{"meta":{"query_hash":"9debca0b2965","filters":{"venue":"Emerging infectious diseases"},"cohort_total":404,"direct_labels_cover":1,"predictions_cover":404,"exported":404,"export_cap":100000,"truncated":false,"label_status":"direct model label, unvalidated","prediction_status":"machine_predicted_unvalidated (Codex and Gemma teacher distillation)","score_status":"score_only:v0-immature-baseline","snapshot":{"source":"OpenAlex, pinned release, all 482 partitions","release":"2026-06-24","frame_built":"2026-07-12"},"permalink":"https://metacan.xera.ac/q/9debca0b2965","api":"https://metacan.xera.ac/api/v1/cohort?venue=Emerging+infectious+diseases"},"results":[{"id":"W116688021","doi":"10.3201/eid1007.040090","title":"Psychosocial Impact of SARS","year":2004,"lang":"en","type":"letter","venue":"Emerging infectious diseases","topic":"COVID-19 and Mental Health","field":"Psychology","cited_by":155,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Depression (economics); Psychosocial; Medicine; Anxiety; Feeling; Severe acute respiratory syndrome; Psychiatry; Coronavirus disease 2019 (COVID-19); Psychology; Internal medicine; Disease","score_opus":0.03670613335204586,"score_gpt":0.42324717925760613,"score_spread":0.38654104590556027,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W116688021","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.5524759,0.011891902,0.00037859118,0.29574305,0.036288247,0.0041330126,0.006013426,0.0024075976,0.09066822],"genre_scores_gemma":[0.65538955,0.00020225423,0.0000062857766,0.3303342,0.009857516,0.00018884777,0.00091832434,0.0002156878,0.0028873729],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9977277,0.00017402512,0.00048625926,0.0005659483,0.00034817558,0.00069789484],"domain_scores_gemma":[0.9986469,0.00014849128,0.00040764414,0.0005730376,0.0000694554,0.00015445426],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00007478119,0.0004441072,0.00061064237,0.0003979893,0.00015863302,0.000021863256,0.00024644853,0.00054163113,0.0039480748],"category_scores_gemma":[0.00004355925,0.00043029644,0.00087492104,0.00034530976,0.00014494074,0.0000599906,0.000047790138,0.0009119074,0.00034577193],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000059827038,0.00039115275,0.06284502,0.00043327425,0.0004584253,0.00016878957,0.0005957849,0.00002704109,0.000005025721,0.00008674392,0.93174624,0.0031826617],"study_design_scores_gemma":[0.0028327643,0.0011659103,0.20223977,0.00040333174,0.0005514899,0.000052620755,0.0000527694,0.0000015398547,0.0000045084685,0.003678686,0.7880577,0.00095891726],"about_ca_topic_score_codex":0.015212431,"about_ca_topic_score_gemma":0.000094942785,"teacher_disagreement_score":0.14368856,"about_ca_system_score_codex":0.0012986165,"about_ca_system_score_gemma":0.0011655618,"threshold_uncertainty_score":0.99981487},"labels":[],"label_agreement":null},{"id":"W1520819481","doi":"10.3201/eid1405.071459","title":"Persistent Human Metapneumovirus Infection in Immunocompromised Child","year":2008,"lang":"en","type":"letter","venue":"Emerging infectious diseases","topic":"Respiratory viral infections research","field":"Medicine","cited_by":24,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Centre hospitalier universitaire de Québec","funders":"","keywords":"Human metapneumovirus; Medicine; Pneumonia; Oseltamivir; Zanamivir; Immunosuppression; Hematopoietic stem cell transplantation; Bronchiolitis; Immunology; Lower respiratory tract infection; Respiratory tract infections; Pneumonitis; Pediatrics; Transplantation; Internal medicine; Respiratory system; Lung; Virus; Disease","score_opus":0.03349849719126001,"score_gpt":0.32646958450238833,"score_spread":0.2929710873111283,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1520819481","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.85837114,0.007215524,0.000028179951,0.072613575,0.0021478422,0.005142136,0.00015824463,0.0021173707,0.052206006],"genre_scores_gemma":[0.7351323,0.0032539568,0.00001555445,0.24025139,0.009365146,0.0021635145,0.002283818,0.00066535117,0.0068690144],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99529976,0.0005136152,0.0009712171,0.0011010661,0.0010621365,0.0010522159],"domain_scores_gemma":[0.9978477,0.00011180348,0.00032952568,0.0011455547,0.00029846642,0.00026698582],"candidate_categories":["metaepi_narrow","research_integrity","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0002209203,0.0008165968,0.0012289739,0.0025969185,0.0008352648,0.00013600913,0.00022760841,0.0008452427,0.001187529],"category_scores_gemma":[0.00031698763,0.0008245565,0.0012916349,0.0013387336,0.00033713222,0.00029357453,0.0001760817,0.004230475,0.00041829393],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013943596,0.00171418,0.36816218,0.0016130272,0.0016872771,0.0040971832,0.00018359537,0.0005317569,0.0011246018,0.000017493305,0.61863697,0.0020922855],"study_design_scores_gemma":[0.0038902948,0.0011916806,0.15732385,0.0007379297,0.00079022255,0.0010756727,0.00001207321,0.00010624047,0.0002227713,0.000047836405,0.83352727,0.0010741511],"about_ca_topic_score_codex":0.0029567915,"about_ca_topic_score_gemma":0.00014166223,"teacher_disagreement_score":0.2148903,"about_ca_system_score_codex":0.0013864993,"about_ca_system_score_gemma":0.00037080143,"threshold_uncertainty_score":0.9997255},"labels":[],"label_agreement":null},{"id":"W154717418","doi":"10.3201/eid1809.120008","title":"<i>Salmonella</i>Serovar Agbeni, British Columbia, Canada, 2011","year":2012,"lang":"en","type":"letter","venue":"Emerging infectious diseases","topic":"Salmonella and Campylobacter epidemiology","field":"Agricultural and Biological Sciences","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Serotype; Salmonella enterica; Salmonella; Outbreak; Population; Health protection; Salmonella infection; Incubation period; Veterinary medicine; Virology; Biology; Geography; Medicine; Environmental health; Incubation; Bacteria","score_opus":0.009960533657667475,"score_gpt":0.19077659150763934,"score_spread":0.18081605784997187,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W154717418","genre_codex":"empirical","genre_gemma":"commentary","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8814456,0.009262024,0.000001468433,0.09521757,0.0055205976,0.00064920174,0.002378445,0.00074335875,0.0047817733],"genre_scores_gemma":[0.4046748,0.00070053065,0.000004963901,0.5533436,0.020535069,0.00018251217,0.004668412,0.00002428416,0.015865816],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99625653,0.00040061158,0.00060147693,0.00088590756,0.00049887074,0.0013565912],"domain_scores_gemma":[0.99822915,0.00061947276,0.00040806664,0.00022913772,0.00014545195,0.0003687291],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00016275194,0.00047331996,0.00083499955,0.000017862878,0.0006187922,0.00032475882,0.00056529854,0.0007311559,0.011482145],"category_scores_gemma":[0.0001335663,0.00034764272,0.00041964254,0.00024556956,0.00012897623,0.0001482846,0.00018801253,0.0010684857,0.00023992153],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000018215014,0.0000486355,0.31427574,0.000033371416,0.00007743167,0.00020575903,0.0000033941126,0.0000013560757,0.0000476969,3.593918e-7,0.67874676,0.0065576704],"study_design_scores_gemma":[0.000089689085,0.000055043263,0.30585125,0.00004113526,0.00014730885,0.000119004275,0.000011571578,0.0000015316282,0.0000020545556,0.00015559448,0.69292206,0.0006037353],"about_ca_topic_score_codex":0.9748828,"about_ca_topic_score_gemma":0.9779159,"teacher_disagreement_score":0.47677076,"about_ca_system_score_codex":0.00023625093,"about_ca_system_score_gemma":0.00014915569,"threshold_uncertainty_score":0.99989754},"labels":[],"label_agreement":null},{"id":"W15503412","doi":"10.3201/eid1009.040117","title":"Command and Control for Homeland Security","year":2007,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"COVID-19 epidemiological studies","field":"Mathematics","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Homeland security; Sociotechnical system; Command and control; Computer security; Hierarchy; Information exchange; Information sharing; Somali; Homeland; Computer science; Operations research; Political science; Engineering; Telecommunications; Terrorism; Knowledge management; Law; World Wide Web","score_opus":0.06163412254025876,"score_gpt":0.3903772384703492,"score_spread":0.3287431159300905,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W15503412","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.910897,0.0018312933,0.08399854,0.0007532338,0.00021865338,0.00069762627,0.00008721923,0.0004057257,0.0011106654],"genre_scores_gemma":[0.9987657,0.00006964162,0.0001836536,0.00066371815,0.00020379842,0.00005745027,0.0000036763367,0.000015269101,0.000037083526],"study_design_codex":"observational","study_design_gemma":"theoretical_or_conceptual","domain_scores_codex":[0.9990473,0.000054946846,0.00025768953,0.00023113277,0.00009527028,0.00031370172],"domain_scores_gemma":[0.994092,0.005465197,0.00010186362,0.00014504585,0.00006454934,0.00013135569],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005925961,0.00015460126,0.00034882044,0.000055557495,0.0003125935,0.000021964315,0.000056853933,0.000053219374,0.000031762745],"category_scores_gemma":[0.0046859537,0.00012320654,0.0001063846,0.00008254037,0.00010310498,0.000050496015,0.000054981414,0.00007890622,0.0000027998533],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010668723,0.00022629474,0.9723936,0.00031636297,0.00016373418,0.000006754711,0.000282715,0.000009809392,0.000025555199,0.01481954,0.009611117,0.0020378765],"study_design_scores_gemma":[0.0034237516,0.00028069917,0.29276395,0.000051826843,0.00034275264,0.0000071915047,0.00014182017,0.0004543717,0.00004337497,0.6739111,0.028165484,0.00041366194],"about_ca_topic_score_codex":0.00006527703,"about_ca_topic_score_gemma":0.00021362689,"teacher_disagreement_score":0.6796296,"about_ca_system_score_codex":0.000047923237,"about_ca_system_score_gemma":0.000010206109,"threshold_uncertainty_score":0.5609863},"labels":[],"label_agreement":null},{"id":"W15829203","doi":"10.3201/eid1104.041070","title":"Atmospheric food freeze-drying: challenges and opportunities","year":2013,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Freezing and Crystallization Processes","field":"Engineering","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Environmental science; Food science; Chemistry","score_opus":0.017340799632071507,"score_gpt":0.1932065508417668,"score_spread":0.1758657512096953,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W15829203","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8487362,0.11350894,0.0026988017,0.00038810394,0.0005630063,0.0002446261,0.000014960092,0.0032831393,0.030562181],"genre_scores_gemma":[0.9854082,0.013995634,0.000047102305,0.000081263104,0.00010771214,0.000104543076,0.000008660855,0.000047991434,0.00019890288],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9993331,0.000016703663,0.00015019534,0.00016115683,0.0001138399,0.00022503044],"domain_scores_gemma":[0.9995696,0.000044822267,0.0000274172,0.00014695393,0.00006332045,0.00014790188],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00002489591,0.00017641147,0.00014649364,0.00003199482,0.00012006339,0.00008856489,0.00006989456,0.00004467694,0.0002576166],"category_scores_gemma":[0.000037639424,0.00018048788,0.000037262453,0.000080651,0.000052577616,0.0004314852,0.000028880573,0.000066200366,0.000024492234],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00000867269,0.0004478397,0.03366705,0.0051488495,0.0010754489,0.000029908946,0.005857168,0.05773344,0.0012862113,0.04088593,0.030173132,0.82368636],"study_design_scores_gemma":[0.005699177,0.0018931361,0.16753551,0.001566857,0.00097192277,0.00027295036,0.018195588,0.16083983,0.0022727186,0.11383103,0.5190314,0.007889892],"about_ca_topic_score_codex":0.000020479056,"about_ca_topic_score_gemma":0.00001901903,"teacher_disagreement_score":0.81579643,"about_ca_system_score_codex":0.000021578418,"about_ca_system_score_gemma":0.000015067897,"threshold_uncertainty_score":0.7360082},"labels":[],"label_agreement":null},{"id":"W1727307202","doi":"10.3201/eid1709.101916","title":"Pandemic (H1N1) 2009 Virus in Swine Herds, China","year":2011,"lang":"en","type":"letter","venue":"Emerging infectious diseases","topic":"Influenza Virus Research Studies","field":"Medicine","cited_by":18,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"National Key Research and Development Program of China; National Natural Science Foundation of China","keywords":"Pandemic; GenBank; Virus; Virology; China; Biology; Reassortment; Veterinary medicine; Transmission (telecommunications); Influenza A virus; Geography; Medicine; Coronavirus disease 2019 (COVID-19); Genetics; Gene; Disease","score_opus":0.04108744860631377,"score_gpt":0.33737621476992313,"score_spread":0.2962887661636094,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1727307202","genre_codex":"empirical","genre_gemma":"commentary","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"commentary","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.47431496,0.12608838,0.00011561835,0.2405308,0.0067341933,0.00957795,0.002649368,0.006247443,0.13374127],"genre_scores_gemma":[0.16193195,0.019686297,0.00008531217,0.7661121,0.02363031,0.0017166686,0.0018480024,0.0009606386,0.024028761],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9959206,0.00024325402,0.00072603836,0.000898677,0.0009121875,0.0012992388],"domain_scores_gemma":[0.9982239,0.00017756571,0.00024956185,0.0008890409,0.0002004322,0.00025950297],"candidate_categories":["metaepi_narrow","research_integrity","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00024615595,0.00078267796,0.001240071,0.0011493759,0.000248674,0.000052190066,0.00029450527,0.00064167427,0.001599791],"category_scores_gemma":[0.00092960586,0.00070198555,0.00047087012,0.00068803516,0.00028977383,0.00017247895,0.00028325873,0.0030865856,0.0006262367],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014104723,0.0003077535,0.22776216,0.0008273398,0.00044985398,0.0018548103,0.00023285957,0.000013394177,0.00008903295,0.0000047698686,0.7657764,0.0025405537],"study_design_scores_gemma":[0.002462867,0.00038998452,0.21668534,0.0008883538,0.00048565163,0.00010516681,0.000018392358,0.000024386498,0.000059059057,0.00044679304,0.77762973,0.0008042658],"about_ca_topic_score_codex":0.0042348937,"about_ca_topic_score_gemma":0.0003069139,"teacher_disagreement_score":0.52558124,"about_ca_system_score_codex":0.0005798004,"about_ca_system_score_gemma":0.00044589667,"threshold_uncertainty_score":0.99954313},"labels":[],"label_agreement":null},{"id":"W1759671140","doi":"10.3201/eid2110.141640","title":"Epidemiology of Lyme Disease, Nova Scotia, Canada, 2002–2013","year":2015,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Vector-borne infectious diseases","field":"Immunology and Microbiology","cited_by":32,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Government of Nunavut; Nova Scotia Department of Health and Wellness; Public Health Agency of Canada; Nova Scotia Health Authority; Dalhousie University","funders":"Department of Health, Western Cape Government; Dalhousie University; Nova Scotia Department of Health and Wellness","keywords":"Epidemiology; Lyme disease; Seroprevalence; Borrelia burgdorferi; Nova scotia; Ixodes scapularis; Incidence (geometry); Medicine; Tick-borne disease; Tick; Population; Ixodes; Virology; Dermatology; Immunology; Serology; Internal medicine; Antibody; Geography; Environmental health","score_opus":0.02105078273541634,"score_gpt":0.2651334893225297,"score_spread":0.2440827065871134,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1759671140","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9304734,0.0569791,0.00032989576,0.00087104493,0.005922888,0.0006018012,0.0008722324,0.0005695673,0.0033800697],"genre_scores_gemma":[0.99725866,0.00007753538,0.000012121928,0.00083667226,0.00020085592,0.00004138511,0.00028850872,0.000064793,0.0012194556],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9967561,0.0006992471,0.0008285098,0.00066977117,0.00014029628,0.0009060904],"domain_scores_gemma":[0.99720335,0.00066733226,0.00047064162,0.00077351154,0.00042285633,0.0004623171],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00031868837,0.0004765701,0.000843198,0.00029437902,0.00018312896,0.0000066250827,0.00037475428,0.00018249886,0.002838761],"category_scores_gemma":[0.0029168664,0.00046975326,0.00030394798,0.00046833715,0.0004963363,0.00019691374,0.00018773631,0.00028049262,0.00081393565],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013785323,0.0004606426,0.81700134,0.00006863852,0.00044269816,0.000025673453,0.000045054003,0.0017245626,0.00014785043,0.0008798414,0.17864518,0.00042068277],"study_design_scores_gemma":[0.002671394,0.0003079789,0.96110535,0.00010841888,0.0006460534,0.0000817826,0.00014747167,0.000053694563,0.0004383511,0.0013022332,0.032326058,0.0008112164],"about_ca_topic_score_codex":0.58696014,"about_ca_topic_score_gemma":0.41665232,"teacher_disagreement_score":0.1703078,"about_ca_system_score_codex":0.00037729065,"about_ca_system_score_gemma":0.0021035047,"threshold_uncertainty_score":0.99996406},"labels":[],"label_agreement":null},{"id":"W1963868317","doi":"10.3201/eid1702.101020","title":"Risk Factors for<i>Cryptococcus gattii</i>Infection, British Columbia, Canada","year":2011,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Fungal Infections and Studies","field":"Medicine","cited_by":127,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Public Health Agency of Canada; University of British Columbia; Island Health; BC Centre for Disease Control","funders":"British Columbia Centre for Disease Control","keywords":"Odds ratio; Confidence interval; Medicine; Cryptococcus gattii; Case-control study; Population; Pneumonia; Internal medicine; Cryptococcosis; Demography; Immunology; Environmental health","score_opus":0.013187175811563511,"score_gpt":0.23143670211024792,"score_spread":0.2182495262986844,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1963868317","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98974454,0.00048618586,0.0005317107,0.000023626664,0.0016817306,0.00082252,0.0003619716,0.00043467255,0.0059130583],"genre_scores_gemma":[0.9970465,0.00032167198,0.000060193615,0.0002170848,0.00031456782,0.0003217478,0.00006237669,0.000054335458,0.0016015451],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9985074,0.000047110978,0.00034435836,0.00041582235,0.00022317228,0.00046215192],"domain_scores_gemma":[0.99874884,0.000152462,0.00015393943,0.00028681124,0.00034379627,0.00031412995],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.000077372446,0.00021299746,0.00041076908,0.00008019669,0.0010677915,0.00010230535,0.000053118038,0.000073849245,0.0010368491],"category_scores_gemma":[0.00064889295,0.00028482583,0.00028776072,0.00035033282,0.00009836706,0.0001274494,0.000042521286,0.0001941373,0.000009377254],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000169665,0.00032731052,0.93393475,0.000095525575,0.00035506312,0.000021095519,0.00012897878,0.000018109064,0.000008593049,0.000018277784,0.06325862,0.0018166823],"study_design_scores_gemma":[0.001016609,0.0003728432,0.96228915,0.00006897088,0.0005809085,0.000049386217,0.00014666101,0.000041049607,0.000058971422,0.0004026133,0.034651477,0.00032134156],"about_ca_topic_score_codex":0.9778475,"about_ca_topic_score_gemma":0.9741856,"teacher_disagreement_score":0.028607143,"about_ca_system_score_codex":0.00028699246,"about_ca_system_score_gemma":0.00040561106,"threshold_uncertainty_score":0.99996036},"labels":[],"label_agreement":null},{"id":"W1964451109","doi":"10.3201/eid1105.040512","title":"Media Effects on Students during SARS Outbreak","year":2005,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Communication in Education and Healthcare","field":"Psychology","cited_by":76,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Brock University","funders":"Centers for Disease Control and Prevention; Brock University","keywords":"Outbreak; Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2); Coronavirus disease 2019 (COVID-19); Medicine; Sars virus; Severe acute respiratory syndrome; Anxiety; 2019-20 coronavirus outbreak; Family medicine; Virology; Psychiatry; Internal medicine; Disease; Infectious disease (medical specialty)","score_opus":0.018160573537073867,"score_gpt":0.3881498514247756,"score_spread":0.36998927788770175,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1964451109","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9749288,0.000833696,0.00000972339,0.0023919481,0.0020949447,0.00026915263,0.00001215159,0.00045060972,0.01900896],"genre_scores_gemma":[0.9955382,0.00009543552,0.000019877543,0.0016750885,0.00088736136,0.0002183234,0.000029212244,0.000034636552,0.0015019034],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9986601,0.00022370965,0.0002564963,0.0002872677,0.00026634298,0.00030606615],"domain_scores_gemma":[0.9986072,0.0003348612,0.00010633799,0.0006797377,0.00006340897,0.00020841972],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.0000915282,0.00016521363,0.00017046985,0.00022508873,0.00034931002,0.000045059423,0.00029792872,0.00006367858,0.001802713],"category_scores_gemma":[0.00017092115,0.00017419671,0.00009963486,0.00022314322,0.00003667683,0.00007559136,0.00007617038,0.00021087874,0.0017833804],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00004968948,0.0012100906,0.93170017,0.00006747221,0.00010324234,0.0000061586748,0.007217379,0.000058167567,0.000036231144,0.0033773903,0.013932687,0.042241294],"study_design_scores_gemma":[0.0009456046,0.00004741134,0.9687213,0.00006115041,0.000033280383,0.000006511062,0.0004361322,0.000003925398,0.00006662336,0.00013692782,0.0293605,0.0001806577],"about_ca_topic_score_codex":0.00012921797,"about_ca_topic_score_gemma":0.00012449131,"teacher_disagreement_score":0.042060636,"about_ca_system_score_codex":0.00018027822,"about_ca_system_score_gemma":0.000036919337,"threshold_uncertainty_score":0.99910975},"labels":[],"label_agreement":null},{"id":"W1964653908","doi":"10.3201/eid1007.030633","title":"Human Metapneumovirus and Chronic Obstructive Pulmonary Disease","year":2004,"lang":"en","type":"letter","venue":"Emerging infectious diseases","topic":"Respiratory viral infections research","field":"Medicine","cited_by":52,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Human metapneumovirus; Sputum; Medicine; Exacerbation; Metapneumovirus; Etiology; Sputum culture; Virology; Virus; Immunology; Respiratory system; Internal medicine; Respiratory tract infections; Pathology; Tuberculosis","score_opus":0.02352107427867378,"score_gpt":0.3263915276068346,"score_spread":0.3028704533281608,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1964653908","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.6241425,0.059416376,0.00014015846,0.27058148,0.003435045,0.008185279,0.0014483014,0.0045123654,0.02813846],"genre_scores_gemma":[0.8129764,0.0004810868,0.000013638078,0.16490237,0.011867955,0.000990936,0.0010654234,0.00047144972,0.0072307237],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9961772,0.00025450147,0.0005673937,0.0011824878,0.00090691244,0.0009115251],"domain_scores_gemma":[0.9977122,0.00010252344,0.00024106764,0.0010148679,0.00026040094,0.0006689536],"candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.000109044595,0.00077299046,0.0008880336,0.0010785832,0.00074497785,0.00018346036,0.00019748077,0.00048786952,0.0009027189],"category_scores_gemma":[0.00029631818,0.0007452725,0.000503701,0.0006095634,0.00063525,0.00031840775,0.00025170943,0.0024480156,0.00019890342],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002606503,0.0018328346,0.31821874,0.014054452,0.0035209702,0.038172495,0.0001333548,0.0005943541,0.0034467161,0.00077348994,0.6010586,0.017933318],"study_design_scores_gemma":[0.0021153658,0.00083684945,0.31436074,0.0009685015,0.0030864282,0.0006426744,0.000018818339,0.00007292529,0.00014643722,0.0045590987,0.67159826,0.0015939256],"about_ca_topic_score_codex":0.00031184743,"about_ca_topic_score_gemma":0.000017656794,"teacher_disagreement_score":0.18883388,"about_ca_system_score_codex":0.0014483378,"about_ca_system_score_gemma":0.00107723,"threshold_uncertainty_score":0.9998534},"labels":[],"label_agreement":null},{"id":"W1964981192","doi":"10.3201/eid2104.141707","title":"Zika Virus Infection, Philippines, 2012","year":2015,"lang":"en","type":"letter","venue":"Emerging infectious diseases","topic":"Mosquito-borne diseases and control","field":"Medicine","cited_by":123,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Canadian Institutes of Health Research; U.S. Department of Defense","keywords":"Zika virus; Outbreak; Flavivirus; Virology; Medicine; Flaviviridae; Serology; Yellow fever; Virus; Viral disease; Immunology","score_opus":0.013567942212216487,"score_gpt":0.2726814883756866,"score_spread":0.25911354616347015,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1964981192","genre_codex":"commentary","genre_gemma":"commentary","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"commentary","genre_consensus":"commentary","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.037802063,0.114947155,0.0011455035,0.7484118,0.020932086,0.0071548102,0.0034440935,0.008604234,0.057558287],"genre_scores_gemma":[0.047767196,0.002791197,0.000014385228,0.8595235,0.051490415,0.0010278075,0.0062516914,0.00060573453,0.030528085],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99595666,0.00019012901,0.0007208707,0.0010567389,0.0010769718,0.0009986458],"domain_scores_gemma":[0.9967885,0.00010833142,0.00040998895,0.0012616504,0.0007384883,0.000693045],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00015432238,0.00091935456,0.0012775165,0.0006308613,0.00030575696,0.0001555172,0.00021851221,0.0007587514,0.003933918],"category_scores_gemma":[0.00048704562,0.0008606015,0.00097467337,0.00057495985,0.0001644526,0.00031637825,0.00014318328,0.0015452374,0.0009623146],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000104214145,0.00060884695,0.029108094,0.0007525071,0.00076649914,0.0007996499,0.000031044216,0.000043043998,0.00001665708,0.000020350679,0.9625895,0.0051595783],"study_design_scores_gemma":[0.0024562874,0.00045852788,0.010980153,0.00033728254,0.0032115676,0.00019977933,0.0000067334936,0.00010107264,0.0000057194206,0.00050782255,0.9808755,0.0008595721],"about_ca_topic_score_codex":0.001267672,"about_ca_topic_score_gemma":0.00011082636,"teacher_disagreement_score":0.11215596,"about_ca_system_score_codex":0.00045406874,"about_ca_system_score_gemma":0.0009148215,"threshold_uncertainty_score":0.9998155},"labels":[],"label_agreement":null},{"id":"W1965685858","doi":"10.3201/eid1904.111812","title":"Risk Factors for Influenza among Health Care Workers during 2009 Pandemic, Toronto, Ontario, Canada","year":2013,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Influenza Virus Research Studies","field":"Medicine","cited_by":40,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"McMaster University; Sunnybrook Health Science Centre; North York General Hospital; Université Laval; University of Toronto; Dalhousie University; Public Health Ontario; Health Sciences Centre; Mount Sinai Hospital","funders":"Sanofi Pasteur; Schweizerischer Nationalfonds zur Förderung der Wissenschaftlichen Forschung; Public Health Agency of Canada; Institute for Clinical Evaluative Sciences; McMaster University; GlaxoSmithKline; Public Health Agency; Sanofi; F. Hoffmann-La Roche; Dalhousie University; Canadian Institutes of Health Research; National Science Foundation","keywords":"Medicine; Hygiene; Pandemic; Odds ratio; Infection control; Health care; Influenza A virus; Respiratory infection; Internal medicine; Immunology; Intensive care medicine; Respiratory system; Coronavirus disease 2019 (COVID-19); Virus; Disease; Infectious disease (medical specialty)","score_opus":0.023395584951574292,"score_gpt":0.3194104622423397,"score_spread":0.2960148772907654,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1965685858","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9881465,0.008229851,0.000015338619,0.00006480482,0.0003828901,0.0017987618,0.00020883499,0.00029538767,0.00085765007],"genre_scores_gemma":[0.9976196,0.00021995693,0.00003657217,0.00061312044,0.00024053236,0.0004989933,0.00006529259,0.00006273786,0.00064314494],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99745625,0.00008104649,0.00047218805,0.00046880794,0.00053349487,0.000988238],"domain_scores_gemma":[0.99806255,0.00022008685,0.0002301306,0.00040351253,0.00039788065,0.00068582763],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00008974119,0.00037355997,0.0005619587,0.00010709193,0.0009690133,0.000075203134,0.00012367593,0.00007676877,0.0008816258],"category_scores_gemma":[0.00071076443,0.00032727793,0.00022336016,0.00014937078,0.00010622911,0.00034228238,0.000099074576,0.0003219347,0.000009735689],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":true,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008221572,0.000060866318,0.9739907,0.00030585527,0.00038833395,0.000004662569,0.002787354,0.00040780785,0.000010531667,0.0000020039527,0.02044772,0.0015119491],"study_design_scores_gemma":[0.0018171718,0.0002069657,0.97780687,0.00014926071,0.0001347567,0.000002201346,0.0045393566,0.000024762006,0.000032781274,0.0000103860775,0.014966415,0.0003090678],"about_ca_topic_score_codex":0.9967428,"about_ca_topic_score_gemma":0.99419814,"teacher_disagreement_score":0.009473168,"about_ca_system_score_codex":0.0057924725,"about_ca_system_score_gemma":0.0023029523,"threshold_uncertainty_score":0.9999179},"labels":[],"label_agreement":null},{"id":"W1968396297","doi":"10.3201/eid1811.111505","title":"<i>Legionella pneumophila</i>Serotype 1 Pneumonia in Patient Receiving Adalimumab","year":2012,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Legionella and Acanthamoeba research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":10,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba","funders":"","keywords":"Legionella pneumophila; Medicine; Pneumonia; Serotype; Adalimumab; Rheumatoid arthritis; Legionnaires' disease; Tumor necrosis factor alpha; Immunology; Legionella; Microbiology; Internal medicine; Biology; Bacteria","score_opus":0.008417046580271785,"score_gpt":0.2557946081238712,"score_spread":0.24737756154359944,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1968396297","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9934894,0.0025281885,0.000035459303,0.00020061068,0.00048953894,0.00021757756,0.000012032737,0.000052881627,0.0029743167],"genre_scores_gemma":[0.99824876,0.0005040713,0.000013974558,0.00033165555,0.0005418398,0.00006713775,0.0000648751,0.000042316922,0.00018540103],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9984616,0.0001121454,0.00024251656,0.00033371683,0.00022883694,0.00062119163],"domain_scores_gemma":[0.99924874,0.000024252353,0.00007393666,0.00034273637,0.00006243469,0.00024792252],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001330232,0.0002074828,0.00016706681,0.00013480512,0.00016047197,0.000034779925,0.00014440283,0.00010296722,0.000027957094],"category_scores_gemma":[0.00014317561,0.00020479526,0.0001171004,0.00026631117,0.000065876695,0.000019311612,0.00017239,0.00015103964,0.000060076894],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000075901415,0.0005372404,0.90331864,0.000046216708,0.000049473645,0.000019406009,0.0002525673,0.0004431737,0.08734878,0.00007881805,0.0038015898,0.0040282067],"study_design_scores_gemma":[0.003294238,0.0011472895,0.7283026,0.00025105805,0.000112266185,0.00023798147,0.0006940162,0.0002941461,0.0626174,0.0004959611,0.20050113,0.002051929],"about_ca_topic_score_codex":0.00015398517,"about_ca_topic_score_gemma":0.00006582522,"teacher_disagreement_score":0.19669953,"about_ca_system_score_codex":0.000054832355,"about_ca_system_score_gemma":0.00007578788,"threshold_uncertainty_score":0.8351309},"labels":[],"label_agreement":null},{"id":"W1969301715","doi":"10.3201/eid1209.060397","title":"Fluoroquinolones and Risk for Methicillin-Resistant<i>Staphylococcus aureus</i>, Canada","year":2006,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Clostridium difficile and Clostridium perfringens research","field":"Medicine","cited_by":70,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Université de Sherbrooke","funders":"","keywords":"Medicine; Methicillin-resistant Staphylococcus aureus; Antimicrobial; Clostridium difficile; Staphylococcus aureus; Internal medicine; Retrospective cohort study; Colonization; Hazard ratio; Confidence interval; Risk factor; Microbiology; Intensive care medicine; Antibiotics; Biology; Bacteria","score_opus":0.010373699242383762,"score_gpt":0.2648951654925935,"score_spread":0.25452146625020977,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1969301715","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98952305,0.0068231164,0.00015051315,0.00085005147,0.00024385314,0.0007092891,0.0005553684,0.00018866142,0.0009561092],"genre_scores_gemma":[0.9973921,0.0007309363,0.00006615652,0.00016550397,0.0006766285,0.00015033173,0.00013717536,0.000052119947,0.0006290413],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9980846,0.000067063345,0.00035046742,0.00047155668,0.00044963762,0.00057666114],"domain_scores_gemma":[0.9986008,0.00038526987,0.00011443892,0.00034301192,0.00027096053,0.00028551513],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00014966594,0.00027886772,0.0004077345,0.00017667019,0.0004777752,0.000056554753,0.000085147796,0.00009603615,0.00008252703],"category_scores_gemma":[0.0004903684,0.00025763034,0.00016718243,0.00030895576,0.00012713774,0.00005609012,0.00006086064,0.00025251994,0.0000045540514],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0013041208,0.0010273879,0.7481641,0.0013098697,0.00086326024,0.00023548774,0.00010563899,0.0008198247,0.10451788,0.0013512992,0.12404072,0.016260374],"study_design_scores_gemma":[0.011942238,0.0020091578,0.49953762,0.00038962936,0.0030557632,0.000035726753,0.00059059873,0.0025880241,0.124378055,0.0022368957,0.35137567,0.0018606316],"about_ca_topic_score_codex":0.41022578,"about_ca_topic_score_gemma":0.26534033,"teacher_disagreement_score":0.24862652,"about_ca_system_score_codex":0.0002551101,"about_ca_system_score_gemma":0.0007398863,"threshold_uncertainty_score":0.9999876},"labels":[],"label_agreement":null},{"id":"W1970077602","doi":"10.3201/eid1612.100451","title":"Pandemic (H1N1) 2009 Outbreak at Canadian Forces Cadet Camp","year":2010,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Influenza Virus Research Studies","field":"Medicine","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Public Health Agency of Canada","funders":"Health Canada; Centers for Disease Control and Prevention; Ministère de la Défense Nationale; Public Health Agency; Public Health Agency of Canada","keywords":"Cadet; Outbreak; Pandemic; Medicine; Virology; Coronavirus disease 2019 (COVID-19); Biosecurity; Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2); Asthma; Immunology; Internal medicine; Geography; Pathology; Disease; Infectious disease (medical specialty)","score_opus":0.02232498623824804,"score_gpt":0.32970667326767017,"score_spread":0.30738168702942215,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1970077602","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9759214,0.0015790405,0.0000046933555,0.00062814745,0.00065740023,0.00049597956,0.00020903157,0.00039309816,0.02011124],"genre_scores_gemma":[0.9936639,0.0002865789,0.000018003704,0.0015412894,0.00063212094,0.00011429737,0.00005753352,0.000051766856,0.0036345185],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9979648,0.000045223143,0.0002743655,0.00039866834,0.0004346831,0.00088227977],"domain_scores_gemma":[0.99812263,0.00012396388,0.00007142797,0.00045782662,0.0002381201,0.0009860523],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00016773876,0.00027976194,0.0003611152,0.00043731558,0.00074081455,0.000047289213,0.00013932813,0.00013404485,0.0018074384],"category_scores_gemma":[0.0011279999,0.00024464726,0.00018439547,0.00032866033,0.0002447576,0.00014153279,0.0001228339,0.00051093486,0.00066170964],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00005875033,0.000075485055,0.96358836,0.00008380717,0.00018216569,0.00012114161,0.00039831977,0.000029532079,0.0018845431,0.00009948161,0.02984403,0.0036344035],"study_design_scores_gemma":[0.0016628964,0.00017819757,0.6395501,0.00007337793,0.00023278939,0.0001845308,0.00015016309,0.00014922743,0.00039358943,0.00020359771,0.35679823,0.00042329222],"about_ca_topic_score_codex":0.09395995,"about_ca_topic_score_gemma":0.34731907,"teacher_disagreement_score":0.32695422,"about_ca_system_score_codex":0.000427357,"about_ca_system_score_gemma":0.00060027436,"threshold_uncertainty_score":0.99910504},"labels":[],"label_agreement":null},{"id":"W1970353821","doi":"10.3201/eid1304.061329","title":"Spread of Extensively Drug-resistant Tuberculosis","year":2007,"lang":"en","type":"letter","venue":"Emerging infectious diseases","topic":"Tuberculosis Research and Epidemiology","field":"Medicine","cited_by":26,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"Universidad de Zaragoza","keywords":"Extensively drug-resistant tuberculosis; Tuberculosis; Drug resistance; Virology; Medicine; Mycobacterium tuberculosis; Drug; Biology; Microbiology; Pharmacology; Pathology","score_opus":0.01753373958457208,"score_gpt":0.31300418583657724,"score_spread":0.29547044625200514,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1970353821","genre_codex":"commentary","genre_gemma":"commentary","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"commentary","genre_consensus":"commentary","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.14274143,0.0154593615,0.00013397376,0.81384116,0.0016833015,0.0018934227,0.00086811493,0.0008469252,0.022532297],"genre_scores_gemma":[0.1689427,0.0025384512,0.00012954624,0.81491053,0.0071684853,0.00016313481,0.0016415234,0.0002837042,0.004221893],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9958153,0.00034877664,0.00093990535,0.0008243591,0.0008956261,0.0011760588],"domain_scores_gemma":[0.9965844,0.0010074214,0.000385732,0.00093431404,0.0006603257,0.00042779205],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00040114444,0.00060505845,0.0015544584,0.0010387409,0.00015834876,0.00002121333,0.00023338539,0.00066133036,0.0008215289],"category_scores_gemma":[0.0022618347,0.00052937213,0.00093842146,0.0005649763,0.00042417334,0.00008312368,0.00015171588,0.0018108814,0.0001802413],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00021362847,0.00024575173,0.051989473,0.0014834285,0.0009883522,0.0014038302,0.000048461672,0.000012008189,0.0003624477,0.00002353241,0.9415085,0.0017206303],"study_design_scores_gemma":[0.0013187471,0.0005441933,0.089195855,0.0009220948,0.0015116221,0.00020338257,0.000045887467,0.00004599786,0.00033842988,0.00029018678,0.9049336,0.0006500115],"about_ca_topic_score_codex":0.0019276697,"about_ca_topic_score_gemma":0.00006909203,"teacher_disagreement_score":0.03720638,"about_ca_system_score_codex":0.00029356487,"about_ca_system_score_gemma":0.00035110308,"threshold_uncertainty_score":0.9997158},"labels":[],"label_agreement":null},{"id":"W1970813100","doi":"10.3201/eid1803.111099","title":"Chicken as Reservoir for Extraintestinal Pathogenic<i>Escherichia coli</i>in Humans, Canada","year":2012,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Escherichia coli research studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":163,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of Guelph; University of Manitoba; Public Health Agency of Canada; McGill University; University of New Brunswick; McGill University Health Centre","funders":"Institute of Infection and Immunity; Canadian Institutes of Health Research; Public Health Agency; Public Health Agency of Canada; McGill University","keywords":"Escherichia coli; Biology; Microbiology; Disease reservoir; Pathogenic Escherichia coli; Transmission (telecommunications); Veterinary medicine; Food science; Gene; Virology; Genetics; Medicine","score_opus":0.011445241560309998,"score_gpt":0.2803191948987747,"score_spread":0.2688739533384647,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1970813100","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99223596,0.004206418,0.00015041463,0.00021064006,0.00029812052,0.00047609064,0.00008887176,0.00003773547,0.002295759],"genre_scores_gemma":[0.99739313,0.00017656617,0.00014688369,0.0004338702,0.0006182859,0.0004285299,0.00011357605,0.000044302134,0.00064484705],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9983485,0.00011397245,0.00023091256,0.00034211375,0.00023120893,0.0007333253],"domain_scores_gemma":[0.9991542,0.00007765464,0.000072285286,0.000304826,0.00012845136,0.00026257028],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002432042,0.00022793788,0.00019474795,0.000054306493,0.00025545707,0.000026064874,0.00019669185,0.00006413989,0.000043470558],"category_scores_gemma":[0.0012400971,0.00023292535,0.000113599854,0.00017827303,0.000081115446,0.000011902244,0.00015737576,0.00013147059,0.0000042938705],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00016417915,0.00036955602,0.8679556,0.00014129531,0.00014314568,0.000011598015,0.00012213255,0.00022513152,0.11421738,0.00028619546,0.015941419,0.00042232443],"study_design_scores_gemma":[0.0019431616,0.00055856246,0.7674316,0.00007163383,0.00008733684,0.000012255284,0.0004600698,0.00013003577,0.0045295884,0.00029335674,0.2236422,0.0008401714],"about_ca_topic_score_codex":0.032756783,"about_ca_topic_score_gemma":0.17025948,"teacher_disagreement_score":0.20770079,"about_ca_system_score_codex":0.00011448571,"about_ca_system_score_gemma":0.0006367202,"threshold_uncertainty_score":0.9736842},"labels":[],"label_agreement":null},{"id":"W1972002516","doi":"10.3201/eid1103.040538","title":"Mimivirus in Pneumonia Patients","year":2005,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Legionella and Acanthamoeba research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":147,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"Pneumonia; Seroconversion; Virology; Community-acquired pneumonia; Medicine; Legionella; Biology; Microbiology; Virus; Internal medicine; Bacteria","score_opus":0.005399404681747011,"score_gpt":0.2569818840442056,"score_spread":0.2515824793624586,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1972002516","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99622744,0.0004998041,0.000026111818,0.00015915238,0.00010531538,0.000114964336,0.000013271404,0.0000260337,0.0028278849],"genre_scores_gemma":[0.998764,0.00017751228,0.000011206081,0.00027575213,0.0002919609,0.00002809818,0.000067164554,0.000017966342,0.00036636143],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9991814,0.000045029676,0.00013134995,0.00024390126,0.00013060457,0.0002677233],"domain_scores_gemma":[0.999638,0.0000086295695,0.000029328621,0.00018344406,0.000044842374,0.00009574936],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00004565007,0.000107798114,0.00008519851,0.00008357905,0.00007565237,0.000021626285,0.000102504935,0.000052981202,0.000058604164],"category_scores_gemma":[0.00009385417,0.00010609164,0.000064422165,0.00012254,0.000039719445,0.0000067203546,0.000080229045,0.00007096808,0.00006202197],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000030390023,0.00040200073,0.9691333,0.000012610704,0.000018938816,0.0000039206625,0.000034573437,0.0005094668,0.013516718,0.000024754267,0.003566861,0.012746459],"study_design_scores_gemma":[0.0021651038,0.00026974038,0.83700323,0.000026947626,0.000017619488,0.000004582136,0.000028124048,0.0002638605,0.013135099,0.00009951633,0.14654623,0.00043997462],"about_ca_topic_score_codex":0.000073751595,"about_ca_topic_score_gemma":0.00019186422,"teacher_disagreement_score":0.14297937,"about_ca_system_score_codex":0.000030948042,"about_ca_system_score_gemma":0.000046046407,"threshold_uncertainty_score":0.43262914},"labels":[],"label_agreement":null},{"id":"W1972548672","doi":"10.3201/eid1907.120871","title":"Influence of Humans on Evolution and Mobilization of Environmental Antibiotic Resistome","year":2013,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Pharmaceutical and Antibiotic Environmental Impacts","field":"Environmental Science","cited_by":158,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Agriculture and Agri-Food Canada","funders":"","keywords":"Resistome; Antibiotic resistance; Public health; Biology; Antibiotics; Mobilization; Infectious disease (medical specialty); Disease; Intensive care medicine; Environmental health; Microbiology; Medicine; Political science; Pathology","score_opus":0.006044363638660554,"score_gpt":0.2361268441411491,"score_spread":0.23008248050248853,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1972548672","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9982315,0.000095291696,0.000037070262,0.000026344875,0.000024161638,0.0002076529,0.00001976297,0.000025239311,0.0013330135],"genre_scores_gemma":[0.99972934,0.000091260204,0.000018201572,0.00007041305,0.000008949629,0.000002543771,0.000004925551,0.00001037449,0.000063975254],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9991472,0.000043430446,0.00021034907,0.00021037526,0.00022099743,0.0001676477],"domain_scores_gemma":[0.9995777,0.000042136056,0.00011099174,0.00014416284,0.0000023769346,0.00012260846],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00004501162,0.00012260444,0.00013911627,0.000049617007,0.00008186928,0.000007332762,0.00006986659,0.00003358661,0.00064895564],"category_scores_gemma":[0.00003991781,0.00011111951,0.00004243768,0.0001129471,0.0004479559,0.000263266,0.000093586124,0.00005287747,0.000114151735],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000074091286,0.0003898843,0.77092063,0.000035513207,0.000010066395,6.0232065e-7,0.000057264744,0.014730284,0.21263227,0.00007313585,0.000054424647,0.0010885271],"study_design_scores_gemma":[0.0002533582,0.00017381759,0.9858247,0.000046287292,0.000031582513,0.0000017763946,0.00003852938,0.0006172367,0.012352245,0.0005240433,0.000023360926,0.0001130858],"about_ca_topic_score_codex":0.00026180572,"about_ca_topic_score_gemma":0.0000044852677,"teacher_disagreement_score":0.21490405,"about_ca_system_score_codex":0.00009609111,"about_ca_system_score_gemma":0.0000033701767,"threshold_uncertainty_score":0.71056086},"labels":[],"label_agreement":null},{"id":"W1972779294","doi":"10.3201/eid1209.051663","title":"Nosocomial Tuberculosis in India","year":2006,"lang":"en","type":"review","venue":"Emerging infectious diseases","topic":"Tuberculosis Research and Epidemiology","field":"Medicine","cited_by":78,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"","keywords":"Tuberculosis; Transmission (telecommunications); Medicine; Psychological intervention; Infection control; Environmental health; Developing country; Intensive care medicine; Health care; Economic growth; Computer science; Pathology; Nursing","score_opus":0.026437824226803838,"score_gpt":0.37163153764296314,"score_spread":0.3451937134161593,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1972779294","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00040319908,0.98681015,0.0000040436767,0.00012968744,0.00038722903,0.001233269,0.00012390503,0.000250914,0.010657611],"genre_scores_gemma":[0.0008645394,0.9957727,0.000014070731,0.00030444405,0.0010935949,0.000601439,0.00091500615,0.000114718576,0.00031947062],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9964358,0.0005607953,0.0009986936,0.0007373768,0.00035274038,0.00091454573],"domain_scores_gemma":[0.9981104,0.0005970423,0.0002311641,0.0005652972,0.000065198845,0.00043090302],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00029751382,0.00060595665,0.0028517295,0.0012034356,0.00011502519,0.00003420982,0.00018587729,0.00049662753,0.00040346905],"category_scores_gemma":[0.001066588,0.00049903867,0.0011834848,0.001002555,0.00013478003,0.000083724444,0.00014224993,0.0009958093,0.00043253825],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00002864327,0.00086534413,0.07692529,0.020189542,0.00062424573,0.00054588553,0.000015691281,0.000010049448,2.599782e-7,0.00015157816,0.04924232,0.85140115],"study_design_scores_gemma":[0.0007449665,0.00014932107,0.023254767,0.005974884,0.0012929473,0.00017775079,0.0000034069644,0.000011379038,1.2973142e-7,0.00007638856,0.967879,0.0004350738],"about_ca_topic_score_codex":0.0009040294,"about_ca_topic_score_gemma":0.00010168511,"teacher_disagreement_score":0.9186367,"about_ca_system_score_codex":0.0006285111,"about_ca_system_score_gemma":0.00060479314,"threshold_uncertainty_score":0.99974614},"labels":[],"label_agreement":null},{"id":"W1973308718","doi":"10.3201/eid1810.120202","title":"Attributing Cause of Death for Patients with<i>Clostridium difficile</i>Infection","year":2012,"lang":"en","type":"letter","venue":"Emerging infectious diseases","topic":"Clostridium difficile and Clostridium perfringens research","field":"Medicine","cited_by":9,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Université Laval; Institut National de Santé Publique du Québec; McGill University Health Centre","funders":"","keywords":"Clostridium difficile; Microbiology; Clostridium Infections; Medicine; Clostridium; Biology; Antibiotics; Bacteria","score_opus":0.02296163854744704,"score_gpt":0.28939851052970583,"score_spread":0.2664368719822588,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1973308718","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9706336,0.0012657323,0.00032725747,0.01840204,0.0014321472,0.0039731055,0.0024593684,0.0005668814,0.0009398627],"genre_scores_gemma":[0.96763396,0.00033499094,0.00006122306,0.01423197,0.008026496,0.00059509213,0.0077264505,0.00040250213,0.0009873204],"study_design_codex":"observational","study_design_gemma":"not_applicable","domain_scores_codex":[0.99542004,0.00012724086,0.00088332617,0.00086999557,0.0012736138,0.001425799],"domain_scores_gemma":[0.9961477,0.00059197494,0.0006526401,0.00090383727,0.0013151253,0.00038875017],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0001907286,0.00085046026,0.0013230261,0.0007072712,0.0003836948,0.00006533695,0.00019046757,0.00074431364,0.00033915462],"category_scores_gemma":[0.00076058914,0.0007383165,0.0007561406,0.00066727574,0.00018134905,0.000170274,0.00014876336,0.0014386368,0.000042042437],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00059541105,0.0019629635,0.61692476,0.003665799,0.001315576,0.00007111739,0.000050756924,0.00003299383,0.00019638978,0.000017024357,0.37353498,0.001632206],"study_design_scores_gemma":[0.016872402,0.006585511,0.143044,0.0029871613,0.012162874,0.0001479178,0.000032096235,0.00015056755,0.016692964,0.00006216624,0.798292,0.0029703835],"about_ca_topic_score_codex":0.00034874727,"about_ca_topic_score_gemma":0.000011046861,"teacher_disagreement_score":0.4738808,"about_ca_system_score_codex":0.0006991136,"about_ca_system_score_gemma":0.00053962716,"threshold_uncertainty_score":0.9995068},"labels":[],"label_agreement":null},{"id":"W1973418860","doi":"10.3201/eid1002.030838","title":"SARS among Critical Care Nurses, Toronto","year":2004,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Infection Control and Ventilation","field":"Medicine","cited_by":345,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Grace (Canada); The Scarborough Hospital; Health Canada; Toronto Public Health; Mount Sinai Hospital; McMaster University","funders":"Canadian Institutes of Health Research; Ontario Ministry of Health and Long-Term Care; McMaster University","keywords":"Medicine; Intubation; Respirator; Cohort; Emergency medicine; Retrospective cohort study; Coronavirus disease 2019 (COVID-19); Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2); Cohort study; Intensive care medicine; Anesthesia; Surgery; Internal medicine; Disease","score_opus":0.007431754914532806,"score_gpt":0.3037301749082542,"score_spread":0.2962984199937214,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1973418860","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.96722436,0.0020624662,0.0049047694,0.0003924791,0.0020827446,0.00041561812,0.00001894215,0.00075232127,0.0221463],"genre_scores_gemma":[0.99872875,0.000025930947,0.00003259197,0.00028347527,0.0006184441,0.000050151357,0.00005647389,0.000027899352,0.0001762944],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99904335,0.000026678965,0.00019810445,0.0002490103,0.00022062415,0.0002622631],"domain_scores_gemma":[0.9993242,0.00002596211,0.000041120988,0.00020280325,0.0002043326,0.0002015794],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00003245067,0.0001566577,0.00020208834,0.00006944396,0.00024201184,0.000038378355,0.00003172616,0.00007112166,0.00044329598],"category_scores_gemma":[0.0002554435,0.0001509398,0.00019530575,0.00011336709,0.00007028044,0.00028481745,0.00001611503,0.000101351,0.0000695389],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010940607,0.00063369976,0.98215216,0.00026850487,0.00010444105,0.000076256554,0.0009708865,0.000861582,0.00034274385,0.004801326,0.0010010208,0.008677957],"study_design_scores_gemma":[0.0034049598,0.00050694,0.9864232,0.00021528629,0.000611328,0.00007508363,0.00096771464,0.0002342076,0.00054612535,0.0007949754,0.0058786534,0.0003415472],"about_ca_topic_score_codex":0.0015089929,"about_ca_topic_score_gemma":0.0006698934,"teacher_disagreement_score":0.031504378,"about_ca_system_score_codex":0.00042824374,"about_ca_system_score_gemma":0.000109117405,"threshold_uncertainty_score":0.61551464},"labels":[],"label_agreement":null},{"id":"W1974401270","doi":"10.3201/eid0803.010194","title":"Novel C<i>ryptosporidium</i> Genotypes in Sporadic Cryptosporidiosis Cases: First Report of Human Infections with a Cervine Genotype","year":2002,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Parasitic Infections and Diagnostics","field":"Immunology and Microbiology","cited_by":193,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Surrey Memorial Hospital; BC Centre for Disease Control; University of British Columbia","funders":"British Columbia Centre for Disease Control; University of British Columbia","keywords":"Cryptosporidium; Genotype; Genotyping; Biology; Hypervariable region; Polymerase chain reaction; Restriction fragment length polymorphism; Internal transcribed spacer; Feces; Gene; 18S ribosomal RNA; Genetics; Restriction enzyme; Ribosomal RNA; Virology; Microbiology","score_opus":0.0125641937665635,"score_gpt":0.24138258226714782,"score_spread":0.2288183885005843,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1974401270","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99079657,0.0023735191,0.00080771476,0.000115158604,0.0006881794,0.00038901102,0.00011630923,0.0002656205,0.004447922],"genre_scores_gemma":[0.99888897,0.0002610762,0.00006204582,0.000058331894,0.00010053547,0.000103967934,0.00015771296,0.00004613056,0.00032124564],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99824053,0.00006029745,0.0006445428,0.00046744465,0.00009205946,0.00049513887],"domain_scores_gemma":[0.9985255,0.00030838847,0.0003451883,0.0005342421,0.00021168859,0.000074996424],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0001152201,0.00033756954,0.00051469525,0.00050242664,0.0005170863,0.000021096828,0.00013848646,0.00018167355,0.0018597823],"category_scores_gemma":[0.00040512646,0.0003200805,0.00016351545,0.0008952829,0.0002979943,0.00018355495,0.000059677637,0.00029041478,0.00012668465],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000048104386,0.0030721803,0.98351914,0.00011723164,0.00032655627,0.00071641244,0.00041316025,0.0015765162,0.006111782,0.0014198731,0.0024036407,0.00027543152],"study_design_scores_gemma":[0.008889965,0.0033202895,0.92843264,0.00063233613,0.0013296856,0.016466735,0.00039165607,0.00010039704,0.009133389,0.0006112667,0.028813647,0.0018779607],"about_ca_topic_score_codex":0.0037816653,"about_ca_topic_score_gemma":0.0023384485,"teacher_disagreement_score":0.055086438,"about_ca_system_score_codex":0.000143001,"about_ca_system_score_gemma":0.000078692996,"threshold_uncertainty_score":0.99992514},"labels":[],"label_agreement":null},{"id":"W1975385560","doi":"10.3201/eid1604.091152","title":"Hypervirulent<i>Clostridium difficile</i>Strains in Hospitalized Patients, Canada1","year":2010,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Clostridium difficile and Clostridium perfringens research","field":"Medicine","cited_by":55,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Public Health Agency of Canada","funders":"","keywords":"Clostridium difficile; Incidence (geometry); Medicine; C difficile; Microbiology; Biology; Antibiotics","score_opus":0.007261190678004468,"score_gpt":0.25955251282637026,"score_spread":0.2522913221483658,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1975385560","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98908573,0.00024726594,0.0000045311335,0.0008364992,0.0010092801,0.0008349019,0.00019000874,0.0003042545,0.007487538],"genre_scores_gemma":[0.9981574,0.00015399016,0.000023430011,0.00033551862,0.0004237165,0.00012468731,0.00027762033,0.000085835454,0.00041784346],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9969044,0.00007010067,0.00057723495,0.0006722127,0.00083046913,0.00094561983],"domain_scores_gemma":[0.99812955,0.00009642656,0.00011633842,0.00069051614,0.00028118608,0.00068599527],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00015580237,0.00042533153,0.0005703657,0.00052452245,0.00023475595,0.00007690247,0.00022604964,0.0001951046,0.0014801578],"category_scores_gemma":[0.0008356974,0.0004114256,0.00029321449,0.00089414354,0.00018378788,0.00014884768,0.00013705993,0.00089334795,0.00012344251],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00019255889,0.003029237,0.9647284,0.00018380524,0.00011245618,0.00022397032,0.00014223052,0.00003367187,0.017842362,0.00020021474,0.0061256103,0.0071854577],"study_design_scores_gemma":[0.008304576,0.0006335541,0.9551689,0.00014311813,0.00022681033,0.000037687918,0.00012412149,0.00034939285,0.015187378,0.0001019946,0.018930502,0.000791947],"about_ca_topic_score_codex":0.0036375667,"about_ca_topic_score_gemma":0.0025505656,"teacher_disagreement_score":0.012804893,"about_ca_system_score_codex":0.00032311474,"about_ca_system_score_gemma":0.0005966702,"threshold_uncertainty_score":0.99983376},"labels":[],"label_agreement":null},{"id":"W1975742110","doi":"10.3201/eid1811.120072","title":"Mycoplasmosis in Ferrets","year":2012,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Microbial infections and disease research","field":"Immunology and Microbiology","cited_by":10,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"College of Engineering, Michigan State University; Michigan State University","keywords":"Biology; Mycoplasma; Outbreak; Bronchoalveolar lavage; Pathology; Pneumonia; Respiratory disease; Polymerase chain reaction; Lung; Atypical pneumonia; Virology; Microbiology; Medicine; Gene; Internal medicine","score_opus":0.012263204478208025,"score_gpt":0.2815786649022633,"score_spread":0.2693154604240553,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1975742110","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98278064,0.008076525,0.000063710446,0.00007626558,0.0011663912,0.0002016152,0.000041782554,0.00022692893,0.00736614],"genre_scores_gemma":[0.9987883,0.00016388438,0.0000034809843,0.000119978475,0.00009353534,0.0000757493,0.00007487763,0.000020985628,0.00065919716],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9986756,0.00018523565,0.00021636834,0.0002108077,0.000039926977,0.0006721027],"domain_scores_gemma":[0.9994865,0.00010561974,0.000044261502,0.00022532127,0.000040827923,0.00009744627],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00016040608,0.00016589637,0.00019823114,0.00032924867,0.00023810363,0.000023708362,0.000092958006,0.00011160543,0.0042365286],"category_scores_gemma":[0.00015671416,0.00016054534,0.00012561155,0.0004129182,0.000098311604,0.0002508965,0.000084960215,0.00021790905,0.0018956217],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00003997852,0.0010736639,0.95870745,0.000036249512,0.000091629736,0.0000062857785,0.00021648394,0.00005706628,0.021592395,0.0013130339,0.012556159,0.0043096207],"study_design_scores_gemma":[0.0038336946,0.00016540426,0.8186327,0.00012710954,0.00016882923,0.00028480298,0.00037683072,0.00002149767,0.011562862,0.00056806847,0.16328745,0.000970745],"about_ca_topic_score_codex":0.00042828787,"about_ca_topic_score_gemma":0.000064189066,"teacher_disagreement_score":0.15073128,"about_ca_system_score_codex":0.000109834946,"about_ca_system_score_gemma":0.000058968806,"threshold_uncertainty_score":0.9988815},"labels":[],"label_agreement":null},{"id":"W1977002830","doi":"10.3201/eid1803.111281","title":"<i>Escherichia coli</i>O104:H4 Infections and International Travel","year":2012,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Escherichia coli research studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":15,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Public Health Agency of Canada; University of Toronto; Public Health Ontario","funders":"Public Health Agency; Public Health Agency of Canada","keywords":"Escherichia coli; Microbiology; Biology; Virology; Medicine; Genetics; Gene","score_opus":0.010945401237396249,"score_gpt":0.2854619667656223,"score_spread":0.27451656552822606,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1977002830","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9844277,0.0029804534,0.000843883,0.00023233515,0.00063811475,0.0001674544,0.00003591463,0.00005628261,0.01061788],"genre_scores_gemma":[0.9964573,0.0012091117,0.000072742056,0.00034390547,0.0007951298,0.00011179738,0.000050676976,0.00002551242,0.000933841],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99906796,0.000066683766,0.00013958583,0.0002343437,0.00013923978,0.00035218263],"domain_scores_gemma":[0.9994369,0.000029211695,0.000050336257,0.00017576177,0.000095259034,0.00021254529],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00011041242,0.00016514363,0.00012316956,0.0000736132,0.00025748703,0.000044900517,0.00009562695,0.00006270517,0.00007711045],"category_scores_gemma":[0.00034473877,0.0001655371,0.000081487655,0.00013947842,0.00012665607,0.000020193202,0.0001988229,0.00010708786,0.000016277463],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000029331988,0.0004941567,0.91087174,0.00003189574,0.0003126249,0.0000011573102,0.00014441162,0.000035477427,0.07745837,0.00052170537,0.00832989,0.0017692558],"study_design_scores_gemma":[0.0011592411,0.00031157583,0.81696635,0.000022921386,0.00011084334,0.000027820062,0.0002984161,0.00015829314,0.0041620987,0.00019001275,0.17604151,0.0005508889],"about_ca_topic_score_codex":0.00005124323,"about_ca_topic_score_gemma":0.000039407947,"teacher_disagreement_score":0.16771163,"about_ca_system_score_codex":0.000027123675,"about_ca_system_score_gemma":0.00005006348,"threshold_uncertainty_score":0.67504066},"labels":[],"label_agreement":null},{"id":"W1978457307","doi":"10.3201/eid1708.101380","title":"Saffold Virus Infection in Children, Malaysia, 2009","year":2011,"lang":"en","type":"letter","venue":"Emerging infectious diseases","topic":"Viral Infections and Immunology Research","field":"Medicine","cited_by":21,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"International Medical University","keywords":"Sore throat; myalgia; Medicine; Pharyngitis; Diarrhea; Isolation (microbiology); Virology; Nose; Throat; Abdominal pain; Pediatrics; Internal medicine; Immunology; Biology; Surgery; Microbiology","score_opus":0.014972852972610808,"score_gpt":0.2796988678923869,"score_spread":0.2647260149197761,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1978457307","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9391049,0.0065299226,0.00009146168,0.034155186,0.0018957754,0.0021302386,0.00023378676,0.001147941,0.014710802],"genre_scores_gemma":[0.64174587,0.021216195,0.000033400735,0.30399957,0.011998224,0.0014684707,0.004035169,0.0006694475,0.014833612],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99700594,0.00025456716,0.0006039979,0.000801373,0.00039650672,0.00093759294],"domain_scores_gemma":[0.99856454,0.00006310943,0.00022044241,0.00080172793,0.00019308837,0.00015707969],"candidate_categories":["metaepi_narrow","research_integrity","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.0001624035,0.0006034804,0.0008455509,0.00177781,0.00025786486,0.00006915807,0.00015744522,0.0010213045,0.0024505735],"category_scores_gemma":[0.00021377631,0.0005906512,0.0005123781,0.000966561,0.00024038994,0.000253662,0.00014603918,0.003052714,0.0009326933],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000041543757,0.00044706784,0.6075108,0.00012406475,0.00038118367,0.000200513,0.000022240463,0.000020802354,0.000047661495,0.000008577791,0.3893329,0.0018626695],"study_design_scores_gemma":[0.0018700709,0.0008716233,0.74571854,0.00039498447,0.0005964059,0.00057904556,0.000003384876,0.00004646616,0.00011826571,0.00029274204,0.24879366,0.0007147858],"about_ca_topic_score_codex":0.010003072,"about_ca_topic_score_gemma":0.00018929409,"teacher_disagreement_score":0.297359,"about_ca_system_score_codex":0.0003935508,"about_ca_system_score_gemma":0.00027912002,"threshold_uncertainty_score":0.9998452},"labels":[],"label_agreement":null},{"id":"W1978623635","doi":"10.3201/eid1401.070163","title":"Human Ophthalmomyiasis Interna Caused by<i>Hypoderma tarandi,</i>Northern Canada","year":2008,"lang":"en","type":"review","venue":"Emerging infectious diseases","topic":"Forensic Entomology and Diptera Studies","field":"Agricultural and Biological Sciences","cited_by":56,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Agriculture and Agri-Food Canada; University of Manitoba","funders":"","keywords":"Myiasis; Vitrectomy; Larva; Biology; Dermatology; Anatomy; Ophthalmology; Medicine; Botany; Visual