{"meta":{"query_hash":"cbc6b9988ea5","filters":{"venue":"EcoSal Plus"},"cohort_total":18,"direct_labels_cover":0,"predictions_cover":18,"exported":18,"export_cap":100000,"truncated":false,"label_status":"direct model label, unvalidated","prediction_status":"machine_predicted_unvalidated (Codex and Gemma teacher distillation)","score_status":"score_only:v0-immature-baseline","snapshot":{"source":"OpenAlex, pinned release, all 482 partitions","release":"2026-06-24","frame_built":"2026-07-12"},"permalink":"https://metacan.xera.ac/q/cbc6b9988ea5","api":"https://metacan.xera.ac/api/v1/cohort?venue=EcoSal+Plus"},"results":[{"id":"W2084067596","doi":"10.1128/ecosalplus.2.2.3","title":"The Cytology of Bacterial Conjugation","year":2004,"lang":"en","type":"article","venue":"EcoSal Plus","topic":"Enterobacteriaceae and Cronobacter Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"Cytology; Biology; Genetics","score_opus":0.008718835699087662,"score_gpt":0.25999375691667614,"score_spread":0.2512749212175885,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2084067596","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99803567,0.00010953484,0.00027811743,0.00029777433,0.00026365303,0.00009541325,0.000011291667,0.000004563499,0.00090397446],"genre_scores_gemma":[0.99923295,0.00009882768,0.00008522006,0.00004730093,0.00020615943,0.000009581166,0.00010746306,0.000008115904,0.00020436067],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9994771,0.00003603103,0.00013537135,0.00012663547,0.00006314692,0.00016172868],"domain_scores_gemma":[0.9996549,0.000009064241,0.00004921924,0.00020645093,0.00004688098,0.000033505505],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00010402183,0.00006243884,0.00007460982,0.0000122317815,0.00006691835,0.000019707546,0.0001600128,0.00006979637,0.00003322277],"category_scores_gemma":[0.00004179501,0.00004595702,0.000045441975,0.00002846012,0.000099067656,0.000002819982,0.000081096194,0.000048260168,0.00002696083],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00035509068,0.000026994876,0.00087472366,0.0000069957646,0.000037912472,0.0000015824445,0.000046219273,0.000025376754,0.99577487,0.0009927952,0.00064248056,0.0012149701],"study_design_scores_gemma":[0.0019522641,0.00056811405,0.010541873,0.000009640977,0.000008673085,0.000022917633,0.00010017592,0.000004732205,0.9174761,0.00073058694,0.06845788,0.00012702063],"about_ca_topic_score_codex":0.000026479835,"about_ca_topic_score_gemma":0.00030080034,"teacher_disagreement_score":0.07829874,"about_ca_system_score_codex":0.000016185428,"about_ca_system_score_gemma":0.00010107781,"threshold_uncertainty_score":0.18740728},"labels":[],"label_agreement":null},{"id":"W2313014255","doi":"10.1128/ecosalplus.8.8.3","title":"NLRs: Nucleotide-Binding Domain and Leucine-Rich-Repeat-Containing Proteins","year":2009,"lang":"en","type":"article","venue":"EcoSal Plus","topic":"Endoplasmic Reticulum Stress and Disease","field":"Biochemistry, Genetics and Molecular Biology","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Leucine-rich repeat; Computational biology; Nucleotide; Domain (mathematical analysis); Genetics; Biology; Gene; Mathematics","score_opus":0.006857056164810363,"score_gpt":0.23304380319690912,"score_spread":0.22618674703209876,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2313014255","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9899451,0.00071156444,0.00036382963,0.00034085542,0.000081872466,0.00022527768,0.000017908116,0.000030102947,0.008283457],"genre_scores_gemma":[0.9975632,0.0000749572,0.001204005,0.00038954825,0.00024939646,0.000014887338,0.000069662645,0.000017683722,0.00041669366],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99899876,0.000033546334,0.00018551313,0.00037490862,0.00010609371,0.00030116283],"domain_scores_gemma":[0.99947214,0.000009089282,0.00006813672,0.0002499636,0.000027145123,0.00017355193],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000113534545,0.00017438472,0.00016049424,0.000039382678,0.00012564655,0.00005837522,0.00011344535,0.000095763826,0.000028503118],"category_scores_gemma":[0.000079044854,0.0001614476,0.00006373491,0.00005418331,0.00004423148,0.000007939656,0.0000686271,0.00009014833,0.000018374383],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0009021854,0.00021980498,0.01671411,0.000082286955,0.00013512307,0.00029382078,0.0005785295,0.00025372684,0.9546668,0.0036743828,0.0069577163,0.015521518],"study_design_scores_gemma":[0.022152672,0.007805348,0.10138141,0.0005571688,0.00032462354,0.0005563108,0.0037341956,0.0018564633,0.77182645,0.009648383,0.075805634,0.0043513183],"about_ca_topic_score_codex":0.000016212947,"about_ca_topic_score_gemma":0.000022553684,"teacher_disagreement_score":0.18284033,"about_ca_system_score_codex":0.000020580796,"about_ca_system_score_gemma":0.000059636015,"threshold_uncertainty_score":0.65836424},"labels":[],"label_agreement":null},{"id":"W2313263429","doi":"10.1128/ecosalplus.8.7.8","title":"Shiga Toxins: Potent Poisons, Pathogenicity Determinants, and Pharmacological Agents","year":2005,"lang":"en","type":"article","venue":"EcoSal Plus","topic":"Escherichia coli research studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":13,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Centers for Disease Control and