0.008045316},"labels":[],"label_agreement":null},{"id":"W3193863613","doi":"10.1186/s13148-021-01150-1","title":"Epigenetic age is associated with baseline and 3-year change in frailty in the Canadian Longitudinal Study on Aging","year":2021,"lang":"en","type":"article","venue":"Clinical Epigenetics","topic":"Epigenetics and DNA Methylation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":57,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"McMaster University; NOSM University; University of British Columbia; Impact; BC Children's Hospital; Health Sciences North","funders":"Institute of Aging; Canadian Institutes of Health Research; Government of Canada","keywords":"Epigenetics; Frailty Index; Gerontology; Demography; Healthy aging; Medicine; Longitudinal study; Biological age; Biology; Genetics","score_opus":0.17441297467758862,"score_gpt":0.40692506840514336,"score_spread":0.23251209372755474,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3193863613","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9926058,0.000758893,0.00024866086,0.00038204997,0.00003206941,0.00002512406,0.0044657504,0.000014917318,0.001466664],"genre_scores_gemma":[0.9969394,0.00022818404,0.00022198044,0.00006535182,0.0000070105943,0.000015173691,0.0019017957,0.0000055960536,0.0006155049],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9988959,0.00012085532,0.00006878043,0.00026039977,0.0003709115,0.0002830516],"domain_scores_gemma":[0.9973635,0.00014582441,0.00048487418,0.00025090264,0.0012678897,0.00048696087],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0016963135,0.00043594814,0.00041014908,0.00090523215,0.0017493974,0.0008165549,0.0013991772,0.0006096901,0.0021928456],"category_scores_gemma":[0.005013697,0.00020311822,0.00091378833,0.0019968706,0.0004490027,0.0003494221,0.0010039691,0.0009069835,0.00019524829],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013336743,0.00001950538,0.9952922,0.000018192373,0.00013362612,0.000012874784,0.00026079474,0.00007923326,0.00012487841,0.000070200986,0.0007403987,0.003114755],"study_design_scores_gemma":[0.0000038957705,0.0000092937225,0.9993144,0.000007811961,0.00002892636,0.000008645725,0.00014326876,0.00016683352,0.000025941368,0.000020755588,0.00026443801,0.0000057823268],"about_ca_topic_score_codex":0.96397537,"about_ca_topic_score_gemma":0.97716194,"teacher_disagreement_score":0.03602463,"about_ca_system_score_codex":0.007384382,"about_ca_system_score_gemma":0.008663364,"threshold_uncertainty_score":0.072473526},"labels":[],"label_agreement":null},{"id":"W3197330133","doi":"10.1186/s13148-021-01155-w","title":"Longitudinal analysis of individual cfDNA methylome patterns in metastatic prostate cancer","year":2021,"lang":"en","type":"article","venue":"Clinical Epigenetics","topic":"Epigenetics and DNA Methylation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":35,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Irish Cancer Society; International Development Research Centre; Science Foundation Ireland; Movember Foundation","keywords":"Prostate cancer; Human genetics; DNA methylation; Oncology; Cancer; Medicine; Biology; Bioinformatics; Internal medicine; Genetics; Gene; Gene expression","score_opus":0.07327042960434595,"score_gpt":0.4063898093366693,"score_spread":0.33311937973232336,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3197330133","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99682695,0.00059077947,0.0016078512,0.000043183205,0.0000036857537,0.000012198959,0.00061074866,0.000021252466,0.00028343216],"genre_scores_gemma":[0.99864906,0.0001010357,0.0005690171,0.00001639101,0.0000038217227,0.000014738557,0.00044380032,0.0000048223183,0.00019729265],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9998412,0.00003313435,0.0000079230995,0.000054874512,0.00003922325,0.00002372363],"domain_scores_gemma":[0.99945885,0.00013197825,0.00017357498,0.00005091841,0.00011245106,0.00007220579],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005155985,0.00010865358,0.00021223152,0.00038930777,0.00023227808,0.00027786085,0.00014286127,0.00019967981,0.0009536253],"category_scores_gemma":[0.0010889206,0.00010137189,0.0001445606,0.00038461256,0.000119789984,0.00016170516,0.00025841285,0.00029846965,0.00017314465],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0012270422,0.000065031876,0.8918644,0.00007654433,0.00014960606,0.0001397059,0.0004219895,0.000922153,0.07668367,0.00011342118,0.0003728469,0.027963545],"study_design_scores_gemma":[0.000009978424,0.00055502634,0.9786896,0.00001077362,0.00009833026,0.0006843916,0.00016339851,0.002260837,0.015675997,0.000154879,0.0016826056,0.000014237313],"about_ca_topic_score_codex":0.0017808193,"about_ca_topic_score_gemma":0.002136506,"teacher_disagreement_score":0.0017808193,"about_ca_system_score_codex":0.0002326256,"about_ca_system_score_gemma":0.00019904226,"threshold_uncertainty_score":0.0035408735},"labels":[],"label_agreement":null},{"id":"W3199341752","doi":"10.1186/s13148-021-01156-9","title":"DNA 5-hydroxymethylcytosine in pediatric central nervous system tumors may impact tumor classification and is a positive prognostic marker","year":2021,"lang":"en","type":"article","venue":"Clinical Epigenetics","topic":"Epigenetics and DNA Methylation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":19,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"National Institute of General Medical Sciences; Norris Cotton Cancer Center; National Cancer Institute; National Institutes of Health; Dartmouth College; Burroughs Wellcome Fund","keywords":"DNA methylation; Biology; Epigenome; CpG site; Epigenetics; Methylation; Glioma; Bisulfite sequencing; Brain tumor; Epigenomics; CTCF; 5-Hydroxymethylcytosine; Cancer research; Genetics; Pathology; Gene; Enhancer; Transcription factor; Medicine; Gene expression","score_opus":0.024336227202208977,"score_gpt":0.32851297303407023,"score_spread":0.3041767458318613,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3199341752","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99419266,0.0023861313,0.0012759228,0.00012823667,0.000016328608,0.000012928947,0.0011837111,0.000040323685,0.0007637029],"genre_scores_gemma":[0.9967759,0.00082786824,0.0011958171,0.00003371365,0.000013663936,0.000012246568,0.000933291,0.000012308543,0.00019519437],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9997501,0.000049756985,0.000021913094,0.00007368973,0.00006224708,0.000042303258],"domain_scores_gemma":[0.9986725,0.0003228553,0.0006821823,0.00006187476,0.00015447129,0.000106144806],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00057574373,0.00025451503,0.0002572673,0.0006105955,0.00019711039,0.0004358979,0.00027886507,0.00033667602,0.0013968367],"category_scores_gemma":[0.001934876,0.00010170564,0.00022555159,0.0007975317,0.00023619864,0.00028661598,0.0003087331,0.0004542094,0.00024719493],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00026098717,0.00001432574,0.98291415,0.000042344687,0.000048281505,0.00008772534,0.000045057335,0.00035291247,0.004226499,0.000056810142,0.00025376448,0.011697086],"study_design_scores_gemma":[0.0000043480004,0.00009919104,0.99271977,0.000021918995,0.000084121435,0.0005574011,0.00008188847,0.0012556292,0.0040779863,0.0001445669,0.00094799034,0.000005147885],"about_ca_topic_score_codex":0.0034315865,"about_ca_topic_score_gemma":0.005814623,"teacher_disagreement_score":0.0034315865,"about_ca_system_score_codex":0.00064820214,"about_ca_system_score_gemma":0.00043115718,"threshold_uncertainty_score":0.0068232417},"labels":[],"label_agreement":null},{"id":"W4200427615","doi":"10.1186/s13148-021-01209-z","title":"DNA methylation mediates the association between breastfeeding and early-life growth trajectories","year":2021,"lang":"en","type":"article","venue":"Clinical Epigenetics","topic":"Epigenetics and DNA Methylation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":44,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Centre Intégré Universitaire de Santé et de Services Sociaux du Saguenay–Lac-Saint-Jean; Université de Sherbrooke; Centre Hospitalier Universitaire de Sherbrooke; Sinai Health System; University of Toronto; The Scarborough Hospital; Public Health Ontario; Lunenfeld-Tanenbaum Research Institute","funders":"Eunice Kennedy Shriver National Institute of Child Health and Human Development; Biotechnology and Biological Sciences Research Council; Wellcome; Medical Research Council; Canadian Institutes of Health Research; Wellcome Trust","keywords":"DNA methylation; Human genetics; Breastfeeding; Association (psychology); Genetics; Biology; DNA; Methylation; Reproductive medicine; Medicine; Bioinformatics; Computational biology; Gene; Psychology; Pregnancy; Pathology","score_opus":0.032898501565207926,"score_gpt":0.3189350223057626,"score_spread":0.2860365207405547,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4200427615","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9909519,0.0034133657,0.0022475088,0.00024741812,0.000017958531,0.000010388605,0.0018645837,0.000038745427,0.0012081511],"genre_scores_gemma":[0.99668556,0.0008988267,0.0011671446,0.00005348744,0.0000099957,0.00001688399,0.0006898589,0.000013911697,0.0004644205],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99974555,0.000065284185,0.000014309079,0.00009245534,0.00003172619,0.00005075419],"domain_scores_gemma":[0.99947625,0.00014565415,0.00021274605,0.00004010018,0.00006759724,0.000057624115],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00041796494,0.00021882486,0.00023635587,0.0003341059,0.00017986346,0.00036166518,0.00018717852,0.00026674784,0.0019293828],"category_scores_gemma":[0.0013429584,0.00019375095,0.0002761458,0.00037039508,0.0001506194,0.000168457,0.00036690614,0.0003792788,0.0002162624],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0007585573,0.000046457648,0.9265203,0.0001967954,0.0004768078,0.00015222914,0.00034099256,0.00037333582,0.045410402,0.00034587816,0.0003904582,0.02498794],"study_design_scores_gemma":[0.0000045009683,0.000068774316,0.9945015,0.000030786006,0.00008787381,0.00014345217,0.000096128366,0.00057685055,0.0032150385,0.00034162533,0.00092745246,0.000006012792],"about_ca_topic_score_codex":0.004476369,"about_ca_topic_score_gemma":0.0063866465,"teacher_disagreement_score":0.004476369,"about_ca_system_score_codex":0.00022135202,"about_ca_system_score_gemma":0.0003301304,"threshold_uncertainty_score":0.008900642},"labels":[],"label_agreement":null},{"id":"W4210838790","doi":"10.1186/s13148-022-01241-7","title":"The applications of DNA methylation as a biomarker in kidney transplantation: a systematic review","year":2022,"lang":"en","type":"review","venue":"Clinical Epigenetics","topic":"Epigenetics and DNA Methylation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":13,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"Regione del Veneto","keywords":"DNA methylation; Biomarker; Epigenetics; Kidney transplantation; Transplantation; Medicine; Methylation; Kidney; Bioinformatics; Biology; Immunology; Oncology; Cancer research; Internal medicine; Gene expression; Gene; Genetics","score_opus":0.07603852368784401,"score_gpt":0.4220259007580308,"score_spread":0.3459873770701868,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4210838790","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0010913035,0.99818194,0.000084856,0.0001577955,0.000039627077,0.000064931744,0.00027348186,0.0000028357204,0.00010319793],"genre_scores_gemma":[0.02003228,0.9786558,0.00041584572,0.00033154665,0.00007358922,0.0002172684,0.00023019705,0.0000029166033,0.00004052886],"study_design_codex":"systematic_review","study_design_gemma":"systematic_review","domain_scores_codex":[0.99319565,0.0024024125,0.0024638893,0.00060986925,0.0011581092,0.0001701561],"domain_scores_gemma":[0.9636179,0.027416948,0.005857583,0.0004524039,0.0023485958,0.0003066512],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0070394357,0.0010970796,0.0066408147,0.010415989,0.00045182006,0.0015808896,0.0015851242,0.0015411855,0.0020978854],"category_scores_gemma":[0.030577978,0.0006221786,0.005769903,0.013718364,0.0007687302,0.001687606,0.0010717803,0.0007151221,0.00015705122],"study_design_candidate":"systematic_review","study_design_consensus":"systematic_review","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000280227,0.000015101571,0.005408855,0.92913306,0.01504137,0.00011329582,0.00016271215,0.00016093173,0.00019841548,0.00017053843,0.0014266704,0.047888827],"study_design_scores_gemma":[0.00022310953,0.00028512286,0.027717367,0.8103274,0.13939844,0.0007799648,0.00031660203,0.0002609803,0.00033904382,0.00038327614,0.019902706,0.00006590779],"about_ca_topic_score_codex":0.006468284,"about_ca_topic_score_gemma":0.015163485,"teacher_disagreement_score":0.010415989,"about_ca_system_score_codex":0.0023702832,"about_ca_system_score_gemma":0.007301814,"threshold_uncertainty_score":0.037228584},"labels":[],"label_agreement":null},{"id":"W4224248052","doi":"10.1186/s13148-022-01271-1","title":"Epimutations in both the TESK2 and MMACHC promoters in the Epi-cblC inherited disorder of intracellular metabolism of vitamin B12","year":2022,"lang":"en","type":"article","venue":"Clinical Epigenetics","topic":"Folate and B Vitamins Research","field":"Medicine","cited_by":14,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; McGill University Health Centre","funders":"European Regional Development Fund; Canadian Institutes of Health Research; Institut National de la Santé et de la Recherche Médicale; Agence Nationale de la Recherche; Centre National de la Recherche Scientifique; Université de Lorraine; McGill University","keywords":"Biology; Genetics; Epigenetics; DNA methylation; Promoter; Gene; Gene expression","score_opus":0.04699089608055756,"score_gpt":0.3730046741331919,"score_spread":0.3260137780526343,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4224248052","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9987979,0.00012424348,0.0006225883,0.000011557326,0.000001387872,0.0000068500685,0.00014702391,0.000011873255,0.00027644096],"genre_scores_gemma":[0.99908674,0.000050622886,0.0005150821,0.000008842468,0.0000020343339,0.000005427799,0.0001193945,0.0000055788482,0.00020625842],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998851,0.000009757947,0.000010627049,0.000045175402,0.000030391062,0.00001895264],"domain_scores_gemma":[0.99986017,0.00002671948,0.00005115042,0.00001325875,0.000015595711,0.00003312041],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009969056,0.00025332926,0.00016561692,0.00066846213,0.0002040743,0.00016197258,0.00014801646,0.00028764582,0.0017300055],"category_scores_gemma":[0.00026717442,0.00011622616,0.00018891251,0.00034497667,0.00027909543,0.00008942017,0.00024590956,0.00020387396,0.00013047298],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0010724982,0.00006209236,0.27895102,0.000106201616,0.00009377339,0.024869677,0.0005141156,0.00054756587,0.6816639,0.00027194785,0.0001426988,0.011704627],"study_design_scores_gemma":[0.000045165812,0.00026655622,0.6667168,0.000032898024,0.00021814107,0.10834139,0.0003390617,0.0018100481,0.21916208,0.00028312916,0.0027618632,0.000022872577],"about_ca_topic_score_codex":0.0012217002,"about_ca_topic_score_gemma":0.0018956519,"teacher_disagreement_score":0.0017300055,"about_ca_system_score_codex":0.00023163781,"about_ca_system_score_gemma":0.00014474902,"threshold_uncertainty_score":0.005787432},"labels":[],"label_agreement":null},{"id":"W4225518108","doi":"10.1186/s13148-022-01268-w","title":"Epigenome-wide contributions to individual differences in childhood phenotypes: a GREML approach","year":2022,"lang":"en","type":"article","venue":"Clinical Epigenetics","topic":"Epigenetics and DNA Methylation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Jewish General Hospital","funders":"Eunice Kennedy Shriver National Institute of Child Health and Human Development; H2020 Marie Skłodowska-Curie Actions; Economic and Social Research Council; Medical Research Council; Horizon 2020; Canadian Institutes of Health Research; ZonMw; Wellcome Trust; Nederlandse Organisatie voor Wetenschappelijk Onderzoek; Biotechnology and Biological Sciences Research Council; Erasmus Universiteit Rotterdam","keywords":"Epigenome; Human genetics; Phenotype; Computational biology; Biology; Bioinformatics; Genetics; Medicine; DNA