acuity","score_opus":0.019918906089258254,"score_gpt":0.26288946712850914,"score_spread":0.24297056103925088,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1978623635","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.034920402,0.9617838,1.5522276e-7,0.00006325018,0.0006713737,0.00033854443,0.00061983237,0.00016961007,0.0014330324],"genre_scores_gemma":[0.03379606,0.9636567,3.4181122e-7,0.00016813545,0.00045035392,0.00013788848,0.000858951,0.000007187817,0.000924386],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9978927,0.00018543692,0.00051556976,0.00059307454,0.00029473167,0.0005185217],"domain_scores_gemma":[0.9990403,0.00021252545,0.00032788422,0.0001340297,0.000074172174,0.00021106725],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.000036233356,0.00059830706,0.001230519,0.00003193239,0.0008459171,0.000045576227,0.00035809077,0.00019142551,0.00050230284],"category_scores_gemma":[0.00006253349,0.0002511945,0.00055254705,0.0003276929,0.00016925769,0.000072512565,0.00016109378,0.0002940996,0.000047298672],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000004747237,0.00029746201,0.02672662,0.0011391775,0.00090903573,0.00047926695,0.00006055442,0.0000029694743,0.0000036430538,0.000014494781,0.18719272,0.7831693],"study_design_scores_gemma":[0.00012444142,0.000090441026,0.0019993016,0.00088476524,0.0003542719,0.00012698847,0.000023365796,3.2061345e-7,9.619189e-7,0.000021774313,0.9957941,0.00057924126],"about_ca_topic_score_codex":0.2763363,"about_ca_topic_score_gemma":0.573238,"teacher_disagreement_score":0.8086014,"about_ca_system_score_codex":0.00022263527,"about_ca_system_score_gemma":0.000116498864,"threshold_uncertainty_score":0.99999404},"labels":[],"label_agreement":null},{"id":"W1979680557","doi":"10.3201/eid1206.051548","title":"Pets in Voluntary Household Quarantine","year":2006,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"SARS-CoV-2 and COVID-19 Research","field":"Medicine","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of Guelph","funders":"","keywords":"Quarantine; Outbreak; Transmission (telecommunications); Environmental health; Medicine; Contact tracing; Pandemic; Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2); Coronavirus disease 2019 (COVID-19); Animal welfare; Turnover; Disease; Veterinary medicine; Infectious disease (medical specialty); Virology; Biology; Pathology","score_opus":0.016328211659645365,"score_gpt":0.29926790434597667,"score_spread":0.2829396926863313,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1979680557","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98939013,0.0015871949,0.000056734654,0.00024881473,0.00019919447,0.00029718105,0.00001631874,0.00039924096,0.007805187],"genre_scores_gemma":[0.9914809,0.000008750565,0.000011950757,0.0077752015,0.00050710933,0.000059419624,0.000016315922,0.000045639554,0.000094712486],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99846566,0.00005022215,0.00029042806,0.00034885047,0.00038170608,0.00046314998],"domain_scores_gemma":[0.9994356,0.00008276588,0.000048500402,0.00032300813,0.00005907951,0.000051039216],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00011810167,0.00019378278,0.00029161279,0.00044731033,0.00010048134,0.0000334878,0.000091410526,0.000064249194,0.00004910395],"category_scores_gemma":[0.00011792678,0.00018469292,0.00015423131,0.000598848,0.0000791443,0.000119840486,0.000051623978,0.00023383948,0.00009323014],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011359792,0.00071422826,0.98966104,0.00012986168,0.000028004317,0.00037629,0.00003735,0.000044231347,0.003536673,0.000114166345,0.0040023695,0.0012421891],"study_design_scores_gemma":[0.002602096,0.00016446224,0.94349784,0.000130193,0.00007433228,0.00006463147,0.000033984612,0.0005131287,0.0029052556,0.00045437424,0.049311142,0.00024858108],"about_ca_topic_score_codex":0.0045730327,"about_ca_topic_score_gemma":0.00070054544,"teacher_disagreement_score":0.04616322,"about_ca_system_score_codex":0.00013710355,"about_ca_system_score_gemma":0.00016932026,"threshold_uncertainty_score":0.7531558},"labels":[],"label_agreement":null},{"id":"W1980091729","doi":"10.3201/eid1410.080102","title":"Endemic and Epidemic Lineages of<i>Escherichia coli</i>that Cause Urinary Tract Infections","year":2008,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Urinary Tract Infections Management","field":"Medicine","cited_by":118,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Research Manitoba; McGill University; McGill University Health Centre","funders":"Canadian Institutes of Health Research; Department of Epidemiology, Biostatistics and Occupational Health, McGill University; McGill University Health Centre; Canadian Association of Gastroenterology; McGill University","keywords":"Multilocus sequence typing; Biology; Escherichia coli; Serotype; Microbiology; Intergenic region; Typing; Transmission (telecommunications); Molecular epidemiology; Phylogenetic tree; Virology; Genotype; Genetics; Genome; Gene","score_opus":0.02712943110852757,"score_gpt":0.2873101005420081,"score_spread":0.26018066943348056,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1980091729","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99187535,0.0022420946,0.0004689436,0.00028745455,0.00052247476,0.0006105961,0.000022286238,0.00061945594,0.0033513345],"genre_scores_gemma":[0.9944667,0.003966272,0.0001120525,0.00030265722,0.00029707115,0.00013241026,0.00003616953,0.000060773866,0.0006258856],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99828595,0.00012579853,0.00047264615,0.00044358944,0.0002864936,0.00038550782],"domain_scores_gemma":[0.99855834,0.00029055326,0.00023810763,0.00048078803,0.00011734059,0.00031486244],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00015939074,0.00033033878,0.0005240872,0.0005150456,0.00044187193,0.000015766676,0.00007357806,0.000110292174,0.00021822212],"category_scores_gemma":[0.00033181204,0.00033836448,0.0002496782,0.0005787186,0.00029602312,0.00032892937,0.000098382414,0.0003676141,0.000036314508],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000058648337,0.0091118105,0.9863003,0.00024713972,0.0003968992,0.00031690535,0.00031838275,0.0004193618,0.000719808,0.00009531665,0.0016521224,0.0003632914],"study_design_scores_gemma":[0.0015872181,0.0031754833,0.97782606,0.00014774718,0.0009272873,0.0023644234,0.00011418191,0.00022146731,0.00043151138,0.000089044726,0.012765149,0.00035044728],"about_ca_topic_score_codex":0.00023480674,"about_ca_topic_score_gemma":0.000008661389,"teacher_disagreement_score":0.011113026,"about_ca_system_score_codex":0.00013950787,"about_ca_system_score_gemma":0.00013993829,"threshold_uncertainty_score":0.99990684},"labels":[],"label_agreement":null},{"id":"W1981364103","doi":"10.3201/eid1002.031032","title":"Wresting SARS from Uncertainty","year":2004,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"SARS-CoV-2 and COVID-19 Research","field":"Medicine","cited_by":35,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Public health; Outbreak; Declaration; Global health; International community; China; Severe acute respiratory syndrome; Medicine; International Health Regulations; Pandemic; Tourism; Health care; Transmission (telecommunications); Environmental health; Disease; Coronavirus disease 2019 (COVID-19); Political science; Infectious disease (medical specialty); Virology; Law; Pathology","score_opus":0.024297568465840642,"score_gpt":0.33429525713051983,"score_spread":0.3099976886646792,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1981364103","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9913678,0.0008919875,0.00039009383,0.00035329704,0.0002906211,0.00025076966,0.00002524844,0.00052842876,0.005901713],"genre_scores_gemma":[0.98347855,0.0000078646335,0.00006305159,0.015782423,0.0005490141,0.000045082077,0.000019081835,0.00003895317,0.000015955315],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99851835,0.000038066126,0.00022560342,0.00038140736,0.00041403685,0.00042255624],"domain_scores_gemma":[0.9992364,0.00012899906,0.000058370533,0.00036026098,0.000116754854,0.000099230674],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00008247281,0.000194369,0.00026204844,0.00018344121,0.0002232591,0.000054153857,0.000107674554,0.00006694155,0.0000574897],"category_scores_gemma":[0.0006810712,0.00017872613,0.00017720167,0.0004083784,0.00010259728,0.00010820821,0.00007508249,0.00023399113,0.00023755708],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00017258324,0.00058031245,0.9675754,0.00010344583,0.00020837522,0.00039300253,0.0003741873,0.00054896617,0.017810794,0.0003160883,0.0008222289,0.011094675],"study_design_scores_gemma":[0.020449076,0.0014215905,0.6789516,0.0016491027,0.0011754271,0.00021928425,0.000821447,0.0022403963,0.061200164,0.030326672,0.19965453,0.0018906902],"about_ca_topic_score_codex":0.005116,"about_ca_topic_score_gemma":0.00018651254,"teacher_disagreement_score":0.28862372,"about_ca_system_score_codex":0.00028889847,"about_ca_system_score_gemma":0.00038767225,"threshold_uncertainty_score":0.7733896},"labels":[],"label_agreement":null},{"id":"W1981527891","doi":"10.3201/eid0805.010337","title":"Outbreak of Neisseria meningitidis, Edmonton, Alberta, Canada","year":2002,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":30,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Capital District Health Authority; Provincial Laboratory of Public Health; University of Alberta","funders":"Centers for Disease Control and Prevention; University of Alberta","keywords":"Neisseria meningitidis; Outbreak; Serotype; clone (Java method); Virology; Meningococcal disease; Microbiology; Biology; Medicine; Bacteria; Genetics; Gene","score_opus":0.006460618427410022,"score_gpt":0.20615206977539732,"score_spread":0.1996914513479873,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1981527891","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9868408,0.0022621667,0.000009498142,0.00019194846,0.0019497394,0.000119091404,0.000072567935,0.0000941863,0.0084599955],"genre_scores_gemma":[0.9955387,0.000096553806,0.0000019855709,0.000059571335,0.00008299843,0.000023916486,0.000060855327,0.000019668441,0.004115761],"study_design_codex":"observational","study_design_gemma":"not_applicable","domain_scores_codex":[0.9991239,0.000071423994,0.0002895944,0.00021138022,0.000017422462,0.00028627802],"domain_scores_gemma":[0.9993884,0.000105842504,0.00013450404,0.00024369525,0.00008444651,0.000043110926],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00002869942,0.0001784631,0.0002697364,0.00008451522,0.00022357587,0.000013344483,0.000100215846,0.00007756246,0.0094070295],"category_scores_gemma":[0.000115580195,0.00016804719,0.00010120715,0.00018037533,0.00005180586,0.000103494895,0.00004420451,0.000094623145,0.000117996744],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000083030835,0.0010401418,0.5607962,0.00013161474,0.0010328789,0.000004919865,0.00065569015,0.000121517965,0.14962149,0.0017190932,0.2765322,0.008261236],"study_design_scores_gemma":[0.002686265,0.0003415494,0.34033567,0.00010138633,0.00039743344,0.0001540221,0.00025791465,0.00003637623,0.018115748,0.00017761103,0.63656265,0.000833358],"about_ca_topic_score_codex":0.626771,"about_ca_topic_score_gemma":0.44886047,"teacher_disagreement_score":0.36003047,"about_ca_system_score_codex":0.000059265723,"about_ca_system_score_gemma":0.000071234914,"threshold_uncertainty_score":0.99149853},"labels":[],"label_agreement":null},{"id":"W1983930574","doi":"10.3201/eid1909.130064","title":"New Estimates of Incidence of Encephalitis in England","year":2013,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Herpesvirus Infections and Treatments","field":"Medicine","cited_by":130,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Public Health Ontario","funders":"National Institute for Health and Care Research; Encephalitis Society","keywords":"Incidence (geometry); Encephalitis; Medicine; Virology; Geography; Demography; Mathematics; Virus","score_opus":0.007466555621873288,"score_gpt":0.27445890243949445,"score_spread":0.2669923468176212,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1983930574","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9964876,0.0005748734,0.00034168622,0.000046178768,0.000094930474,0.0002450656,0.000008664178,0.00004969519,0.002151286],"genre_scores_gemma":[0.99928564,0.00010154994,0.00038204418,0.000023530622,0.000038646423,0.00003349091,0.000007991022,0.000010726366,0.00011639112],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99930906,0.000020813804,0.00026447125,0.00013310296,0.0001296326,0.00014289161],"domain_scores_gemma":[0.99943906,0.000101978076,0.00008807371,0.00016844504,0.00008507744,0.00011737163],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.000035639554,0.0001012188,0.00025532473,0.00018299077,0.000026440535,0.0000063392267,0.00003306963,0.000034980876,0.0011245067],"category_scores_gemma":[0.00023022488,0.00008780354,0.00007360868,0.00029236675,0.00004852709,0.00012440191,0.000021719463,0.00005413184,0.000029019635],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000010393914,0.00030111274,0.93818015,0.00008810765,0.00005735618,0.0000101952255,0.00020885379,0.0000699915,0.0003764943,0.00009658161,0.00014382365,0.060456954],"study_design_scores_gemma":[0.0016911771,0.00023477082,0.99167347,0.0002857989,0.00010906799,0.000023197877,0.00003298678,0.00019718106,0.0030921858,0.0017123069,0.00085866696,0.0000891969],"about_ca_topic_score_codex":0.011962804,"about_ca_topic_score_gemma":0.00020870095,"teacher_disagreement_score":0.06036776,"about_ca_system_score_codex":0.000042130137,"about_ca_system_score_gemma":0.00011162395,"threshold_uncertainty_score":0.9997886},"labels":[],"label_agreement":null},{"id":"W1984993758","doi":"10.3201/eid1311.070279","title":"Medical Students and Pandemic Influenza","year":2007,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Influenza Virus Research Studies","field":"Medicine","cited_by":60,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of Alberta","funders":"Fondation pour la Recherche Médicale; University of Alberta","keywords":"Pandemic; Public health; Influenza pandemic; Medicine; Family medicine; Pandemic influenza; Coronavirus disease 2019 (COVID-19); Virology; Infectious disease (medical specialty); Nursing; Pathology; Disease","score_opus":0.04421475350103204,"score_gpt":0.4275499923945643,"score_spread":0.38333523889353227,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1984993758","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9908214,0.0045675044,0.00012329641,0.00015436571,0.00015848051,0.00030613775,0.0000059186764,0.00035637888,0.0035064928],"genre_scores_gemma":[0.99505,0.0007710932,0.000018709487,0.0035647145,0.00034140213,0.00002537892,0.0000044069347,0.000027263119,0.00019704418],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9974808,0.000041520096,0.00031158095,0.00029455073,0.0013656339,0.0005059059],"domain_scores_gemma":[0.99871296,0.0002519604,0.000052682193,0.00021734559,0.00013656405,0.0006285097],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007155518,0.00018314313,0.00029446435,0.00025454743,0.0002520986,0.000042990152,0.00012991444,0.00009186391,0.00032054275],"category_scores_gemma":[0.00202882,0.00015401524,0.0000834425,0.00027393224,0.00025572535,0.00009928197,0.0002917195,0.00030110875,0.00007466138],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00016516836,0.0002379579,0.98222363,0.00010569169,0.00020014925,0.00016895367,0.0002045128,0.0000018778791,0.00009154047,0.00007839981,0.0013053527,0.015216775],"study_design_scores_gemma":[0.0025273308,0.00018965892,0.9720069,0.00013942579,0.000113544855,0.00009208523,0.00013321641,0.000023973449,0.00005015678,0.00013426795,0.02442711,0.00016229902],"about_ca_topic_score_codex":0.000116755866,"about_ca_topic_score_gemma":0.00006641827,"teacher_disagreement_score":0.023121757,"about_ca_system_score_codex":0.00012007525,"about_ca_system_score_gemma":0.00012381715,"threshold_uncertainty_score":0.62805593},"labels":[],"label_agreement":null},{"id":"W1985834457","doi":"10.3201/eid1212.060584","title":"Long-term Psychological and Occupational Effects of Providing Hospital Healthcare during SARS Outbreak","year":2006,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Healthcare professionals’ stress and burnout","field":"Health Professions","cited_by":1157,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"McMaster University; University of Toronto; Sunnybrook Health Science Centre; North York General Hospital; Health Sciences Centre; Mount Sinai Hospital","funders":"Canadian Institutes of Health Research","keywords":"Outbreak; Medicine; Burnout; Health care; Coping (psychology); Adverse effect; Distress; Occupational stress; Psychiatry; Family medicine; Emergency medicine; Clinical psychology; Internal medicine","score_opus":0.019986169422536653,"score_gpt":0.39659272578035265,"score_spread":0.376606556357816,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1985834457","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9911971,0.00458961,0.00009787436,0.0010045058,0.0013935467,0.0011280777,0.00008231648,0.00026466892,0.00024228418],"genre_scores_gemma":[0.9980637,0.00028033648,0.000044164542,0.00028230244,0.00073396217,0.00031028278,0.000087485794,0.000037380058,0.0001603772],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9972556,0.0004969435,0.00071915943,0.0004936389,0.00037451633,0.00066011393],"domain_scores_gemma":[0.9982977,0.000539712,0.00040952468,0.00025855677,0.00024032194,0.0002542185],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00017406276,0.00026955706,0.00043346087,0.00020091077,0.001180866,0.000014575364,0.000115244686,0.00022652016,0.000090526555],"category_scores_gemma":[0.00031544478,0.00022947005,0.00012081642,0.00023771018,0.000116829586,0.0001816111,0.00016276915,0.00047632877,0.00001876094],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007935549,0.00043203094,0.99007875,0.003617473,0.000025755158,0.000032710257,0.0003249459,0.000005265208,0.00028927246,0.000736344,0.00037895507,0.0039991387],"study_design_scores_gemma":[0.0013396505,0.00020883599,0.9946741,0.0025599038,0.000037668047,0.000005208063,0.000097035176,0.00001484082,0.00010554696,0.0006790469,0.0000401116,0.00023805888],"about_ca_topic_score_codex":0.0011833927,"about_ca_topic_score_gemma":0.00021491665,"teacher_disagreement_score":0.006866593,"about_ca_system_score_codex":0.00014912238,"about_ca_system_score_gemma":0.00020450825,"threshold_uncertainty_score":0.93575174},"labels":[],"label_agreement":null},{"id":"W1985977177","doi":"10.3201/eid1408.080083","title":"Rarity of Influenza A Virus in Spring Shorebirds, Southern Alaska","year":2008,"lang":"en","type":"letter","venue":"Emerging infectious diseases","topic":"Influenza Virus Research Studies","field":"Medicine","cited_by":37,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"Japan Science and Technology Agency; U.S. Department of Agriculture","keywords":"Sandpiper; Calidris; Bay; Geography; Spring (device); Waterfowl; Fishery; Ecology; Biology; Predation; Habitat","score_opus":0.04654713363451255,"score_gpt":0.33630253695393764,"score_spread":0.28975540331942506,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1985977177","genre_codex":"empirical","genre_gemma":"commentary","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9440669,0.020306224,0.000024405848,0.02419968,0.0007448705,0.0023292266,0.000875508,0.00085746753,0.006595734],"genre_scores_gemma":[0.44126692,0.0070159277,0.00017407321,0.53733826,0.00964527,0.00097268756,0.00036473392,0.0008704588,0.0023516868],"study_design_codex":"observational","study_design_gemma":"not_applicable","domain_scores_codex":[0.9958364,0.00023524747,0.00095962326,0.000755716,0.0012011678,0.0010118921],"domain_scores_gemma":[0.99788326,0.00033133084,0.0003608319,0.00086981826,0.00035945198,0.00019533225],"candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.00021610352,0.00066825293,0.0014129026,0.0012321959,0.00020560077,0.000030967007,0.0002811762,0.0005748359,0.00028094812],"category_scores_gemma":[0.0013181561,0.00063917146,0.0005731585,0.0007356911,0.0005048916,0.00013590262,0.00033387003,0.002406113,0.00018163043],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00026055647,0.00044228448,0.7357695,0.0020345272,0.0007509086,0.0019642394,0.0011633257,0.00015925251,0.00013973482,0.0000044453777,0.25627056,0.0010406582],"study_design_scores_gemma":[0.004731386,0.0004405174,0.21506445,0.00217821,0.00067067466,0.00009609032,0.00019189756,0.00009228442,0.00035226854,0.00015921945,0.7747951,0.0012278578],"about_ca_topic_score_codex":0.004927234,"about_ca_topic_score_gemma":0.00032072893,"teacher_disagreement_score":0.52070504,"about_ca_system_score_codex":0.00046749762,"about_ca_system_score_gemma":0.00059455354,"threshold_uncertainty_score":0.9998954},"labels":[],"label_agreement":null},{"id":"W1986450646","doi":"10.3201/eid1505.081084","title":"Possible Seasonality of<i>Clostridium difficile</i>in Retail Meat, Canada","year":2009,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Clostridium difficile and Clostridium perfringens research","field":"Medicine","cited_by":120,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Public Health Agency of Canada; University of Guelph","funders":"Public Health Agency; Public Health Agency of Canada; Ohio State University","keywords":"Clostridium difficile; Seasonality; Transmissibility (structural dynamics); Environmental health; Veterinary medicine; Biology; Food science; Microbiology; Medicine; Ecology; Antibiotics","score_opus":0.013355539186529238,"score_gpt":0.2717564639525355,"score_spread":0.25840092476600623,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1986450646","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98364174,0.0019765443,0.000013234008,0.0020064404,0.00021257253,0.000471192,0.00013051734,0.00012922606,0.011418528],"genre_scores_gemma":[0.99815094,0.00025636217,0.0000140386355,0.00038247977,0.00024924777,0.000017126567,0.00008983091,0.000030338815,0.00080963713],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99709004,0.000103741615,0.00061062403,0.00051427743,0.00096511503,0.00071622926],"domain_scores_gemma":[0.998378,0.00015115533,0.00014256335,0.0005837903,0.00027533417,0.0004691738],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00017173527,0.00032902055,0.0006623485,0.00015980352,0.0001356637,0.000028360837,0.00018167809,0.000104379375,0.00067080016],"category_scores_gemma":[0.0005405418,0.0003171819,0.00025109103,0.0010706283,0.00009503957,0.000094943185,0.00006071221,0.00039921605,0.000012676715],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000936376,0.0031061172,0.9183084,0.00053479115,0.0002283155,0.00079120434,0.00013813048,0.0005490136,0.036994945,0.0007400609,0.019672798,0.017999854],"study_design_scores_gemma":[0.005682059,0.0011365755,0.819225,0.00057773996,0.0003979367,0.00014805896,0.00030341718,0.0011196127,0.15961964,0.0003031704,0.010623674,0.0008631142],"about_ca_topic_score_codex":0.10450253,"about_ca_topic_score_gemma":0.059529155,"teacher_disagreement_score":0.1226247,"about_ca_system_score_codex":0.00056093006,"about_ca_system_score_gemma":0.0020445613,"threshold_uncertainty_score":0.999928},"labels":[],"label_agreement":null},{"id":"W1986790321","doi":"10.3201/eid2106.150176","title":"Lack of Protection Against Ebola Virus from Chloroquine in Mice and Hamsters","year":2015,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Viral Infections and Outbreaks Research","field":"Medicine","cited_by":63,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"NHLBI Division of Intramural Research; Division of Intramural Research, National Institute of Allergy and Infectious Diseases; National Institute of Allergy and Infectious Diseases; National Institutes of Health; University of Saskatchewan; U.S. Department of Agriculture","keywords":"Virology; Ebola virus; Chloroquine; Biology; Ebolavirus; Virus; Ebola vaccine; Malaria; Medicine; Immunology","score_opus":0.05414434512205232,"score_gpt":0.3350290951573257,"score_spread":0.28088475003527336,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1986790321","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9960592,0.0007724683,0.0002013137,0.00025275146,0.00016878876,0.00041302448,0.000029707722,0.000092949915,0.002009828],"genre_scores_gemma":[0.9992765,0.00016629112,0.000024761062,0.00013756953,0.00014756128,0.00005482757,0.000028447022,0.000020910606,0.00014309729],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9990109,0.000068638044,0.00025100593,0.00024093216,0.0002241228,0.0002043914],"domain_scores_gemma":[0.99939626,0.00003468825,0.00007066813,0.00014600625,0.00013008266,0.00022226224],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013815539,0.00013148232,0.00026920528,0.00029928633,0.00005629272,0.000022387374,0.000032815384,0.000063154774,0.000044454606],"category_scores_gemma":[0.00024500978,0.00012041469,0.00006470068,0.00037440532,0.000096537,0.00014671768,0.000054393004,0.0001749012,0.000018223145],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0009448493,0.0015172194,0.7831282,0.0003748614,0.00024690907,0.00010228235,0.0012340364,0.00091756973,0.16160588,0.00006325566,0.0015946454,0.048270307],"study_design_scores_gemma":[0.013753757,0.002304833,0.9145633,0.0009108458,0.00032775805,0.00008398142,0.0012861855,0.010294872,0.046987906,0.0009769476,0.007781196,0.0007284301],"about_ca_topic_score_codex":0.005949839,"about_ca_topic_score_gemma":0.0007565025,"teacher_disagreement_score":0.1314351,"about_ca_system_score_codex":0.00011787252,"about_ca_system_score_gemma":0.00010106395,"threshold_uncertainty_score":0.89944166},"labels":[],"label_agreement":null},{"id":"W1988517173","doi":"10.3201/eid1202.051133","title":"Human Metapneumovirus, Peru","year":2006,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Respiratory viral infections research","field":"Medicine","cited_by":164,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Centre hospitalier universitaire de Québec","funders":"National Institute of Allergy and Infectious Diseases; U.S. Department of Defense","keywords":"Human metapneumovirus; Metapneumovirus; Virology; Genotype; Medicine; Biology; Respiratory tract infections; Respiratory system; Internal medicine; Gene; Genetics","score_opus":0.02060236978327075,"score_gpt":0.34360310164592545,"score_spread":0.3230007318626547,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1988517173","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9392783,0.0008086309,0.00012088862,0.00020822782,0.00018281606,0.00036404651,0.000012873158,0.00069969555,0.058324486],"genre_scores_gemma":[0.9942706,0.000012637696,0.000019364743,0.0003341643,0.00067144557,0.0001042178,0.000038317554,0.00005207258,0.004497175],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9983846,0.00009702837,0.00031805373,0.00035964072,0.0004245824,0.00041608038],"domain_scores_gemma":[0.9990784,0.000036207926,0.00006750199,0.00044170945,0.00016409188,0.00021208635],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00012897264,0.00021000618,0.0002921231,0.00044414127,0.00047162452,0.000081418075,0.00008267304,0.000068686466,0.0014766047],"category_scores_gemma":[0.00013458767,0.0001934272,0.00023841254,0.00058735744,0.00014194284,0.0001876645,0.000060839004,0.000246862,0.00046392423],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000023573111,0.0009397061,0.9404725,0.00011784038,0.00013231502,0.00013749358,0.000017135542,0.0003147919,0.028436635,0.0041993507,0.023020636,0.0021880583],"study_design_scores_gemma":[0.0016312927,0.000507983,0.9136732,0.000053177373,0.00029106924,0.00010387948,0.0000268489,0.00013187327,0.0032806403,0.0015926536,0.07833484,0.00037250094],"about_ca_topic_score_codex":0.0009114979,"about_ca_topic_score_gemma":0.00009642188,"teacher_disagreement_score":0.055314206,"about_ca_system_score_codex":0.00017768753,"about_ca_system_score_gemma":0.000102350255,"threshold_uncertainty_score":0.9994362},"labels":[],"label_agreement":null},{"id":"W1988931322","doi":"10.3201/eid1508.081585","title":"Challenges of Investigating Community Outbreaks of Cyclosporiasis, British Columbia, Canada","year":2009,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Parasitic Infections and Diagnostics","field":"Immunology and Microbiology","cited_by":37,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Public Health Agency of Canada","funders":"","keywords":"Outbreak; Cyclospora; Environmental health; Geography; Medicine; Advertising; Virology; Business; Cryptosporidium; Biology; Ecology","score_opus":0.011475405969917406,"score_gpt":0.23761148880320207,"score_spread":0.22613608283328465,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1988931322","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9861624,0.0046069603,0.000017027507,0.000052970565,0.0005607484,0.00011541959,0.0001757832,0.00007066521,0.008238023],"genre_scores_gemma":[0.99939275,0.00028251085,0.000013468228,0.00011176406,0.000029613842,0.000007856385,0.00006558762,0.000009109786,0.000087356166],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9989832,0.0002365607,0.00036248565,0.00013386803,0.000052249336,0.00023161828],"domain_scores_gemma":[0.9988975,0.0003901578,0.00022805047,0.00027452217,0.00016615565,0.00004359821],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013699805,0.00010452635,0.00032726815,0.000044372875,0.00034517888,0.000013797336,0.00012467444,0.00009167862,0.00015807142],"category_scores_gemma":[0.00079000567,0.00016019998,0.00008470847,0.0001426835,0.00017792825,0.00005787154,0.000035591966,0.00023131518,0.0000028656302],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000063042185,0.0009074471,0.9588042,0.0001323958,0.0002209146,0.000008612776,0.00037499398,0.00016765381,0.0030440295,0.00081938924,0.008459277,0.027054785],"study_design_scores_gemma":[0.0006425721,0.00021632567,0.99402076,0.00018270077,0.00011664259,0.000056544635,0.00048524817,0.000002550001,0.0013464689,0.001566092,0.0011903152,0.00017376718],"about_ca_topic_score_codex":0.8902189,"about_ca_topic_score_gemma":0.9176336,"teacher_disagreement_score":0.035216577,"about_ca_system_score_codex":0.000061129445,"about_ca_system_score_gemma":0.0003321441,"threshold_uncertainty_score":0.6532766},"labels":[],"label_agreement":null},{"id":"W1991358666","doi":"10.3201/eid1506.090072","title":"Past, Present, and Possible Future Human Infection with Influenza Virus A Subtype H7","year":2009,"lang":"en","type":"review","venue":"Emerging infectious diseases","topic":"Influenza Virus Research Studies","field":"Medicine","cited_by":208,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Virus; Virology; Pneumonia; Disease; Isolation (microbiology); Influenza A virus; Human mortality from H5N1; Influenza A virus subtype H5N1; Biology; Virus isolation; Immunology; Pathogenesis; Transmission and infection of H5N1; Medicine; Infectious disease (medical specialty); Coronavirus disease 2019 (COVID-19); Avian influenza virus; Microbiology; Internal medicine","score_opus":0.05742457648806033,"score_gpt":0.40352732732324015,"score_spread":0.34610275083517983,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1991358666","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0025908393,0.9911652,0.000007806328,0.00007798749,0.00020665975,0.0020968374,0.000095457486,0.0006464453,0.0031127695],"genre_scores_gemma":[0.00021951064,0.9936947,0.000020759575,0.00028531373,0.004492945,0.0004408761,0.00015568727,0.00015962213,0.00053058943],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99646294,0.00030978312,0.000713576,0.00092324644,0.00074960134,0.0008408327],"domain_scores_gemma":[0.99776804,0.0001351205,0.00046154007,0.000747804,0.00035671642,0.0005307867],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00021585592,0.00095964,0.00219045,0.0009782813,0.0008216292,0.00019027664,0.00014290134,0.00035747915,0.00014235887],"category_scores_gemma":[0.00011193719,0.0007002587,0.0005123234,0.0011168438,0.0002989762,0.0002923407,0.00020523429,0.0009948983,0.00008064155],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000215592,0.00096069457,0.05734369,0.034449875,0.0026474316,0.00031946079,0.00020661656,0.00001686113,0.0000039958873,0.0001619458,0.01696424,0.8867096],"study_design_scores_gemma":[0.001382939,0.0010957341,0.016880235,0.008199082,0.0034462663,0.00024890987,0.00001585145,0.0000025074708,0.0000014728291,0.000062441584,0.96797645,0.00068812945],"about_ca_topic_score_codex":0.00054396904,"about_ca_topic_score_gemma":0.000115060444,"teacher_disagreement_score":0.9510122,"about_ca_system_score_codex":0.00038385682,"about_ca_system_score_gemma":0.0004782171,"threshold_uncertainty_score":0.99954486},"labels":[],"label_agreement":null},{"id":"W1991459051","doi":"10.3201/eid2004.130564","title":"Spread of Virulent Group A<i>Streptococcus</i>Type<i>emm59</i>from Montana to Wyoming, USA","year":2014,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Streptococcal Infections and Treatments","field":"Medicine","cited_by":16,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of Toronto","funders":"Houston Methodist Research Institute; Houston Methodist Hospital; Fondren Foundation","keywords":"Phylogenetic tree; Virulence; Streptococcus; Whole genome sequencing; Biology; Genome; clone (Java method); Strain (injury); Phylogenetics; Microbiology; Genetics; Gene; Bacteria","score_opus":0.010997538695647761,"score_gpt":0.2810527106920532,"score_spread":0.27005517199640544,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1991459051","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9903699,0.0002548389,0.0009104131,0.00010801967,0.00064760045,0.00080021285,0.00007943047,0.00024149829,0.0065880413],"genre_scores_gemma":[0.9982797,0.000043637447,0.00018948066,0.00046309218,0.00036054023,0.00018149149,0.00010660739,0.000048693855,0.00032674926],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99832577,0.000060522256,0.00043043552,0.00050664955,0.0003058603,0.00037079232],"domain_scores_gemma":[0.9984615,0.00014926227,0.00015648079,0.0006184481,0.00015770258,0.00045659626],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00007093016,0.00031488514,0.00051034725,0.00025681223,0.00016586191,0.00003007154,0.00009587373,0.000081370614,0.0010814293],"category_scores_gemma":[0.0002693483,0.00028242575,0.00028046535,0.00050127844,0.00007535038,0.00011188405,0.00008710383,0.0001278059,0.00030788183],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010790723,0.001147712,0.97772056,0.000052699863,0.00033853608,0.000016812797,0.00008795656,0.00015546997,0.0043226113,0.00031597563,0.0027718397,0.01296194],"study_design_scores_gemma":[0.0024974048,0.0015109734,0.9614578,0.00029765844,0.0007529585,0.000013174033,0.000037346043,0.00024806496,0.0048564677,0.00046329445,0.027511029,0.0003538665],"about_ca_topic_score_codex":0.0032072472,"about_ca_topic_score_gemma":0.00047428304,"teacher_disagreement_score":0.02473919,"about_ca_system_score_codex":0.00014539003,"about_ca_system_score_gemma":0.000055967343,"threshold_uncertainty_score":0.9999628},"labels":[],"label_agreement":null},{"id":"W1991917978","doi":"10.3201/eid2002.121263","title":"NDM-1–producing Strains, Family<i>Enterobacteriaceae,</i>in Hospital, Beijing, China","year":2014,"lang":"en","type":"letter","venue":"Emerging infectious diseases","topic":"Antibiotic Resistance in Bacteria","field":"Biochemistry, Genetics and Molecular Biology","cited_by":46,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Multilocus sequence typing; Microbiology; Biology; Klebsiella pneumoniae; Pulsed-field gel electrophoresis; Plasmid; Enterobacteriaceae; Typing; Escherichia coli; Genotype; Genetics; Gene","score_opus":0.004932711722752476,"score_gpt":0.22928529313276674,"score_spread":0.22435258141001427,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1991917978","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97303957,0.0015083081,0.00039821767,0.019426156,0.0030044785,0.00063853344,0.0001982184,0.00017830337,0.0016082294],"genre_scores_gemma":[0.9028002,0.0009995393,0.00010804947,0.080379196,0.009883031,0.00007622011,0.0037114108,0.00031659726,0.0017257474],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9964566,0.00024679484,0.0006423761,0.0014187467,0.0003379093,0.0008975617],"domain_scores_gemma":[0.99808276,0.000020510717,0.00044085007,0.0012424825,0.00008570916,0.00012769336],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00017286323,0.0007712081,0.0006719489,0.00023387287,0.00018090208,0.00019018039,0.0005381826,0.00073786004,0.000095918316],"category_scores_gemma":[0.00025212418,0.0008252165,0.00039018693,0.00018133681,0.00019240691,0.000016442878,0.00024099309,0.00077225256,0.000049422684],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000020298354,0.00019586139,0.17723966,0.00042852043,0.00019783918,0.0001440035,0.000054950557,0.00007433448,0.0047597014,0.0000044811213,0.81649417,0.000386169],"study_design_scores_gemma":[0.0008740737,0.000470144,0.22096208,0.0005851925,0.00016236439,0.000028091086,0.000025975272,0.000014366549,0.0002578196,0.00006941354,0.7751566,0.0013938711],"about_ca_topic_score_codex":0.00015195688,"about_ca_topic_score_gemma":0.00005152232,"teacher_disagreement_score":0.07023934,"about_ca_system_score_codex":0.000114525246,"about_ca_system_score_gemma":0.00015709283,"threshold_uncertainty_score":0.99941987},"labels":[],"label_agreement":null},{"id":"W1992264242","doi":"10.3201/eid1809.120122","title":"<i>Entamoeba bangladeshi</i>nov. sp., Bangladesh","year":2012,"lang":"en","type":"letter","venue":"Emerging infectious diseases","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":80,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia; BC Centre for Disease Control; Interior Health","funders":"National Institute of Allergy and Infectious Diseases","keywords":"Entamoeba; Microbiology; Entamoeba histolytica; Biology; Medicine","score_opus":0.011875054939639565,"score_gpt":0.26184531759863977,"score_spread":0.24997026265900021,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1992264242","genre_codex":"commentary","genre_gemma":"commentary","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"commentary","genre_consensus":"commentary","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.097125165,0.023912929,0.0008403235,0.506264,0.025547758,0.00762051,0.002438114,0.008800451,0.32745078],"genre_scores_gemma":[0.44398585,0.0003903418,0.000114437134,0.50376403,0.022858074,0.0007424433,0.0062563163,0.00057649903,0.021311998],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9965066,0.00013938533,0.00058813696,0.00082045514,0.0007345936,0.0012108522],"domain_scores_gemma":[0.997798,0.00016501918,0.00033753927,0.0010389014,0.00021853374,0.00044197563],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.000097408774,0.0009085452,0.0010149796,0.0006654353,0.0004934391,0.00010203831,0.00016870187,0.0008487784,0.0060533104],"category_scores_gemma":[0.00011733538,0.00081810215,0.0008982553,0.0005673959,0.00019875728,0.00026317348,0.00013304013,0.0017611535,0.0020625682],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000017469492,0.0006203053,0.23573622,0.00042731638,0.0009428694,0.00092600094,0.00005194866,0.0000030935248,0.0000061175733,0.000035784502,0.7590263,0.002206613],"study_design_scores_gemma":[0.0019589297,0.0003040987,0.029541664,0.0003761935,0.0033679954,0.0005831193,0.000018869405,0.00001123649,0.000034587112,0.00019494019,0.9628288,0.00077954354],"about_ca_topic_score_codex":0.0003548564,"about_ca_topic_score_gemma":0.0000127477,"teacher_disagreement_score":0.34686068,"about_ca_system_score_codex":0.00063215004,"about_ca_system_score_gemma":0.00029070769,"threshold_uncertainty_score":0.99942696},"labels":[],"label_agreement":null},{"id":"W1993672395","doi":"10.3201/eid1206.060115","title":"Epidemic<i>Clostridium difficile</i>Strain in Hospital Visitation Dog","year":2006,"lang":"en","type":"letter","venue":"Emerging infectious diseases","topic":"Clostridium difficile and Clostridium perfringens research","field":"Medicine","cited_by":55,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of Guelph","funders":"","keywords":"Clostridium difficile; Clostridium difficile toxin A; Ribotyping; Clostridium difficile toxin B; Microbiology; Outbreak; Pore-forming toxin; Toxin; Biology; Polymerase chain reaction; Virulence; Gene; Strain (injury); Virology; Medicine; Genetics; Microbial toxins","score_opus":0.010301424759389829,"score_gpt":0.2835988195829498,"score_spread":0.27329739482355997,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1993672395","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.54056984,0.0038904143,0.000076720135,0.4381988,0.0021469845,0.0029583,0.0018775356,0.0010991881,0.009182188],"genre_scores_gemma":[0.8342922,0.00090319145,0.00006584256,0.12085356,0.018199695,0.00082632195,0.016319724,0.0006958065,0.007843659],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.993744,0.00031370774,0.0013033531,0.001459351,0.0015153659,0.0016642242],"domain_scores_gemma":[0.9972192,0.00060416956,0.000425029,0.0010331742,0.000365391,0.0003530355],"candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.00028535572,0.0010530698,0.0014735117,0.0014436377,0.00024867404,0.00016401616,0.00035774888,0.0011806792,0.00086890964],"category_scores_gemma":[0.0007889414,0.001081962,0.0008582725,0.0013034067,0.00026047532,0.000192103,0.00018808247,0.0035997748,0.00043803116],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000053266067,0.0012081945,0.02249056,0.001003667,0.0002157744,0.003272744,0.00008107074,0.00017809644,0.0009336557,0.000014116473,0.96839064,0.0021582006],"study_design_scores_gemma":[0.008920506,0.0025026735,0.038103536,0.0024865502,0.0016805826,0.00026804293,0.00018573209,0.0008252754,0.0035421834,0.0008724883,0.93708414,0.003528289],"about_ca_topic_score_codex":0.001137899,"about_ca_topic_score_gemma":0.00006345053,"teacher_disagreement_score":0.31734523,"about_ca_system_score_codex":0.0013843856,"about_ca_system_score_gemma":0.00079058233,"threshold_uncertainty_score":0.99916303},"labels":[],"label_agreement":null},{"id":"W1994375280","doi":"10.3201/eid1106.041146","title":"Community-associated Methicillin-resistant<i>Staphylococcus aureus</i>, Canada","year":2005,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Antimicrobial Resistance in Staphylococcus","field":"Medicine","cited_by":135,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Saskatchewan Health; BC Centre for Disease Control; Health Canada","funders":"","keywords":"Mupirocin; Methicillin-resistant Staphylococcus aureus; Staphylococcus aureus; Pulsed-field gel electrophoresis; Microbiology; Subtyping; Multilocus sequence typing; Panton–Valentine leukocidin; Cluster (spacecraft); Multiple drug resistance; Staphylococcal infections; Medicine; Biology; Drug resistance; Genotype; Gene; Bacteria; Genetics","score_opus":0.012529643041304824,"score_gpt":0.26827733213859467,"score_spread":0.25574768909728984,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1994375280","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98328364,0.0016044829,0.00016744414,0.0027935568,0.0004384768,0.00055675354,0.00030510532,0.0006341663,0.01021635],"genre_scores_gemma":[0.99271,0.000106332394,0.000105513616,0.004773479,0.00038328313,0.000052192987,0.00016438171,0.00009383694,0.001611007],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99713534,0.0003901127,0.0006050831,0.0003940388,0.0006893557,0.0007860489],"domain_scores_gemma":[0.9975404,0.0004343845,0.00027095593,0.00080819393,0.00043893716,0.0005071071],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00035126327,0.00044729482,0.0006681852,0.00021918151,0.00094203185,0.00006298412,0.00028235637,0.00016296584,0.0004558967],"category_scores_gemma":[0.0014711439,0.00044881663,0.00029749642,0.0007397529,0.00021398852,0.00015523862,0.00012018935,0.000987425,0.00005215314],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00092100777,0.004020655,0.3930241,0.0007821818,0.002024719,0.00047259135,0.0012696665,0.003204057,0.095051415,0.0010024466,0.48779067,0.010436498],"study_design_scores_gemma":[0.007196711,0.00066335034,0.41002414,0.001024702,0.0017495317,0.000014272504,0.0012613827,0.00059686747,0.011820262,0.0005803009,0.5630255,0.0020430079],"about_ca_topic_score_codex":0.25355616,"about_ca_topic_score_gemma":0.6757995,"teacher_disagreement_score":0.42224336,"about_ca_system_score_codex":0.0013284484,"about_ca_system_score_gemma":0.0014811737,"threshold_uncertainty_score":0.99979633},"labels":[],"label_agreement":null},{"id":"W1995387924","doi":"10.3201/eid1212.060725","title":"Methicillin-resistant<i>Staphylococcus aureus</i>in Cat and Owner","year":2006,"lang":"en","type":"letter","venue":"Emerging infectious diseases","topic":"Antimicrobial Resistance in Staphylococcus","field":"Medicine","cited_by":40,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"","keywords":"Staphylococcus aureus; Methicillin-resistant Staphylococcus aureus; Microbiology; Staphylococcal infections; Medicine; Virology; Biology; Bacteria; Genetics","score_opus":0.010666182999131774,"score_gpt":0.2642201717084271,"score_spread":0.25355398870929535,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1995387924","genre_codex":"commentary","genre_gemma":"commentary","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"commentary","genre_consensus":"commentary","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.4640336,0.02023429,0.00044977557,0.4837125,0.0030816055,0.0049755317,0.0020099422,0.0020784829,0.019424293],"genre_scores_gemma":[0.32168713,0.0015616863,0.0004934108,0.64091367,0.009287254,0.000573893,0.0023948664,0.00085493654,0.022233156],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9955445,0.00024150046,0.0009390701,0.0012986808,0.0008051766,0.0011710849],"domain_scores_gemma":[0.9976221,0.00048274442,0.0004191354,0.0009550121,0.0002650754,0.00025596132],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00022460069,0.0009837939,0.0014676517,0.0010261005,0.00026464555,0.00013901925,0.00024116739,0.0011048804,0.00027458454],"category_scores_gemma":[0.00036283978,0.0007991377,0.0005196214,0.0007534654,0.0005203573,0.00013920937,0.00015171264,0.002056142,0.00007823412],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011013161,0.00022426526,0.06345242,0.0016440345,0.0002396698,0.0029948654,0.0000796555,0.000053818323,0.0032101143,0.000027905444,0.9272003,0.0007627991],"study_design_scores_gemma":[0.0021843126,0.0002035082,0.042475455,0.0014082543,0.0010819347,0.00001630648,0.000033804547,0.00004461232,0.00027634922,0.0008750154,0.9501192,0.0012812198],"about_ca_topic_score_codex":0.0016768476,"about_ca_topic_score_gemma":0.0006409105,"teacher_disagreement_score":0.15720119,"about_ca_system_score_codex":0.0005526696,"about_ca_system_score_gemma":0.00049903366,"threshold_uncertainty_score":0.999446},"labels":[],"label_agreement":null},{"id":"W1996206707","doi":"10.3201/eid1505.081536","title":"<i>Klebsiella pneumoniae</i>Carbapenemase, Canada","year":2009,"lang":"en","type":"letter","venue":"Emerging infectious diseases","topic":"Antibiotic Resistance in Bacteria","field":"Biochemistry, Genetics and Molecular Biology","cited_by":37,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of Toronto","funders":"","keywords":"Klebsiella pneumoniae; Citrobacter freundii; Klebsiella oxytoca; Microbiology; Biology; Infection control; Carbapenem; Pseudomonas aeruginosa; Tigecycline; Medicine; Antimicrobial; Antibiotics; Intensive care medicine; Escherichia coli; Bacteria; Gene","score_opus":0.0036170838952281634,"score_gpt":0.20982817967306697,"score_spread":0.2062110957778388,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1996206707","genre_codex":"empirical","genre_gemma":"commentary","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"commentary","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.58596957,0.015790926,0.0003716945,0.33281532,0.011970676,0.0021687641,0.0022619853,0.0006899853,0.04796108],"genre_scores_gemma":[0.34544173,0.0009326316,0.000039176943,0.62347186,0.0120392395,0.000038841754,0.0045845523,0.00024290395,0.013209057],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9975198,0.00012663484,0.000401326,0.00084410026,0.00042170275,0.0006864714],"domain_scores_gemma":[0.99849254,0.000034059773,0.0002782437,0.00091622176,0.00012962769,0.00014933024],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.000049300746,0.000583813,0.00045359155,0.00007749276,0.00020294999,0.00009404488,0.00042689592,0.00055598095,0.0001431152],"category_scores_gemma":[0.00014242684,0.00061662437,0.0002638367,0.0001419941,0.000093396055,0.00000480196,0.000120130906,0.0005550629,0.000023431918],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000011212843,0.00003316949,0.020238666,0.000113351285,0.00015096022,0.00033529982,0.000002561732,0.000049144564,0.0016019996,0.000002992772,0.97697896,0.00048169645],"study_design_scores_gemma":[0.00024781172,0.00010611068,0.0060904254,0.00008564838,0.00015184924,0.00005714597,0.000006102401,0.00000390846,0.0005960094,0.00005326556,0.991872,0.00072968454],"about_ca_topic_score_codex":0.027763207,"about_ca_topic_score_gemma":0.08556674,"teacher_disagreement_score":0.29065654,"about_ca_system_score_codex":0.00015127096,"about_ca_system_score_gemma":0.0010959324,"threshold_uncertainty_score":0.9996285},"labels":[],"label_agreement":null},{"id":"W1997855554","doi":"10.3201/eid1609.100476","title":"Rhinovirus Outbreaks in Long-term Care Facilities, Ontario, Canada","year":2010,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Respiratory viral infections research","field":"Medicine","cited_by":49,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Public Health Agency of Canada","funders":"Centre Hospitalier Universitaire de Québec","keywords":"Rhinovirus; Outbreak; Medicine; Virology; Intensive care medicine; Coronavirus disease 2019 (COVID-19); Environmental health; Disease; Infectious disease (medical specialty); Virus; Pathology","score_opus":0.012131993989102629,"score_gpt":0.2957167850746475,"score_spread":0.28358479108554485,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1997855554","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9832089,0.00048363418,0.000010973455,0.000079984995,0.0009112927,0.00051586435,0.00006998292,0.00017048523,0.014548904],"genre_scores_gemma":[0.9959499,0.000013609683,0.0000059821605,0.0002452307,0.00022176864,0.0001199275,0.00009638068,0.000036316946,0.0033108867],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99811697,0.000059326518,0.0003583431,0.00041446066,0.00050946284,0.0005414151],"domain_scores_gemma":[0.99871606,0.00006499023,0.000058760957,0.00055057945,0.00020885147,0.0004007882],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00008408513,0.00025484656,0.00033471957,0.0003689538,0.00022774575,0.000065657965,0.00012794159,0.00010875899,0.00396072],"category_scores_gemma":[0.00028604397,0.000250637,0.00011657482,0.0003906355,0.00011846013,0.00017667812,0.00008379387,0.0008637875,0.000056271183],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00005028386,0.00017846214,0.98990554,0.0002134343,0.000048229973,0.00033454064,0.0004483304,0.0000523362,0.0007519805,0.000050092785,0.0016956411,0.0062711583],"study_design_scores_gemma":[0.001204851,0.0001461901,0.96678567,0.00006121589,0.00004405733,0.000060279806,0.00016614188,0.000009535069,0.00047086345,0.000016888847,0.030782508,0.000251777],"about_ca_topic_score_codex":0.9694081,"about_ca_topic_score_gemma":0.998512,"teacher_disagreement_score":0.029103957,"about_ca_system_score_codex":0.0014071265,"about_ca_system_score_gemma":0.0035384933,"threshold_uncertainty_score":0.9999946},"labels":[],"label_agreement":null},{"id":"W1998207854","doi":"10.3201/eid1104.041304","title":"SARS Coronaviruses and Highly Pathogenic Influenza Viruses: Safety and Occupational Health for Laboratory Workers","year":2005,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Medical Device Sterilization and Disinfection","field":"Immunology and Microbiology","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Personal protective equipment; Pandemic; Medicine; Virology; Transmission (telecommunications); Environmental health; Medical emergency; Infectious disease (medical specialty); Disease; Coronavirus disease 2019 (COVID-19); Pathology","score_opus":0.01921238168643045,"score_gpt":0.31448609252471593,"score_spread":0.29527371083828546,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1998207854","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98012996,0.013794137,0.0034705454,0.0004515337,0.0006906887,0.0004988316,0.00052598346,0.00029227138,0.00014605532],"genre_scores_gemma":[0.99153614,0.00063603115,0.000056408462,0.007303405,0.000109963,0.000055759912,0.00020165317,0.000021512787,0.000079114536],"study_design_codex":"observational","study_design_gemma":"not_applicable","domain_scores_codex":[0.9989037,0.00014473696,0.00032800928,0.0002967228,0.000047109548,0.00027974608],"domain_scores_gemma":[0.9993765,0.00018099685,0.00014378809,0.000118053744,0.000082859035,0.00009785519],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00017859285,0.00016872777,0.00022828796,0.00011627456,0.0005116983,0.00003059215,0.000040649877,0.000103404534,0.00022317751],"category_scores_gemma":[0.00025849458,0.00016271001,0.00005148965,0.00014629678,0.00017883953,0.0001942263,0.0000417702,0.00009104447,0.000037763806],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0008763936,0.00030574063,0.9147034,0.00020432321,0.000226295,7.7617625e-7,0.0005316585,0.00016118315,0.0038922129,0.002329503,0.009880111,0.06688835],"study_design_scores_gemma":[0.0032575906,0.00022712613,0.4960216,0.00007681198,0.00008196348,0.000016195747,0.00016216555,0.000055009885,0.00023321484,0.00010604212,0.49948403,0.00027826306],"about_ca_topic_score_codex":0.00008876171,"about_ca_topic_score_gemma":0.00015040174,"teacher_disagreement_score":0.4896039,"about_ca_system_score_codex":0.00006767645,"about_ca_system_score_gemma":0.00017399283,"threshold_uncertainty_score":0.6635122},"labels":[],"label_agreement":null},{"id":"W1998217335","doi":"10.3201/eid2005.130966","title":"<i>Shigella</i>spp. with Reduced Azithromycin Susceptibility, Quebec, Canada, 2012–2013","year":2014,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Escherichia coli research studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":51,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"Université de Montréal","keywords":"Azithromycin; Shigella; Men who have sex with men; Transmission (telecommunications); Human immunodeficiency virus (HIV); Microbiology; Biology; Medicine; Virology; Antibiotics; Salmonella; Bacteria; Genetics","score_opus":0.004567502975593164,"score_gpt":0.23108546256544044,"score_spread":0.22651795958984727,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1998217335","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9927308,0.0014827377,0.00028396974,0.0008573032,0.00023497613,0.00029026365,0.000024868503,0.00007745701,0.004017628],"genre_scores_gemma":[0.9950998,0.0002193535,0.000045682307,0.00039884128,0.00043977372,0.00007924087,0.000079537785,0.000045888017,0.003591918],"study_design_codex":"observational","study_design_gemma":"not_applicable","domain_scores_codex":[0.99819803,0.00018207745,0.00020026232,0.0005484808,0.00034343303,0.00052769115],"domain_scores_gemma":[0.99879754,0.00005158919,0.00008916262,0.00057734124,0.00021708754,0.0002672569],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013837531,0.00027847686,0.0002453349,0.00004656652,0.00030003744,0.000051731095,0.00021331116,0.000068448426,0.000137196],"category_scores_gemma":[0.00030892287,0.00024021065,0.00008430299,0.0001907367,0.00018623662,0.000011522252,0.0001960201,0.00013856479,0.000016461552],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00021321989,0.00041151876,0.452406,0.00021923624,0.00052603596,0.000016604643,0.000073053285,0.0014080304,0.120505475,0.000113633025,0.42188752,0.002219677],"study_design_scores_gemma":[0.0026784323,0.0011624807,0.43675402,0.00011425483,0.00021815681,0.00002305107,0.00028701554,0.00029215403,0.02691984,0.00017710158,0.5297665,0.0016069832],"about_ca_topic_score_codex":0.35468075,"about_ca_topic_score_gemma":0.95851326,"teacher_disagreement_score":0.60383254,"about_ca_system_score_codex":0.000103506696,"about_ca_system_score_gemma":0.00067132927,"threshold_uncertainty_score":0.9795506},"labels":[],"label_agreement":null},{"id":"W1998660777","doi":"10.3201/eid2003.130139","title":"<i>Staphylococcus delphini</i>and Methicillin-Resistant<i>S. pseudintermedius</i>in Horses, Canada","year":2014,"lang":"en","type":"letter","venue":"Emerging infectious diseases","topic":"Antimicrobial Resistance in Staphylococcus","field":"Medicine","cited_by":21,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of Guelph","funders":"National Natural Science Foundation of China","keywords":"Staphylococcus pseudintermedius; Microbiology; Biology; Broth microdilution; Pulsed-field gel electrophoresis; Coagulase; Veterinary medicine; Methicillin-resistant Staphylococcus aureus; Staphylococcus aureus; Staphylococcus; Antimicrobial; Medicine; Minimum inhibitory concentration; Genotype; Genetics; Bacteria","score_opus":0.011142671181988736,"score_gpt":0.25571731476750453,"score_spread":0.24457464358551578,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1998660777","genre_codex":"commentary","genre_gemma":"commentary","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"commentary","genre_consensus":"commentary","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.21592501,0.019724464,0.00043362722,0.73867035,0.005431945,0.004185778,0.0018594033,0.0012374847,0.012531947],"genre_scores_gemma":[0.44807795,0.0009850832,0.00006589637,0.5446863,0.0037162104,0.00018557989,0.0005688741,0.00029885655,0.0014152488],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99468374,0.00031049305,0.0011406909,0.0013952294,0.001111247,0.0013586032],"domain_scores_gemma":[0.99676085,0.0008414375,0.00054743077,0.001060098,0.00032660077,0.00046358924],"candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.00029022392,0.0011030909,0.0017990123,0.00068886764,0.00028219924,0.000117207506,0.0003601206,0.0008622247,0.00022588024],"category_scores_gemma":[0.00096786895,0.0010881624,0.00043016468,0.0006114315,0.00049208215,0.000109212786,0.0001811693,0.0030245907,0.000024016681],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00016338179,0.00009600918,0.023311589,0.00185782,0.00031597196,0.003762521,0.00006227342,0.000028719998,0.00056319044,0.00002581741,0.9692351,0.0005776043],"study_design_scores_gemma":[0.0018422486,0.0001930638,0.008324504,0.001793757,0.0007979152,0.00007003645,0.000043288932,0.00005364867,0.00017416428,0.00021813567,0.9853198,0.0011694714],"about_ca_topic_score_codex":0.21220897,"about_ca_topic_score_gemma":0.28761008,"teacher_disagreement_score":0.23215294,"about_ca_system_score_codex":0.0010253382,"about_ca_system_score_gemma":0.0021252967,"threshold_uncertainty_score":0.99927545},"labels":[],"label_agreement":null},{"id":"W1999512092","doi":"10.3201/eid1004.030416","title":"Human Case of Lobomycosis","year":2004,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Infectious Diseases and Mycology","field":"Veterinary","cited_by":62,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Alberta Health Services; Calgary Laboratory Services; University of Calgary","funders":"Calgary Laboratory Services; University of Calgary","keywords":"Medicine; Geography; Biology","score_opus":0.020080917768491784,"score_gpt":0.32723035414375606,"score_spread":0.30714943637526426,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1999512092","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98764956,0.00041148605,0.00028178134,0.00004749988,0.0004731382,0.00026380722,0.00010188935,0.00045895486,0.010311882],"genre_scores_gemma":[0.9993246,0.000018546372,0.000029089615,0.00018719888,0.00023314836,0.00007549575,0.0000243043,0.00004830677,0.000059309066],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99865484,0.000078314006,0.000380582,0.0003494583,0.00013947194,0.00039732363],"domain_scores_gemma":[0.9990212,0.00004633563,0.00018308949,0.00041270402,0.00013133249,0.00020534612],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00007363493,0.0002432455,0.0003273787,0.00025819064,0.0004043817,0.00002576121,0.00011395925,0.00008922687,0.0011987354],"category_scores_gemma":[0.00009272967,0.00025101166,0.0003140195,0.00032858588,0.00014142388,0.00016084407,0.0000990142,0.0001231023,0.00012310898],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005749665,0.012696832,0.69969565,0.0017905647,0.0021891166,0.048614107,0.0029288868,0.01348152,0.023347365,0.1716908,0.0114082415,0.011581928],"study_design_scores_gemma":[0.029336872,0.020257805,0.67007184,0.00090980413,0.0054121288,0.08962993,0.0032482943,0.0003165671,0.0043445574,0.15177052,0.018455988,0.0062456676],"about_ca_topic_score_codex":0.0030391992,"about_ca_topic_score_gemma":0.00027266797,"teacher_disagreement_score":0.041015826,"about_ca_system_score_codex":0.00015067066,"about_ca_system_score_gemma":0.00009353841,"threshold_uncertainty_score":0.9999942},"labels":[],"label_agreement":null},{"id":"W2000886945","doi":"10.3201/eid1801.110533","title":"Intestinal Toxemia Botulism in 3 Adults, Ontario, Canada, 2006–2008","year":2012,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Botulinum Toxin and Related Neurological Disorders","field":"Medicine","cited_by":53,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Regional Municipality of Niagara; Humber River Regional Hospital; Health Sciences Centre; Regional Municipality of Durham; McMaster University Medical Centre; The Scarborough Hospital; Toronto Public Health; Public Health Agency of Canada; Sunnybrook Health Science Centre; Health Canada; Ministry of Health and Long Term Care","funders":"University of Guelph; Bristol-Myers Squibb","keywords":"Botulism; Clostridium botulinum; Antitoxin; Medicine; Feces; Botulinum toxin; Gastroenterology; Pediatrics; Internal medicine; Surgery; Microbiology; Toxin; Biology","score_opus":0.006145201189240613,"score_gpt":0.221751356872705,"score_spread":0.2156061556834644,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2000886945","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9847729,0.0020811611,0.000015678885,0.000998267,0.0007038412,0.00025936836,0.000009345697,0.00015921632,0.011000189],"genre_scores_gemma":[0.99611104,0.00011179097,0.000022162414,0.0023773743,0.00019018147,0.000031270363,0.000036282367,0.000025062825,0.001094856],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99856186,0.000052571733,0.0002878085,0.00025762574,0.00025209042,0.0005880596],"domain_scores_gemma":[0.9991775,0.00008046641,0.000065766166,0.0001994197,0.000043041433,0.00043376486],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.000058226724,0.00021781847,0.0002784518,0.000114423245,0.000101313824,0.000009283188,0.00007024046,0.000107098764,0.0014645212],"category_scores_gemma":[0.00024115093,0.0001841094,0.00010306159,0.00029874512,0.00006758115,0.00010308135,0.000043889548,0.0005258531,0.000042812382],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001501871,0.00051584904,0.9744443,0.000050523195,0.000034566536,0.00014088627,0.00019481739,0.00011946408,0.000029912584,0.00006179367,0.022683488,0.0015741802],"study_design_scores_gemma":[0.0016978773,0.00017848972,0.9746311,0.0001560493,0.00008942109,0.00013081351,0.00006757913,0.00010060076,0.000023304348,0.00007794253,0.022617428,0.0002294001],"about_ca_topic_score_codex":0.74326926,"about_ca_topic_score_gemma":0.8230694,"teacher_disagreement_score":0.079800114,"about_ca_system_score_codex":0.00036928843,"about_ca_system_score_gemma":0.0005181773,"threshold_uncertainty_score":0.9994483},"labels":[],"label_agreement":null},{"id":"W2002581541","doi":"10.3201/eid1906.121351","title":"Ciprofloxacin-Resistant<i>Salmonella enterica</i>Serovar Kentucky in Canada","year":2013,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Salmonella and Campylobacter epidemiology","field":"Agricultural and Biological Sciences","cited_by":40,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Public Health Agency of Canada","funders":"","keywords":"Ciprofloxacin; Salmonella enterica; Serotype; Salmonella; Microbiology; Multilocus sequence typing; Biology; Virology; Antibiotics; Bacteria; Genotype; Genetics; Gene","score_opus":0.006855018079194973,"score_gpt":0.18881992814837878,"score_spread":0.1819649100691838,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2002581541","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9955563,0.00062788196,0.0000016234709,0.00092709315,0.00042684717,0.0002661167,0.00003609857,0.0001150506,0.002043],"genre_scores_gemma":[0.99811035,0.00012741315,0.0000055834157,0.0012258461,0.00020995052,0.00010206454,0.000057972244,0.0000027028923,0.00015813942],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99824977,0.00018766611,0.00038722486,0.0004210566,0.00018744636,0.0005668158],"domain_scores_gemma":[0.9991979,0.0002850319,0.00012222954,0.00010727255,0.00005712265,0.0002304427],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00008913532,0.00022718206,0.00031962316,0.000025604988,0.00015119983,0.00004344925,0.00023145138,0.000057037283,0.0019727964],"category_scores_gemma":[0.00012363192,0.00010539637,0.00010305675,0.0004279682,0.0000408628,0.00013624204,0.000085626656,0.00013464692,0.0001267129],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000015186565,0.00008599669,0.95788616,0.000009378185,0.000017195127,0.00002043195,0.000017539409,0.000038391318,0.019705094,0.000034798697,0.009102439,0.0130673945],"study_design_scores_gemma":[0.0001718252,0.00008008693,0.9879012,0.000022029877,0.000012723767,0.0000045945053,0.00023322967,0.00010450278,0.0001681378,0.0006265175,0.010408518,0.00026665127],"about_ca_topic_score_codex":0.88652194,"about_ca_topic_score_gemma":0.7948532,"teacher_disagreement_score":0.09166872,"about_ca_system_score_codex":0.00024933042,"about_ca_system_score_gemma":0.00007635051,"threshold_uncertainty_score":0.9989395},"labels":[],"label_agreement":null},{"id":"W2005371523","doi":"10.3201/eid1308.070329","title":"Ecoregional Dominance in Spatial Distribution of Avian Influenza (H5N1) Outbreaks","year":2007,"lang":"en","type":"letter","venue":"Emerging infectious diseases","topic":"Viral Infections and Vectors","field":"Medicine","cited_by":14,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"","keywords":"Influenza A virus subtype H5N1; Outbreak; Dominance (genetics); Geography; Virology; Biology; Veterinary medicine; Zoology; Medicine; Genetics; Virus","score_opus":0.015115316446921219,"score_gpt":0.29126108841704257,"score_spread":0.27614577197012136,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2005371523","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9437326,0.0015278659,0.0027418614,0.041163135,0.0034726518,0.0017373335,0.0014054341,0.0005617377,0.0036573338],"genre_scores_gemma":[0.9305844,0.00009607939,0.00001081205,0.063486524,0.003500491,0.00007421531,0.0018098278,0.00008270888,0.00035500093],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9976085,0.00008494485,0.00077472266,0.0005161551,0.0004677515,0.00054797024],"domain_scores_gemma":[0.9987195,0.00012368201,0.00040669023,0.00045001495,0.00016631844,0.00013375739],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00014630501,0.0004486375,0.0007726269,0.0006021069,0.000118889744,0.000023747369,0.00010745372,0.0005965823,0.0002545746],"category_scores_gemma":[0.0002615174,0.00043784193,0.00045463096,0.0006052703,0.00022200635,0.00012257516,0.000059533657,0.001224272,0.000042370975],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00018240235,0.0005558798,0.6865033,0.0007385083,0.00015262638,0.0005216626,0.00006756322,0.00010898764,0.00003116851,0.00004534706,0.3045233,0.00656926],"study_design_scores_gemma":[0.0019468862,0.00039491954,0.6212917,0.00080883043,0.00040302277,0.00011575289,0.000011390854,0.000112860274,0.00007874294,0.00016057641,0.37418914,0.00048617795],"about_ca_topic_score_codex":0.0030560568,"about_ca_topic_score_gemma":0.00038712646,"teacher_disagreement_score":0.06966585,"about_ca_system_score_codex":0.0004576763,"about_ca_system_score_gemma":0.00025985294,"threshold_uncertainty_score":0.99980736},"labels":[],"label_agreement":null},{"id":"W2006159814","doi":"10.3201/eid1212.060514","title":"Isolation