Prevention; National Institutes of Health; University of Alberta","keywords":"Shigella dysenteriae; Shiga toxin; Microbiology; Virulence; Biology; Toxin; Bacteria; Vero cell; Escherichia coli; Antibiotics; Virology; Virus; Biochemistry","score_opus":0.022916277881360737,"score_gpt":0.3141339324002311,"score_spread":0.29121765451887033,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2313263429","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9957003,0.0024249756,0.00006035754,0.00065441,0.00008485676,0.00021645661,0.000025268324,0.000019264888,0.0008141071],"genre_scores_gemma":[0.9952965,0.0018477333,0.0008781376,0.0009234274,0.00036671,0.000025205018,0.000014618845,0.000013765976,0.00063392846],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9989157,0.00007837821,0.00015884222,0.0003470814,0.00014610983,0.00035392633],"domain_scores_gemma":[0.99959826,0.000015611342,0.000041318777,0.000152538,0.000040642768,0.0001516357],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00019249597,0.0001528325,0.00015475728,0.00002173522,0.00013646553,0.0000264447,0.00016733668,0.00010795757,0.000041459272],"category_scores_gemma":[0.0001328261,0.00012916401,0.00006361412,0.00004842029,0.000094428564,0.0000057528678,0.0004106139,0.00013437499,0.000031655218],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00046753863,0.00037584343,0.030158075,0.000044502125,0.0002507796,0.00012752239,0.0001626122,0.00007601531,0.87143743,0.00004578758,0.035349686,0.06150422],"study_design_scores_gemma":[0.0049630934,0.0014450279,0.258727,0.00003178714,0.0001236492,0.00015521914,0.0002311263,0.007503541,0.29299602,0.000091894486,0.43258864,0.0011430017],"about_ca_topic_score_codex":0.0000077309505,"about_ca_topic_score_gemma":0.00015822008,"teacher_disagreement_score":0.5784414,"about_ca_system_score_codex":0.00003603654,"about_ca_system_score_gemma":0.00005718733,"threshold_uncertainty_score":0.5267155},"labels":[],"label_agreement":null},{"id":"W2320619838","doi":"10.1128/ecosalplus.2.2.2","title":"Intracellular Voyeurism: Examining the Modulation of Host Cell Activities by <i>Salmonella enterica Serovar Typhimurium</i>","year":2005,"lang":"en","type":"article","venue":"EcoSal Plus","topic":"Salmonella and Campylobacter epidemiology","field":"Agricultural and Biological Sciences","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canada Research Chairs; University of Toronto; University of New Brunswick; Hospital for Sick Children","funders":"","keywords":"Salmonella enterica; Salmonella; Serotype; Voyeurism; Intracellular; Host (biology); Microbiology; Modulation (music); Biology; Cell biology; Bacteria; Ecology; Genetics; Physics; Medicine","score_opus":0.016851380089305184,"score_gpt":0.204855801896708,"score_spread":0.18800442180740282,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2320619838","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9958251,0.00066486315,0.00005338625,0.0012266746,0.00016757935,0.00015180241,0.000040759634,0.00005126119,0.0018185693],"genre_scores_gemma":[0.9980732,0.00013530435,0.000110761706,0.00037444397,0.00043273257,0.0000103562525,0.00007186021,0.0000024809979,0.00078885135],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99873286,0.00018762301,0.00032888213,0.0002847428,0.00015253913,0.00031334715],"domain_scores_gemma":[0.99913925,0.00045137084,0.00021130555,0.00010504724,0.000026726248,0.00006632113],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00034933898,0.00017375567,0.0002634026,0.000009992043,0.00013711164,0.000027536513,0.00030166065,0.00012771948,0.00030110203],"category_scores_gemma":[0.000026386324,0.000066930625,0.00008472214,0.00016074216,0.00009699106,0.00013770006,0.000089124784,0.00016659204,0.000057439924],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000049125327,0.00007682347,0.006851099,0.0000061641745,0.000013456637,0.0000016016784,0.00020371065,0.00021300772,0.9727932,0.00002092839,0.007831854,0.011939026],"study_design_scores_gemma":[0.0009048679,0.0010479323,0.32091704,0.000041740997,0.000077415076,0.000041960076,0.0016515297,0.010298557,0.46745795,0.0003470819,0.19627503,0.00093889557],"about_ca_topic_score_codex":0.00013902808,"about_ca_topic_score_gemma":0.00006457769,"teacher_disagreement_score":0.5053353,"about_ca_system_score_codex":0.000036594345,"about_ca_system_score_gemma":0.000008063733,"threshold_uncertainty_score":0.3296856},"labels":[],"label_agreement":null},{"id":"W2322843152","doi":"10.1128/ecosalplus.4.7.3","title":"Structure and Assembly of <i>Escherichia coli</i> Capsules","year":2009,"lang":"en","type":"article","venue":"EcoSal Plus","topic":"Bacteriophages and microbial interactions","field":"Environmental Science","cited_by":26,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"","keywords":"Escherichia coli; Biology; Cell envelope; Bacterial outer membrane; Cell wall; Antigen; Capsule; Cytosol; Cell