methylation; Gene","score_opus":0.03759920215336466,"score_gpt":0.3329551804845823,"score_spread":0.29535597833121763,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4225518108","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.14970812,0.0008335316,0.8412731,0.0009215675,0.000072443596,0.00018433749,0.0038602885,0.0022885306,0.00085809437],"genre_scores_gemma":[0.6629101,0.00027282638,0.32527265,0.000608198,0.00010691027,0.0008890716,0.007279663,0.00056152325,0.0020990898],"study_design_codex":"simulation_or_modeling","study_design_gemma":"observational","domain_scores_codex":[0.9866088,0.010615507,0.00032140574,0.0019107714,0.0003513288,0.0001921485],"domain_scores_gemma":[0.9505126,0.04225511,0.0013420138,0.004667872,0.0009873396,0.0002350648],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.024268981,0.0013520535,0.001324854,0.002681668,0.00082450453,0.0018406512,0.0032103823,0.0021022232,0.004063],"category_scores_gemma":[0.056454565,0.0007692365,0.00373205,0.0019168559,0.0013394138,0.00082559814,0.0022170711,0.0028747004,0.0008128068],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0018562054,0.00031465714,0.33655077,0.0006515229,0.0090412,0.0016065497,0.0014773408,0.40886074,0.009230103,0.023803273,0.0070380582,0.1995696],"study_design_scores_gemma":[0.0001296457,0.00026509992,0.047792125,0.00012087374,0.00078168436,0.00054639956,0.00017351871,0.9116881,0.0023288182,0.030433515,0.005665274,0.00007496694],"about_ca_topic_score_codex":0.0079385005,"about_ca_topic_score_gemma":0.005374566,"teacher_disagreement_score":0.024268981,"about_ca_system_score_codex":0.00087336224,"about_ca_system_score_gemma":0.00075207464,"threshold_uncertainty_score":0.12834817},"labels":[],"label_agreement":null},{"id":"W4280535517","doi":"10.1186/s13148-022-01282-y","title":"Folic acid intervention during pregnancy alters DNA methylation, affecting neural target genes through two distinct mechanisms","year":2022,"lang":"en","type":"article","venue":"Clinical Epigenetics","topic":"Epigenetics and DNA Methylation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":46,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"BC Children's Hospital; University of British Columbia","funders":"Biotechnology and Biological Sciences Research Council; Directorate for Biological Sciences; Economic and Social Research Council; Public Health Agency; Joint Programming Initiative A healthy diet for a healthy life","keywords":"DNA methylation; Human genetics; Folic acid; Gene; Pregnancy; Genetics; Biology; DNA; Bioinformatics; Methylation; Medicine; Computational biology; Internal medicine; Gene expression","score_opus":0.036513737533595395,"score_gpt":0.35226520441710146,"score_spread":0.3157514668835061,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4280535517","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9869811,0.007002762,0.0035276094,0.00036423653,0.000027602098,0.00003972849,0.00077987945,0.00006394745,0.0012131467],"genre_scores_gemma":[0.9929563,0.0026741903,0.0028407434,0.00012993145,0.000009676938,0.000049239155,0.00027213732,0.000009138589,0.0010585915],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9998516,0.000030682364,0.000009893489,0.000050044444,0.00003381326,0.000023982797],"domain_scores_gemma":[0.999853,0.00004533061,0.000055815384,0.000014654009,0.00001628867,0.000014924177],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00020400989,0.00023217445,0.0002430131,0.000213324,0.00011957178,0.00022020539,0.00015130125,0.00039727637,0.0009919793],"category_scores_gemma":[0.0005382026,0.00012436628,0.00018979955,0.00014414711,0.000244418,0.00009955928,0.00018266439,0.00029669362,0.00008965445],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0023854973,0.000043446802,0.021743486,0.00023788532,0.00013028702,0.00017978546,0.00017204335,0.000117294956,0.9493222,0.00016872474,0.00011292459,0.02538642],"study_design_scores_gemma":[0.00013509397,0.0020999822,0.4368727,0.00012713946,0.00039699324,0.0010128851,0.00017695996,0.0008158079,0.5530053,0.0005183964,0.0048188823,0.000019825198],"about_ca_topic_score_codex":0.0027719988,"about_ca_topic_score_gemma":0.0037912126,"teacher_disagreement_score":0.0027719988,"about_ca_system_score_codex":0.00029437026,"about_ca_system_score_gemma":0.00026992784,"threshold_uncertainty_score":0.005511701},"labels":[],"label_agreement":null},{"id":"W4280625646","doi":"10.1186/s13148-022-01281-z","title":"Differentially methylated CpGs in response to growth hormone administration in children with idiopathic short stature","year":2022,"lang":"en","type":"article","venue":"Clinical Epigenetics","topic":"Growth Hormone and Insulin-like Growth Factors","field":"Medicine","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; McGill Genome Centre; National Research Council Canada","funders":"Canadian Institutes of Health Research; Agence Nationale de la Recherche; National Research Council Canada; Compute Canada; McGill University","keywords":"DNA methylation; Epigenetics; Biology; Methylation; Short stature; CpG site; Idiopathic short stature; Human genetics; Endocrinology; PI3K/AKT/mTOR pathway; Genetics; Internal medicine; Signal transduction; Gene; Medicine; Hormone; Gene expression; Growth hormone","score_opus":0.025554657678214222,"score_gpt":0.31998755699933684,"score_spread":0.2944328993211226,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4280625646","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9960349,0.0009177552,0.0008556638,0.000040536645,0.0000058661312,0.000008702599,0.0018148527,0.000024564359,0.00029714275],"genre_scores_gemma":[0.99758005,0.00019975023,0.00083536375,0.000042452488,0.0000044294507,0.000020077994,0.0010351621,0.000010944861,0.00027171447],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9997938,0.000033219152,0.000013284804,0.0000808561,0.000040839725,0.00003797511],"domain_scores_gemma":[0.9997135,0.000098846394,0.00010094219,0.000017176879,0.000038136022,0.00003134636],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00016022129,0.00018061275,0.0002688963,0.00049987395,0.00015642933,0.00015203594,0.00016587312,0.00022119569,0.0013339282],"category_scores_gemma":[0.0005687046,0.000096721145,0.00020091124,0.0006205711,0.00016943192,0.00008257933,0.0002110804,0.00020550321,0.0001279828],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0015868586,0.000035544508,0.7889604,0.0002704843,0.00032470783,0.00052793464,0.00068835466,0.0007822694,0.17434965,0.00011519343,0.0005240061,0.03183465],"study_design_scores_gemma":[0.000008769272,0.00011918827,0.989389,0.0000108523445,0.00008749288,0.0006126139,0.00018051072,0.00062322244,0.008017478,0.000097446326,0.0008463518,0.0000071278328],"about_ca_topic_score_codex":0.0035265423,"about_ca_topic_score_gemma":0.0061979163,"teacher_disagreement_score":0.0035265423,"about_ca_system_score_codex":0.00020749358,"about_ca_system_score_gemma":0.00017451521,"threshold_uncertainty_score":0.0070120096},"labels":[],"label_agreement":null},{"id":"W4283317994","doi":"10.1186/s13148-022-01296-6","title":"Maternal epigenetic clocks measured during pregnancy do not predict gestational age at delivery or offspring birth outcomes: a replication study in metropolitan Cebu, Philippines","year":2022,"lang":"en","type":"article","venue":"Clinical Epigenetics","topic":"Birth, Development, and Health","field":"Medicine","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"BC Children's Hospital; iCo Therapeutics (Canada); University of British Columbia","funders":"Canadian Institutes of Health Research; National Institute on Aging; National Science Foundation","keywords":"Offspring; Epigenetics; Pregnancy; Gestational age; Birth weight; Reproductive medicine; Demography; Medicine; Live birth; Obstetrics; Biology; Genetics","score_opus":0.10806156795789655,"score_gpt":0.3844887306532039,"score_spread":0.2764271626953073,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4283317994","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":"reproducibility","model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":"reproducibility","domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9990121,0.00010837162,0.00032936866,0.00005274997,0.0000056336858,0.00004518342,0.00024209716,0.000007332717,0.00019712717],"genre_scores_gemma":[0.99895346,0.00008010908,0.0003604687,0.00005123863,0.0000050128947,0.000119760116,0.00021692416,0.0000053490894,0.00020758393],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99926,0.0003775716,0.000044386732,0.00015120236,0.00006026839,0.00010648534],"domain_scores_gemma":[0.99858546,0.00027370304,0.00028130057,0.00045370287,0.0002831615,0.00012268152],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.0020476533,0.00080433453,0.00040151182,0.0004420596,0.0011958765,0.0004762625,0.00081672176,0.00039287476,0.00079192384],"category_scores_gemma":[0.0048087095,0.00034682467,0.00047127923,0.0007033153,0.0006784297,0.00035191164,0.00058695447,0.0005777951,0.00017650599],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0004695879,0.00020229486,0.9816378,0.00009625096,0.0002796076,0.0009931321,0.0053761583,0.00009211348,0.0034335447,0.000094249874,0.0003985643,0.006926719],"study_design_scores_gemma":[0.000037418584,0.0003842606,0.99563617,0.000024957739,0.0001526168,0.00029146305,0.0020607738,0.00022715451,0.00041741575,0.000041388193,0.0007162337,0.000010037008],"about_ca_topic_score_codex":0.07952041,"about_ca_topic_score_gemma":0.07880667,"teacher_disagreement_score":0.99795234,"about_ca_system_score_codex":0.0008324598,"about_ca_system_score_gemma":0.0011937864,"threshold_uncertainty_score":0.15811509},"labels":[],"label_agreement":null},{"id":"W4294311618","doi":"10.1186/s13148-022-01322-7","title":"Researcher perspectives on ethics considerations in epigenetics: an international survey","year":2022,"lang":"en","type":"article","venue":"Clinical Epigenetics","topic":"Epigenetics and DNA Methylation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":20,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; McGill University","funders":"Canadian Institutes of Health Research; National Institute for Health and Care Research; McGill University","keywords":"Epigenetics; Scope (computer science); Engineering ethics; Social media; Political science; Sociology; Biology; Genetics; Law; Computer science; Engineering","score_opus":0.2489162454954624,"score_gpt":0.48797993704633147,"score_spread":0.23906369155086907,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4294311618","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":"methods","model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":"methods","domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9087647,0.0113098975,0.0019281295,0.056657374,0.0005007604,0.00017020089,0.00025260198,0.000025027326,0.020391297],"genre_scores_gemma":[0.97875196,0.009477364,0.0007430767,0.009283557,0.00021015262,0.00016039661,0.00009012093,0.00003045623,0.0012530204],"study_design_codex":"qualitative","study_design_gemma":"observational","domain_scores_codex":[0.94097006,0.04615707,0.004047613,0.0015566308,0.0042101885,0.0030584517],"domain_scores_gemma":[0.8187391,0.13478081,0.022562532,0.0029777207,0.012029268,0.008910521],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.06342041,0.0003635641,0.0006977618,0.0040428997,0.0049967696,0.00791736,0.0010060775,0.0029659593,0.004059941],"category_scores_gemma":[0.106422804,0.00081512757,0.0007036575,0.004252426,0.007218066,0.0070939157,0.00783794,0.0040524206,0.0005925462],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011052042,0.000095696,0.12625192,0.00077016494,0.0000564094,0.0013428123,0.83029705,0.00009961301,0.0008122943,0.0074130706,0.0044465913,0.028303862],"study_design_scores_gemma":[0.000010356494,0.000105567655,0.021870475,0.0010018159,0.000019059502,0.0010284674,0.9342517,0.0001280303,0.00019197569,0.0009157723,0.040436614,0.0000401189],"about_ca_topic_score_codex":0.0028665003,"about_ca_topic_score_gemma":0.0024542292,"teacher_disagreement_score":0.9365796,"about_ca_system_score_codex":0.0032539216,"about_ca_system_score_gemma":0.0053278697,"threshold_uncertainty_score":0.33540314},"labels":[],"label_agreement":null},{"id":"W4297493881","doi":"10.1186/s13148-022-01339-y","title":"Correction: Identification of a novel quinoline-based DNA demethylating compound highly potent in cancer cells","year":2022,"lang":"en","type":"erratum","venue":"Clinical Epigenetics","topic":"Epigenetics and DNA Methylation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":4,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Simon Fraser University","funders":"","keywords":"Identification (biology); Computational biology; Human genetics; Quinoline; Cancer; Bioinformatics; Medicine; Biology; Genetics; Internal medicine; Chemistry; Gene","score_opus":0.0546536578171235,"score_gpt":0.3642188811087741,"score_spread":0.3095652232916506,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4297493881","genre_codex":"editorial","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00068499206,0.0019992427,0.0020446342,0.05180814,0.93736196,0.00004583112,0.001588648,0.00061377237,0.0038527537],"genre_scores_gemma":[0.05317515,0.016785745,0.02060666,0.09433245,0.24108218,0.00039782954,0.0050028968,0.002636101,0.565981],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9980063,0.0002557882,0.00028313982,0.00030057522,0.0009183543,0.00023583758],"domain_scores_gemma":[0.9914513,0.0020124314,0.00054388755,0.00058768236,0.004578717,0.00082597253],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0022725426,0.0018314875,0.0017495396,0.0019643193,0.0020927675,0.0020635899,0.0032814636,0.007342221,0.042763658],"category_scores_gemma":[0.02241696,0.000911148,0.0013247473,0.0012955107,0.0018052206,0.0014485635,0.0014354269,0.007780765,0.023142952],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00019188556,0.000018184248,0.00013914674,0.00041065534,0.000043684777,0.0023128395,0.000044902743,0.00015124818,0.00096144096,0.0015040212,0.98102164,0.013200294],"study_design_scores_gemma":[0.00012091811,0.000060907118,0.0007735316,0.00018637242,0.000106085216,0.0032598188,0.00006751687,0.00040582372,0.0040820083,0.0013877874,0.98950046,0.00004881556],"about_ca_topic_score_codex":0.007995933,"about_ca_topic_score_gemma":0.008410786,"teacher_disagreement_score":0.042763658,"about_ca_system_score_codex":0.0027672853,"about_ca_system_score_gemma":0.0035067296,"threshold_uncertainty_score":0.14305866},"labels":[],"label_agreement":null},{"id":"W4308636364","doi":"10.1186/s13148-022-01358-9","title":"First step towards a consensus strategy for multi-locus diagnostic testing of imprinting disorders","year":2022,"lang":"en","type":"article","venue":"Clinical Epigenetics","topic":"Genetic Syndromes and Imprinting","field":"Biochemistry, Genetics and Molecular Biology","cited_by":34,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Institute of Genetics; Det Sundhedsvidenskabelige Fakultet, Københavns Universitet; Istituto Auxologico Italiano; Ministero dell'Università e della Ricerca; RWTH Aachen University; Gentofte Hospital; Instituto de Salud Carlos III; Rigshospitalet; University of Exeter; Faculty of Health and Medical Sciences, University of Western Australia; Universität Hamburg; University Hospital Southampton NHS Foundation Trust; Diabetes UK; National Institute for Health and Care Research; Wellcome Trust; Japan Agency for Medical Research and Development","keywords":"Imprinting (psychology); Locus (genetics); Human genetics; Genomic imprinting; Diagnostic test; Medicine; Genetics; Biology; Pediatrics; Gene","score_opus":0.0947107233993399,"score_gpt":0.3618741946444731,"score_spread":0.26716347124513323,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4308636364","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.008713652,0.024318533,0.69362277,0.24517314,0.008588559,0.0030350443,0.0004799777,0.0034411256,0.0126271285],"genre_scores_gemma":[0.03408998,0.005776622,0.917147,0.03239665,0.0043781595,0.0021933813,0.00089650153,0.00039728347,0.002724377],"study_design_codex":"design_other","study_design_gemma":"theoretical_or_conceptual","domain_scores_codex":[0.9065787,0.043774325,0.017184105,0.0070539326,0.022108607,0.0033003753],"domain_scores_gemma":[0.6231102,0.08044516,0.013912134,0.029262397,0.2248663,0.028403845],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.19092247,0.003158896,0.003984321,0.015869776,0.0037511666,0.011367554,0.016584855,0.014291947,0.0061876127],"category_scores_gemma":[0.16444327,0.0022074254,0.0036204003,0.005155909,0.00490772,0.011549578,0.017923025,0.022524565,0.006345566],"study_design_candidate":"theoretical_or_conceptual","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00046939813,0.0013477319,0.030588528,0.004167268,0.0009316877,0.0055897906,0.0036488983,0.005564643,0.0069465134,0.021281812,0.19798777,0.7214761],"study_design_scores_gemma":[0.001088249,0.0027663934,0.04117974,0.021997003,0.0018319092,0.024011865,0.012112037,0.03859779,0.018725941,0.1810339,0.6553879,0.0012674575],"about_ca_topic_score_codex":0.0044380357,"about_ca_topic_score_gemma":0.0063888533,"teacher_disagreement_score":0.19092247,"about_ca_system_score_codex":0.0074158423,"about_ca_system_score_gemma":0.03869413,"threshold_uncertainty_score":0.99773663},"labels":[],"label_agreement":null},{"id":"W4311835442","doi":"10.1186/s13148-022-01396-3","title":"THOR