of Lagos Bat Virus from Water Mongoose","year":2006,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Rabies epidemiology and control","field":"Immunology and Microbiology","cited_by":87,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canadian Food Inspection Agency","funders":"University of Pretoria; National Research Foundation","keywords":"Mongoose; Biology; Rabies; Virology; Rabies virus; Molecular epidemiology; Virus; Phylogenetic tree; Genotype; Zoology; Lyssavirus; Genetics; Rhabdoviridae","score_opus":0.004438799869049186,"score_gpt":0.21423661851754178,"score_spread":0.2097978186484926,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2006159814","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9915813,0.0034618005,0.0015874151,0.00016415058,0.0007768947,0.0001287762,0.00010463394,0.000177158,0.0020178428],"genre_scores_gemma":[0.99846894,0.000025818701,0.000013469224,0.00016231337,0.0001257457,0.000031557352,0.00039200133,0.000013965034,0.00076621573],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9988877,0.000236678,0.0003359343,0.00023586665,0.000023442864,0.00028033386],"domain_scores_gemma":[0.9993727,0.00021794612,0.000111765235,0.00022930479,0.000051414267,0.000016846836],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00008877757,0.00015388874,0.00029989413,0.00008822839,0.00017832432,0.000005665626,0.00009710619,0.00017147984,0.0015728262],"category_scores_gemma":[0.00008496918,0.00011916697,0.00014860187,0.000056685953,0.00015466793,0.00010033596,0.000030340218,0.00012911757,0.00041569213],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015364352,0.00028034372,0.40474534,0.000011059272,0.00024852375,0.000003400846,0.00013589808,0.0010137758,0.58549064,0.00075145,0.0057497188,0.001416184],"study_design_scores_gemma":[0.004359917,0.000278425,0.72204465,0.00005168466,0.00057120476,0.000022104061,0.00013267717,0.00024187121,0.22397478,0.019505989,0.028166048,0.00065067987],"about_ca_topic_score_codex":0.0031909794,"about_ca_topic_score_gemma":0.00022837298,"teacher_disagreement_score":0.36151588,"about_ca_system_score_codex":0.000021521084,"about_ca_system_score_gemma":0.000015339949,"threshold_uncertainty_score":0.9993399},"labels":[],"label_agreement":null},{"id":"W2008382192","doi":"10.3201/eid1009.040117","title":"Rubella Epidemic Strain, Greece, 1999","year":2004,"lang":"en","type":"letter","venue":"Emerging infectious diseases","topic":"Virology and Viral Diseases","field":"Medicine","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Rubella; Measles; Vaccination; Rubella vaccine; Virology; Rubella virus; MMR vaccine; Outbreak; Measles-Mumps-Rubella Vaccine; Congenital rubella syndrome; Medicine; Demography; Geography","score_opus":0.01288476656414078,"score_gpt":0.27773561797012,"score_spread":0.2648508514059792,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2008382192","genre_codex":"commentary","genre_gemma":"commentary","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"commentary","genre_consensus":"commentary","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.028794015,0.036293995,0.00027242707,0.89940906,0.004718027,0.002586463,0.0029147589,0.0037504113,0.021260869],"genre_scores_gemma":[0.13546653,0.0008709805,0.000025761432,0.84458184,0.010244214,0.00018953413,0.0038132342,0.00023966054,0.004568247],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9967733,0.00018836709,0.0006169978,0.000934008,0.0005334416,0.00095387816],"domain_scores_gemma":[0.9981326,0.00018815896,0.0003032546,0.00084944715,0.00013572405,0.00039080624],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00009634877,0.00077214267,0.001057973,0.00051809644,0.0003456358,0.00004254303,0.00023605886,0.001015539,0.0021061029],"category_scores_gemma":[0.0005268693,0.0007263753,0.0008651347,0.000353065,0.00037308142,0.0001339221,0.000103479615,0.0020952164,0.0009166451],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000082557526,0.00036676868,0.04240564,0.0010858875,0.0006300133,0.0032886455,0.00003066419,0.00007985733,0.000025324038,0.00008489608,0.9493447,0.0025750364],"study_design_scores_gemma":[0.0029484974,0.0008255468,0.045511577,0.0010302335,0.0036659436,0.00042466947,0.000012712297,0.000035571742,0.000011487564,0.007972183,0.9363873,0.0011742578],"about_ca_topic_score_codex":0.00023780165,"about_ca_topic_score_gemma":0.000017107584,"teacher_disagreement_score":0.10667252,"about_ca_system_score_codex":0.00029985124,"about_ca_system_score_gemma":0.0006493502,"threshold_uncertainty_score":0.99986124},"labels":[],"label_agreement":null},{"id":"W2008675960","doi":"10.3201/eid1401.071113","title":"Dogs as Sources and Sentinels of Parasites in Humans and Wildlife, Northern Canada","year":2008,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Parasitic Infections and Diagnostics","field":"Immunology and Microbiology","cited_by":147,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Government of Northwest Territories; University of Calgary","funders":"Natural Sciences and Engineering Research Council of Canada; Bayer Animal Health; Ministry of Education, India","keywords":"Wildlife; Geography; Disease reservoir; Biology; Zoology; Ecology; Virology","score_opus":0.004959637154922951,"score_gpt":0.21931089408901985,"score_spread":0.2143512569340969,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2008675960","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9958073,0.0029484166,0.000010704774,0.00006972131,0.00018776172,0.00009073321,0.00003758502,0.00003348282,0.0008143189],"genre_scores_gemma":[0.9991692,0.00041998294,0.0000022695099,0.0001798154,0.000020384798,0.000011751684,0.000023447818,0.000008751969,0.00016440015],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9993593,0.00005900368,0.00018806341,0.00017074792,0.000029611016,0.00019324991],"domain_scores_gemma":[0.9995139,0.00024032113,0.000070859634,0.00009954582,0.000042420117,0.000032937616],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000036051893,0.00012035295,0.00020062996,0.00010482966,0.00023492763,0.000005833156,0.00003376166,0.000054228443,0.00008592658],"category_scores_gemma":[0.00019902863,0.00011706853,0.000026953046,0.000108828346,0.00022281245,0.000051030343,0.00003234949,0.00008862458,0.000007130875],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000009739233,0.00010527968,0.9975156,0.000021405816,0.000055549594,0.000023305198,0.00031552266,0.000121048455,0.0005904954,0.00015456657,0.0008695227,0.00021796177],"study_design_scores_gemma":[0.00073431974,0.00006333207,0.9944659,0.000033704528,0.00004827204,0.00013109828,0.00013742362,0.000005239393,0.0005397376,0.00015006398,0.0035437655,0.00014714908],"about_ca_topic_score_codex":0.31089455,"about_ca_topic_score_gemma":0.2788065,"teacher_disagreement_score":0.032088056,"about_ca_system_score_codex":0.000023560036,"about_ca_system_score_gemma":0.00014712283,"threshold_uncertainty_score":0.7343534},"labels":[],"label_agreement":null},{"id":"W2010552465","doi":"10.3201/eid1411.080741","title":"Framework for Leadership and Training of Biosafety Level 4 Laboratory Workers","year":2008,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Biomedical and Engineering Education","field":"Engineering","cited_by":42,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canadian Food Inspection Agency; Public Health Agency of Canada","funders":"National Institute of Allergy and Infectious Diseases; National Institutes of Health","keywords":"Biosafety; Certification; Documentation; Medical education; Training (meteorology); Medicine; Computer science; Management; Pathology","score_opus":0.054274175986888676,"score_gpt":0.2585738409937084,"score_spread":0.20429966500681973,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2010552465","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8570848,0.004286556,0.1353319,0.00042593858,0.0015167753,0.00020237132,0.00013234193,0.00081145065,0.0002078595],"genre_scores_gemma":[0.99755186,0.00012301427,0.001995165,0.000040340266,0.00020122145,0.000032020343,0.00001236255,0.000026068763,0.000017974566],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99949324,0.0000069805287,0.00013490122,0.00010457997,0.00007553096,0.0001847487],"domain_scores_gemma":[0.9996276,0.00012975847,0.000020609008,0.00008708166,0.000027650261,0.00010731445],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000046131638,0.00010378874,0.00013252886,0.00008897332,0.00007263597,0.000005558231,0.000040443276,0.000070501505,0.000018560924],"category_scores_gemma":[0.00014165658,0.00010766778,0.000043584092,0.00021841483,0.00008080116,0.00006592467,0.0000061409633,0.00008571707,0.000001531842],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00018051556,0.0010330473,0.5301983,0.0196419,0.0020173602,0.000028022701,0.041917257,0.08877248,0.00966043,0.026383922,0.06882743,0.21133938],"study_design_scores_gemma":[0.0018100616,0.00024491255,0.9476533,0.0011695419,0.0002393726,0.000033679724,0.0035790761,0.019933281,0.0023037042,0.00482436,0.016827978,0.001380715],"about_ca_topic_score_codex":0.000006636915,"about_ca_topic_score_gemma":0.0000012804103,"teacher_disagreement_score":0.41745505,"about_ca_system_score_codex":0.000024156725,"about_ca_system_score_gemma":0.000032769432,"threshold_uncertainty_score":0.43905646},"labels":[],"label_agreement":null},{"id":"W2010920514","doi":"10.3201/eid1712.110658","title":"Seroprevalence of Alkhurma and Other Hemorrhagic Fever Viruses, Saudi Arabia","year":2011,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Viral Infections and Vectors","field":"Medicine","cited_by":50,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"Seroprevalence; Rift Valley fever; Dengue fever; Virology; Dengue hemorrhagic fever; Dengue virus; Crimean–Congo hemorrhagic fever; Geography; Medicine; Virus; Immunology; Serology; Antibody","score_opus":0.031569019348158506,"score_gpt":0.2819042101492403,"score_spread":0.2503351908010818,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2010920514","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99106216,0.0008901585,0.00013734234,0.00002109353,0.00023114942,0.00020196052,0.000023584096,0.00018039824,0.007252152],"genre_scores_gemma":[0.998792,0.00012626252,0.000100651996,0.0005290462,0.00010111707,0.00001914287,0.0000024213218,0.000030317862,0.00029902588],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9991427,0.00003821971,0.00023492843,0.0002402775,0.00013895797,0.0002049243],"domain_scores_gemma":[0.99936926,0.000026341166,0.00010246973,0.00025840505,0.0000779264,0.00016558064],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.000058778976,0.0001673872,0.0002614351,0.0001566158,0.00010460958,0.000009802148,0.00004330348,0.0000541678,0.0014292983],"category_scores_gemma":[0.00008555825,0.00014455363,0.00011560598,0.00024949413,0.00014317094,0.00012337972,0.00004157724,0.00010542879,0.000037782374],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000045910416,0.00037701198,0.994865,0.00022130791,0.00009852259,0.000013571209,0.0003461194,0.000008695448,0.0014326513,0.00023569213,0.00069159013,0.0016639192],"study_design_scores_gemma":[0.0013325698,0.00052078883,0.9877057,0.00024652836,0.0005202852,0.00017244765,0.00012319797,0.00031913724,0.0035016113,0.00043965463,0.0048051253,0.00031291685],"about_ca_topic_score_codex":0.0007276641,"about_ca_topic_score_gemma":0.000047385274,"teacher_disagreement_score":0.007729853,"about_ca_system_score_codex":0.000030759336,"about_ca_system_score_gemma":0.000039449256,"threshold_uncertainty_score":0.9994835},"labels":[],"label_agreement":null},{"id":"W2011564692","doi":"10.3201/eid1801.110515","title":"Molecular Evolution of Respiratory Syncytial Virus Fusion Gene, Canada, 2006–2010","year":2012,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Respiratory viral infections research","field":"Medicine","cited_by":53,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Institut National de Santé Publique du Québec; Centre hospitalier universitaire de Québec; McMaster Children's Hospital; McGill University Health Centre","funders":"Canadian Institutes of Health Research; Centers for Disease Control and Prevention; McMaster University; Seoul National University; McGill University; Université Laval; Abbott Laboratories","keywords":"Palivizumab; Virus; Virology; Respiratory system; Biology; Fusion gene; Gene; Genetics","score_opus":0.016048383443992953,"score_gpt":0.30191349278474544,"score_spread":0.2858651093407525,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2011564692","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9897129,0.005370929,0.0008831296,0.00004341101,0.0009065851,0.00042752223,0.00007407462,0.0001412158,0.002440209],"genre_scores_gemma":[0.9987963,0.00003000204,0.000020408643,0.0003061074,0.00052731513,0.00006425623,0.000019810424,0.000048130798,0.00018770219],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.997816,0.00019529673,0.0004270231,0.00027278045,0.00072502013,0.00056386617],"domain_scores_gemma":[0.9984865,0.00005833875,0.00015048072,0.0005081274,0.00031451773,0.00048199118],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00018213458,0.00022557455,0.0003381834,0.00041825118,0.00021835128,0.000014461512,0.00009665108,0.00010806858,0.0004041432],"category_scores_gemma":[0.00053135504,0.0002212081,0.0001685587,0.00064281473,0.00012766043,0.00023549072,0.00008987785,0.00027301983,0.00004413375],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000103098566,0.0005227594,0.7614218,0.0001362431,0.00011961591,0.000034356584,0.000019907384,0.000486159,0.22504096,0.00027190812,0.010269726,0.0015734592],"study_design_scores_gemma":[0.0014715153,0.0004873078,0.8824679,0.00009277474,0.00030114964,0.00004694729,0.00005361834,0.00014795602,0.089584015,0.00005017245,0.02492817,0.00036845173],"about_ca_topic_score_codex":0.15684515,"about_ca_topic_score_gemma":0.029286189,"teacher_disagreement_score":0.13545693,"about_ca_system_score_codex":0.0009485642,"about_ca_system_score_gemma":0.0012536704,"threshold_uncertainty_score":0.9884268},"labels":[],"label_agreement":null},{"id":"W2012533504","doi":"10.3201/eid2005.131575","title":"Ciprofloxacin-Resistant<i>Salmonella enterica</i>Serotype Kentucky Sequence Type 198","year":2014,"lang":"en","type":"letter","venue":"Emerging infectious diseases","topic":"Salmonella and Campylobacter epidemiology","field":"Agricultural and Biological Sciences","cited_by":20,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Ciprofloxacin; Salmonella enterica; Serotype; Broth microdilution; Microbiology; Salmonella; Antibiotic resistance; Cephalosporin; Multilocus sequence typing; Biology; Antimicrobial; Medicine; Antibiotics; Virology; Minimum inhibitory concentration; Bacteria; Genotype; Genetics","score_opus":0.032314831991336876,"score_gpt":0.25945477738171624,"score_spread":0.22713994539037935,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2012533504","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.75658005,0.003750882,0.000014689414,0.22214454,0.00500885,0.0010350792,0.000543362,0.001754695,0.009167824],"genre_scores_gemma":[0.56043583,0.0007700276,0.000013330205,0.42264992,0.010555422,0.0001165329,0.0026889346,0.000023500701,0.0027464696],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9958846,0.0006862053,0.0006927019,0.001196603,0.0004634039,0.0010764872],"domain_scores_gemma":[0.9978766,0.0007542241,0.00053090445,0.00036248166,0.00022145927,0.0002543651],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00022751797,0.00074950897,0.00094248645,0.00006781874,0.00045280793,0.00014345336,0.00072847086,0.0007748498,0.0017638621],"category_scores_gemma":[0.0003826236,0.00035656462,0.000492581,0.000651676,0.00021784542,0.00011860016,0.00021357239,0.0010572661,0.0008435185],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000060983934,0.000081175735,0.054751825,0.0001018743,0.00012681699,0.00021180771,0.000018397594,0.000010499676,0.011123226,0.00002366718,0.929908,0.003581744],"study_design_scores_gemma":[0.00015611456,0.0005234479,0.019255493,0.00012951164,0.00019235973,0.000041758525,0.000013421517,0.000024047516,0.00007657035,0.00089037884,0.97784543,0.00085145416],"about_ca_topic_score_codex":0.00085642334,"about_ca_topic_score_gemma":0.00009561052,"teacher_disagreement_score":0.20050539,"about_ca_system_score_codex":0.00014127017,"about_ca_system_score_gemma":0.000035632034,"threshold_uncertainty_score":0.99993443},"labels":[],"label_agreement":null},{"id":"W2013021821","doi":"10.3201/eid1704.100482","title":"High Rates of<i>Staphylococcus aureus</i>USA400 Infection, Northern Canada","year":2011,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Antimicrobial Resistance in Staphylococcus","field":"Medicine","cited_by":38,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Saskatchewan Disease Control Laboratory; University of Manitoba; Public Health Agency of Canada; Canadian Science Centre for Human and Animal Health","funders":"Canadian Institutes of Health Research; Public Health Agency; Public Health Agency of Canada","keywords":"Staphylococcus aureus; Staphylococcal infections; Microbiology; Methicillin-resistant Staphylococcus aureus; Biology; Medicine; Bacteria; Genetics","score_opus":0.01161552364943807,"score_gpt":0.2428804262544195,"score_spread":0.23126490260498142,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2013021821","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99301296,0.00062757963,0.0003128954,0.00009837336,0.00087099924,0.0004559962,0.00010924182,0.00023807521,0.0042738556],"genre_scores_gemma":[0.99865013,0.00013336475,0.00010261099,0.0003906008,0.0002605013,0.000047905494,0.00004563414,0.00006675451,0.00030251517],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.998124,0.000066605135,0.0005390374,0.00041138745,0.0003839302,0.0004750395],"domain_scores_gemma":[0.99827546,0.00008670325,0.00029694312,0.0005373316,0.0004952689,0.00030826827],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00008398018,0.00033978556,0.00055251864,0.00021057772,0.00020743912,0.000014755775,0.00012817526,0.00009251586,0.0007327191],"category_scores_gemma":[0.00031256524,0.00032279285,0.00023384123,0.0006030469,0.00020257103,0.00012616975,0.0000628881,0.00021990987,0.000026092153],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00017442125,0.00039716696,0.98494047,0.00024250554,0.00028035554,0.00008555711,0.00017802429,0.000121154764,0.0022106555,0.00027353477,0.010004734,0.0010914097],"study_design_scores_gemma":[0.0013294951,0.0002650058,0.9717245,0.00021472653,0.00042537166,0.000015649513,0.00008508414,0.000016352105,0.016050408,0.00043264698,0.008996425,0.0004443297],"about_ca_topic_score_codex":0.559973,"about_ca_topic_score_gemma":0.5477248,"teacher_disagreement_score":0.013839752,"about_ca_system_score_codex":0.0002900724,"about_ca_system_score_gemma":0.0011132923,"threshold_uncertainty_score":0.9999224},"labels":[],"label_agreement":null},{"id":"W2013398358","doi":"10.3201/eid1611.100877","title":"Enteric Viruses in Ready-to-Eat Packaged Leafy Greens","year":2010,"lang":"en","type":"letter","venue":"Emerging infectious diseases","topic":"Viral gastroenteritis research and epidemiology","field":"Medicine","cited_by":63,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Public Health Agency of Canada; University of Ottawa; Health Canada","funders":"","keywords":"Leafy vegetables; Virology; Leafy; Biology; Microbiology; Food science; Botany","score_opus":0.027099713804454553,"score_gpt":0.3301956412601553,"score_spread":0.3030959274557008,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2013398358","genre_codex":"empirical","genre_gemma":"commentary","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"commentary","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.560916,0.00081283343,0.00016844958,0.42991498,0.0022493617,0.0017001948,0.00060275133,0.0006994356,0.002935966],"genre_scores_gemma":[0.27469724,0.00044237534,0.00008961853,0.7150596,0.005812294,0.00039888857,0.0011145272,0.00018318644,0.0022022843],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99616164,0.0004335705,0.00066624145,0.0008727867,0.000497271,0.0013685031],"domain_scores_gemma":[0.9982456,0.00012723326,0.00016197278,0.0007930635,0.0001414088,0.00053070224],"candidate_categories":["metaepi_narrow","research_integrity","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00023495639,0.00056642696,0.0011619884,0.0010388939,0.00014023227,0.000056217024,0.0002694079,0.00088070915,0.0011112309],"category_scores_gemma":[0.0019032412,0.0005264791,0.00037445195,0.00042975112,0.00020914209,0.00010877709,0.00021464913,0.0046629035,0.0006737681],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013387507,0.00013927232,0.34178102,0.00028821517,0.000098759316,0.0024449239,0.000030613504,0.000005529607,0.0006078,0.0000012915776,0.65289176,0.0015769248],"study_design_scores_gemma":[0.0015106461,0.0010330947,0.1463251,0.0006100255,0.00015163244,0.00035541455,0.000014981281,0.00002139593,0.000018470906,0.00009520094,0.84942853,0.0004355025],"about_ca_topic_score_codex":0.0016735872,"about_ca_topic_score_gemma":0.0009802443,"teacher_disagreement_score":0.2862188,"about_ca_system_score_codex":0.0002615178,"about_ca_system_score_gemma":0.00017220684,"threshold_uncertainty_score":0.9998019},"labels":[],"label_agreement":null},{"id":"W2014378670","doi":"10.3201/eid1912.130319","title":"Powassan Virus in Mammals, Alaska and New Mexico, USA, and Russia, 2004–2007","year":2013,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Viral Infections and Vectors","field":"Medicine","cited_by":62,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"U.S. Department of Agriculture; U.S. Fish and Wildlife Service; Alaska Department of Fish and Game; National Park Service; U.S. Forest Service; U.S. Geological Survey; Massachusetts Department of Fish and Game; National Science Foundation","keywords":"Virus; Geography; Arctic; Ross River virus; Ecology; Biology; Virology; Environmental protection","score_opus":0.01276806849731046,"score_gpt":0.26704244632474755,"score_spread":0.2542743778274371,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2014378670","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99172866,0.0024498757,0.000106756146,0.0006221535,0.0002837837,0.00038654936,0.0000080921245,0.00013491028,0.0042792135],"genre_scores_gemma":[0.99694246,0.00048939756,0.0000449638,0.0005980361,0.00026038755,0.000042788415,0.000010826482,0.000031639043,0.0015794873],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99888355,0.000042390442,0.00025713735,0.0003326511,0.00014228457,0.0003419626],"domain_scores_gemma":[0.99920136,0.000052264226,0.00006250125,0.00019790976,0.000038580216,0.00044737806],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00006674368,0.00022109438,0.00030415968,0.00031604694,0.00014612879,0.000081100676,0.000032641274,0.00008584973,0.0018478727],"category_scores_gemma":[0.00012283369,0.00019618082,0.000070296526,0.0003003631,0.00010135409,0.0002861685,0.000053295073,0.00018477454,0.000136803],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000018560946,0.0002030593,0.9748369,0.000051789215,0.000052852934,0.000022328362,0.000106602514,0.000029569097,0.0005772341,0.00014130281,0.012993176,0.010966613],"study_design_scores_gemma":[0.0014673284,0.0002656551,0.9867289,0.000104730905,0.00010729538,0.000096905955,0.00007714909,0.00029988002,0.00018860331,0.00053401233,0.009887168,0.00024236018],"about_ca_topic_score_codex":0.0077251988,"about_ca_topic_score_gemma":0.0006925272,"teacher_disagreement_score":0.011891999,"about_ca_system_score_codex":0.00007052472,"about_ca_system_score_gemma":0.000079047095,"threshold_uncertainty_score":0.99906456},"labels":[],"label_agreement":null},{"id":"W2014382882","doi":"10.3201/eid1801.110716","title":"<i>Colpodella</i>spp.–like Parasite Infection in Woman, China","year":2012,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Vector-borne infectious diseases","field":"Immunology and Microbiology","cited_by":49,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"Gordon and Llura Gund Foundation; Science and Technology Commission of Shanghai Municipality; Tula Foundation; George Gund Foundation","keywords":"Apicomplexa; Protozoa; Biology; Babesia; Parasite hosting; Protozoan parasite; Intracellular parasite; Virology; Protozoan infection; Microbiology; Phylum; Zoology; Intracellular; Genetics; Bacteria; Immunology; Malaria; Protozoal disease","score_opus":0.007392015175855369,"score_gpt":0.24693532093108525,"score_spread":0.2395433057552299,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2014382882","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9789997,0.009416895,0.00022337137,0.000069882204,0.0039377813,0.00053375633,0.000061012182,0.0010746516,0.005683001],"genre_scores_gemma":[0.9972923,0.000499564,0.0000058023547,0.0005004831,0.0003310881,0.00025705207,0.00020000088,0.000083455685,0.00083028135],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99706316,0.00046667142,0.0005613423,0.00056082266,0.00011295773,0.0012350321],"domain_scores_gemma":[0.9987793,0.00016632369,0.00023595984,0.0005491949,0.000080150254,0.00018905969],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00026775454,0.00052012503,0.0005225655,0.0006203639,0.00046052065,0.000055175693,0.00018443137,0.00028782804,0.0022229175],"category_scores_gemma":[0.00027412816,0.0005398143,0.0003230539,0.00081715285,0.00021054431,0.0007105469,0.0001438736,0.0004880267,0.0024838767],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000782979,0.0016170389,0.98183215,0.00006282173,0.00022935162,0.000010240218,0.0003563778,0.00070827233,0.002222107,0.00036488083,0.010955872,0.0015625836],"study_design_scores_gemma":[0.0017449169,0.00015935341,0.9577165,0.00006376604,0.00020901443,0.00013395616,0.000033590342,0.000019985158,0.00089231046,0.00023512339,0.038156282,0.00063515804],"about_ca_topic_score_codex":0.0026997845,"about_ca_topic_score_gemma":0.0006995639,"teacher_disagreement_score":0.02720041,"about_ca_system_score_codex":0.0003403578,"about_ca_system_score_gemma":0.000105285486,"threshold_uncertainty_score":0.9997053},"labels":[],"label_agreement":null},{"id":"W2014780340","doi":"10.3201/eid1705.100754","title":"Genotypic Profile of<i>Streptococcus suis</i>Serotype 2 and Clinical Features of Infection in Humans, Thailand","year":2011,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Streptococcal Infections and Treatments","field":"Medicine","cited_by":91,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal","funders":"","keywords":"Serotype; Meningitis; Streptococcus suis; Multilocus sequence typing; Genotype; Biology; Sepsis; Case fatality rate; Microbiology; Incidence (geometry); Disease; Neonatal sepsis; Virology; Blood culture; Antibiotics; Medicine; Immunology; Epidemiology; Internal medicine; Virulence; Pediatrics; Genetics; Gene","score_opus":0.026884723044607886,"score_gpt":0.32012526860265794,"score_spread":0.29324054555805007,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2014780340","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9912014,0.00066427846,0.000023810659,0.000007801628,0.00023081618,0.0007218225,0.000023131213,0.00008059644,0.0070463493],"genre_scores_gemma":[0.9991411,0.0004372191,0.00006210291,0.000017838425,0.00007387209,0.00008673148,0.00002729774,0.000020572523,0.00013329288],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99883616,0.00007924896,0.00047884724,0.00029014717,0.00012626864,0.00018934798],"domain_scores_gemma":[0.9992204,0.00007845781,0.0001996074,0.0002613919,0.000112882124,0.0001272752],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00011068178,0.0001755884,0.00043214913,0.00027224582,0.00006201654,0.000006155689,0.000029398629,0.000108117514,0.00035135212],"category_scores_gemma":[0.00016802875,0.0001487704,0.00018061552,0.00031476168,0.00017000953,0.0000922641,0.000041647545,0.00016172581,0.000007417853],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000163641,0.0014814987,0.99239105,0.00016791503,0.00021919022,0.000013528176,0.00013692181,0.000002734285,0.00010278027,0.00020477998,0.00015133081,0.0049646175],"study_design_scores_gemma":[0.002062126,0.0009622926,0.99480563,0.00016612944,0.0003249263,0.000010391302,0.000021868129,0.000009476484,0.0010954086,0.00030874737,0.00011724074,0.00011578479],"about_ca_topic_score_codex":0.002346547,"about_ca_topic_score_gemma":0.00052856514,"teacher_disagreement_score":0.00793968,"about_ca_system_score_codex":0.000034963647,"about_ca_system_score_gemma":0.000071575145,"threshold_uncertainty_score":0.6066681},"labels":[],"label_agreement":null},{"id":"W2015145578","doi":"10.3201/eid1703.100833","title":"Active Tuberculosis among Homeless Persons, Toronto, Ontario, Canada, 1998–2007","year":2011,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Homelessness and Social Issues","field":"Health Professions","cited_by":47,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of Toronto; University Health Network; Toronto Public Health; St. Michael's Hospital","funders":"","keywords":"Foreign born; Tuberculosis; Medicine; Immigration; Disease; Demography; Gerontology; Environmental health; Population; Geography","score_opus":0.019987255278506446,"score_gpt":0.30642556495029327,"score_spread":0.28643830967178685,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2015145578","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.92782027,0.00073407847,0.000021301568,0.000018854484,0.0021687844,0.00047261978,0.0001290248,0.0002732952,0.06836175],"genre_scores_gemma":[0.99673915,0.00011420943,0.00001029345,0.00018824896,0.000524085,0.00030910308,0.00005315143,0.00005838428,0.0020033647],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9976966,0.00031317197,0.0004085549,0.00040599995,0.00036148063,0.0008142042],"domain_scores_gemma":[0.99869937,0.00017099772,0.00021822618,0.00032948315,0.00013797109,0.0004439533],"candidate_categories":["metaepi_narrow","sts","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00012651134,0.00031027535,0.0006073558,0.00006178061,0.0015144348,0.00001649176,0.00019861992,0.00018052559,0.011270378],"category_scores_gemma":[0.00008146173,0.0003012306,0.00015681967,0.00015499946,0.000088381435,0.00038597028,0.00011011935,0.00043323106,0.00007188998],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00003561682,0.00015813814,0.9279907,0.00009934349,0.00016813827,0.00002237287,0.06683073,0.0000027128679,0.0000018581997,0.00033589406,0.002409317,0.001945228],"study_design_scores_gemma":[0.0004695885,0.000041983,0.89704573,0.00012553863,0.00014340613,1.6634917e-7,0.09120099,0.000008748244,0.000011478498,0.0001316006,0.010452595,0.00036816997],"about_ca_topic_score_codex":0.9988463,"about_ca_topic_score_gemma":0.999847,"teacher_disagreement_score":0.06891888,"about_ca_system_score_codex":0.0026007278,"about_ca_system_score_gemma":0.0015435098,"threshold_uncertainty_score":0.999944},"labels":[],"label_agreement":null},{"id":"W2016696391","doi":"10.3201/eid1601.090030","title":"Some Haphazard Aphorisms for Epidemiology and Life","year":2009,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Health and Conflict Studies","field":"Health Professions","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Amusement; Glory; Epidemiology; Quarter (Canadian coin); History; Medicine; Sociology; Environmental ethics; Philosophy; Psychology","score_opus":0.07055224495494093,"score_gpt":0.4473839781119622,"score_spread":0.37683173315702123,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2016696391","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8448549,0.03955266,0.002774124,0.10012224,0.0037350876,0.0028057317,0.00017331302,0.0011837413,0.0047982223],"genre_scores_gemma":[0.93356264,0.0020153492,0.00006741925,0.061429597,0.001940426,0.00046662483,0.000020554855,0.000020553292,0.00047685762],"study_design_codex":"observational","study_design_gemma":"not_applicable","domain_scores_codex":[0.998124,0.00024991625,0.000501388,0.0003038567,0.00006932372,0.0007515209],"domain_scores_gemma":[0.99750894,0.0015481113,0.00017347874,0.00018136857,0.00010227565,0.00048584328],"candidate_categories":["sts"],"consensus_categories":[],"category_scores_codex":[0.0004524952,0.00017209491,0.00045026667,0.00008617549,0.0015591412,0.0000040183913,0.00006200775,0.00012138827,0.00006866149],"category_scores_gemma":[0.003395013,0.00015044285,0.0000971454,0.00010493327,0.000064708736,0.00009872306,0.00004046066,0.00021779409,0.000054958913],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00017743415,0.00018668328,0.80592847,0.0006423198,0.0001273272,0.0000034436516,0.005202828,0.00003732434,0.000014977058,0.04430628,0.11256146,0.030811477],"study_design_scores_gemma":[0.0014658727,0.00039671795,0.47801697,0.00008608088,0.000090845584,0.0000010729837,0.0005579671,0.000262515,0.0000011742313,0.02212633,0.4967406,0.00025383692],"about_ca_topic_score_codex":0.00014213545,"about_ca_topic_score_gemma":0.000013709169,"teacher_disagreement_score":0.38417915,"about_ca_system_score_codex":0.000051819366,"about_ca_system_score_gemma":0.00019619256,"threshold_uncertainty_score":0.9997407},"labels":[],"label_agreement":null},{"id":"W2017640907","doi":"10.3201/eid0807.010506","title":"High Risk for Tuberculosis in Hospital Physicians, Peru","year":2002,"lang":"en","type":"letter","venue":"Emerging infectious diseases","topic":"Tuberculosis Research and Epidemiology","field":"Medicine","cited_by":51,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"Johns Hopkins Bloomberg School of Public Health; Fogarty International Center; National Institutes of Health; Johns Hopkins University; United States Agency for International Development","keywords":"Medicine; Tuberculosis; Tuberculin; Incidence (geometry); Population; Pediatrics; Emergency medicine; Environmental health; Pathology","score_opus":0.010636230083892513,"score_gpt":0.2804880938836367,"score_spread":0.2698518637997442,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2017640907","genre_codex":"commentary","genre_gemma":"commentary","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"commentary","genre_consensus":"commentary","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.2023757,0.005159139,0.0001967856,0.78390616,0.0020957703,0.002892106,0.0017100094,0.00061415636,0.0010501911],"genre_scores_gemma":[0.34560224,0.010850794,0.00045712336,0.60445344,0.025971854,0.0031897575,0.0056353444,0.00054719206,0.0032922246],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9963573,0.00033405807,0.00062334427,0.00095776725,0.00045748422,0.0012700197],"domain_scores_gemma":[0.9978055,0.00083739666,0.00026365725,0.0006792003,0.00018672577,0.00022752982],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00020074604,0.0005952564,0.001309594,0.0006745895,0.00021555347,0.00004357966,0.00020235463,0.00070136605,0.00052783807],"category_scores_gemma":[0.0021066815,0.00056070584,0.0008672962,0.00042185144,0.00017582052,0.0001234222,0.000082400016,0.0020002106,0.00018894709],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00004526887,0.0005160441,0.171632,0.0005848271,0.0005262456,0.0002598637,0.00006999479,0.00007077666,0.0000029207743,0.000011399695,0.81641763,0.009863042],"study_design_scores_gemma":[0.002845225,0.0015026724,0.11825213,0.0005227865,0.0011016906,0.00002693812,0.000034644832,0.0005312834,0.000009447464,0.0008025074,0.8735656,0.00080506783],"about_ca_topic_score_codex":0.0024396365,"about_ca_topic_score_gemma":0.00010049051,"teacher_disagreement_score":0.17945267,"about_ca_system_score_codex":0.00041893925,"about_ca_system_score_gemma":0.00010056449,"threshold_uncertainty_score":0.99968445},"labels":[],"label_agreement":null},{"id":"W2020006158","doi":"10.3201/eid1303.060988","title":"<i>Clostridium difficile</i>in Retail Ground Meat, Canada","year":2007,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Clostridium difficile and Clostridium perfringens research","field":"Medicine","cited_by":257,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of Guelph","funders":"Ontario Veterinary College, University of Guelph","keywords":"Clostridium difficile; Virulence; Microbiology; Clostridium; Food microbiology; Clostridiaceae; Veterinary medicine; Clostridium Infections; Biology; Medicine; Bacteria; Antibiotics; Toxin; Gene","score_opus":0.013348788474506315,"score_gpt":0.2705623023226314,"score_spread":0.2572135138481251,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2020006158","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9762056,0.0017243681,0.000055870732,0.0009765698,0.00060989585,0.0005541541,0.00005682203,0.00023092011,0.019585785],"genre_scores_gemma":[0.996395,0.00022487913,0.0000133986305,0.00052884896,0.00065506896,0.000027689854,0.00010613721,0.000071695584,0.0019772823],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9964535,0.00006393969,0.00065877306,0.00062677293,0.0010372091,0.0011597953],"domain_scores_gemma":[0.9980814,0.00030518038,0.000109787965,0.0005906009,0.00021757337,0.0006954838],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00032559215,0.00039343978,0.00055642106,0.00043709445,0.0002384443,0.000053389344,0.00018364162,0.00013197867,0.0010106182],"category_scores_gemma":[0.00055400276,0.00038643423,0.00021537593,0.0011816847,0.000116432624,0.00010938958,0.000114107286,0.0005688832,0.00005480944],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0013032834,0.0025712135,0.9028511,0.00060966186,0.00036941687,0.005240559,0.0002431734,0.0002972226,0.024379099,0.00067942054,0.03541574,0.026040103],"study_design_scores_gemma":[0.011460481,0.001101487,0.68476224,0.00065478904,0.00063094666,0.00073046755,0.0016716754,0.000631685,0.12065715,0.00015527794,0.17552567,0.0020181192],"about_ca_topic_score_codex":0.2746964,"about_ca_topic_score_gemma":0.43856907,"teacher_disagreement_score":0.21808887,"about_ca_system_score_codex":0.0011730855,"about_ca_system_score_gemma":0.0014850608,"threshold_uncertainty_score":0.9999026},"labels":[],"label_agreement":null},{"id":"W2021540779","doi":"10.3201/eid2105.141325","title":"Fatal<i>Balamuthia mandrillaris</i>Meningoencephalitis in the Netherlands after Travel to The Gambia","year":2015,"lang":"en","type":"letter","venue":"Emerging infectious diseases","topic":"Legionella and Acanthamoeba research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":14,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Meningoencephalitis; Medicine; Headaches; Pediatrics; Pathology; Surgery","score_opus":0.011419861025262297,"score_gpt":0.26770701137558506,"score_spread":0.25628715035032273,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2021540779","genre_codex":"commentary","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.4273784,0.011223773,0.00056230073,0.54417396,0.002260326,0.0026562142,0.0010702289,0.000110523455,0.0105642835],"genre_scores_gemma":[0.7533002,0.0003139302,0.000005300879,0.23560935,0.006587708,0.00054348406,0.00085432024,0.00008289088,0.0027028134],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9973201,0.00045268235,0.00029797232,0.0006235953,0.00061644166,0.00068918336],"domain_scores_gemma":[0.9987264,0.000065146414,0.00008962935,0.00087175093,0.00012481264,0.00012223497],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00039230095,0.00039241725,0.00028092746,0.00013134234,0.00020735028,0.00020789001,0.0007251026,0.0003992148,0.000080352846],"category_scores_gemma":[0.00017339007,0.00024620042,0.00022709044,0.00033870357,0.00014924,0.000007168646,0.00024679757,0.0008374558,0.00006949206],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000047120175,0.000045301407,0.01345137,0.000049451035,0.00007202956,0.00025214677,0.00052229216,0.000050161205,0.00014609401,0.0000032534754,0.98496133,0.00039943395],"study_design_scores_gemma":[0.00045278252,0.00021162123,0.008228708,0.000060881426,0.00006817679,0.000087586304,0.00018075174,0.0000133718895,0.00013061662,0.00013333942,0.99002355,0.00040858888],"about_ca_topic_score_codex":0.00050359685,"about_ca_topic_score_gemma":0.00041272384,"teacher_disagreement_score":0.3259218,"about_ca_system_score_codex":0.000051991523,"about_ca_system_score_gemma":0.00021057387,"threshold_uncertainty_score":0.99999905},"labels":[],"label_agreement":null},{"id":"W2021772732","doi":"10.3201/eid1906.120873","title":"Foodborne Botulism in Canada, 1985–2005","year":2013,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Botulinum Toxin and Related Neurological Disorders","field":"Medicine","cited_by":64,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Health Canada","funders":"Canadian Food Inspection Agency","keywords":"Botulism; Outbreak; Clostridium botulinum; Case fatality rate; Population; Environmental health; Food poisoning; Geography; Medicine; Veterinary medicine; Biology; Food science; Toxin; Virology; Microbiology","score_opus":0.005199501745886161,"score_gpt":0.2090571421366092,"score_spread":0.20385764039072304,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2021772732","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98399854,0.0012803067,0.000011953858,0.0049801464,0.00034975316,0.0004038961,0.0000069075572,0.00016344764,0.008805039],"genre_scores_gemma":[0.994717,0.00035215294,0.0000087512435,0.0041873637,0.00007944982,0.00006837324,0.000016157099,0.000024727637,0.00054599287],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99874043,0.000047788806,0.00025994948,0.0002862429,0.0002143137,0.00045124182],"domain_scores_gemma":[0.9993087,0.00007180463,0.000049929382,0.00021044124,0.000037586844,0.00032152064],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00002949195,0.0001780832,0.00026378332,0.00011195987,0.000074838536,0.000016182115,0.00006874192,0.00007744131,0.001992817],"category_scores_gemma":[0.000126025,0.00014488796,0.00009190623,0.00028316176,0.00004904341,0.0000799575,0.00003562726,0.00030553096,0.00016032325],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000042559637,0.000492334,0.94113547,0.00007263549,0.0000920211,0.00023816987,0.000051667295,0.0009583293,0.00030780787,0.00014577775,0.045677055,0.010786159],"study_design_scores_gemma":[0.0016239589,0.00013168908,0.9861637,0.000052285915,0.00006729536,0.00003519961,0.00008046506,0.0012562051,0.000039326038,0.00085401745,0.009474735,0.00022116625],"about_ca_topic_score_codex":0.5406302,"about_ca_topic_score_gemma":0.39913446,"teacher_disagreement_score":0.1414958,"about_ca_system_score_codex":0.0001998469,"about_ca_system_score_gemma":0.00045335406,"threshold_uncertainty_score":0.9989195},"labels":[],"label_agreement":null},{"id":"W2023297132","doi":"10.3201/eid1701.101358","title":"New Delhi Metallo-β-Lactamase in<i>Klebsiella pneumoniae</i>and<i>Escherichia coli,</i>Canada","year":2010,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Antibiotic Resistance in Bacteria","field":"Biochemistry, Genetics and Molecular Biology","cited_by":175,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Public Health Agency of Canada","funders":"","keywords":"Klebsiella pneumoniae; New delhi; Escherichia coli; Microbiology; Plasmid; Multiple drug resistance; Klebsiella; Biology; Klebsiella infections; Enterobacteriaceae; Gene; Drug resistance; Medicine; Genetics","score_opus":0.002725510037002635,"score_gpt":0.21014827404639508,"score_spread":0.20742276400939244,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2023297132","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9966295,0.00056020025,0.00021723584,0.0001864537,0.00075914076,0.00016914685,0.000024037681,0.000037589867,0.0014167351],"genre_scores_gemma":[0.99789596,0.00019053154,0.0002682027,0.0004791167,0.0003320534,0.000009973148,0.00004977679,0.000040472725,0.00073390995],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9987416,0.000049263836,0.0002560793,0.00043850986,0.00015715891,0.00035738797],"domain_scores_gemma":[0.99916446,0.000028521765,0.00009985306,0.0003857898,0.000047572976,0.00027377866],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00007684453,0.00024472122,0.00021813557,0.000048985945,0.00010840628,0.00005854657,0.00016935461,0.00011336432,0.00011494835],"category_scores_gemma":[0.00022125612,0.0002529164,0.000073952964,0.00015370367,0.00007593071,0.0000107650085,0.00011581999,0.00018842836,0.000005507503],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00004632827,0.0000763935,0.5299786,0.000034911933,0.0000647164,0.000028427972,0.000020800222,0.000048148173,0.46203846,0.00015727316,0.006220155,0.0012857849],"study_design_scores_gemma":[0.002118485,0.00022205384,0.7245484,0.000059113227,0.00016916783,0.000064171996,0.000113157046,0.0001570465,0.0346631,0.00044485345,0.2362011,0.0012393503],"about_ca_topic_score_codex":0.028542964,"about_ca_topic_score_gemma":0.2522388,"teacher_disagreement_score":0.42737538,"about_ca_system_score_codex":0.000026922424,"about_ca_system_score_gemma":0.00056446303,"threshold_uncertainty_score":0.9999923},"labels":[],"label_agreement":null},{"id":"W2026752478","doi":"10.3201/eid1401.061522","title":"Invasive Bacterial Diseases in Northern Canada","year":2008,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Pneumonia and Respiratory Infections","field":"Medicine","cited_by":34,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Public Health Agency of Canada; Institute for Clinical Evaluative Sciences; Provincial Laboratory of Public Health; Hospital for Sick Children","funders":"","keywords":"Streptococcus pneumoniae; Haemophilus influenzae; Epidemiology; Incidence (geometry); Population; Circumpolar star; Serotype; Conjugate vaccine; Medicine; Demography; Geography; Biology; Environmental health; Microbiology; Virology; Internal medicine; Antibiotics","score_opus":0.008321609957945777,"score_gpt":0.22705826656363695,"score_spread":0.21873665660569117,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2026752478","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9963351,0.00024776353,0.0000050755957,0.0004622412,0.00083565083,0.0002733911,0.00007287531,0.00018168993,0.0015862258],"genre_scores_gemma":[0.9981742,0.00011735858,9.390988e-7,0.0008662453,0.00048055075,0.00007447645,0.00006930285,0.0000315559,0.00018539735],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9987896,0.000060617625,0.00026987758,0.00028272512,0.00025819524,0.0003389758],"domain_scores_gemma":[0.999135,0.00009752455,0.00007214495,0.00025569552,0.000095989824,0.00034362593],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00001941705,0.00020401634,0.00030799996,0.00019127919,0.00028744777,0.000012491996,0.000060391118,0.000049684353,0.0002674592],"category_scores_gemma":[0.0003564345,0.00018797931,0.00012733882,0.00037323116,0.000095310854,0.00010909115,0.000035030345,0.0001535238,0.00003361077],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000030343364,0.00036702838,0.9944991,0.00005450703,0.000062268606,0.0007682963,0.000085105705,0.0002390151,0.0010499861,0.000009863094,0.0025289385,0.00030557503],"study_design_scores_gemma":[0.001329211,0.00012092177,0.9824993,0.0000726837,0.000103775645,0.00017673265,0.00005749662,0.0000138845335,0.0001207499,0.000027865502,0.015256741,0.00022064803],"about_ca_topic_score_codex":0.09516016,"about_ca_topic_score_gemma":0.7206524,"teacher_disagreement_score":0.6254922,"about_ca_system_score_codex":0.00038414702,"about_ca_system_score_gemma":0.0021751267,"threshold_uncertainty_score":0.91086525},"labels":[],"label_agreement":null},{"id":"W2028195114","doi":"10.3201/eid1405.071675","title":"New Saffold Cardioviruses in 3 Children, Canada","year":2008,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Respiratory viral infections research","field":"Medicine","cited_by":88,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Centre hospitalier universitaire de Québec","funders":"","keywords":"Virology; Virus; Sequence (biology); Biology; Genetics","score_opus":0.01639479784726322,"score_gpt":0.2876917485628963,"score_spread":0.2712969507156331,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2028195114","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99136,0.0016745573,0.00009181743,0.00015211992,0.00023327635,0.00041447178,0.000017067521,0.00020051852,0.005856155],"genre_scores_gemma":[0.99759245,0.00020741085,0.000018750794,0.00060047826,0.00042652595,0.000040191127,0.00001781564,0.00003875655,0.0010576223],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9983575,0.000081115,0.00028656155,0.0003360863,0.0005046677,0.0004340972],"domain_scores_gemma":[0.9989927,0.000054564127,0.000045259672,0.00039453484,0.000085243955,0.0004277167],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000063312036,0.0001995243,0.00033597604,0.0003659505,0.00022521392,0.00001830417,0.00008868354,0.000055820256,0.00054507976],"category_scores_gemma":[0.000330912,0.00019539635,0.00013135759,0.0008094103,0.00006552189,0.0001475314,0.000054795186,0.00026112192,0.0000673255],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000030080277,0.000111366615,0.9558571,0.000017287002,0.000106945765,0.00020512241,0.000023927654,0.00050832983,0.000103842445,0.00002480659,0.039894197,0.0031170128],"study_design_scores_gemma":[0.001346103,0.00011973828,0.9824753,0.000037673224,0.000049088245,0.00036313193,0.000011962361,0.000017360237,0.0005771904,0.000022267726,0.014782197,0.00019801767],"about_ca_topic_score_codex":0.64751124,"about_ca_topic_score_gemma":0.20835266,"teacher_disagreement_score":0.43915856,"about_ca_system_score_codex":0.000562659,"about_ca_system_score_gemma":0.002471073,"threshold_uncertainty_score":0.80609286},"labels":[],"label_agreement":null},{"id":"W2030458962","doi":"10.3201/eid1912.131012","title":"Evaluation of 3 Electronic Methods Used to Detect Influenza Diagnoses during 2009 Pandemic","year":2013,"lang":"en","type":"letter","venue":"Emerging infectious diseases","topic":"Influenza Virus Research Studies","field":"Medicine","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Diagnosis code; Pharmacy; Pandemic; Medical diagnosis; Medicine; Oseltamivir; Medical prescription; Zanamivir; Infectious disease (medical specialty); Emergency medicine; Medical emergency; Database; Virology; Family medicine; Disease; Internal medicine; Coronavirus disease 2019 (COVID-19); Pathology; Environmental health; Computer science","score_opus":0.09655209320514911,"score_gpt":0.4473440631890483,"score_spread":0.35079196998389917,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2030458962","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.94833004,0.031084757,0.000280715,0.012594465,0.0006042907,0.005195354,0.00015997872,0.00078336836,0.0009670386],"genre_scores_gemma":[0.62614805,0.003908295,0.0012332288,0.33919796,0.013104219,0.012950957,0.00044547312,0.001129142,0.0018827],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99300873,0.0014143998,0.00087786745,0.00084521633,0.0025259063,0.0013278738],"domain_scores_gemma":[0.99539423,0.00096008216,0.00043086946,0.00096444425,0.0019829243,0.00026744837],"candidate_categories":["metaresearch","metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0016824015,0.00069026323,0.0012621268,0.0013276805,0.00029407683,0.000075615164,0.00028303577,0.0004830196,0.001014931],"category_scores_gemma":[0.009860177,0.00063335133,0.0005122771,0.0008783676,0.00017356407,0.0002053589,0.00026457457,0.0017019092,0.00021242053],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003349594,0.00038333068,0.22511284,0.004322246,0.0066747135,0.00012593654,0.0011299596,0.003540794,0.010315701,0.00000667628,0.6590843,0.08896849],"study_design_scores_gemma":[0.010626815,0.0022175757,0.2799216,0.0029938645,0.0130204875,0.000113848095,0.00012469849,0.00067460956,0.009052795,0.0021465158,0.67655706,0.0025501351],"about_ca_topic_score_codex":0.00066189887,"about_ca_topic_score_gemma":0.000068349604,"teacher_disagreement_score":0.32660347,"about_ca_system_score_codex":0.0016312836,"about_ca_system_score_gemma":0.0012888107,"threshold_uncertainty_score":0.99989825},"labels":[],"label_agreement":null},{"id":"W2031241196","doi":"10.3201/eid1204.051025","title":"Emerging Pediatric HIV Epidemic Related to Migration","year":2006,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"HIV/AIDS Research and Interventions","field":"Medicine","cited_by":24,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"McMaster University","funders":"","keywords":"Medicine; Incidence (geometry); Human immunodeficiency virus (HIV); Transmission (telecommunications); Immigration; Pediatrics; Family medicine","score_opus":0.007590920887692066,"score_gpt":0.30544596961602577,"score_spread":0.2978550487283337,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2031241196","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97488785,0.0014981643,0.0023740751,0.002997413,0.00017783207,0.0005023774,0.000040098374,0.00055226707,0.016969897],"genre_scores_gemma":[0.97617364,0.00015298257,0.000077860816,0.0001554853,0.00053120236,0.00010307706,0.00022524038,0.00004056468,0.022539977],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.998284,0.00009975993,0.00046504685,0.0003437833,0.0003469785,0.0004604554],"domain_scores_gemma":[0.99902,0.000081823,0.00008604052,0.00028777603,0.00017283273,0.0003515574],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00017339362,0.00018419824,0.00025285705,0.0006483483,0.00026494957,0.000042288495,0.00007992405,0.0000630141,0.0012232846],"category_scores_gemma":[0.0007267146,0.00017777031,0.00029830998,0.0009750708,0.00003129463,0.00018200472,0.000049066304,0.00021437829,0.00092107686],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000029848656,0.00036542353,0.7122521,0.00010215372,0.00004740503,0.000032030926,0.000084485284,0.0005771155,0.0007756867,0.00046433124,0.28157163,0.0036978417],"study_design_scores_gemma":[0.0035021743,0.0022830958,0.87239176,0.0004372664,0.0008510067,0.00012814606,0.00025879775,0.012608513,0.00055150676,0.0034061223,0.10272385,0.0008577429],"about_ca_topic_score_codex":0.0006303541,"about_ca_topic_score_gemma":0.00018006618,"teacher_disagreement_score":0.17884777,"about_ca_system_score_codex":0.00015062618,"about_ca_system_score_gemma":0.000094113995,"threshold_uncertainty_score":0.9998568},"labels":[],"label_agreement":null},{"id":"W2034328199","doi":"10.3201/eid0702.010210","title":"Preventing Infections in Non-Hospital Settings: Long-Term Care","year":2001,"lang":"en","type":"review","venue":"Emerging infectious diseases","topic":"Infection Control in Healthcare","field":"Medicine","cited_by":59,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba","funders":"","keywords":"Infection control; Long-term care; Medicine; Intensive care medicine; Outbreak; Population; Environmental health; Virology; Nursing","score_opus":0.01389681281450481,"score_gpt":0.35601357629746255,"score_spread":0.3421167634829577,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2034328199","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0023576345,0.98620725,0.00009407786,0.000075522235,0.0028779786,0.0043050637,0.00009954314,0.00084503123,0.0031378733],"genre_scores_gemma":[0.016356274,0.9780192,0.000014074012,0.000143376,0.0022236186,0.0016499494,0.00093941996,0.0002770298,0.0003770714],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99548846,0.00034117812,0.0015242734,0.0011218934,0.0004855307,0.0010386655],"domain_scores_gemma":[0.9969975,0.00036770388,0.0007989261,0.00088492286,0.0004710809,0.00047988901],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00022830267,0.0009844496,0.0026273883,0.0015554726,0.0004810742,0.0001207564,0.00019644557,0.00061875745,0.0004442843],"category_scores_gemma":[0.00094883237,0.000976693,0.0015159484,0.0019376515,0.000101970865,0.0002670029,0.00017681843,0.001495549,0.00023671637],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000006609054,0.0006455981,0.28117755,0.055551365,0.0003345009,0.00036604615,0.00026400137,0.000022238792,5.246646e-8,0.000009201193,0.0003836792,0.66123915],"study_design_scores_gemma":[0.0033550821,0.0011468792,0.03893153,0.1110524,0.0066572214,0.001494793,0.0002426134,0.000039024508,3.462791e-7,0.000024038873,0.83500797,0.002048134],"about_ca_topic_score_codex":0.0003764695,"about_ca_topic_score_gemma":0.00034490443,"teacher_disagreement_score":0.83462423,"about_ca_system_score_codex":0.0017816472,"about_ca_system_score_gemma":0.0010512028,"threshold_uncertainty_score":0.99926835},"labels":[],"label_agreement":null},{"id":"W2034419041","doi":"10.3201/eid1312.071034","title":"<i>Diphyllobothrium latum</i>Outbreak from Marinated Raw Perch, Lake Geneva, Switzerland","year":2007,"lang":"en","type":"letter","venue":"Emerging infectious diseases","topic":"Parasite Biology and Host Interactions","field":"Environmental Science","cited_by":22,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Outbreak; Perch; Fishery; Biology; Zoology; Geography; Fish <Actinopterygii>; Virology","score_opus":0.008146125441783473,"score_gpt":0.27825573961479205,"score_spread":0.2701096141730086,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2034419041","genre_codex":"empirical","genre_gemma":"commentary","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.65943736,0.0026847916,0.0009856456,0.10398435,0.013941607,0.0019123007,0.0043046745,0.002820496,0.20992875],"genre_scores_gemma":[0.21068045,0.00062006875,0.00016087049,0.7219713,0.01197564,0.00026785105,0.011178059,0.00033913113,0.042806637],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.997162,0.00020342003,0.00044790312,0.0009541161,0.00042520475,0.0008073721],"domain_scores_gemma":[0.9985027,0.00032281692,0.0002715247,0.00065985793,0.000030423824,0.00021268908],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00010964939,0.00061660295,0.0005065898,0.00018238065,0.00051887194,0.000095784046,0.00043215856,0.00082750607,0.019595785],"category_scores_gemma":[0.0000967304,0.00059469364,0.00038034294,0.0003627536,0.00036240625,0.00025099,0.00030898763,0.0015443738,0.004238378],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000023536384,0.00010599855,0.4684388,0.00001266121,0.00015014847,0.0002660504,0.000054751734,0.0001374402,0.00016264063,0.0000013437943,0.52958864,0.0010579567],"study_design_scores_gemma":[0.00031132612,0.000054381508,0.27499545,0.00003565033,0.00023021117,0.00003205346,0.000006718566,0.00004852933,0.000042484262,0.0001988277,0.7234954,0.00054898614],"about_ca_topic_score_codex":0.0045848973,"about_ca_topic_score_gemma":0.0045400728,"teacher_disagreement_score":0.6179869,"about_ca_system_score_codex":0.0002977618,"about_ca_system_score_gemma":0.000042053933,"threshold_uncertainty_score":0.9996504},"labels":[],"label_agreement":null},{"id":"W2034661529","doi":"10.3201/eid1312.070615","title":"Swine Influenza (H3N2) Infection in a Child and Possible Community Transmission, Canada","year":2007,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Influenza Virus Research Studies","field":"Medicine","cited_by":65,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Agriculture Food and Rural Development; Provincial Laboratory of Public Health; Alberta Health; University of Alberta","funders":"","keywords":"Transmission (telecommunications); Serology; Pandemic; Medicine; Hemagglutination assay; Virology; Virus; Influenza A virus; Veterinary medicine; Preparedness; Environmental health; Immunology; Coronavirus disease 2019 (COVID-19); Internal medicine; Antibody; Disease; Infectious disease (medical specialty)","score_opus":0.02507665751055514,"score_gpt":0.33713782191681424,"score_spread":0.3120611644062591,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2034661529","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9827434,0.0028658959,0.000083452964,0.00032680872,0.00011067568,0.0004411434,0.0000142926165,0.00016434368,0.01324998],"genre_scores_gemma":[0.9976847,0.0005153259,0.000020858033,0.0015165848,0.00011800972,0.000028013625,0.000014700472,0.000029290095,0.00007249351],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99830204,0.00014281155,0.0003872056,0.0002299274,0.0004025745,0.00053541147],"domain_scores_gemma":[0.9989115,0.00020985656,0.00006841857,0.0002832562,0.00016043088,0.00036651653],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00049739704,0.00023450065,0.00034901453,0.00041744686,0.00066894304,0.000027694829,0.00006127751,0.000071016366,0.000070493115],"category_scores_gemma":[0.00064432557,0.00021587807,0.000067536086,0.00068657513,0.00013275066,0.00015496556,0.00008472897,0.0006836627,0.0000040184073],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00025777327,0.00036885263,0.98811656,0.00034197496,0.00009289297,0.00008276606,0.0006254417,0.00009773764,0.00017111193,0.00006512498,0.00065387046,0.009125861],"study_design_scores_gemma":[0.002394432,0.0002133775,0.97526294,0.00032802802,0.00006981601,0.000074817544,0.0002655557,0.00007672879,0.00038620725,0.00012588725,0.020585243,0.00021695415],"about_ca_topic_score_codex":0.5763434,"about_ca_topic_score_gemma":0.54291815,"teacher_disagreement_score":0.033425283,"about_ca_system_score_codex":0.0004464116,"about_ca_system_score_gemma":0.00037127646,"threshold_uncertainty_score":0.8803252},"labels":[],"label_agreement":null},{"id":"W2036032722","doi":"10.3201/eid2003.131083","title":"Minimal Diversity of Drug-Resistant<i>Mycobacterium tuberculosis</i>Strains, South Africa1","year":2014,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Tuberculosis Research and Epidemiology","field":"Medicine","cited_by":41,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"National Institute of Allergy and Infectious Diseases; National Institutes of Health; Center for AIDS Research, University of Washington; Emory University; National Institute of Mental Health; Howard Hughes Medical Institute","keywords":"Mycobacterium tuberculosis; Tuberculosis; Extensively drug-resistant tuberculosis; Drug resistance; Multiple drug resistance; Beijing; Medicine; Incidence (geometry); Strain (injury); Virology; Biology; Microbiology; Internal medicine; Pathology; China","score_opus":0.0127755962022376,"score_gpt":0.2678039752396726,"score_spread":0.25502837903743497,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2036032722","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99057704,0.00042335296,0.00012895082,0.0011549119,0.00023636794,0.00025537654,0.0001234672,0.00021684013,0.0068836855],"genre_scores_gemma":[0.9985281,0.0001196518,0.000065105974,0.00059665134,0.00035405057,0.000020461466,0.00007095643,0.000028765433,0.0002162367],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99784803,0.00030836917,0.00040615542,0.0004320646,0.00040707397,0.0005982933],"domain_scores_gemma":[0.9984225,0.00026255686,0.00015483481,0.0004544159,0.00018800858,0.00051768735],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003912238,0.00024829322,0.0006208398,0.00026551296,0.0003017743,0.000014310004,0.00015632024,0.00009324051,0.00037892695],"category_scores_gemma":[0.0015215784,0.00022168036,0.00037443673,0.00032856333,0.0002598405,0.00010764529,0.000306163,0.00023188289,0.000070926304],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00030964456,0.0004424987,0.9812645,0.00040185705,0.00030850794,0.000020265616,0.0005850512,0.000032155847,0.0039491984,0.00029810215,0.01110039,0.001287868],"study_design_scores_gemma":[0.0017488572,0.00054612133,0.9888234,0.000111636335,0.0004489907,0.0000200418,0.00026623617,0.0002898767,0.00050105626,0.00028861538,0.006682412,0.00027274282],"about_ca_topic_score_codex":0.00046598163,"about_ca_topic_score_gemma":0.00005330492,"teacher_disagreement_score":0.007951073,"about_ca_system_score_codex":0.00009017783,"about_ca_system_score_gemma":0.00008817404,"threshold_uncertainty_score":0.9039862},"labels":[],"label_agreement":null},{"id":"W2036153303","doi":"10.3201/eid1912.130649","title":"Historical Prevalence and Distribution of Avian Influenza Virus A(H7N9) among Wild Birds","year":2013,"lang":"en","type":"review","venue":"Emerging infectious diseases","topic":"Influenza Virus Research Studies","field":"Medicine","cited_by":13,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Wildlife Conservation Society Canada","funders":"National Institute of Allergy and Infectious Diseases; National Institutes of Health; United States Agency for International Development; University of Wisconsin-Madison; U.S. Department of Health and Human Services","keywords":"Influenza A virus subtype H5N1; GenBank; Avian influenza virus; Virology; Veterinary medicine; Biology; Distribution (mathematics); Prevalence; Virus; Medicine; Environmental health; Genetics; Population","score_opus":0.05961114530842342,"score_gpt":0.3751945399131344,"score_spread":0.31558339460471097,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2036153303","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.007334318,0.9896981,0.000022799943,0.000015133673,0.00029511633,0.0017530656,0.000313323,0.00025980765,0.00030830308],"genre_scores_gemma":[0.0016041774,0.99673384,0.000010347624,0.000041148283,0.000348635,0.0005978415,0.000083034225,0.00009131343,0.0004896784],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9966709,0.0002623211,0.0010478891,0.0006798481,0.0007318836,0.0006071456],"domain_scores_gemma":[0.9975457,0.00034256984,0.0006048288,0.0006412345,0.0003870709,0.00047856075],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0002384761,0.0006512097,0.002255866,0.00045000712,0.0002798968,0.00004783064,0.0001912126,0.00030729122,0.00014567914],"category_scores_gemma":[0.002026021,0.00052546564,0.0006450392,0.00067307247,0.00047534995,0.00024390378,0.00032472252,0.0006499855,0.000060031598],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00005168195,0.0006828288,0.2808465,0.12717995,0.0013105965,0.00005881517,0.00013029839,0.000003485668,0.0000040223376,0.000093621165,0.010810385,0.5788278],"study_design_scores_gemma":[0.0005879805,0.00032898487,0.036986224,0.014605818,0.0031288378,0.000035544148,0.0000067073884,0.000007322891,0.0000027578812,0.000030267598,0.94378895,0.0004906227],"about_ca_topic_score_codex":0.0011702369,"about_ca_topic_score_gemma":0.000016938873,"teacher_disagreement_score":0.9329786,"about_ca_system_score_codex":0.0013197283,"about_ca_system_score_gemma":0.00039764293,"threshold_uncertainty_score":0.9997197},"labels":[],"label_agreement":null},{"id":"W2036176399","doi":"10.3201/eid1009.040170","title":"Toronto