biology; Gene; Microbiology; Genetics; Biochemistry; Enzyme; Botany","score_opus":0.005694569754910039,"score_gpt":0.2175713639139431,"score_spread":0.21187679415903307,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2322843152","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9938778,0.000034381424,0.00003617215,0.00026560118,0.00009694422,0.00005890559,0.00002329248,0.000012789025,0.005594099],"genre_scores_gemma":[0.99806815,0.0000144202795,0.0010057292,0.0004163452,0.000025534122,4.4688204e-7,0.0000042610245,0.000003883829,0.0004612156],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9996312,0.000010008221,0.0000947125,0.00011444872,0.000046385972,0.00010321556],"domain_scores_gemma":[0.999817,0.000008139404,0.000041875504,0.00008493169,0.0000030939016,0.000044949287],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.000022960865,0.000065250904,0.00008881985,0.000008740299,0.000043299628,0.000015974772,0.00006490319,0.000037920996,0.0009352697],"category_scores_gemma":[0.0000057885995,0.000057718604,0.000021758806,0.000057051664,0.000041418425,0.00012930416,0.000034194436,0.00007175515,0.00004041507],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000008634856,0.000014295186,0.00014557622,0.0000017802049,0.000002853405,0.0000017716877,0.00012899288,0.00004150812,0.9937948,0.000048105532,0.0028276653,0.0029840227],"study_design_scores_gemma":[0.0003875241,0.00014897733,0.7259153,0.00001301359,0.00001829381,0.0000254015,0.000054684744,0.00028328103,0.25262767,0.00041805045,0.019923795,0.0001840317],"about_ca_topic_score_codex":0.0002040037,"about_ca_topic_score_gemma":0.00024080335,"teacher_disagreement_score":0.7411671,"about_ca_system_score_codex":0.000031332398,"about_ca_system_score_gemma":0.0000051131315,"threshold_uncertainty_score":0.999978},"labels":[],"label_agreement":null},{"id":"W2323007698","doi":"10.1128/ecosalplus.5.4.7","title":"Envelope Stress Responses","year":2009,"lang":"en","type":"article","venue":"EcoSal Plus","topic":"Salmonella and Campylobacter epidemiology","field":"Agricultural and Biological Sciences","cited_by":41,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"Regulon; rpoS; Biology; Cell envelope; Salmonella enterica; Bacterial outer membrane; Cell biology; Escherichia coli; Polymyxin; Signal transduction; Microbiology; Periplasmic space; Sigma factor; Biochemistry; Gene; Gene expression","score_opus":0.030086237524116637,"score_gpt":0.25166042268537003,"score_spread":0.2215741851612534,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2323007698","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9881925,0.00020355973,0.0000032227604,0.0044041113,0.00015493779,0.00006687802,0.000026028274,0.0000946249,0.0068541635],"genre_scores_gemma":[0.9963868,0.00004328215,0.000082558,0.0018109726,0.0003604353,0.0000026498326,0.000040499228,3.4182892e-7,0.0012724506],"study_design_codex":"design_other","study_design_gemma":"observational","domain_scores_codex":[0.9991848,0.000106311265,0.00015440425,0.00021413897,0.000077317905,0.0002630605],"domain_scores_gemma":[0.99954027,0.00025745883,0.000044513446,0.00004856112,0.000020625414,0.000088598645],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00018481839,0.00009900088,0.00015553528,0.0000068149,0.00009717684,0.000023949126,0.00019768259,0.00008560895,0.0006554493],"category_scores_gemma":[0.000112996815,0.000034374454,0.00006148593,0.00012361369,0.00002494103,0.000060733186,0.000026302252,0.0000853126,0.00029339158],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0008374319,0.00028925852,0.13700223,0.000005507556,0.000035678462,0.00015266924,0.00029894887,0.000030366575,0.21707705,0.00752725,0.050224643,0.58651894],"study_design_scores_gemma":[0.00009202658,0.00023699434,0.9466249,0.000005630363,0.0000034523362,0.0000135349255,0.000058107118,0.000019730747,0.0016752575,0.0030112518,0.048122168,0.00013695692],"about_ca_topic_score_codex":0.00005662214,"about_ca_topic_score_gemma":0.00015343062,"teacher_disagreement_score":0.80962265,"about_ca_system_score_codex":0.000019982406,"about_ca_system_score_gemma":0.000007871987,"threshold_uncertainty_score":0.71767104},"labels":[],"label_agreement":null},{"id":"W2325168078","doi":"10.1128/ecosalplus.3.2.8","title":"<i>S</i> - and <i>N</i> -Oxide Reductases","year":2007,"lang":"en","type":"article","venue":"EcoSal Plus","topic":"Metalloenzymes and iron-sulfur proteins","field":"Energy","cited_by":14,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"Periplasmic space; Protein subunit; Chemistry; Cofactor; Operon; Biochemistry; Fumarate reductase; Nitrate reductase; Escherichia coli; Enzyme; Succinate dehydrogenase","score_opus":0.011865995863044427,"score_gpt":0.23191330247286684,"score_spread":0.2200473066098224,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2325168078","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.858102,0.0016865348,0.00031819422,0.00037139744,0.00033301176,0.00013932068,0.000009680815,0.00014005025,0.13889976],"genre_scores_gemma":[0.9913864,0.00009511591,0.0022535243,0.00092857296,0.0003619708,0.00000606387,0.00001906786,0.000031933756,0.0049173543],"study_design_codex":"theoretical_or_conceptual","study_design_gemma":"not_applicable","domain_scores_codex":[0.9989492,0.000023445295,0.00024151719,0.0002640088,0.0001556667,0.00036611952],"domain_scores_gemma":[0.99942833,0.00006461164,0.00005821205,0.00025627637,0.000020995118,0.0001715437],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00033898067,0.00015127969,0.0001874872,0.000055025455,0.00009595064,0.00003989487,0.00012016637,0.00008036872,0.000416622],"category_scores_gemma":[0.000058366782,0.00013497626,0.00005467614,0.000112778565,0.00006354273,0.0001380105,0.00007963545,0.00012877902,0.00024716434],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00059683353,0.00030077598,0.001163543,0.00016749054,0.00020991635,0.00061712996,0.00089015655,0.00048786728,0.2466856,0.5020442,0.13742845,0.10940807],"study_design_scores_gemma":[0.0009243118,0.000096779186,0.0031175714,0.000020883048,0.000024494086,0.00009318967,0.00013554106,0.00009442755,0.13115199,0.004865356,0.8591247,0.00035075773],"about_ca_topic_score_codex":0.00090786634,"about_ca_topic_score_gemma":0.00083339016,"teacher_disagreement_score":0.72169626,"about_ca_system_score_codex":0.000035973084,"about_ca_system_score_gemma":0.00002662641,"threshold_uncertainty_score":0.55041724},"labels":[],"label_agreement":null},{"id":"W2327011266","doi":"10.1128/ecosal.5.2.3","title":"Modulation