is a targetable epigenetic biomarker with clinical implications in breast cancer","year":2022,"lang":"en","type":"article","venue":"Clinical Epigenetics","topic":"Epigenetics and DNA Methylation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":15,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"SickKids Foundation; University of Toronto; Hospital for Sick Children","funders":"Fundação para a Ciência e a Tecnologia; Centro de Investigação em Biomedicina; Liga Portuguesa Contra o Cancro; Canadian Cancer Society Research Institute; Canadian Institutes of Health Research; Hospital for Sick Children","keywords":"Breast cancer; Biomarker; Epigenetics; Human genetics; Medicine; Cancer; Oncology; Bioinformatics; Internal medicine; Biology; Computational biology; Genetics; Gene","score_opus":0.061108530932352106,"score_gpt":0.39998078423973843,"score_spread":0.33887225330738635,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4311835442","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9132994,0.06031703,0.014294553,0.0014925062,0.00022068426,0.00010004577,0.003749018,0.00034005716,0.0061867535],"genre_scores_gemma":[0.98260325,0.0062504946,0.0069463025,0.0003536988,0.00010420576,0.00005624123,0.0014765164,0.00002578917,0.0021833573],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9996202,0.000071602706,0.000024843339,0.000108903114,0.00013502137,0.000039485563],"domain_scores_gemma":[0.9994168,0.00017996928,0.00022081233,0.000036750003,0.00010834007,0.000037364778],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007895906,0.00027966546,0.00038854752,0.00061029824,0.00016314766,0.00053347315,0.00030878844,0.00056215265,0.0017870144],"category_scores_gemma":[0.0011853204,0.00018293524,0.00027196007,0.00058166374,0.0003099337,0.00023178452,0.00033464303,0.0005101349,0.00042785835],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0020299961,0.00018633205,0.26484862,0.0017247933,0.0004143817,0.00054336316,0.00020580573,0.0024997888,0.5516724,0.00096326513,0.0024822308,0.17242901],"study_design_scores_gemma":[0.00008215458,0.0018380661,0.5859186,0.000255216,0.001084062,0.0055298023,0.00028105665,0.009700363,0.3580811,0.002919666,0.034240097,0.000069873255],"about_ca_topic_score_codex":0.0005104749,"about_ca_topic_score_gemma":0.0010626019,"teacher_disagreement_score":0.0017870144,"about_ca_system_score_codex":0.00034438717,"about_ca_system_score_gemma":0.00026774613,"threshold_uncertainty_score":0.0059781075},"labels":[],"label_agreement":null},{"id":"W4312129369","doi":"10.1186/s13148-022-01400-w","title":"Transient Polycomb activity represses developmental genes in growing oocytes","year":2022,"lang":"en","type":"article","venue":"Clinical Epigenetics","topic":"Reproductive Biology and Fertility","field":"Medicine","cited_by":12,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"BC Children's Hospital; University of British Columbia","funders":"National Health and Medical Research Council; State Government of Victoria; Hudson Institute of Medical Research; Monash University","keywords":"PRC2; Biology; Genomic imprinting; Epigenetics; Genetics; Germline; Oocyte; Histone; Gene; Polycomb-group proteins; Imprinting (psychology); Phenotype; Cell biology; Histone H3; Embryo; DNA methylation; Gene expression; Repressor","score_opus":0.09359001747846676,"score_gpt":0.37764912478814083,"score_spread":0.2840591073096741,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4312129369","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99063206,0.0022893643,0.0047935043,0.0000598352,0.000025458592,0.000023460667,0.0005813237,0.00008611241,0.0015086925],"genre_scores_gemma":[0.9921187,0.00080024335,0.0025647809,0.00003919512,0.000013581975,0.000028475679,0.00092815823,0.000039329243,0.0034674688],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99989784,0.000006710367,0.000010579405,0.00003689506,0.000028504744,0.000019505733],"domain_scores_gemma":[0.99987805,0.000021023037,0.000040796334,0.000017318462,0.000016822294,0.000025973555],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00008585775,0.0001870317,0.00014432467,0.00017318659,0.000110954614,0.00025775784,0.00020081816,0.00014805162,0.0009769631],"category_scores_gemma":[0.00012456116,0.00012911431,0.00020987948,0.00010420876,0.00020047322,0.00016288823,0.00019935716,0.00032785392,0.0003209876],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000028945706,0.0000022365875,0.00029583133,0.000012358933,0.0000016982119,0.000023218703,0.0000064163364,0.000007816723,0.99922585,0.000045567704,0.000008353114,0.0003417076],"study_design_scores_gemma":[0.000008292079,0.000085832755,0.012610043,0.0000038761996,0.000011695612,0.00034303483,0.000020083095,0.00033649814,0.98447937,0.00004691935,0.0020524366,0.0000018890744],"about_ca_topic_score_codex":0.00061387254,"about_ca_topic_score_gemma":0.0013756276,"teacher_disagreement_score":0.0009769631,"about_ca_system_score_codex":0.0003168423,"about_ca_system_score_gemma":0.00016122879,"threshold_uncertainty_score":0.0032682419},"labels":[],"label_agreement":null},{"id":"W4313299824","doi":"10.1186/s13148-022-01412-6","title":"Genome-wide placental DNA methylations in fetal overgrowth and associations with leptin, adiponectin and fetal growth factors","year":2022,"lang":"en","type":"article","venue":"Clinical Epigenetics","topic":"Gestational Diabetes Research and Management","field":"Medicine","cited_by":29,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Lunenfeld-Tanenbaum Research Institute; University of Toronto; Mount Sinai Hospital","funders":"Canadian Institutes of Health Research; Science and Technology Commission of Shanghai Municipality; Ministry of Science and Technology of the People's Republic of China; National Natural Science Foundation of China; Shanghai Municipal Health Commission","keywords":"DNA methylation; Biology; Epigenome; Fetus; Epigenetics; Endocrinology; Internal medicine; Placenta; Adiponectin; Differentially methylated regions; Gestational diabetes; Pregnancy; Genetics; Gene; Diabetes mellitus; Medicine; Gene expression; Gestation; Insulin resistance","score_opus":0.03774217068086364,"score_gpt":0.32807421742526477,"score_spread":0.2903320467444011,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4313299824","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9972791,0.0009850556,0.000692642,0.000052237705,0.0000032133878,0.000002739648,0.00063829985,0.000011597816,0.00033508753],"genre_scores_gemma":[0.999092,0.00018269953,0.00027987373,0.000018153476,0.0000020257585,0.000005992344,0.00025869848,0.0000045050783,0.00015596389],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99982136,0.000039690723,0.000010442826,0.00007187657,0.00002992021,0.000026699438],"domain_scores_gemma":[0.99969625,0.00010332827,0.00012192475,0.000028225055,0.000022771883,0.000027576561],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00030269017,0.00019896428,0.00019409764,0.00036153832,0.00013048729,0.00025416102,0.00018341292,0.00021646911,0.0015789978],"category_scores_gemma":[0.0007894506,0.00012530548,0.00021761724,0.0004708356,0.0002045114,0.000101053585,0.00029390334,0.00026854785,0.00008991165],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0017240671,0.000020560523,0.89851636,0.00010248643,0.0004152989,0.00030471728,0.00036873238,0.0005987078,0.08087958,0.00016474251,0.0002455918,0.016659157],"study_design_scores_gemma":[0.0000069700486,0.000043320324,0.99563193,0.0000087505905,0.000089167115,0.00043942698,0.00006981861,0.0004253205,0.0027499595,0.00013198785,0.00040013448,0.000003282226],"about_ca_topic_score_codex":0.0028005727,"about_ca_topic_score_gemma":0.0023656513,"teacher_disagreement_score":0.0028005727,"about_ca_system_score_codex":0.000186351,"about_ca_system_score_gemma":0.00009078993,"threshold_uncertainty_score":0.005568564},"labels":[],"label_agreement":null},{"id":"W4313682117","doi":"10.1186/s13148-022-01417-1","title":"Sperm DNA methylome abnormalities occur both pre- and post-treatment in men with Hodgkin disease and testicular cancer","year":2023,"lang":"en","type":"article","venue":"Clinical Epigenetics","topic":"Epigenetics and DNA Methylation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":13,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill Genome Centre; McGill University; Jewish General Hospital; McGill University Health Centre","funders":"Canadian Institutes of Health Research; Génome Québec; Compute Canada; McGill University","keywords":"Human genetics; Testicular cancer; Disease; Reproductive medicine; DNA methylation; Cancer; Medicine; Sperm bank; Biology; Sperm; Oncology; Bioinformatics; Internal medicine; Physiology; Gynecology; Pregnancy; Genetics; Infertility; Gene","score_opus":0.027713623611437536,"score_gpt":0.3473643172754855,"score_spread":0.31965069366404797,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4313682117","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9972791,0.0018958873,0.00016035994,0.000039320275,0.000005312268,0.0000072334674,0.00032801708,0.0000095271835,0.00027520998],"genre_scores_gemma":[0.99912256,0.00026479043,0.00014068949,0.000028627464,0.000004793999,0.00000482024,0.00021837578,0.0000015473424,0.00021375352],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9998555,0.000036356654,0.000012775002,0.000040314713,0.000035059347,0.000020038971],"domain_scores_gemma":[0.99981874,0.00004560648,0.00007360882,0.000011901974,0.000028992368,0.000021198004],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00020220075,0.00010724377,0.00019354267,0.0004324276,0.00020496722,0.0002020485,0.00012903221,0.00023240391,0.0016171171],"category_scores_gemma":[0.0006239313,0.00012457826,0.00010912331,0.0005437023,0.00016031957,0.00013328421,0.00016082283,0.00015631334,0.0001232913],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0008305868,0.000033376193,0.97321147,0.0000758959,0.0001062244,0.00018610651,0.00024373442,0.000106538595,0.011751138,0.000030006517,0.00018533728,0.013239498],"study_design_scores_gemma":[0.000007624526,0.0002648929,0.9965663,0.0000059856834,0.00004759883,0.00055038626,0.000113706614,0.00009486791,0.0019322457,0.000020569187,0.00039308402,0.0000026630173],"about_ca_topic_score_codex":0.00251729,"about_ca_topic_score_gemma":0.004678537,"teacher_disagreement_score":0.00251729,"about_ca_system_score_codex":0.00022421704,"about_ca_system_score_gemma":0.00015385552,"threshold_uncertainty_score":0.005409777},"labels":[],"label_agreement":null},{"id":"W4320480698","doi":"10.1186/s13148-023-01435-7","title":"DNA methylation in peripheral blood leukocytes for the association with glucose metabolism and invasive breast cancer","year":2023,"lang":"en","type":"article","venue":"Clinical Epigenetics","topic":"Epigenetics and DNA Methylation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"National Institute of Nursing Research; University at Buffalo; MedStar Health Research Institute; Wake Forest University; University of Pittsburgh; Ohio State University; National Heart, Lung, and Blood Institute; Brigham and Women's Hospital; National Institutes of Health; U.S. Department of Health and Human Services","keywords":"Breast cancer; DNA methylation; Human genetics; Peripheral blood; Cancer; Medicine; Biology; Methylation; Bioinformatics; DNA; Oncology; Internal medicine; Physiology; Genetics; Gene","score_opus":0.027639171366762826,"score_gpt":0.32889177568272765,"score_spread":0.30125260431596484,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4320480698","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99428755,0.0012622417,0.0013978713,0.00015179199,0.000021828017,0.000018995353,0.0020835304,0.00005291307,0.00072330603],"genre_scores_gemma":[0.99813986,0.0001057729,0.00077729265,0.00004893836,0.000010802466,0.000019072695,0.000576242,0.000008585939,0.000313384],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9997322,0.00006454595,0.000019744286,0.00011028171,0.00003706442,0.000036166137],"domain_scores_gemma":[0.99948525,0.00016411801,0.00017539201,0.000051393912,0.000040517167,0.00008326326],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00037411076,0.00022388656,0.00025773596,0.0005077389,0.00029461875,0.0003636967,0.0002504882,0.00033532968,0.0032762305],"category_scores_gemma":[0.0012727397,0.00011769901,0.0004182573,0.0009754894,0.00014244896,0.00013628563,0.00021865821,0.00043562433,0.00022494937],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0009686227,0.000042716485,0.97796565,0.000054464483,0.00040664728,0.00012117007,0.00004506832,0.0002485921,0.008853595,0.000057092006,0.0004882423,0.01074814],"study_design_scores_gemma":[0.000021770868,0.0001400124,0.99545926,0.000011653882,0.00028675277,0.0003080001,0.000030819654,0.0009983594,0.0018326152,0.00017023728,0.0007353868,0.0000050386607],"about_ca_topic_score_codex":0.0021235805,"about_ca_topic_score_gemma":0.0033619215,"teacher_disagreement_score":0.0032762305,"about_ca_system_score_codex":0.00019418426,"about_ca_system_score_gemma":0.0002867726,"threshold_uncertainty_score":0.010960102},"labels":[],"label_agreement":null},{"id":"W4322719559","doi":"10.1186/s13148-023-01444-6","title":"DNA methylation as a potential mediator of the association between indoor air pollution and neurodevelopmental delay in a South African birth cohort","year":2023,"lang":"en","type":"article","venue":"Clinical Epigenetics","topic":"Epigenetics and DNA Methylation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":27,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"BC Children's Hospital; Pacific Centre for Reproductive Medicine; University of British Columbia","funders":"Eunice Kennedy Shriver National Institute of Child Health and Human Development; National Institute of Child Health and Human Development; National Institute of Environmental Health Sciences; Fogarty International Center; National Institutes of Health; Medical Research Council; South African Medical Research Council; National Research Foundation; Bill and Melinda Gates Foundation","keywords":"dNaM; DNA methylation; Mediation; CpG site; Cognition; Pregnancy; Medicine; Epigenetics; Cohort; Toxicant; Methylation; Genetics; Biology; Internal medicine; Psychiatry; Gene","score_opus":0.018544941719953096,"score_gpt":0.29766490248133376,"score_spread":0.2791199607613807,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4322719559","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99902177,0.0003296974,0.00026407454,0.00006516896,0.0000035018872,0.0000049805,0.00017857309,0.0000034033767,0.00012888524],"genre_scores_gemma":[0.999617,0.00007937577,0.000121348894,0.000011088912,0.0000017943099,0.000006346983,0.000058013382,0.0000010574452,0.000103988314],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99961394,0.00015568417,0.00001761491,0.000108798835,0.00003759241,0.00006638022],"domain_scores_gemma":[0.99942774,0.0002505772,0.00016651543,0.00006109226,0.00003872277,0.000055335513],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009139578,0.0003924836,0.0002790321,0.0004852187,0.00043665664,0.000402317,0.00035161755,0.00032735048,0.0020846743],"category_scores_gemma":[0.0024121604,0.00021479535,0.0004292287,0.0006139463,0.00029551866,0.00017314614,0.0006589938,0.0004244213,0.00008538998],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00039778653,0.000035037796,0.9904006,0.000046512723,0.00038194135,0.00030186053,0.00048355595,0.00020955822,0.0040357504,0.00017330657,0.000102130034,0.003431904],"study_design_scores_gemma":[0.000024852525,0.00009022762,0.99677163,0.000019352212,0.00029080705,0.00019045471,0.00032791868,0.0009391355,0.00080306374,0.00019789017,0.0003388549,0.000005688894],"about_ca_topic_score_codex":0.015167139,"about_ca_topic_score_gemma":0.010434633,"teacher_disagreement_score":0.015167139,"about_ca_system_score_codex":0.0002769819,"about_ca_system_score_gemma":0.00044118942,"threshold_uncertainty_score":0.030157745},"labels":[],"label_agreement":null},{"id":"W4323928821","doi":"10.1186/s13148-023-01459-z","title":"A systematic evaluation of normalization methods and probe replicability using infinium EPIC methylation data","year":2023,"lang":"en","type":"article","venue":"Clinical Epigenetics","topic":"Epigenetics and DNA Methylation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":28,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"SickKids