Emergency Medical Services and SARS","year":2004,"lang":"en","type":"letter","venue":"Emerging infectious diseases","topic":"Disaster Response and Management","field":"Health Professions","cited_by":24,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"North York General Hospital; McGill University; Health Sciences Centre; Associated Medical Services","funders":"","keywords":"Outbreak; Medicine; Christian ministry; China; Coronavirus disease 2019 (COVID-19); Medical emergency; Emergency medicine; Quarantine; Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2); Geography; Virology; Infectious disease (medical specialty); Disease","score_opus":0.01867982890050957,"score_gpt":0.3704155710653416,"score_spread":0.35173574216483205,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2036176399","genre_codex":"commentary","genre_gemma":"commentary","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"commentary","genre_consensus":"commentary","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.055651728,0.020200787,0.0003299647,0.6874144,0.018525682,0.0036883235,0.0004309178,0.002487162,0.211271],"genre_scores_gemma":[0.01899377,0.0066411225,0.000010750705,0.9334385,0.010052483,0.00084847194,0.00072221307,0.00021456908,0.029078163],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9965565,0.0005025549,0.0006767454,0.00064345164,0.00079231267,0.00082842464],"domain_scores_gemma":[0.9986139,0.00014282858,0.00031204487,0.00054732064,0.000092383554,0.00029150743],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00023551019,0.00046967695,0.00051794946,0.0001499676,0.000759022,0.000027546825,0.00033849463,0.0005504566,0.0130510405],"category_scores_gemma":[0.00010964344,0.00043012184,0.00018001081,0.00012361404,0.000063206775,0.00024590656,0.0004953498,0.0011701348,0.00046215954],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000020825235,0.000079391306,0.012601422,0.003650677,0.00024558458,0.0003025366,0.0022378634,0.0000016627366,5.021185e-7,0.00025933,0.97862977,0.0019704497],"study_design_scores_gemma":[0.00070455146,0.00005633769,0.004286841,0.0010424971,0.0002942569,0.000005060198,0.0008672835,0.000010791951,9.746022e-8,0.0016618248,0.9906195,0.00045097704],"about_ca_topic_score_codex":0.008986165,"about_ca_topic_score_gemma":0.00547205,"teacher_disagreement_score":0.24602401,"about_ca_system_score_codex":0.00040537777,"about_ca_system_score_gemma":0.00039036307,"threshold_uncertainty_score":0.99981505},"labels":[],"label_agreement":null},{"id":"W2036390843","doi":"10.3201/eid2005.131371","title":"Extensively Drug-Resistant<i>Streptococcus pneumoniae</i>, South Korea, 2011–2012","year":2014,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Pneumonia and Respiratory Infections","field":"Medicine","cited_by":20,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Asia Pacific Foundation of Canada","funders":"Samsung; Ministry of Education, Science and Technology; National Research Foundation of Korea; National Research Foundation","keywords":"Streptococcus pneumoniae; Pneumococcal infections; Medicine; Drug resistance; Drug; Antimicrobial; Antimicrobial drug; Microbiology; Multi drug resistant; Antibiotics; Intensive care medicine; Biology; Pharmacology","score_opus":0.007626068746898355,"score_gpt":0.24635448707585103,"score_spread":0.23872841832895267,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2036390843","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9758111,0.0006659769,0.00049463514,0.0019606112,0.001302873,0.0007228787,0.000080973885,0.0012838664,0.017677031],"genre_scores_gemma":[0.9932436,0.00005113766,0.000008265789,0.0027944553,0.0009096542,0.00016578852,0.0000396192,0.00008672314,0.0027007903],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9976792,0.00016160474,0.00046416008,0.00061198295,0.0004275368,0.000655524],"domain_scores_gemma":[0.9978926,0.00015217993,0.00021348649,0.0007066445,0.00040326876,0.00063179206],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00016445134,0.00042862736,0.00055259396,0.00036930977,0.000602321,0.00006916751,0.00013107386,0.00012002246,0.00079691113],"category_scores_gemma":[0.00043218042,0.00037720168,0.000426657,0.00035271578,0.00021324077,0.00023180245,0.000082043895,0.00034985386,0.00096946233],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000059670052,0.00085220544,0.9358068,0.00025475703,0.00034358024,0.00010729722,0.0004522201,0.00020643334,0.024418835,0.0006319271,0.030707557,0.006158686],"study_design_scores_gemma":[0.002498718,0.00052894553,0.7817071,0.00021155347,0.0008836246,0.00009104341,0.00023721151,0.0002495901,0.0006791355,0.0005487725,0.21159393,0.0007703546],"about_ca_topic_score_codex":0.000070028975,"about_ca_topic_score_gemma":0.000050026447,"teacher_disagreement_score":0.18088637,"about_ca_system_score_codex":0.0001180124,"about_ca_system_score_gemma":0.00018210387,"threshold_uncertainty_score":0.999868},"labels":[],"label_agreement":null},{"id":"W2037250782","doi":"10.3201/eid1508.081635","title":"Human-to-Dog Transmission of Methicillin-Resistant<i>Staphylococcus aureus</i>","year":2009,"lang":"en","type":"letter","venue":"Emerging infectious diseases","topic":"Antimicrobial Resistance in Staphylococcus","field":"Medicine","cited_by":78,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of Guelph","funders":"","keywords":"Medicine; Surgery; Clindamycin; Cellulitis; Vancomycin; Methicillin-resistant Staphylococcus aureus; Erythromycin; Staphylococcus aureus; Internal medicine; Antibiotics","score_opus":0.01473086706085032,"score_gpt":0.2983221354786598,"score_spread":0.2835912684178095,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2037250782","genre_codex":"commentary","genre_gemma":"commentary","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"commentary","genre_consensus":"commentary","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.20830625,0.02052495,0.009758533,0.6966648,0.0032283044,0.011433343,0.0032047068,0.004249684,0.04262943],"genre_scores_gemma":[0.3182493,0.0005966096,0.0010636253,0.6628508,0.006857406,0.0002258623,0.0012406878,0.0006374993,0.008278208],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99457884,0.00027098553,0.0013824838,0.0012625669,0.0013769973,0.0011281441],"domain_scores_gemma":[0.9964483,0.00027010398,0.00069027924,0.001390602,0.0006757859,0.00052496383],"candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.00026676172,0.0010845434,0.0019984473,0.001182477,0.00039869812,0.00006886082,0.0005094624,0.0011483865,0.0006483658],"category_scores_gemma":[0.00035379542,0.0010348114,0.0013026688,0.0011295513,0.00033404294,0.00011128801,0.00009256462,0.0023453536,0.00008755135],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00018361588,0.00045218563,0.0015355921,0.0022599194,0.000457066,0.0009394866,0.00016532578,0.00013726157,0.08578226,0.00003842138,0.90545,0.0025988603],"study_design_scores_gemma":[0.0017594196,0.0010992184,0.0068881684,0.0033216197,0.0020099415,0.000007988655,0.000025840014,0.000008791014,0.0069108745,0.0007011104,0.9760509,0.001216114],"about_ca_topic_score_codex":0.00025129036,"about_ca_topic_score_gemma":0.000020644677,"teacher_disagreement_score":0.10994303,"about_ca_system_score_codex":0.00039055553,"about_ca_system_score_gemma":0.00057398825,"threshold_uncertainty_score":0.99995625},"labels":[],"label_agreement":null},{"id":"W2037809088","doi":"10.3201/eid1909.121466","title":"Macrolide-Resistant<i>Mycoplasma pneumoniae</i>in Humans, Ontario, Canada, 2010–2011","year":2013,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Pneumonia and Respiratory Infections","field":"Medicine","cited_by":57,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Public Health Agency of Canada","funders":"","keywords":"Mycoplasma pneumoniae; 23S ribosomal RNA; Microbiology; Drug resistance; Virology; Biology; Mycoplasma; Streptococcus pneumoniae; Antibiotic resistance; Antibiotics; Medicine; Gene; Pneumonia; Genetics; Internal medicine","score_opus":0.006606911017480705,"score_gpt":0.21918423030440543,"score_spread":0.21257731928692472,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2037809088","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9843381,0.00030525896,0.000008967159,0.0013176204,0.0012225129,0.00061594346,0.000035751407,0.00025106248,0.01190477],"genre_scores_gemma":[0.99025184,0.000041613723,0.0000050715844,0.0017170059,0.00020291736,0.00025297757,0.00003455753,0.00005358111,0.0074404273],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9979344,0.00007305719,0.0004867326,0.00046604197,0.00038694314,0.0006527967],"domain_scores_gemma":[0.9986769,0.0000838915,0.00012293697,0.0004882572,0.00014802004,0.0004800052],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.000071894705,0.00034440777,0.00045473198,0.00029917245,0.00034746717,0.00006163864,0.00011748543,0.00010807819,0.00572058],"category_scores_gemma":[0.00007939875,0.00032119488,0.00018389571,0.00027403148,0.0000876465,0.0002125319,0.00005514545,0.00041489044,0.00042933048],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00001490656,0.00033149085,0.9500235,0.000074541924,0.00009033579,0.0001888507,0.00013951745,0.00013357068,0.005071871,0.00006849505,0.043359183,0.0005037529],"study_design_scores_gemma":[0.0011861676,0.0001747492,0.9256824,0.00010247087,0.00014097725,0.00011033199,0.0000822567,0.000043287826,0.00009704939,0.00017481846,0.07183714,0.00036832975],"about_ca_topic_score_codex":0.9544055,"about_ca_topic_score_gemma":0.980925,"teacher_disagreement_score":0.028477956,"about_ca_system_score_codex":0.0009609201,"about_ca_system_score_gemma":0.0014818495,"threshold_uncertainty_score":0.999924},"labels":[],"label_agreement":null},{"id":"W2037844266","doi":"10.3201/eid1301.061047","title":"Sapovirus in Water, Japan","year":2007,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Viral gastroenteritis research and epidemiology","field":"Medicine","cited_by":39,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hatch (Canada)","funders":"","keywords":"Sapovirus; Phylogenetic tree; Capsid; Wastewater; Biology; Virology; Genotype; Gene; Microbiology; Genetics; Virus","score_opus":0.013439292892178486,"score_gpt":0.3234443203427299,"score_spread":0.3100050274505514,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2037844266","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9938788,0.00043847188,0.0002862958,0.0003859784,0.00025527104,0.0001752279,0.0000036485603,0.00013739396,0.004438906],"genre_scores_gemma":[0.99840665,0.00014219801,0.00003090145,0.0007758931,0.0003238681,0.000016530797,0.00003939039,0.000017708328,0.0002468621],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9985541,0.000057954334,0.00027028628,0.00021862866,0.0001509723,0.00074802496],"domain_scores_gemma":[0.9994125,0.000027823538,0.000020948206,0.00017033367,0.000035090554,0.00033333467],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00034946887,0.00011611329,0.00025256947,0.00029289798,0.00006333634,0.000009569587,0.00005229228,0.000047435817,0.00034877082],"category_scores_gemma":[0.00038619307,0.00008954002,0.00010114723,0.00014971824,0.00007697314,0.00007023014,0.00004826505,0.00018652403,0.00017511069],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00023190865,0.000258186,0.97975403,0.000054134707,0.000026785903,0.00027684576,0.000065166605,0.000042221036,0.004798764,0.000048382226,0.0013307212,0.013112868],"study_design_scores_gemma":[0.0018256208,0.0004987768,0.98745066,0.00008805553,0.000021786924,0.0001331657,0.00008836712,0.00008871774,0.0009813916,0.00028396363,0.008427541,0.0001119724],"about_ca_topic_score_codex":0.0004104856,"about_ca_topic_score_gemma":0.0003149819,"teacher_disagreement_score":0.013000895,"about_ca_system_score_codex":0.00012337949,"about_ca_system_score_gemma":0.00002655168,"threshold_uncertainty_score":0.3818796},"labels":[],"label_agreement":null},{"id":"W2040550047","doi":"10.3201/eid1106.041052","title":"pVir and Bloody Diarrhea in<i>Campylobacter jejuni</i>Enteritis","year":2005,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Salmonella and Campylobacter epidemiology","field":"Agricultural and Biological Sciences","cited_by":66,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Provincial Laboratory of Public Health; Public Health Agency of Canada; University of Alberta Hospital; University of Alberta","funders":"Canadian Institutes of Health Research; Fondation pour la Recherche Médicale; Natural Sciences and Engineering Research Council of Canada; Alberta Heritage Foundation for Medical Research; Public Health Agency; Public Health Agency of Canada; University of Manitoba","keywords":"Campylobacter jejuni; Bloody diarrhea; Enteritis; Microbiology; Plasmid; Tetracycline; Diarrhea; Virulence; Bloody; Virology; Vomiting; Medicine; Biology; Antibiotics; Bacteria; Internal medicine; Gene","score_opus":0.006746898626257987,"score_gpt":0.21753055894417658,"score_spread":0.2107836603179186,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2040550047","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9948093,0.0013900165,0.0000021474361,0.0018639442,0.00017975435,0.00013305366,0.00003846132,0.00016537761,0.0014179322],"genre_scores_gemma":[0.99685186,0.0005732971,0.00001163409,0.0018576824,0.00051702245,0.00003436926,0.000044326913,0.0000019704446,0.00010781898],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9987323,0.0001462366,0.0002650225,0.00036800248,0.000093746894,0.000394671],"domain_scores_gemma":[0.9994537,0.0002018978,0.0000658571,0.000067478126,0.000024366971,0.00018667862],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012383323,0.00018511161,0.0002498567,0.00003117097,0.00014702526,0.00005066392,0.00011643656,0.0000855583,0.00069139624],"category_scores_gemma":[0.00012814625,0.0000887776,0.000089818255,0.00023322871,0.00008072868,0.00018933073,0.0000850975,0.000121079865,0.00005338611],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000014278939,0.00022462205,0.93073577,0.0000070078445,0.000011616671,0.0000101975465,0.000046432448,0.000013213978,0.0033894475,0.00014537887,0.001016798,0.064385235],"study_design_scores_gemma":[0.00028703612,0.00012888346,0.95141375,0.000026353324,0.0000189594,0.000033415923,0.000037796242,0.000056396668,0.00008343278,0.00069615553,0.046990238,0.00022757007],"about_ca_topic_score_codex":0.00034695314,"about_ca_topic_score_gemma":0.0016219676,"teacher_disagreement_score":0.064157665,"about_ca_system_score_codex":0.000030627638,"about_ca_system_score_gemma":0.0000061119163,"threshold_uncertainty_score":0.75703037},"labels":[],"label_agreement":null},{"id":"W2040943940","doi":"10.3201/eid0803.010190","title":"Molecular Epidemiology of Adenovirus Type 7 in the United States, 1966–20001","year":2002,"lang":"en","type":"review","venue":"Emerging infectious diseases","topic":"Virus-based gene therapy research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":147,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"Centers for Disease Control and Prevention","keywords":"Outbreak; Molecular epidemiology; Mastadenovirus; Genome; Virology; Epidemiology; Geography; Biology; Medicine; Genetics; Genotype; Adenoviridae; Gene","score_opus":0.04946745870362651,"score_gpt":0.37279626933418497,"score_spread":0.32332881063055846,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2040943940","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.015725495,0.9829806,0.000026855907,0.000037256923,0.00015529073,0.0006623431,0.00013816726,0.00002637563,0.00024763282],"genre_scores_gemma":[0.0055693104,0.9917575,0.00000647596,0.00040711497,0.00017872525,0.000150553,0.0017531037,0.00008842558,0.000088787776],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9959311,0.0019583458,0.0007364322,0.0005716802,0.00023233288,0.000570117],"domain_scores_gemma":[0.99815726,0.0002831546,0.00036301272,0.0009458456,0.00013122224,0.0001195193],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0006357242,0.00045870926,0.0010450894,0.00046217107,0.00008358208,0.000011307907,0.00065110874,0.00033700623,0.00014487808],"category_scores_gemma":[0.0007483598,0.00034710905,0.00048235268,0.0011195247,0.00021696079,0.0000030454241,0.00014215067,0.00041191588,0.000047486355],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0009371137,0.0028635387,0.012094783,0.016918898,0.0033007797,0.00035971717,0.0003036454,0.010332428,0.0002468058,0.00039940944,0.02310256,0.9291403],"study_design_scores_gemma":[0.0003975252,0.0014339251,0.00005700727,0.0007632791,0.00033443893,0.000038181613,0.000020379706,0.000052748794,0.00003628962,0.00010871416,0.9963248,0.00043275589],"about_ca_topic_score_codex":0.00021695856,"about_ca_topic_score_gemma":0.0001033397,"teacher_disagreement_score":0.9732222,"about_ca_system_score_codex":0.000060773196,"about_ca_system_score_gemma":0.00026068438,"threshold_uncertainty_score":0.9998981},"labels":[],"label_agreement":null},{"id":"W2042094306","doi":"10.3201/eid1108.050289a","title":"Epidemiology and Transmission Dynamics of West Nile Virus Disease","year":2005,"lang":"en","type":"review","venue":"Emerging infectious diseases","topic":"Mosquito-borne diseases and control","field":"Medicine","cited_by":877,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"Centers for Disease Control and Prevention","keywords":"Transmission (telecommunications); Disease; Epidemiology; Virology; West Nile virus; Medicine; Breastfeeding; Encephalitis; Virus; Pediatrics; Pathology","score_opus":0.023593721631102328,"score_gpt":0.3507611017339453,"score_spread":0.32716738010284296,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2042094306","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00016264632,0.996231,0.0005923236,0.0002138716,0.00023201137,0.0011337795,0.00086374383,0.00019063607,0.0003799837],"genre_scores_gemma":[0.004285344,0.99305433,0.000032421925,0.00024448888,0.0005849366,0.00023384695,0.0011041026,0.00011180033,0.00034873703],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9970587,0.00033757178,0.0010995023,0.0007458234,0.00023654562,0.00052185095],"domain_scores_gemma":[0.9971139,0.0005070363,0.0005616823,0.00063771167,0.000099871846,0.001079806],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00019973164,0.00063989556,0.0028323857,0.000350826,0.00015058983,0.000011144311,0.00014789352,0.0002531088,0.00076361257],"category_scores_gemma":[0.0005681072,0.0005133881,0.0012888443,0.00029424374,0.00021318064,0.000081605824,0.00007719184,0.00034380524,0.00002910582],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000109265464,0.00061437197,0.007845022,0.021878786,0.00042053135,0.000060235954,0.000010914942,0.000020935711,1.14674265e-7,0.0006319345,0.00065219257,0.9677557],"study_design_scores_gemma":[0.0012009719,0.00024846545,0.007023552,0.011290622,0.014020895,0.00006720318,0.000010368003,0.0016834676,5.4422618e-8,0.0002577333,0.9636127,0.00058399036],"about_ca_topic_score_codex":0.00013410897,"about_ca_topic_score_gemma":0.000032590953,"teacher_disagreement_score":0.9671717,"about_ca_system_score_codex":0.00017754105,"about_ca_system_score_gemma":0.0005710173,"threshold_uncertainty_score":0.9997318},"labels":[],"label_agreement":null},{"id":"W2042854314","doi":"10.3201/eid1506.081006","title":"Extensively Drug-Resistant <i>Acinetobacter baumannii</i>","year":2009,"lang":"en","type":"letter","venue":"Emerging infectious diseases","topic":"Antibiotic Resistance in Bacteria","field":"Biochemistry, Genetics and Molecular Biology","cited_by":98,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"National Institute of Allergy and Infectious Diseases; Chulalongkorn University","keywords":"Acinetobacter baumannii; Colistin; Tigecycline; Medicine; Antimicrobial; Ventilator-associated pneumonia; Pneumonia; Enterococcus faecium; Linezolid; Drug resistance; Vancomycin; Antibiotics; Microbiology; Internal medicine; Staphylococcus aureus; Pseudomonas aeruginosa; Biology","score_opus":0.0055179746652928964,"score_gpt":0.2310725478126583,"score_spread":0.2255545731473654,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2042854314","genre_codex":"empirical","genre_gemma":"commentary","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.7272176,0.016907588,0.0005995209,0.21716265,0.0069831805,0.0023959072,0.0018331495,0.0011031284,0.025797235],"genre_scores_gemma":[0.2527645,0.0013121822,0.000152764,0.69750875,0.01840591,0.00006809716,0.0061864355,0.00040808192,0.023193307],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9968404,0.00019231818,0.00055462215,0.0011605738,0.00041927196,0.0008328007],"domain_scores_gemma":[0.99796486,0.00003884076,0.0003980208,0.0011518449,0.00028308292,0.00016335247],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00008766113,0.00078419014,0.0006234687,0.00017714297,0.00025886673,0.00016706888,0.00047606812,0.00067065534,0.00017347182],"category_scores_gemma":[0.00018126264,0.00078280264,0.0005193875,0.00017131167,0.0002020493,0.000011599601,0.00016367619,0.0007006363,0.0001238054],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000072741466,0.000080648555,0.0063326857,0.00015735792,0.00022353334,0.0002880469,0.000012940449,0.000014864136,0.0068338327,0.0000066839516,0.9854348,0.0005419045],"study_design_scores_gemma":[0.00050903717,0.00019547378,0.019038174,0.00018680461,0.00026579297,0.00004286492,0.000012768481,0.0000024257383,0.0009062743,0.0001474329,0.97770756,0.0009854102],"about_ca_topic_score_codex":0.00005114341,"about_ca_topic_score_gemma":0.000032012893,"teacher_disagreement_score":0.48034608,"about_ca_system_score_codex":0.00008772617,"about_ca_system_score_gemma":0.00020769154,"threshold_uncertainty_score":0.9994623},"labels":[],"label_agreement":null},{"id":"W2044812014","doi":"10.3201/eid2105.141650","title":"Probable Toxic Cause for Suspected Lychee-Linked Viral Encephalitis","year":2015,"lang":"en","type":"letter","venue":"Emerging infectious diseases","topic":"Infectious Encephalopathies and Encephalitis","field":"Medicine","cited_by":13,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"B.C. Women's Hospital & Health Centre","funders":"","keywords":"Etiology; Outbreak; Encephalitis; Medicine; Virology; Ingestion; Biology; Internal medicine; Virus","score_opus":0.022100022970354374,"score_gpt":0.28295028180264986,"score_spread":0.2608502588322955,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2044812014","genre_codex":"commentary","genre_gemma":"commentary","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"commentary","genre_consensus":"commentary","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.20925075,0.022122907,0.0052218456,0.5380907,0.04046411,0.028936086,0.00890477,0.018589359,0.12841947],"genre_scores_gemma":[0.19696043,0.001694065,0.0009471874,0.63704735,0.05828199,0.0064464877,0.016127996,0.0014704304,0.08102408],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9949524,0.00019681212,0.00093034684,0.0013065016,0.0010087732,0.0016051655],"domain_scores_gemma":[0.99658114,0.00026599105,0.0004775833,0.0010555295,0.0010957881,0.00052399974],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00030349637,0.0010321946,0.0014648467,0.00061239867,0.0005603136,0.00021398687,0.0003071947,0.0010864142,0.0009782078],"category_scores_gemma":[0.0010429842,0.0010098931,0.0008474878,0.0006528203,0.00033605084,0.00031015667,0.0001324211,0.0015366224,0.00018264039],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012443654,0.00029067395,0.009610781,0.0015532472,0.00059515086,0.0012348945,0.0002706863,0.00004953264,0.000061491526,0.00019040586,0.98480386,0.0012148377],"study_design_scores_gemma":[0.0041230526,0.0015572923,0.00150369,0.0008265408,0.0021195838,0.0010152519,0.00009444794,0.00016726596,0.00006059797,0.0041896277,0.98292744,0.0014151859],"about_ca_topic_score_codex":0.0008934822,"about_ca_topic_score_gemma":0.00013030662,"teacher_disagreement_score":0.09895662,"about_ca_system_score_codex":0.0011253714,"about_ca_system_score_gemma":0.0012598448,"threshold_uncertainty_score":0.99993503},"labels":[],"label_agreement":null},{"id":"W2045099900","doi":"10.3201/eid1804.111627","title":"Comparison of<i>Escherichia coli</i>ST131 Pulsotypes, by Epidemiologic Traits, 1967–2009","year":2012,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Antibiotic Resistance in Bacteria","field":"Biochemistry, Genetics and Molecular Biology","cited_by":95,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba","funders":"Claude Pepper Older Americans Independence Center, Wake Forest School of Medicine; School of Medicine, University of Missouri; Universidade de Santiago de Compostela; Wake Forest University; University of South Dakota; University of Missouri; Creighton University; University of Minnesota; University of Pittsburgh; University of Texas MD Anderson Cancer Center; Northwestern University; University of Pennsylvania; Calgary Laboratory Services; University of Miami; U.S. Department of Veterans Affairs","keywords":"Escherichia coli; Biology; Antibiotic resistance; Pulsed-field gel electrophoresis; Antimicrobial; Multiple drug resistance; Drug resistance; Microbiology; Multi drug resistant; Antibiotics; Genotype; Genetics; Gene","score_opus":0.01348812288394427,"score_gpt":0.2969514280869764,"score_spread":0.2834633052030321,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2045099900","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9826481,0.0132102035,0.0015305569,0.00005069911,0.00042572222,0.00018324549,0.00012791484,0.000059719867,0.0017638562],"genre_scores_gemma":[0.99821043,0.0003605086,0.00023710668,0.00025864856,0.00036030854,0.000014166051,0.00025396966,0.000034243785,0.00027062002],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9984749,0.00018426275,0.0004276005,0.00030527197,0.00013460765,0.0004733811],"domain_scores_gemma":[0.9991263,0.000040978033,0.00026843243,0.0003009147,0.000065221866,0.00019814045],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00019987472,0.00024363959,0.00038904478,0.00003986304,0.00011978111,0.000015134171,0.00018782551,0.00016038913,0.00012948675],"category_scores_gemma":[0.00037370814,0.00023089105,0.00017272102,0.00014798972,0.00015581504,0.000012829196,0.00007499,0.00010653674,0.000021928096],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000048432077,0.00041991976,0.7818558,0.00004915069,0.00006965435,3.5525426e-7,0.000031115414,0.000064226115,0.17702523,0.00012510625,0.039545096,0.00076589215],"study_design_scores_gemma":[0.0006974489,0.00042711815,0.7881149,0.00005143411,0.00019605608,0.000006480117,0.00012862342,0.000063029795,0.06062814,0.00011924547,0.14890033,0.00066718285],"about_ca_topic_score_codex":0.000039012095,"about_ca_topic_score_gemma":0.000009612849,"teacher_disagreement_score":0.1163971,"about_ca_system_score_codex":0.000023804538,"about_ca_system_score_gemma":0.00005060951,"threshold_uncertainty_score":0.9415464},"labels":[],"label_agreement":null},{"id":"W2045640660","doi":"10.3201/eid1012.040961","title":"Human Illness from Avian Influenza H7N3, British Columbia","year":2004,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Influenza Virus Research Studies","field":"Medicine","cited_by":380,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Canadian Food Inspection Agency; Fraser Health; BC Centre for Disease Control; Hospital for Sick Children; BC Cancer Agency; Health Canada","funders":"","keywords":"Influenza A virus subtype H5N1; Highly pathogenic; Outbreak; Human mortality from H5N1; Pandemic; Transmission and infection of H5N1; Virology; Avian influenza virus; Biosecurity; Influenza A virus; Geography; Medicine; Coronavirus disease 2019 (COVID-19); Veterinary medicine; Virus; Disease; Infectious disease (medical specialty); Pathology","score_opus":0.02546825274222034,"score_gpt":0.33488750353704655,"score_spread":0.3094192507948262,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2045640660","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9909642,0.0026418443,0.000048284503,0.00012839497,0.000314468,0.00057905546,0.00022505914,0.00074466266,0.004354041],"genre_scores_gemma":[0.99609417,0.00012311236,0.000048468926,0.0020130763,0.00063437386,0.0001731952,0.0000772467,0.000075685406,0.0007606618],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9976731,0.00006499952,0.0004149873,0.00054655224,0.0006345167,0.0006658743],"domain_scores_gemma":[0.99860865,0.000058217305,0.0001063068,0.0004934457,0.00028927476,0.00044411008],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00010169005,0.0002334593,0.00049646763,0.00012947492,0.0011232598,0.00036630465,0.00015855195,0.00010444174,0.0015879879],"category_scores_gemma":[0.00060906104,0.00033910203,0.0002482062,0.00043742833,0.00041446378,0.00025174452,0.00018355165,0.00034870542,0.0002536948],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000037285983,0.0007881558,0.9774594,0.00015687465,0.0004946515,0.00053877546,0.0005573823,0.00026118386,0.0007626427,0.0000740125,0.009364511,0.009505177],"study_design_scores_gemma":[0.0051173884,0.00026613232,0.9644509,0.00048961426,0.00027447782,0.000042593783,0.00025288534,0.000006157455,0.00013032531,0.003443872,0.025044303,0.00048134214],"about_ca_topic_score_codex":0.14664207,"about_ca_topic_score_gemma":0.037113793,"teacher_disagreement_score":0.10952828,"about_ca_system_score_codex":0.00039826747,"about_ca_system_score_gemma":0.00022274659,"threshold_uncertainty_score":0.9999061},"labels":[],"label_agreement":null},{"id":"W2045779040","doi":"10.3201/eid1201.050914","title":"H5N1 Avian Influenza, Kampot Province, Cambodia","year":2006,"lang":"en","type":"letter","venue":"Emerging infectious diseases","topic":"Viral Infections and Vectors","field":"Medicine","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Comunidad de Madrid; World Health Organization","keywords":"Influenza A virus subtype H5N1; Geography; Socioeconomics; Vietnamese; Public health; Flock; Rural area; Christian ministry; Culling; Environmental protection; Medicine; Environmental health; Veterinary medicine; Political science; Virology","score_opus":0.011742036160208183,"score_gpt":0.2704958869551441,"score_spread":0.2587538507949359,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2045779040","genre_codex":"empirical","genre_gemma":"commentary","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"commentary","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.4619287,0.0083115455,0.0006415527,0.28098747,0.014443992,0.008080742,0.0022280382,0.010908694,0.21246928],"genre_scores_gemma":[0.21173315,0.000104108585,0.00005817418,0.72490513,0.022247234,0.0005313014,0.0036222984,0.00058825454,0.03621033],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9968051,0.00012481003,0.0006894724,0.00087178574,0.0006148096,0.00089405716],"domain_scores_gemma":[0.9981615,0.00009852814,0.00034686402,0.0008879834,0.00023512714,0.00027000933],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00008280164,0.0007959225,0.00093832525,0.0008636584,0.00044999534,0.00015894003,0.00016856431,0.00077796454,0.0011187727],"category_scores_gemma":[0.00013129011,0.00074202317,0.0007489021,0.0005934126,0.00020677455,0.00021164503,0.000099684345,0.0019204803,0.0006785712],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000012910363,0.00024351067,0.23720954,0.0005376885,0.00024446298,0.0006654208,0.00001403556,0.000049735383,0.000015706153,0.000022394248,0.7601274,0.00085716735],"study_design_scores_gemma":[0.0010720068,0.00036880205,0.056403764,0.00038695964,0.0011325667,0.00014460305,0.0000059071563,0.00004407519,0.000025069507,0.00019606398,0.9394299,0.0007903067],"about_ca_topic_score_codex":0.0021779146,"about_ca_topic_score_gemma":0.00021854282,"teacher_disagreement_score":0.4439177,"about_ca_system_score_codex":0.00050472724,"about_ca_system_score_gemma":0.0005831954,"threshold_uncertainty_score":0.99979436},"labels":[],"label_agreement":null},{"id":"W2048794495","doi":"10.3201/eid1804.111267","title":"Malaria in Highlands of Ecuador since 1900","year":2012,"lang":"en","type":"review","venue":"Emerging infectious diseases","topic":"Mosquito-borne diseases and control","field":"Medicine","cited_by":17,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Brock University","funders":"Directorate for Biological Sciences; Brock University; Natural Sciences and Engineering Research Council of Canada; International Development Research Centre","keywords":"Malaria; Geography; Context (archaeology); Vector (molecular biology); Anopheles; Distribution (mathematics); Central Highlands; Habitat; Ecology; Environmental protection; Socioeconomics; Biology; Archaeology; Immunology","score_opus":0.019162299711597334,"score_gpt":0.3153097888032149,"score_spread":0.2961474890916176,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2048794495","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0005608894,0.99575585,0.000011403484,0.00003788755,0.00057994475,0.0010417593,0.00022313764,0.00014374951,0.0016453777],"genre_scores_gemma":[0.102605246,0.8955195,0.0000072291086,0.000077041346,0.00076589745,0.0002833028,0.0003554758,0.00009890578,0.00028743592],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9975473,0.00016326766,0.0008844597,0.00049075286,0.00035982288,0.0005543833],"domain_scores_gemma":[0.9981801,0.00016825744,0.00046671566,0.000689485,0.00009287906,0.00040256],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00014611597,0.00054601,0.0022830854,0.0005151196,0.000060398233,0.0000223261,0.0001811479,0.00024709417,0.0006975766],"category_scores_gemma":[0.00018164671,0.00044902484,0.0010674108,0.0006016483,0.00007731278,0.00010290977,0.00009741635,0.00034500618,0.000085900145],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008085732,0.0014508829,0.036524724,0.040084727,0.00074074167,0.00017884771,0.000035236644,0.0000049919818,6.725105e-7,0.0005719745,0.0006355353,0.9196908],"study_design_scores_gemma":[0.0018635477,0.00021263174,0.017657777,0.016307002,0.012470614,0.00007605803,0.00001768013,0.000024925535,6.889279e-7,0.000041103336,0.9506895,0.0006385055],"about_ca_topic_score_codex":0.00016989662,"about_ca_topic_score_gemma":0.000024532295,"teacher_disagreement_score":0.95005393,"about_ca_system_score_codex":0.0001819029,"about_ca_system_score_gemma":0.00049111317,"threshold_uncertainty_score":0.99979615},"labels":[],"label_agreement":null},{"id":"W2051160985","doi":"10.3201/eid0810.020356","title":"<i>Bacillus anthracis</i>Aerosolization Associated with a Contaminated Mail Sorting Machine","year":2002,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Bacillus and Francisella bacterial research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":58,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Defence Research and Development Canada","funders":"Centers for Disease Control and Prevention","keywords":"Bacillus anthracis; Aerosolization; Spore; Sorting; Microbiology; Contamination; Medicine; Biology; Bacteria; Computer science; Inhalation; Anesthesia","score_opus":0.008897699714975739,"score_gpt":0.229175873551036,"score_spread":0.22027817383606027,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2051160985","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9918575,0.0016010769,0.0017745215,0.000065241045,0.00018181649,0.0002600267,0.00010247857,0.00011097564,0.004046319],"genre_scores_gemma":[0.99726224,0.00033793965,0.000010285448,0.00014512472,0.00016367513,0.000039645973,0.00041212342,0.00004531366,0.0015836306],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9986299,0.000105057516,0.0002288298,0.00038206764,0.00023287564,0.00042126418],"domain_scores_gemma":[0.99921966,0.000024555362,0.00013315582,0.00025439545,0.0002051164,0.00016312656],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00010919253,0.00021681521,0.0001989501,0.000067456385,0.00031006217,0.00007435167,0.00011559678,0.00011045702,0.00048190381],"category_scores_gemma":[0.0004489899,0.00019167809,0.00008621109,0.00027947943,0.000110252724,0.0000127546255,0.00006954349,0.00010493704,0.000030243948],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000527472,0.0020078497,0.55236506,0.00016184636,0.00093634875,0.00012118281,0.00046256644,0.0016524701,0.3924175,0.00015328475,0.009372928,0.039821494],"study_design_scores_gemma":[0.04910722,0.014283874,0.4562004,0.0013902099,0.0017836203,0.00048077,0.00063915586,0.0778928,0.22332726,0.0006402037,0.16420451,0.010049975],"about_ca_topic_score_codex":0.000058681813,"about_ca_topic_score_gemma":0.00019017467,"teacher_disagreement_score":0.16909023,"about_ca_system_score_codex":0.0000400886,"about_ca_system_score_gemma":0.000030598185,"threshold_uncertainty_score":0.7816405},"labels":[],"label_agreement":null},{"id":"W2054754458","doi":"10.3201/eid1206.051675","title":"Human Parechovirus Infections in Canada","year":2006,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Viral Infections and Immunology Research","field":"Medicine","cited_by":125,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Université Laval; Centre hospitalier universitaire de Québec","funders":"Université Laval","keywords":"Virology; Enterovirus; Sepsis; Pneumonia; Septic shock; Biology; Medicine; Astrovirus; Internal medicine; Rotavirus; Virus","score_opus":0.010445400686567588,"score_gpt":0.2878144946620918,"score_spread":0.27736909397552423,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2054754458","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97809476,0.0007136933,0.000028085973,0.00027824414,0.0002747627,0.00024742412,0.000014981457,0.00015480726,0.020193232],"genre_scores_gemma":[0.99855167,0.000045139182,0.0000037613079,0.00015849751,0.00016018418,0.00010239274,0.000047645895,0.000022868295,0.00090786384],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9988535,0.00006474697,0.00027602637,0.00023900236,0.00017851144,0.00038820537],"domain_scores_gemma":[0.999482,0.000039258855,0.00004654035,0.0002489716,0.00008407523,0.00009918113],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000061783445,0.0001490186,0.00023635334,0.0003479741,0.00030265603,0.000023669712,0.000049172402,0.000051371768,0.00058346934],"category_scores_gemma":[0.000078617566,0.0001471071,0.00008623638,0.00063893804,0.00006822716,0.00010943456,0.000039018745,0.0003039368,0.00004206975],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000008724263,0.00043935713,0.9901311,0.000024997602,0.000036626225,0.000067606736,0.0000063935186,0.0005555427,0.0008801734,0.0004125926,0.006094178,0.0013427087],"study_design_scores_gemma":[0.0011886406,0.00017511669,0.9846421,0.00004419853,0.000047323378,0.00007033755,0.000051557206,0.00010990004,0.00018073608,0.00047146462,0.012851324,0.00016732814],"about_ca_topic_score_codex":0.9576634,"about_ca_topic_score_gemma":0.94569445,"teacher_disagreement_score":0.020456878,"about_ca_system_score_codex":0.0008898784,"about_ca_system_score_gemma":0.00086510205,"threshold_uncertainty_score":0.638858},"labels":[],"label_agreement":null},{"id":"W2055592199","doi":"10.3201/eid1808.111779","title":"Chloroquine-Resistant Malaria in Travelers Returning from Haiti after 2010 Earthquake","year":2012,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Malaria Research and Control","field":"Medicine","cited_by":27,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"École des Hautes Études en Santé Publique","keywords":"Malaria; Chloroquine; Virology; Proguanil; Medicine; Geography; Immunology","score_opus":0.009439184969839401,"score_gpt":0.2532742667202792,"score_spread":0.2438350817504398,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2055592199","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9907584,0.0034649305,0.00013345579,0.0016512283,0.0005440961,0.00046961365,0.00007443247,0.00017666168,0.002727148],"genre_scores_gemma":[0.9972376,0.00006701554,0.00004860203,0.0004965506,0.0008671136,0.00019586488,0.000076385244,0.000045646077,0.0009652281],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9979955,0.00012425492,0.00033079827,0.00031734534,0.0004249643,0.0008071494],"domain_scores_gemma":[0.99875253,0.00013182535,0.00006936034,0.00036121585,0.00007070339,0.00061433413],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00023082121,0.0002413733,0.00037749563,0.00027796056,0.000101458456,0.000053923235,0.00008283147,0.00010704277,0.0036232595],"category_scores_gemma":[0.00045355211,0.00021952875,0.00019061999,0.0002891145,0.00007298123,0.00027010907,0.000051788094,0.00040678008,0.00016327806],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0015564761,0.0005656589,0.98747337,0.00008547986,0.00018125527,0.00023498703,0.00049557665,0.000023031998,0.0031806643,0.0004358419,0.0016332825,0.0041343695],"study_design_scores_gemma":[0.0028886471,0.00015141498,0.992176,0.00016049897,0.0001468266,0.000012037124,0.00013357053,0.00034965717,0.00016350944,0.00013573363,0.00344605,0.000236066],"about_ca_topic_score_codex":0.0012366378,"about_ca_topic_score_gemma":0.00040201552,"teacher_disagreement_score":0.0064791604,"about_ca_system_score_codex":0.00012089703,"about_ca_system_score_gemma":0.0001269624,"threshold_uncertainty_score":0.9972876},"labels":[],"label_agreement":null},{"id":"W2056993639","doi":"10.3201/eid1805.110602","title":"A Spatial Analysis of Individual- and Neighborhood-Level Determinants of Malaria Incidence in Adults, Ontario, Canada","year":2012,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Malaria Research and Control","field":"Medicine","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Sante Montreal; University of Toronto; McGill University","funders":"","keywords":"Malaria; Incidence (geometry); Context (archaeology); Geography; Environmental health; Demography; Medicine; Immunology","score_opus":0.010427937962845368,"score_gpt":0.2608689765749895,"score_spread":0.2504410386121441,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2056993639","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9985201,0.0006072167,0.000074589894,0.00006614236,0.00007128404,0.00025228268,0.00012354858,0.000009197843,0.0002756484],"genre_scores_gemma":[0.99973464,0.000028417107,0.000018084458,0.00006565909,0.000042502346,0.00002827545,0.000032116895,0.000008884596,0.000041397016],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9986072,0.000067405526,0.00036253667,0.00017077701,0.0004577675,0.00033430356],"domain_scores_gemma":[0.999119,0.00012375943,0.00015411279,0.00021257374,0.00011006323,0.00028050042],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00018956873,0.0001286122,0.00049994065,0.00041628664,0.000036743586,0.0000071844984,0.000076633,0.000045747165,0.0005120803],"category_scores_gemma":[0.00046854277,0.00011758497,0.00009150278,0.00053005386,0.000057069436,0.000109924134,0.00007601956,0.00013153812,3.5871022e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00024481406,0.00025564845,0.9925885,0.00015511988,0.00046531923,0.00002311672,0.00051156746,0.000021626694,0.000042855747,0.000099978446,0.000049136324,0.0055423183],"study_design_scores_gemma":[0.0014824498,0.00013145499,0.99563247,0.00014428496,0.0010540264,0.0000063696484,0.00009773477,0.0012218215,0.000091721304,0.000019257488,0.000018605133,0.00009978709],"about_ca_topic_score_codex":0.95286775,"about_ca_topic_score_gemma":0.98529625,"teacher_disagreement_score":0.032428544,"about_ca_system_score_codex":0.00014655833,"about_ca_system_score_gemma":0.0009088181,"threshold_uncertainty_score":0.5606921},"labels":[],"label_agreement":null},{"id":"W2057694903","doi":"10.3201/eid1712.110609","title":"Lineage and Virulence of<i>Streptococcus suis</i>Serotype 2 Isolates from North America","year":2011,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Streptococcal Infections and Treatments","field":"Medicine","cited_by":106,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Cegep de Saint Hyacinthe","funders":"Canadian Institutes of Health Research","keywords":"Pilus; Streptococcus suis; Virulence; Microbiology; Multilocus sequence typing; Biology; Serotype; Virulence factor; Typing; Streptococcus agalactiae; Virology; Genetics; Bacteria; Streptococcus; Gene; Genotype","score_opus":0.015495052367843608,"score_gpt":0.2507981561775097,"score_spread":0.23530310380966613,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2057694903","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9951005,0.0009313222,0.00022655407,0.000014249157,0.00017270847,0.00041129862,0.00012611624,0.0002047849,0.002812464],"genre_scores_gemma":[0.9990009,0.00034457815,0.00017594939,0.00009375213,0.00010307489,0.000092405455,0.000074668176,0.000025747384,0.00008889857],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99904907,0.00003114408,0.00026884928,0.0003281109,0.00010591828,0.00021691408],"domain_scores_gemma":[0.99914384,0.000082207815,0.00013779732,0.0003148726,0.000101371625,0.0002199079],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.000016376374,0.0002091834,0.00033268784,0.00012823334,0.00012310108,0.000012991378,0.000048051028,0.00004917693,0.00093390874],"category_scores_gemma":[0.0000958311,0.00017935352,0.00013493166,0.00029398667,0.00016319298,0.00011637396,0.000055843677,0.00010584971,0.0000585117],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007285966,0.00067045365,0.9904171,0.000038154823,0.00027552966,0.00002504279,0.0002780292,0.00000676647,0.00031205965,0.000018690664,0.00014055462,0.0077447128],"study_design_scores_gemma":[0.0010363457,0.00058389554,0.9940645,0.0000895824,0.00046725437,0.0000080255795,0.00006577039,0.00012276213,0.0021493419,0.0001470251,0.0010947813,0.00017069261],"about_ca_topic_score_codex":0.0028054635,"about_ca_topic_score_gemma":0.00010292312,"teacher_disagreement_score":0.0075740204,"about_ca_system_score_codex":0.000027863653,"about_ca_system_score_gemma":0.00004666728,"threshold_uncertainty_score":0.9999794},"labels":[],"label_agreement":null},{"id":"W2058362926","doi":"10.3201/eid1806.111420","title":"Detection of European Strain of<i>Echinococcus multilocularis</i>in North America","year":2012,"lang":"en","type":"letter","venue":"Emerging infectious diseases","topic":"Parasitic infections in humans and animals","field":"Medicine","cited_by":75,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Echinococcus multilocularis; Strain (injury); Virology; Biology; Echinococcosis; Geography; Veterinary medicine; Zoology; Medicine","score_opus":0.01322109783412744,"score_gpt":0.2691773470299227,"score_spread":0.25595624919579524,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2058362926","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9681361,0.0035149814,0.0034599632,0.0036124773,0.0018535008,0.0016282345,0.0008926092,0.00048622524,0.016415924],"genre_scores_gemma":[0.9872259,0.0001518029,0.00006111069,0.009962905,0.0019767343,0.000039825678,0.00032359408,0.000099128665,0.00015900962],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9977417,0.0002902754,0.0007621088,0.00038509525,0.0003641512,0.00045668153],"domain_scores_gemma":[0.9985631,0.00012291924,0.0005279968,0.0005150741,0.00016706336,0.00010385489],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00015863356,0.0003897909,0.00081402494,0.0007341895,0.00009533741,0.000012706224,0.00012048353,0.00020885603,0.00021149893],"category_scores_gemma":[0.00020417545,0.0003816642,0.00047331018,0.00054759555,0.00021889326,0.00009484344,0.00005436389,0.0009924206,0.000040620245],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014432635,0.0024247637,0.87882733,0.00552993,0.0011965011,0.0008400111,0.0011522064,0.0007107649,0.009246896,0.000022733746,0.030047221,0.0698573],"study_design_scores_gemma":[0.0018893979,0.00071916415,0.727839,0.00089354033,0.0015323202,0.00012061387,0.00006883972,0.00016570369,0.0007200865,0.000043807027,0.26523554,0.0007720027],"about_ca_topic_score_codex":0.0004973065,"about_ca_topic_score_gemma":0.00007692883,"teacher_disagreement_score":0.23518832,"about_ca_system_score_codex":0.00012567661,"about_ca_system_score_gemma":0.000087806,"threshold_uncertainty_score":0.9998635},"labels":[],"label_agreement":null},{"id":"W2058398503","doi":"10.3201/eid1104.040648","title":"Patient Contact Recall after SARS Exposure","year":2005,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"COVID-19 and Mental Health","field":"Psychology","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Medicine; Intensive care unit; Infection control; Health care; Recall; Healthcare worker; Intensive care medicine; Emergency medicine; Psychology","score_opus":0.01733439610888871,"score_gpt":0.3430274770288416,"score_spread":0.3256930809199529,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2058398503","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9837723,0.0027389647,0.0000737035,0.00057737634,0.0014623532,0.0003228965,0.000060089966,0.00031981405,0.010672496],"genre_scores_gemma":[0.99341714,0.00005935762,0.000015312855,0.0049123485,0.00043946996,0.00021178277,0.000022916603,0.00003289674,0.0008887465],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9986731,0.00011131025,0.00027687888,0.00035099481,0.00016685948,0.00042087646],"domain_scores_gemma":[0.9992338,0.00007914985,0.00008304079,0.00032917777,0.000033548164,0.00024127483],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00005631108,0.00018616782,0.00018097168,0.00011714407,0.00013879666,0.000023054212,0.00006820163,0.000068322086,0.0040158406],"category_scores_gemma":[0.000030272442,0.00018027004,0.00013991722,0.00014411515,0.000030405365,0.00010759882,0.000041242118,0.00013640229,0.0008893481],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00032185807,0.0012336009,0.77867544,0.00007131985,0.00009610371,0.00008295489,0.0033520113,0.0000459971,0.000058568578,0.00060817326,0.026761308,0.18869267],"study_design_scores_gemma":[0.0012605076,0.0006261569,0.5838159,0.00005348763,0.00006791475,0.000020279278,0.00028295725,0.000017567174,0.000049851165,0.00013777197,0.41334572,0.00032192722],"about_ca_topic_score_codex":0.0007393341,"about_ca_topic_score_gemma":0.00043029236,"teacher_disagreement_score":0.38658443,"about_ca_system_score_codex":0.000317518,"about_ca_system_score_gemma":0.0000958287,"threshold_uncertainty_score":0.9998886},"labels":[],"label_agreement":null},{"id":"W2059231004","doi":"10.3201/eid1303.060447","title":"Population-based Laboratory Surveillance for AmpC β-Lactamase–producing Escherichia coli, Calgary","year":2007,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Antibiotic Resistance in Bacteria","field":"Biochemistry, Genetics and Molecular Biology","cited_by":72,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of Calgary","funders":"Calgary Laboratory Services","keywords":"Cefoxitin; Escherichia coli; Microbiology; Multiplex polymerase chain reaction; Biology; Population; Polymerase chain reaction; Medicine; Bacteria; Gene; Staphylococcus aureus; Genetics","score_opus":0.004779874652356063,"score_gpt":0.2501968787485438,"score_spread":0.24541700409618772,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2059231004","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97935015,0.00059044367,0.018654332,0.000043708966,0.0006139995,0.0003456388,0.000101631726,0.00010373581,0.00019633526],"genre_scores_gemma":[0.9973638,0.000020299125,0.0008231246,0.00041796744,0.00060943124,0.000022951896,0.00056473166,0.000054251188,0.0001234186],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99866414,0.00005901383,0.00029131083,0.00047074602,0.00013490785,0.0003798544],"domain_scores_gemma":[0.99902755,0.00008018352,0.00016086783,0.00041213454,0.00018250757,0.00013676245],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00030864822,0.000211337,0.00019699126,0.00006722931,0.00022878684,0.00004185534,0.00012030096,0.00011061841,0.000029557787],"category_scores_gemma":[0.0006132174,0.00022789299,0.0001234694,0.00019422444,0.000056511257,0.00000863757,0.000031242726,0.00006417537,0.0000044851186],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00016920376,0.00010696477,0.92161214,0.00009068124,0.00004724837,0.000003163291,0.000009761045,0.00039416453,0.07551133,0.000043084234,0.0015366069,0.00047562423],"study_design_scores_gemma":[0.0006925931,0.00012528701,0.97243226,0.000029090314,0.000030416923,8.5390144e-7,0.000019275441,0.00017923313,0.0160143,0.000039293653,0.010075635,0.00036173905],"about_ca_topic_score_codex":0.00011131416,"about_ca_topic_score_gemma":0.00031441048,"teacher_disagreement_score":0.059497025,"about_ca_system_score_codex":0.000060721788,"about_ca_system_score_gemma":0.00014581128,"threshold_uncertainty_score":0.92932063},"labels":[],"label_agreement":null},{"id":"W2060207865","doi":"10.3201/eid1611.091226","title":"<i>Mycobacterium heckeshornense</i>Infection in HIV-infected Patient","year":2010,"lang":"en","type":"letter","venue":"Emerging infectious diseases","topic":"Mycobacterium research and diagnosis","field":"Medicine","cited_by":12,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Virology; Human immunodeficiency virus (HIV); Mycobacterium avium complex; Microbiology; Medicine; Coinfection; Mycobacterium Infections; AIDS-Related Opportunistic Infections; Biology; Mycobacterium; Tuberculosis; Sida; Viral disease; Pathology","score_opus":0.009656720256022506,"score_gpt":0.2610595223918888,"score_spread":0.2514028021358663,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2060207865","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8546141,0.0007447588,0.000028887085,0.12999544,0.003704773,0.0021530513,0.0005837952,0.0012776025,0.006897595],"genre_scores_gemma":[0.5344363,0.0029898158,0.00007442643,0.43514866,0.01370337,0.0017444231,0.009741153,0.00057199615,0.0015898679],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99528223,0.000309331,0.00086310954,0.0011514145,0.0009954233,0.0013984848],"domain_scores_gemma":[0.9972666,0.00035246546,0.0003396093,0.0010842575,0.00040468655,0.0005523646],"candidate_categories":["metaepi_narrow","research_integrity","insufficient_payload"],"consensus_categories":["research_integrity"],"category_scores_codex":[0.00015663354,0.00088373787,0.001163647,0.0014059006,0.00022035869,0.00019673501,0.0001684047,0.0018176879,0.0027905083],"category_scores_gemma":[0.0011008271,0.0008554688,0.0006827253,0.0009517347,0.0001813476,0.00027170035,0.0001913119,0.00618949,0.0007278494],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009403289,0.0004542417,0.44057152,0.0006854275,0.0001252451,0.001494344,0.000047409372,0.0000047020285,0.0003484349,0.0000029352468,0.5549238,0.0012478998],"study_design_scores_gemma":[0.0016577943,0.000603147,0.24188623,0.0006560276,0.00040939808,0.00031336464,0.0000046725104,0.00004173425,0.00030734364,0.00007680549,0.75325316,0.00079033716],"about_ca_topic_score_codex":0.0016308557,"about_ca_topic_score_gemma":0.00038078916,"teacher_disagreement_score":0.32017782,"about_ca_system_score_codex":0.0005483794,"about_ca_system_score_gemma":0.00057422,"threshold_uncertainty_score":0.99947816},"labels":[],"label_agreement":null},{"id":"W2061436693","doi":"10.3201/eid1307.061197","title":"Avian Influenza Risk Perceptions, Laos","year":2007,"lang":"en","type":"letter","venue":"Emerging infectious diseases","topic":"Influenza Virus Research Studies","field":"Medicine","cited_by":46,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Agence Universitaire de la Francophonie","keywords":"Influenza A virus subtype H5N1; Outbreak; Socioeconomics; Geography; Highly pathogenic; Environmental health; Poultry farming; Veterinary medicine; Medicine; Virology","score_opus":0.03743676053371186,"score_gpt":0.3674720671723635,"score_spread":0.33003530663865166,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2061436693","genre_codex":"commentary","genre_gemma":"commentary","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"commentary","genre_consensus":"commentary","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.2992103,0.059631534,0.0009840899,0.47290778,0.007943279,0.012081213,0.006177885,0.011939029,0.1291249],"genre_scores_gemma":[0.010377618,0.003091022,0.00012240464,0.96261466,0.015720947,0.00043532226,0.00078900706,0.00037813705,0.006470888],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9952315,0.00028219467,0.0007436454,0.00092202955,0.0014426096,0.0013780153],"domain_scores_gemma":[0.9971229,0.00042432014,0.0003491849,0.001106133,0.00059682014,0.0004006689],"candidate_categories":["metaepi_narrow","research_integrity","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00033976897,0.0008075006,0.0010216043,0.0012927,0.0008736432,0.00012168073,0.00026693114,0.0007900206,0.002364003],"category_scores_gemma":[0.0018744096,0.0007435776,0.0007729894,0.00069408526,0.00048286916,0.00018198967,0.00026229766,0.0039427956,0.002121508],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006478169,0.00014344775,0.3000282,0.0006064722,0.0006974306,0.0007847265,0.00020296143,0.000021336178,0.00000903521,0.0000036046793,0.69439054,0.00304749],"study_design_scores_gemma":[0.0013951298,0.00025644063,0.12373855,0.0004011688,0.0011599091,0.00007461854,0.000084437255,0.000019634941,0.000007828854,0.00010797702,0.87210506,0.0006492683],"about_ca_topic_score_codex":0.0008252857,"about_ca_topic_score_gemma":0.000053963267,"teacher_disagreement_score":0.48970687,"about_ca_system_score_codex":0.00073422556,"about_ca_system_score_gemma":0.00040674838,"threshold_uncertainty_score":0.9995015},"labels":[],"label_agreement":null},{"id":"W2063164282","doi":"10.3201/eid1802.101611","title":"Determining Mortality Rates Attributable to<i>Clostridium difficile</i>Infection","year":2012,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Clostridium difficile and Clostridium perfringens research","field":"Medicine","cited_by":57,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University Health Network","funders":"","keywords":"Death certificate; Clostridium difficile; Medicine; Clostridium; Cause of death; Mortality rate; C difficile; Clostridium Infections; Microbiology; Biology; Internal medicine; Antibiotics; Disease","score_opus":0.036502256741758346,"score_gpt":0.34967584299346727,"score_spread":0.31317358625170894,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2063164282","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9911368,0.0008347153,0.00042692025,0.0004019376,0.001103556,0.0008452988,0.00008798002,0.00069872866,0.0044640996],"genre_scores_gemma":[0.9963442,0.00021529899,0.00004569042,0.0004536248,0.0018514313,0.00020577053,0.00014300898,0.00009267589,0.0006482839],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9965447,0.00012824564,0.00056034286,0.00058264914,0.0007842827,0.0013997456],"domain_scores_gemma":[0.9973873,0.0001870488,0.00013089583,0.0006878,0.0002946501,0.0013122932],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0003812069,0.0004663468,0.0006504318,0.00045830634,0.0005211754,0.00011480667,0.00012950247,0.00015788463,0.0010763542],"category_scores_gemma":[0.00093804864,0.0004498765,0.0003785373,0.0011941241,0.00009611144,0.0003621353,0.00021100078,0.00042548965,0.00070305244],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000107219785,0.001312003,0.9622941,0.00021851025,0.00022480197,0.000036724072,0.0001618416,0.00019937001,0.02361411,0.00008001622,0.007185329,0.0045659803],"study_design_scores_gemma":[0.0023585313,0.000811857,0.72599185,0.00026875487,0.00085521047,0.00022946643,0.00014502562,0.00046697495,0.2313692,0.00003728466,0.036511622,0.00095425226],"about_ca_topic_score_codex":0.0005114391,"about_ca_topic_score_gemma":0.000033035154,"teacher_disagreement_score":0.23630227,"about_ca_system_score_codex":0.0005260533,"about_ca_system_score_gemma":0.00024223067,"threshold_uncertainty_score":0.9998368},"labels":[],"label_agreement":null},{"id":"W2064888178","doi":"10.3201/eid1911.130737","title":"Pulmonary Nontuberculous Mycobacterial Disease, Ontario, Canada, 1998–2010","year":2013,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Mycobacterium research and diagnosis","field":"Medicine","cited_by":219,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of Toronto; University Health Network; Mount Sinai Hospital","funders":"","keywords":"Nontuberculous mycobacteria; Pulmonary disease; Medicine; Lung disease; Disease; Mycobacterium avium complex; Tuberculosis; Internal medicine; Mycobacterium; Pathology; Lung","score_opus":0.006779963862972356,"score_gpt":0.2218166871781992,"score_spread":0.21503672331522683,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2064888178","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98565614,0.00048843987,0.0000064663936,0.001156555,0.0015709151,0.00085671525,0.00014347964,0.00025993123,0.009861337],"genre_scores_gemma":[0.9930124,0.0001036941,0.000017108685,0.0012236424,0.00097136054,0.00045952597,0.00045322653,0.000057648067,0.0037013474],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9975855,0.00007148016,0.00035483507,0.0005134517,0.00067331543,0.0008014584],"domain_scores_gemma":[0.9973346,0.0001351326,0.00008548438,0.0005821871,0.0001813808,0.0016811916],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.000057838144,0.00034695506,0.0004118404,0.00016724791,0.00028993943,0.0001315224,0.00015159477,0.00007401097,0.011264901],"category_scores_gemma":[0.00033082865,0.0003125697,0.00022416616,0.00025033063,0.00008389644,0.0003124233,0.00012079776,0.00030377723,0.00046919234],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00018003712,0.00048314699,0.89734244,0.00014968142,0.00013597147,0.00053916493,0.00004172338,0.000011770381,0.0006422429,0.000021205582,0.09790132,0.0025512667],"study_design_scores_gemma":[0.0008535849,0.00013696,0.9632938,0.00010660678,0.0002135008,0.000082204475,0.000024253564,0.00011790133,0.000056570676,0.00017363286,0.034600493,0.00034047774],"about_ca_topic_score_codex":0.9589672,"about_ca_topic_score_gemma":0.79051054,"teacher_disagreement_score":0.16845667,"about_ca_system_score_codex":0.00082517165,"about_ca_system_score_gemma":0.0025607145,"threshold_uncertainty_score":0.99993265},"labels":[],"label_agreement":null},{"id":"W2066357724","doi":"10.3201/eid1907.111417","title":"Ciprofloxacin-Resistant<i>Campylobacter</i>spp. in Retail Chicken, Western Canada","year":2013,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Salmonella and Campylobacter epidemiology","field":"Agricultural and Biological Sciences","cited_by":56,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Public Health Agency of Canada","funders":"Health Canada; Public Health Agency; Public Health Agency of Canada; Agriculture and Agri-Food Canada; Canadian Food Inspection Agency","keywords":"Campylobacter; Ciprofloxacin; Antibiotic resistance; Antimicrobial; Veterinary medicine; Biology; Microbiology; Medicine; Antibiotics; Bacteria","score_opus":0.010018336637917848,"score_gpt":0.20364926619447396,"score_spread":0.19363092955655611,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2066357724","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99464566,0.00064138597,0.0000012212156,0.0016487981,0.00045140312,0.00030522217,0.00005522962,0.00016422098,0.0020868653],"genre_scores_gemma":[0.9968659,0.00007855855,0.0000028170741,0.0019487767,0.00032981593,0.000105629784,0.00010159226,0.000003380382,0.0005634747],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9979863,0.00023800318,0.0004343473,0.00048330583,0.00021738074,0.00064064894],"domain_scores_gemma":[0.9990746,0.0003097293,0.00014179245,0.00013241326,0.00007587666,0.00026561556],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00013072146,0.0002755573,0.00037536715,0.000028592845,0.00019798805,0.0000746068,0.0002727578,0.000099341756,0.0024029226],"category_scores_gemma":[0.00017071937,0.00012819668,0.00011558061,0.00043508946,0.000061921135,0.00020934881,0.00009439863,0.0001856588,0.00016538176],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000014073258,0.000087865104,0.974332,0.000012125246,0.000019529629,0.000017886605,0.000020878264,0.000026087928,0.009540793,0.000027759408,0.006697736,0.009203269],"study_design_scores_gemma":[0.0001992044,0.000081676844,0.9752376,0.000029762383,0.000016143495,0.000005654026,0.00011339582,0.000029083674,0.00009573495,0.00043898128,0.023441907,0.00031087687],"about_ca_topic_score_codex":0.56878173,"about_ca_topic_score_gemma":0.7796006,"teacher_disagreement_score":0.21081887,"about_ca_system_score_codex":0.0001437776,"about_ca_system_score_gemma":0.00006449399,"threshold_uncertainty_score":0.998509},"labels":[],"label_agreement":null},{"id":"W2068176671","doi":"10.3201/eid1009.040244","title":"SARS during Pregnancy, United States","year":2004,"lang":"en","type":"letter","venue":"Emerging infectious diseases","topic":"COVID-19 Impact on Reproduction","field":"Medicine","cited_by":92,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Associated Medical Services","funders":"","keywords":"Outbreak; Personal protective equipment; Business; Public health; Medical emergency; Environmental health; Public relations; Coronavirus disease 2019 (COVID-19); Medicine; Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2); Internet privacy; Nursing; Political science; Computer science; Virology; Infectious disease (medical specialty); Pathology","score_opus":0.01455894126016037,"score_gpt":0.29446205446202883,"score_spread":0.27990311320186845,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2068176671","genre_codex":"commentary","genre_gemma":"commentary","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"commentary","genre_consensus":"commentary","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.25773853,0.0037369966,0.0001400301,0.7288507,0.0027508785,0.0020460389,0.00031918922,0.0034709373,0.0009466892],"genre_scores_gemma":[0.23206823,0.0030234961,0.000050920524,0.72750306,0.014684544,0.00044804637,0.010207691,0.0007683533,0.011245659],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99697065,0.00010520097,0.0005053317,0.0009552808,0.00069526985,0.0007682531],"domain_scores_gemma":[0.9979919,0.00009943305,0.00032596933,0.0010964391,0.00025689945,0.00022936786],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.000048235634,0.0006402936,0.0006871773,0.0012877369,0.00028884938,0.00008964757,0.00014425641,0.00042987865,0.0004648561],"category_scores_gemma":[0.00066865137,0.00063811295,0.00042191116,0.00096125086,0.00014508898,0.00017576282,0.00010045523,0.0014358825,0.00016291905],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015195885,0.0006669124,0.07265761,0.01015864,0.0012792365,0.0060787485,0.00059508235,0.0037638196,0.00039468304,0.0000104149385,0.9025895,0.0016533965],"study_design_scores_gemma":[0.005096554,0.00057585037,0.050558053,0.00825908,0.0028373909,0.0013144027,0.000057401856,0.00009308919,0.0009461949,0.0012387527,0.9272709,0.0017523547],"about_ca_topic_score_codex":0.001191155,"about_ca_topic_score_gemma":0.00001177319,"teacher_disagreement_score":0.025670309,"about_ca_system_score_codex":0.0012495392,"about_ca_system_score_gemma":0.000502468,"threshold_uncertainty_score":0.999607},"labels":[],"label_agreement":null},{"id":"W2071282762","doi":"10.3201/eid1807.120055","title":"Electronic