of Chemical Composition and Other Parameters of the Cell at Different Exponential Growth Rates","year":2008,"lang":"en","type":"article","venue":"EcoSal Plus","topic":"Bacterial Genetics and Biotechnology","field":"Biochemistry, Genetics and Molecular Biology","cited_by":587,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"Ribosome; RNA; Ribosomal RNA; Exponential growth; Protein biosynthesis; Biology; Messenger RNA; Cell biology; Growth rate; Gene; Biochemistry; Gene expression; Physics","score_opus":0.0093571077764178,"score_gpt":0.19872000772433096,"score_spread":0.18936289994791317,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2327011266","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9995641,0.00007731216,0.000064951906,0.00006419039,0.00008223133,0.00008340154,0.000020740767,0.0000024078697,0.000040632607],"genre_scores_gemma":[0.999633,0.00003805394,0.0002138775,0.000027148515,0.000031507425,0.00000224583,0.0000262971,0.000006233707,0.000021607095],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9996239,0.000020310914,0.00012224815,0.00011663828,0.000046742294,0.000070156886],"domain_scores_gemma":[0.9997634,0.0000044394214,0.00007931163,0.000116652685,0.000020077961,0.000016072692],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000017080529,0.00006499863,0.00009262302,0.0000118151465,0.00002359423,0.0000016948924,0.000068868474,0.00012108358,0.000005924098],"category_scores_gemma":[0.0000047695253,0.000046433717,0.00004281681,0.000021796162,0.00013896936,7.843078e-7,0.00010682702,0.000030440662,4.352041e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009148307,0.00003380712,0.0030252417,0.000010670587,0.000010667776,1.1851889e-7,0.000021667285,0.0000090276735,0.99666715,0.000015214938,0.000071622635,0.000043332733],"study_design_scores_gemma":[0.00038688193,0.00006203782,0.012718314,0.000003884549,0.000007989253,0.0000076079,0.0000027867525,0.00017385084,0.9864919,0.000033582102,0.00005902164,0.00005211703],"about_ca_topic_score_codex":0.0000134052825,"about_ca_topic_score_gemma":0.0000047940443,"teacher_disagreement_score":0.01017522,"about_ca_system_score_codex":0.0000064922388,"about_ca_system_score_gemma":0.0000068024347,"threshold_uncertainty_score":0.1893512},"labels":[],"label_agreement":null},{"id":"W2328357094","doi":"10.1128/ecosalplus.8.8.10","title":"Modulation of Iron Availability at the Host-Pathogen Interface in Phagocytic Cells","year":2006,"lang":"en","type":"article","venue":"EcoSal Plus","topic":"Iron Metabolism and Disorders","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"","keywords":"Ferroportin; Macrophage; Hepcidin; Phagosome; Biology; Cell biology; Intracellular; Microbiology; Lipopolysaccharide; CD14; Spleen; Immune system; Inflammation; Biochemistry; In vitro; Immunology","score_opus":0.009210485462495149,"score_gpt":0.2454322449376067,"score_spread":0.23622175947511156,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2328357094","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99231577,0.0009593653,0.00012360755,0.0002750637,0.00017648801,0.0003479853,0.000018706814,0.00001616785,0.005766824],"genre_scores_gemma":[0.99723965,0.00001589289,0.00011665234,0.0000764187,0.00006396094,0.0000061153087,0.000027491893,0.000010809514,0.002443005],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9992024,0.000053277156,0.00026188538,0.00017072675,0.00015615398,0.00015558132],"domain_scores_gemma":[0.99954164,0.00005030712,0.00007037647,0.00028111052,0.000028356037,0.000028214763],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00024782761,0.00009241839,0.00018977713,0.000046096942,0.000026795611,0.000004346051,0.000065317785,0.00005743593,0.0004087805],"category_scores_gemma":[0.00004482272,0.000065797896,0.000054438682,0.000117324336,0.00007412267,0.00004900859,0.000045645284,0.000092086004,0.00015789435],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.001064225,0.0005417521,0.06992988,0.00042848187,0.00000915814,0.000015602242,0.0015856148,0.012275122,0.90329516,0.00030805435,0.0073669627,0.0031799728],"study_design_scores_gemma":[0.0036459505,0.000106972606,0.90289634,0.000029585543,0.00006280059,0.000006049596,0.00024558435,0.005964316,0.0834564,0.000368992,0.0030614343,0.00015555191],"about_ca_topic_score_codex":0.0005880715,"about_ca_topic_score_gemma":0.0007071938,"teacher_disagreement_score":0.8329665,"about_ca_system_score_codex":0.00012279274,"about_ca_system_score_gemma":0.000056423112,"threshold_uncertainty_score":0.447586},"labels":[],"label_agreement":null},{"id":"W2331796642","doi":"10.1128/ecosalplus.8.8.4","title":"<i>Salmonella</i> and