Foundation; Hospital for Sick Children; University of Toronto; Hatch (Canada)","funders":"Conselho Nacional de Desenvolvimento Científico e Tecnológico; Fundação de Amparo à Pesquisa do Estado de São Paulo","keywords":"Normalization (sociology); Intraclass correlation; Replicate; Statistics; Pearson product-moment correlation coefficient; Percentile; Reproducibility; EPIC; Correlation; Standard deviation; Mathematics","score_opus":0.3008041721586855,"score_gpt":0.5362390484390256,"score_spread":0.2354348762803401,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4323928821","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":"methods","model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":"methods","domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.14729123,0.03594943,0.79212385,0.0015149749,0.001363285,0.009354109,0.0034480814,0.0033085942,0.005646449],"genre_scores_gemma":[0.27594888,0.0065628123,0.6935749,0.0013125718,0.00028757213,0.012871169,0.0042704707,0.0029188506,0.002252787],"study_design_codex":"design_other","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.796696,0.11690658,0.02529728,0.018596385,0.04171296,0.0007908654],"domain_scores_gemma":[0.57166326,0.23716094,0.030847492,0.0751288,0.084035516,0.0011640134],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.26318008,0.0022057437,0.002338294,0.0045550843,0.002084081,0.0032038868,0.0032586514,0.0017804252,0.0014853857],"category_scores_gemma":[0.40206182,0.0014325223,0.0033351963,0.00455022,0.0034699272,0.0017002061,0.0033032605,0.0016036937,0.001058685],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0032414298,0.0005549507,0.1184851,0.021785408,0.010435437,0.0006217441,0.008528816,0.011182501,0.09457051,0.0072588567,0.014839941,0.7084954],"study_design_scores_gemma":[0.0010747707,0.008284647,0.28941235,0.01814258,0.017250486,0.0049882294,0.002260149,0.056699205,0.35011318,0.014018551,0.23635703,0.0013988641],"about_ca_topic_score_codex":0.0023550293,"about_ca_topic_score_gemma":0.0052089975,"teacher_disagreement_score":0.7368199,"about_ca_system_score_codex":0.0023777196,"about_ca_system_score_gemma":0.004536054,"threshold_uncertainty_score":0},"labels":[],"label_agreement":null},{"id":"W4376134282","doi":"10.1186/s13148-023-01497-7","title":"Capturing sex-specific and hypofertility-linked effects of assisted reproductive technologies on the cord blood DNA methylome","year":2023,"lang":"en","type":"article","venue":"Clinical Epigenetics","topic":"Assisted Reproductive Technology and Twin Pregnancy","field":"Medicine","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Université de Sherbrooke; Centre Hospitalier Universitaire Sainte-Justine; McGill Genome Centre; National Research Council Canada; University of Ottawa; Université de Montréal; McGill University Health Centre","funders":"Canadian Institutes of Health Research; McGill University","keywords":"DNA methylation; Epigenetics; Biology; Reproductive technology; Genomic imprinting; Intracytoplasmic sperm injection; Assisted reproductive technology; Epigenome; Reprogramming; Cord blood; Epigenomics; Human genetics; Population; Genetics; Bioinformatics; Andrology; In vitro fertilisation; Pregnancy; Infertility; Medicine; Gene","score_opus":0.07950694367043094,"score_gpt":0.3462906403932632,"score_spread":0.26678369672283225,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4376134282","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9924724,0.0013662947,0.0026430474,0.000049651328,0.000006788023,0.000026340364,0.0027884655,0.000031741078,0.00061536],"genre_scores_gemma":[0.9938765,0.0004949224,0.0028191912,0.00007371914,0.000006983753,0.000041822586,0.0021568045,0.000010990296,0.00051903323],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99975985,0.000045781235,0.00001436244,0.00008506823,0.0000618419,0.000032980304],"domain_scores_gemma":[0.99953735,0.00010599243,0.00018477124,0.000049137678,0.000076866716,0.00004582717],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00037405334,0.00021380438,0.00023142745,0.0006431588,0.00017980002,0.00029155484,0.0002325123,0.00022261239,0.0010358524],"category_scores_gemma":[0.0009460399,0.00012360785,0.00021300754,0.000716834,0.00012951555,0.000070149836,0.0002891322,0.00019078644,0.00015549245],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00039894693,0.000029251252,0.87903666,0.00015905048,0.00031232001,0.0001574392,0.00020690178,0.0004111148,0.09860571,0.000093277056,0.0003195021,0.020270001],"study_design_scores_gemma":[0.000006675946,0.00013517245,0.97900087,0.0000149833095,0.00012996717,0.00049873756,0.00006178827,0.0006669431,0.01831484,0.0000905248,0.0010732006,0.0000064163387],"about_ca_topic_score_codex":0.0043218434,"about_ca_topic_score_gemma":0.008312641,"teacher_disagreement_score":0.0043218434,"about_ca_system_score_codex":0.00023099294,"about_ca_system_score_gemma":0.00024338806,"threshold_uncertainty_score":0.00859338},"labels":[],"label_agreement":null},{"id":"W4379207264","doi":"10.1186/s13148-023-01513-w","title":"Novel insights into systemic sclerosis using a sensitive computational method to analyze whole-genome bisulfite sequencing data","year":2023,"lang":"en","type":"article","venue":"Clinical Epigenetics","topic":"Systemic Sclerosis and Related Diseases","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan; McGill University Health Centre; Jewish General Hospital; McGill University","funders":"Lady Davis Institute for Medical Research; Canadian Institutes of Health Research; Fonds de Recherche du Québec - Santé; Genome Canada","keywords":"Computational biology; Human genetics; Genome; Whole genome sequencing; Biology; Bioinformatics; Genetics; Gene","score_opus":0.2757785640411662,"score_gpt":0.4335411100768395,"score_spread":0.1577625460356733,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4379207264","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.10179143,0.00030599989,0.8913322,0.00033704608,0.000060978527,0.00013973362,0.0013271169,0.0033107356,0.0013948464],"genre_scores_gemma":[0.26219913,0.00026277735,0.73310035,0.00016642034,0.000050441493,0.00040249457,0.0024313529,0.00034412692,0.0010429411],"study_design_codex":"simulation_or_modeling","study_design_gemma":"simulation_or_modeling","domain_scores_codex":[0.9996495,0.00010913504,0.000019071438,0.0000989844,0.000101350495,0.000021956072],"domain_scores_gemma":[0.99893445,0.0007375935,0.00009261082,0.00007213618,0.00011245209,0.000050718238],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0015884837,0.00078834407,0.00067088765,0.0016188202,0.00057571224,0.0014193625,0.0008443953,0.00055946875,0.0015660237],"category_scores_gemma":[0.0036583669,0.0004160877,0.0015666314,0.0009577278,0.0003913726,0.0005883003,0.000754387,0.0008559773,0.00034653282],"study_design_candidate":"simulation_or_modeling","study_design_consensus":"simulation_or_modeling","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00045670333,0.00027204672,0.032680567,0.0005596148,0.0013519394,0.00039777032,0.00031585628,0.7440754,0.02676419,0.021589492,0.004950802,0.16658558],"study_design_scores_gemma":[0.00001137577,0.000018015715,0.0012386172,0.000008521626,0.00003783637,0.000036242087,0.000018210721,0.99308586,0.0010644586,0.0034527306,0.0010191922,0.000008882089],"about_ca_topic_score_codex":0.005024858,"about_ca_topic_score_gemma":0.0076121776,"teacher_disagreement_score":0.005024858,"about_ca_system_score_codex":0.0007486812,"about_ca_system_score_gemma":0.0019359364,"threshold_uncertainty_score":0.009991229},"labels":[],"label_agreement":null},{"id":"W4382631951","doi":"10.1186/s13148-023-01524-7","title":"Maternal glycemia in pregnancy is longitudinally associated with blood DNAm variation at the FSD1L gene from birth to 5 years of age","year":2023,"lang":"en","type":"article","venue":"Clinical Epigenetics","topic":"Gestational Diabetes Research and Management","field":"Medicine","cited_by":17,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Centre Intégré Universitaire de Santé et de Services Sociaux du Saguenay–Lac-Saint-Jean; Centre Hospitalier Universitaire de Sherbrooke; Université de Sherbrooke","funders":"Canadian Institutes of Health Research; Fonds de Recherche du Québec - Santé; Diabète Québec","keywords":"dNaM; Medicine; Pregnancy; Offspring; Gestational age; Body mass index; In utero; Fetus; Birth weight; Obstetrics; Physiology; Endocrinology; DNA methylation; Biology; Genetics","score_opus":0.052551431691852814,"score_gpt":0.3512284767339907,"score_spread":0.2986770450421379,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4382631951","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99717975,0.00052022043,0.00066598476,0.00009921463,0.0000142245235,0.000003368069,0.0011411915,0.000018560737,0.00035741596],"genre_scores_gemma":[0.9981,0.00016000672,0.0005302246,0.00002621091,0.0000064288056,0.000015349447,0.00063268916,0.000008662693,0.00052037346],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99942636,0.00015490949,0.000046623332,0.00022925097,0.000060200407,0.00008279547],"domain_scores_gemma":[0.9984479,0.0003608528,0.000667067,0.00020929729,0.00014352439,0.00017137008],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008843161,0.00023970926,0.00023555027,0.00042123668,0.00038518975,0.0005280761,0.00045031362,0.00041152333,0.002046878],"category_scores_gemma":[0.0027021193,0.00025214057,0.0005401645,0.000661006,0.00018123708,0.00023385939,0.00047846689,0.00059793284,0.00019491476],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00048735668,0.000020999416,0.9924907,0.000015067565,0.00022134045,0.00012005666,0.0001193308,0.00014294534,0.0020377592,0.00009389329,0.00025832985,0.0039921897],"study_design_scores_gemma":[0.0000042891807,0.000061014744,0.9986785,0.000010152506,0.00006770806,0.00012149643,0.000043146687,0.000355912,0.0003181988,0.00005415772,0.00028149266,0.0000039903803],"about_ca_topic_score_codex":0.010775195,"about_ca_topic_score_gemma":0.00887037,"teacher_disagreement_score":0.010775195,"about_ca_system_score_codex":0.0003361962,"about_ca_system_score_gemma":0.00035811777,"threshold_uncertainty_score":0.021425009},"labels":[],"label_agreement":null},{"id":"W4386599917","doi":"10.1186/s13148-023-01542-5","title":"Analysis of DNA methylation at birth and in childhood reveals changes associated with season of birth and latitude","year":2023,"lang":"en","type":"review","venue":"Clinical Epigenetics","topic":"Epigenetics and DNA Methylation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":9,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Centre Intégré Universitaire de Santé et de Services Sociaux du Saguenay–Lac-Saint-Jean; Centre Hospitalier Universitaire de Sherbrooke; Université de Sherbrooke","funders":"National Institute of Environmental Health Sciences; Medical Research Council; World Health Organization","keywords":"Season of birth; dNaM; DNA methylation; Demography; Biology; Differentially methylated regions; Epigenetics; Genetics; Gene","score_opus":0.0719062360397216,"score_gpt":0.3818194612004506,"score_spread":0.30991322516072906,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4386599917","genre_codex":"empirical","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8283996,0.15610911,0.005270551,0.0009421628,0.00021841284,0.000037596044,0.0072475057,0.000083387335,0.0016916547],"genre_scores_gemma":[0.9866904,0.010378312,0.0010769094,0.00024378186,0.00004960396,0.00003178953,0.0012371655,0.000023692195,0.00026827364],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9983542,0.00068944524,0.00014653834,0.000520637,0.0001467288,0.00014247643],"domain_scores_gemma":[0.9970425,0.0015319608,0.00077298813,0.00032936284,0.00021659303,0.00010656747],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0022553457,0.0004296254,0.0010276649,0.000942647,0.0003689776,0.00088085304,0.00055459933,0.00052240456,0.0012782594],"category_scores_gemma":[0.005672511,0.00032226564,0.00410524,0.0021739514,0.0003685647,0.0003386845,0.0006587313,0.00069466454,0.00010347383],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.003095517,0.000030321517,0.8930352,0.0033444082,0.06769393,0.00018268627,0.00026612426,0.0017568176,0.0040397807,0.00041973326,0.0012732577,0.024862317],"study_design_scores_gemma":[0.00013503026,0.00029818874,0.9493956,0.00062259426,0.040371757,0.0002947797,0.00020661236,0.0014321273,0.0020903917,0.000826429,0.00430228,0.000024226314],"about_ca_topic_score_codex":0.01232545,"about_ca_topic_score_gemma":0.018500358,"teacher_disagreement_score":0.01232545,"about_ca_system_score_codex":0.000546055,"about_ca_system_score_gemma":0.00053752173,"threshold_uncertainty_score":0.024507403},"labels":[],"label_agreement":null},{"id":"W4387296095","doi":"10.1186/s13148-023-01571-0","title":"Epigenomic response to albuterol treatment in asthma-relevant airway epithelial cells","year":2023,"lang":"en","type":"article","venue":"Clinical Epigenetics","topic":"Asthma and respiratory diseases","field":"Medicine","cited_by":10,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"St. Michael's Hospital","funders":"Ministerio de Universidades; Common Fund; National Institute of Environmental Health Sciences; National Cancer Institute; National Human Genome Research Institute; National Institute of Mental Health; National Heart, Lung, and Blood Institute; Instituto de Salud Carlos III; NIH Office of the Director; University of California, San Francisco; National Institutes of Health; National Institute of Neurological Disorders and Stroke; Universidad de La Laguna; Ministerio de Ciencia e Innovación; New York Genome Center; American Asthma Foundation; National Institute on Drug Abuse; National Institute on Minority Health and Health Disparities; Tobacco-Related Disease Research Program","keywords":"dNaM; DNA methylation; Epigenomics; Epigenome; Bronchodilator; CpG site; Asthma; Epigenetics; Medicine; H3K4me3; Salbutamol; Biology; Immunology; Promoter; Gene; Genetics; Gene expression","score_opus":0.0415960035546869,"score_gpt":0.3642143311157816,"score_spread":0.3226183275610947,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4387296095","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9950871,0.0007321583,0.00094670604,0.00005281531,0.0000073987903,0.000020599584,0.0025624498,0.000028622011,0.0005622866],"genre_scores_gemma":[0.9956463,0.00026435097,0.00080641184,0.00006245026,0.000004243609,0.00004836351,0.0024257596,0.000009147612,0.0007328884],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998323,0.000032175078,0.00000946163,0.00005806828,0.00004143732,0.000026612892],"domain_scores_gemma":[0.9998394,0.00004155622,0.000039146165,0.000028428263,0.00003524847,0.000016152891],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014761266,0.000119555705,0.00024558292,0.00028696266,0.00017191315,0.00021575371,0.00013905927,0.0001722262,0.0016304255],"category_scores_gemma":[0.00026339572,0.00008297021,0.00018716067,0.00041153078,0.00012297311,0.00005678312,0.00022267055,0.00015640055,0.00018513888],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00049561047,0.000022271724,0.04018558,0.000075378695,0.00008460745,0.00007204144,0.00008371853,0.00021256827,0.95443237,0.000034859495,0.00015651828,0.0041443976],"study_design_scores_gemma":[0.000020552001,0.00027091117,0.81815165,0.0000072952694,0.00012133484,0.00033805173,0.0001867759,0.0011736798,0.1777493,0.00005283935,0.0019192955,0.000008246969],"about_ca_topic_score_codex":0.0033124338,"about_ca_topic_score_gemma":0.0043523093,"teacher_disagreement_score":0.0033124338,"about_ca_system_score_codex":0.00021993305,"about_ca_system_score_gemma":0.00017688153,"threshold_uncertainty_score":0.0065863132},"labels":[],"label_agreement":null},{"id":"W4387964847","doi":"10.1186/s13148-023-01582-x","title":"Peripheral blood DNA methylation and neuroanatomical responses to HDACi treatment that rescues neurological deficits in a Kabuki syndrome mouse model","year":2023,"lang":"en","type":"article","venue":"Clinical Epigenetics","topic":"Genomics and Rare Diseases","field":"Biochemistry, Genetics and Molecular Biology","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"SickKids Foundation; University of Toronto; Hospital for Sick Children","funders":"Canadian Institutes of Health Research; Ontario Brain Institute","keywords":"Neurology; Peripheral blood; Human genetics; Medicine; DNA methylation; Peripheral; Bioinformatics; Neuroscience; Biology; Immunology; Genetics; Internal