Event–based Surveillance for Monitoring Dengue, Latin America","year":2012,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Data-Driven Disease Surveillance","field":"Medicine","cited_by":26,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Sante Montreal","funders":"U.S. National Library of Medicine; Audrey and Theodor Geisel School of Medicine at Dartmouth; National Institutes of Health; Dartmouth College","keywords":"Dengue fever; Latin Americans; Electronic surveillance; Event (particle physics); Geography; Computer science; Computer security; Environmental health; Virology; Medicine; Political science","score_opus":0.01091218329583128,"score_gpt":0.2982654745810686,"score_spread":0.28735329128523734,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2071282762","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9750408,0.0072169565,0.012093236,0.00028321144,0.0013342766,0.0012068287,0.0004444506,0.0014119846,0.0009682847],"genre_scores_gemma":[0.99698824,0.00011552754,0.00025412667,0.0003044226,0.0012881714,0.00034811665,0.0004051406,0.00009078167,0.00020549879],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99777275,0.00010563229,0.00034991163,0.0003954055,0.00034810213,0.0010281813],"domain_scores_gemma":[0.99828273,0.00031001915,0.00018507254,0.0005509179,0.00017265395,0.0004986043],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00021011941,0.00031135802,0.00045741443,0.00018143095,0.00023377326,0.0000321752,0.00012564973,0.00005983061,0.00020301361],"category_scores_gemma":[0.0008297215,0.00031613227,0.00032316914,0.00044702526,0.000073013434,0.00021045326,0.00004687867,0.00017545209,0.000098681805],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013936928,0.000544179,0.98627865,0.00021450427,0.00015792677,0.000004582086,0.00004186508,0.0005509033,0.00042272525,0.00006775011,0.0031341156,0.008443421],"study_design_scores_gemma":[0.0022647697,0.00020630802,0.91394454,0.00011504104,0.00021424926,0.00000865111,0.00004497334,0.0015679715,0.00047190432,0.00006628502,0.08064617,0.00044915456],"about_ca_topic_score_codex":0.0000594124,"about_ca_topic_score_gemma":0.00001157986,"teacher_disagreement_score":0.077512056,"about_ca_system_score_codex":0.000303071,"about_ca_system_score_gemma":0.00024527183,"threshold_uncertainty_score":0.9999291},"labels":[],"label_agreement":null},{"id":"W2072968309","doi":"10.3201/eid2002.131418","title":"Andes Hantavirus Variant in Rodents, Southern Amazon Basin, Peru","year":2014,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Viral Infections and Vectors","field":"Medicine","cited_by":14,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"National Institute of Allergy and Infectious Diseases; National Institutes of Health; United States Agency for International Development","keywords":"Hantavirus; Amazon rainforest; Amazon basin; Hantavirus Infection; Disease reservoir; Virology; Geography; Biology; Ecology; Virus","score_opus":0.008177563022036663,"score_gpt":0.26084742730422644,"score_spread":0.2526698642821898,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2072968309","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9903206,0.0002501286,0.000958047,0.00018074614,0.00049342605,0.00024820835,0.000020402887,0.0003367315,0.007191663],"genre_scores_gemma":[0.9983437,0.00006976924,0.000023417117,0.0005158666,0.00040907794,0.000040228355,0.000029963925,0.0000428191,0.0005251436],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9987252,0.00010508089,0.00027961866,0.00033900354,0.00020550926,0.0003456156],"domain_scores_gemma":[0.99929905,0.00005734759,0.000074726944,0.00030563137,0.00006375615,0.00019950376],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00016526252,0.00021650364,0.00033035368,0.00032258197,0.00018562975,0.000054467648,0.000059185528,0.00007742512,0.0007967185],"category_scores_gemma":[0.00025675618,0.0001901158,0.00016848752,0.00039857288,0.00006215971,0.00012227312,0.000040835504,0.00019457267,0.00022372573],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006724748,0.00068510283,0.9866335,0.000083818624,0.0000701437,0.00006624725,0.00030343398,0.0002109218,0.0005007199,0.00039070466,0.0009479715,0.010040225],"study_design_scores_gemma":[0.0030442702,0.00057393895,0.9762266,0.00027666218,0.00029291533,0.00018857057,0.00028647963,0.0031582697,0.00023464819,0.00056691153,0.014701916,0.00044881593],"about_ca_topic_score_codex":0.0015265413,"about_ca_topic_score_gemma":0.00024644504,"teacher_disagreement_score":0.013753944,"about_ca_system_score_codex":0.00011609316,"about_ca_system_score_gemma":0.000056773926,"threshold_uncertainty_score":0.87235093},"labels":[],"label_agreement":null},{"id":"W2074054608","doi":"10.3201/eid1607.100159","title":"Postexposure Treatment of Marburg Virus Infection","year":2010,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Viral Infections and Outbreaks Research","field":"Medicine","cited_by":89,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Public Health Agency of Canada","funders":"National Institutes of Health","keywords":"Marburg virus; Virology; Vesicular stomatitis virus; Vesicular Stomatitis; Virus; Biology; Recombinant DNA; Stomatitis; Medicine; Immunology; Ebola virus; Internal medicine","score_opus":0.013110090504196432,"score_gpt":0.32009177548209866,"score_spread":0.30698168497790224,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2074054608","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9895922,0.00021634894,0.00010679645,0.00014900866,0.0007595876,0.0003835235,0.00003454066,0.00022742752,0.008530591],"genre_scores_gemma":[0.9980923,0.00041583524,0.000025447964,0.00004549112,0.00043048125,0.00005278783,0.00004607469,0.000030165102,0.00086140394],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99895245,0.000038828755,0.00026076057,0.00024473976,0.0002349059,0.00026831482],"domain_scores_gemma":[0.999112,0.000051587194,0.00008344478,0.00031689138,0.00020614036,0.0002298975],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0000608341,0.00018294813,0.00030247227,0.00033472772,0.00016137381,0.000024622788,0.000030856598,0.000099088735,0.0017654047],"category_scores_gemma":[0.0001032449,0.00014958398,0.00027994692,0.00040484525,0.00011198123,0.00011413419,0.00002421992,0.00016728883,0.00008926919],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010423456,0.00161854,0.883418,0.000079468904,0.00017452639,0.000024859624,0.000077196535,0.000041326566,0.07214799,0.00014867978,0.00057288416,0.041592255],"study_design_scores_gemma":[0.0024838874,0.0029689714,0.9348438,0.000045109417,0.00036760105,0.00021737845,0.000020400124,0.00028828674,0.031290002,0.00016321031,0.027070982,0.00024039952],"about_ca_topic_score_codex":0.0034570075,"about_ca_topic_score_gemma":0.0009124869,"teacher_disagreement_score":0.05142573,"about_ca_system_score_codex":0.000089453795,"about_ca_system_score_gemma":0.00012897313,"threshold_uncertainty_score":0.9991471},"labels":[],"label_agreement":null},{"id":"W2074763389","doi":"10.3201/eid1406.071357","title":"Serogroup Y Meningococcal Disease, Colombia","year":2008,"lang":"en","type":"letter","venue":"Emerging infectious diseases","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":50,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Neisseria meningitidis; Medicine; Outbreak; Meningitis; Meningococcal disease; Penicillin; Meningococcal vaccine; Antibiogram; Virology; Microbiology; Antibiotics; Antibiotic resistance; Pediatrics; Immunization; Biology; Immunology; Antibody","score_opus":0.011005623753801132,"score_gpt":0.23613879782928476,"score_spread":0.22513317407548364,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2074763389","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.6260827,0.03133688,0.0001708884,0.27119786,0.047362197,0.0033901087,0.004043217,0.0076788845,0.00873726],"genre_scores_gemma":[0.5872616,0.0033307788,0.000017339587,0.31980014,0.01840429,0.0017383121,0.022829805,0.00074126647,0.04587647],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9973053,0.0003513077,0.0005436871,0.00084177026,0.000061319144,0.0008966156],"domain_scores_gemma":[0.9984944,0.00021141762,0.00031887676,0.000706215,0.00016986675,0.00009921693],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.000057713252,0.00071925484,0.00076600065,0.00040141988,0.0009460671,0.00009517189,0.000331159,0.0009696678,0.004215312],"category_scores_gemma":[0.00015113635,0.0007031135,0.0005871657,0.00034065897,0.0002750887,0.00019267775,0.00019176544,0.0015726296,0.0017577334],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00005437549,0.00022601704,0.024248866,0.000117227304,0.00058445847,0.00011862432,0.000047157973,0.000009423683,0.00076188537,0.00003328375,0.9730024,0.00079628464],"study_design_scores_gemma":[0.0010303805,0.00015376403,0.01487192,0.000104057086,0.00051280874,0.000199532,0.0000070705346,0.000002134758,0.000089283785,0.00013765445,0.9821012,0.00079019653],"about_ca_topic_score_codex":0.00031707826,"about_ca_topic_score_gemma":0.000018189518,"teacher_disagreement_score":0.04860227,"about_ca_system_score_codex":0.00015265962,"about_ca_system_score_gemma":0.00022964166,"threshold_uncertainty_score":0.999542},"labels":[],"label_agreement":null},{"id":"W2074949194","doi":"10.3201/eid1104.041070","title":"Ross River Virus Disease Reemergence, Fiji, 2003–2004","year":2005,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Mosquito-borne diseases and control","field":"Medicine","cited_by":54,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Manitoba Health; Health Canada; Royal University Hospital; McGill University Health Centre; Montreal General Hospital","funders":"McGill University","keywords":"Ross River virus; Virus; Virology; Geography; Biology","score_opus":0.006402840599998265,"score_gpt":0.2635829796427275,"score_spread":0.25718013904272924,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2074949194","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9510971,0.035821117,0.00087216217,0.0019974138,0.0014115855,0.0012529687,0.00050760736,0.0012267864,0.0058132657],"genre_scores_gemma":[0.9894469,0.00078153587,0.00005987058,0.002962309,0.0018826164,0.00022637307,0.00017795846,0.00008470109,0.0043777493],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9974411,0.00007228607,0.0004822571,0.00069880544,0.0005681656,0.00073738943],"domain_scores_gemma":[0.9973629,0.000038937324,0.00015218316,0.00080953987,0.00034704607,0.0012893855],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.000088064044,0.0004305727,0.0004700326,0.00022714386,0.00037665883,0.00006833002,0.00018369562,0.00008339464,0.0040718354],"category_scores_gemma":[0.00048890174,0.00040570015,0.0004444137,0.0007241367,0.0001746234,0.00032901127,0.00008916657,0.00021613856,0.0007916934],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0013919509,0.0036788627,0.70474887,0.00029915612,0.0007547548,0.0005206,0.00026131148,0.003741961,0.00049075304,0.001489231,0.2034175,0.07920506],"study_design_scores_gemma":[0.004599011,0.00026384369,0.59244305,0.00021098263,0.0019925097,0.000025999474,0.000048643546,0.006826794,0.000104326755,0.00037000116,0.39228633,0.00082851446],"about_ca_topic_score_codex":0.00023948724,"about_ca_topic_score_gemma":0.000085113374,"teacher_disagreement_score":0.18886884,"about_ca_system_score_codex":0.00019548985,"about_ca_system_score_gemma":0.00043367787,"threshold_uncertainty_score":0.9999863},"labels":[],"label_agreement":null},{"id":"W2077104812","doi":"10.3201/eid0911.030318","title":"Rapid Antigen-Capture Assay To Detect West Nile Virus in Dead Corvids","year":2003,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Mosquito-borne diseases and control","field":"Medicine","cited_by":45,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Agriculture Food and Rural Development; University of Guelph; Health Canada","funders":"Health Canada","keywords":"West Nile virus; Virology; Antigen; Biology; Virus; Immunology","score_opus":0.008083510069154263,"score_gpt":0.25940373179169035,"score_spread":0.2513202217225361,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2077104812","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9774608,0.009238632,0.0010419104,0.0003505849,0.0007456196,0.0009902983,0.00008696706,0.0003942684,0.009690914],"genre_scores_gemma":[0.99630475,0.0003272825,0.00005871588,0.0023640622,0.0002405956,0.00019701877,0.000040001523,0.000067023924,0.00040052956],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99785125,0.00019470017,0.00039232126,0.00056610425,0.0003596049,0.00063601084],"domain_scores_gemma":[0.99852186,0.00011104901,0.000088138164,0.0005334024,0.00012398235,0.0006215513],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00021235556,0.00034824052,0.0005044218,0.0003446567,0.00016953301,0.00006400386,0.00011922666,0.000110177236,0.0023148593],"category_scores_gemma":[0.00083053013,0.0003283379,0.00028564557,0.00070516113,0.000046273457,0.00011444767,0.00004005756,0.0002317831,0.00030129813],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00037894596,0.0010252772,0.95168525,0.00018393162,0.00021362961,0.0004467551,0.00025972558,0.00047904835,0.004535503,0.00052293035,0.010268036,0.030000938],"study_design_scores_gemma":[0.004769423,0.000577239,0.862727,0.0002832393,0.00043529342,0.00007271953,0.00023587928,0.00035155896,0.0015142135,0.00031697142,0.12795296,0.00076351664],"about_ca_topic_score_codex":0.0005659499,"about_ca_topic_score_gemma":0.0005467411,"teacher_disagreement_score":0.11768493,"about_ca_system_score_codex":0.00015157962,"about_ca_system_score_gemma":0.00023690783,"threshold_uncertainty_score":0.99991685},"labels":[],"label_agreement":null},{"id":"W2079511841","doi":"10.3201/eid1702.100629","title":"Novel HIV-1 Recombinant Forms in Antenatal Cohort, Montreal, Quebec, Canada","year":2010,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"HIV Research and Treatment","field":"Immunology and Microbiology","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Université de Montréal; Centre Hospitalier Universitaire Sainte-Justine","funders":"Canadian Institutes of Health Research; Université de Montréal; Styrelsen för Internationellt Utvecklingssamarbete","keywords":"Cohort; Human immunodeficiency virus (HIV); Recombinant DNA; Genome; Cohort study; Medicine; Virology; Biology; Genetics; Internal medicine; Gene","score_opus":0.004023200971623017,"score_gpt":0.21910405288106918,"score_spread":0.21508085190944617,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2079511841","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9948995,0.000684016,0.00002324313,0.00035949086,0.0010708023,0.00031771386,0.00033963265,0.00009474972,0.0022108618],"genre_scores_gemma":[0.9950689,0.00006892911,0.0000035718435,0.00006973157,0.000027126755,0.00011203567,0.00068854506,0.00001851893,0.003942645],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99879897,0.000042629745,0.0002216688,0.0003081064,0.00006349258,0.0005651559],"domain_scores_gemma":[0.9994208,0.00010143489,0.0000592839,0.00027727,0.000048453483,0.00009270966],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00007126027,0.00019126282,0.00023967914,0.00013955958,0.00021711305,0.00002264484,0.00014093057,0.000089301044,0.00085019966],"category_scores_gemma":[0.00015364628,0.00015425334,0.00007427695,0.00016192105,0.00010648235,0.00011540854,0.00006699549,0.0003547629,0.00024606969],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007413813,0.0007704089,0.95621246,0.000018545976,0.00021590981,0.00019902091,0.000066921086,0.00001808171,0.008329538,0.00016305174,0.028641148,0.0052907667],"study_design_scores_gemma":[0.0028254874,0.000064946384,0.9703127,0.000025532188,0.00003937124,0.00011044624,0.00007049409,0.000012804983,0.00092716835,0.000059311125,0.025306752,0.0002449472],"about_ca_topic_score_codex":0.92852443,"about_ca_topic_score_gemma":0.9950047,"teacher_disagreement_score":0.06648029,"about_ca_system_score_codex":0.0001936211,"about_ca_system_score_gemma":0.0005789445,"threshold_uncertainty_score":0.93090904},"labels":[],"label_agreement":null},{"id":"W2080635769","doi":"10.3201/eid0605.000506","title":"Atypical <i>Chryseobacterium meningosepticum</i> and Meningitis and Sepsis in Newborns and the Immunocompromised, Taiwan","year":2000,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Infections and bacterial resistance","field":"Biochemistry, Genetics and Molecular Biology","cited_by":98,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"BC Children's Hospital","funders":"Chang Gung University; National Science Council","keywords":"Chryseobacterium; Microbiology; Aeromonas salmonicida; Biology; Neonatal sepsis; Meningitis; 16S ribosomal RNA; RAPD; Sepsis; Virology; Gene; Bacteria; Medicine; Immunology; Genetics; Population; Genetic diversity; Pediatrics","score_opus":0.002189288655824128,"score_gpt":0.20862275228442664,"score_spread":0.20643346362860251,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2080635769","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9962545,0.0019298772,0.000030824584,0.00024488074,0.00006645862,0.0002076397,0.000018479346,0.0000236689,0.0012236537],"genre_scores_gemma":[0.99769336,0.0016023712,0.00004090526,0.00015930271,0.00012701852,0.00005778262,0.000019519117,0.00001660637,0.00028315367],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99918956,0.000091108646,0.00016650758,0.00028845784,0.00005765186,0.00020672804],"domain_scores_gemma":[0.99967235,0.000027447359,0.000038816535,0.0001596423,0.000022722656,0.00007900165],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009671231,0.00015517396,0.00016809275,0.000036703088,0.00023309235,0.00010221371,0.000047084097,0.000064659,0.00007457288],"category_scores_gemma":[0.000051697458,0.00012298037,0.00004446138,0.00008566135,0.00026897603,0.0000123863465,0.00006860453,0.00007772472,0.000001654876],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.005455265,0.0005222124,0.5029423,0.0002434851,0.0005399606,0.000041749827,0.0015243691,0.00016582943,0.32307038,0.0018509859,0.0019638196,0.16167963],"study_design_scores_gemma":[0.012585042,0.0005954048,0.8421366,0.00015119436,0.00024517832,0.00025290446,0.00024348119,0.00036865295,0.0046953484,0.0010077626,0.13674732,0.0009710803],"about_ca_topic_score_codex":0.00012954442,"about_ca_topic_score_gemma":0.0001352308,"teacher_disagreement_score":0.3391943,"about_ca_system_score_codex":0.0000110624,"about_ca_system_score_gemma":0.00002166611,"threshold_uncertainty_score":0.5014994},"labels":[],"label_agreement":null},{"id":"W2081388900","doi":"10.3201/eid1704.101283","title":"Genomic Analysis of Highly Virulent Georgia 2007/1 Isolate of African Swine Fever Virus","year":2011,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Animal Disease Management and Epidemiology","field":"Agricultural and Biological Sciences","cited_by":265,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Victoria","funders":"Biotechnology and Biological Sciences Research Council; Wellcome Trust","keywords":"ORFS; Biology; Genome; Virology; Genotype; Genetics; Whole genome sequencing; Phylogenetics; Virulence; Gene; Open reading frame; Peptide sequence","score_opus":0.022169227383004926,"score_gpt":0.2277817771358733,"score_spread":0.20561254975286838,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2081388900","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9947596,0.00051010447,0.00003405771,0.0000662023,0.00010429108,0.00012939547,0.00017867691,0.000083092484,0.0041345493],"genre_scores_gemma":[0.99933517,0.00017668516,0.0000134323045,0.00016836089,0.00008811394,0.000013066817,0.00006710561,0.0000019805548,0.00013608793],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9987232,0.00011659507,0.00042758693,0.0003040932,0.00013816376,0.00029036318],"domain_scores_gemma":[0.9992799,0.0001016561,0.00030147872,0.00010660102,0.000073576004,0.00013679233],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00015285033,0.00017483898,0.0004667585,0.00011236681,0.00010302413,0.00000705816,0.00021678278,0.000055978908,0.0039766496],"category_scores_gemma":[0.000060826133,0.00008288161,0.00042640715,0.00083463057,0.000117105126,0.0000885028,0.000130694,0.000055694316,0.000033479646],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015377867,0.0005007512,0.97316515,0.000024342602,0.001149245,0.000004869827,0.0001430095,0.00023642831,0.02015841,0.0008380804,0.00082846265,0.002797494],"study_design_scores_gemma":[0.00011141814,0.00021415444,0.99494654,0.0000073404267,0.0012087093,2.0786669e-7,0.00007017788,0.00048550745,0.00013714228,0.00044741144,0.0022027919,0.00016862832],"about_ca_topic_score_codex":0.005336772,"about_ca_topic_score_gemma":0.00071451743,"teacher_disagreement_score":0.021781381,"about_ca_system_score_codex":0.00002499067,"about_ca_system_score_gemma":0.000009654732,"threshold_uncertainty_score":0.9969339},"labels":[],"label_agreement":null},{"id":"W2081836597","doi":"10.3201/eid1905.121578","title":"Transmission of<i>Mycobacterium tuberculosis</i>Beijing Strains, Alberta, Canada, 1991–2007","year":2013,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Tuberculosis Research and Epidemiology","field":"Medicine","cited_by":30,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Mycobacterium tuberculosis; Beijing; Transmission (telecommunications); Tuberculosis; Virology; Microbiology; Biology; Geography; Medicine; China; Telecommunications; Pathology","score_opus":0.008035911236017799,"score_gpt":0.263533543729271,"score_spread":0.2554976324932532,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2081836597","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9844446,0.0014049321,0.00011759158,0.004313322,0.00038235003,0.000560562,0.00004065657,0.00010888316,0.008627109],"genre_scores_gemma":[0.9965447,0.00047245016,0.000071878334,0.0016504169,0.0003097079,0.00008204622,0.00018232747,0.000041865456,0.00064458523],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9978533,0.00015914842,0.0005171163,0.00038215038,0.00039731685,0.0006909779],"domain_scores_gemma":[0.99829483,0.00029921855,0.00011020746,0.00036527656,0.00019444151,0.00073602796],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00013520959,0.00026642985,0.00056457176,0.00018192202,0.00015958131,0.000018532925,0.00011165776,0.000105513776,0.002688354],"category_scores_gemma":[0.0005804692,0.00022413571,0.00023932818,0.00027482997,0.00010655858,0.00017090913,0.00004333654,0.0002700534,0.00006333705],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007239352,0.00042454805,0.8484116,0.0006673081,0.0004515793,0.000040002706,0.00012542526,0.00020362665,0.010165153,0.00012548322,0.116661295,0.022651546],"study_design_scores_gemma":[0.0012261975,0.00031260215,0.9318026,0.00026072582,0.00025961766,0.000085403575,0.00011980014,0.0012639858,0.00061956974,0.000117739844,0.063590765,0.00034103356],"about_ca_topic_score_codex":0.7484213,"about_ca_topic_score_gemma":0.10748446,"teacher_disagreement_score":0.64093685,"about_ca_system_score_codex":0.00019980237,"about_ca_system_score_gemma":0.0004748565,"threshold_uncertainty_score":0.9982233},"labels":[],"label_agreement":null},{"id":"W2082403900","doi":"10.3201/eid2006.131069","title":"Oral Fluid Testing for Pertussis, England and Wales, June 2007–August 2009","year":2014,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":25,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Public Health Ontario","funders":"Public Health England","keywords":"Medicine; Epidemiology; Pediatrics; Whooping cough; Vaccination; Internal medicine; Immunology","score_opus":0.011762799788102282,"score_gpt":0.24410327041243005,"score_spread":0.23234047062432778,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2082403900","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9923469,0.0027893146,0.00062317087,0.00015350568,0.002597834,0.00026253145,0.00010135804,0.0003488325,0.0007765457],"genre_scores_gemma":[0.99788016,0.000080455386,0.00006987328,0.00012346853,0.00045411306,0.000076118165,0.00014078026,0.000029318458,0.0011457332],"study_design_codex":"observational","study_design_gemma":"not_applicable","domain_scores_codex":[0.999002,0.00010821405,0.00022669589,0.0003028071,0.00001381154,0.00034647324],"domain_scores_gemma":[0.9992197,0.0003475064,0.00008613326,0.00017892318,0.000113976916,0.00005372311],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015141134,0.00020489824,0.00027090067,0.00011711556,0.0005628452,0.00005553677,0.000065669185,0.000120321514,0.00043067007],"category_scores_gemma":[0.0006909349,0.00017842044,0.00008107997,0.00013068493,0.00007769483,0.00013267668,0.0000515975,0.00010165142,0.000053829775],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00023759295,0.0006280245,0.6064103,0.0002184008,0.00043494176,0.0000013232471,0.00023540707,0.00006771675,0.18457115,0.0013372662,0.104375914,0.10148195],"study_design_scores_gemma":[0.0036841077,0.0005492082,0.1307149,0.00006633504,0.0002693462,0.000113526134,0.000037069007,0.00014254151,0.001439622,0.00056148606,0.8619588,0.00046305385],"about_ca_topic_score_codex":0.0003141627,"about_ca_topic_score_gemma":0.00009636111,"teacher_disagreement_score":0.7575829,"about_ca_system_score_codex":0.000018699911,"about_ca_system_score_gemma":0.000028627564,"threshold_uncertainty_score":0.7275774},"labels":[],"label_agreement":null},{"id":"W2082980969","doi":"10.3201/eid2102.141429","title":"Acquisition of Human Polyomaviruses in the First 18 Months of Life","year":2015,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Polyomavirus and related diseases","field":"Medicine","cited_by":29,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Health and Medical Research Council; Medical Research Council; Children's Health Foundation; Children's Medical Research","keywords":"Polyomavirus Infections; Merkel cell polyomavirus; Merkel cell; Respiratory system; Virology; Cohort; Medicine; Immunology; Biology; Merkel cell carcinoma; Pathology; Internal medicine; Transplantation; BK virus","score_opus":0.023987266230626584,"score_gpt":0.3004087889860982,"score_spread":0.2764215227554716,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2082980969","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9871604,0.0060208105,0.000007200078,0.00028562977,0.00013558418,0.0002931576,0.000043810272,0.00007184847,0.005981549],"genre_scores_gemma":[0.99919283,0.000092733164,0.0000037467794,0.00045825914,0.0001390232,0.000029696266,0.000029179744,0.000019201458,0.00003529796],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9987975,0.0000709736,0.00040372205,0.00016809403,0.0003591257,0.00020062672],"domain_scores_gemma":[0.9991107,0.000079650184,0.00018294316,0.0003199512,0.00010888905,0.00019787642],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013512775,0.00014930326,0.0003281853,0.00023689074,0.00008236916,0.000010117332,0.00011094686,0.0000686261,0.00013895889],"category_scores_gemma":[0.0002628105,0.000105598796,0.00017597126,0.00040904738,0.0001605693,0.00009931086,0.000036218546,0.00010452194,0.000009901817],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00022005595,0.0015637787,0.98830795,0.00020013137,0.000118452,0.000032492182,0.0008029866,0.00029818842,0.0004283809,0.0005255418,0.007197203,0.0003048204],"study_design_scores_gemma":[0.0038317775,0.0007352553,0.99025524,0.00041764876,0.00051671336,0.000016737444,0.0009778837,0.00013239322,0.00073388754,0.0008858801,0.0012959541,0.000200623],"about_ca_topic_score_codex":0.0015051941,"about_ca_topic_score_gemma":0.00009862683,"teacher_disagreement_score":0.012032452,"about_ca_system_score_codex":0.0000441123,"about_ca_system_score_gemma":0.0001737305,"threshold_uncertainty_score":0.4306194},"labels":[],"label_agreement":null},{"id":"W2083609938","doi":"10.3201/eid1909.121855","title":"Acute Encephalitis Syndrome Surveillance, Kushinagar District, Uttar Pradesh, India, 2011–2012","year":2013,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Mosquito-borne diseases and control","field":"Medicine","cited_by":49,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institute of Allergy and Infectious Diseases; Public Health Foundation of India; International Development Research Centre","keywords":"Medicine; Epidemiology; Incidence (geometry); Uttar pradesh; Psychological intervention; Environmental health; Japanese encephalitis; Etiology; Vaccination; Pediatrics; Encephalitis; Virology; Socioeconomics; Pathology","score_opus":0.003874312732705107,"score_gpt":0.23166708277664647,"score_spread":0.22779277004394136,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2083609938","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9852504,0.005531732,0.00021693128,0.0011875911,0.0008249579,0.0012351284,0.00041069568,0.0006994379,0.0046431157],"genre_scores_gemma":[0.9936699,0.0005164549,0.00002434773,0.000991769,0.00051017327,0.00052016665,0.00039157263,0.00008104364,0.0032945634],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9973272,0.00012106588,0.0005013087,0.00066382776,0.0005606434,0.0008259247],"domain_scores_gemma":[0.997848,0.00012762837,0.00021667377,0.00074072194,0.00022556407,0.00084141985],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.000095954616,0.00045072899,0.0006719451,0.0002443406,0.0003058629,0.00015452976,0.00022056808,0.00012761843,0.008528089],"category_scores_gemma":[0.0001558833,0.00040762842,0.00043866524,0.00041124286,0.00014140365,0.0005532612,0.00010711649,0.0002657816,0.0014896847],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000093159986,0.0009373958,0.9047599,0.00024652272,0.00088079064,0.0006800989,0.0000809157,0.000015603315,0.00018521887,0.00053089263,0.07832553,0.013263962],"study_design_scores_gemma":[0.0023825949,0.00042490903,0.9766739,0.000088565364,0.0006684723,0.0004005038,0.00007141361,0.00025537368,0.0000143635825,0.00045735735,0.018043472,0.00051909965],"about_ca_topic_score_codex":0.00083081453,"about_ca_topic_score_gemma":0.000027287579,"teacher_disagreement_score":0.071913965,"about_ca_system_score_codex":0.00014900099,"about_ca_system_score_gemma":0.00020373482,"threshold_uncertainty_score":0.9998376},"labels":[],"label_agreement":null},{"id":"W2084662941","doi":"10.3201/eid1905.121344","title":"<i>Campylobacter coli</i>Outbreak in Men Who Have Sex with Men, Quebec, Canada, 2010–2011","year":2013,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Salmonella and Campylobacter epidemiology","field":"Agricultural and Biological Sciences","cited_by":27,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Institut National de Santé Publique du Québec; Public Health Agency of Canada; Université de Montréal; Hôpital Saint-Luc; McGill University; Centre Hospitalier de l’Université de Montréal","funders":"","keywords":"Men who have sex with men; Campylobacter; Outbreak; Tetracycline; Campylobacter jejuni; Ciprofloxacin; Erythromycin; Transmission (telecommunications); Cluster (spacecraft); Medicine; Microbiology; Biology; Demography; Virology; Antibiotics; Bacteria; Human immunodeficiency virus (HIV); Syphilis","score_opus":0.006916850413540076,"score_gpt":0.19831705485210913,"score_spread":0.19140020443856906,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2084662941","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9768512,0.00024571692,0.0000018893429,0.002141235,0.00009281681,0.00042296844,0.00005149176,0.000119546894,0.020073114],"genre_scores_gemma":[0.9886508,0.00005423758,0.0000020226005,0.0015597017,0.00027092986,0.00016242334,0.00008622417,0.00000456086,0.0092090815],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9980411,0.00021253593,0.00035027886,0.0005114761,0.0002282915,0.0006563122],"domain_scores_gemma":[0.9990462,0.0002748884,0.00014405968,0.00013822327,0.00009283231,0.00030380473],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00010603258,0.0003121746,0.00041845726,0.0000308564,0.00019929052,0.00007923954,0.00023998696,0.00010626984,0.001979737],"category_scores_gemma":[0.000046234418,0.00013270236,0.00007572628,0.00020880353,0.00009750311,0.00023843326,0.000080599566,0.00017371279,0.00009639311],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000019339555,0.00009598459,0.84240294,0.000008547297,0.000037671616,0.000016788548,0.000060119575,0.000067715526,0.0011642396,0.000021251108,0.15225379,0.0038516172],"study_design_scores_gemma":[0.00030394498,0.000097915385,0.98663527,0.000023995484,0.000028225131,0.0000113698015,0.0005204231,0.00023127718,0.00009021461,0.0001550033,0.011541074,0.00036130688],"about_ca_topic_score_codex":0.9535847,"about_ca_topic_score_gemma":0.9605575,"teacher_disagreement_score":0.14423232,"about_ca_system_score_codex":0.00018409613,"about_ca_system_score_gemma":0.00009189871,"threshold_uncertainty_score":0.9989326},"labels":[],"label_agreement":null},{"id":"W2087015246","doi":"10.3201/eid1204.050695","title":"1951 Influenza Epidemic, England and Wales, Canada, and the United States","year":2006,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Influenza Virus Research Studies","field":"Medicine","cited_by":48,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Public Health Agency of Canada","funders":"National Institutes of Health","keywords":"Pandemic; Human mortality from H5N1; Death toll; Demography; Mortality rate; Public health; Influenza pandemic; Toll; Coronavirus disease 2019 (COVID-19); Geography; Medicine; Virology; Environmental health; Infectious disease (medical specialty); Disease; Immunology","score_opus":0.01718919187514321,"score_gpt":0.29770805114860327,"score_spread":0.28051885927346004,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2087015246","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98456293,0.012873164,0.000011610857,0.0012775016,0.00006769089,0.00038074216,0.00007207287,0.00010456204,0.0006497318],"genre_scores_gemma":[0.994423,0.0016769961,0.000009910645,0.0032211032,0.00023005424,0.000062826686,0.000056413155,0.000024133431,0.00029556692],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9986641,0.00014403084,0.00026579405,0.00024077603,0.00030762018,0.00037770942],"domain_scores_gemma":[0.9986319,0.0007602932,0.000072987255,0.00020624405,0.00015871675,0.0001698486],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00023862683,0.0001979461,0.00032559963,0.00015356924,0.00045576686,0.00004630163,0.000049457387,0.00003411651,0.000029734923],"category_scores_gemma":[0.0008879652,0.00012930832,0.00004272104,0.00026754307,0.0004778869,0.00006531727,0.00010949041,0.00020165411,0.0000026227574],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00028785627,0.000046105604,0.9835925,0.00015935807,0.00018142193,0.000043538173,0.00031850534,0.00041138046,0.000019369516,0.0005175056,0.0128665855,0.001555866],"study_design_scores_gemma":[0.0071911104,0.00008011085,0.69847775,0.00009142283,0.00025820528,0.000049926584,0.0001888566,0.001423554,0.00003628765,0.0012911877,0.29068202,0.000229554],"about_ca_topic_score_codex":0.7717223,"about_ca_topic_score_gemma":0.3430916,"teacher_disagreement_score":0.4286307,"about_ca_system_score_codex":0.00011031064,"about_ca_system_score_gemma":0.00019049425,"threshold_uncertainty_score":0.66889524},"labels":[],"label_agreement":null},{"id":"W2088142103","doi":"10.3201/eid1901.120423","title":"Adenovirus Serotype 14 Infection, New Brunswick, Canada, 2011","year":2012,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Virus-based gene therapy research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":31,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Dr. Georges-L.-Dumont University Hospital Centre","funders":"","keywords":"Serotype; Virology; Adenovirus infection; Mastadenovirus; Biology; Adenoviridae; Medicine; Microbiology; Genetics; Virus; Gene","score_opus":0.011226587628334799,"score_gpt":0.2703921605940448,"score_spread":0.25916557296571,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2088142103","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9898704,0.00636257,0.00026484457,0.00020213633,0.0009123037,0.00023160593,0.000019694113,0.00008669861,0.0020497155],"genre_scores_gemma":[0.99303854,0.00041807207,0.000012321615,0.0007303213,0.0016294845,0.000017730417,0.00010661235,0.000060648676,0.0039862655],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9984132,0.00011864631,0.00020547875,0.0003238742,0.0003012174,0.00063757744],"domain_scores_gemma":[0.9987833,0.000018131124,0.0000784128,0.0004650735,0.00012535062,0.0005297372],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00013520457,0.0002442206,0.00016480543,0.00009048259,0.00024667603,0.000033030385,0.00016085975,0.00010484767,0.00092435477],"category_scores_gemma":[0.00012749429,0.0002556445,0.000114630144,0.00017955386,0.000053666718,0.00001680783,0.000107331405,0.0001475761,0.00016189614],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00030483466,0.00018467061,0.8590297,0.000025200561,0.00019338126,0.0000033789388,0.0000348661,0.00040138658,0.012314259,0.000068179885,0.12341358,0.004026527],"study_design_scores_gemma":[0.0016516421,0.001319491,0.50223976,0.000021323724,0.00012359394,0.000046375964,0.000027332882,0.000022059769,0.077113375,0.00008917527,0.41640916,0.0009366806],"about_ca_topic_score_codex":0.36465925,"about_ca_topic_score_gemma":0.7467511,"teacher_disagreement_score":0.3820919,"about_ca_system_score_codex":0.00011305672,"about_ca_system_score_gemma":0.0025308528,"threshold_uncertainty_score":0.99998957},"labels":[],"label_agreement":null},{"id":"W2090415702","doi":"10.3201/eid1801.110275","title":"Spoligotyping of<i>Mycobacterium africanum</i>, Burkina Faso","year":2012,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Tuberculosis Research and Epidemiology","field":"Medicine","cited_by":32,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"European and Developing Countries Clinical Trials Partnership; Institute of Genetics; Global Fund to Fight AIDS, Tuberculosis and Malaria","keywords":"Mycobacterium tuberculosis; Biology; Mycobacterium; Tuberculosis; Virology; Microbiology; Medicine; Genetics; Bacteria","score_opus":0.016569764271409586,"score_gpt":0.3113871847930208,"score_spread":0.2948174205216112,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2090415702","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9817966,0.0033528127,0.00018361604,0.000781706,0.0004874132,0.00022140563,0.000024264129,0.00019528644,0.01295685],"genre_scores_gemma":[0.99780697,0.00039573788,0.000072613795,0.00063075026,0.00081535336,0.000035530564,0.000035923757,0.00002853545,0.0001785741],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99845845,0.00013270172,0.00030944686,0.00019693638,0.00021586684,0.0006866026],"domain_scores_gemma":[0.99874336,0.00020281109,0.00010292162,0.0003210015,0.00010195127,0.0005279561],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00025555812,0.00016766354,0.000425125,0.0002296164,0.000100616635,0.0000074583772,0.0000725836,0.00007193326,0.0004377277],"category_scores_gemma":[0.0010587445,0.00014486785,0.00022376499,0.00031920965,0.00012509455,0.0001579934,0.00008029965,0.00017754069,0.00011605839],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008263731,0.00036663347,0.9844785,0.000185343,0.0001628826,0.000007603843,0.00016286054,0.000012158608,0.0039002714,0.00073396653,0.0068542194,0.003052959],"study_design_scores_gemma":[0.0007735092,0.00024639265,0.9421544,0.00010312492,0.00023321797,0.00010758715,0.0001077884,0.00007747035,0.0012346789,0.00017145376,0.054584805,0.00020555705],"about_ca_topic_score_codex":0.00031397352,"about_ca_topic_score_gemma":0.000005864345,"teacher_disagreement_score":0.047730587,"about_ca_system_score_codex":0.000092727336,"about_ca_system_score_gemma":0.000080814745,"threshold_uncertainty_score":0.590754},"labels":[],"label_agreement":null},{"id":"W2091847017","doi":"10.3201/eid1102.040607","title":"Late Recognition of SARS in Nosocomial Outbreak, Toronto","year":2005,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"COVID-19 Clinical Research Studies","field":"Medicine","cited_by":15,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Toronto Public Health; University of Toronto; North York General Hospital; Public Health Agency of Canada","funders":"Public Health Agency; Public Health Agency of Canada","keywords":"Outbreak; Medicine; Severe acute respiratory syndrome; Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2); Sars virus; Coronavirus disease 2019 (COVID-19); Emergency medicine; 2019-20 coronavirus outbreak; Intensive care medicine; Pediatrics; Virology; Internal medicine; Disease; Infectious disease (medical specialty)","score_opus":0.03473684753864722,"score_gpt":0.3950421739031335,"score_spread":0.3603053263644863,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2091847017","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9934304,0.00047716423,0.000051939784,0.0017764134,0.00013169434,0.00038767036,0.000034864825,0.00011961605,0.003590261],"genre_scores_gemma":[0.9977717,0.00087817095,0.00005620152,0.00062875275,0.0003532472,0.000054520624,0.000021033313,0.00001779945,0.00021861671],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9987094,0.00007285768,0.0003902375,0.00024529983,0.00030281855,0.00027938787],"domain_scores_gemma":[0.9986051,0.0008234083,0.00008457493,0.00020013377,0.0001363663,0.00015042868],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00020664427,0.0001285673,0.00034482795,0.000110567984,0.000055600045,0.00000774546,0.000056051496,0.000053809315,0.00049506023],"category_scores_gemma":[0.0070668794,0.00011908975,0.00016585397,0.00017877347,0.00010056783,0.00015025566,0.00008392184,0.00014352667,0.000056950557],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00048885285,0.0015504966,0.8303785,0.00052732736,0.00017313827,0.000032621963,0.00049388007,0.00052126136,0.0013043258,0.00002864861,0.0018467223,0.16265427],"study_design_scores_gemma":[0.0048223687,0.00059831404,0.97838634,0.00047547228,0.00020029463,0.00000160836,0.00007536923,0.0011570522,0.00084239314,0.00068410015,0.012492653,0.00026404957],"about_ca_topic_score_codex":0.0021770357,"about_ca_topic_score_gemma":0.001820566,"teacher_disagreement_score":0.16239022,"about_ca_system_score_codex":0.00036784282,"about_ca_system_score_gemma":0.00013873528,"threshold_uncertainty_score":0.84602255},"labels":[],"label_agreement":null},{"id":"W2092544031","doi":"10.3201/eid1911.131226","title":"Cytomegaloviruses: From Molecular Pathogenesis to Intervention","year":2013,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Cytomegalovirus and herpesvirus research","field":"Medicine","cited_by":71,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Provincial Laboratory of Public Health","funders":"","keywords":"Computer science; Terminology; Data science; Computational biology; Bioinformatics; World Wide Web; Biology","score_opus":0.011619348529048742,"score_gpt":0.2959580091179347,"score_spread":0.28433866058888596,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2092544031","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9922995,0.00083860033,0.0017108483,0.00066012423,0.00021964563,0.0008340543,0.00008096031,0.00036005967,0.002996183],"genre_scores_gemma":[0.99689406,0.0000641804,0.00018430248,0.0015426527,0.00027228968,0.00037399074,0.000082733466,0.000064770626,0.00052098976],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9982097,0.00008197501,0.00033893372,0.00047132172,0.00044766217,0.0004503635],"domain_scores_gemma":[0.99853534,0.000066551285,0.00006107765,0.0004869642,0.00022697735,0.000623078],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.0000862897,0.00023749162,0.00034699167,0.0004012557,0.00014825154,0.00014665622,0.00013222678,0.00007926064,0.006015242],"category_scores_gemma":[0.0002796195,0.00022270481,0.00032937466,0.0005428926,0.00004682805,0.00021215618,0.00014259899,0.00016354419,0.0036909524],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002440256,0.0015431662,0.6663335,0.00019919524,0.00057642075,0.0002389152,0.0003849497,0.00015823069,0.14297307,0.00025919455,0.017948555,0.1691408],"study_design_scores_gemma":[0.002990203,0.00070824364,0.92627066,0.0003538624,0.0003796544,0.000026363407,0.00025832592,0.00058775157,0.010505563,0.0014935149,0.05574165,0.0006842035],"about_ca_topic_score_codex":0.0057337917,"about_ca_topic_score_gemma":0.00013685222,"teacher_disagreement_score":0.2599372,"about_ca_system_score_codex":0.00017973538,"about_ca_system_score_gemma":0.00007592415,"threshold_uncertainty_score":0.9970848},"labels":[],"label_agreement":null},{"id":"W2094520519","doi":"10.3201/eid1307.070094","title":"Community-acquired Extended-Spectrum β-Lactamase Producers, United States","year":2007,"lang":"en","type":"letter","venue":"Emerging infectious diseases","topic":"Antibiotic Resistance in Bacteria","field":"Biochemistry, Genetics and Molecular Biology","cited_by":50,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"Ministry of Environment; U.S. Department of Defense","keywords":"Geography; Biology","score_opus":0.009502284196541021,"score_gpt":0.25932990209063594,"score_spread":0.2498276178940949,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2094520519","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9009089,0.002915907,0.0010162112,0.08619673,0.0025221955,0.0012634074,0.0011877082,0.0007166619,0.0032722643],"genre_scores_gemma":[0.47604522,0.0020116821,0.00012753393,0.44635087,0.009655637,0.000088212924,0.055539288,0.0006094576,0.00957208],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99678504,0.0005887466,0.00054692675,0.0007783973,0.00038882962,0.00091203867],"domain_scores_gemma":[0.99755055,0.00008241874,0.0004109326,0.0015878084,0.00018978927,0.00017852434],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00028410496,0.0007304621,0.0005169019,0.0004237178,0.000571974,0.00015832634,0.0006027586,0.0007512797,0.00020964272],"category_scores_gemma":[0.00031952927,0.0007599189,0.0003357058,0.00042729898,0.00041794145,0.00001189181,0.00031775527,0.0010457992,0.00005033846],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012585097,0.00027665892,0.00963645,0.00043212128,0.00044390865,0.00021370366,0.000073329276,0.00007681467,0.0018026136,0.000008838029,0.9866523,0.000257424],"study_design_scores_gemma":[0.0005844953,0.00037318893,0.005934392,0.00016158904,0.00024165337,0.00005561261,0.00012981094,0.000015426784,0.002467563,0.00023644508,0.9888037,0.0009961359],"about_ca_topic_score_codex":0.00046324686,"about_ca_topic_score_gemma":0.00011367716,"teacher_disagreement_score":0.4248637,"about_ca_system_score_codex":0.00013743113,"about_ca_system_score_gemma":0.0001885754,"threshold_uncertainty_score":0.9994852},"labels":[],"label_agreement":null},{"id":"W2095016077","doi":"10.3201/eid1509.090794","title":"Clinical and Epidemiologic Characteristics of 3 Early Cases of Influenza A Pandemic (H1N1) 2009 Virus Infection, People’s Republic of China, 2009","year":2009,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Influenza Virus Research Studies","field":"Medicine","cited_by":51,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Pandemic; Quarantine; Medicine; China; Virus; Christian ministry; Human mortality from H5N1; Virology; Influenza A virus; Pandemic influenza; Infection control; Coronavirus disease 2019 (COVID-19); Disease; Environmental health; Infectious disease (medical specialty); Intensive care medicine; Internal medicine; Geography; Pathology","score_opus":0.06749987949720113,"score_gpt":0.4070720166158812,"score_spread":0.33957213711868006,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2095016077","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9936779,0.004756445,0.000069387555,0.000092556336,0.00015475825,0.0005491501,0.0002497349,0.00014954571,0.00030051457],"genre_scores_gemma":[0.99206525,0.0071766623,0.00005870907,0.00039301618,0.00019903346,0.00002423184,0.000019429337,0.000023928695,0.000039741473],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99647206,0.0004078728,0.0017452053,0.00045691396,0.00044450906,0.00047340858],"domain_scores_gemma":[0.99653715,0.00091557077,0.0009512671,0.0005479003,0.00074396754,0.00030416934],"candidate_categories":["metaresearch","metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0010499294,0.00033418922,0.0015280878,0.0005303422,0.00014865918,0.000013246566,0.000115601346,0.00019663607,0.00010253693],"category_scores_gemma":[0.014574771,0.0002840187,0.00038715915,0.0007105725,0.0006407847,0.00021502697,0.00012457083,0.00041887932,0.0000051496554],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00064712897,0.00095268904,0.9800101,0.00045750546,0.00031140735,0.00001855278,0.0002742474,0.000029769308,0.0008243864,0.00013967574,0.00079485006,0.015539719],"study_design_scores_gemma":[0.001750515,0.002962615,0.9930247,0.0003311341,0.0003928123,0.000060353144,0.000026457583,0.00005491808,0.00015636421,0.00047171672,0.00055310084,0.00021527905],"about_ca_topic_score_codex":0.0029950892,"about_ca_topic_score_gemma":0.00013484467,"teacher_disagreement_score":0.01532444,"about_ca_system_score_codex":0.000051845025,"about_ca_system_score_gemma":0.00026684653,"threshold_uncertainty_score":0.9999612},"labels":[],"label_agreement":null},{"id":"W2095409252","doi":"10.3201/eid1907.130027","title":"The Stealth Virus","year":2013,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Cytomegalovirus and herpesvirus research","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Provincial Laboratory of Public Health","funders":"","keywords":"Virology; Virus; Biology; Medicine","score_opus":0.013671629461634423,"score_gpt":0.30607389255398487,"score_spread":0.29240226309235046,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2095409252","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9632649,0.0029899077,0.000048737456,0.0029069765,0.0003263568,0.00076197996,0.00001254377,0.00033680978,0.029351791],"genre_scores_gemma":[0.9932911,0.00094142085,0.000008644456,0.0008191619,0.0003809091,0.00017857656,0.000008991555,0.00003085694,0.004340385],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99872243,0.00005792004,0.00020376901,0.00020904135,0.00035503122,0.0004517844],"domain_scores_gemma":[0.99890727,0.00016579614,0.000048258586,0.0003796225,0.00015689438,0.00034213433],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00012382738,0.00013374911,0.0001753136,0.000097229,0.0006295958,0.0001430962,0.00010242293,0.000040005223,0.0017963515],"category_scores_gemma":[0.00022042246,0.000085066495,0.00013743299,0.00027588033,0.00012482214,0.00011951338,0.00006802834,0.00021900931,0.0017132607],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001574245,0.0007389481,0.4944916,0.00018042735,0.00034012736,0.000049170005,0.0002975417,0.000028303004,0.0026382748,0.002807698,0.20929772,0.28897277],"study_design_scores_gemma":[0.0012808271,0.0003044063,0.49899238,0.00005144097,0.00008638785,0.00004082959,0.00018603685,0.0005684666,0.00033182296,0.0015669897,0.49636355,0.00022682904],"about_ca_topic_score_codex":0.002405141,"about_ca_topic_score_gemma":0.00025029524,"teacher_disagreement_score":0.28874594,"about_ca_system_score_codex":0.00010674671,"about_ca_system_score_gemma":0.000169959,"threshold_uncertainty_score":0.9991161},"labels":[],"label_agreement":null},{"id":"W2095787840","doi":"10.3201/eid1604.091107","title":"Novel<i>Corynebacterium diphtheriae</i>in Domestic Cats","year":2010,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Diphtheria, Corynebacterium, and Tetanus","field":"Biochemistry, Genetics and Molecular Biology","cited_by":78,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Public Health Agency of Canada","funders":"Biotechnology and Biological Sciences Research Council; Directorate for Biological Sciences; Centers for Disease Control and Prevention; University of Warwick; Micropathology","keywords":"Corynebacterium diphtheriae; CATS; Microbiology; Biology; Virology; Transmission (telecommunications); Corynebacterium; Zoonotic disease; Diphtheria; Medicine; Vaccination; Bacteria; Genetics; Pathology; Disease","score_opus":0.003968707411477225,"score_gpt":0.2382656803716799,"score_spread":0.23429697296020266,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2095787840","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9931644,0.000246918,0.0002472322,0.00006778835,0.0019908187,0.00021583491,0.000054406755,0.00010735281,0.0039052495],"genre_scores_gemma":[0.9981075,0.00006320756,0.00008864125,0.00027228915,0.0007088339,0.000082836,0.00011901772,0.00006577727,0.000491893],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99854785,0.000045138127,0.00028200803,0.0005221715,0.00014545405,0.0004573847],"domain_scores_gemma":[0.9990118,0.000025092184,0.000106328276,0.00056977896,0.00008360948,0.00020338691],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00011134193,0.00029876447,0.00023832968,0.0001078727,0.000115526505,0.000078158926,0.00024330222,0.00015262334,0.0002685781],"category_scores_gemma":[0.0002564565,0.00030180643,0.00015664993,0.00019106925,0.00010013773,0.000015728463,0.00011778889,0.00019609676,0.000051534906],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000066637316,0.00044150048,0.06782272,0.00003283132,0.000051685547,0.000030235144,0.00007036834,0.00006980389,0.9282721,0.00007454209,0.0003382737,0.0027292508],"study_design_scores_gemma":[0.0055175233,0.0008264974,0.7269031,0.00009435243,0.00022028777,0.00073279114,0.00013202522,0.00016050116,0.04776399,0.0005669179,0.21482928,0.0022527222],"about_ca_topic_score_codex":0.00015899936,"about_ca_topic_score_gemma":0.0004921509,"teacher_disagreement_score":0.8805082,"about_ca_system_score_codex":0.000019746745,"about_ca_system_score_gemma":0.00011557728,"threshold_uncertainty_score":0.9999434},"labels":[],"label_agreement":null},{"id":"W2097231104","doi":"10.3201/eid1512.090178","title":"Delineating<i>Anaplasma phagocytophilum</i>Ecotypes in Coexisting, Discrete Enzootic Cycles","year":2009,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Vector-borne infectious diseases","field":"Immunology and Microbiology","cited_by":121,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Public Health Agency of Canada","funders":"University of Liverpool; Wellcome Trust","keywords":"Anaplasma phagocytophilum; Biology; Ixodes ricinus; Enzootic; Ricinus; Anaplasma; Anaplasmosis; Genotype; Population; Tick; Anaplasmataceae; Ixodes; Host (biology); Zoology; Virology; Borrelia burgdorferi; Ecology; Genetics; Gene; Botany","score_opus":0.009123632285255838,"score_gpt":0.2640593799191046,"score_spread":0.2549357476338488,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2097231104","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9851716,0.007399928,0.0002516466,0.00038757085,0.0010800504,0.00044862067,0.00010495604,0.0010972449,0.004058356],"genre_scores_gemma":[0.99805135,0.00015478299,0.000028327635,0.0007142531,0.00021357971,0.00006320253,0.00022843377,0.000054665492,0.0004913854],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99724454,0.00033802606,0.00068693573,0.00073435926,0.00011255571,0.0008835946],"domain_scores_gemma":[0.9986608,0.00031527257,0.00026702802,0.000507508,0.00012294264,0.00012646124],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00017975026,0.0005161064,0.00058989215,0.00049188524,0.00046929574,0.000080457525,0.0003098876,0.00021585426,0.0009029677],"category_scores_gemma":[0.0009577257,0.0005217595,0.00030145296,0.0005952093,0.0002161826,0.00030221575,0.00008614773,0.00042701946,0.00058107264],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00027755168,0.0017407386,0.9513397,0.00009454955,0.00037640615,0.00014980874,0.00053618057,0.0043042675,0.009636853,0.0020773408,0.008164787,0.021301813],"study_design_scores_gemma":[0.0068397,0.0013167837,0.9608926,0.0004135047,0.00061599736,0.00035104313,0.00035181615,0.00053946674,0.0054117325,0.005916153,0.015364182,0.0019870226],"about_ca_topic_score_codex":0.00060989737,"about_ca_topic_score_gemma":0.0006695228,"teacher_disagreement_score":0.019314792,"about_ca_system_score_codex":0.00022783432,"about_ca_system_score_gemma":0.00016146855,"threshold_uncertainty_score":0.9997234},"labels":[],"label_agreement":null},{"id":"W2098900195","doi":"10.3201/eid1604.090695","title":"<i>Escherichia albertii</i>in Wild and Domestic Birds","year":2010,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Escherichia coli research studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":123,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Prince Edward Island","funders":"Washington State University; U.S. Department of Health and Human Services; National Institutes of Health; National Institute of Allergy and Infectious Diseases; Massachusetts Department of Fish and Game; Alaska Department of Fish and Game","keywords":"Intimin; Cytolethal distending toxin; Biology; Multilocus sequence typing; Escherichia coli; Shiga toxin; Microbiology; Virology; Gene; Genetics; Enterobacteriaceae; Genotype","score_opus":0.004050976256337637,"score_gpt":0.26309390793076753,"score_spread":0.2590429316744299,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2098900195","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99578315,0.0012987487,0.000060085637,0.00023575612,0.00024411513,0.00016188514,0.000007587908,0.000047618705,0.0021610693],"genre_scores_gemma":[0.99852276,0.0005202573,0.000096151336,0.00020760756,0.00023419064,0.00008229251,0.00001300571,0.000028962695,0.00029477355],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99899447,0.000053654312,0.00014779223,0.00034819348,0.00012723796,0.00032867413],"domain_scores_gemma":[0.99945134,0.000044306104,0.000039404193,0.00026029002,0.000052293217,0.00015236923],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000107381995,0.00016999703,0.00014847674,0.00007716335,0.0001355548,0.000039842173,0.00010568296,0.00007788745,0.00002854354],"category_scores_gemma":[0.00058032863,0.00016308147,0.00005631141,0.00019614816,0.0001670165,0.000007671892,0.00018862693,0.00020147121,0.00000819318],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000035625377,0.00017862837,0.766432,0.00004700851,0.000061011786,0.0000141864875,0.00006091125,0.000043860247,0.22856724,0.00014961365,0.0012376688,0.0031722204],"study_design_scores_gemma":[0.0023854484,0.0005074994,0.92928267,0.000049335154,0.000081105274,0.00007769313,0.00012410291,0.00048663284,0.007329742,0.0011212385,0.057654064,0.0009004851],"about_ca_topic_score_codex":0.00018546199,"about_ca_topic_score_gemma":0.0011337858,"teacher_disagreement_score":0.22123751,"about_ca_system_score_codex":0.000009292973,"about_ca_system_score_gemma":0.00007535962,"threshold_uncertainty_score":0.6650269},"labels":[],"label_agreement":null},{"id":"W2099648991","doi":"10.3201/eid1607.090389","title":"Persistence of Highly Pathogenic Avian Influenza Viruses in Natural Ecosystems","year":2010,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Influenza Virus Research Studies","field":"Medicine","cited_by":87,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal","funders":"European Commission; Institut de Recherche pour le Développement; Conseil Régional Provence-Alpes-Côte d'Azur; University of Georgia","keywords":"Biology; Influenza A virus subtype H5N1; Waterfowl; Virulence; Host (biology); Viral evolution; Transmission (telecommunications); Biological dispersal; Highly pathogenic; Predation; Virology; Viral shedding; Influenza A virus; Zoology; Ecology; Virus; Population; Gene; Genetics; Habitat; Genome","score_opus":0.03443383748853727,"score_gpt":0.3348923475206449,"score_spread":0.3004585100321076,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2099648991","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9938814,0.0031672867,0.0000024716442,0.00007367862,0.00056920823,0.0004721131,0.000055455155,0.00016499039,0.001613384],"genre_scores_gemma":[0.99900186,0.00008958544,0.00004107352,0.0004505075,0.00021541049,0.00008472671,0.000007975339,0.00003396807,0.00007488633],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9980732,0.000084642415,0.0004915304,0.00035844598,0.0005005776,0.0004915601],"domain_scores_gemma":[0.9987126,0.00018239426,0.00015025063,0.0004551752,0.0002933642,0.0002062243],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00022715237,0.00024500594,0.0004904962,0.0005014601,0.00015326274,0.000025262074,0.00015956453,0.0000881815,0.00015632219],"category_scores_gemma":[0.0015064711,0.00021527972,0.00024224805,0.0005863283,0.00023834131,0.0002034287,0.00012179569,0.00051785697,0.00006320821],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00016326644,0.00031040935,0.9269864,0.00037353396,0.00013466837,0.00006116429,0.00045554436,0.000041073075,0.06972265,0.00016249312,0.00022978739,0.0013590078],"study_design_scores_gemma":[0.0029249396,0.00030328732,0.9800833,0.00036139024,0.00016691386,0.00005496362,0.00035359454,0.00045613435,0.004985353,0.00010476586,0.009832601,0.00037279926],"about_ca_topic_score_codex":0.0007804613,"about_ca_topic_score_gemma":0.0014352124,"teacher_disagreement_score":0.0647373,"about_ca_system_score_codex":0.000115787145,"about_ca_system_score_gemma":0.00021532297,"threshold_uncertainty_score":0.8778853},"labels":[],"label_agreement":null},{"id":"W2099754720","doi":"10.3201/eid1702.101313","title":"New Delhi Metallo-β-Lactamase from Traveler Returning to Canada1","year":2011,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Antibiotic Resistance in Bacteria","field":"Biochemistry, Genetics and Molecular Biology","cited_by":106,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Bentley (Canada); University of Calgary; Calgary Laboratory Services","funders":"","keywords":"Traveler's diarrhea; New delhi; Geography; Medicine; Virology; Pathology","score_opus":0.01050077546141956,"score_gpt":0.22924875159717534,"score_spread":0.21874797613575578,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2099754720","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9877183,0.00045778762,0.007224721,0.000046602712,0.00051481684,0.00015689852,0.000059491107,0.000065732376,0.0037556433],"genre_scores_gemma":[0.9960648,0.000040664643,0.0016836848,0.00047484878,0.000459584,0.000008502917,0.00011709803,0.00004603146,0.001104793],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99881244,0.00005163048,0.00021954742,0.00044418237,0.00014244729,0.00032974393],"domain_scores_gemma":[0.999047,0.000012254688,0.00008333863,0.00042214795,0.00005759138,0.000377681],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00004729101,0.00021945937,0.00018550719,0.000061104176,0.0001192914,0.000036506084,0.00019726383,0.000087625966,0.000810641],"category_scores_gemma":[0.00017107363,0.00022205184,0.000120604986,0.00012394895,0.00003283826,0.000009056826,0.00008934752,0.00007330309,0.00004307654],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003651125,0.00020148807,0.6455278,0.000033033597,0.0006075809,0.000079806116,0.00070941914,0.0000830548,0.29189563,0.00019359983,0.051878378,0.00842515],"study_design_scores_gemma":[0.0011849348,0.0004098678,0.80662495,0.00009321201,0.00035305117,0.00001803758,0.0002886074,0.000032336626,0.116290264,0.00065649237,0.0728968,0.0011514269],"about_ca_topic_score_codex":0.006659099,"about_ca_topic_score_gemma":0.0034609414,"teacher_disagreement_score":0.17560536,"about_ca_system_score_codex":0.000036121422,"about_ca_system_score_gemma":0.0001924661,"threshold_uncertainty_score":0.99995565},"labels":[],"label_agreement":null},{"id":"W2101474389","doi":"10.3201/eid1806.111421","title":"Local Transmission of Imported Endemic Syphilis, Canada, 2011","year":2012,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Syphilis Diagnosis and Treatment","field":"Medicine","cited_by":29,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of Manitoba","funders":"","keywords":"Syphilis; Transmission (telecommunications); Endemic diseases; Neglected tropical diseases; Geography; Medicine; Virology; Environmental health; Public health; Pathology; Human immunodeficiency virus (HIV); Telecommunications; Computer science","score_opus":0.01034808024099523,"score_gpt":0.2554614052476089,"score_spread":0.24511332500661367,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2101474389","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98514265,0.01156413,0.00049212424,0.00038482767,0.00034826624,0.00029650834,0.000048949158,0.00011110593,0.0016114397],"genre_scores_gemma":[0.9990272,0.00035395022,0.000014975474,0.00025438867,0.00014741576,0.000039139348,0.00007364513,0.000024484316,0.000064814136],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9989041,0.00003265983,0.00027891633,0.00016958902,0.00029360887,0.00032113335],"domain_scores_gemma":[0.99911904,0.000072849376,0.00009023736,0.00023959094,0.00006654694,0.0004117452],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00006121578,0.00016940072,0.0003023065,0.000090187255,0.00007520359,0.0000032960882,0.00004209532,0.00005128525,0.0013457814],"category_scores_gemma":[0.000031676293,0.00013760866,0.00014215104,0.00012058258,0.000053601943,0.000077260374,0.000011921289,0.00008092339,0.000012572189],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000038619528,0.0010480868,0.97060907,0.00010466179,0.0001939131,0.000020230862,0.000100053236,0.00004776009,0.00032749263,0.0000829745,0.012269255,0.015157869],"study_design_scores_gemma":[0.0014328104,0.00017995002,0.9773189,0.00013300854,0.00062787684,0.000052266718,0.0000927754,0.00012112981,0.004907163,0.00003354939,0.014929216,0.0001713853],"about_ca_topic_score_codex":0.12511535,"about_ca_topic_score_gemma":0.008771034,"teacher_disagreement_score":0.11634431,"about_ca_system_score_codex":0.00021298468,"about_ca_system_score_gemma":0.0003465657,"threshold_uncertainty_score":0.99956715},"labels":[],"label_agreement":null},{"id":"W2102611562","doi":"10.3201/eid1512.091022","title":"Respiratory Infection in Institutions during Early Stages of Pandemic (H1N1) 2009, Canada","year":2009,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Respiratory viral infections research","field":"Medicine","cited_by":10,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Public Health Agency of Canada","funders":"Public Health Agency; Public Health Agency of Canada","keywords":"Outbreak; Pandemic; Human mortality from H5N1; H1N1 influenza; Population; Pandemic influenza; Virology; Influenza A virus; H1n1 pandemic; Coronavirus disease 2019 (COVID-19); Medicine; Environmental health; Infectious disease (medical specialty); Virus; Disease; Internal medicine","score_opus":0.03256289170985359,"score_gpt":0.34354971812573415,"score_spread":0.31098682641588055,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2102611562","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9952893,0.00078302517,0.000039420247,0.00007819032,0.00022315538,0.0004761331,0.000030116391,0.0002101432,0.0028705066],"genre_scores_gemma":[0.9991717,0.00016458792,0.0000051638362,0.0002535705,0.00016205195,0.000049440212,0.000010112209,0.000021595968,0.00016180622],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99804235,0.00014168993,0.00054904126,0.00034697528,0.00048197783,0.00043796134],"domain_scores_gemma":[0.9989262,0.00006009431,0.00013876139,0.0004017147,0.00022024558,0.0002529333],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00017916846,0.00022223117,0.0003762351,0.0008324798,0.00024241582,0.000026802107,0.0000802042,0.00009792056,0.00013825709],"category_scores_gemma":[0.0005842446,0.0002279895,0.000121427845,0.0012466683,0.000118635566,0.00032381472,0.00003729952,0.0004178091,0.000011792122],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000078200006,0.00036721615,0.9853797,0.00011450978,0.000044073877,0.000078183315,0.000045501325,0.0020418016,0.0096777575,0.00016022698,0.00038100878,0.0016318338],"study_design_scores_gemma":[0.0014580282,0.00042652196,0.99286765,0.00018006426,0.000052860363,0.000024310073,0.000016166132,0.000018245624,0.0023009684,0.00007120485,0.0023880051,0.0001960042],"about_ca_topic_score_codex":0.21005088,"about_ca_topic_score_gemma":0.21205181,"teacher_disagreement_score":0.007487934,"about_ca_system_score_codex":0.0008598496,"about_ca_system_score_gemma":0.0016217084,"threshold_uncertainty_score":0.9297142},"labels":[],"label_agreement":null},{"id":"W2102912586","doi":"10.3201/eid1908.121739","title":"Travel-associated Diseases, Indian Ocean Islands, 1997–2010","year":2013,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Travel-related health issues","field":"Medicine","cited_by":21,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Centers for Disease Control and Prevention; National Institutes of Health; Università degli Studi di Brescia; University of Cape Town; Université de Genève; Johns Hopkins University; Mahidol University; Emory University; University of Toronto; Universiteit van Amsterdam; University of Ottawa; McGill University; University of Minnesota; Harvard University; University of Washington","keywords":"Chikungunya; Malaria; Outbreak; Indian ocean; Diarrhea; Geography; Virology; Dengue fever; Chikungunya fever; Medicine; Environmental health; Immunology; Internal medicine; Oceanography","score_opus":0.0080380066152434,"score_gpt":0.25979176000486115,"score_spread":0.25175375338961775,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2102912586","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9878409,0.0026349428,0.00003322443,0.0022176094,0.0011649986,0.0012750905,0.0002980621,0.0013239058,0.003211275],"genre_scores_gemma":[0.99428785,0.00030328584,0.000020643662,0.001689867,0.00054842397,0.00009553247,0.0007610694,0.00012213427,0.0021711816],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99721444,0.00013480127,0.0006050529,0.00058263994,0.00053278496,0.000930276],"domain_scores_gemma":[0.99767,0.0001515981,0.00023873927,0.0005514023,0.0002362676,0.0011519943],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00010234273,0.00044482975,0.00065245305,0.00042460274,0.00042946514,0.000091865026,0.00015796961,0.00025289695,0.002602991],"category_scores_gemma":[0.00058732176,0.00041400624,0.0002834363,0.0006626864,0.0001439886,0.00028839137,0.00005878974,0.0005372106,0.001013553],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00005063009,0.0011002476,0.9040838,0.0002871533,0.0003486369,0.00014426056,0.0010945445,0.000018318062,0.000073089715,0.00008561722,0.0892125,0.003501244],"study_design_scores_gemma":[0.0029898465,0.000382982,0.9907498,0.00033088046,0.0005276741,0.000049825532,0.00031804942,0.00024150273,0.000049124854,0.0008029017,0.0030922196,0.00046524464],"about_ca_topic_score_codex":0.0020636786,"about_ca_topic_score_gemma":0.000103184204,"teacher_disagreement_score":0.08666599,"about_ca_system_score_codex":0.00030355318,"about_ca_system_score_gemma":0.00033809192,"threshold_uncertainty_score":0.9998312},"labels":[],"label_agreement":null},{"id":"W2102955726","doi":"10.3201/eid1601.091190","title":"Serologic Cross-Reactivity with Pandemic (H1N1) 2009 Virus in Pigs, Europe","year":2009,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Influenza Virus Research Studies","field":"Medicine","cited_by":64,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"Universiteit Gent; European Commission","keywords":"Virology; Pandemic; Serology; Coronavirus disease 2019 (COVID-19); Cross-reactivity; 2019-20 coronavirus outbreak; Virus; Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2); Medicine; Coronavirus Infections; Influenza A virus; Betacoronavirus; Biology; Cross reactions; Immunology; Outbreak; Antibody; Internal medicine; Infectious disease (medical specialty); Disease","score_opus":0.03580347144903953,"score_gpt":0.36292450557143724,"score_spread":0.3271210341223977,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2102955726","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98836625,0.002226562,0.00003873962,0.00029966008,0.00007530925,0.0005105961,0.0000346021,0.00050954416,0.007938723],"genre_scores_gemma":[0.99690604,0.00079815596,0.000021825706,0.0016283516,0.00018596278,0.000051274845,0.000017580209,0.000031572064,0.0003592632],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99787974,0.0001375882,0.00030293426,0.000498087,0.00047759846,0.0007040656],"domain_scores_gemma":[0.9988581,0.00014111622,0.00010318136,0.00040732126,0.00024015739,0.00025011628],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00024373354,0.0003177967,0.0004769897,0.00033696785,0.0002568433,0.000062647116,0.00011771753,0.000081075545,0.0001561643],"category_scores_gemma":[0.00089678663,0.00024415654,0.00010196004,0.0008113167,0.00021479605,0.0002858129,0.00006879463,0.0004918102,0.0001251886],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00079675135,0.00083119766,0.9868928,0.0000564367,0.00008021936,0.0003609474,0.00013203216,0.00075405283,0.0031298266,0.000040258084,0.0008262264,0.006099245],"study_design_scores_gemma":[0.0026380843,0.0010646515,0.99046665,0.00011515864,0.0000796271,0.000065292166,0.000020238762,0.00011072432,0.00027744754,0.0001822706,0.004711605,0.0002682479],"about_ca_topic_score_codex":0.00049155834,"about_ca_topic_score_gemma":0.00027436047,"teacher_disagreement_score":0.00853975,"about_ca_system_score_codex":0.00021148934,"about_ca_system_score_gemma":0.00020050645,"threshold_uncertainty_score":0.9956415},"labels":[],"label_agreement":null},{"id":"W2103088765","doi":"10.3201/eid1407.080122","title":"AIDS Patient Death Caused by Novel<i>Cryptococcus neoformans</i>×<i>C</i>.