Enteropathogenic <i>Escherichia coli</i> Interactions with Host Cells: Signaling Pathways","year":2006,"lang":"en","type":"article","venue":"EcoSal Plus","topic":"Escherichia coli research studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Inimex Pharmaceuticals (Canada); University of British Columbia","funders":"","keywords":"Salmonella; Enteropathogenic Escherichia coli; Biology; Microbiology; Salmonella enterica; Pathogen; Effector; Virulence; Host (biology); Signal transduction; Cell biology; Bacteria; Gene; Genetics","score_opus":0.008796573099285415,"score_gpt":0.21887351014206194,"score_spread":0.21007693704277652,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2331796642","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9926908,0.0013727669,0.0008986158,0.00010342992,0.00011939769,0.00023233843,0.00004400927,0.000034115365,0.004504508],"genre_scores_gemma":[0.99659395,0.0002218693,0.0015511378,0.00024333198,0.0003285184,0.000058705755,0.00005038083,0.00003963455,0.00091245305],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9988139,0.00006931739,0.00018891577,0.00041172514,0.00015519201,0.00036093366],"domain_scores_gemma":[0.9994683,0.00003185537,0.00007531263,0.0002373991,0.000087738765,0.00009935988],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013595325,0.00021311785,0.00018270254,0.000036206897,0.00019172573,0.00006779573,0.00013719728,0.0000690808,0.000014366117],"category_scores_gemma":[0.000021678394,0.0001869979,0.00005998123,0.00011821241,0.0001255849,0.000009529854,0.00018488812,0.00017882201,0.000018053986],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015369174,0.00006794912,0.001698795,0.000023217743,0.000053617136,0.000023490487,0.000042577776,0.00014544152,0.9949995,0.000036171212,0.0026861758,0.00006932163],"study_design_scores_gemma":[0.0017325667,0.00077563984,0.0048207506,0.000052438183,0.000059265483,0.000050009447,0.0003374937,0.00065947516,0.93029267,0.00005983081,0.060567863,0.00059197604],"about_ca_topic_score_codex":0.0000903243,"about_ca_topic_score_gemma":0.0004869534,"teacher_disagreement_score":0.06470686,"about_ca_system_score_codex":0.000031342388,"about_ca_system_score_gemma":0.00009516646,"threshold_uncertainty_score":0.7625553},"labels":[],"label_agreement":null},{"id":"W2567709866","doi":"10.1128/ecosalplus.esp-0006-2016","title":"Animal Enterotoxigenic<i>Escherichia coli</i>","year":2016,"lang":"en","type":"review","venue":"EcoSal Plus","topic":"Escherichia coli research studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":307,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal","funders":"National Institute of Allergy and Infectious Diseases","keywords":"Enterotoxigenic Escherichia coli; Fimbria; Enterotoxin; Bacterial adhesin; Microbiology; Virulence; Escherichia coli; Biology; Context (archaeology); Heat-stable enterotoxin; Diarrhea; Gene; Genetics; Medicine","score_opus":0.03235226444887322,"score_gpt":0.3378610709811654,"score_spread":0.3055088065322922,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2567709866","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00031098595,0.9917905,0.00006133162,0.000047328358,0.00035164115,0.0010828222,0.00020509098,0.000042507356,0.00610784],"genre_scores_gemma":[0.00009678233,0.9917156,0.00021630616,0.00013384964,0.0013096649,0.00056845567,0.00017831846,0.00013086613,0.0056501427],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99735886,0.00026748196,0.0005185774,0.00083218794,0.00029474904,0.0007281706],"domain_scores_gemma":[0.9986132,0.00005927098,0.0002456604,0.0007583904,0.000100284655,0.00022318983],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0003108466,0.00061200187,0.001196837,0.000079073936,0.0001415566,0.000059863014,0.0007501335,0.0005156688,0.00013797355],"category_scores_gemma":[0.00025166967,0.0004434522,0.00068199856,0.00017482371,0.00016253087,0.0000046666396,0.0008801757,0.00037378393,0.0006782819],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00032999038,0.00025656875,0.0000224559,0.01354634,0.002987763,0.00013518895,0.000045424124,3.8325365e-7,0.013342317,0.00030100418,0.17436314,0.79466945],"study_design_scores_gemma":[0.00035247236,0.0003259187,0.0000054651255,0.0014089284,0.00010936121,0.00001591974,0.000004089321,0.0000012521414,0.00018407234,0.000007957035,0.99707943,0.00050514186],"about_ca_topic_score_codex":0.0000069408557,"about_ca_topic_score_gemma":0.00003343944,"teacher_disagreement_score":0.8227163,"about_ca_system_score_codex":0.00013706894,"about_ca_system_score_gemma":0.0008230634,"threshold_uncertainty_score":0.9998017},"labels":[],"label_agreement":null},{"id":"W2953010236","doi":"10.1128/ecosalplus.esp-0003-2019","title":"Plasmid Localization and Partition in <i>Enterobacteriaceae</i>","year":2019,"lang":"en","type":"review","venue":"EcoSal Plus","topic":"Bacterial Genetics and Biotechnology","field":"Biochemistry, Genetics and Molecular Biology","cited_by":74,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Agence Nationale de la Recherche","keywords":"Plasmid; Replicon; Biology; Partition (number theory); Enterobacteriaceae; Nucleoid; Genetics; Computational biology; Escherichia