medicine; Psychiatry; Gene","score_opus":0.06263476680953434,"score_gpt":0.3412812470300103,"score_spread":0.27864648022047594,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4387964847","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9854198,0.0022731973,0.004736546,0.00030622998,0.00012260319,0.000093263676,0.0042303707,0.0006761766,0.0021417509],"genre_scores_gemma":[0.978691,0.0016195477,0.0055446825,0.00025490933,0.00003100989,0.00028343673,0.0025402587,0.00016228338,0.010872824],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99975914,0.000017396153,0.000020772866,0.000096116906,0.0000527405,0.000053828022],"domain_scores_gemma":[0.99973434,0.0000120022505,0.000091009555,0.00002758353,0.000030709587,0.0001043164],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00016692728,0.00067172584,0.000536948,0.0009143396,0.00025163335,0.00034917367,0.00033284188,0.00050933124,0.002750119],"category_scores_gemma":[0.000109130284,0.00035590248,0.00042935455,0.00026246242,0.0005014619,0.00023408135,0.0002022212,0.0014145876,0.00058483856],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00046689808,0.00007896865,0.00028359407,0.000027832391,0.00001519823,0.000042139032,0.000018320192,0.00003644298,0.9975533,0.000027856264,0.00010992063,0.0013396017],"study_design_scores_gemma":[0.000079594596,0.0016759612,0.017548962,0.000016662863,0.00008718053,0.00032840352,0.0000910255,0.0006466815,0.97766453,0.00008277192,0.001758022,0.000020153358],"about_ca_topic_score_codex":0.002096599,"about_ca_topic_score_gemma":0.0045373435,"teacher_disagreement_score":0.002750119,"about_ca_system_score_codex":0.00039304205,"about_ca_system_score_gemma":0.00029812354,"threshold_uncertainty_score":0.009200096},"labels":[],"label_agreement":null},{"id":"W4387996188","doi":"10.1186/s13148-023-01589-4","title":"Multi-tissue epigenetic analysis identifies distinct associations underlying insulin resistance and Alzheimer’s disease at CPT1A locus","year":2023,"lang":"en","type":"article","venue":"Clinical Epigenetics","topic":"Epigenetics and DNA Methylation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":19,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Université de Sherbrooke","funders":"National Institute of Environmental Health Sciences; National Institute of Diabetes and Digestive and Kidney Diseases; National Heart, Lung, and Blood Institute; School of Medicine, Boston University; National Institute on Aging; National Institutes of Health; National Institute of Neurological Disorders and Stroke; Alzheimer's Association","keywords":"Epigenetics; DNA methylation; Insulin resistance; Framingham Heart Study; Genome-wide association study; Biology; Methylation; Type 2 diabetes; Genetics; Internal medicine; Endocrinology; Bioinformatics; Disease; Medicine; Insulin; Genotype; Single-nucleotide polymorphism; Diabetes mellitus; Framingham Risk Score; DNA; Gene; Gene expression","score_opus":0.11367559224109326,"score_gpt":0.4090302185544867,"score_spread":0.29535462631339343,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4387996188","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99238235,0.00057266623,0.00456513,0.00009488668,0.000017198701,0.00001531941,0.0017868357,0.000053826396,0.00051193894],"genre_scores_gemma":[0.99653685,0.00011937496,0.0020923375,0.000059202408,0.000010922828,0.000017889797,0.0005867034,0.000015539104,0.0005610522],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9997627,0.000034653527,0.000015529411,0.00013065539,0.000030581137,0.000025805097],"domain_scores_gemma":[0.99959606,0.00009100035,0.0001426885,0.000055288492,0.000054258737,0.000060837352],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00036309578,0.00022983957,0.00026462937,0.00066691457,0.0002909584,0.0003329993,0.00025698097,0.00027953082,0.0026882142],"category_scores_gemma":[0.0007667216,0.00017116436,0.0005109907,0.0005124081,0.0002237135,0.0001190322,0.00034194396,0.00043868282,0.00020149387],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0017076719,0.00008442442,0.59941417,0.00019999055,0.0010704116,0.00037379906,0.00042473542,0.0010594518,0.3644786,0.00038411297,0.0008868947,0.02991565],"study_design_scores_gemma":[0.000027290236,0.00014272385,0.9829684,0.000014794871,0.00032900402,0.00047109186,0.00006669095,0.0018661529,0.0129218595,0.000355483,0.00082150864,0.000014959621],"about_ca_topic_score_codex":0.004344941,"about_ca_topic_score_gemma":0.0072866073,"teacher_disagreement_score":0.004344941,"about_ca_system_score_codex":0.00023526992,"about_ca_system_score_gemma":0.00019131434,"threshold_uncertainty_score":0.00899291},"labels":[],"label_agreement":null},{"id":"W4387996465","doi":"10.1186/s13148-023-01564-z","title":"Profound DNA methylomic differences between single- and multi-fraction alpha irradiations of lung fibroblasts","year":2023,"lang":"en","type":"article","venue":"Clinical Epigenetics","topic":"Effects of Radiation Exposure","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ottawa Hospital; McGill University Health Centre; University of Calgary; University of Ottawa; Canadian Nuclear Laboratories","funders":"Génome Québec","keywords":"dNaM; DNA methylation; Epigenetics; Carcinogenesis; DNA damage; Biology; Cancer research; Molecular biology; Chemistry; Genetics; Gene; DNA; Gene expression","score_opus":0.11971918349412569,"score_gpt":0.41258575792374086,"score_spread":0.29286657442961517,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4387996465","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99580514,0.0012131311,0.0017132113,0.000020620386,0.000010278547,0.000015927759,0.0006774034,0.000021576208,0.00052270055],"genre_scores_gemma":[0.9956676,0.00049186347,0.0013428531,0.00003689022,0.0000043185396,0.000051166415,0.0010690782,0.000011650554,0.0013246086],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998814,0.000012259828,0.000011579654,0.000048818787,0.000028854634,0.000017136532],"domain_scores_gemma":[0.99988925,0.000026466743,0.000022725682,0.00001962779,0.000025647458,0.000016286509],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012226422,0.00019828854,0.00021811808,0.0002452137,0.00017291385,0.00017090065,0.00012707223,0.00024932998,0.001215561],"category_scores_gemma":[0.00016738311,0.00009419034,0.0002498254,0.0001649273,0.00011777524,0.000097715114,0.00019178702,0.00020675124,0.00016637001],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000938293,0.000005682268,0.0013982747,0.000015149795,0.000007922455,0.000017655057,0.000022753928,0.00002026938,0.99745053,0.000007736475,0.000009371326,0.00095068564],"study_design_scores_gemma":[0.000009805524,0.00055082113,0.13514392,0.000009161754,0.0000751477,0.0005570688,0.0001524465,0.00042350875,0.8615111,0.000048903126,0.0015074858,0.000010650477],"about_ca_topic_score_codex":0.00079802884,"about_ca_topic_score_gemma":0.001064815,"teacher_disagreement_score":0.001215561,"about_ca_system_score_codex":0.0001377095,"about_ca_system_score_gemma":0.00011016024,"threshold_uncertainty_score":0.0040664077},"labels":[],"label_agreement":null},{"id":"W4389683079","doi":"10.1186/s13148-023-01612-8","title":"Methylation analysis by targeted bisulfite sequencing in large for gestational age (LGA) newborns: the LARGAN cohort","year":2023,"lang":"en","type":"article","venue":"Clinical Epigenetics","topic":"Birth, Development, and Health","field":"Medicine","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University","funders":"Eunice Kennedy Shriver National Institute of Child Health and Human Development; National Institute on Alcohol Abuse and Alcoholism; National Institutes of Health","keywords":"DNA methylation; Differentially methylated regions; Biology; Offspring; Methylation; Cohort; Epigenetics; Physiology; Bioinformatics; Medicine; Internal medicine; Endocrinology; Genetics; Pregnancy; Gene; Gene expression","score_opus":0.08771854787517044,"score_gpt":0.41294051816325705,"score_spread":0.32522197028808664,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4389683079","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99335176,0.0003368069,0.0011080317,0.00006700214,0.000009198278,0.000023941644,0.0044579534,0.000029163986,0.0006160973],"genre_scores_gemma":[0.9928758,0.00025465727,0.0016370533,0.000070331735,0.000009617221,0.00009114554,0.0043689446,0.00003551772,0.0006569803],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99959415,0.000092700524,0.000030217741,0.00016960327,0.00007027263,0.00004293521],"domain_scores_gemma":[0.9995347,0.00007506199,0.00011761378,0.00013754143,0.00006715551,0.000067931825],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009777732,0.00032214183,0.0003557493,0.00063244364,0.00052529783,0.00043365985,0.00040564532,0.0003362949,0.0013727831],"category_scores_gemma":[0.0016027717,0.0001888239,0.00047349875,0.00054335233,0.00016827029,0.00015168406,0.000546583,0.0003327717,0.000218589],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0007401154,0.000032958716,0.9794774,0.000054098473,0.00026974428,0.00053000276,0.00027602472,0.0003203708,0.00859634,0.00029610193,0.0013544761,0.0080524115],"study_design_scores_gemma":[0.000021275944,0.000099420235,0.99414563,0.000027902763,0.00018150556,0.00075659127,0.00014163465,0.0006428572,0.000994715,0.00017104924,0.0028036602,0.0000138343585],"about_ca_topic_score_codex":0.00985094,"about_ca_topic_score_gemma":0.012155406,"teacher_disagreement_score":0.00985094,"about_ca_system_score_codex":0.00039032154,"about_ca_system_score_gemma":0.00035613158,"threshold_uncertainty_score":0.019587219},"labels":[],"label_agreement":null},{"id":"W4391820890","doi":"10.1186/s13148-024-01631-z","title":"Increased CpG methylation at the CDH1 locus in inflamed ileal mucosa of patients with Crohn disease","year":2024,"lang":"en","type":"article","venue":"Clinical Epigenetics","topic":"Inflammatory Bowel Disease","field":"Biochemistry, Genetics and Molecular Biology","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"National Research Council Canada","funders":"Institut National de la Santé et de la Recherche Médicale","keywords":"CDH1; Methylation; CpG site; DNA methylation; Epigenetics; Peripheral blood mononuclear cell; Inflammatory bowel disease; Medicine; Pathogenesis; Immunology; Intestinal mucosa; Gastric mucosa; Enhancer; Cancer research; Gastroenterology; Internal medicine; Biology; Disease; Gene; Gene expression; Stomach; Cell; In vitro; Genetics; Cadherin","score_opus":0.012125699180010118,"score_gpt":0.2924547671121939,"score_spread":0.2803290679321838,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4391820890","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99954873,0.00022028951,0.000050426814,0.00001194098,0.000002034786,0.0000016623694,0.000046892415,0.0000026424557,0.000115365736],"genre_scores_gemma":[0.9997646,0.000058176425,0.000064202155,0.000008566731,0.00000400816,0.0000016154587,0.00004851657,8.2143606e-7,0.000049427777],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99989235,0.000023197881,0.000013369581,0.00003334196,0.00001965413,0.000018025963],"domain_scores_gemma":[0.99965405,0.0000882475,0.00014341109,0.000016819891,0.00003208937,0.00006551778],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012338128,0.00016186111,0.00024453315,0.00054279226,0.00022205274,0.00023888904,0.0000844185,0.00026237237,0.0013906183],"category_scores_gemma":[0.0007122977,0.00010710642,0.00008561419,0.0002888393,0.0001871273,0.00012614757,0.00013862859,0.00020730928,0.00012967423],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006052492,0.00002535094,0.98045474,0.00003551794,0.000030331497,0.0003900241,0.00015142885,0.000036259353,0.014402874,0.000008766316,0.00006202691,0.0037972396],"study_design_scores_gemma":[0.000009901866,0.00017483666,0.99643564,0.0000060317066,0.00002525686,0.0017446066,0.000098374716,0.000092821414,0.001258074,0.00001588487,0.00013644125,0.000002174724],"about_ca_topic_score_codex":0.0004919249,"about_ca_topic_score_gemma":0.0005582,"teacher_disagreement_score":0.0013906183,"about_ca_system_score_codex":0.00009893098,"about_ca_system_score_gemma":0.0000568373,"threshold_uncertainty_score":0.0046520233},"labels":[],"label_agreement":null},{"id":"W4392928073","doi":"10.1186/s13148-024-01654-6","title":"Correction: Increased CpG methylation at the CDH1 locus in inflamed ileal mucosa of patients with Crohn disease","year":2024,"lang":"en","type":"erratum","venue":"Clinical Epigenetics","topic":"Inflammatory Bowel Disease","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"National Research Council Canada","funders":"","keywords":"CDH1; CpG site; DNA methylation; Crohn's disease; Methylation; Disease; Medicine; Locus (genetics); Inflammatory bowel disease; Gastroenterology; Internal medicine; Biology; Bioinformatics; Genetics; Gene; Cadherin; Gene expression","score_opus":0.01110007196099265,"score_gpt":0.28536065495332885,"score_spread":0.2742605829923362,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4392928073","genre_codex":"editorial","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00039160158,0.0010699917,0.0007515972,0.054744724,0.9387189,0.000025716108,0.0016119587,0.0004309911,0.0022546037],"genre_scores_gemma":[0.048235465,0.010004724,0.010389322,0.12018116,0.51731986,0.00044945968,0.00521412,0.0029581161,0.28524774],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99783295,0.0003930774,0.00034557047,0.0003561639,0.0007904486,0.00028187942],"domain_scores_gemma":[0.98803395,0.0036502609,0.0008429533,0.00088546466,0.0056143026,0.0009729425],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.002625672,0.0018275628,0.0016537344,0.0023833844,0.0017746201,0.002447714,0.0027317866,0.006493156,0.07291376],"category_scores_gemma":[0.035601493,0.00093350007,0.0012915793,0.0014721013,0.0017768084,0.0014165619,0.001317567,0.007363748,0.02571494],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000965312,0.000007782534,0.0002542482,0.00029646212,0.000030068577,0.0008237215,0.00003263994,0.000063460546,0.00016301942,0.000440468,0.9905099,0.007281751],"study_design_scores_gemma":[0.00028278222,0.00005663373,0.0038757715,0.0007649164,0.00016458053,0.0050531016,0.00016936773,0.00065199856,0.0017227787,0.0024932974,0.9846881,0.00007656845],"about_ca_topic_score_codex":0.008479179,"about_ca_topic_score_gemma":0.009798517,"teacher_disagreement_score":0.07291376,"about_ca_system_score_codex":0.0020313195,"about_ca_system_score_gemma":0.0032000123,"threshold_uncertainty_score":0.24392086},"labels":[],"label_agreement":null},{"id":"W4393266876","doi":"10.1186/s13148-024-01662-6","title":"Refining risk prediction in pediatric acute lymphoblastic leukemia through DNA methylation profiling","year":2024,"lang":"en","type":"article","venue":"Clinical Epigenetics","topic":"Acute Lymphoblastic Leukemia research","field":"Medicine","cited_by":9,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Université de Montréal; Centre Hospitalier Universitaire Sainte-Justine","funders":"Science for Life Laboratory; Cancerfonden; Barncancerfonden; Knut och Alice Wallenbergs Stiftelse; Uppsala Universitet; Vetenskapsrådet; Swedish Cancer Foundation","keywords":"Human genetics; DNA methylation; Lymphoblastic Leukemia; Medicine; Profiling (computer programming); Computational biology; Leukemia; Bioinformatics; Oncology; Internal medicine; Biology; Genetics; Gene; Computer science; Gene expression","score_opus":0.0483251129289238,"score_gpt":0.3777550501158702,"score_spread":0.32942993718694635,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4393266876","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9944067,0.00044478738,0.004206751,0.000047514302,0.000003957164,0.000017680386,0.00056992675,0.000046023117,0.00025675457],"genre_scores_gemma":[0.9931526,0.00022299265,0.0056394795,0.000016457187,0.000005673918,0.000011035142,0.0008006897,0.000006997392,0.0001439385],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9995695,0.00016372927,0.000026100151,0.00009474586,0.00009176378,0.00005421157],"domain_scores_gemma":[0.9993362,0.00026370963,0.00018119502,0.00005898034,0.000125468,0.00003447952],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001137053,0.0004388861,0.0004497937,0.0008637243,0.00022241169,0.00039360859,0.00025916097,0.00019412299,0.00023450982],"category_scores_gemma":[0.0029106943,0.00013627106,0.0003391999,0.0008328727,0.00014777193,0.00013001768,0.0003626689,0.00042125952,0.000108333064],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00024465303,0.000033949655,0.9491057,0.000028985556,0.00011458151,0.0001228939,0.00015743845,0.01292654,0.006852609,0.00009692363,0.00029083702,0.030024797],"study_design_scores_gemma":[0.000029400475,0.0001962249,0.89556205,0.00003050115,0.00018075808,0.00041496483,0.00026250308,0.09290804,0.008052908,0.0006219711,0.0017105086,0.000030144338],"about_ca_topic_score_codex":0.03925948,"about_ca_topic_score_gemma":0.06739094,"teacher_disagreement_score":0.03925948,"about_ca_system_score_codex":0.00047029418,"about_ca_system_score_gemma":0.0011764326,"threshold_uncertainty_score":0.07806194},"labels":[],"label_agreement":null},{"id":"W4396871794","doi":"10.1186/s13148-024-01675-1","title":"DNA