<i>gattii</i>Hybrid","year":2008,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Fungal Infections and Studies","field":"Medicine","cited_by":98,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Ste. Anne's Hospital","funders":"","keywords":"Cryptococcus gattii; Cryptococcus neoformans; Cryptococcosis; Serotype; Microbiology; Biology; Virology; Strain (injury)","score_opus":0.013432275602174738,"score_gpt":0.24850644862182125,"score_spread":0.2350741730196465,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2103088765","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98539907,0.0019488634,0.0011841939,0.00017492964,0.00085149886,0.0006720984,0.00019808428,0.0007521066,0.008819172],"genre_scores_gemma":[0.9962642,0.00065546524,0.000078501354,0.0015128119,0.0002989654,0.00023335057,0.00012404381,0.00006586978,0.0007667875],"study_design_codex":"observational","study_design_gemma":"not_applicable","domain_scores_codex":[0.9979825,0.000037747697,0.00046205457,0.00047497428,0.00042648366,0.00061626366],"domain_scores_gemma":[0.9987187,0.00009131941,0.00013817019,0.00043408002,0.00022799059,0.00038978233],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.000060277904,0.0004048486,0.0005247408,0.00022414213,0.0009687295,0.000033107663,0.00007862216,0.00006640332,0.0002920543],"category_scores_gemma":[0.00015402879,0.00035960483,0.00033219627,0.00041262453,0.00016852413,0.00021890493,0.000099415825,0.00027862447,0.00013586177],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010300696,0.0022775119,0.8705966,0.00015087968,0.0005596399,0.00020393262,0.00062877283,0.00021035799,0.004710761,0.00018477376,0.1167745,0.0035992824],"study_design_scores_gemma":[0.011066744,0.007182818,0.35488304,0.00044803592,0.0015284023,0.0016633485,0.00044809285,0.00077254925,0.013300838,0.00022847115,0.60626453,0.002213109],"about_ca_topic_score_codex":0.00038738886,"about_ca_topic_score_gemma":0.000012542667,"teacher_disagreement_score":0.5157135,"about_ca_system_score_codex":0.00019604697,"about_ca_system_score_gemma":0.00013567116,"threshold_uncertainty_score":0.9998856},"labels":[],"label_agreement":null},{"id":"W2107183022","doi":"10.3201/eid1603.081689","title":"New Endemic<i>Legionella pneumophila</i>Serogroup I Clones, Ontario, Canada","year":2010,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Legionella and Acanthamoeba research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":54,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Hospital for Sick Children; University of Toronto; Mount Sinai Hospital","funders":"","keywords":"Legionnaires' disease; Legionella pneumophila; Molecular epidemiology; Outbreak; Biology; Legionella; Typing; Genetic diversity; Serotype; Multilocus sequence typing; Population; Virology; Microbiology; Genotype; Genetics; Medicine; Environmental health","score_opus":0.004971623017652574,"score_gpt":0.22662794358584887,"score_spread":0.22165632056819629,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2107183022","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9928096,0.00044260142,0.00012667547,0.00039321225,0.0013288221,0.0001748137,0.000022968288,0.000058885045,0.0046424186],"genre_scores_gemma":[0.9928534,0.00009330617,0.000052679592,0.00061698066,0.0012442621,0.000023040151,0.00017730589,0.000041171155,0.0048978785],"study_design_codex":"observational","study_design_gemma":"not_applicable","domain_scores_codex":[0.9984674,0.000033772787,0.00021255952,0.0004787873,0.00030744605,0.0005000535],"domain_scores_gemma":[0.9988565,0.000020274569,0.00007351524,0.00049059803,0.00009247604,0.00046667823],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00007090188,0.00024530932,0.00017541114,0.00006059205,0.00026164035,0.000058443526,0.00028004212,0.00013334081,0.00023816177],"category_scores_gemma":[0.00008404973,0.00024357018,0.00013019101,0.00014867971,0.00006734499,0.000009133618,0.00015813785,0.00034495196,0.000020283327],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000058805796,0.000121173376,0.5996248,0.0000245404,0.00012396442,0.00005357058,0.00005840172,0.00011532309,0.1639724,0.00021483653,0.23314886,0.0024832936],"study_design_scores_gemma":[0.0011279722,0.00017146888,0.09871848,0.000015695796,0.00006631696,0.00012429268,0.000044447774,0.000022050664,0.021917641,0.00035421306,0.8767626,0.0006747718],"about_ca_topic_score_codex":0.84294033,"about_ca_topic_score_gemma":0.969103,"teacher_disagreement_score":0.6436138,"about_ca_system_score_codex":0.000082882325,"about_ca_system_score_gemma":0.0022131805,"threshold_uncertainty_score":0.99325037},"labels":[],"label_agreement":null},{"id":"W2108472810","doi":"10.3201/eid1212.060191","title":"Transmission of Human and Macaque<i>Plasmodium</i>spp. to Ex-Captive Orangutans in Kalimantan, Indonesia","year":2006,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Primate Behavior and Ecology","field":"Psychology","cited_by":22,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Simon Fraser University","funders":"Canadian Institutes of Health Research; Simon Fraser University; Lembaga Ilmu Pengetahuan Indonesia; Canada Research Chairs; Primate Conservation","keywords":"Transmission (telecommunications); Biology; Plasmodium (life cycle); Macaque; Rhesus macaque; Virology; Zoology; Quarantine; Zoonosis; Parasite hosting; Ecology","score_opus":0.010798232425255185,"score_gpt":0.2995378760339802,"score_spread":0.288739643608725,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2108472810","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9902077,0.0005074283,0.00019707308,0.000092288596,0.00022211774,0.00032848763,0.000045722925,0.00011758897,0.008281645],"genre_scores_gemma":[0.9994866,0.000020417025,0.000021387574,0.000116958414,0.0000536756,0.00007453089,0.000030438414,0.00003183075,0.00016412097],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99863,0.000117608426,0.00037680104,0.00037866316,0.000116358286,0.00038056597],"domain_scores_gemma":[0.99947786,0.00006212303,0.000090813,0.00020634216,0.00003719082,0.00012569717],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00007971749,0.00020365819,0.00033892822,0.0003673899,0.000108473076,0.000014194666,0.00010635293,0.000117629424,0.0007991328],"category_scores_gemma":[0.000007727119,0.00021145336,0.00007815249,0.00032216738,0.000089618494,0.00008466722,0.000039163522,0.00012997411,0.000045720048],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012944624,0.00077459496,0.97669816,0.000046879744,0.000023783718,0.00008778744,0.0010773964,0.00008413095,0.015408503,0.0016842901,0.0016364084,0.0023485995],"study_design_scores_gemma":[0.0015016133,0.00027888638,0.994963,0.00004857928,0.000087209744,0.000025704168,0.0002533414,0.000010684444,0.0010644991,0.0009072048,0.0006090033,0.00025026407],"about_ca_topic_score_codex":0.0029252572,"about_ca_topic_score_gemma":0.00069060724,"teacher_disagreement_score":0.01826483,"about_ca_system_score_codex":0.00006833991,"about_ca_system_score_gemma":0.000021777581,"threshold_uncertainty_score":0.8749944},"labels":[],"label_agreement":null},{"id":"W2109357801","doi":"10.3201/eid1809.120605","title":"Lack of Evidence for Chloroquine-Resistant<i>Plasmodium falciparum</i>Malaria, Leogane, Haiti","year":2012,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Malaria Research and Control","field":"Medicine","cited_by":31,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Canadian Institutes of Health Research","keywords":"Malaria; Plasmodium falciparum; Chloroquine; Virology; Biology; Medicine; Immunology","score_opus":0.0962499474818222,"score_gpt":0.37555564565480243,"score_spread":0.27930569817298023,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2109357801","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.95224196,0.016803095,0.006761033,0.009456782,0.0015590868,0.003786703,0.00038363424,0.00064710237,0.008360626],"genre_scores_gemma":[0.9965542,0.00015931902,0.0001246399,0.0003852274,0.0007837759,0.00029566002,0.000042174193,0.000044023505,0.0016109892],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99797213,0.00008287972,0.00040188662,0.00029252277,0.00048381512,0.00076678145],"domain_scores_gemma":[0.9979389,0.00056736387,0.00015813249,0.00044617188,0.0003268694,0.00056261965],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004026439,0.00023426914,0.00048947433,0.00020928073,0.00017255891,0.000029394554,0.0001426636,0.00008934412,0.0005586681],"category_scores_gemma":[0.002475925,0.00018874952,0.00033649456,0.00028686278,0.00012901862,0.0003522704,0.00006756518,0.00016057573,0.000048030437],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0072969026,0.002635154,0.89235955,0.0031510242,0.0010497776,0.000037553124,0.0004433264,0.00014446327,0.032285277,0.01867081,0.034857996,0.0070681777],"study_design_scores_gemma":[0.01237376,0.003068351,0.9180905,0.0012557963,0.002096025,0.00007348888,0.00028263463,0.0016579893,0.012639216,0.0010408891,0.046496034,0.00092526426],"about_ca_topic_score_codex":0.00023601585,"about_ca_topic_score_gemma":0.00003157145,"teacher_disagreement_score":0.044312254,"about_ca_system_score_codex":0.00009053758,"about_ca_system_score_gemma":0.00024729103,"threshold_uncertainty_score":0.76969814},"labels":[],"label_agreement":null},{"id":"W2110669976","doi":"10.3201/eid1609.100281","title":"Tuberculosis Acquired Outside of Households, Rural Vietnam","year":2010,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Tuberculosis Research and Epidemiology","field":"Medicine","cited_by":41,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"World Health Organization","keywords":"Tuberculosis; Mycobacterium tuberculosis; Transmission (telecommunications); Rural population; Population; Environmental health; Rural area; Socioeconomics; Medicine; Geography; Pathology; Sociology","score_opus":0.011922254870282303,"score_gpt":0.30167831485756985,"score_spread":0.28975605998728754,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2110669976","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9915112,0.0005513329,0.000041979976,0.0022892945,0.0005584541,0.0003292505,0.000047573394,0.00031510353,0.0043557794],"genre_scores_gemma":[0.9979807,0.00028665632,0.000092446004,0.00082627113,0.00046324005,0.00006560626,0.00006238909,0.000045028337,0.00017762027],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99828607,0.00010921302,0.0004368651,0.00029366984,0.0003238799,0.0005503151],"domain_scores_gemma":[0.99845344,0.0002204171,0.000116716314,0.00054707425,0.0001744287,0.00048790168],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00023957834,0.00022368912,0.0005529587,0.00021405463,0.0001398958,0.00001488061,0.00013082137,0.00014288966,0.00082720653],"category_scores_gemma":[0.0016499734,0.00018930303,0.00035818227,0.00033746887,0.00025965506,0.00013121923,0.00009199249,0.00028085263,0.00009677859],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012766589,0.0004695686,0.9400957,0.00014958397,0.00026453342,0.0000248302,0.0000876128,0.000038768096,0.03796281,0.00035490096,0.01410071,0.0063232686],"study_design_scores_gemma":[0.0017045639,0.00044130103,0.98500806,0.00009101378,0.00032589107,0.00013483391,0.00012534106,0.00040368273,0.0028126903,0.00047130973,0.008206801,0.00027451824],"about_ca_topic_score_codex":0.0005602288,"about_ca_topic_score_gemma":0.00014882605,"teacher_disagreement_score":0.044912305,"about_ca_system_score_codex":0.000042834603,"about_ca_system_score_gemma":0.00013066154,"threshold_uncertainty_score":0.90573317},"labels":[],"label_agreement":null},{"id":"W2110915832","doi":"10.3201/eid1805.111596","title":"No Association between 2008–09 Influenza Vaccine and Influenza A(H1N1)pdm09 Virus Infection, Manitoba, Canada, 2009","year":2012,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Influenza Virus Research Studies","field":"Medicine","cited_by":19,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Manitoba Health; Winnipeg Regional Health Authority; University of Manitoba","funders":"","keywords":"Virus; Medicine; Virology; Pandemic; Influenza A virus; Odds ratio; Influenza-like illness; Population; Human mortality from H5N1; Influenza vaccine; Immunization; Immunology; Internal medicine; Coronavirus disease 2019 (COVID-19); Environmental health; Antibody; Disease","score_opus":0.031137992940786726,"score_gpt":0.32161025780366836,"score_spread":0.29047226486288164,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2110915832","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9844822,0.00879822,0.000030466297,0.00024299994,0.0008146059,0.0008462182,0.00028766287,0.00043486545,0.0040627513],"genre_scores_gemma":[0.9904253,0.0012288772,0.00003088546,0.004077537,0.0030470407,0.00019351284,0.000076003096,0.00010830172,0.0008125762],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9961584,0.00021881581,0.0007360069,0.000490589,0.0010842253,0.0013119127],"domain_scores_gemma":[0.9969526,0.0004581727,0.0003705922,0.00046787655,0.0008669269,0.00088383956],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00054365053,0.0005278223,0.00076499267,0.00044512455,0.0008054821,0.000097776974,0.000111879046,0.00020869364,0.0003572179],"category_scores_gemma":[0.0034868573,0.0005127131,0.00016925664,0.0006954741,0.000073062474,0.0007110633,0.00022694434,0.00059995305,0.00029779895],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000113577495,0.0002282534,0.9350387,0.00023591377,0.000854957,0.000011995035,0.00014568478,0.00006218812,0.0001610213,0.000020625714,0.06096852,0.0021585852],"study_design_scores_gemma":[0.0019367152,0.00015748835,0.7450976,0.000095038915,0.00055247813,0.000012255678,0.00003875586,0.000019276564,0.00020521725,0.000031475174,0.25147215,0.0003815708],"about_ca_topic_score_codex":0.4115905,"about_ca_topic_score_gemma":0.18830593,"teacher_disagreement_score":0.22328457,"about_ca_system_score_codex":0.0018673438,"about_ca_system_score_gemma":0.00059884245,"threshold_uncertainty_score":0.99973243},"labels":[],"label_agreement":null},{"id":"W2113582001","doi":"10.3201/eid1807.111680","title":"Seroconversion to Seasonal Influenza Viruses after A(H1N1)pdm09 Virus Infection, Quebec, Canada","year":2012,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Influenza Virus Research Studies","field":"Medicine","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"BC Centre for Disease Control; Université Laval; Institut National de Santé Publique du Québec; Centre hospitalier universitaire de Québec","funders":"National Institute of Allergy and Infectious Diseases; National Institutes of Health","keywords":"Seroconversion; Serology; Virology; Virus; Influenza A virus; Pandemic; H1N1 influenza; Biology; Antibody; Seasonal influenza; Medicine; Immunology; Coronavirus disease 2019 (COVID-19); Internal medicine; Infectious disease (medical specialty); Disease","score_opus":0.02700453106777754,"score_gpt":0.3298640074438996,"score_spread":0.30285947637612204,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2113582001","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99263763,0.0031319389,0.000091712995,0.00043344282,0.0010016146,0.00078432134,0.00011668326,0.00040329582,0.001399381],"genre_scores_gemma":[0.9834617,0.00015545466,0.000026402282,0.013981458,0.0011059147,0.00040009976,0.000020307069,0.000076730794,0.00077195547],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99679893,0.00013762928,0.00043442642,0.00046360056,0.0010037845,0.0011616275],"domain_scores_gemma":[0.99753964,0.0001681889,0.00010624328,0.00049058435,0.00045193054,0.0012434057],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00018835696,0.00045680205,0.00049787044,0.0003810072,0.00050846965,0.00007027622,0.000113765826,0.00010312642,0.001647576],"category_scores_gemma":[0.000984563,0.00042556247,0.00021621419,0.0007491148,0.00012151144,0.000569381,0.00028166748,0.0003542576,0.0005333924],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00049515354,0.0003628187,0.93759596,0.00021808302,0.00032047206,0.000045583412,0.00041887537,0.00025199173,0.0005008758,0.000025941337,0.05826918,0.0014950335],"study_design_scores_gemma":[0.0009498751,0.00009164925,0.6768241,0.00012199541,0.0001921688,0.000016246608,0.00007129944,0.000016898934,0.0011351712,0.00000963608,0.32020816,0.00036279933],"about_ca_topic_score_codex":0.6797449,"about_ca_topic_score_gemma":0.70267195,"teacher_disagreement_score":0.26193896,"about_ca_system_score_codex":0.0014236328,"about_ca_system_score_gemma":0.0010817713,"threshold_uncertainty_score":0.99981964},"labels":[],"label_agreement":null},{"id":"W2114303542","doi":"10.3201/eid1711.110794","title":"Comparative Genomics of Vibrio cholerae from Haiti, Asia, and Africa","year":2011,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Vibrio bacteria research studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":156,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Public Health Agency of Canada","funders":"","keywords":"Vibrio cholerae; Outbreak; Pulsed-field gel electrophoresis; El Tor; Biology; Cholera; Genome; Molecular epidemiology; Pandemic; Genetics; Virology; Genotype; Gene; Coronavirus disease 2019 (COVID-19); Disease; Medicine; Bacteria; Infectious disease (medical specialty)","score_opus":0.024902983895665715,"score_gpt":0.2628487495420687,"score_spread":0.237945765646403,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2114303542","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9906984,0.0027333586,0.00023631175,0.000015848256,0.00008571547,0.00013365975,0.00016142755,0.000021972462,0.005913311],"genre_scores_gemma":[0.9990246,0.00044808708,0.0001656,0.000022088954,0.00011533492,0.000025645548,0.000059332222,0.000014137249,0.00012511745],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99925864,0.000055058146,0.00015148122,0.00025979464,0.00008337947,0.00019167633],"domain_scores_gemma":[0.9995206,0.000017736858,0.00007690056,0.00020487608,0.000080912476,0.000098947865],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000036263482,0.0001361434,0.00020556261,0.000046664733,0.00009742314,0.000015523146,0.00009057806,0.000044097043,0.0000634003],"category_scores_gemma":[0.00006545223,0.00013343197,0.0000664823,0.000060317052,0.00018459874,0.0000070432284,0.00019082661,0.00004914797,0.000005608732],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00034104998,0.00051963225,0.18389529,0.000069131966,0.0010423126,0.000009412612,0.0040059276,0.00005059042,0.80372316,0.00010776743,0.004615792,0.0016199318],"study_design_scores_gemma":[0.0015392114,0.00075575645,0.7559643,0.000045234505,0.00015451228,0.0000059598965,0.00088248384,0.00008437991,0.22331811,0.0010015969,0.0157268,0.0005216821],"about_ca_topic_score_codex":0.00018881973,"about_ca_topic_score_gemma":0.000071292336,"teacher_disagreement_score":0.58040506,"about_ca_system_score_codex":0.0000135379705,"about_ca_system_score_gemma":0.000048221977,"threshold_uncertainty_score":0.5441198},"labels":[],"label_agreement":null},{"id":"W2115258270","doi":"10.3201/eid1608.100483","title":"West Nile Virus Range Expansion into British Columbia","year":2010,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Mosquito-borne diseases and control","field":"Medicine","cited_by":46,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of British Columbia; BC Centre for Disease Control","funders":"Canadian Institutes of Health Research; Health Canada; British Columbia Centre for Disease Control; University of British Columbia; Michael Smith Health Research BC","keywords":"West Nile virus; Culex; Virology; Range (aeronautics); Biology; Transmission (telecommunications); Japanese encephalitis; Encephalitis; Virus; Flavivirus; Veterinary medicine; Limiting; Ecology; Medicine; Larva","score_opus":0.0034907919558386747,"score_gpt":0.23690853210831597,"score_spread":0.2334177401524773,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2115258270","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9930999,0.001836535,0.00006694885,0.0002092347,0.0012381364,0.00053260475,0.00009103881,0.0005791246,0.0023464402],"genre_scores_gemma":[0.9957154,0.00016015646,0.000032470714,0.0010938582,0.0010670393,0.00019664224,0.00011412496,0.000064595064,0.0015557326],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9984032,0.000042253374,0.00030573676,0.0004798449,0.00035501728,0.00041393968],"domain_scores_gemma":[0.9986019,0.0000578188,0.00009764426,0.0005115163,0.0001752108,0.0005558819],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00008392231,0.0001889235,0.00037536345,0.00007304261,0.00042914442,0.00030043029,0.00011747464,0.00011105651,0.0077058254],"category_scores_gemma":[0.000346431,0.00026480784,0.0003146157,0.00025154464,0.00011388238,0.00018023956,0.00006916573,0.00029446936,0.00019514389],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009358692,0.0011113732,0.8543043,0.00019052322,0.00012030557,0.00030169488,0.00010050017,0.000007235036,0.00655978,0.0000342125,0.048214022,0.08896244],"study_design_scores_gemma":[0.003293103,0.00025334096,0.94773495,0.00014346278,0.0005483691,0.00012990559,0.00007785976,0.00034637094,0.000063558415,0.0004132956,0.046611987,0.00038380057],"about_ca_topic_score_codex":0.056070972,"about_ca_topic_score_gemma":0.10151983,"teacher_disagreement_score":0.09343063,"about_ca_system_score_codex":0.000050449173,"about_ca_system_score_gemma":0.00017583802,"threshold_uncertainty_score":0.9999804},"labels":[],"label_agreement":null},{"id":"W2115757920","doi":"10.3201/eid1509.090272","title":"Predicting Phenotype and Emerging Strains among<i>Chlamydia trachomatis</i>Infections","year":2009,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Reproductive tract infections research","field":"Immunology and Microbiology","cited_by":95,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"National Eye Institute; National Institutes of Health; National Institute of Allergy and Infectious Diseases; European Commission; Wellcome Trust","keywords":"Chlamydia trachomatis; Trachoma; Lymphogranuloma venereum; Biology; Multilocus sequence typing; Genotype; Single-nucleotide polymorphism; Genetics; Virology; Chlamydia; Sexually transmitted disease; Gene; Medicine; Syphilis","score_opus":0.008483641417109413,"score_gpt":0.2708292758925342,"score_spread":0.2623456344754248,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2115757920","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9838874,0.0025685176,0.0007411396,0.0002546938,0.0009512826,0.0005368381,0.00005199966,0.0010250527,0.009983131],"genre_scores_gemma":[0.99839485,0.00023740302,0.00002234441,0.00008567332,0.0002586243,0.00007770391,0.000074236574,0.00004102341,0.0008081617],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99770236,0.0003015967,0.0004436583,0.00072402245,0.00011560677,0.00071277324],"domain_scores_gemma":[0.99880344,0.00020739736,0.00017245905,0.00049774104,0.0001932396,0.00012571517],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0003066025,0.0003601835,0.00037155373,0.000520762,0.0012539105,0.00011590672,0.00015892496,0.0001959676,0.0007943835],"category_scores_gemma":[0.00083356566,0.000366965,0.00017217618,0.00066003326,0.00037764956,0.000598571,0.000071482675,0.00066901895,0.00018765742],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000022935206,0.0008942101,0.93854123,0.000038722745,0.00030154551,0.000010816629,0.00069510215,0.00052117876,0.018443437,0.001269677,0.001188182,0.038072947],"study_design_scores_gemma":[0.0009812978,0.00029796845,0.99295217,0.000055003104,0.00016526443,0.00013566963,0.0002624762,0.000099807236,0.0011591614,0.0014022761,0.0020907535,0.000398161],"about_ca_topic_score_codex":0.00042111706,"about_ca_topic_score_gemma":0.00013325571,"teacher_disagreement_score":0.054410916,"about_ca_system_score_codex":0.000117372474,"about_ca_system_score_gemma":0.000096638345,"threshold_uncertainty_score":0.9998782},"labels":[],"label_agreement":null},{"id":"W2116706689","doi":"10.3201/eid1601.090369","title":"Projecting Global Occurrence of<i>Cryptococcus gattii</i>","year":2009,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Fungal Infections and Studies","field":"Medicine","cited_by":200,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"University at Albany; New York State Department of Health - Wadsworth Center; New York State Department of Health","keywords":"Cryptococcus gattii; Cryptococcosis; Cryptococcus neoformans; Biology; Outbreak; Cryptococcus; Pathogen; Niche; Ecology; Microbiology; Virology","score_opus":0.01221328787468743,"score_gpt":0.31069381125943124,"score_spread":0.2984805233847438,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2116706689","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.96891993,0.0016641865,0.00042905973,0.00035573862,0.0005576275,0.0004967596,0.00008414642,0.0004451596,0.02704739],"genre_scores_gemma":[0.99918437,0.00009938544,0.000079133904,0.00035179668,0.00018519736,0.00002773176,0.0000135630635,0.000006103493,0.000052703283],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9989446,0.000029829127,0.00028649214,0.00025644666,0.00020669868,0.0002759282],"domain_scores_gemma":[0.99929607,0.00004793735,0.00011433091,0.0002269372,0.00018692973,0.00012781833],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000068413305,0.00018064259,0.00032978872,0.000099619785,0.00022156206,0.000018616583,0.00004921553,0.00004315949,0.00007495136],"category_scores_gemma":[0.00033147662,0.0001584764,0.00020024026,0.00060130574,0.00007535718,0.00009917335,0.00002927738,0.00011736921,0.000023054006],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006375545,0.00072322215,0.96659714,0.0001345695,0.00011735643,0.000022261793,0.00013067118,0.00010561248,0.00052207435,0.0009673646,0.006290392,0.0243256],"study_design_scores_gemma":[0.0015471572,0.0013340065,0.98777133,0.00033829012,0.0004316543,0.00013393315,0.00022483148,0.00017670619,0.0006151271,0.0012651347,0.0058060284,0.00035581336],"about_ca_topic_score_codex":0.00011140556,"about_ca_topic_score_gemma":0.000012149443,"teacher_disagreement_score":0.030264452,"about_ca_system_score_codex":0.000093964714,"about_ca_system_score_gemma":0.000104086655,"threshold_uncertainty_score":0.646248},"labels":[],"label_agreement":null},{"id":"W2117647297","doi":"10.3201/eid0812.010317","title":"Identifying Reservoirs of Infection: A Conceptual and Practical Challenge","year":2002,"lang":"en","type":"review","venue":"Emerging infectious diseases","topic":"Zoonotic diseases and public health","field":"Medicine","cited_by":865,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Department for International Development; Wellcome Trust; University of Guelph","keywords":"Population; Biology; Disease; Transmission (telecommunications); Infectious disease (medical specialty); Computational biology; Risk analysis (engineering); Computer science; Medicine; Environmental health; Pathology","score_opus":0.12238953353303497,"score_gpt":0.41783237278658963,"score_spread":0.29544283925355463,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2117647297","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0003181904,0.9890403,0.0000680036,0.0002167274,0.00052707136,0.000959241,0.000087607725,0.0002180557,0.008564785],"genre_scores_gemma":[0.0036644088,0.9948475,0.000044436987,0.00008859331,0.00070377655,0.00013997246,0.00011612704,0.00008590826,0.0003093159],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9972604,0.0003074446,0.00090047595,0.0005909478,0.0004790987,0.00046165264],"domain_scores_gemma":[0.99756205,0.00045579427,0.00054684666,0.00052227674,0.00018033081,0.00073267304],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00024264243,0.00046970436,0.0019418951,0.00046407394,0.00018260666,0.000056425535,0.00005322528,0.0002868081,0.0013678467],"category_scores_gemma":[0.0011395672,0.00040580417,0.0006777493,0.0005313469,0.00031050807,0.00021187778,0.00013984626,0.00054936873,0.00005070885],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000028586144,0.0014322876,0.0019817862,0.09489533,0.0010373989,0.00027790052,0.00035504738,0.0000010844888,1.8532765e-8,0.00485461,0.005544857,0.8895911],"study_design_scores_gemma":[0.0007287257,0.00042444593,0.0003818123,0.012971148,0.0038449808,0.00046748915,0.000108660235,0.000025016096,2.4129516e-8,0.0001548529,0.9805421,0.0003507184],"about_ca_topic_score_codex":0.00017960109,"about_ca_topic_score_gemma":0.000013908654,"teacher_disagreement_score":0.9749973,"about_ca_system_score_codex":0.00015789966,"about_ca_system_score_gemma":0.0007987591,"threshold_uncertainty_score":0.99983937},"labels":[],"label_agreement":null},{"id":"W2118821194","doi":"10.3201/eid1508.081061","title":"Tactics and Economics of Wildlife Oral Rabies Vaccination, Canada and the United States","year":2009,"lang":"en","type":"review","venue":"Emerging infectious diseases","topic":"Rabies epidemiology and control","field":"Immunology and Microbiology","cited_by":105,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"National Wildlife Research Center; U.S. Department of Agriculture","keywords":"Rabies; Wildlife; Vaccination; Public health; Geography; Environmental health; Medicine; Virology; Biology; Ecology","score_opus":0.01048155614390268,"score_gpt":0.25930039932675253,"score_spread":0.24881884318284986,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2118821194","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.004007306,0.99450326,0.00001645001,0.00040619425,0.0003987163,0.00037838658,0.0001756226,0.000037488833,0.00007657833],"genre_scores_gemma":[0.005109122,0.99337876,0.0000022284544,0.00072696345,0.00003499158,0.000043062835,0.00049320183,0.000017961987,0.00019373026],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99810004,0.000802195,0.00057320757,0.0002639515,0.000017424145,0.00024316143],"domain_scores_gemma":[0.99720716,0.0019044053,0.00054727413,0.00023307523,0.00007453348,0.00003353942],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00027513088,0.00031285686,0.001359162,0.00014927308,0.00029426307,0.000015402644,0.00013321971,0.0002189334,0.00005104991],"category_scores_gemma":[0.0006567652,0.00021007481,0.0001441153,0.0001290254,0.00033498614,0.00005318624,0.000063649175,0.00030599043,0.0000021438864],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00021009588,0.00013354533,0.012841618,0.004046696,0.004325216,0.000006124474,0.0002529254,0.00034087952,1.3003171e-7,0.011794318,0.033434592,0.93261385],"study_design_scores_gemma":[0.0012088602,0.000053609325,0.0013002394,0.00032254276,0.0016268144,0.00006626721,0.000059855098,0.000024087643,1.8988173e-7,0.0012915824,0.99381256,0.00023339759],"about_ca_topic_score_codex":0.07082713,"about_ca_topic_score_gemma":0.05189958,"teacher_disagreement_score":0.96037793,"about_ca_system_score_codex":0.00006282627,"about_ca_system_score_gemma":0.00036077842,"threshold_uncertainty_score":0.96540076},"labels":[],"label_agreement":null},{"id":"W2119649681","doi":"10.3201/eid1708.060232","title":"<i>Streptococcus suis</i>Sequence Type 7 Outbreak, Sichuan, China","year":2006,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Streptococcal Infections and Treatments","field":"Medicine","cited_by":159,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal","funders":"","keywords":"Streptococcus suis; Outbreak; Multilocus sequence typing; Serotype; Biology; Virulence; Virology; Microbiology; Typing; Genotype; Molecular epidemiology; Gene; Genetics","score_opus":0.01222208686538806,"score_gpt":0.2887323172344308,"score_spread":0.27651023036904276,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2119649681","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.956265,0.00066134986,0.00011718794,0.00022594827,0.0006567408,0.0006780389,0.000050359595,0.0008340393,0.04051138],"genre_scores_gemma":[0.9963428,0.000049035625,0.000042077445,0.00016238277,0.0005326188,0.000150683,0.00020628035,0.00004891796,0.002465204],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9985224,0.000038350136,0.00031632106,0.00044578314,0.00024710275,0.00043006783],"domain_scores_gemma":[0.9990074,0.00005035763,0.000110138564,0.00044527807,0.00015548956,0.00023133292],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00004219351,0.00030492843,0.00033666193,0.00019334162,0.0003013393,0.000058590438,0.00006543999,0.000084253916,0.0011124773],"category_scores_gemma":[0.000107494176,0.00026666097,0.00023968045,0.0006014541,0.00011593438,0.000151956,0.000046965324,0.00016410093,0.00038222774],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000038473438,0.0009743948,0.98736143,0.00004789962,0.00013694125,0.00012430735,0.000016833652,0.00019329476,0.001080767,0.00068910554,0.0061813607,0.0031552177],"study_design_scores_gemma":[0.0017418716,0.0004274267,0.97927326,0.000097748736,0.00042972123,0.0001091291,0.000013198764,0.00013357222,0.0012051528,0.001384189,0.014875,0.0003097257],"about_ca_topic_score_codex":0.0019008148,"about_ca_topic_score_gemma":0.000091524016,"teacher_disagreement_score":0.040077843,"about_ca_system_score_codex":0.00018471444,"about_ca_system_score_gemma":0.00012377766,"threshold_uncertainty_score":0.99997854},"labels":[],"label_agreement":null},{"id":"W2120341230","doi":"10.3201/eid1810.120214","title":"Influenza Virus Infection in Nonhuman Primates","year":2012,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Influenza Virus Research Studies","field":"Medicine","cited_by":34,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"National Center for Research Resources; National Institute of Allergy and Infectious Diseases; Advanced Research Projects Agency; National Institutes of Health; St. Jude Children's Research Hospital; Connaught Fund; American Lebanese Syrian Associated Charities; University of Toronto","keywords":"Virology; Virus; Serology; Biology; Nonhuman primate; Influenza A virus; Orthomyxoviridae; Antibody; Immunology; Evolutionary biology","score_opus":0.04858800916689594,"score_gpt":0.385324090834711,"score_spread":0.33673608166781505,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2120341230","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9842822,0.005082591,0.00003519343,0.00006654881,0.0003564127,0.0005194655,0.000014057008,0.00044288044,0.009200677],"genre_scores_gemma":[0.9971929,0.000966202,0.000029930987,0.00089219806,0.00052632677,0.00020147124,0.000016423495,0.0000481661,0.00012633459],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99803835,0.00009997669,0.00037434668,0.00026861433,0.0004169469,0.0008017724],"domain_scores_gemma":[0.99901515,0.00011518048,0.00008983978,0.00031826197,0.00013765616,0.0003239152],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00027878172,0.0002643884,0.00037703742,0.0005959182,0.0002562555,0.000038274404,0.000059991973,0.000093823815,0.00040436318],"category_scores_gemma":[0.0008693537,0.00024430297,0.00015505294,0.0006091262,0.00013598087,0.0005095173,0.00012853349,0.00034428263,0.00039020946],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010505209,0.00079911295,0.99286854,0.0002459066,0.0001081665,0.0000125505785,0.00055174704,0.0001252313,0.0011335434,0.00023124514,0.0011503054,0.0026685966],"study_design_scores_gemma":[0.0015614735,0.00015317161,0.9741026,0.00012008352,0.00010570745,0.00001937114,0.000040019622,0.0000603653,0.0010434203,0.00012651009,0.022416282,0.00025095942],"about_ca_topic_score_codex":0.0015783992,"about_ca_topic_score_gemma":0.0002456127,"teacher_disagreement_score":0.021265976,"about_ca_system_score_codex":0.00040588435,"about_ca_system_score_gemma":0.00009097438,"threshold_uncertainty_score":0.9962386},"labels":[],"label_agreement":null},{"id":"W2121052380","doi":"10.3201/eid1511.090677","title":"Multicenter GeoSentinel Analysis of Rickettsial Diseases in International Travelers, 1996–2008","year":2009,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Vector-borne infectious diseases","field":"Immunology and Microbiology","cited_by":158,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Toronto General Hospital","funders":"U.S. Public Health Service; Centers for Disease Control and Prevention; International Society of Travel Medicine","keywords":"Rickettsiosis; Scrub typhus; Typhus; Bartonellosis; Spotted fever; Anaplasmosis; Doxycycline; Medicine; Rickettsia; Q fever; Boutonneuse fever; Ehrlichiosis; Virology; Internal medicine; Immunology; Biology; Serology; Bartonella henselae; Antibiotics; Tick; Microbiology; Virus","score_opus":0.006555836267868185,"score_gpt":0.25303238834343555,"score_spread":0.24647655207556737,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2121052380","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9934283,0.0029660866,0.00013334438,0.0001996466,0.0010381837,0.00029598342,0.00058151246,0.00029565307,0.0010613003],"genre_scores_gemma":[0.998199,0.00020987583,0.000008805649,0.00032548755,0.00011097347,0.00003781742,0.0008891858,0.000024485029,0.00019438379],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99779844,0.00022898606,0.00069076236,0.00057425705,0.00015237743,0.0005551623],"domain_scores_gemma":[0.99880743,0.00019886479,0.00031443711,0.0004129328,0.00016842263,0.000097914526],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.000100773344,0.0003603727,0.00068275986,0.0015407926,0.00014883417,0.000035730904,0.00032347385,0.00014578678,0.0018476446],"category_scores_gemma":[0.00043124403,0.00036740128,0.00063695223,0.0013076238,0.00019905898,0.00025811515,0.000073364296,0.0002196675,0.00008077279],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002454274,0.003366943,0.9814211,0.000020842808,0.0028175488,0.000030489315,0.0002537919,0.0019264094,0.004304057,0.00021447048,0.0013817137,0.004017175],"study_design_scores_gemma":[0.0023630243,0.00013715377,0.9923856,0.000045503082,0.0023286543,0.0000072307716,0.0001062462,0.00042623136,0.00057150784,0.0001318384,0.00113092,0.00036607194],"about_ca_topic_score_codex":0.0008076804,"about_ca_topic_score_gemma":0.00033576365,"teacher_disagreement_score":0.010964487,"about_ca_system_score_codex":0.00015061602,"about_ca_system_score_gemma":0.00009302426,"threshold_uncertainty_score":0.9998778},"labels":[],"label_agreement":null},{"id":"W2121406383","doi":"10.3201/eid1601.081758","title":"Methicillin-Resistant and -Susceptible<i>Staphylococcus aureus</i>Infections in Dogs","year":2009,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Antimicrobial Resistance in Staphylococcus","field":"Medicine","cited_by":74,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of Guelph","funders":"Ontario Veterinary College, University of Guelph","keywords":"Medicine; Staphylococcus aureus; Methicillin-resistant Staphylococcus aureus; Odds ratio; Antimicrobial; Staphylococcal infections; Internal medicine; Infection control; Intensive care medicine; Microbiology; Biology","score_opus":0.010320627395379327,"score_gpt":0.2833966096685259,"score_spread":0.2730759822731466,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2121406383","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9839537,0.002841288,0.0006562414,0.0017690399,0.00027903964,0.00073623785,0.000036637943,0.0005014514,0.009226335],"genre_scores_gemma":[0.99687755,0.0006847632,0.00019162406,0.0015930424,0.00023762688,0.0000445462,0.000025117468,0.000043773736,0.00030197538],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9977973,0.000105721854,0.0005224287,0.0006143249,0.00034132585,0.0006188892],"domain_scores_gemma":[0.9986719,0.00018631169,0.00014432891,0.00046378426,0.00016579416,0.00036788158],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00021787452,0.0003853136,0.0005794573,0.0006164496,0.00030043788,0.00007803799,0.000098504715,0.00016456367,0.0001707075],"category_scores_gemma":[0.0005119804,0.00037516502,0.00022402978,0.0008950172,0.00021394255,0.00019610282,0.000046870246,0.0004729126,0.0000346402],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005233125,0.0019567187,0.80517113,0.0002623134,0.0001676318,0.000373004,0.0005148254,0.00048038847,0.17025948,0.005087889,0.0059723407,0.009230946],"study_design_scores_gemma":[0.005866504,0.002179405,0.95078444,0.000897033,0.000618709,0.00005128118,0.00030287632,0.00030068745,0.002472332,0.007829225,0.027524535,0.0011729745],"about_ca_topic_score_codex":0.00041995244,"about_ca_topic_score_gemma":0.0005219409,"teacher_disagreement_score":0.16778715,"about_ca_system_score_codex":0.00023657725,"about_ca_system_score_gemma":0.00019973298,"threshold_uncertainty_score":0.99987},"labels":[],"label_agreement":null},{"id":"W2122494876","doi":"10.3201/eid2006.131438","title":"Rapid Spread and Diversification of Respiratory Syncytial Virus Genotype ON1, Kenya","year":2014,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Respiratory viral infections research","field":"Medicine","cited_by":89,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"Wellcome Trust","keywords":"Genotype; Biology; Virology; Phylogenetic tree; Virus; Molecular epidemiology; Gene; Genetics","score_opus":0.027487444660896684,"score_gpt":0.3154366296875139,"score_spread":0.2879491850266172,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2122494876","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99038273,0.0014963648,0.00057291274,0.00007500103,0.00021826696,0.0003761183,0.000019596398,0.00019271257,0.006666307],"genre_scores_gemma":[0.9990377,0.00019275074,0.000027575697,0.00025403083,0.00029802666,0.000032532495,0.000014100634,0.000030464333,0.00011282554],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99853855,0.00019426872,0.00031524015,0.00034071016,0.00035457916,0.00025664744],"domain_scores_gemma":[0.9988088,0.00014115123,0.00013007209,0.00043700548,0.00024154376,0.00024144864],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00027681576,0.00017159515,0.0003066804,0.00040699987,0.00023029334,0.000028939132,0.000078355835,0.00008741454,0.00037133144],"category_scores_gemma":[0.00079594826,0.0001649976,0.00011018601,0.00038587084,0.00024409367,0.0001728416,0.00008408991,0.00018075085,0.000075697375],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00034196762,0.00062838674,0.84885895,0.00042364953,0.00021263768,0.00001330298,0.00016983096,0.00009888738,0.05838914,0.0012446555,0.0027923465,0.086826265],"study_design_scores_gemma":[0.0024050446,0.0017613027,0.9185699,0.00012602766,0.0003263273,0.000018176008,0.000050678158,0.0006136213,0.014996533,0.0002916364,0.06052533,0.00031537193],"about_ca_topic_score_codex":0.0002324657,"about_ca_topic_score_gemma":0.000025714508,"teacher_disagreement_score":0.08651089,"about_ca_system_score_codex":0.00009897356,"about_ca_system_score_gemma":0.00011997015,"threshold_uncertainty_score":0.6728407},"labels":[],"label_agreement":null},{"id":"W2123186607","doi":"10.3201/eid1601.090729","title":"Ceftiofur Resistance in<i>Salmonella enterica</i>Serovar Heidelberg from Chicken Meat and Humans, Canada","year":2009,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Salmonella and Campylobacter epidemiology","field":"Agricultural and Biological Sciences","cited_by":429,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Institut National de Santé Publique du Québec; BC Centre for Disease Control; Saskatchewan Disease Control Laboratory; Public Health Agency of Canada","funders":"Health Canada; Public Health Agency; Public Health Agency of Canada; Agriculture and Agri-Food Canada; Canadian Food Inspection Agency","keywords":"Salmonella enterica; Serotype; Ceftiofur; Salmonella; Microbiology; Biology; Virology; Veterinary medicine; Antibiotic resistance; Medicine; Genetics; Bacteria; Antibiotics","score_opus":0.007078244161289694,"score_gpt":0.20463696459262062,"score_spread":0.19755872043133094,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2123186607","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99202496,0.0037796737,0.000002969956,0.0018267756,0.00021131182,0.00012691315,0.000094477815,0.000105108506,0.0018278208],"genre_scores_gemma":[0.9968867,0.00048009335,0.000016015996,0.0020300103,0.00028578076,0.000010606449,0.0001151264,0.0000019256481,0.00017379317],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9984794,0.00015970538,0.00031850062,0.00048255638,0.00016031899,0.0003994878],"domain_scores_gemma":[0.99931914,0.0002529656,0.000109349814,0.000100281315,0.000033005643,0.00018524106],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00007744003,0.00022486244,0.0003287283,0.000018151277,0.00020612327,0.000042670123,0.00016953143,0.00007023109,0.00019419339],"category_scores_gemma":[0.00010297137,0.00011408447,0.00006987426,0.00024747712,0.000050055736,0.00010498556,0.00004443923,0.00012760685,0.0000063937277],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00004699908,0.00010785876,0.9831499,0.000005440295,0.0000213844,0.000040310813,0.00006766888,0.000019468434,0.0047951755,0.00018511503,0.0055460953,0.006014574],"study_design_scores_gemma":[0.0002082701,0.0000694611,0.97437733,0.000033590044,0.000020567584,0.0000027530164,0.00008232892,0.000016369027,0.00006374034,0.0037051544,0.021169309,0.00025111227],"about_ca_topic_score_codex":0.23251629,"about_ca_topic_score_gemma":0.72547966,"teacher_disagreement_score":0.4929634,"about_ca_system_score_codex":0.0000713183,"about_ca_system_score_gemma":0.00002800215,"threshold_uncertainty_score":0.77259445},"labels":[],"label_agreement":null},{"id":"W2123248364","doi":"10.3201/eid1505.081174","title":"Real-Time Surveillance for Respiratory Disease Outbreaks, Ontario, Canada","year":2009,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Data-Driven Disease Surveillance","field":"Medicine","cited_by":30,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Queen's University","funders":"Ontario Ministry of Health and Long-Term Care","keywords":"Outbreak; Disease surveillance; Medicine; Public health surveillance; Coronavirus disease 2019 (COVID-19); Betacoronavirus; Environmental health; 2019-20 coronavirus outbreak; Geography; Virology; Disease; Intensive care medicine; Public health; Infectious disease (medical specialty); Pathology","score_opus":0.007862193783659054,"score_gpt":0.2529855301389011,"score_spread":0.24512333635524208,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2123248364","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98167783,0.0010438754,0.00009117001,0.0011221976,0.0007313784,0.0015205012,0.0023204288,0.0011707235,0.010321886],"genre_scores_gemma":[0.99276805,0.00004359081,0.00007346085,0.002796192,0.0005429776,0.0001317657,0.001142914,0.00006896133,0.0024321028],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99743235,0.00009691797,0.00049857394,0.0007222843,0.00055379956,0.00069609133],"domain_scores_gemma":[0.9972887,0.00018230407,0.00019851672,0.00093367556,0.00027581805,0.001120988],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00017540512,0.00041432117,0.0006201042,0.00014855976,0.00029965775,0.000052685187,0.00019307173,0.000058876292,0.00070664386],"category_scores_gemma":[0.0007187798,0.0004222705,0.00029756848,0.0002986897,0.00007294745,0.00017150532,0.000046526937,0.00015701822,0.00004692846],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0007551905,0.0004900499,0.80377346,0.00014515978,0.00014848527,0.00024791845,0.000040557094,0.00021332555,0.00034394927,0.00013534479,0.19042706,0.003279489],"study_design_scores_gemma":[0.00201965,0.00022519646,0.864471,0.00009500951,0.0001806675,0.0000068365093,0.000008858632,0.00016172498,0.000020729572,0.00021372837,0.13215141,0.0004451502],"about_ca_topic_score_codex":0.3670192,"about_ca_topic_score_gemma":0.6184438,"teacher_disagreement_score":0.2514246,"about_ca_system_score_codex":0.0010725864,"about_ca_system_score_gemma":0.0033771521,"threshold_uncertainty_score":0.9998229},"labels":[],"label_agreement":null},{"id":"W2124041958","doi":"10.3201/eid1602.090900","title":"Epidemiology of<i>Cryptococcus gattii</i>, British Columbia, Canada, 1999–2007","year":2010,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Fungal Infections and Studies","field":"Medicine","cited_by":264,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of British Columbia; BC Centre for Disease Control","funders":"","keywords":"Cryptococcus gattii; Cryptococcosis; Incidence (geometry); Medicine; Epidemiology; Population; Disease; Cryptococcus; Demography; Pediatrics; Internal medicine; Immunology; Environmental health; Biology","score_opus":0.008910557158293222,"score_gpt":0.2620190542205385,"score_spread":0.2531084970622453,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2124041958","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98706174,0.002292996,0.00006602944,0.00023059665,0.002437546,0.0003655297,0.00013805498,0.00016751775,0.007240019],"genre_scores_gemma":[0.99661183,0.00016142312,0.000109086875,0.00088343315,0.00053037633,0.000089598194,0.000033046334,0.000028168459,0.0015530256],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9986049,0.00006474976,0.00044813994,0.00031289295,0.00016625918,0.00040308145],"domain_scores_gemma":[0.99863166,0.00038312993,0.00015628994,0.00032117113,0.000235729,0.00027200874],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00017502689,0.00014479339,0.00056698726,0.00006373061,0.00033825153,0.000012486022,0.000065794964,0.00009002185,0.0014678081],"category_scores_gemma":[0.001587547,0.00019661893,0.00019456787,0.0002579887,0.00022048455,0.000056046727,0.0000567101,0.00033522476,0.000013574811],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000008430146,0.00021158694,0.9086608,0.00010517825,0.0001562092,0.00004582481,0.000012552419,0.000017978735,0.00013939587,0.00006815198,0.08798244,0.002591429],"study_design_scores_gemma":[0.00063966395,0.00015908717,0.9447435,0.00007244906,0.00018778903,0.00017530618,0.000038273905,0.00005324681,0.000020929732,0.00030759853,0.05341675,0.00018539194],"about_ca_topic_score_codex":0.92863435,"about_ca_topic_score_gemma":0.97052616,"teacher_disagreement_score":0.04189182,"about_ca_system_score_codex":0.0000808401,"about_ca_system_score_gemma":0.00045924546,"threshold_uncertainty_score":0.99944496},"labels":[],"label_agreement":null},{"id":"W2124961280","doi":"10.3201/eid1411.080386","title":"Novel Human Rhinoviruses and Exacerbation of Asthma in Children1","year":2008,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Respiratory viral infections research","field":"Medicine","cited_by":147,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Conference Board of Canada","funders":"U.S. Public Health Service; National Center for Immunization and Respiratory Diseases; Centers for Disease Control and Prevention","keywords":"Asthma; Asthma exacerbations; Rhinovirus; Exacerbation; Clade; Medicine; Molecular epidemiology; Virology; Biology; Immunology; Genotype; Phylogenetics; Genetics; Gene; Virus","score_opus":0.03359843460548147,"score_gpt":0.33572595887304024,"score_spread":0.3021275242675588,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2124961280","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9963785,0.0006501166,0.00015762149,0.000044185483,0.000049550796,0.00030544034,0.00001012436,0.00009895775,0.002305545],"genre_scores_gemma":[0.9994414,0.00012596734,0.000032893407,0.000084689964,0.000094874726,0.000033785047,0.000013529791,0.000022154582,0.0001507095],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9989707,0.000047209276,0.00029377628,0.00023262996,0.00025776535,0.00019791642],"domain_scores_gemma":[0.99944174,0.000050843195,0.000077454075,0.00021181515,0.00009575615,0.00012241218],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000101207064,0.00012770711,0.0002479411,0.000540286,0.00017880255,0.000011112632,0.000039731014,0.000053012238,0.00015811255],"category_scores_gemma":[0.00024926302,0.00012502889,0.000064778316,0.0004514991,0.00020138515,0.00017970761,0.00004643704,0.00016075515,0.000011088768],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00003430294,0.0006105352,0.97315145,0.00008596274,0.00003548034,0.000016279773,0.00014121113,0.00012705193,0.02387421,0.0003831272,0.00021618934,0.0013242231],"study_design_scores_gemma":[0.0016152891,0.00036955607,0.99447906,0.00008021927,0.00002118778,0.00010971839,0.000023141247,0.00009396082,0.0024722621,0.00006547653,0.00055905466,0.00011108756],"about_ca_topic_score_codex":0.000832121,"about_ca_topic_score_gemma":0.00011970664,"teacher_disagreement_score":0.02140195,"about_ca_system_score_codex":0.000078222816,"about_ca_system_score_gemma":0.000098474324,"threshold_uncertainty_score":0.509853},"labels":[],"label_agreement":null},{"id":"W2125397076","doi":"10.3201/eid1104.041126","title":"Bed Bug Infestations in an Urban Environment","year":2005,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Dermatological diseases and infestations","field":"Medicine","cited_by":241,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of Toronto; Toronto Public Health; St. Michael's Hospital","funders":"Canadian Institutes of Health Research; University of Toronto; Ontario Ministry of Health and Long-Term Care","keywords":"Bed bug; Environmental health; Population; Geography; Public health; Medicine; Ecology; Biology","score_opus":0.011140415771041528,"score_gpt":0.28277675471540775,"score_spread":0.27163633894436623,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2125397076","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9922112,0.00042694405,0.0002667453,0.0013562992,0.000066984314,0.0003375096,0.000049565162,0.0002588794,0.00502584],"genre_scores_gemma":[0.9976302,0.0001806174,0.0001984863,0.0013129816,0.00015094616,0.0001262481,0.00023149379,0.000021607255,0.00014742039],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.998905,0.00005625402,0.00030207855,0.00026582912,0.0001924621,0.00027838536],"domain_scores_gemma":[0.9992417,0.00005303157,0.000059657392,0.00026229932,0.00003551718,0.00034777325],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.000035542158,0.00015696386,0.00020266412,0.00019860038,0.00013635603,0.00003295498,0.00005331534,0.000046658406,0.0012894096],"category_scores_gemma":[0.00011091748,0.00014700294,0.00010581493,0.00020666939,0.00007577419,0.00039652988,0.000026434062,0.00011857027,0.0003288109],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000025961137,0.001851054,0.9856022,0.000030725063,0.000025316152,0.000046666675,0.00025155864,0.002412308,0.0001163629,0.002304303,0.0015357654,0.005797757],"study_design_scores_gemma":[0.0013408021,0.00019334858,0.96663135,0.00003738069,0.00012800973,0.000023576666,0.000109564404,0.0027389964,0.000031356074,0.00044873645,0.02810375,0.0002131089],"about_ca_topic_score_codex":0.000044363827,"about_ca_topic_score_gemma":0.000042604537,"teacher_disagreement_score":0.026567984,"about_ca_system_score_codex":0.00012611435,"about_ca_system_score_gemma":0.0000694508,"threshold_uncertainty_score":0.99962354},"labels":[],"label_agreement":null},{"id":"W2126368798","doi":"10.3201/eid1101.040606","title":"Human Parechovirus 3 and Neonatal Infections","year":2005,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Viral Infections and Immunology Research","field":"Medicine","cited_by":199,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Université Laval; Centre hospitalier universitaire de Québec","funders":"Centre Hospitalier Universitaire de Québec","keywords":"Serotype; Virology; Rash; Neonatal sepsis; Sepsis; Biology; Medicine; Microbiology; Internal medicine","score_opus":0.015635842610556505,"score_gpt":0.32803737845106434,"score_spread":0.31240153584050784,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2126368798","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9869798,0.0026959507,0.00016017421,0.0007393538,0.00014677698,0.00024201853,0.000012626064,0.0004203535,0.008602992],"genre_scores_gemma":[0.99744135,0.00037601104,0.000029137282,0.0003135876,0.00034886523,0.00007268213,0.000024936911,0.000025038838,0.0013684161],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9990792,0.000048047288,0.00018770332,0.0002572485,0.00013031927,0.0002974705],"domain_scores_gemma":[0.9994113,0.000033651137,0.000039081267,0.0002344962,0.0000924592,0.00018905646],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00007467831,0.00015133634,0.00020125124,0.00030865814,0.00060479116,0.00004885684,0.00003718577,0.00007736475,0.00071692927],"category_scores_gemma":[0.0001222655,0.00014185596,0.00010373478,0.00029988174,0.00019216057,0.00023258239,0.00007172773,0.00028436087,0.00016002142],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000026672793,0.000724499,0.88813955,0.00005268275,0.00023450883,0.000022581533,0.0001372672,0.00007178733,0.0022688268,0.0012587842,0.004677123,0.10238569],"study_design_scores_gemma":[0.003186576,0.0013591718,0.74940246,0.00008860306,0.00032019944,0.00062056165,0.00014054467,0.00040728113,0.0009674656,0.0005933806,0.24248363,0.00043013605],"about_ca_topic_score_codex":0.0002122023,"about_ca_topic_score_gemma":0.00011142412,"teacher_disagreement_score":0.2378065,"about_ca_system_score_codex":0.00009376419,"about_ca_system_score_gemma":0.000057949503,"threshold_uncertainty_score":0.7849873},"labels":[],"label_agreement":null},{"id":"W2127217664","doi":"10.3201/eid1309.070081","title":"Frequent Travelers and Rate of Spread of Epidemics","year":2007,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"COVID-19 epidemiological studies","field":"Mathematics","cited_by":94,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"Wellcome Trust","keywords":"Outbreak; Pandemic; Attack rate; Population; Demography; Air travel; Coronavirus disease 2019 (COVID-19); Environmental health; Geography; Medicine; Virology; Infectious disease (medical specialty); Disease; Aviation; Internal medicine","score_opus":0.09588410252270088,"score_gpt":0.3927719624522325,"score_spread":0.2968878599295316,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2127217664","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9854862,0.0010633585,0.011737511,0.00020186759,0.00011418775,0.00020066075,0.000026897229,0.00010516223,0.0010641591],"genre_scores_gemma":[0.99865264,0.00032937396,0.00070875377,0.00020906306,0.00004963442,0.000007663839,0.0000018363813,0.0000143883735,0.0000266476],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99871624,0.000117683216,0.00058891164,0.00021182999,0.0001109869,0.00025435016],"domain_scores_gemma":[0.9949321,0.0043308167,0.00033940544,0.00019922652,0.00009256643,0.00010587321],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.0009800183,0.00015804383,0.00050056016,0.000097968965,0.00007346991,0.0000031735653,0.00007931916,0.00004856041,0.00004499974],"category_scores_gemma":[0.008412313,0.00013003802,0.0001391254,0.00018825894,0.0002232541,0.00004499538,0.0000823248,0.0000877144,0.0000013464283],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000054335607,0.00031081008,0.9556971,0.000686584,0.00022621796,0.000009210437,0.00040894674,0.00015959398,0.0013876653,0.03421356,0.0017973214,0.0050486345],"study_design_scores_gemma":[0.0009280646,0.00028454154,0.64203197,0.00023211955,0.0003637208,0.000005834375,0.00034172228,0.00028121722,0.0032224741,0.3506078,0.0013207408,0.0003797933],"about_ca_topic_score_codex":0.00040263013,"about_ca_topic_score_gemma":0.000106474065,"teacher_disagreement_score":0.31639424,"about_ca_system_score_codex":0.000052060317,"about_ca_system_score_gemma":0.000021996624,"threshold_uncertainty_score":0.9999403},"labels":[],"label_agreement":null},{"id":"W2127367542","doi":"10.3201/eid1611.100628","title":"Lymphotropism of Merkel Cell Polyomavirus Infection, Nova Scotia, Canada","year":2010,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Polyomavirus and related diseases","field":"Medicine","cited_by":52,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Public Health Agency of Canada; Dalhousie University","funders":"National Cancer Institute; National Institute of Allergy and Infectious Diseases; Health Canada; National Institutes of Health","keywords":"Merkel cell polyomavirus; Lymph; Lymphoma; Biology; Pathology; Merkel cell carcinoma; Chronic lymphocytic leukemia; Virology; Merkel cell; Polyomavirus Infections; Leukemia; Immunology; Medicine; Carcinoma; BK