coli; Gene; Mathematics","score_opus":0.023089477986064783,"score_gpt":0.2771583679101696,"score_spread":0.2540688899241048,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2953010236","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0052854507,0.9932804,0.00009413596,0.000025172421,0.00059287896,0.0004720568,0.000066018205,0.000012775636,0.00017108412],"genre_scores_gemma":[0.0012308572,0.99657637,0.000041477306,0.0000668224,0.00019322567,0.00003351577,0.0016609563,0.000035631776,0.00016112607],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9989025,0.0000661237,0.0003207098,0.000429433,0.000047846675,0.00023336026],"domain_scores_gemma":[0.9995736,0.000004977122,0.000100651174,0.0002653858,0.000016020997,0.000039366074],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00010102045,0.00024177278,0.0005446421,0.00008827775,0.000022941818,0.000033592853,0.00013254443,0.00071452046,0.00002300455],"category_scores_gemma":[0.0000138694995,0.00019350945,0.00009003857,0.00006922887,0.000045939887,0.0000022913905,0.00020542962,0.0001374234,0.000066399996],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001308589,0.00014703277,0.000105400744,0.011803018,0.00022173235,0.000019832736,0.00003294077,0.00003779647,0.011651077,0.00020046889,0.004053342,0.9715965],"study_design_scores_gemma":[0.00027876705,0.000144627,0.000005721561,0.00059251906,0.000059064216,0.000029926308,0.000001850585,0.000020472537,0.0008666576,0.000016467771,0.9977499,0.00023397528],"about_ca_topic_score_codex":0.000006076653,"about_ca_topic_score_gemma":0.00007742055,"teacher_disagreement_score":0.99369663,"about_ca_system_score_codex":0.000029935865,"about_ca_system_score_gemma":0.00007546151,"threshold_uncertainty_score":0.78910863},"labels":[],"label_agreement":null},{"id":"W3136324939","doi":"10.1128/ecosalplus.esp-0027-2020","title":"Ancient Antibiotics, Ancient Resistance","year":2021,"lang":"en","type":"review","venue":"EcoSal Plus","topic":"Microbial Natural Products and Biosynthesis","field":"Medicine","cited_by":35,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"Canadian Institutes of Health Research; Natural Sciences and Engineering Research Council of Canada; Government of Canada","keywords":"Antibiotic resistance; Antibiotics; Resistance (ecology); Biology; Ancient DNA; Natural selection; Evolutionary biology; Drug resistance; Biotechnology; Genetics; Ecology; Computational biology; Selection (genetic algorithm); Medicine; Computer science; Artificial intelligence","score_opus":0.04273000007618901,"score_gpt":0.31532481491368036,"score_spread":0.2725948148374914,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3136324939","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000040757182,0.9937387,0.0000036434647,0.0004233366,0.0015092777,0.0008000328,0.00015188952,0.000072025265,0.0032603259],"genre_scores_gemma":[0.00007129956,0.9789857,0.00091729977,0.0005700365,0.0010892669,4.3994598e-7,0.00033739847,0.000063509025,0.017965032],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9975535,0.00009289995,0.0006445954,0.0008606966,0.0003415272,0.0005067641],"domain_scores_gemma":[0.99841183,0.00007647219,0.00028127446,0.0008160002,0.00018658883,0.00022780037],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00037283322,0.00046049038,0.0021961303,0.00015477181,0.00010259134,0.000062813546,0.00021949694,0.00037877963,0.0005606768],"category_scores_gemma":[0.0004823088,0.0003179184,0.00068244943,0.00057305483,0.00008257534,0.00003919487,0.00015935715,0.0006115383,0.00049306924],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000025775533,0.00017070002,7.945447e-7,0.03117123,0.00027139118,0.0007074242,0.00002644078,1.26868e-7,0.00015834083,0.0002657491,0.41473833,0.5524637],"study_design_scores_gemma":[0.00018372558,0.000035422312,0.000006206575,0.021113368,0.00079907634,0.00015536287,0.000006052899,9.459329e-7,0.0003587123,0.0000016430282,0.9769891,0.00035037758],"about_ca_topic_score_codex":0.0000070088477,"about_ca_topic_score_gemma":0.00003496753,"teacher_disagreement_score":0.5622508,"about_ca_system_score_codex":0.0004791451,"about_ca_system_score_gemma":0.0010486749,"threshold_uncertainty_score":0.9999273},"labels":[],"label_agreement":null},{"id":"W3164528360","doi":"10.1128/ecosalplus.esp-0011-2020","title":"Dynamics of Proteins and Macromolecular Machines in Escherichia coli","year":2021,"lang":"en","type":"article","venue":"EcoSal Plus","topic":"Bacterial Genetics and Biotechnology","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"Canadian Institutes of Health Research; Natural Sciences and Engineering Research Council of Canada; Canada Research Chairs; Government of Canada","keywords":"Macromolecule; Macromolecular Substances; Function (biology); Intracellular; Macromolecular crowding; Molecular machine; Protein