methylation signatures of youth-onset type 2 diabetes and exposure to maternal diabetes","year":2024,"lang":"en","type":"article","venue":"Clinical Epigenetics","topic":"Gestational Diabetes Research and Management","field":"Medicine","cited_by":13,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Manitoba Health; University of British Columbia; Pacific Centre for Reproductive Medicine; University of Manitoba; Children's Hospital Research Institute of Manitoba","funders":"","keywords":"Type 2 diabetes; Epigenome; DNA methylation; Diabetes mellitus; In utero; dNaM; Medicine; Internal medicine; Endocrinology; Obesity; Cohort; Physiology; Oncology; Pregnancy; Biology; Genetics; Gene; Fetus; Gene expression","score_opus":0.04470708260618523,"score_gpt":0.37045240635908405,"score_spread":0.32574532375289883,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4396871794","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9972652,0.00080515555,0.00035045663,0.000033691944,0.0000041050002,0.0000026824557,0.0012378449,0.000010669415,0.00029017762],"genre_scores_gemma":[0.9985228,0.0003042049,0.0002521558,0.000019450918,0.000004794746,0.0000066264934,0.0006620739,0.000004458518,0.00022350973],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9998191,0.00003401518,0.000012163582,0.00007614379,0.000025677571,0.000032987507],"domain_scores_gemma":[0.99957865,0.00009570728,0.00019391457,0.000027330343,0.000050753413,0.000053726868],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00023217712,0.00015873836,0.0002402852,0.00046232168,0.00013369153,0.00026201815,0.00015830951,0.00018293227,0.001524149],"category_scores_gemma":[0.0009180265,0.000117668715,0.0002283553,0.00064398383,0.0001299572,0.00008023661,0.00028256563,0.0001957206,0.00012218053],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00052212155,0.000015023705,0.97740865,0.000049785544,0.00020383125,0.0001082229,0.000219719,0.0001539841,0.01478924,0.000077140394,0.00018989923,0.0062622665],"study_design_scores_gemma":[0.0000050018193,0.000041488234,0.99818367,0.0000097849,0.00006193561,0.0001944981,0.00007721518,0.00018914124,0.00085937674,0.000049967774,0.00032540198,0.0000024308551],"about_ca_topic_score_codex":0.0052072653,"about_ca_topic_score_gemma":0.0064576804,"teacher_disagreement_score":0.0052072653,"about_ca_system_score_codex":0.00016075032,"about_ca_system_score_gemma":0.00015771468,"threshold_uncertainty_score":0.010353923},"labels":[],"label_agreement":null},{"id":"W4396976798","doi":"10.1186/s13148-024-01670-6","title":"DNA methylation and type 2 diabetes: a systematic review","year":2024,"lang":"en","type":"review","venue":"Clinical Epigenetics","topic":"Epigenetics and DNA Methylation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":59,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"The Wellcome Trust DBT India Alliance; Department of Biotechnology, Ministry of Science and Technology, India; Wellcome Trust","keywords":"DNA methylation; TXNIP; Type 2 diabetes; Biology; Bioinformatics; Methylation; Diabetes mellitus; Medicine; Internal medicine; Endocrinology; Genetics; Gene; Gene expression","score_opus":0.0843513859580974,"score_gpt":0.43442930042878614,"score_spread":0.35007791447068876,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4396976798","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0008465601,0.9981945,0.000087352404,0.00025263362,0.000069740774,0.00009808929,0.0003313227,0.0000045585944,0.000115347735],"genre_scores_gemma":[0.015439129,0.98292565,0.00040139037,0.000472045,0.00009087193,0.00034437506,0.00024704312,0.0000029792463,0.00007650244],"study_design_codex":"systematic_review","study_design_gemma":"systematic_review","domain_scores_codex":[0.99601525,0.0014703234,0.0012241408,0.00043382632,0.00069621875,0.00016019108],"domain_scores_gemma":[0.9850906,0.010681213,0.0027747648,0.00019787908,0.0010827107,0.00017275228],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0046106335,0.0013405369,0.007196407,0.006148109,0.0005328673,0.0015897267,0.0014490437,0.0017516996,0.004674992],"category_scores_gemma":[0.021479875,0.00076124637,0.0065208804,0.009229261,0.0006197858,0.0012810268,0.0010645827,0.0010099097,0.00024356098],"study_design_candidate":"systematic_review","study_design_consensus":"systematic_review","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00020120724,0.0000130797935,0.0016901863,0.95373636,0.014250201,0.00010616282,0.00012622666,0.000111522415,0.00014760348,0.00015221183,0.0017097029,0.02775554],"study_design_scores_gemma":[0.00033594982,0.00023545197,0.012092522,0.83505285,0.13337187,0.0006469658,0.00023642738,0.00015952624,0.00019958666,0.00040707484,0.017211592,0.00005011781],"about_ca_topic_score_codex":0.00829105,"about_ca_topic_score_gemma":0.016260892,"teacher_disagreement_score":0.00829105,"about_ca_system_score_codex":0.0025239654,"about_ca_system_score_gemma":0.007472371,"threshold_uncertainty_score":0.024383605},"labels":[],"label_agreement":null},{"id":"W4399384323","doi":"10.1186/s13148-024-01684-0","title":"Consistent cord blood DNA methylation signatures of gestational age between South Asian and white European cohorts","year":2024,"lang":"en","type":"article","venue":"Clinical Epigenetics","topic":"Epigenetics and DNA Methylation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"BC Children's Hospital; SickKids Foundation; University of Toronto; Children's Hospital Research Institute of Manitoba; Impact; Population Health Research Institute; Thrombosis and Atherosclerosis Research Institute; University of Alberta; McMaster University; University of British Columbia; Hospital for Sick Children; University of Manitoba; St. Joseph’s Healthcare Hamilton","funders":"Canadian Institutes of Health Research; McMaster University; Hamilton Health Sciences; Partenariat Canadien Contre Le Cancer; Children's Health Research Institute; Heart and Stroke Foundation of Canada","keywords":"Human genetics; Cord blood; DNA methylation; White (mutation); Reproductive medicine; Medicine; Gestational age; Biology; Pregnancy; Genetics; Demography; Obstetrics; Physiology; Bioinformatics; Gene","score_opus":0.0404186159323241,"score_gpt":0.3357688343889084,"score_spread":0.2953502184565843,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4399384323","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99755955,0.00035433716,0.0005105135,0.000049157978,0.000011151936,0.00000818208,0.0008187209,0.000007913105,0.00068045774],"genre_scores_gemma":[0.99869174,0.00014191223,0.00028129484,0.000040502844,0.000004940697,0.000011292437,0.0005438384,0.0000074090676,0.00027720514],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.999318,0.00010042284,0.00006737018,0.000332109,0.00008894985,0.00009311282],"domain_scores_gemma":[0.9990042,0.00016302966,0.00029433233,0.00020423146,0.00019543793,0.00013882104],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010142777,0.00027399688,0.00028728406,0.00055973517,0.00054360717,0.00070627267,0.000392044,0.00025253225,0.0019203888],"category_scores_gemma":[0.0022886742,0.00019104018,0.0004489757,0.0009229309,0.0004196607,0.00019826963,0.00077848614,0.00025813634,0.00016866178],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0004277105,0.000011043655,0.9851332,0.00005093684,0.0004266816,0.00014905154,0.0008773899,0.00007787233,0.008145408,0.00027649876,0.00023514937,0.0041891993],"study_design_scores_gemma":[0.000008991922,0.00003834631,0.9976497,0.000016566488,0.00013591758,0.0002000019,0.00036812897,0.00013063477,0.0007386794,0.000106324085,0.00060029305,0.000006430062],"about_ca_topic_score_codex":0.033124723,"about_ca_topic_score_gemma":0.047699064,"teacher_disagreement_score":0.033124723,"about_ca_system_score_codex":0.00033569432,"about_ca_system_score_gemma":0.00061863556,"threshold_uncertainty_score":0.06586379},"labels":[],"label_agreement":null},{"id":"W4401565880","doi":"10.1186/s13148-024-01721-y","title":"Combining human tissue and iPSC-derived cardiomyocyte eQTL datasets to understand noncoding genetic variants: boosting the cardiogenetics toolbox","year":2024,"lang":"en","type":"letter","venue":"Clinical Epigenetics","topic":"Bioinformatics and Genomic Networks","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Simon Fraser University; University of Ottawa; BC Children's Hospital; University of British Columbia","funders":"Canadian Institutes of Health Research; Government of Ontario; Heart and Stroke Foundation of Canada","keywords":"Human genetics; Boosting (machine learning); Toolbox; Computational biology; Expression quantitative trait loci; Biology; Bioinformatics; Genetics; Machine learning; Gene; Single-nucleotide polymorphism; Computer science; Genotype","score_opus":0.04804032035577991,"score_gpt":0.333212728599577,"score_spread":0.2851724082437971,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4401565880","genre_codex":"commentary","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0015387182,0.005147498,0.004631935,0.9714794,0.014322782,0.00002661617,0.00070497283,0.00016527467,0.0019828621],"genre_scores_gemma":[0.019084286,0.007992494,0.008671816,0.8780195,0.07872816,0.00018583026,0.00045584937,0.00019570971,0.0066663157],"study_design_codex":"not_applicable","study_design_gemma":"simulation_or_modeling","domain_scores_codex":[0.99622077,0.0014747597,0.00034587627,0.00070790754,0.001015833,0.00023485103],"domain_scores_gemma":[0.9426168,0.04772871,0.00083652494,0.0016575748,0.0049835965,0.0021769335],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.010861372,0.0005495064,0.001058975,0.00074164156,0.0011557577,0.0032356603,0.0016029975,0.014742286,0.0043381494],"category_scores_gemma":[0.0439512,0.0005143726,0.00093600363,0.00063675136,0.0023613663,0.0035453695,0.0023437622,0.024645986,0.0040790597],"study_design_candidate":"simulation_or_modeling","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00041591495,0.00007938352,0.004218312,0.00019637402,0.00016265763,0.0020209795,0.00026535295,0.00058480934,0.0029710599,0.011018264,0.8427197,0.13534717],"study_design_scores_gemma":[0.0005261334,0.00016780685,0.007238472,0.0005012769,0.00019321118,0.003296466,0.0005344185,0.005937616,0.0033131987,0.14812751,0.8300058,0.00015805014],"about_ca_topic_score_codex":0.0025144084,"about_ca_topic_score_gemma":0.00524407,"teacher_disagreement_score":0.014742286,"about_ca_system_score_codex":0.0016164728,"about_ca_system_score_gemma":0.0017445078,"threshold_uncertainty_score":0.057441056},"labels":[],"label_agreement":null},{"id":"W4404522113","doi":"10.1186/s13148-024-01779-8","title":"Associations of epigenetic age acceleration at birth and age 12 years with adolescent cardiometabolic risk: the HOME study","year":2024,"lang":"en","type":"article","venue":"Clinical Epigenetics","topic":"Epigenetics and DNA Methylation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Simon Fraser University","funders":"National Institute of Environmental Health Sciences; National Institutes of Health","keywords":"Medicine; Epigenetics; Offspring; Confounding; Prospective cohort study; Cohort; Gestational age; Cohort study; Internal medicine; Pregnancy; Physiology; Biology; Genetics","score_opus":0.05119626797552229,"score_gpt":0.34599151352285584,"score_spread":0.29479524554733355,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4404522113","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.999236,0.00013612863,0.00012052349,0.000035337256,0.0000048742145,0.000008923579,0.0002658519,0.0000026029845,0.00018972185],"genre_scores_gemma":[0.9992483,0.00008717783,0.00018568977,0.000024171015,0.000007619141,0.00001758893,0.00024820186,0.000002381788,0.00017894778],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99963295,0.00015761264,0.000026119116,0.0000822947,0.000051941737,0.00004901479],"domain_scores_gemma":[0.9985649,0.00024350791,0.0005804945,0.00020166849,0.00014904687,0.00026041182],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008982324,0.00022956646,0.00029121817,0.00033025473,0.0003207025,0.0005213462,0.00040154284,0.0003484064,0.0008967184],"category_scores_gemma":[0.002096577,0.00021007369,0.00040311666,0.00046046567,0.00019205346,0.00025985547,0.00056023453,0.0006757437,0.00009924202],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010593893,0.000034540528,0.99867463,0.000005232789,0.00006954161,0.000024699038,0.00010851369,0.000014326013,0.000117407384,0.000024646755,0.000058411988,0.00076212775],"study_design_scores_gemma":[0.000004233344,0.000055299395,0.9995283,0.0000045761967,0.000041938176,0.000047121157,0.00008936015,0.000056869278,0.00004462925,0.000011813636,0.00011445359,0.0000014022492],"about_ca_topic_score_codex":0.008929705,"about_ca_topic_score_gemma":0.012807347,"teacher_disagreement_score":0.008929705,"about_ca_system_score_codex":0.00020848695,"about_ca_system_score_gemma":0.00029161072,"threshold_uncertainty_score":0.017755449},"labels":[],"label_agreement":null},{"id":"W4404613437","doi":"10.1186/s13148-024-01761-4","title":"Technical variability across the 450K, EPICv1, and EPICv2 DNA methylation arrays: lessons learned for clinical and longitudinal studies","year":2024,"lang":"en","type":"article","venue":"Clinical Epigenetics","topic":"Epigenetics and DNA Methylation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":19,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"BC Children's Hospital; University of British Columbia","funders":"Canadian Institutes of Health Research; National Institutes of Health; Wellcome Trust; National Institute of Mental Health; Medical Research Council; Bill and Melinda Gates Foundation","keywords":"dNaM; Epigenetics; DNA methylation; Biology; Replicate; Genetics; Computational biology; Contempt; Intraclass correlation; Evolutionary biology; Bioinformatics; Statistics; Mathematics; Neuroscience; Gene; Psychometrics","score_opus":0.23332015016159158,"score_gpt":0.5141218530026175,"score_spread":0.2808017028410259,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4404613437","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":"methods","model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":"methods","domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.08561207,0.06392716,0.7719993,0.054408263,0.0065675117,0.0008839495,0.0053614737,0.0022882656,0.008951957],"genre_scores_gemma":[0.38449708,0.018835777,0.5558013,0.019653836,0.005832028,0.0031425403,0.0048423596,0.0034386034,0.003956478],"study_design_codex":"design_other","study_design_gemma":"observational","domain_scores_codex":[0.8452434,0.09532549,0.013922003,0.020513391,0.023563951,0.001431719],"domain_scores_gemma":[0.56932145,0.25684115,0.020729385,0.081254795,0.06894379,0.0029094731],"candidate_categories":["metaresearch"],"consensus_categories":["metaresearch"],"category_scores_codex":[0.2712852,0.0017209256,0.0030448893,0.003610101,0.002162005,0.007741748,0.007832387,0.004105981,0.0027861388],"category_scores_gemma":[0.43921107,0.0019418233,0.0030947411,0.004420831,0.0059041968,0.006055633,0.0048230183,0.008274982,0.0013384076],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0013271618,0.00031331877,0.3616439,0.0037586044,0.006623091,0.0010413605,0.014793139,0.009234251,0.0065793856,0.04089934,0.05603636,0.49775007],"study_design_scores_gemma":[0.00052372634,0.0019008116,0.35386956,0.010053616,0.003662785,0.003829255,0.006235045,0.034069497,0.015936388,0.26795533,0.30060118,0.0013627664],"about_ca_topic_score_codex":0.014133591,"about_ca_topic_score_gemma":0.0147638,"teacher_disagreement_score":0.7287148,"about_ca_system_score_codex":0.0032613687,"about_ca_system_score_gemma":0.0047518993,"threshold_uncertainty_score":0.8986351},"labels":[],"label_agreement":null},{"id":"W4404673517","doi":"10.1186/s13148-024-01780-1","title":"Methylation assay in KMT2B-related dystonia: a novel diagnostic validation tool","year":2024,"lang":"en","type":"article","venue":"Clinical Epigenetics","topic":"Neurological disorders and treatments","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"London Health Sciences Centre","funders":"Conselho Nacional das Fundações Estaduais de Amparo à Pesquisa; Conselho Nacional de Desenvolvimento Científico e Tecnológico","keywords":"Human genetics; Dystonia; Methylation; DNA methylation; Medicine; Computational