virus","score_opus":0.004157018907253725,"score_gpt":0.2317076657401431,"score_spread":0.22755064683288936,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2127367542","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9836288,0.0015641374,0.000035213045,0.00017536739,0.0023889777,0.00028591737,0.00012227164,0.00022074948,0.011578542],"genre_scores_gemma":[0.9982201,0.00011632363,0.000028228955,0.0004564359,0.00038987497,0.000010745997,0.000056663794,0.00005710371,0.000664566],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99822485,0.00003899553,0.0004581618,0.00036652616,0.000461922,0.00044955386],"domain_scores_gemma":[0.9984143,0.00007649866,0.00022256348,0.0005112488,0.00021471591,0.0005606843],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.000054489195,0.00030622102,0.00043571717,0.0002502236,0.0001719234,0.000020887579,0.00010231422,0.00014245334,0.0014481453],"category_scores_gemma":[0.00020710146,0.00027608746,0.00026708498,0.00048435316,0.00017275906,0.00011804281,0.000058199123,0.000319842,0.000058960017],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000090895395,0.00095790403,0.9617435,0.00026239484,0.00022470813,0.00009861504,0.000042417956,0.00011952854,0.021164782,0.00019312299,0.012942618,0.0021595254],"study_design_scores_gemma":[0.0033378769,0.00023588119,0.9573647,0.00014525349,0.001095408,0.00016020251,0.000035188175,0.00019357,0.020560179,0.00014279531,0.016187312,0.0005416722],"about_ca_topic_score_codex":0.7456068,"about_ca_topic_score_gemma":0.38995266,"teacher_disagreement_score":0.35565415,"about_ca_system_score_codex":0.00013493595,"about_ca_system_score_gemma":0.001681128,"threshold_uncertainty_score":0.9999691},"labels":[],"label_agreement":null},{"id":"W2127879872","doi":"10.3201/eid1509.080231","title":"Highly Pathogenic Avian Influenza Virus A (H7N3) in Domestic Poultry, Saskatchewan, Canada, 2007","year":2009,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Influenza Virus Research Studies","field":"Medicine","cited_by":80,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Ministry of Agriculture; Canadian Food Inspection Agency","funders":"National Institute of Allergy and Infectious Diseases; National Institutes of Health; U.S. Public Health Service; Canadian Food Inspection Agency; U.S. Department of Health and Human Services","keywords":"Influenza A virus subtype H5N1; Waterfowl; Outbreak; Highly pathogenic; Virus; Virology; Biology; Avian influenza virus; Influenza A virus; Serology; Pathogenicity; Phylogenetic tree; Veterinary medicine; Medicine; Microbiology; Ecology; Genetics","score_opus":0.017677651706672674,"score_gpt":0.32123110232443297,"score_spread":0.3035534506177603,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2127879872","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9878289,0.0062817177,0.000021124277,0.0006883208,0.0003668789,0.00074180844,0.00013300887,0.0003147769,0.0036234595],"genre_scores_gemma":[0.99147624,0.0001794276,0.00004200415,0.0070701903,0.00038728726,0.00009250367,0.00003142183,0.000048487185,0.0006724306],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.996761,0.00013421458,0.00061174296,0.0005758835,0.00085108634,0.0010660248],"domain_scores_gemma":[0.9982679,0.00019662506,0.00013051329,0.0005669768,0.000253557,0.00058443745],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00021275523,0.0004383953,0.0006444448,0.00049119774,0.00029715712,0.0000504177,0.00018448454,0.00011187581,0.00029802366],"category_scores_gemma":[0.0011045765,0.00041407812,0.00018969,0.00090781576,0.00012217417,0.00017751579,0.00008594616,0.00050928054,0.00009847405],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00050194794,0.0009623708,0.95556545,0.00022092255,0.00025093794,0.0033892957,0.0006944206,0.00081786345,0.0031007272,0.00006979252,0.019669065,0.014757219],"study_design_scores_gemma":[0.0036566143,0.0004498963,0.9691942,0.00027695738,0.00019587876,0.00013807628,0.0006637834,0.000096264186,0.00015333098,0.0003144435,0.024318408,0.00054218085],"about_ca_topic_score_codex":0.30051112,"about_ca_topic_score_gemma":0.37156707,"teacher_disagreement_score":0.07105593,"about_ca_system_score_codex":0.001082819,"about_ca_system_score_gemma":0.0020531395,"threshold_uncertainty_score":0.9998311},"labels":[],"label_agreement":null},{"id":"W2128062115","doi":"10.3201/eid1711.110720","title":"Drug-Resistance Mechanisms in Vibrio cholerae O1 Outbreak Strain, Haiti, 2010","year":2011,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Vibrio bacteria research studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":97,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Public Health Agency of Canada","funders":"","keywords":"Vibrio cholerae; Microbiology; Outbreak; Drug resistance; Biology; Antibiotic resistance; Strain (injury); Virology; Antibiotics; Bacteria; Genetics","score_opus":0.011424586733708256,"score_gpt":0.24631121356041327,"score_spread":0.23488662682670503,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2128062115","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9852874,0.001987905,0.0015036915,0.0002618813,0.00067536894,0.00045515184,0.0002134747,0.00013971864,0.009475355],"genre_scores_gemma":[0.99621904,0.00034842655,0.00024356559,0.00023265912,0.00018028177,0.00013497124,0.00010126314,0.000045256667,0.002494563],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9983988,0.00010326388,0.0002613003,0.00051031064,0.00019973672,0.00052662916],"domain_scores_gemma":[0.9992016,0.000014660956,0.00008607315,0.00042047483,0.00010416189,0.0001730309],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.000138878,0.00025972872,0.00023148178,0.00013228545,0.0001667206,0.0000428321,0.00022980364,0.00008245457,0.00018838928],"category_scores_gemma":[0.00021050558,0.0002659007,0.00013671053,0.00017925492,0.00012929917,0.00001682606,0.00022919677,0.00013427081,0.00003748522],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0008398636,0.0021978072,0.1884643,0.00045746504,0.0008839015,0.00024015854,0.002303616,0.00015034911,0.74428064,0.0028143714,0.05185049,0.005517012],"study_design_scores_gemma":[0.00425594,0.00045284,0.8458321,0.00023053368,0.00012324248,0.000022071947,0.0006954395,0.00005671635,0.09602158,0.006075888,0.044472624,0.0017610014],"about_ca_topic_score_codex":0.0002450688,"about_ca_topic_score_gemma":0.001961886,"teacher_disagreement_score":0.6573678,"about_ca_system_score_codex":0.000046869947,"about_ca_system_score_gemma":0.00009879618,"threshold_uncertainty_score":0.9999793},"labels":[],"label_agreement":null},{"id":"W2129196986","doi":"10.3201/eid1407.070602","title":"Anthropogenic Influence on Prevalence of 2 Amphibian Pathogens","year":2008,"lang":"en","type":"letter","venue":"Emerging infectious diseases","topic":"Zoonotic diseases and public health","field":"Medicine","cited_by":44,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Laurentian University","funders":"Natural Sciences and Engineering Research Council of Canada; Natural Environment Research Council; Sight Research UK","keywords":"Amphibian; Biology; Environmental health; Medicine; Ecology","score_opus":0.013857338213311787,"score_gpt":0.28530945734934976,"score_spread":0.27145211913603795,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2129196986","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.7724181,0.006899072,0.000045942154,0.19928545,0.002040802,0.0025144268,0.002935581,0.00100446,0.012856181],"genre_scores_gemma":[0.6463638,0.004426669,0.0000251031,0.3430208,0.003383801,0.00010193859,0.0005269607,0.00016120588,0.0019897046],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99672097,0.00018796085,0.00063625805,0.0007718511,0.0009511174,0.00073182205],"domain_scores_gemma":[0.9973869,0.00025329343,0.00047095792,0.0010892765,0.00033758953,0.00046202313],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00010754629,0.0005394953,0.00087301637,0.00049781374,0.00022583343,0.000023591181,0.00023365495,0.00043371305,0.0015220563],"category_scores_gemma":[0.0007085786,0.0004976143,0.00061798433,0.00046740423,0.00038638563,0.000108904984,0.00007276017,0.0009855011,0.00013233683],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000091809765,0.00073121727,0.1653701,0.00865398,0.0003359429,0.0014779905,0.00012273097,0.00016540015,0.000017395249,0.000041292427,0.81789345,0.0050986856],"study_design_scores_gemma":[0.0018869635,0.0018650357,0.28045404,0.003285633,0.001691349,0.00040088355,0.000032903874,0.000076721335,0.000034165274,0.00014964142,0.70909804,0.0010246412],"about_ca_topic_score_codex":0.00016467157,"about_ca_topic_score_gemma":0.0000033194456,"teacher_disagreement_score":0.14373536,"about_ca_system_score_codex":0.00021723291,"about_ca_system_score_gemma":0.0012436055,"threshold_uncertainty_score":0.9997476},"labels":[],"label_agreement":null},{"id":"W2129532417","doi":"10.3201/eid1607.100106","title":"<i>Cryptococcus gattii</i>Genotype VGIIa Infection in Man, Japan, 2007","year":2010,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Fungal Infections and Studies","field":"Medicine","cited_by":68,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"University of Tokyo","keywords":"Cryptococcus gattii; Outbreak; Genotype; Strain (injury); Virulence; Virology; Cryptococcosis; Biology; Cryptococcus; Microbiology; Genetics; Gene","score_opus":0.00832122377905569,"score_gpt":0.27727783591215543,"score_spread":0.26895661213309974,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2129532417","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9713633,0.0004593655,0.0000926954,0.0003225569,0.0026054892,0.00055943354,0.000013309515,0.0004410248,0.024142843],"genre_scores_gemma":[0.99695194,0.00033848427,0.00005316927,0.0005914741,0.0008135945,0.00019202457,0.00002866484,0.000044735403,0.000985891],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9984545,0.00004622292,0.00037528927,0.0004171688,0.00024062183,0.0004662151],"domain_scores_gemma":[0.9989912,0.000091736285,0.00009712718,0.00039674048,0.00018843579,0.00023474563],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00015509903,0.00029202085,0.00039218285,0.00044618404,0.00033333953,0.000048493566,0.00005554257,0.00014170248,0.0015748685],"category_scores_gemma":[0.0004127906,0.00027419726,0.00020946238,0.00062127865,0.00012971617,0.0001883889,0.00006844818,0.00058376696,0.0004983214],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000058227804,0.0006587677,0.9830697,0.00010644192,0.000093000424,0.000030919855,0.00011633482,0.000099486824,0.002620455,0.000473677,0.009305791,0.003367203],"study_design_scores_gemma":[0.001361449,0.00028099705,0.943149,0.00007788046,0.00015980468,0.00008071681,0.000029884774,0.00016290984,0.00027979424,0.0004064803,0.05370939,0.00030170567],"about_ca_topic_score_codex":0.0015810487,"about_ca_topic_score_gemma":0.0018938471,"teacher_disagreement_score":0.0444036,"about_ca_system_score_codex":0.00011364433,"about_ca_system_score_gemma":0.000102328435,"threshold_uncertainty_score":0.99997103},"labels":[],"label_agreement":null},{"id":"W2132565683","doi":"10.3201/eid1711.110159","title":"Group A Streptococcus emm Gene Types in Pharyngeal Isolates, Ontario, Canada, 2002–2010","year":2011,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Streptococcal Infections and Treatments","field":"Medicine","cited_by":77,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of Toronto; University Health Network","funders":"","keywords":"Hypervariable region; Pharyngitis; Streptococcus pyogenes; Biology; Streptococcus; Group A; Acute Pharyngitis; Molecular epidemiology; Pathogen; Microbiology; Epidemiology; Pharynx; Gene; Virology; Genetics; Medicine; Genotype; Bacteria; Internal medicine; Staphylococcus aureus","score_opus":0.016682398569480443,"score_gpt":0.23910593008571945,"score_spread":0.222423531516239,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2132565683","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9852729,0.00065134105,0.000027180336,0.000036667494,0.0007322669,0.0006676131,0.00005061067,0.00017453583,0.012386905],"genre_scores_gemma":[0.9971654,0.000040521594,0.00006145748,0.00020764874,0.00013039492,0.0002480481,0.000085890904,0.000037239235,0.0020234336],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9986103,0.000037103964,0.00032530297,0.00041409046,0.00017135369,0.0004418411],"domain_scores_gemma":[0.99912477,0.000035218494,0.000089399,0.00036137176,0.00007165592,0.00031757046],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.000040979805,0.0002801239,0.00035231502,0.00021512581,0.00015294073,0.000018731034,0.00006934568,0.0000772184,0.0072825025],"category_scores_gemma":[0.000044922614,0.00025645862,0.00013560647,0.0003349327,0.00004938436,0.00013236517,0.000044866618,0.00023248306,0.00007074626],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000084468884,0.0011166029,0.99100554,0.00002730286,0.0002431777,0.00028244886,0.00020759788,0.000014253933,0.000110366935,0.00005379422,0.0041958597,0.0026585795],"study_design_scores_gemma":[0.0022059428,0.0003741602,0.991166,0.00007854439,0.00027610056,0.00005414691,0.00003523566,0.00005241676,0.0003510676,0.000133278,0.0050183637,0.00025474193],"about_ca_topic_score_codex":0.9516979,"about_ca_topic_score_gemma":0.97072905,"teacher_disagreement_score":0.019031165,"about_ca_system_score_codex":0.00074236526,"about_ca_system_score_gemma":0.0006342904,"threshold_uncertainty_score":0.99998873},"labels":[],"label_agreement":null},{"id":"W2133135448","doi":"10.3201/eid0803.010159","title":"Associations between Indicators of Livestock Farming Intensity and Incidence of Human Shiga Toxin-Producing <i>Escherichia Coli</i> Infection","year":2002,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Escherichia coli research studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":106,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Health Canada; Cegep de Saint Hyacinthe; Université de Montréal; University of Guelph","funders":"","keywords":"Livestock; Manure; Spatial epidemiology; Veterinary medicine; Poisson regression; Agriculture; Population; Shiga toxin; Escherichia coli; Biology; Environmental health; Epidemiology; Ecology; Medicine","score_opus":0.015240812797249335,"score_gpt":0.28200210200762305,"score_spread":0.26676128921037373,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2133135448","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9981608,0.00089324615,0.00013467124,0.000040139068,0.00006517002,0.00021462908,0.000048229376,0.00003567581,0.0004074703],"genre_scores_gemma":[0.99922895,0.00039813056,0.00005845217,0.000045178494,0.00014537349,0.000022444128,0.00003101922,0.000019136818,0.000051294224],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9988087,0.00010940877,0.00032701634,0.00031980345,0.0002080452,0.00022707199],"domain_scores_gemma":[0.9990943,0.000058993595,0.00029943846,0.00024050105,0.00020495661,0.000101820944],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00020336785,0.00015768426,0.00030518326,0.00015376294,0.00027860745,0.000016078742,0.00009465715,0.00008283829,0.000013155365],"category_scores_gemma":[0.001060493,0.00017104081,0.000096001095,0.0003939341,0.00021092969,0.000017297622,0.00023731755,0.00013801013,9.2025647e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000051081884,0.00011548279,0.8850379,0.000066809356,0.00015853228,5.064787e-7,0.00031130537,0.00003900495,0.113373145,0.00002194935,0.00025371506,0.0006165637],"study_design_scores_gemma":[0.00027460835,0.0003569702,0.96675825,0.000052436673,0.00010234003,8.039596e-7,0.00004896973,0.000031180596,0.031964347,0.00007005306,0.00016824056,0.0001718044],"about_ca_topic_score_codex":0.00063167687,"about_ca_topic_score_gemma":0.00017351212,"teacher_disagreement_score":0.08172037,"about_ca_system_score_codex":0.00003680135,"about_ca_system_score_gemma":0.000035452988,"threshold_uncertainty_score":0.69748414},"labels":[],"label_agreement":null},{"id":"W2135103431","doi":"10.3201/eid1212.060231","title":"Methicillin-resistant<i>Staphylococcus aureus</i>Colonization in Veterinary Personnel","year":2006,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Antimicrobial Resistance in Staphylococcus","field":"Medicine","cited_by":177,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Mount Sinai Hospital; University of Guelph","funders":"Ontario Veterinary College, University of Guelph; OVC Pet Trust; American College of Veterinary Internal Medicine","keywords":"Veterinary medicine; Colonization; Methicillin-resistant Staphylococcus aureus; Medicine; Staphylococcus aureus; Odds ratio; Staphylococcal infections; Staphylococcus intermedius; Microbiology; Staphylococcus; Biology; Internal medicine; Bacteria","score_opus":0.012681923779917864,"score_gpt":0.2753765507260875,"score_spread":0.26269462694616963,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2135103431","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9902154,0.0018745038,0.00091773225,0.00040378043,0.00035331995,0.0006348087,0.000060976,0.00042859907,0.0051108603],"genre_scores_gemma":[0.9979439,0.000105723055,0.00023231689,0.0004996002,0.00043446312,0.0000893235,0.000109648914,0.000076263575,0.0005087798],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9978464,0.00013314081,0.0005218987,0.00054644624,0.0003855533,0.0005665277],"domain_scores_gemma":[0.9988954,0.00016148703,0.00017217977,0.0004157701,0.00019423236,0.00016090501],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00018181527,0.0003432487,0.00047923665,0.00048328907,0.00025379783,0.000056494842,0.00012443097,0.0001623067,0.00020984905],"category_scores_gemma":[0.0003279164,0.00035375817,0.00023978167,0.0009345635,0.00017811655,0.00017833362,0.00006174681,0.00031578296,0.000058423724],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.001039245,0.0017643026,0.6675432,0.00071100413,0.00013389536,0.0010514689,0.0006230911,0.003879186,0.31043157,0.0015927167,0.009861491,0.0013688629],"study_design_scores_gemma":[0.005498788,0.00090983085,0.95122844,0.0008419995,0.0004543441,0.00002454619,0.00067025685,0.0011362392,0.004163936,0.0016977218,0.032206796,0.0011670927],"about_ca_topic_score_codex":0.0009549846,"about_ca_topic_score_gemma":0.0003578027,"teacher_disagreement_score":0.30626762,"about_ca_system_score_codex":0.0003795903,"about_ca_system_score_gemma":0.00020346174,"threshold_uncertainty_score":0.99989146},"labels":[],"label_agreement":null},{"id":"W2135138895","doi":"10.3201/eid2009.131668","title":"<i>Pneumocystis jirovecii</i> Pneumonia in Patients with or without AIDS, France","year":2014,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Pneumocystis jirovecii pneumonia detection and treatment","field":"Medicine","cited_by":320,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Sherbrooke","funders":"Pfizer","keywords":"Pneumocystis jirovecii; Pneumocystis pneumonia; Medicine; Pneumonia; AIDS-Related Opportunistic Infections; Virology; Intensive care medicine; Immunology; Human immunodeficiency virus (HIV); Internal medicine; Sida; Viral disease","score_opus":0.003385402971708212,"score_gpt":0.2223592064951314,"score_spread":0.2189738035234232,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2135138895","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99508226,0.00009808765,0.00031908657,0.00022327807,0.0004037811,0.00083440146,0.000031117415,0.00050845265,0.0024995208],"genre_scores_gemma":[0.99746287,0.000029131865,0.00011007214,0.00084280333,0.00016281153,0.00018649845,0.000048740487,0.00009399431,0.0010630676],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9975993,0.00011093402,0.00044698594,0.00068939687,0.00057500787,0.00057835446],"domain_scores_gemma":[0.9985497,0.00012217385,0.00018322057,0.0005853792,0.00014139072,0.00041813336],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00009051251,0.00046688208,0.00070976384,0.00037191567,0.00020943121,0.000058005207,0.000110325585,0.00009898943,0.00016841854],"category_scores_gemma":[0.00022185723,0.00034153,0.00014415095,0.0006920857,0.00011099021,0.0002157729,0.000051148312,0.0002827099,0.00013694252],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00071610865,0.0013533547,0.9849565,0.00010602329,0.000113809525,0.000053484015,0.000070713344,0.0001638298,0.00026505344,0.000051997096,0.00007268366,0.012076447],"study_design_scores_gemma":[0.010093325,0.0027564457,0.97722536,0.00031071677,0.00025351424,0.00006610814,0.000019009212,0.00044602563,0.00014390869,0.00005272357,0.008193016,0.00043983833],"about_ca_topic_score_codex":0.0002007916,"about_ca_topic_score_gemma":0.0001829509,"teacher_disagreement_score":0.011636608,"about_ca_system_score_codex":0.00022379775,"about_ca_system_score_gemma":0.000111150584,"threshold_uncertainty_score":0.9999037},"labels":[],"label_agreement":null},{"id":"W2135240937","doi":"10.3201/eid1411.071368","title":"Domestic Pigs and Japanese Encephalitis Virus Infection, Australia","year":2008,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Mosquito-borne diseases and control","field":"Medicine","cited_by":79,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"U.S. Fish and Wildlife Service; Directorate for Biological Sciences; Bavarian Nordic; Thailand Science Research and Innovation; National Center for Genetic Engineering and Biotechnology; Department for International Development; Animal and Plant Health Agency; California Department of Fish and Wildlife; Liverpool John Moores University; Thailand Science Park; Chulalongkorn University; Government of the United Kingdom; University of Toronto; National Research Foundation; European Centre for Disease Prevention and Control; Eisai; National Institute for Health Research Health Protection Research Unit; University of Oxford; National Institute for Health and Care Research; Queensland Health; Ministère de l'Education Nationale, de l'Enseignement Superieur et de la Recherche; National Research Foundation of Ukraine; Medical Research Council; Department of Health and Social Care; National Institutes of Health; Agricultural Research Development Agency; National Institute of Allergy and Infectious Diseases; Agence Nationale de la Recherche; Ministry of Science and Higher Education of the Russian Federation; Wellcome Trust; AstraZeneca; Royal Veterinary College; Bill and Melinda Gates Foundation; McMaster University; Berlin Institute of Health; U.S. Department of Health and Human Services","keywords":"Japanese encephalitis; Virology; Virus; Relocation; Transmission (telecommunications); Encephalitis; Biology; Host (biology); Veterinary virology; Ecology","score_opus":0.015849168194830444,"score_gpt":0.29278907751301314,"score_spread":0.2769399093181827,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2135240937","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9953405,0.001885658,0.0000864839,0.00014508858,0.00039593503,0.00038637742,0.00005592215,0.00039634443,0.0013076533],"genre_scores_gemma":[0.995905,0.0010435892,0.000009853004,0.00048567122,0.0004911129,0.00012174018,0.000054744607,0.000036518966,0.0018518064],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99849975,0.00006144125,0.00030041288,0.00043720214,0.00029615237,0.00040505335],"domain_scores_gemma":[0.99880755,0.00007632488,0.00009301999,0.00033619904,0.00014098165,0.0005459535],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.000053018488,0.00027643875,0.00037744924,0.00018304096,0.00038075028,0.00003888076,0.000050543218,0.000077171804,0.001322176],"category_scores_gemma":[0.00017152478,0.00025950838,0.00020243405,0.0003134575,0.0002060661,0.0001912566,0.00004392867,0.00015272187,0.000116667674],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000117585274,0.000522373,0.9915655,0.00018529255,0.000179889,0.00050051336,0.00031037538,0.00006221226,0.0005138566,0.00023101365,0.004016839,0.0017945373],"study_design_scores_gemma":[0.0022556654,0.00034309438,0.9891545,0.00008685333,0.0005574061,0.0010325804,0.00004737805,0.00017762936,0.000021136651,0.000197156,0.0058079115,0.0003186977],"about_ca_topic_score_codex":0.0036177847,"about_ca_topic_score_gemma":0.00010761046,"teacher_disagreement_score":0.003510174,"about_ca_system_score_codex":0.00006954313,"about_ca_system_score_gemma":0.000102790145,"threshold_uncertainty_score":0.9999857},"labels":[],"label_agreement":null},{"id":"W2136834217","doi":"10.3201/eid1702.100190","title":"Phocine Distemper Virus in Seals, East Coast, United States, 2006","year":2011,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Virology and Viral Diseases","field":"Medicine","cited_by":34,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"","keywords":"Virus; Morbillivirus; Virology; Biology; Hemagglutinin (influenza); Paramyxoviridae; Measles virus; Mononegavirales; Viral disease; Vaccination; Measles","score_opus":0.02010785369940954,"score_gpt":0.26465625492491546,"score_spread":0.24454840122550592,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2136834217","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9934462,0.0018355971,0.0000651637,0.0002961617,0.0002537426,0.0003524177,0.00026985467,0.00038112054,0.0030997605],"genre_scores_gemma":[0.99614906,0.00034828455,0.000011674715,0.0020257498,0.00015226443,0.00007725513,0.0006481903,0.000047348447,0.00054016407],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9984638,0.00013246457,0.00035647827,0.00037822255,0.0002009302,0.00046808794],"domain_scores_gemma":[0.9990701,0.000040448544,0.00009444894,0.0003435641,0.000090781796,0.00036066287],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.000091592265,0.0002810842,0.00038511681,0.00043202433,0.00015279198,0.0000133919475,0.0000925635,0.00010029803,0.0012439399],"category_scores_gemma":[0.00015050813,0.00025167392,0.00015448332,0.0006210437,0.00016907779,0.00015582498,0.00006360381,0.00023167265,0.00017058075],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00075085583,0.0019332025,0.9845486,0.00015866474,0.00014613844,0.00038705798,0.00073754776,0.00011885309,0.0002429658,0.00027861586,0.0098116975,0.0008857825],"study_design_scores_gemma":[0.0033090413,0.00050643535,0.98378146,0.00017539598,0.00038131632,0.000046625566,0.00042135923,0.0004568347,0.00017041399,0.0007512918,0.009651448,0.00034840236],"about_ca_topic_score_codex":0.003046602,"about_ca_topic_score_gemma":0.0009563442,"teacher_disagreement_score":0.002702887,"about_ca_system_score_codex":0.00008929682,"about_ca_system_score_gemma":0.00010223998,"threshold_uncertainty_score":0.99999356},"labels":[],"label_agreement":null},{"id":"W2137656767","doi":"10.3201/eid1511.090945","title":"Illness in Long-Term Travelers Visiting GeoSentinel Clinics","year":2009,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Travel-related health issues","field":"Medicine","cited_by":106,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Toronto General Hospital; University of Ottawa","funders":"Biotechnology and Biological Sciences Research Council; U.S. Public Health Service; National Institute for Health and Care Research; Centers for Disease Control and Prevention; International Society of Travel Medicine","keywords":"Medicine; Travel medicine; Diarrhea; Malaria; Traveler's diarrhea; Irritable bowel syndrome; Entamoeba histolytica; Pediatrics; Eosinophilia; Environmental health; Immunology; Family medicine; Internal medicine; Psychiatry","score_opus":0.01231475764928086,"score_gpt":0.3350156150965537,"score_spread":0.32270085744727284,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2137656767","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9933857,0.0018145096,0.00020969147,0.0009972834,0.0004875803,0.00047894378,0.000008313278,0.00051296037,0.0021050551],"genre_scores_gemma":[0.9972486,0.0004589873,0.00004620954,0.0014329504,0.00044749185,0.000018359277,0.000064329404,0.00004349449,0.00023959756],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9978957,0.00007919466,0.00064547086,0.00044081378,0.00030905835,0.0006297299],"domain_scores_gemma":[0.9989335,0.000112482856,0.00016904458,0.0003291509,0.000092926195,0.0003629157],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00020375455,0.00026948797,0.00047330168,0.00039851264,0.00019400743,0.000033535678,0.000090024056,0.00014865966,0.00019823764],"category_scores_gemma":[0.0003059491,0.00027651511,0.00016837481,0.0005628585,0.000057245335,0.0001465971,0.000022225579,0.00044260974,0.00008045503],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001029378,0.0006176181,0.9265366,0.00023006227,0.00004368644,0.0003459314,0.0006774226,0.00016010218,0.00012486041,0.00016247184,0.00013117112,0.070867136],"study_design_scores_gemma":[0.0025690387,0.00023337762,0.99493235,0.0006011899,0.00014880327,0.000066963294,0.00011872311,0.00038757783,0.00009031827,0.0002413817,0.00031030562,0.00029998252],"about_ca_topic_score_codex":0.00009470672,"about_ca_topic_score_gemma":0.000038290033,"teacher_disagreement_score":0.07056715,"about_ca_system_score_codex":0.0001688379,"about_ca_system_score_gemma":0.00016478397,"threshold_uncertainty_score":0.9999687},"labels":[],"label_agreement":null},{"id":"W2137795915","doi":"10.3201/eid1205.051424","title":"Human Bocavirus Infection, Canada","year":2006,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Respiratory viral infections research","field":"Medicine","cited_by":245,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Saskatchewan Health; Canadian Science Centre for Human and Animal Health","funders":"","keywords":"Human bocavirus; Virology; Biology; Medicine; Microbiology; Respiratory tract infections","score_opus":0.015286670167098216,"score_gpt":0.32149831745655916,"score_spread":0.30621164728946093,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2137795915","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.95880216,0.00037733963,0.00011000398,0.00021369728,0.00041030388,0.00037533342,0.000018976421,0.00050352956,0.039188653],"genre_scores_gemma":[0.9951814,0.000011492954,0.000006497518,0.00050245126,0.00077530986,0.00010398359,0.000055252614,0.000050864503,0.0033127824],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.998181,0.000088059176,0.00037246142,0.00036547045,0.00052366004,0.0004693454],"domain_scores_gemma":[0.9989343,0.00003704825,0.00008706629,0.00042380887,0.00025722772,0.00026053828],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00009813611,0.00023356547,0.00028467033,0.00032275342,0.000623281,0.000070025104,0.00006525933,0.00006986475,0.00095757254],"category_scores_gemma":[0.00015375474,0.00022988305,0.00014427489,0.0007061315,0.0001067688,0.00016688847,0.000052536816,0.00028109577,0.00009447687],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000012700966,0.00034683087,0.922389,0.00007830396,0.00006778205,0.00010323069,0.0000043224422,0.00063029974,0.0021085541,0.00094344886,0.07227521,0.001040371],"study_design_scores_gemma":[0.00097274256,0.00020915527,0.88489974,0.000039004994,0.00010838129,0.00007431701,0.0000068109125,0.000059004036,0.0012199349,0.00045658136,0.111697674,0.00025664037],"about_ca_topic_score_codex":0.77365243,"about_ca_topic_score_gemma":0.5688693,"teacher_disagreement_score":0.20478314,"about_ca_system_score_codex":0.0007018656,"about_ca_system_score_gemma":0.0007602568,"threshold_uncertainty_score":0.9999557},"labels":[],"label_agreement":null},{"id":"W2139859327","doi":"10.3201/eid1201.050396","title":"Real-time Forecast of Multiphase Outbreak","year":2006,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"COVID-19 epidemiological studies","field":"Mathematics","cited_by":75,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"Mitacs; National Science Council","keywords":"Outbreak; Confidence interval; Coronavirus disease 2019 (COVID-19); Phase (matter); Statistics; Public health surveillance; Public health; Medicine; Geography; Demography; Virology; Internal medicine; Mathematics; Infectious disease (medical specialty); Pathology; Disease","score_opus":0.060899735071312015,"score_gpt":0.36735221440780297,"score_spread":0.30645247933649095,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2139859327","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98327214,0.00023655964,0.0019106541,0.00024906005,0.00014639947,0.00034696804,0.00010301861,0.00070706545,0.01302812],"genre_scores_gemma":[0.9979493,0.000051311003,0.0010110114,0.00007403018,0.00022317853,0.00005647736,0.000017754843,0.00003150015,0.0005854121],"study_design_codex":"observational","study_design_gemma":"theoretical_or_conceptual","domain_scores_codex":[0.9985008,0.00012348866,0.0005255964,0.00030479743,0.00020611197,0.00033916644],"domain_scores_gemma":[0.9971823,0.0020180563,0.00027612573,0.00032154348,0.000113038,0.000088936766],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002260372,0.00022844606,0.0005107512,0.000104080944,0.00017600253,0.000012321559,0.0001252542,0.00006334854,0.00033807554],"category_scores_gemma":[0.0031649584,0.00018760927,0.00026463973,0.00024074849,0.00014463044,0.00007530414,0.00013018702,0.00007669525,0.000050923314],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000092778275,0.0023207704,0.8854244,0.0005789747,0.00027114665,0.000039271254,0.00020785898,0.0020573256,0.0027306853,0.02629095,0.075969234,0.004016649],"study_design_scores_gemma":[0.0038297686,0.00057261565,0.40931925,0.0003202908,0.0008671237,0.000016999822,0.00012711696,0.0067384196,0.0013015097,0.56272405,0.01279925,0.0013835768],"about_ca_topic_score_codex":0.0019139809,"about_ca_topic_score_gemma":0.00012317205,"teacher_disagreement_score":0.5364331,"about_ca_system_score_codex":0.000097468655,"about_ca_system_score_gemma":0.000029159082,"threshold_uncertainty_score":0.76504844},"labels":[],"label_agreement":null},{"id":"W2140959008","doi":"10.3201/eid1212.060331","title":"Evaluating Detection of an Inhalational Anthrax Outbreak","year":2006,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Bacillus and Francisella bacterial research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":44,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"McGill University; U.S. Department of Veterans Affairs","keywords":"Outbreak; Medicine; Public health surveillance; Public health; Virology; Pathology","score_opus":0.012824974281543612,"score_gpt":0.3140716650405594,"score_spread":0.3012466907590158,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2140959008","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.996852,0.00045861804,0.0013021855,0.0000090045,0.00018516771,0.00011253064,0.00003853185,0.00002620357,0.0010158006],"genre_scores_gemma":[0.9990191,0.000021549193,0.00006348736,0.000013987851,0.0005485536,0.000019530575,0.00018734687,0.000016745478,0.000109703455],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9991438,0.00007665292,0.00018861763,0.00022750597,0.00019294403,0.00017052019],"domain_scores_gemma":[0.9994984,0.000013676594,0.000079948055,0.00018259902,0.00016538381,0.00005996511],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014148637,0.00009805502,0.000099212266,0.00006352115,0.000132608,0.000021158668,0.00006699447,0.00006345868,0.00007473264],"category_scores_gemma":[0.0001282352,0.00009933567,0.00007630134,0.00011299963,0.000064792766,0.0000092862765,0.000042575313,0.0000432458,0.0000049798923],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000751537,0.0001717799,0.02492821,0.000022415143,0.000020535845,8.159945e-7,0.000008773496,0.0018002883,0.95049447,0.000051568546,0.000048641035,0.022377342],"study_design_scores_gemma":[0.0018537354,0.001432287,0.38826102,0.000027932721,0.00007457194,0.00002502282,0.000036226404,0.005029216,0.59669274,0.0014151039,0.0046825535,0.0004695864],"about_ca_topic_score_codex":0.0002865833,"about_ca_topic_score_gemma":0.0001541994,"teacher_disagreement_score":0.3633328,"about_ca_system_score_codex":0.000015597541,"about_ca_system_score_gemma":0.00006285186,"threshold_uncertainty_score":0.40507913},"labels":[],"label_agreement":null},{"id":"W2141021700","doi":"10.3201/eid1610.100249","title":"Mobile Phone–based Infectious Disease Surveillance System, Sri Lanka","year":2010,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Data-Driven Disease Surveillance","field":"Medicine","cited_by":117,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary; University of Victoria","funders":"University of Peradeniya; University of Victoria; Infectious Diseases Society of America","keywords":"Sri lanka; Disease surveillance; Infectious disease (medical specialty); Mobile phone; Medicine; Internet privacy; Virology; Medical emergency; Computer security; Environmental health; Disease; World Wide Web; Geography; Computer science; Telecommunications; Pathology","score_opus":0.004918977340039656,"score_gpt":0.25353617125530875,"score_spread":0.2486171939152691,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2141021700","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9757787,0.0012617786,0.0005923514,0.00012092689,0.0030004825,0.001447443,0.0014008621,0.004508757,0.011888689],"genre_scores_gemma":[0.99626863,0.00006379756,0.00006515025,0.0006614146,0.0010175473,0.0005211266,0.0010257235,0.00012815479,0.00024845314],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9964866,0.00021475261,0.0006600611,0.0010031916,0.00077410234,0.00086128566],"domain_scores_gemma":[0.9958824,0.00024230298,0.00031547731,0.0016757313,0.00041833165,0.0014657819],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.0003116397,0.0006214747,0.00084896723,0.00043392935,0.00044713152,0.00013697277,0.0002913381,0.00015176849,0.0009413998],"category_scores_gemma":[0.0009768398,0.00060821575,0.00053238036,0.0008513606,0.00028543407,0.00026745512,0.00013779328,0.00057475007,0.000880315],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0004469233,0.0011779862,0.9859225,0.0011167707,0.00021306737,0.00049749657,0.00010620954,0.0009425138,0.0010850871,0.00024611133,0.0055298693,0.0027154302],"study_design_scores_gemma":[0.008208948,0.0005190235,0.84916466,0.0004837969,0.0007361243,0.00018271488,0.00017692674,0.008313593,0.00030049408,0.000106169915,0.13012248,0.0016850698],"about_ca_topic_score_codex":0.00024001862,"about_ca_topic_score_gemma":0.00021749747,"teacher_disagreement_score":0.13675788,"about_ca_system_score_codex":0.00024613776,"about_ca_system_score_gemma":0.0006376392,"threshold_uncertainty_score":0.99997187},"labels":[],"label_agreement":null},{"id":"W2141224922","doi":"10.3201/eid1404.070489","title":"Chagas Disease, France","year":2008,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Trypanosoma species research and implications","field":"Medicine","cited_by":75,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Chagas disease; Latin Americans; Triatominae; Endemic diseases; Geography; Disease; Neglected tropical diseases; Medicine; Demography; Virology; Trypanosoma cruzi; Political science; Parasite hosting; Pathology","score_opus":0.01577750001212152,"score_gpt":0.28999349469339075,"score_spread":0.2742159946812692,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2141224922","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97575825,0.0028849298,0.0005833335,0.003132392,0.00021310223,0.00044896806,0.00008416518,0.00064271333,0.016252138],"genre_scores_gemma":[0.991751,0.0007256475,0.000036516507,0.00067240006,0.00042968185,0.00012240777,0.00006681285,0.000028106992,0.006167395],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9988618,0.000022999006,0.00016059316,0.00027015992,0.00033310291,0.0003513269],"domain_scores_gemma":[0.9987099,0.00004405273,0.000037378646,0.0004318872,0.0001254061,0.00065133587],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0000054526927,0.0001366221,0.00017596195,0.00014965911,0.0004050754,0.000015835609,0.00008077209,0.000027219243,0.00100179],"category_scores_gemma":[0.00033561463,0.00012559217,0.00015905387,0.0003939342,0.000177144,0.00012826457,0.000042818865,0.00013552855,0.00044972773],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006919498,0.0006995403,0.95069844,0.000091193375,0.00008657718,0.00020239623,0.00007774739,0.000024426447,0.001974934,0.0016541529,0.041145377,0.0032759986],"study_design_scores_gemma":[0.0006418348,0.000081534854,0.8837199,0.000029492785,0.00004104666,0.000089807625,0.000009038626,0.00009737456,0.00007354184,0.00019447782,0.11490331,0.00011860037],"about_ca_topic_score_codex":0.00004571009,"about_ca_topic_score_gemma":0.0000030649462,"teacher_disagreement_score":0.07375793,"about_ca_system_score_codex":0.000058296555,"about_ca_system_score_gemma":0.00022655637,"threshold_uncertainty_score":0.9999114},"labels":[],"label_agreement":null},{"id":"W2143225304","doi":"10.3201/eid1805.110235","title":"Epidemic of Invasive Pneumococcal Disease, Western Canada, 2005–2009","year":2012,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Pneumonia and Respiratory Infections","field":"Medicine","cited_by":30,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of British Columbia; BC Centre for Disease Control; Saskatchewan Disease Control Laboratory; University of Alberta; Dalhousie University; Provincial Laboratory of Public Health","funders":"Imperial College London; University of Alberta; Wellcome Trust","keywords":"Serotype; Multilocus sequence typing; Outbreak; Pneumococcal disease; Typing; Pneumococcal infections; Disease surveillance; Medicine; Virology; Disease; Molecular epidemiology; Genotype; Biology; Streptococcus pneumoniae; Microbiology; Internal medicine; Genetics; Gene","score_opus":0.01212911124715534,"score_gpt":0.2678431188474944,"score_spread":0.2557140076003391,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2143225304","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.993999,0.0018823346,0.00005925355,0.0009500043,0.0009256217,0.00035893198,0.00014929668,0.00016437435,0.0015111854],"genre_scores_gemma":[0.9972894,0.00014601761,0.0000021664343,0.001280887,0.00060816016,0.000064047235,0.000042922376,0.000037979993,0.00052839733],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9983474,0.00010318616,0.00040463047,0.00023113306,0.00032902227,0.00058462605],"domain_scores_gemma":[0.99813944,0.00018857642,0.00017427134,0.0003732673,0.00012027434,0.0010041733],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00010907491,0.00024231015,0.0004067728,0.00019267555,0.00018491698,0.000008962519,0.00007857076,0.00006133458,0.0002754021],"category_scores_gemma":[0.0005211061,0.00021713278,0.00021116562,0.00027285045,0.00010965166,0.00018910687,0.000051277744,0.00019202172,0.000042741554],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000023119876,0.00046020895,0.98953986,0.00021083288,0.00013901273,0.00003098401,0.000050783296,0.00015107218,0.0037488611,0.00006448655,0.005254968,0.0003258054],"study_design_scores_gemma":[0.00058537564,0.00007127589,0.964654,0.00015877021,0.0004438083,0.00004729304,0.000044745502,0.000016768447,0.00036992395,0.0000381886,0.033346858,0.0002229399],"about_ca_topic_score_codex":0.018423235,"about_ca_topic_score_gemma":0.0408464,"teacher_disagreement_score":0.02809189,"about_ca_system_score_codex":0.00023837756,"about_ca_system_score_gemma":0.001199899,"threshold_uncertainty_score":0.98811316},"labels":[],"label_agreement":null},{"id":"W2143904433","doi":"10.3201/eid1601.091118","title":"Food Reservoir for <i>Escherichia coli</i> Causing Urinary Tract Infections","year":2009,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Urinary Tract Infections Management","field":"Medicine","cited_by":300,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph; Armand Frappier Museum; Public Health Agency of Canada; McGill University","funders":"Canadian Institutes of Health Research; Public Health Agency; Public Health Agency of Canada; McGill University","keywords":"Escherichia coli; Microbiology; Urinary system; Biology; Medicine; Internal medicine; Genetics","score_opus":0.019050848421071288,"score_gpt":0.29275377364147304,"score_spread":0.27370292522040174,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2143904433","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97493744,0.0006510806,0.00459376,0.0020627854,0.00073859474,0.0015683841,0.000046471283,0.0013242275,0.014077256],"genre_scores_gemma":[0.9964336,0.000118683056,0.00030955224,0.0012759123,0.000678669,0.0003116741,0.00009808163,0.000067059496,0.00070675806],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9980921,0.00006989048,0.00044128508,0.0005186545,0.00029635485,0.0005816915],"domain_scores_gemma":[0.9985516,0.00016324938,0.00016510588,0.0005715425,0.00021374343,0.00033472732],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00017067928,0.00036286123,0.0004145876,0.0004952316,0.00075634767,0.0000915919,0.000080959755,0.000106044565,0.00017853433],"category_scores_gemma":[0.0003186121,0.0003837944,0.00042555304,0.0008133377,0.00006731478,0.00041447478,0.000044955104,0.0002938288,0.000037724836],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0020090016,0.22717136,0.67621475,0.0017633141,0.0028174564,0.0009342955,0.0010055089,0.01694999,0.005655037,0.009991292,0.042396568,0.013091398],"study_design_scores_gemma":[0.0063591637,0.062368963,0.7363607,0.00038310993,0.0022526768,0.0009858143,0.00017361881,0.0014270616,0.0005082122,0.0037916952,0.18423988,0.0011490897],"about_ca_topic_score_codex":0.000037449034,"about_ca_topic_score_gemma":0.000012959498,"teacher_disagreement_score":0.1648024,"about_ca_system_score_codex":0.00032957594,"about_ca_system_score_gemma":0.00016466004,"threshold_uncertainty_score":0.9998614},"labels":[],"label_agreement":null},{"id":"W2146873558","doi":"10.3201/eid1604.091435","title":"Livestock-associated Methicillin-Resistant<i>Staphylococcus aureus</i>Sequence Type 398 in Humans, Canada","year":2010,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Antimicrobial Resistance in Staphylococcus","field":"Medicine","cited_by":119,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Health Sciences Centre; Saskatchewan Disease Control Laboratory; Royal University Hospital; Public Health Agency of Canada; Sunnybrook Health Science Centre; Canadian Science Centre for Human and Animal Health","funders":"","keywords":"SCCmec; Staphylococcus aureus; Methicillin-resistant Staphylococcus aureus; Biology; Livestock; Microbiology; Population; Panton–Valentine leukocidin; Staphylococcal infections; Leukocidin; Palindromic sequence; Veterinary medicine; Virology; Palindrome; Medicine; Gene; Genetics; Genome; Bacteria; Environmental health","score_opus":0.013651594144072304,"score_gpt":0.27969283861713123,"score_spread":0.26604124447305894,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2146873558","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99291766,0.00075892714,0.000022528795,0.00064280606,0.0012596108,0.0006490072,0.00017952766,0.00031586198,0.0032540637],"genre_scores_gemma":[0.9973535,0.00011379112,0.0000901626,0.0012911244,0.0002514366,0.00005448847,0.000107410466,0.000084607556,0.00065350445],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99715006,0.00012847733,0.00061752775,0.00066135364,0.00063022925,0.0008123642],"domain_scores_gemma":[0.99785197,0.00032206447,0.00026034666,0.0006804764,0.00045720415,0.0004279254],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0002770696,0.00043878943,0.00064629666,0.00030680132,0.00031724985,0.000058031204,0.00027060177,0.00023025331,0.00050777354],"category_scores_gemma":[0.0024939028,0.00044433557,0.00018065528,0.0011171779,0.0002674899,0.00014469323,0.00008193255,0.0010503308,0.000033016924],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00027168085,0.0005822509,0.6933271,0.00019293971,0.0001789054,0.0006218374,0.00020659123,0.00021577963,0.28620127,0.00071654137,0.016939044,0.0005460361],"study_design_scores_gemma":[0.0032073106,0.00043189045,0.9400357,0.00066763785,0.00044950776,0.000006362497,0.00026966466,0.00017314703,0.0051599843,0.0008779947,0.047448132,0.0012726629],"about_ca_topic_score_codex":0.22768237,"about_ca_topic_score_gemma":0.78971237,"teacher_disagreement_score":0.56203,"about_ca_system_score_codex":0.0006341231,"about_ca_system_score_gemma":0.0023309796,"threshold_uncertainty_score":0.99980086},"labels":[],"label_agreement":null},{"id":"W2147043842","doi":"10.3201/eid/1706.101756","title":"Characterization and Prevalence of a New Porcine Calicivirus in Swine, United States","year":2011,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Viral gastroenteritis research and epidemiology","field":"Medicine","cited_by":13,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"Ohio Agricultural Research and Development Center, Ohio State University; National Institutes of Health; National Pork Board; National Institute of Allergy and Infectious Diseases; Ohio State University","keywords":"Calicivirus; Feline calicivirus; Caliciviridae; Virology; Biology; Reverse transcriptase; Zoonotic disease; Polymerase chain reaction; Genetics; Disease; Gene; Norovirus; Virus; Medicine; Pathology","score_opus":0.026108296517919783,"score_gpt":0.2953319835982634,"score_spread":0.2692236870803436,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2147043842","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99835044,0.00032157797,0.00068689743,0.00023382739,0.000038799742,0.00018698204,0.000040184426,0.000044359673,0.00009695312],"genre_scores_gemma":[0.9972625,0.0018962565,0.000046692883,0.00030792714,0.000046436973,0.0000120803315,0.00013226115,0.000010739724,0.00028510482],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99923825,0.00007196288,0.00023686221,0.00015615296,0.00008489091,0.00021188406],"domain_scores_gemma":[0.9995648,0.000014156303,0.00006861826,0.00011182728,0.00005245505,0.00018813365],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00008300832,0.00008972208,0.00021914445,0.00027539593,0.000021122803,0.0000031175073,0.000032663032,0.00002830375,0.0002777416],"category_scores_gemma":[0.0003407451,0.0000803688,0.000032212734,0.00024185602,0.00007039795,0.00008260652,0.000033716784,0.00007924419,0.0000035597525],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00024701125,0.00016698411,0.99117476,0.00031541582,0.000022879482,0.000027677936,0.00031638102,0.000008512717,0.0046202447,0.000030804575,0.00022805233,0.00284129],"study_design_scores_gemma":[0.0010173491,0.0005496671,0.9966829,0.00019618626,0.00003591735,0.000026142556,0.000030000621,0.00061173475,0.0002940278,0.000115924144,0.0003860492,0.000054146632],"about_ca_topic_score_codex":0.0022683986,"about_ca_topic_score_gemma":0.000082258826,"teacher_disagreement_score":0.0055081085,"about_ca_system_score_codex":0.0000208138,"about_ca_system_score_gemma":0.000038150225,"threshold_uncertainty_score":0.34291553},"labels":[],"label_agreement":null},{"id":"W2147160441","doi":"10.3201/eid1701.101821","title":"How Safe Is Our Food?","year":2011,"lang":"en","type":"letter","venue":"Emerging infectious diseases","topic":"Salmonella and Campylobacter epidemiology","field":"Agricultural and Biological Sciences","cited_by":78,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Disease; Public health; Environmental health; Medicine; Disease control; Business; Geography; Pathology","score_opus":0.031084274665758933,"score_gpt":0.23015628489226836,"score_spread":0.19907201022650942,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2147160441","genre_codex":"commentary","genre_gemma":"commentary","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"commentary","genre_consensus":"commentary","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.14860661,0.0027627235,0.000007467713,0.83818835,0.002899487,0.0004558583,0.00090471155,0.0007808925,0.005393901],"genre_scores_gemma":[0.35881037,0.0003656139,0.000006166828,0.61895174,0.013855302,0.00010701153,0.0010083404,0.00001031741,0.00688514],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99764055,0.00026886837,0.00030175023,0.0007769973,0.00025569793,0.00075613376],"domain_scores_gemma":[0.9990418,0.00019397518,0.0003055219,0.00019306965,0.00009806533,0.00016758847],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00008816388,0.0005157265,0.00060762104,0.00004342332,0.00029985502,0.0001417757,0.00045731326,0.0007125815,0.0010098561],"category_scores_gemma":[0.0001398347,0.00021285133,0.00055838784,0.0002656862,0.000058979556,0.00013536692,0.00014304726,0.00078241044,0.00026129186],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000055373284,0.0000474264,0.04503958,0.00003343153,0.00012305715,0.000050074388,0.000028724233,1.62378e-7,0.00010014568,0.000016697506,0.9456586,0.008896519],"study_design_scores_gemma":[0.000093202194,0.00033579083,0.034594465,0.0000372991,0.00014511083,0.000029562187,0.00006197547,0.000001454126,0.000032521326,0.002044067,0.96205336,0.00057119055],"about_ca_topic_score_codex":0.00033410633,"about_ca_topic_score_gemma":0.000106352185,"teacher_disagreement_score":0.2192366,"about_ca_system_score_codex":0.000052691856,"about_ca_system_score_gemma":0.000018463612,"threshold_uncertainty_score":0.9999034},"labels":[],"label_agreement":null},{"id":"W2147307982","doi":"10.3201/eid1106.050118","title":"Rifampicin Resistance in Tuberculosis Outbreak, London, England","year":2005,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Tuberculosis Research and Epidemiology","field":"Medicine","cited_by":97,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Centers for Disease Control and Prevention; McGill University","keywords":"Medicine; Psychological intervention; Family medicine; Public health; Antibiotic resistance; Antimicrobial; Environmental health; Gerontology; Antibiotics; Nursing","score_opus":0.0112070837795599,"score_gpt":0.3007220692352248,"score_spread":0.2895149854556649,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2147307982","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.96905005,0.0059144003,0.00008083994,0.009295713,0.00013194345,0.00035270135,0.00002372492,0.00023712977,0.014913478],"genre_scores_gemma":[0.99399054,0.0011190937,0.00016422536,0.0023943267,0.0006416284,0.00009630361,0.00004907381,0.0000348967,0.0015099122],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.997973,0.00021476028,0.0004328486,0.0004447492,0.00027515076,0.0006594813],"domain_scores_gemma":[0.99874985,0.00029829837,0.00006513319,0.00039942213,0.00009573559,0.00039152958],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00032823213,0.00022610342,0.00047982746,0.00038564816,0.00012000704,0.000028660936,0.000096101896,0.00010682199,0.00040869662],"category_scores_gemma":[0.0014372711,0.0002011749,0.0001748851,0.00047171625,0.00010414044,0.0002309284,0.00005623926,0.00033781287,0.00017776841],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00027050293,0.00048369318,0.9769361,0.00011618642,0.00009297811,0.00008439654,0.00020407946,0.00022367912,0.00023329663,0.00044407163,0.013130426,0.0077805994],"study_design_scores_gemma":[0.0030687002,0.00014072547,0.8352823,0.00014979595,0.00008316724,0.000039673745,0.000037657417,0.0003226666,0.0001303475,0.00046444358,0.16004607,0.00023443263],"about_ca_topic_score_codex":0.0005717263,"about_ca_topic_score_gemma":0.0046063224,"teacher_disagreement_score":0.14691564,"about_ca_system_score_codex":0.0002676131,"about_ca_system_score_gemma":0.000102810045,"threshold_uncertainty_score":0.82036746},"labels":[],"label_agreement":null},{"id":"W2147627663","doi":"10.3201/eid1505.081114","title":"Use of Unstructured Event-Based Reports for Global Infectious Disease Surveillance","year":2009,"lang":"en","type":"review","venue":"Emerging infectious diseases","topic":"Data-Driven Disease Surveillance","field":"Medicine","cited_by":203,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Public Health Agency of Canada; University Health Network","funders":"U.S. National Library of Medicine","keywords":"Public health; Public health surveillance; Disease surveillance; Infectious disease (medical specialty); Context (archaeology); Outbreak; The Internet; Event monitoring; Computer science; Information Dissemination; International Health Regulations; Event (particle physics); Psychological intervention; Unstructured data; Data science; Medicine; Process (computing); Disease; Data mining; World Wide Web; Big data; Geography; Pathology","score_opus":0.027458261205098925,"score_gpt":0.34122541627120007,"score_spread":0.31376715506610114,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2147627663","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00081948104,0.98068464,0.0014353577,0.000042033498,0.0015762631,0.0045975926,0.009498576,0.0012052235,0.00014081872],"genre_scores_gemma":[0.037051257,0.9461076,0.0002087819,0.00038982264,0.0008781781,0.00086661254,0.014048414,0.000288297,0.00016098037],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9942719,0.0004311849,0.0020504596,0.0015200296,0.00084242213,0.0008840498],"domain_scores_gemma":[0.99337494,0.00056321424,0.0020415343,0.0021797528,0.0006851093,0.0011554568],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00028633128,0.0012514694,0.00394382,0.00048493047,0.00023105384,0.00011473686,0.00025841978,0.00034776906,0.00011398874],"category_scores_gemma":[0.003928171,0.0011497135,0.0029009902,0.0013244024,0.000258933,0.0002463016,0.000112484166,0.00033840974,0.000013472072],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00042688785,0.0016778469,0.17218919,0.05487236,0.0015797722,0.0009850392,0.000005282983,0.0013000246,5.927314e-7,0.00015566152,0.012833809,0.75397354],"study_design_scores_gemma":[0.0015605757,0.00038567494,0.0342127,0.0113004,0.005678212,0.0002564747,0.0000013334966,0.00020417785,6.2058547e-7,0.00042028274,0.9447522,0.001227305],"about_ca_topic_score_codex":0.00008945701,"about_ca_topic_score_gemma":0.00007723389,"teacher_disagreement_score":0.93191844,"about_ca_system_score_codex":0.00077069155,"about_ca_system_score_gemma":0.0029294358,"threshold_uncertainty_score":0.99909526},"labels":[],"label_agreement":null},{"id":"W2148741539","doi":"10.3201/eid1802.111008","title":"Lack of Decline in Childhood Malaria, Malawi, 2001–2010","year":2012,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Malaria Research and Control","field":"Medicine","cited_by":63,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"National Institute of Allergy and Infectious Diseases; Wellcome Trust","keywords":"Malaria; Parasitemia; Cerebral Malaria; Medicine; Plasmodium falciparum; Transmission (telecommunications); Environmental health; Pediatrics; Immunology","score_opus":0.02120888069434543,"score_gpt":0.3161010049704674,"score_spread":0.29489212427612194,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2148741539","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98156655,0.002678621,0.00017963287,0.0041576168,0.00043369972,0.0006521124,0.000037774687,0.00013293927,0.010161034],"genre_scores_gemma":[0.9976942,0.00015510661,0.00006500691,0.0006303895,0.0005127238,0.000060991835,0.000036559028,0.000028837396,0.0008161915],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9983897,0.00008903169,0.00034149626,0.00019158851,0.00035813038,0.0006300146],"domain_scores_gemma":[0.9989311,0.00010192545,0.0000890088,0.00033054428,0.000096088625,0.00045132946],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00031446817,0.00016489856,0.0003790354,0.00028985838,0.000052322626,0.000012727141,0.00009262644,0.00007838868,0.002201753],"category_scores_gemma":[0.0007758497,0.00014785599,0.00015931223,0.0003747909,0.00006684305,0.00016650907,0.000086965745,0.0002461265,0.00009321924],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00018217727,0.0018577107,0.98926115,0.000119008626,0.00010213043,0.000021219053,0.000097114746,0.000029610068,0.0005980962,0.0020163993,0.003075189,0.002640191],"study_design_scores_gemma":[0.0033513347,0.00021087543,0.9919118,0.000090784684,0.000115141826,0.000030457963,0.00004381947,0.00018790257,0.00022169495,0.00026355556,0.003434181,0.00013842755],"about_ca_topic_score_codex":0.0004773137,"about_ca_topic_score_gemma":0.00010406734,"teacher_disagreement_score":0.016127625,"about_ca_system_score_codex":0.000059745977,"about_ca_system_score_gemma":0.00015205707,"threshold_uncertainty_score":0.9987104},"labels":[],"label_agreement":null},{"id":"W2150472220","doi":"10.3201/eid1002.030677","title":"Susceptibility of Pigs and Chickens to SARS Coronavirus","year":2004,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"SARS-CoV-2 and COVID-19 Research","field":"Medicine","cited_by":86,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canadian Science Centre for Human and Animal Health","funders":"Canadian Food Inspection Agency","keywords":"Virology; Outbreak; Virus; Coronavirus; Biology; Inoculation; Antibody; Viral shedding; Polymerase chain reaction; Isolation (microbiology); Nidovirales; Coronavirus disease 2019 (COVID-19); Medicine; Immunology; Microbiology; Gene; Infectious disease (medical specialty); Disease; Pathology","score_opus":0.029440932081248494,"score_gpt":0.355173894756047,"score_spread":0.3257329626747985,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2150472220","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9971246,0.0005556656,0.00013572483,0.00019213486,0.000109223685,0.00038708563,0.00002883222,0.00013742028,0.0013293293],"genre_scores_gemma":[0.99304634,0.0000119687975,0.000038675484,0.0067406483,0.000098770106,0.000026839443,0.0000037296836,0.000022050146,0.000010998179],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9988353,0.000031160493,0.00021753875,0.00032107678,0.00030807228,0.00028681612],"domain_scores_gemma":[0.99932086,0.000060026152,0.000043399312,0.00033011092,0.00012867848,0.00011693026],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00011633325,0.00014722126,0.00027460963,0.00018193542,0.000098299075,0.000016919732,0.000065978886,0.000049332924,0.000029760107],"category_scores_gemma":[0.00028370312,0.0001360088,0.00010494173,0.00033675015,0.00015247327,0.00006767884,0.00008666004,0.0001279263,0.000041185373],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002441444,0.00048830855,0.97082686,0.00020475718,0.00006456773,0.00003491343,0.00036850473,0.000013632226,0.022455666,0.00021710912,0.00011093352,0.0049705966],"study_design_scores_gemma":[0.0024421215,0.00084423146,0.96787876,0.00014403234,0.00012510351,0.000040756622,0.00012016231,0.000018702036,0.018818114,0.0015268073,0.00782734,0.00021388166],"about_ca_topic_score_codex":0.0013486951,"about_ca_topic_score_gemma":0.0004916933,"teacher_disagreement_score":0.007716406,"about_ca_system_score_codex":0.0001323617,"about_ca_system_score_gemma":0.00023071669,"threshold_uncertainty_score":0.55462784},"labels":[],"label_agreement":null},{"id":"W2154000976","doi":"10.3201/eid1107.050050","title":"Human Metapneumovirus Genetic Variability, South Africa","year":2005,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Respiratory viral infections research","field":"Medicine","cited_by":77,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"","keywords":"Human metapneumovirus; Metapneumovirus; Genetic diversity; Biology; Genetic variation; Virology; Genotype; Genetic variability; Gene; Molecular epidemiology; Genetics; Respiratory tract infections; Medicine; Respiratory system; Population","score_opus":0.03220510053943106,"score_gpt":0.3402284266151168,"score_spread":0.3080233260756858,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2154000976","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9616553,0.00071310473,0.0006054214,0.0002465698,0.00017011487,0.00060362776,0.000021114913,0.00073491596,0.035249833],"genre_scores_gemma":[0.9968142,0.000012174702,0.00015289051,0.0003540767,0.0007656496,0.0001612888,0.000009507421,0.000060920665,0.0016693295],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99772936,0.00024081973,0.00043431576,0.0005217279,0.0005227227,0.0005510406],"domain_scores_gemma":[0.9984527,0.00007827886,0.000092374095,0.00072344166,0.00020381025,0.00044936713],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0002821539,0.00026802864,0.00037216593,0.0004570697,0.00046900767,0.00008999447,0.00013901101,0.00009391307,0.002415112],"category_scores_gemma":[0.00055642513,0.00024905786,0.00027421405,0.0006880688,0.00018127731,0.000187495,0.00012680404,0.0003360913,0.0007769603],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000057291658,0.0018911215,0.958179,0.00022274116,0.00044504777,0.000093408395,0.00066211115,0.001977917,0.012248942,0.0010101493,0.005229206,0.017983062],"study_design_scores_gemma":[0.0031706942,0.0011644172,0.86314183,0.00008455728,0.0009044558,0.00012237292,0.000100854995,0.0013497613,0.0020197998,0.0015453039,0.12556267,0.00083327515],"about_ca_topic_score_codex":0.000052624695,"about_ca_topic_score_gemma":0.0000186106,"teacher_disagreement_score":0.12033347,"about_ca_system_score_codex":0.00028904018,"about_ca_system_score_gemma":0.00016978294,"threshold_uncertainty_score":0.9999962},"labels":[],"label_agreement":null},{"id":"W2154726954","doi":"10.3201/eid1405.070437","title":"Spread of<i>Streptococcus suis</i>Sequence Type 7, China","year":2008,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Streptococcal Infections and Treatments","field":"Medicine","cited_by":76,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal","funders":"","keywords":"Streptococcus suis; Tetracycline; Biology; Outbreak; Transposable element; Microbiology; Sequence (biology); Sequence analysis; Streptococcus; Genetics; Transmission (telecommunications); Virology; Gene; Virulence; Bacteria; Genome; Antibiotics","score_opus":0.02455331443310896,"score_gpt":0.30439951900966633,"score_spread":0.27984620457655734,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2154726954","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9856703,0.00057858235,0.000069089765,0.00006327664,0.00039564332,0.00047126037,0.000032294512,0.0003086054,0.012410936],"genre_scores_gemma":[0.9985384,0.00027574823,0.0000502094,0.000060917195,0.00015535105,0.00007087816,0.000054622968,0.000028937755,0.0007649766],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9989183,0.000031772797,0.00027781937,0.0002934522,0.00021252788,0.00026611387],"domain_scores_gemma":[0.99907446,0.000049635935,0.0001153846,0.00038682515,0.00015814115,0.00021554313],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00002887907,0.00020677526,0.00033672058,0.000178062,0.00021380451,0.000007909928,0.000054932632,0.000060944916,0.0008241109],"category_scores_gemma":[0.00018948287,0.00017919965,0.00021539947,0.0005387632,0.00017981652,0.000107308166,0.000036498088,0.00011823425,0.00012100566],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00004904243,0.00077592407,0.9936234,0.000056974175,0.00019709552,0.00013433736,0.000083548184,0.00007395545,0.0012680675,0.00016439288,0.0014099616,0.0021633054],"study_design_scores_gemma":[0.0013923026,0.000638455,0.99123234,0.00010853755,0.00027223505,0.00025454478,0.00001436617,0.00006646876,0.0030741466,0.00020836228,0.0025537014,0.0001845374],"about_ca_topic_score_codex":0.00056367705,"about_ca_topic_score_gemma":0.000010558794,"teacher_disagreement_score":0.012868048,"about_ca_system_score_codex":0.00008437039,"about_ca_system_score_gemma":0.00016211142,"threshold_uncertainty_score":0.90234363},"labels":[],"label_agreement":null},{"id":"W2154790599","doi":"10.3201/eid1608.100317","title":"Lethal