function","score_opus":0.0044053331454983885,"score_gpt":0.21271733602520085,"score_spread":0.20831200287970247,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3164528360","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9977845,0.0007665486,0.0002954208,0.00053620286,0.00008489179,0.0001125972,0.000034167235,0.0000050907047,0.00038058564],"genre_scores_gemma":[0.9964712,0.0002557349,0.0028443884,0.000082712824,0.000040851464,0.000008099245,0.00011079554,0.000012799029,0.00017336801],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99939907,0.000031832216,0.00015609879,0.0002276028,0.00004379194,0.0001415829],"domain_scores_gemma":[0.999682,0.0000027780973,0.000046129295,0.00019766916,0.00003937478,0.000032025957],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00006214754,0.00009433315,0.00014448017,0.000026999987,0.000016582673,0.000010318911,0.00008462803,0.000197958,0.000016981612],"category_scores_gemma":[0.000045170134,0.00009524074,0.000032003165,0.00009733312,0.00006704673,0.0000010900717,0.00017902967,0.000077724675,0.0000012503501],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00003815872,0.00003954191,0.0012694029,0.000024387065,0.000017048162,0.000020946325,0.000010263072,0.000012011171,0.9962901,0.00057102053,0.000025707777,0.0016814123],"study_design_scores_gemma":[0.0006794681,0.00020242028,0.008322012,0.0000136244225,0.000008415779,0.00002700144,0.000028695344,0.0012368605,0.98638195,0.000627247,0.0023142563,0.00015808009],"about_ca_topic_score_codex":0.000046076097,"about_ca_topic_score_gemma":0.0012001276,"teacher_disagreement_score":0.009908181,"about_ca_system_score_codex":0.0000104164865,"about_ca_system_score_gemma":0.00008507502,"threshold_uncertainty_score":0.38838047},"labels":[],"label_agreement":null},{"id":"W3217324411","doi":"10.1128/ecosalplus.esp-0033-2020","title":"Capsules and Extracellular Polysaccharides in Escherichia coli and Salmonella","year":2021,"lang":"en","type":"article","venue":"EcoSal Plus","topic":"Bacteriophages and microbial interactions","field":"Environmental Science","cited_by":59,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"Canadian Institutes of Health Research; Government of Canada","keywords":"Virulence; Polysaccharide; Salmonella; Microbiology; Escherichia coli; Biofilm; Biology; Serotype; Cell wall; Bacteria; Enterobacteriaceae; Cellulose; Gene; Biochemistry; Genetics","score_opus":0.008514520776822096,"score_gpt":0.2144515197817291,"score_spread":0.205936999004907,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3217324411","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99682444,0.0008756527,0.000034583485,0.00033830394,0.00010047919,0.000053828953,0.000006707371,0.0000113482465,0.0017546398],"genre_scores_gemma":[0.99672633,0.00023045251,0.0008200641,0.00012882707,0.000020260391,0.000002365237,0.0000034778084,0.0000076734395,0.0020605742],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99949217,0.00002209213,0.00010634098,0.0002018509,0.00003874688,0.00013879107],"domain_scores_gemma":[0.9998078,0.000021300013,0.000023136026,0.00008309733,0.000002497115,0.00006217636],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.000054900094,0.00007504749,0.00009508702,0.000013177855,0.000057242938,0.00005283429,0.00003704463,0.000041220435,0.0015195098],"category_scores_gemma":[0.000014559041,0.00007606051,0.000015105525,0.00007898277,0.00006551979,0.0001410573,0.00012703017,0.000098400604,0.000091636975],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000006023539,0.000024863497,0.002518482,0.000004441348,0.0000033774438,0.000064113505,0.00029015244,0.000025224748,0.99491376,0.000047255297,0.00036379287,0.0017385113],"study_design_scores_gemma":[0.00075776747,0.00004541746,0.80174595,0.000039474326,0.000020198166,0.00017848094,0.0006641166,0.0020281784,0.16353485,0.00042768987,0.030184604,0.00037330412],"about_ca_topic_score_codex":0.0010539745,"about_ca_topic_score_gemma":0.0025533454,"teacher_disagreement_score":0.83137894,"about_ca_system_score_codex":0.000047689722,"about_ca_system_score_gemma":0.000009125536,"threshold_uncertainty_score":0.9993932},"labels":[],"label_agreement":null},{"id":"W4211034690","doi":"10.1128/ecosalplus.5.4.5","title":"Osmotic Stress","year":2009,"lang":"en","type":"article","venue":"EcoSal Plus","topic":"Photoreceptor and optogenetics research","field":"Neuroscience","cited_by":66,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"","keywords":"Osmoprotectant; Osmotic pressure; Osmotic shock; Osmoregulation; Ectoine; Trehalose; Turgor pressure; Biology; Mechanosensitive channels; Biophysics; Osmotic concentration; Peptidoglycan; Biochemistry; Osmosis; Efflux; Cell biology; Cell wall; Membrane; Ion channel; Amino acid; Proline; Gene; Ecology; Salinity","score_opus":0.04646267830629366,"score_gpt":0.3204900504959083,"score_spread":0.27402737218961465,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4211034690","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9439527,0.000043636173,0.00007943882,0.00035353558,0.00027633688,0.0001326978,0.000019000381,0.00007425993,0.05506839],"genre_scores_gemma":[0.99782777,0.00003456399,0.0000684704,0.00057113386,0.000112720205,0.0000027703722,0.0000018878434,0.000007427264,0.0013732496],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9990349,0.00004599725,0.00009413642,0.00023722694,0.0002795037,0.0003082391],"domain_scores_gemma":[0.9995643,0.00007308104,0.000017054545,0.00020326844,0.000014958703,0.0001273515],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00006598969,0.0000779003,0.00008370222,0.000058574966,0.000088763576,0.00006111301,0.00029609093,0.000036998867,0.00048254093],"category_scores_gemma":[0.0002055382,0.00007016186,0.00003843034,0.00017373713,0.000040231225,0.00006775902,0.000040444458,0.0001373973,0.00077842484],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000067928115,0.00017565828,0.0005218455,0.000010421667,0.0000022127256,0.0001050034,0.00029691405,0.0003669443,0.97094303,0.0037901467,0.0067633535,0.016956525],"study_design_scores_gemma":[0.00032439083,0.00014406539,0.0055507366,0.0000064645806,0.0000016217742,0.000008601437,0.000009202109,0.0029315075,0.98390543,0.0020570783,0.0049385317,0.00012234515],"about_ca_topic_score_codex":0.0000059338668,"about_ca_topic_score_gemma":0.0000063097204,"teacher_disagreement_score":0.05387507,"about_ca_system_score_codex":0.00004596471,"about_ca_system_score_gemma":0.00004972107,"threshold_uncertainty_score":0.9999996},"labels":[],"label_agreement":null},{"id":"W4229376599","doi":"10.1128/ecosalplus.esp-0007-2022","title":"Correction