biology; Bioinformatics; Neurology; Biology; Genetics; Psychiatry; DNA; Gene","score_opus":0.06496116938603633,"score_gpt":0.38948163072642455,"score_spread":0.32452046134038826,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4404673517","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9086461,0.0019978662,0.08365444,0.00029638447,0.000046445708,0.00016727895,0.0012660719,0.0006995842,0.0032258797],"genre_scores_gemma":[0.9465955,0.0004186087,0.050358042,0.0001698184,0.000022141661,0.00015848828,0.0008879013,0.000054203716,0.0013353297],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9991911,0.00020961894,0.00004684927,0.00027871347,0.00021501724,0.000058801616],"domain_scores_gemma":[0.9992582,0.00029045713,0.00016913866,0.00008085943,0.00014177217,0.000059602105],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00097011094,0.00056058384,0.00025119015,0.0009904183,0.00023616418,0.0003419016,0.00042206544,0.0007418154,0.0016080376],"category_scores_gemma":[0.0022083342,0.00023725652,0.00024489177,0.0003385543,0.00037066158,0.00015802267,0.0005577432,0.0005560348,0.00058540434],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00050817564,0.00007789298,0.085165896,0.00016398515,0.000101894526,0.0006473596,0.00021507188,0.00062806415,0.8742491,0.00029680555,0.00031692607,0.03762878],"study_design_scores_gemma":[0.00008180694,0.0010476173,0.24830113,0.00008399129,0.00031193116,0.009952919,0.00017290458,0.017136788,0.71618086,0.0008473723,0.005824055,0.000058610767],"about_ca_topic_score_codex":0.0007025925,"about_ca_topic_score_gemma":0.0011969802,"teacher_disagreement_score":0.0016080376,"about_ca_system_score_codex":0.00025550654,"about_ca_system_score_gemma":0.000212404,"threshold_uncertainty_score":0.0053794384},"labels":[],"label_agreement":null},{"id":"W4405630466","doi":"10.1186/s13148-024-01784-x","title":"Maximizing insights from longitudinal epigenetic age data: simulations, applications, and practical guidance","year":2024,"lang":"en","type":"article","venue":"Clinical Epigenetics","topic":"Epigenetics and DNA Methylation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institute of Mental Health; Canadian Institutes of Health Research; Engineering and Physical Sciences Research Council; Science Foundation Ireland; National Institute on Aging; UK Research and Innovation","keywords":"dNaM; Epigenetics; DNA methylation; Longitudinal data; Demography; Longitudinal study; Robustness (evolution); Mixed model; Confounding; Medicine; Biology; Bioinformatics; Statistics; Genetics; Internal medicine; Mathematics","score_opus":0.11808230166765525,"score_gpt":0.42754855590600743,"score_spread":0.30946625423835217,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4405630466","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0846611,0.004666472,0.887769,0.011716291,0.00026065292,0.00061925116,0.0017845595,0.0010322118,0.0074905534],"genre_scores_gemma":[0.4489415,0.002904113,0.54092616,0.0017931487,0.000252868,0.0015002262,0.0013220033,0.0002829515,0.002077039],"study_design_codex":"simulation_or_modeling","study_design_gemma":"simulation_or_modeling","domain_scores_codex":[0.9916142,0.007167134,0.00024394922,0.0005202484,0.0003065209,0.00014796072],"domain_scores_gemma":[0.752984,0.23707329,0.0026678988,0.0027194289,0.003461518,0.0010939223],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.02684911,0.0018281762,0.0020288427,0.0017961276,0.0009931291,0.0022916007,0.0028569428,0.003521477,0.005394048],"category_scores_gemma":[0.17871816,0.001238828,0.0016505882,0.0018161201,0.0017932259,0.0033467377,0.0036143092,0.0031987212,0.00050695136],"study_design_candidate":"simulation_or_modeling","study_design_consensus":"simulation_or_modeling","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00020389509,0.00008823469,0.013930639,0.0004278851,0.00015794834,0.00022766627,0.00035715254,0.91397023,0.00018953782,0.036660876,0.0032449965,0.030540932],"study_design_scores_gemma":[0.00008472498,0.000057593017,0.000911652,0.00022200604,0.000045322733,0.000072063056,0.00012270012,0.9248776,0.0001968189,0.070941254,0.0024307487,0.00003755438],"about_ca_topic_score_codex":0.0330459,"about_ca_topic_score_gemma":0.024612188,"teacher_disagreement_score":0.0330459,"about_ca_system_score_codex":0.0023463068,"about_ca_system_score_gemma":0.0047299447,"threshold_uncertainty_score":0.14199334},"labels":[],"label_agreement":null},{"id":"W4406298151","doi":"10.1186/s13148-024-01807-7","title":"Validation of a hypomorphic variant in CDK13 as the cause of CHDFIDD with autosomal recessive inheritance through determination of an episignature","year":2025,"lang":"en","type":"article","venue":"Clinical Epigenetics","topic":"Genomics and Rare Diseases","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"London Health Sciences Centre; Western University","funders":"","keywords":"Missense mutation; Genetics; Human genetics; Biology; Disease; Inheritance (genetic algorithm); Intellectual disability; Bioinformatics; Mutation; Medicine; Gene; Pathology","score_opus":0.02160829386126044,"score_gpt":0.33480982444833507,"score_spread":0.3132015305870746,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4406298151","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99275655,0.0003056173,0.0047141695,0.00012032853,0.000025036357,0.000033276458,0.0004335251,0.000059147707,0.0015523215],"genre_scores_gemma":[0.9977847,0.00011861986,0.0015834166,0.000028801875,0.000008152526,0.000005926826,0.00012444587,0.00002099147,0.00032493396],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9997464,0.000035733872,0.000023722965,0.00007568512,0.00007333856,0.00004512815],"domain_scores_gemma":[0.9995453,0.0001949892,0.00006701278,0.000035635323,0.000055554436,0.00010163687],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00023207975,0.00038416462,0.00024300431,0.00086908793,0.00026183983,0.00025362967,0.0002693628,0.0005600866,0.0026802386],"category_scores_gemma":[0.0010795349,0.00009892889,0.00020479472,0.0003364336,0.0004945957,0.00012728907,0.0003630679,0.0003832209,0.00031738167],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005617605,0.00008232909,0.07465142,0.00011770615,0.00006053414,0.15627238,0.0007912232,0.0004847805,0.7507526,0.001305522,0.00027125096,0.014648488],"study_design_scores_gemma":[0.000052901014,0.0006450695,0.23225579,0.00005878157,0.00014734524,0.29668248,0.00068616756,0.0042583137,0.45883822,0.00077549584,0.005555594,0.00004379199],"about_ca_topic_score_codex":0.0011464598,"about_ca_topic_score_gemma":0.0008568905,"teacher_disagreement_score":0.0026802386,"about_ca_system_score_codex":0.00019100012,"about_ca_system_score_gemma":0.0002146897,"threshold_uncertainty_score":0.008966327},"labels":[],"label_agreement":null},{"id":"W4407152395","doi":"10.1186/s13148-025-01821-3","title":"Age-related changes in DNA methylation in a sample of elderly Brazilians","year":2025,"lang":"en","type":"article","venue":"Clinical Epigenetics","topic":"Epigenetics and DNA Methylation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"SickKids Foundation; Hospital for Sick Children; University of Toronto; Hatch (Canada)","funders":"Natural Sciences and Engineering Research Council of Canada; Hospital for Sick Children; Conselho Nacional de Desenvolvimento Científico e Tecnológico; McLaughlin Centre, University of Toronto; University of Toronto; Fundação de Amparo à Pesquisa do Estado de São Paulo","keywords":"dNaM; Differentially methylated regions; DNA methylation; CpG site; Biology; Methylation; Genetics; Genome-wide association study; Epigenetics; Gene; Genotype; Gene expression; Single-nucleotide polymorphism","score_opus":0.028888826010801075,"score_gpt":0.36321153700111053,"score_spread":0.33432271099030947,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4407152395","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99863523,0.0004201775,0.00015690639,0.000038480146,0.0000028669097,0.000012846001,0.00040293764,0.0000032508967,0.00032720008],"genre_scores_gemma":[0.9988506,0.0003621,0.00021219194,0.000038884868,0.0000040549694,0.000018862314,0.0003422373,0.0000025135125,0.00016855866],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99979323,0.00004348782,0.000018292936,0.00006736559,0.000041017454,0.00003667707],"domain_scores_gemma":[0.9996076,0.000056608907,0.00013200281,0.000051399664,0.00010446734,0.000047828587],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005463114,0.00025709785,0.00040296646,0.00081100303,0.00045258238,0.000296251,0.0002865086,0.00028864635,0.0008570334],"category_scores_gemma":[0.0019726793,0.00023539716,0.00032770235,0.0007512372,0.00026634047,0.00012947209,0.00045589288,0.0001597644,0.00014074962],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000116259274,0.000016752587,0.9896031,0.000050122282,0.000073110496,0.00014983898,0.0013770312,0.00002248722,0.0032094736,0.00004484456,0.000111064845,0.0052259807],"study_design_scores_gemma":[0.0000039333354,0.00004865828,0.9986308,0.000013849831,0.00003764042,0.00023310556,0.00040881187,0.0000421823,0.000107354965,0.000029594556,0.00044150843,0.0000024863084],"about_ca_topic_score_codex":0.05487407,"about_ca_topic_score_gemma":0.06134107,"teacher_disagreement_score":0.05487407,"about_ca_system_score_codex":0.00037457058,"about_ca_system_score_gemma":0.0003026749,"threshold_uncertainty_score":0.10910934},"labels":[],"label_agreement":null},{"id":"W4407833096","doi":"10.1186/s13148-025-01828-w","title":"Systematic review on the DNA methylation role in endometriosis: current evidence and perspectives","year":2025,"lang":"en","type":"review","venue":"Clinical Epigenetics","topic":"Endometriosis Research and Treatment","field":"Medicine","cited_by":24,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"DNA methylation; Human genetics; Endometriosis; Reproductive medicine; Medicine; Bioinformatics; Biology; Computational biology; Genetics; Gynecology; Pregnancy; Gene","score_opus":0.24631760387218987,"score_gpt":0.512389711962352,"score_spread":0.2660721080901621,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4407833096","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0009030537,0.99605334,0.0003026272,0.0009923619,0.00022820766,0.00045306262,0.00075027917,0.000014223017,0.0003028449],"genre_scores_gemma":[0.017900666,0.9777256,0.0012457204,0.0013437849,0.0001831383,0.0009690275,0.00049863424,0.00000989569,0.00012349934],"study_design_codex":"systematic_review","study_design_gemma":"systematic_review","domain_scores_codex":[0.9745126,0.00898216,0.010723584,0.0016142043,0.0035662318,0.00060120417],"domain_scores_gemma":[0.8883987,0.084881425,0.017175667,0.0016322465,0.0071066935,0.0008053219],"candidate_categories":["metaepi_broad"],"consensus_categories":[],"category_scores_codex":[0.025683926,0.0019352012,0.010608338,0.019297091,0.0008329712,0.004102013,0.0031664951,0.0027507218,0.006529397],"category_scores_gemma":[0.11026395,0.0012761682,0.008256556,0.016954295,0.0017947502,0.0040971595,0.0024447714,0.0015096298,0.0006023042],"study_design_candidate":"systematic_review","study_design_consensus":"systematic_review","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010696115,0.000005189065,0.0006415335,0.9767659,0.0060600312,0.00008586395,0.00014335812,0.000057837795,0.000119686345,0.00019552208,0.0010954839,0.01472259],"study_design_scores_gemma":[0.00010529173,0.00007279614,0.0027287179,0.940102,0.04531611,0.00021147127,0.00021997525,0.0000583816,0.000103185404,0.00035063302,0.010708986,0.00002254777],"about_ca_topic_score_codex":0.007539477,"about_ca_topic_score_gemma":0.02407661,"teacher_disagreement_score":0.9893917,"about_ca_system_score_codex":0.004911743,"about_ca_system_score_gemma":0.016784962,"threshold_uncertainty_score":0.13583118},"labels":[],"label_agreement":null},{"id":"W4408249055","doi":"10.1186/s13148-025-01839-7","title":"Maternal epigenetic index links early neglect to later neglectful care and other psychopathological, cognitive, and bonding effects","year":2025,"lang":"en","type":"article","venue":"Clinical Epigenetics","topic":"Child Abuse and Trauma","field":"Psychology","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Montreal Neurological Institute and Hospital","funders":"National Institute on Minority Health and Health Disparities","keywords":"Neglect; Psychopathology; Cognition; Index (typography); Human genetics; Medicine; Clinical psychology; Epigenetics; Psychiatry; Psychology; Developmental psychology; Biology; Genetics","score_opus":0.02918277350713627,"score_gpt":0.3743166797466753,"score_spread":0.34513390623953905,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4408249055","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99913436,0.00011334043,0.00030061466,0.000026524456,0.0000016573865,0.0000036408073,0.00015627351,0.000004565938,0.00025901906],"genre_scores_gemma":[0.999238,0.00007548018,0.0003507578,0.000008881216,0.0000020659045,0.0000063463317,0.00015308523,0.000001646932,0.00016382114],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9998512,0.000033825956,0.000015320744,0.000043443124,0.00003019362,0.000025938107],"domain_scores_gemma":[0.99932885,0.00010528473,0.00040797755,0.00004593596,0.00004976278,0.00006209803],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003372078,0.00029103967,0.00015964881,0.00051839737,0.00022172906,0.0002496111,0.0001939796,0.00017924626,0.0021286781],"category_scores_gemma":[0.0017748111,0.00011456855,0.00025132886,0.00047372762,0.00019484601,0.0001327006,0.00045001906,0.0003080795,0.000075593576],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012353528,0.000021515625,0.9939944,0.000010720977,0.000056952067,0.00010108487,0.00010349733,0.000057683555,0.0019480088,0.000038076683,0.000039114107,0.0035055045],"study_design_scores_gemma":[8.371022e-7,0.000027605469,0.9991373,0.0000038039434,0.000024054736,0.00015396565,0.00005729316,0.00015610088,0.00032834418,0.00005070353,0.000058808768,0.0000011515195],"about_ca_topic_score_codex":0.0029826984,"about_ca_topic_score_gemma":0.0040328894,"teacher_disagreement_score":0.0029826984,"about_ca_system_score_codex":0.00027722443,"about_ca_system_score_gemma":0.0002505343,"threshold_uncertainty_score":0.0071212053},"labels":[],"label_agreement":null},{"id":"W4409916376","doi":"10.1186/s13148-025-01879-z","title":"Reverse genotyping: unveiling Alu element insertion as a new cause of Kabuki syndrome using DNA methylation signature","year":2025,"lang":"en","type":"article","venue":"Clinical Epigenetics","topic":"Genomics and Rare Diseases","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"London Health Sciences Centre","funders":"Genome Canada","keywords":"Kabuki; Genotyping; Alu element; Human genetics; Kabuki syndrome; Genetics; DNA methylation; Biology; Signature (topology); Medicine; Computational biology; Genotype; Gene; Human genome; Genome","score_opus":0.03993634795539735,"score_gpt":0.3700251259918047,"score_spread":0.33008877803640735,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4409916376","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9848835,0.0010017717,0.010675417,0.00027487296,0.00003893935,0.000043276777,0.0005316321,0.0001939747,0.0023566824],"genre_scores_gemma":[0.99288553,0.0003408673,0.005575239,0.000092077775,0.000018996629,0.000011722305,0.00023200351,0.000031409523,0.00081217673],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.999752,0.000034184268,0.000021795091,0.00010416018,0.00005495838,0.000032872274],"domain_scores_gemma":[0.9997336,0.000099459445,0.000048240003,0.00003124441,0.000045011348,0.000042364492],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00024248935,0.0004222675,0.00022890659,0.0012229681,0.00020852471,0.00036853744,0.00027678156,0.0007201367,0.0011901418],"category_scores_gemma":[0.0010068158,0.00014884188,0.00017257255,0.00034016088,0.00026809532,0.00018460125,0.0002778309,0.00039350303,0.00037178874],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0004614504,0.00005171911,0.17370565,0.0001679238,0.00007745337,0.035608962,0.0008965712,0.00042502367,0.73787093,0.0010133766,0.0004514303,0.049269445],"study_design_scores_gemma":[0.00004091878,0.0006784779,0.29804888,0.00012814564,0.0003828118,0.29504454,0.0008031636,0.0098355375,0.37500668,0.0017580985,0.018191755,0.000081044855],"about_ca_topic_score_codex":0.0009889478,"about_ca_topic_score_gemma":0.0010390418,"teacher_disagreement_score":0.0012229681,"about_ca_system_score_codex":0.00015117595,"about_ca_system_score_gemma":0.00013725644,"threshold_uncertainty_score":0.003981471},"labels":[],"label_agreement":null},{"id":"W4410019298","doi":"10.1186/s13148-025-01865-5","title":"DNA methylation in melanoma immunotherapy: mechanisms and therapeutic opportunities","year":2025,"lang":"en","type":"review","venue":"Clinical Epigenetics","topic":"Epigenetics and DNA Methylation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Yale Center for Clinical Investigation, Yale School of Medicine; Fonds de Recherche du Québec - Santé; Melanoma Research Alliance; Canadian Institutes of Health Research; National Cancer Institute; National Institutes of Health; Yale University; American Skin Association","keywords":"DNA methylation; Biology; Cancer research; Melanoma; Methylation; Immune system; Immunotherapy; Immunology; DNA; Genetics; Gene; Gene expression","score_opus":0.11869250174780736,"score_gpt":0.40648580929589484,"score_spread":0.28779330754808746,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4410019298","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000074146956,0.99845135,0.00010721751,0.00042455483,0.0003162244,0.0000038775597,0.000007691669,0.0000054933826,0.0006093336],"genre_scores_gemma":[0.0005620619,0.99806994,0.00015138321,0.00038572395,0.00029876587,0.0000074587438,0.000018079078,0.00000133644,0.0005052986],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9998375,0.000037832822,0.000020059853,0.000027849339,0.00005648025,0.000020293255],"domain_scores_gemma":[0.99973315,0.0001317912,0.000027713913,0.000008852511,0.000061631596,0.000036772857],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00076981506,0.0007335142,0.0009744527,0.0016822201,0.00026939128,0.00083576335,0.0009571453,0.0014928805,0.0028097872],"category_scores_gemma":[0.00073714857,0.0002702124,0.0004550215,0.0011306868,0.00057338184,0.0013669032,0.0007325093,0.0026503734,0.0015436837],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009004984,0.00008100835,0.00012748303,0.008399734,0.00006537772,0.00018638239,0.00004861212,0.00046651374,0.0020277763,0.0060690194,0.033696353,0.9487417],"study_design_scores_gemma":[0.000029403438,0.00012734906,0.0005017612,0.0023137357,0.00006519103,0.0010656312,0.000038000904,0.0001394422,0.00053594616,0.0034815664,0.99168605,0.000015946263],"about_ca_topic_score_codex":0.0006301921,"about_ca_topic_score_gemma":0.0016206161,"teacher_disagreement_score":0.0028097872,"about_ca_system_score_codex":0.000700419,"about_ca_system_score_gemma":0.00087278115,"threshold_uncertainty_score":0.009399712},"labels":[],"label_agreement":null},{"id":"W4412095484","doi":"10.1186/s13148-025-01893-1","title":"Alcohol consumption and DNA methylation: an epigenome-wide association study within the French E3N cohort","year":2025,"lang":"en","type":"article","venue":"Clinical Epigenetics","topic":"Epigenetics and DNA Methylation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hôpital du Saint-Sacrement; Université Laval; Quebec - Clinical Research Organization in Cancer","funders":"Institut Gustave-Roussy; Mutuelle Générale de l'Education Nationale; Ligue Contre le Cancer; Institut National de la Santé et de la Recherche Médicale; Agence Nationale de la Recherche","keywords":"Epigenome; DNA methylation; Human genetics; Alcohol consumption; Methylation; Cohort study; Cohort; Medicine; Biology; Genetics; Internal medicine; DNA; Alcohol; Gene; Gene expression","score_opus":0.0420633297703761,"score_gpt":0.374484933585807,"score_spread":0.3324216038154309,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4412095484","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99757046,0.0006382495,0.00035079746,0.000102779566,0.0000047091576,0.000011824199,0.0009568007,0.00000908282,0.00035521548],"genre_scores_gemma":[0.998212,0.00026658332,0.00033269633,0.00006625255,0.0000063407097,0.000017885859,0.00070766837,0.000004258868,0.00038638746],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99932337,0.00022957695,0.000027281338,0.00019778807,0.000102641636,0.00011936949],"domain_scores_gemma":[0.99942255,0.00013878134,0.00013704589,0.000096092605,0.0001098389,0.00009572109],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0015758331,0.00035061402,0.00041873462,0.00068647333,0.00061027205,0.0005653228,0.00040073157,0.00060479756,0.001299196],"category_scores_gemma":[0.0014097905,0.00022388592,0.00076174055,0.0010482221,0.00027696526,0.00022287639,0.00040793399,0.000355543,0.00013311718],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000426406,0.000037134683,0.9938023,0.000015460297,0.00045420649,0.00021669487,0.00016276025,0.00014738925,0.0011743418,0.000072842064,0.00036476372,0.00312566],"study_design_scores_gemma":[0.000016673694,0.000042509688,0.99891937,0.000005038163,0.00007885787,0.00013405147,0.000047317364,0.0001896138,0.00006621899,0.000022117976,0.0004737934,0.0000045391866],"about_ca_topic_score_codex":0.1509411,"about_ca_topic_score_gemma":0.1661772,"teacher_disagreement_score":0.1509411,"about_ca_system_score_codex":0.0012741782,"about_ca_system_score_gemma":0.00078099384,"threshold_uncertainty_score":0.30012506},"labels":[],"label_agreement":null},{"id":"W4412193379","doi":"10.1186/s13148-025-01930-z","title":"Multiple highly methylated CpG sites as potential epigenetic markers for the diagnosis of prostate cancer","year":2025,"lang":"en","type":"article","venue":"Clinical Epigenetics","topic":"Epigenetics and DNA Methylation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Cytodiagnostics (Canada)","funders":"Région Normandie; Bpifrance","keywords":"Epigenetics; Prostate cancer; Human genetics; CpG site; Cancer; DNA methylation; Medicine; Biology; Bioinformatics; Computational biology; Genetics; Oncology; Internal medicine; Gene; Gene expression","score_opus":0.029404047603582062,"score_gpt":0.3678224917726972,"score_spread":0.33841844416911515,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4412193379","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.96991235,0.007129117,0.016973963,0.00020047335,0.000026076963,0.000046352237,0.003919164,0.00020784709,0.0015845692],"genre_scores_gemma":[0.9837442,0.0010218921,0.012483279,0.00007015733,0.00001523797,0.00003561376,0.0019855232,0.000015931622,0.0006280792],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9998621,0.00002238666,0.0000072199614,0.000050560284,0.000042540352,0.000015111241],"domain_scores_gemma":[0.9997737,0.00007423892,0.00008029415,0.000014050535,0.000034290115,0.00002340009],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00032322903,0.0002478028,0.00023695134,0.0006703441,0.0001369295,0.00028837018,0.0002379611,0.00023611194,0.0014525433],"category_scores_gemma":[0.00043034044,0.0001284191,0.00023225106,0.00061442156,0.00016024758,0.00013623846,0.00028043255,0.00033270987,0.00023799989],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00076399295,0.000072221286,0.20653288,0.00057886424,0.00027180856,0.00012029427,0.0000966048,0.002924724,0.7375595,0.00028228262,0.00050596544,0.050290875],"study_design_scores_gemma":[0.000046614776,0.00058477843,0.69498503,0.00008356697,0.00057013135,0.0009042287,0.00018786329,0.020694975,0.27381325,0.0012462104,0.0068411324,0.000042229654],"about_ca_topic_score_codex":0.0008216027,"about_ca_topic_score_gemma":0.002464167,"teacher_disagreement_score":0.0014525433,"about_ca_system_score_codex":0.00023773158,"about_ca_system_score_gemma":0.00020340795,"threshold_uncertainty_score":0.004859209},"labels":[],"label_agreement":null},{"id":"W4413309292","doi":"10.1186/s13148-025-01951-8","title":"DNA methylation of food sensitization in a French-Canadian population","year":2025,"lang":"en","type":"article","venue":"Clinical Epigenetics","topic":"Food Allergy and Anaphylaxis Research","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Centre Intégré Universitaire de Santé et de Services Sociaux du Saguenay–Lac-Saint-Jean; Université du Québec à Chicoutimi","funders":"Agence Nationale de la Recherche; Canadian Institutes of Health Research; European Commission; Wellcome Trust; Université du Québec à Chicoutimi","keywords":"Human genetics; DNA methylation; Population; Sensitization; Medicine; Biology; Environmental health; Genetics; Immunology; Gene","score_opus":0.04941998358415456,"score_gpt":0.3873342877562915,"score_spread":0.3379143041721369,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4413309292","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9931104,0.00160985,0.00023848662,0.00044969027,0.000020769012,0.000032293083,0.0024697976,0.00002398985,0.0020448335],"genre_scores_gemma":[0.9965874,0.00078654394,0.00024917474,0.00017723443,0.000011687191,0.000013952923,0.00086234644,0.0000083530085,0.001303438],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9993741,0.000049062135,0.00002529079,0.00020640335,0.0001608075,0.00018434526],"domain_scores_gemma":[0.9994974,0.000034874687,0.000066029475,0.000031129668,0.00023529584,0.00013526602],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006315332,0.0006836395,0.0005135028,0.0017009557,0.003291066,0.0010162436,0.0008035685,0.0007498683,0.0030908433],"category_scores_gemma":[0.001033333,0.00036982543,0.0008224412,0.002274482,0.00068475254,0.00023085004,0.0005509899,0.00058338075,0.0002449798],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00034165723,0.000053794738,0.97834516,0.00008544914,0.00021784956,0.0007904182,0.0023478142,0.00018806799,0.0030401289,0.00033202762,0.002552332,0.011705337],"study_design_scores_gemma":[0.000017494824,0.00007304144,0.99409723,0.00004052838,0.00009208671,0.00078428123,0.0011797788,0.0003030135,0.00016831467,0.000057945417,0.0031564995,0.000029783689],"about_ca_topic_score_codex":0.9786486,"about_ca_topic_score_gemma":0.97308517,"teacher_disagreement_score":0.021351397,"about_ca_system_score_codex":0.010195803,"about_ca_system_score_gemma":0.008264779,"threshold_uncertainty_score":0.0739761},"labels":[],"label_agreement":null},{"id":"W4414779670","doi":"10.1186/s13148-025-01959-0","title":"Comprehensive comparison of enzymatic and bisulfite DNA methylation analysis in clinically relevant samples","year":2025,"lang":"en","type":"article","venue":"Clinical Epigenetics","topic":"Epigenetics and DNA Methylation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Newborn Screening Ontario","funders":"AstraZeneca","keywords":"DNA methylation; Methylation; Bisulfite sequencing; Human genetics; Enzyme; DNA","score_opus":0.06049477719509665,"score_gpt":0.42093644241768013,"score_spread":0.3604416652225835,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4414779670","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9149819,0.0047329175,0.07041499,0.00032107212,0.000077623794,0.0005777639,0.00518848,0.0006414706,0.0030637614],"genre_scores_gemma":[0.92678374,0.0012027059,0.06019883,0.00040738325,0.00004643683,0.00069114217,0.009331087,0.00014492254,0.0011937709],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9962063,0.001129968,0.00027585705,0.00087209966,0.001400963,0.00011478066],"domain_scores_gemma":[0.99780256,0.0008126579,0.00042049208,0.00033764617,0.000542689,0.00008407019],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0046714945,0.0004953787,0.00041915194,0.00081931666,0.00030940818,0.00077986607,0.0004824775,0.0006526243,0.00087216485],"category_scores_gemma":[0.005178475,0.00026558075,0.00038844047,0.0005591188,0.0005025012,0.00022199878,0.0006336706,0.00056738843,0.0003012708],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0019195693,0.0002931146,0.05006916,0.0005744277,0.00083227974,0.00008243562,0.00034797666,0.0044378177,0.88941675,0.00060962205,0.00089913514,0.050517593],"study_design_scores_gemma":[0.00016438826,0.0030763377,0.13643585,0.00006793709,0.000708826,0.00085513375,0.00011360062,0.009492204,0.836127,0.0009343948,0.011962376,0.00006200242],"about_ca_topic_score_codex":0.00084706844,"about_ca_topic_score_gemma":0.001911521,"teacher_disagreement_score":0.0046714945,"about_ca_system_score_codex":0.000449682,"about_ca_system_score_gemma":0.00073831633,"threshold_uncertainty_score":0.02470553},"labels":[],"label_agreement":null},{"id":"W4414781793","doi":"10.1186/s13148-025-01972-3","title":"In-utero exposure to maternal diabetes and DNA methylation alterations in the Next Generation birth cohort","year":2025,"lang":"en","type":"article","venue":"Clinical Epigenetics","topic":"Gestational Diabetes Research and Management","field":"Medicine","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Manitoba Health; University of Manitoba; Children's Hospital Research Institute of Manitoba","funders":"Canadian Institutes of Health Research; Children's Hospital Research Institute of Manitoba; Diabetes Canada","keywords":"dNaM; DNA methylation; Diabetes mellitus; Pregnancy; Human genetics; Epigenetics; Type 2 diabetes; Cohort study","score_opus":0.08152934980404476,"score_gpt":0.39737802933273236,"score_spread":0.3158486795286876,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4414781793","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99178493,0.0012100526,0.0010443489,0.00011488195,0.000025473713,0.0000151275335,0.0051647993,0.000016521313,0.0006238665],"genre_scores_gemma":[0.99538016,0.0005037074,0.00074885634,0.000053204414,0.000012026807,0.000026792815,0.0026835012,0.000006162959,0.00058571954],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9996668,0.00007480098,0.000021424445,0.0001342182,0.000054493135,0.00004831316],"domain_scores_gemma":[0.99944633,0.000110117246,0.0001695887,0.00010311936,0.00007126036,0.000099640165],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00067447167,0.00023988941,0.00025053383,0.00041914755,0.00034643424,0.0004254123,0.00036027565,0.00029903077,0.0016863742],"category_scores_gemma":[0.0018501777,0.000184578,0.00051346805,0.0008023825,0.00012734723,0.00014590597,0.00044714342,0.0003716004,0.00012178378],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00020587814,0.000012313954,0.99546117,0.000025646503,0.0004561168,0.00011091601,0.00006716338,0.00013524202,0.0011762212,0.00005792783,0.00024162207,0.0020498221],"study_design_scores_gemma":[0.0000040839186,0.000026485417,0.9988938,0.0000083292225,0.00013203717,0.00014316065,0.000027666783,0.00015370105,0.00013540934,0.00003097617,0.00044219635,0.0000022458287],"about_ca_topic_score_codex":0.022585616,"about_ca_topic_score_gemma":0.020470228,"teacher_disagreement_score":0.022585616,"about_ca_system_score_codex":0.00024020916,"about_ca_system_score_gemma":0.0003556791,"threshold_uncertainty_score":0.044908345},"labels":[],"label_agreement":null},{"id":"W4417499830","doi":"10.1186/s13148-025-02021-9","title":"The role of placental DNA methylation in the pathogenesis of chronic intervillositis of unknown etiology","year":2025,"lang":"en","type":"article","venue":"Clinical Epigenetics","topic":"Pregnancy and preeclampsia studies","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Children's & Women's Health Centre of British Columbia; University of British Columbia Hospital; BC Children's Hospital; University of British Columbia","funders":"Canadian Institutes of Health Research; BC Children's Hospital","keywords":"Pathogenesis; Human genetics; Etiology; DNA methylation; Infiltration (HVAC); Placenta; Pregnancy","score_opus":0.02645419857881382,"score_gpt":0.35877780556010636,"score_spread":0.33232360698129254,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4417499830","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9667486,0.025661232,0.0046349727,0.00033596254,0.000025536912,0.000022672313,0.00037556075,0.00004675906,0.0021486618],"genre_scores_gemma":[0.99562526,0.0028994118,0.0009697908,0.000034328135,0.0000148009185,0.000009563201,0.00012254786,0.0000072161497,0.00031699854],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99971384,0.000095776835,0.000017566374,0.00007704308,0.000053127922,0.000042668482],"domain_scores_gemma":[0.99957675,0.00008506498,0.0002316548,0.00003474953,0.00003263778,0.0000391457],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00054949935,0.00028532284,0.00024297164,0.0007527884,0.00019255182,0.00048252995,0.0003674531,0.00027647297,0.0013178017],"category_scores_gemma":[0.0011793145,0.00019789548,0.00020566316,0.0005570902,0.0004391569,0.00024573097,0.00041387934,0.00030924304,0.00013960533],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0014484521,0.00007047834,0.78560424,0.0005030607,0.00038218865,0.0020188629,0.00056702405,0.0006429236,0.14617535,0.0010648267,0.00039255864,0.061130013],"study_design_scores_gemma":[0.000021893937,0.0002136851,0.97906756,0.0001464545,0.00013390103,0.0031898844,0.000332037,0.0013131677,0.01196941,0.0009090909,0.0026896675,0.000013204697],"about_ca_topic_score_codex":0.0010880796,"about_ca_topic_score_gemma":0.00088324404,"teacher_disagreement_score":0.0013178017,"about_ca_system_score_codex":0.0003324927,"about_ca_system_score_gemma":0.00022338271,"threshold_uncertainty_score":0.0044084787},"labels":[],"label_agreement":null}]}