for Sande and Whitfield, “Capsules and Extracellular Polysaccharides in Escherichia coli and Salmonella”","year":2022,"lang":"en","type":"erratum","venue":"EcoSal Plus","topic":"Biomedical Research and Pathophysiology","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"","keywords":"Salmonella; Escherichia coli; Extracellular polysaccharide; Microbiology; Polysaccharide; Chemistry; Biology; Bacteria; Biochemistry; Genetics","score_opus":0.02020928946760777,"score_gpt":0.285573537708199,"score_spread":0.26536424824059124,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4229376599","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8127472,0.14302652,0.0004313276,0.00559714,0.025969453,0.0035104197,0.00037709455,0.000136325,0.008204535],"genre_scores_gemma":[0.51257575,0.086068444,0.0015111384,0.00222943,0.0060106684,0.0006141143,0.0027705329,0.00026746112,0.38795245],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99849916,0.00009208755,0.0002716244,0.0005134761,0.00022321036,0.00040044377],"domain_scores_gemma":[0.99902093,0.00038456797,0.0000853676,0.00016029549,0.00003574711,0.00031309426],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00040038396,0.00023516745,0.000592573,0.00022089308,0.0001258862,0.000032961103,0.000066638524,0.0005193546,0.00032691384],"category_scores_gemma":[0.0006688937,0.00021004831,0.00005142866,0.00014679469,0.00022283259,0.000041468425,0.00015839296,0.001259674,0.000002364614],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.001743777,0.00011425891,0.0006127813,0.0013048716,0.00010500807,0.00024240774,0.00042429566,5.4235204e-7,0.020624274,0.00009227518,0.9480101,0.026725397],"study_design_scores_gemma":[0.008124806,0.0054062135,0.046929184,0.00084830396,0.00027667565,0.00032389222,0.001172987,0.02309085,0.0006548086,0.003403576,0.9088056,0.0009630678],"about_ca_topic_score_codex":0.00041408217,"about_ca_topic_score_gemma":0.0003626963,"teacher_disagreement_score":0.3797479,"about_ca_system_score_codex":0.00007562616,"about_ca_system_score_gemma":0.0003573345,"threshold_uncertainty_score":0.8565521},"labels":[],"label_agreement":null},{"id":"W4377941026","doi":"10.1128/ecosalplus.esp-0018-2022","title":"Characterizing the Pathogenic Potential of Crohn’s Disease-Associated Adherent-Invasive Escherichia coli","year":2023,"lang":"en","type":"review","venue":"EcoSal Plus","topic":"Antibiotic Resistance in Bacteria","field":"Biochemistry, Genetics and Molecular Biology","cited_by":16,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Population Health Research Institute; McMaster University","funders":"Canadian Institutes of Health Research; Crohn's and Colitis Canada; Government of Canada","keywords":"Escherichia coli; Microbiology; Crohn's disease; Pathogenic Escherichia coli; Disease; Medicine; Biology; Pathology; Genetics","score_opus":0.027695843784121116,"score_gpt":0.2837018089510311,"score_spread":0.25600596516691,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4377941026","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.100822695,0.89528245,0.00001855383,0.000027311165,0.0012318895,0.0011764249,0.0012859026,0.000044469543,0.00011027957],"genre_scores_gemma":[0.011090897,0.98401004,0.000029484565,0.000050371702,0.0005694005,0.000071079194,0.0024300246,0.00014728401,0.0016014081],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99761385,0.00032660196,0.0007589042,0.00059765164,0.0002462665,0.00045675758],"domain_scores_gemma":[0.9980364,0.00007287345,0.00090439554,0.00074543676,0.00010481032,0.00013608302],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00028860514,0.0004782148,0.0010653998,0.000054353357,0.00012687869,0.000063340536,0.00070907146,0.0004539592,0.00006317394],"category_scores_gemma":[0.00044654182,0.000356739,0.000834203,0.0002332303,0.00015393506,0.000004704183,0.00039426103,0.00028517973,0.00013739878],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0036035278,0.0024962646,0.0014988207,0.16181049,0.03174648,0.0048961416,0.0007189726,0.00006304231,0.25848985,0.0006361079,0.08164603,0.45239428],"study_design_scores_gemma":[0.00137169,0.0003361918,0.035724524,0.017202254,0.0045299553,0.000029503442,0.00016382043,0.000033211643,0.00084227475,0.0000867971,0.93734705,0.002332724],"about_ca_topic_score_codex":0.000012566602,"about_ca_topic_score_gemma":0.00006758894,"teacher_disagreement_score":0.855701,"about_ca_system_score_codex":0.00009484781,"about_ca_system_score_gemma":0.0010390414,"threshold_uncertainty_score":0.9998885},"labels":[],"label_agreement":null}]}