Necrotizing Pneumonia Caused by an ST398<i>Staphylococcus aureus</i>Strain","year":2010,"lang":"en","type":"letter","venue":"Emerging infectious diseases","topic":"Antimicrobial Resistance in Staphylococcus","field":"Medicine","cited_by":80,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Medicine; Pneumonia; Staphylococcus aureus; Methicillin-resistant Staphylococcus aureus; Leukocidin; Bacteremia; Chest radiograph; Bronchoalveolar lavage; Microbiology; Internal medicine; Lung; Antibiotics; Biology","score_opus":0.010310176527031697,"score_gpt":0.2690391059958502,"score_spread":0.2587289294688185,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2154790599","genre_codex":"empirical","genre_gemma":"commentary","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.665265,0.0040202476,0.0009973907,0.29382208,0.0074898894,0.0056529525,0.009835592,0.005125162,0.007791684],"genre_scores_gemma":[0.40474623,0.00028319535,0.00023157953,0.5596642,0.017625717,0.00055796624,0.009512172,0.0012418027,0.0061371643],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9937054,0.000316315,0.0010851519,0.001838705,0.0012256177,0.0018288037],"domain_scores_gemma":[0.99576944,0.00032330042,0.0007281987,0.001948336,0.0004493298,0.00078136957],"candidate_categories":["metaepi_narrow","research_integrity","insufficient_payload"],"consensus_categories":["metaepi_narrow","research_integrity"],"category_scores_codex":[0.00026216495,0.0014812136,0.0017028961,0.000704687,0.00069182774,0.0003494537,0.0005365484,0.0025640363,0.0010878128],"category_scores_gemma":[0.00054709846,0.0015285414,0.00092499016,0.0006752676,0.0006547269,0.00038322178,0.00018423982,0.007756025,0.0002096072],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007124304,0.00045430483,0.014337624,0.00083411916,0.00043881036,0.0036951972,0.00015934075,0.000018185534,0.1149731,0.000007881407,0.863744,0.0012661698],"study_design_scores_gemma":[0.0021318863,0.0005417152,0.0074018217,0.0006932708,0.0014100166,0.00014687744,0.000067807276,0.000049976083,0.0017669246,0.00016862576,0.98369575,0.0019253361],"about_ca_topic_score_codex":0.0005364299,"about_ca_topic_score_gemma":0.00020677691,"teacher_disagreement_score":0.26584208,"about_ca_system_score_codex":0.00045958904,"about_ca_system_score_gemma":0.0008388692,"threshold_uncertainty_score":0.9998253},"labels":[],"label_agreement":null},{"id":"W2154824502","doi":"10.3201/eid1610.100108","title":"Chemokine Receptor 5 Δ32 Allele in Patients with Severe Pandemic (H1N1) 2009","year":2010,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Immune Cell Function and Interaction","field":"Immunology and Microbiology","cited_by":49,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba; Public Health Agency of Canada","funders":"","keywords":"Allele; Loss of heterozygosity; Chemokine receptor CCR5; Pandemic; Chemokine receptor; Immunology; Population; Biology; Medicine; Chemokine; Disease; Immune system; Genetics; Internal medicine; Coronavirus disease 2019 (COVID-19); Gene; Infectious disease (medical specialty); Environmental health","score_opus":0.0031397895552845107,"score_gpt":0.20080754141966903,"score_spread":0.1976677518643845,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2154824502","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99268043,0.00020922652,0.000018749823,0.00005928344,0.0031005281,0.00021232557,0.000014004882,0.0002285613,0.0034769173],"genre_scores_gemma":[0.99457973,0.000026778642,0.0000058432574,0.0001997411,0.000054874086,0.0000338186,0.00052446534,0.000024550181,0.004550205],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9991086,0.00006332332,0.00022153118,0.00027087794,0.00004445729,0.0002911853],"domain_scores_gemma":[0.9994904,0.000044969547,0.000108499786,0.00022759834,0.000097290875,0.000031248193],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.000062676714,0.00018527167,0.00019203873,0.0001643875,0.00016216314,0.000018170665,0.000090802394,0.00014681202,0.007202508],"category_scores_gemma":[0.00010562079,0.00015863885,0.00006665511,0.0001824744,0.00007087792,0.0002068483,0.00003401129,0.00047496025,0.00074423105],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00034958366,0.0005504223,0.9544852,0.000011202204,0.00007831592,6.434828e-7,0.00009505487,0.000025294981,0.012954665,0.000029807768,0.02771601,0.0037038408],"study_design_scores_gemma":[0.004058184,0.00031135842,0.77068657,0.000031043797,0.000044172197,0.000016999977,0.000056643432,0.000004494202,0.0017762854,0.000020252894,0.22267006,0.00032390316],"about_ca_topic_score_codex":0.00021933958,"about_ca_topic_score_gemma":0.00026661312,"teacher_disagreement_score":0.19495405,"about_ca_system_score_codex":0.0000531336,"about_ca_system_score_gemma":0.000040575072,"threshold_uncertainty_score":0.99370503},"labels":[],"label_agreement":null},{"id":"W2155210993","doi":"10.3201/eid1802.110987","title":"Diphtheria in the Postepidemic Period, Europe, 2000–2009","year":2012,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Diphtheria, Corynebacterium, and Tetanus","field":"Biochemistry, Genetics and Molecular Biology","cited_by":168,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Diphtheria; Period (music); Virology; Medicine; Biology; Vaccination","score_opus":0.007295524027756643,"score_gpt":0.24600088618482702,"score_spread":0.23870536215707036,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2155210993","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9826414,0.005048648,0.000055695702,0.0001543178,0.00060274807,0.00019957038,0.00003663602,0.000049297447,0.011211686],"genre_scores_gemma":[0.9973231,0.00023035255,0.000010929651,0.00091421045,0.00080809236,0.000050714294,0.00008711806,0.000038784005,0.0005367119],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99868226,0.0002467302,0.00022088872,0.00025632192,0.0001343952,0.00045938868],"domain_scores_gemma":[0.99929106,0.000024215118,0.00008103477,0.0004352736,0.00004991111,0.00011850599],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000253566,0.00021297821,0.0001589637,0.000055332825,0.00013374253,0.000053317523,0.00024121646,0.00007292225,0.00016156014],"category_scores_gemma":[0.00023294796,0.00016437993,0.00011511442,0.00022800958,0.00007415611,0.000017481629,0.000076799806,0.00010700447,0.00008310906],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013499953,0.00087323104,0.9173073,0.000048721195,0.0001238048,0.00002756583,0.0012534753,0.000079821555,0.060836267,0.00027344155,0.009681492,0.009359877],"study_design_scores_gemma":[0.00092263875,0.00028941597,0.60118914,0.00003053595,0.0000954446,0.00016355004,0.0003652676,0.000015931775,0.0013881908,0.0000775768,0.3948894,0.0005728726],"about_ca_topic_score_codex":0.000069524394,"about_ca_topic_score_gemma":0.00003695343,"teacher_disagreement_score":0.38520792,"about_ca_system_score_codex":0.000019821242,"about_ca_system_score_gemma":0.000068315385,"threshold_uncertainty_score":0.67032194},"labels":[],"label_agreement":null},{"id":"W2155613296","doi":"10.3201/eid1808.111268","title":"Outbreak of Extended-Spectrum β-Lactamase–producing<i>Klebsiella oxytoca</i>Infections Associated with Contaminated Handwashing Sinks1","year":2012,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Antibiotic Resistance in Bacteria","field":"Biochemistry, Genetics and Molecular Biology","cited_by":178,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of Toronto","funders":"","keywords":"Klebsiella oxytoca; Outbreak; Microbiology; Klebsiella pneumoniae; Klebsiella; Medicine; Beta-lactamase; Virology; Biology; Escherichia coli","score_opus":0.005451914888757112,"score_gpt":0.23078161127686708,"score_spread":0.22532969638810996,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2155613296","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9944435,0.0010152983,0.0012872391,0.000051077717,0.00043060613,0.0002997614,0.000074057876,0.00013333438,0.0022651232],"genre_scores_gemma":[0.99860805,0.00012095041,0.00003734528,0.00008308864,0.0003070368,0.000021781001,0.00023584192,0.00006774052,0.0005181358],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9982504,0.00014954468,0.00036101713,0.00043405753,0.00022539122,0.0005795399],"domain_scores_gemma":[0.9987159,0.00006703742,0.00033518884,0.0005139649,0.00016346885,0.00020445994],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0002206346,0.00031633154,0.0003407336,0.00011730504,0.00025591222,0.0000472616,0.00014805088,0.00015388716,0.00009096942],"category_scores_gemma":[0.00056702236,0.0002922476,0.0001623398,0.00031482716,0.0002045476,0.000033533608,0.00009232823,0.00014562593,0.0000101891965],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011537233,0.0010054894,0.93579286,0.000061231374,0.00041970334,0.00000481396,0.00013948712,0.00015231053,0.06027156,0.00013480989,0.0015973995,0.00030496586],"study_design_scores_gemma":[0.001501279,0.00079769595,0.9315208,0.00022986412,0.00038088774,0.000044167937,0.00022295263,0.000028396447,0.061248463,0.000054397457,0.0033029222,0.00066817546],"about_ca_topic_score_codex":0.00014173458,"about_ca_topic_score_gemma":0.0003347141,"teacher_disagreement_score":0.004272056,"about_ca_system_score_codex":0.00007945797,"about_ca_system_score_gemma":0.00012704985,"threshold_uncertainty_score":0.999953},"labels":[],"label_agreement":null},{"id":"W2156545903","doi":"10.3201/eid1801.101485","title":"Use of Lean Response to Improve Pandemic Influenza Surge in Public Health Laboratories","year":2012,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Influenza Virus Research Studies","field":"Medicine","cited_by":19,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Public Health Agency of Canada; Provincial Health Services Authority; University of British Columbia","funders":"University of British Columbia; Provincial Health Services Authority","keywords":"Pandemic; Public health; Multidisciplinary approach; Influenza pandemic; Coronavirus disease 2019 (COVID-19); Surge Capacity; Pandemic influenza; Medicine; Medical emergency; Environmental health; Business; Political science; Nursing; Infectious disease (medical specialty); Pathology; Disease","score_opus":0.12714369814563112,"score_gpt":0.40682718386119743,"score_spread":0.27968348571556634,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2156545903","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9948232,0.0029625497,0.000022066135,0.00077931624,0.0002854019,0.00068906724,0.0001420085,0.00021054618,0.00008583002],"genre_scores_gemma":[0.99674183,0.00023416996,0.00005403853,0.002505,0.00017484835,0.00013542434,0.000009309727,0.000042692085,0.000102659025],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99731517,0.00035741387,0.00056813186,0.00028148058,0.0004997994,0.000977988],"domain_scores_gemma":[0.9975905,0.0006416235,0.00015980368,0.0004561043,0.0004053224,0.0007466531],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.0013164069,0.00023655008,0.0005644429,0.0007923492,0.00016770467,0.0000350246,0.00008530627,0.00006481193,0.00007787587],"category_scores_gemma":[0.010392835,0.00021656863,0.000107708,0.0013722277,0.00015062143,0.0005585693,0.00017683531,0.00025954223,0.000034055945],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0009724108,0.0005183708,0.9875084,0.0002287955,0.00010004403,0.000006918344,0.0023192726,0.000030796353,0.0026596512,0.00019039637,0.002077618,0.0033872917],"study_design_scores_gemma":[0.0011899763,0.0004532015,0.89790225,0.00013893176,0.000025417881,0.000004572602,0.00039305483,0.000008065497,0.0003806196,0.000020485566,0.09928406,0.0001993674],"about_ca_topic_score_codex":0.0010931737,"about_ca_topic_score_gemma":0.00021418561,"teacher_disagreement_score":0.09720644,"about_ca_system_score_codex":0.0005319018,"about_ca_system_score_gemma":0.00082470494,"threshold_uncertainty_score":0.99794304},"labels":[],"label_agreement":null},{"id":"W2156744090","doi":"10.3201/eid2001.130858","title":"Molecular Barriers to Zoonotic Transmission of Prions","year":2013,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Prion Diseases and Protein Misfolding","field":"Biochemistry, Genetics and Molecular Biology","cited_by":61,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canadian Food Inspection Agency","funders":"Biotechnology and Biological Sciences Research Council; Medical Research Council; University of Edinburgh","keywords":"Chronic wasting disease; Scrapie; Bovine spongiform encephalopathy; Virology; Disease; Prion protein; Pathogenesis; Biology; Gene isoform; Medicine; Immunology; Gene; Pathology; Genetics","score_opus":0.003492787910843084,"score_gpt":0.2320413057376646,"score_spread":0.2285485178268215,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2156744090","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9861284,0.003379879,0.009229432,0.00025271735,0.00009361108,0.00040521714,0.000018246774,0.00004280611,0.00044969743],"genre_scores_gemma":[0.9988205,0.00021847221,0.00021454005,0.00047910874,0.000060204606,0.000100300356,0.000029934637,0.000025815742,0.000051127685],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99912435,0.000052822743,0.00019125828,0.0002702388,0.00013072824,0.00023061837],"domain_scores_gemma":[0.99904186,0.00000889409,0.000055316206,0.00028582668,0.00009003317,0.00051807234],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00004052075,0.00014541514,0.00013339538,0.000081037346,0.00011421383,0.000023789367,0.00013837776,0.00005772836,0.00061361346],"category_scores_gemma":[0.00021844175,0.00014384856,0.00017095436,0.00015573652,0.000037393147,0.000007290654,0.00006808521,0.000042518208,0.000027439044],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00004480377,0.00013385614,0.03558904,0.000108243454,0.00013068088,0.000004060889,0.00009838361,0.0061591063,0.892327,0.00018577478,0.0035446642,0.06167438],"study_design_scores_gemma":[0.0029193878,0.0017353047,0.08132071,0.00040805037,0.0004807171,0.0000228526,0.0005031237,0.0016193935,0.7840776,0.003098023,0.12181673,0.001998139],"about_ca_topic_score_codex":0.00007657091,"about_ca_topic_score_gemma":0.0000022848646,"teacher_disagreement_score":0.11827207,"about_ca_system_score_codex":0.000012175822,"about_ca_system_score_gemma":0.000105770734,"threshold_uncertainty_score":0.6718637},"labels":[],"label_agreement":null},{"id":"W2156863113","doi":"10.3201/eid1910.131092","title":"Think Fungus—Prevention and Control of Fungal Infections","year":2013,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Fungal Infections and Studies","field":"Medicine","cited_by":51,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Incidence (geometry); Medicine; Disease; Epidemiology; Intensive care medicine","score_opus":0.007255103490731332,"score_gpt":0.26006679865787136,"score_spread":0.25281169516714,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2156863113","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9887339,0.00222772,0.0017399242,0.000363005,0.00034326618,0.0005392785,0.00001665054,0.00023683222,0.0057994346],"genre_scores_gemma":[0.9986856,0.00029005157,0.000029611288,0.00015290365,0.0001664272,0.00008464007,0.000007707034,0.00001810264,0.0005649388],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9991508,0.00004967675,0.00026604065,0.00019975482,0.00013998992,0.00019374564],"domain_scores_gemma":[0.99924004,0.00011244164,0.000098301905,0.00018062905,0.00022848544,0.00014008529],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0000660941,0.00015435697,0.00031253387,0.00020144357,0.00025661892,0.000027231623,0.00002224361,0.000054311844,0.0005240557],"category_scores_gemma":[0.000226827,0.00013359435,0.00016135487,0.00024377625,0.00011995607,0.00018592531,0.00003186507,0.0001265017,0.000042811],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000021496415,0.0006655173,0.988177,0.00016824418,0.0003716041,0.0000036313284,0.00021043504,0.000059447582,0.0021785866,0.00085076474,0.0020492196,0.0052440693],"study_design_scores_gemma":[0.0019994734,0.00095440255,0.9922055,0.00012277008,0.0005690293,0.00009786074,0.00027774708,0.00059332175,0.0001922666,0.0016867969,0.0011158268,0.00018501766],"about_ca_topic_score_codex":0.00041811707,"about_ca_topic_score_gemma":0.0000344317,"teacher_disagreement_score":0.009951728,"about_ca_system_score_codex":0.000038071623,"about_ca_system_score_gemma":0.000046455167,"threshold_uncertainty_score":0.57380426},"labels":[],"label_agreement":null},{"id":"W2156920613","doi":"10.3201/eid1411.080532","title":"Tourism and Specific Risk Areas for<i>Cryptococcus gattii</i>, Vancouver Island, Canada","year":2008,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Fungal Infections and Studies","field":"Medicine","cited_by":24,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"BC Centre for Disease Control; University of British Columbia","funders":"University of British Columbia","keywords":"Cryptococcus gattii; Tourism; Geography; Residence; Destinations; Socioeconomics; Cryptococcus; Environmental protection; Environmental health; Demography; Biology; Medicine; Archaeology; Microbiology","score_opus":0.008387340600633472,"score_gpt":0.22413260144432653,"score_spread":0.21574526084369305,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2156920613","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9859087,0.004079251,0.00095161825,0.00019361301,0.0015363744,0.0006643913,0.00022653939,0.00018499457,0.0062545147],"genre_scores_gemma":[0.9957643,0.0016460445,0.000062938045,0.00029530772,0.0006304179,0.00014261124,0.000018355653,0.000031724074,0.0014082934],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99893516,0.000027051452,0.0002212078,0.0003129274,0.00018908182,0.00031459634],"domain_scores_gemma":[0.9991565,0.00017010917,0.00008618399,0.00021896268,0.00014741177,0.00022087188],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000044819848,0.00021634936,0.0003297833,0.00010408175,0.0007916455,0.00001569141,0.00003142511,0.00004419334,0.0001448194],"category_scores_gemma":[0.00016476595,0.0001879042,0.00012468036,0.00018371391,0.00010223047,0.00007046375,0.000034766854,0.00014818125,0.0000052571995],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00005526234,0.00011422333,0.5979014,0.00005506423,0.00014534265,0.00006986701,0.000092894705,0.000059145168,0.000020997251,0.000035203215,0.40022197,0.0012286492],"study_design_scores_gemma":[0.002897917,0.0003659795,0.59056705,0.00007534407,0.0003398734,0.00015367212,0.00021557166,0.00019356479,0.000106161984,0.0003936022,0.40428546,0.0004058062],"about_ca_topic_score_codex":0.07826151,"about_ca_topic_score_gemma":0.29609603,"teacher_disagreement_score":0.21783453,"about_ca_system_score_codex":0.00014745534,"about_ca_system_score_gemma":0.00022276031,"threshold_uncertainty_score":0.9278764},"labels":[],"label_agreement":null},{"id":"W2161004182","doi":"10.3201/eid1508.081384","title":"Spread of <i>Cryptococcus gattii</i> into Pacific Northwest Region of the United States","year":2009,"lang":"en","type":"review","venue":"Emerging infectious diseases","topic":"Fungal Infections and Studies","field":"Medicine","cited_by":270,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Cryptococcus gattii; Cryptococcosis; Cryptococcus; Incidence (geometry); Disease; Outbreak; Geography; Biology; Medicine; Virology; Immunology; Pathology","score_opus":0.021043915688621483,"score_gpt":0.307033941612888,"score_spread":0.28599002592426653,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2161004182","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0027844638,0.9937128,0.000025433019,0.00008087942,0.00051845337,0.001251147,0.0001236921,0.00014428068,0.0013588632],"genre_scores_gemma":[0.012515411,0.98655504,0.000008265131,0.00005745741,0.0001756113,0.00012101763,0.00030650652,0.000053806943,0.00020687639],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99801666,0.00019325384,0.0008576103,0.00035599878,0.00030486254,0.00027161374],"domain_scores_gemma":[0.9977556,0.00027063987,0.00075845653,0.00073595694,0.0003555032,0.00012385126],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00008979054,0.00047387223,0.0017402697,0.0005320391,0.00024702345,0.000014808525,0.00015485774,0.0001603768,0.000030717216],"category_scores_gemma":[0.00026427925,0.00030063614,0.0010813202,0.0016251729,0.00030733296,0.00005011351,0.00009973398,0.00035068954,0.000008526097],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008347059,0.0029010128,0.11454078,0.08197598,0.0031767755,0.00008309985,0.0008988535,0.00028117976,0.000004766899,0.0005741427,0.021902446,0.7735775],"study_design_scores_gemma":[0.00044268914,0.00044332835,0.0033612894,0.018895444,0.0041669616,0.00009113461,0.00011785236,0.000008903005,0.000006043307,0.00018279986,0.9719559,0.0003276736],"about_ca_topic_score_codex":0.0014302377,"about_ca_topic_score_gemma":0.00014283553,"teacher_disagreement_score":0.95005345,"about_ca_system_score_codex":0.00014433153,"about_ca_system_score_gemma":0.0002536422,"threshold_uncertainty_score":0.99994457},"labels":[],"label_agreement":null},{"id":"W2162882627","doi":"10.3201/eid1603.090746","title":"Parvovirus 4–like Virus in Blood Products","year":2010,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Parvovirus B19 Infection Studies","field":"Medicine","cited_by":36,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institut National de la Recherche Scientifique","funders":"","keywords":"Parvovirus; Virology; Parvoviridae; Biology; Virus; Torque teno virus; Porcine parvovirus; Human virome; Microbiology; Genome; Polymerase chain reaction; Genetics; Gene","score_opus":0.011400518580939897,"score_gpt":0.28295742367371524,"score_spread":0.27155690509277536,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2162882627","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9834551,0.000782128,0.000018876532,0.00039999612,0.0018357539,0.0005175706,0.00002166388,0.00068746466,0.012281418],"genre_scores_gemma":[0.9972489,0.00029627682,0.00008553843,0.00069589,0.00070546556,0.00019653958,0.000019029352,0.000056261786,0.00069613464],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9981332,0.00005904898,0.00040710458,0.00054247776,0.00034615226,0.000512031],"domain_scores_gemma":[0.998796,0.000103064034,0.00012165577,0.0005442529,0.0001905078,0.0002445538],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00018170952,0.00031404954,0.0004586731,0.00047704845,0.00022392502,0.000039982035,0.00009044425,0.000109524255,0.0006954288],"category_scores_gemma":[0.0010080074,0.0002989248,0.00014888261,0.00088524463,0.00018030239,0.00020491493,0.00009329524,0.0005591435,0.0010541008],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007588517,0.0014506493,0.9286212,0.000120112,0.00018407364,0.00016494295,0.00019502109,0.000030058114,0.05984676,0.00020392737,0.0069511277,0.0021562697],"study_design_scores_gemma":[0.0038864592,0.00015275367,0.87573564,0.00008480609,0.00055919366,0.00034506508,0.0000595209,0.00004004189,0.020254433,0.00026895513,0.09802786,0.0005852784],"about_ca_topic_score_codex":0.0007136209,"about_ca_topic_score_gemma":0.00073669135,"teacher_disagreement_score":0.09107674,"about_ca_system_score_codex":0.000062435436,"about_ca_system_score_gemma":0.00018679284,"threshold_uncertainty_score":0.9999463},"labels":[],"label_agreement":null},{"id":"W2162976444","doi":"10.3201/eid1905.121852","title":"Genetic Analysis of Primaquine Tolerance in a Patient with Relapsing Vivax Malaria","year":2013,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Malaria Research and Control","field":"Medicine","cited_by":27,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institute of General Medical Sciences; University of California, San Diego; National Institutes of Health; Mahidol University; Wellcome Trust; National Institute of Allergy and Infectious Diseases; Alberta Health Services; Eli Lilly and Company","keywords":"Primaquine; Malaria; Plasmodium vivax; Drug resistance; Biology; Virology; Medicine; Immunology; Genetics; Plasmodium falciparum; Chloroquine","score_opus":0.004157773628035906,"score_gpt":0.2341398962779241,"score_spread":0.22998212264988818,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2162976444","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99580574,0.0008050889,0.00083551847,0.0005109286,0.000035637862,0.00058908196,0.000008205782,0.0000523962,0.0013574192],"genre_scores_gemma":[0.9993038,0.000044482116,0.000197908,0.0001550117,0.000036790618,0.00015699999,0.000014743105,0.00001679592,0.00007347321],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9987488,0.00006832376,0.0002966421,0.00024779484,0.00033580125,0.00030268566],"domain_scores_gemma":[0.9991674,0.00006183023,0.00010095967,0.00030498838,0.00017601888,0.0001888179],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.000051103365,0.00013536461,0.00041314348,0.000555616,0.000045614066,0.00002278768,0.000053890235,0.00003446077,0.0009790959],"category_scores_gemma":[0.00014962284,0.00010640156,0.00013336168,0.0011703207,0.000057925667,0.000091232905,0.000029368817,0.0001261968,0.00001174693],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00030534863,0.0006032212,0.97662723,0.00012356161,0.00089846476,0.00012922945,0.00023311973,0.008396293,0.0025130438,0.00014832268,0.00014512311,0.009877054],"study_design_scores_gemma":[0.0017096277,0.0005381516,0.9734925,0.0001401799,0.0008308301,0.000014829874,0.000057800957,0.02286781,0.00009659741,0.000060365728,0.000072229595,0.0001190827],"about_ca_topic_score_codex":0.0012815321,"about_ca_topic_score_gemma":0.00019006287,"teacher_disagreement_score":0.014471516,"about_ca_system_score_codex":0.00007377624,"about_ca_system_score_gemma":0.00010820387,"threshold_uncertainty_score":0.99993414},"labels":[],"label_agreement":null},{"id":"W2163229490","doi":"10.3201/eid1003.030702","title":"Clinical Trials and Novel Pathogens: Lessons Learned from SARS","year":2004,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"SARS-CoV-2 and COVID-19 Research","field":"Medicine","cited_by":36,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University Health Network; University of Toronto; Mount Sinai Hospital","funders":"","keywords":"Outbreak; Clinical trial; Ribavirin; Medicine; Intensive care medicine; Randomized controlled trial; Virology; Pathology; Virus","score_opus":0.19939245236255107,"score_gpt":0.47450946963384494,"score_spread":0.2751170172712939,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2163229490","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99214953,0.0020017507,0.0018326743,0.001918214,0.0004029445,0.00042960639,0.00013814431,0.00029000014,0.00083712506],"genre_scores_gemma":[0.98327625,0.00020682512,0.00012921059,0.015431222,0.00081952644,0.0000535544,0.000021792657,0.000044430897,0.00001721243],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9978005,0.00025474274,0.0006359518,0.0005610021,0.00037755337,0.0003702133],"domain_scores_gemma":[0.9982816,0.0008850884,0.00015136214,0.00040593403,0.0001133914,0.00016261764],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010294743,0.00021914495,0.00074045785,0.00018348957,0.00019161734,0.00007111833,0.00009236632,0.00014529537,0.000036977483],"category_scores_gemma":[0.0060784253,0.00018703302,0.00037141534,0.00027849415,0.00019629629,0.00009989043,0.000100947036,0.00033326517,0.0000857764],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006844288,0.0019366323,0.8329047,0.000110098845,0.00067652966,0.00023562164,0.00025258824,0.000016292079,0.05743441,0.00093966915,0.00075543224,0.10405358],"study_design_scores_gemma":[0.034180876,0.0014456566,0.7751723,0.0007429108,0.002164032,0.00010817893,0.00045767636,0.00042867204,0.012018444,0.022116786,0.15008989,0.0010745575],"about_ca_topic_score_codex":0.0008450273,"about_ca_topic_score_gemma":0.00007265256,"teacher_disagreement_score":0.14933446,"about_ca_system_score_codex":0.00009466379,"about_ca_system_score_gemma":0.00043215646,"threshold_uncertainty_score":0.76269853},"labels":[],"label_agreement":null},{"id":"W2164925583","doi":"10.3201/eid1804.110628","title":"Human Parvovirus 4 Infection, Cameroon","year":2012,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Parvovirus B19 Infection Studies","field":"Medicine","cited_by":20,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Sherbrooke","funders":"Canadian Institutes of Health Research; Wellcome Trust","keywords":"Seroprevalence; Parvovirus; Virology; Medicine; Immunology; Virus; Serology; Antibody","score_opus":0.02545627046955383,"score_gpt":0.335486794369064,"score_spread":0.31003052389951014,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2164925583","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.95024425,0.0018376334,0.00033279398,0.00014865682,0.0014124454,0.00038816457,0.000014349876,0.0013329479,0.044288743],"genre_scores_gemma":[0.9958379,0.00017248568,0.00002117872,0.00082598696,0.0015801486,0.00017667857,0.000029417954,0.000066492714,0.001289691],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99812126,0.00009754124,0.0003992819,0.0003196486,0.0003720286,0.00069022493],"domain_scores_gemma":[0.9986751,0.000060548307,0.00016382958,0.0004135582,0.0001813604,0.0005055921],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00018734735,0.00033843864,0.00045443635,0.00038581798,0.00070357986,0.00003821992,0.000049355138,0.000100932695,0.0012983597],"category_scores_gemma":[0.00031629813,0.00032276523,0.0002986557,0.00060249295,0.00016477884,0.00042069302,0.00008788341,0.000270326,0.0020644981],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00001885254,0.0007850234,0.96004057,0.00008841084,0.00028637517,0.0000077929335,0.00019846007,0.000034150755,0.0010562951,0.0007007105,0.034779113,0.00200425],"study_design_scores_gemma":[0.0011574724,0.0000970689,0.8684037,0.000051907366,0.0005023099,0.00014064802,0.000045290515,0.00000861751,0.00076342636,0.00013095236,0.12834404,0.00035458725],"about_ca_topic_score_codex":0.00065667304,"about_ca_topic_score_gemma":0.000052948897,"teacher_disagreement_score":0.093564935,"about_ca_system_score_codex":0.00026829576,"about_ca_system_score_gemma":0.000059165763,"threshold_uncertainty_score":0.99992245},"labels":[],"label_agreement":null},{"id":"W2167172824","doi":"10.3201/eid1412.080750","title":"Possible Emergence of West Caucasian Bat Virus in Africa","year":2008,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Rabies epidemiology and control","field":"Immunology and Microbiology","cited_by":64,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Centers for Disease Control and Prevention; National Research Foundation; University of Guelph","keywords":"Virology; Virus; Biology; Zoology; Geography","score_opus":0.01467968800466383,"score_gpt":0.24422219720670518,"score_spread":0.22954250920204136,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2167172824","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9791719,0.010619563,0.00010285378,0.00018206108,0.00089060783,0.00017190065,0.00004699044,0.00012991953,0.008684253],"genre_scores_gemma":[0.9980394,0.0006647244,0.000006700408,0.00010560462,0.000036821177,0.0000521306,0.000027564858,0.000014185323,0.0010528413],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99850243,0.00029794875,0.0004295874,0.0002933666,0.000032375036,0.0004442925],"domain_scores_gemma":[0.9992489,0.00022244622,0.0001538486,0.00028413086,0.00005167483,0.000038983853],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00014593186,0.00018409903,0.0004134819,0.0002107893,0.0002457117,0.0000020985856,0.00017540029,0.00016700386,0.002189429],"category_scores_gemma":[0.00038855113,0.00017417532,0.00015022822,0.00030616592,0.00035829912,0.00010798686,0.000053321306,0.00022592935,0.0002911807],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001337358,0.00049485447,0.9652392,0.000028194894,0.00016306869,0.000045419918,0.0009406293,0.00053261936,0.018754013,0.000841246,0.011688706,0.0011382776],"study_design_scores_gemma":[0.0024164151,0.0003496087,0.9765166,0.0000684012,0.000110091656,0.00018967755,0.00041172843,0.000052540654,0.004753302,0.0012542725,0.013400145,0.0004772151],"about_ca_topic_score_codex":0.0008549803,"about_ca_topic_score_gemma":0.00036480287,"teacher_disagreement_score":0.018867578,"about_ca_system_score_codex":0.000023560473,"about_ca_system_score_gemma":0.000089427114,"threshold_uncertainty_score":0.99872273},"labels":[],"label_agreement":null},{"id":"W2168141663","doi":"10.3201/eid1108.040877","title":"HIV-1 Genetic Diversity in Antenatal Cohort, Canada","year":2005,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"HIV Research and Treatment","field":"Immunology and Microbiology","cited_by":33,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"AIDS Vancouver; Jewish General Hospital; Institut National de Santé Publique du Québec; McGill University Health Centre; Université de Montréal; Centre Hospitalier Universitaire Sainte-Justine","funders":"Styrelsen för Internationellt Utvecklingssamarbete; Elizabeth Glaser Pediatric AIDS Foundation","keywords":"Clade; Genotyping; Phylogenetic tree; Cohort; Genetic diversity; Human immunodeficiency virus (HIV); Population; Medicine; Cohort study; Virology; Biology; Genotype; Genetics; Environmental health; Internal medicine; Gene","score_opus":0.0059918823436430025,"score_gpt":0.21967739576458736,"score_spread":0.21368551342094436,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2168141663","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99448544,0.002884075,0.000016345462,0.00024455236,0.0001945537,0.00016605563,0.00025576982,0.0000633076,0.0016899131],"genre_scores_gemma":[0.9984,0.00010928497,0.0000046179002,0.00011212159,0.000034063072,0.000021723275,0.00018897936,0.0000073421666,0.0011219188],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9991619,0.000081940736,0.000119780074,0.00021145129,0.000053244814,0.00037166005],"domain_scores_gemma":[0.99968797,0.000051253857,0.000027862898,0.00014934517,0.000025974206,0.000057576104],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.000033012526,0.00011454167,0.00014015049,0.00009192611,0.00029359205,0.000007794494,0.00010427993,0.000038780163,0.0011854672],"category_scores_gemma":[0.00004819812,0.00010701916,0.000045733104,0.00011575924,0.00006589491,0.000057622674,0.00015421587,0.00012206653,0.0005445471],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000025709407,0.00018822294,0.9784826,0.000006501204,0.00011718646,0.0001474652,0.000060831288,0.00021121997,0.00011436718,0.000011765303,0.016983097,0.0036510515],"study_design_scores_gemma":[0.0012590715,0.00003946463,0.9778937,0.0000104475275,0.000032906013,0.000040449813,0.000040489194,0.000013311407,0.00021597387,0.000012517263,0.020315489,0.00012619435],"about_ca_topic_score_codex":0.3038157,"about_ca_topic_score_gemma":0.51061344,"teacher_disagreement_score":0.20679778,"about_ca_system_score_codex":0.00029618395,"about_ca_system_score_gemma":0.00021394016,"threshold_uncertainty_score":0.9997276},"labels":[],"label_agreement":null},{"id":"W2168547182","doi":"10.3201/eid1804.111803","title":"Genomic Analysis of<i>emm59</i>Group A<i>Streptococcus</i>Invasive Strains, United States","year":2012,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Streptococcal Infections and Treatments","field":"Medicine","cited_by":29,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Canadian Institutes of Health Research; Centers for Disease Control and Prevention; Minnesota Department of Health","keywords":"Streptococcus; Biology; Streptococcus pneumoniae; Group A; Cluster (spacecraft); Streptococcus pyogenes; Genetics; Genotype; Microbiology; Medicine; Gene; Bacteria; Internal medicine","score_opus":0.01360056532577036,"score_gpt":0.28460470340116023,"score_spread":0.27100413807538987,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2168547182","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99578696,0.0010576909,0.00031722695,0.000047215522,0.0002526451,0.00057851657,0.0003271771,0.00028045432,0.0013521159],"genre_scores_gemma":[0.99700826,0.00041401264,0.00005154843,0.00026663626,0.00018003317,0.00016147968,0.0017568873,0.0000396398,0.00012152818],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99843466,0.00008241653,0.0004377173,0.00031251847,0.00023923014,0.00049343245],"domain_scores_gemma":[0.9985557,0.00017316805,0.00022053167,0.00045276064,0.00016264286,0.00043516155],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00008913262,0.000298713,0.0005902189,0.0011582542,0.00018686234,0.000023967264,0.000064717584,0.00007849565,0.0010555927],"category_scores_gemma":[0.0001277784,0.00026403664,0.0005846147,0.002185634,0.0001293411,0.00016919688,0.000053082047,0.00012933032,0.00005282889],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000030168745,0.0016749564,0.98729736,0.000077104036,0.0056471066,0.000011382398,0.00029545883,0.0012897581,0.0012438125,0.0002514614,0.00059857493,0.0015828672],"study_design_scores_gemma":[0.0013654963,0.00029235633,0.98435664,0.000055521352,0.008858664,0.000010210916,0.0003108176,0.00037339085,0.0005980731,0.00006192312,0.0034700374,0.0002468641],"about_ca_topic_score_codex":0.0007999105,"about_ca_topic_score_gemma":0.00009138424,"teacher_disagreement_score":0.003211557,"about_ca_system_score_codex":0.00017927971,"about_ca_system_score_gemma":0.00006785827,"threshold_uncertainty_score":0.99998116},"labels":[],"label_agreement":null},{"id":"W2168710934","doi":"10.3201/eid.1810.120119","title":"<i>Echinococcus multilocularis</i>in Urban Coyotes, Alberta, Canada","year":2012,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Parasitic infections in humans and animals","field":"Medicine","cited_by":87,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of Calgary","funders":"Natural Sciences and Engineering Research Council of Canada; Faculty of Veterinary Medicine, University of Calgary; University of Calgary","keywords":"Echinococcus multilocularis; Canis; Parasite hosting; Veterinary medicine; Vulpes; Biology; Zoology; Urbanization; Geography; Ecology; Echinococcosis; Predation; Medicine","score_opus":0.007902125337200727,"score_gpt":0.2630669590543673,"score_spread":0.25516483371716653,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2168710934","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9769326,0.001957078,0.00013271043,0.00014773037,0.0008888633,0.0003325285,0.00001756331,0.00012258434,0.019468352],"genre_scores_gemma":[0.99737126,0.000035072033,0.000038757164,0.000799326,0.0005688135,0.000064859676,0.00003348416,0.000034937097,0.0010534659],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.998583,0.000058875165,0.00030226557,0.00023653546,0.00023761325,0.00058168266],"domain_scores_gemma":[0.9991072,0.00013415363,0.00007042863,0.00029179972,0.000057848527,0.0003385933],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00010888782,0.00022379021,0.00031571073,0.0001679374,0.00020608486,0.00002037881,0.00005903857,0.00006376489,0.0005412843],"category_scores_gemma":[0.0002742739,0.00021372548,0.0001224343,0.00029182536,0.00005270586,0.00015130821,0.000031857053,0.00022596213,0.00005269023],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000017562554,0.00049004983,0.98906666,0.000070338785,0.00006201793,0.000034672776,0.00016326376,0.00006964138,0.00012534419,0.0007865403,0.008194526,0.00091936305],"study_design_scores_gemma":[0.0012172591,0.000070003385,0.9103386,0.00012447525,0.00017814767,0.000096097945,0.00006588073,0.00028026028,0.00029616777,0.00005079747,0.08696643,0.0003159041],"about_ca_topic_score_codex":0.5874302,"about_ca_topic_score_gemma":0.3166163,"teacher_disagreement_score":0.27081388,"about_ca_system_score_codex":0.00037164765,"about_ca_system_score_gemma":0.00032232323,"threshold_uncertainty_score":0.8715472},"labels":[],"label_agreement":null},{"id":"W2168861738","doi":"10.3201/eid1807.120249","title":"Timeliness of Nongovernmental versus Governmental Global Outbreak Communications","year":2012,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Data-Driven Disease Surveillance","field":"Medicine","cited_by":33,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"U.S. National Library of Medicine","keywords":"Outbreak; Infectious disease (medical specialty); Public health; Environmental health; Medicine; Disease; Virology; Pathology","score_opus":0.01813229160326166,"score_gpt":0.3207432524714487,"score_spread":0.302610960868187,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2168861738","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9179735,0.0028863356,0.00013729236,0.0001981506,0.0010093558,0.000406306,0.0032379183,0.00035677006,0.07379433],"genre_scores_gemma":[0.9986379,0.00010391941,0.00018433869,0.00015800992,0.00025077694,0.000036836893,0.0005089508,0.00002589056,0.00009335686],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9985521,0.00007118722,0.00031751106,0.00019364804,0.00052911835,0.00033645364],"domain_scores_gemma":[0.99838775,0.000098693694,0.00017859925,0.0008991581,0.000070195216,0.0003656086],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00008858461,0.00019571661,0.00030993507,0.000035396075,0.00012186979,0.000012330244,0.00021504026,0.000044078253,0.00042403763],"category_scores_gemma":[0.00024145389,0.00019832747,0.00020236276,0.00027478996,0.0002059986,0.00025405732,0.0003313561,0.0000893718,0.00015729756],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003497088,0.0017817465,0.98635435,0.0000777325,0.0002763767,0.0000039207907,0.000039411876,0.0000065097124,0.00020784297,0.0007641113,0.005535977,0.0046022944],"study_design_scores_gemma":[0.0037603986,0.00016722907,0.97134125,0.00007682379,0.0005227447,0.000026593138,0.0003878713,0.000249784,0.00017430662,0.000014132885,0.023014506,0.00026432824],"about_ca_topic_score_codex":0.00020478525,"about_ca_topic_score_gemma":0.000052789965,"teacher_disagreement_score":0.08066438,"about_ca_system_score_codex":0.0007880427,"about_ca_system_score_gemma":0.00008522952,"threshold_uncertainty_score":0.80875593},"labels":[],"label_agreement":null},{"id":"W2169748580","doi":"10.3201/eid1507.090043","title":"Frequency and Evolution of Azole Resistance in<i>Aspergillus fumigatus</i>Associated with Treatment Failure1","year":2009,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":749,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hôpital Maisonneuve-Rosemont","funders":"University of Manchester; University of Warwick","keywords":"Posaconazole; Itraconazole; Aspergillus fumigatus; Voriconazole; Azole; Microbiology; Aspergillosis; Drug resistance; Biology; Population; Aspergillus; Medicine; Antifungal; Immunology","score_opus":0.005796453545541764,"score_gpt":0.23932627062465484,"score_spread":0.23352981707911308,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2169748580","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99151915,0.0048709097,0.00007453376,0.00023473533,0.000029141811,0.00029353332,0.00002630692,0.000096051204,0.0028556627],"genre_scores_gemma":[0.9992853,0.00023432553,0.00004927693,0.00005802194,0.000029359475,0.000012767123,0.00002652999,0.000011580963,0.0002928417],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9989582,0.00005027178,0.0002536264,0.00029180077,0.00020357363,0.00024253124],"domain_scores_gemma":[0.9993759,0.00005184929,0.000104823695,0.00022786464,0.00011522796,0.00012434216],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00007053455,0.00017321734,0.0003532641,0.00012697994,0.000089282374,0.0000092569735,0.000030050553,0.000060304796,0.00002793089],"category_scores_gemma":[0.00018727712,0.0001373827,0.00007438096,0.00039180563,0.00011697098,0.00011518234,0.000006146071,0.00008304389,0.0000015437269],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00023439387,0.0006844645,0.99534553,0.00005397989,0.00005684152,0.000041154435,0.00020598728,0.000017010563,0.0015918155,0.000947159,0.00006300384,0.0007586439],"study_design_scores_gemma":[0.001959975,0.0006890115,0.9946967,0.00035277553,0.00014777134,0.00000342316,0.00011822679,0.0000237709,0.00025545995,0.0015532576,0.00006431515,0.00013534927],"about_ca_topic_score_codex":0.000257018,"about_ca_topic_score_gemma":0.003043952,"teacher_disagreement_score":0.007766171,"about_ca_system_score_codex":0.0004623979,"about_ca_system_score_gemma":0.00016808216,"threshold_uncertainty_score":0.5602304},"labels":[],"label_agreement":null},{"id":"W2169962614","doi":"10.3201/eid1205.050854","title":"Web-based Surveillance and Global<i>Salmonella</i>Distribution, 2000–2002","year":2006,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Salmonella and Campylobacter epidemiology","field":"Agricultural and Biological Sciences","cited_by":387,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Public Health Agency of Canada","funders":"British Columbia Centre for Disease Control","keywords":"Salmonella; Web application; Salmonella enterica; Biology; Microbiology; Environmental health; Computational biology; Computer science; World Wide Web; Geography; Medicine; Genetics; Bacteria","score_opus":0.006506362116374879,"score_gpt":0.21363113834704928,"score_spread":0.2071247762306744,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2169962614","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9925028,0.002796618,0.000047869467,0.00085091015,0.00024583164,0.00013709211,0.0005507981,0.0004071643,0.0024609007],"genre_scores_gemma":[0.99841285,0.00008896618,0.0000062366485,0.00045047546,0.0004224142,0.000023644548,0.00045683922,0.0000016292134,0.0001369199],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9985676,0.00017708231,0.00027345357,0.0004182002,0.00014066763,0.00042304167],"domain_scores_gemma":[0.999325,0.00024457095,0.000115402974,0.00008269915,0.00008138301,0.00015098047],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014904211,0.0002184078,0.00025955567,0.000009358308,0.00031303192,0.00006181236,0.00011917731,0.00009593363,0.000428419],"category_scores_gemma":[0.00011054834,0.00010549681,0.00011805022,0.00042283372,0.00012451712,0.000072775,0.000042965476,0.00007170136,0.00006506848],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000016426196,0.00012163455,0.97344625,0.000007995566,0.000009920156,0.000007346645,0.0000012043764,0.00016782944,0.0012305479,0.0003094589,0.019589063,0.005092326],"study_design_scores_gemma":[0.00030228632,0.00008205118,0.9353888,0.000009307136,0.000018600605,0.000015501424,0.000008456377,0.0003640557,0.000040265124,0.0012302031,0.06229365,0.00024683017],"about_ca_topic_score_codex":0.0013192063,"about_ca_topic_score_gemma":0.001123429,"teacher_disagreement_score":0.04270459,"about_ca_system_score_codex":0.00007573568,"about_ca_system_score_gemma":0.000025068197,"threshold_uncertainty_score":0.46908876},"labels":[],"label_agreement":null},{"id":"W2170543480","doi":"10.3201/eid1108.041354","title":"<i>Coxiella burnetii</i> Genotyping","year":2005,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":252,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"Irkutsk State University","keywords":"Coxiella burnetii; Q fever; Genotyping; Biology; Typing; Multilocus sequence typing; Rickettsiaceae; Intergenic region; Phylogenetic tree; Genetics; Molecular epidemiology; Rickettsiales; Genotype; Virology; Microbiology; Gene; Genome","score_opus":0.005687837333241672,"score_gpt":0.2642784009477214,"score_spread":0.25859056361447974,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2170543480","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9867228,0.0020761774,0.0004275452,0.00033144435,0.00019948394,0.00018308815,0.000025801057,0.00010577418,0.009927846],"genre_scores_gemma":[0.9963983,0.00031451238,0.00012766804,0.0007654803,0.001031265,0.000032089447,0.00012331366,0.00004422787,0.0011631373],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.99863863,0.00007739291,0.00020068188,0.0004272277,0.00019562677,0.0004604216],"domain_scores_gemma":[0.9992056,0.000022546801,0.000062834886,0.00040352956,0.00009517264,0.00021035128],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000098718374,0.00020266241,0.00015160484,0.0001008064,0.0002013422,0.00006952866,0.00020182806,0.000100584526,0.00028905817],"category_scores_gemma":[0.00015199212,0.00021548568,0.0001405743,0.0001729863,0.0000784422,0.000010788609,0.00014846645,0.00012210742,0.00023443013],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014683741,0.00042080777,0.22708096,0.00007129294,0.00021044514,0.000018596558,0.00011807556,0.003141823,0.7219964,0.00012403382,0.028119305,0.018551413],"study_design_scores_gemma":[0.0015724596,0.00041153532,0.08208008,0.000043997577,0.00008890915,0.00010302208,0.00005175238,0.0007048709,0.118948504,0.00006637983,0.79500866,0.0009198481],"about_ca_topic_score_codex":0.000035380657,"about_ca_topic_score_gemma":0.00006231619,"teacher_disagreement_score":0.76688933,"about_ca_system_score_codex":0.000046574627,"about_ca_system_score_gemma":0.00009100795,"threshold_uncertainty_score":0.8787251},"labels":[],"label_agreement":null},{"id":"W2170801384","doi":"10.3201/eid1211.060635","title":"Identical Genotype B3 Sequences from Measles Patients in 4 Countries, 2005","year":2006,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Virology and Viral Diseases","field":"Medicine","cited_by":32,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Government of New Brunswick; Public Health Agency of Canada","funders":"","keywords":"Measles; Genotype; Measles virus; Virology; Virus; Medicine; Biology; Environmental health; Vaccination; Genetics; Gene","score_opus":0.005700609856479696,"score_gpt":0.25110395643747924,"score_spread":0.24540334658099955,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2170801384","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99416995,0.0028735073,0.00003789942,0.00027791286,0.00033742096,0.00024174627,0.000156951,0.00020242142,0.001702202],"genre_scores_gemma":[0.99813926,0.00016797935,0.0000138765745,0.00070550735,0.00036528954,0.000034110286,0.00039728315,0.000022423093,0.00015424336],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99856144,0.000078566205,0.00034584067,0.00033702445,0.00029629402,0.00038083977],"domain_scores_gemma":[0.9994018,0.0000696973,0.00007936864,0.00020337752,0.000076689066,0.00016905786],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.000057342728,0.00019974905,0.00029698518,0.00016648768,0.00013892443,0.000030861578,0.00007720213,0.00009966224,0.0009782601],"category_scores_gemma":[0.00021725576,0.00018262521,0.000115818286,0.00017583379,0.00017951199,0.00018052229,0.000038664773,0.00013960668,0.00022076773],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00019229643,0.0007414003,0.9938718,0.00003568648,0.00005279411,0.00008234939,0.000022860355,0.00008814583,0.00005551125,0.00046132508,0.003887422,0.00050839013],"study_design_scores_gemma":[0.0016896592,0.00012073958,0.99154186,0.000078476754,0.00024811272,0.000002766576,0.000014423645,0.0001327056,0.00005353795,0.0034717056,0.0024568297,0.00018920355],"about_ca_topic_score_codex":0.0035368018,"about_ca_topic_score_gemma":0.0013396617,"teacher_disagreement_score":0.0039693485,"about_ca_system_score_codex":0.00011947337,"about_ca_system_score_gemma":0.00013393495,"threshold_uncertainty_score":0.999935},"labels":[],"label_agreement":null},{"id":"W2170812681","doi":"10.3201/eid1007.030703","title":"SARS Control and Psychological Effects of Quarantine, Toronto, Canada","year":2004,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"COVID-19 and Mental Health","field":"Psychology","cited_by":2019,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of Toronto","funders":"University of Toronto; University Health Network","keywords":"Quarantine; Outbreak; Depression (economics); Medicine; Coronavirus disease 2019 (COVID-19); Psychiatry; Distress; Psychological distress; Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2); Infectious disease (medical specialty); Disease; Demography; Mental health; Clinical psychology; Virology; Internal medicine; Pathology","score_opus":0.013098057060667776,"score_gpt":0.3468749058113744,"score_spread":0.3337768487507066,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2170812681","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99030304,0.0047919727,0.00027620775,0.0002319818,0.001325512,0.0003419127,0.00003618275,0.00008772526,0.0026054874],"genre_scores_gemma":[0.9982732,0.00011718974,0.0000066625457,0.0013664385,0.00010590956,0.00004808209,0.0000059660338,0.000014269641,0.000062266714],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9989814,0.00007860494,0.0002182135,0.0002797324,0.00014140925,0.0003005997],"domain_scores_gemma":[0.9993187,0.00018702299,0.00008951947,0.00020029306,0.000025479201,0.00017897921],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000051764073,0.00014772904,0.00024967027,0.000032329874,0.000103161656,0.0000066709786,0.00006793202,0.000051570016,0.00017915535],"category_scores_gemma":[0.000070070324,0.00013492261,0.0000600255,0.00008227103,0.00006867877,0.000049125236,0.000015767724,0.00007452679,0.000005891538],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005882407,0.0031420512,0.9281488,0.001038431,0.00035181644,0.00031516608,0.0014390309,0.00014679131,0.0013990939,0.01521732,0.009969666,0.038243566],"study_design_scores_gemma":[0.0056312466,0.0007487627,0.98904073,0.000073882045,0.000101650796,0.000028894543,0.00014293753,0.0000058291403,0.000093907816,0.00050526095,0.0034087729,0.00021811582],"about_ca_topic_score_codex":0.75899917,"about_ca_topic_score_gemma":0.45801368,"teacher_disagreement_score":0.30098546,"about_ca_system_score_codex":0.00028837688,"about_ca_system_score_gemma":0.00021136989,"threshold_uncertainty_score":0.5518761},"labels":[],"label_agreement":null},{"id":"W2171157657","doi":"10.3201/eid1205.051284","title":"Spatial Analysis of Sleeping Sickness, Southeastern Uganda, 1970–2003","year":2006,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Mosquito-borne diseases and control","field":"Medicine","cited_by":30,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"International Development Research Centre; Public Health Agency; Public Health Agency of Canada; University of Guelph","keywords":"Public health; Geography; Christian ministry; Distribution (mathematics); Socioeconomics; Incidence (geometry); Epicenter; Cluster (spacecraft); Environmental health; Demography; Medicine; Political science","score_opus":0.004707214507563591,"score_gpt":0.2402782174918735,"score_spread":0.2355710029843099,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2171157657","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98731375,0.0023112223,0.006053003,0.000146951,0.00031597362,0.0003445725,0.00019222575,0.00022992838,0.0030923528],"genre_scores_gemma":[0.99847096,0.000020951244,0.000014239396,0.0002456667,0.00051561004,0.00004504969,0.00027399286,0.000035717036,0.00037779432],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9983026,0.000060366376,0.00047964352,0.00039121718,0.0004021996,0.0003639716],"domain_scores_gemma":[0.9987528,0.00005031852,0.00022790817,0.0004546208,0.0003095216,0.00020488535],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00007901144,0.00024593406,0.0006754876,0.00047637144,0.0001389469,0.000030451749,0.00008874787,0.00008563089,0.00084565347],"category_scores_gemma":[0.00014044976,0.00023008553,0.00056268706,0.0013004867,0.00008529921,0.00008320106,0.000040988347,0.00012913949,0.000026540709],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00017358678,0.0006516034,0.9866045,0.00012619885,0.0014552214,0.000036676178,0.00006304956,0.0022957232,0.00039576515,0.00035243065,0.00045669937,0.007388546],"study_design_scores_gemma":[0.0020181318,0.0001371941,0.9662656,0.00008614386,0.011148293,0.00000508346,0.00006969635,0.017987624,0.000104152496,0.0001207127,0.001786057,0.000271318],"about_ca_topic_score_codex":0.0039709527,"about_ca_topic_score_gemma":0.0005850188,"teacher_disagreement_score":0.020338906,"about_ca_system_score_codex":0.000039806488,"about_ca_system_score_gemma":0.0001375904,"threshold_uncertainty_score":0.93826157},"labels":[],"label_agreement":null},{"id":"W2171569380","doi":"10.3201/eid1605.091894","title":"Contagious Period for Pandemic (H1N1) 2009","year":2010,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Influenza Virus Research Studies","field":"Medicine","cited_by":53,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Université Laval; Montreal Children's Hospital; Institut National de Santé Publique du Québec; BC Centre for Disease Control; Public Health Agency of Canada","funders":"Institut National de Santé Publique du Québec; Université Laval","keywords":"Pandemic; Virus; Viral shedding; Virology; Isolation (microbiology); Transmission (telecommunications); Medicine; Viral culture; Virus isolation; Coronavirus disease 2019 (COVID-19); Biology; Internal medicine; Infectious disease (medical specialty); Disease; Microbiology","score_opus":0.030725004939868465,"score_gpt":0.3686437644836223,"score_spread":0.33791875954375383,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2171569380","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9890514,0.0022335371,0.00024984256,0.0005888679,0.00082859234,0.0011304888,0.00013983286,0.0006755682,0.005101886],"genre_scores_gemma":[0.99633914,0.00016960572,0.00012893604,0.0009128997,0.000803875,0.00038613938,0.000034922687,0.000049971597,0.0011744921],"study_design_codex":"observational","study_design_gemma":"not_applicable","domain_scores_codex":[0.99852514,0.000026170059,0.00025352015,0.0003417598,0.0003055425,0.0005478471],"domain_scores_gemma":[0.99876964,0.00017374165,0.00007055727,0.00036061878,0.00032814988,0.0002972784],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00016485096,0.0002222038,0.0003610494,0.00019424166,0.00042393262,0.000046854275,0.00009631662,0.00008868427,0.00039836974],"category_scores_gemma":[0.0016743346,0.00019238172,0.00024759845,0.00018627105,0.00019796373,0.00010438086,0.000067843044,0.00034541058,0.000110546855],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0004103588,0.00044101698,0.9372175,0.00029400314,0.00038336305,0.000046718003,0.00043234133,0.0000191098,0.0151018035,0.0007119903,0.027377158,0.017564652],"study_design_scores_gemma":[0.010421757,0.0012773818,0.44586834,0.00014964968,0.0007402111,0.00025908294,0.00036875976,0.0006857111,0.0012218605,0.0017447512,0.53643405,0.00082840846],"about_ca_topic_score_codex":0.000110944435,"about_ca_topic_score_gemma":0.00014888629,"teacher_disagreement_score":0.5090569,"about_ca_system_score_codex":0.00007545568,"about_ca_system_score_gemma":0.00021433168,"threshold_uncertainty_score":0.7845099},"labels":[],"label_agreement":null},{"id":"W2171615975","doi":"10.3201/eid1604.091636","title":"Pandemic (H1N1) 2009 Infection in Swine Herds, Manitoba, Canada","year":2010,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Influenza Virus Research Studies","field":"Medicine","cited_by":98,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Agriculture Food and Rural Development","funders":"","keywords":"Outbreak; Pandemic; Virology; Herd; Virus; Influenza A virus; H1N1 influenza; Biology; Veterinary medicine; Coronavirus disease 2019 (COVID-19); Medicine; Infectious disease (medical specialty); Disease","score_opus":0.02419170779012433,"score_gpt":0.31734741897973523,"score_spread":0.2931557111896109,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2171615975","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9930676,0.000893482,0.00001126525,0.00027946229,0.0009053862,0.00045674233,0.00003466347,0.00026410926,0.004087285],"genre_scores_gemma":[0.9977936,0.00048094415,0.000013813296,0.000594793,0.0006104851,0.0001112141,0.000029320927,0.00003749638,0.00032830785],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9982014,0.000059886333,0.00033273106,0.0003470216,0.0004911184,0.0005678458],"domain_scores_gemma":[0.9989993,0.00010855282,0.00007659404,0.00034725075,0.00019288236,0.0002754117],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001742231,0.00024569628,0.00034659824,0.00032516656,0.00023275128,0.000029990564,0.00007721628,0.00008720775,0.0003447925],"category_scores_gemma":[0.001055254,0.00022968854,0.00009682957,0.0005377858,0.00009879686,0.00014922868,0.00008559689,0.0006713601,0.000052985255],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006992189,0.0002057788,0.9815508,0.000111569774,0.000080816004,0.00008417142,0.000041474046,0.00011175792,0.0014164979,0.00003684725,0.010987791,0.0053025805],"study_design_scores_gemma":[0.0014955217,0.000101986945,0.9538463,0.00007469497,0.00006757794,0.000051887982,0.00004596308,0.00015109811,0.00020962978,0.00011290319,0.043614812,0.00022767432],"about_ca_topic_score_codex":0.72461796,"about_ca_topic_score_gemma":0.94826174,"teacher_disagreement_score":0.2236438,"about_ca_system_score_codex":0.00046393782,"about_ca_system_score_gemma":0.0008135897,"threshold_uncertainty_score":0.93664265},"labels":[],"label_agreement":null},{"id":"W2186965340","doi":"10.3201/eid1709.102034","title":"Ciprofloxacin-Resistant<i>Shigella sonnei</i>among Men Who Have Sex with Men, Canada, 2010","year":2011,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Escherichia coli research studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":48,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Centre Hospitalier de l’Université de Montréal; Hôpital Saint-Luc","funders":"Université de Montréal","keywords":"Shigella sonnei; Ciprofloxacin; Men who have sex with men; Shigella; Microbiology; Shigellosis; Biology; Medicine; Demography; Virology; Antibiotics; Salmonella; Genetics; Bacteria; Human immunodeficiency virus (HIV); Syphilis","score_opus":0.00796324466805753,"score_gpt":0.22703277156132773,"score_spread":0.2190695268932702,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2186965340","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8920943,0.0016055896,0.00015378495,0.00008888537,0.000073281866,0.00039213875,0.000079007776,0.00006896176,0.10544403],"genre_scores_gemma":[0.98215115,0.00025211423,0.000033285087,0.00016342764,0.00023910352,0.00015148942,0.00004514039,0.000059996677,0.016904298],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9981336,0.000117202486,0.00021517,0.0005535108,0.00036584068,0.0006146968],"domain_scores_gemma":[0.99884844,0.000025885818,0.00011282597,0.00051100174,0.00019605414,0.00030577712],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00012063666,0.00032277807,0.00026759715,0.00006476776,0.00039175557,0.000039503597,0.00024195181,0.00008244128,0.000110193476],"category_scores_gemma":[0.00014790827,0.00027893513,0.000077528886,0.00015611718,0.00022585387,0.000012132102,0.00022101105,0.00016298355,0.000004921545],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00022788298,0.0001889059,0.828279,0.000097612785,0.00061573397,0.000075808326,0.00031361988,0.000085598396,0.0149021875,0.000043401076,0.15472393,0.0004463204],"study_design_scores_gemma":[0.0018447385,0.0010561025,0.9201926,0.00008808965,0.00025653766,0.000009579564,0.0022677006,0.0006157997,0.041090176,0.000085559295,0.03125835,0.0012347954],"about_ca_topic_score_codex":0.20950957,"about_ca_topic_score_gemma":0.4031941,"teacher_disagreement_score":0.19368453,"about_ca_system_score_codex":0.00008227936,"about_ca_system_score_gemma":0.0005287317,"threshold_uncertainty_score":0.99996626},"labels":[],"label_agreement":null},{"id":"W2190614071","doi":"10.3201/eid2112.142004","title":"Methicillin-Resistant<i>Staphylococcus aureus</i>Prevalence among Captive Chimpanzees, Texas, USA, 20121","year":2015,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Antimicrobial Resistance in Staphylococcus","field":"Medicine","cited_by":21,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"National Institutes of Health","keywords":"Staphylococcus aureus; Methicillin-resistant Staphylococcus aureus; Transmission (telecommunications); Staphylococcal infections; Medicine; Veterinary medicine; Biology; Bacteria","score_opus":0.020241261170001662,"score_gpt":0.28840173020051113,"score_spread":0.2681604690305095,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2190614071","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9746547,0.0065329573,0.0013233162,0.00037244955,0.00096767436,0.0011780238,0.0003067485,0.00061853055,0.014045608],"genre_scores_gemma":[0.9930817,0.0004305647,0.00028461733,0.00088719284,0.0007302422,0.00009947744,0.000065545566,0.00012805504,0.0042925966],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9958009,0.0002730949,0.0007643566,0.0009641384,0.0010306034,0.001166882],"domain_scores_gemma":[0.9962313,0.00027967524,0.00041249063,0.0010294213,0.0008053718,0.0012417332],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0005453821,0.0006811441,0.00088486326,0.00044634767,0.00038725944,0.0001223412,0.00036710533,0.00026902359,0.0007147504],"category_scores_gemma":[0.0017208296,0.0006383054,0.0004849647,0.00093529694,0.00075443287,0.00045375808,0.00021788808,0.0006922661,0.0006122667],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00065750227,0.00075023074,0.926473,0.0005797562,0.0004497586,0.0003450203,0.00062806887,0.00063709245,0.011640626,0.00051774207,0.05644295,0.00087820616],"study_design_scores_gemma":[0.005111786,0.001003743,0.94438154,0.0012327391,0.0017238538,0.000022376598,0.0006809047,0.00030404012,0.0061399154,0.0011475023,0.036590178,0.001661428],"about_ca_topic_score_codex":0.0014882457,"about_ca_topic_score_gemma":0.0006192681,"teacher_disagreement_score":0.019852772,"about_ca_system_score_codex":0.00058171264,"about_ca_system_score_gemma":0.0007949395,"threshold_uncertainty_score":0.99960685},"labels":[],"label_agreement":null},{"id":"W2203488740","doi":"10.3201/eid2201.151330","title":"Avian Influenza A(H7N9) Virus Infection in 2 Travelers Returning from China to Canada, January 20151","year":2015,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Influenza Virus Research Studies","field":"Medicine","cited_by":34,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"BC Centre for Disease Control; University of Manitoba; Public Health Agency of Canada; University of British Columbia; Vancouver Coastal Health","funders":"British Columbia Centre for Disease Control; Michael Smith Health Research BC","keywords":"China; Influenza A virus subtype H5N1; Virus; Virology; Influenza A virus; Outpatient visits; Population; Medicine; Biology; Geography; Environmental health; Health care","score_opus":0.04158062161244818,"score_gpt":0.3388071888245811,"score_spread":0.2972265672121329,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2203488740","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9919071,0.0012887049,0.00005905578,0.0005203286,0.0006757679,0.00073964015,0.0001520329,0.00025519682,0.004402174],"genre_scores_gemma":[0.99656475,0.00014293866,0.00005087615,0.0022329665,0.0005134148,0.00016591045,0.00006655015,0.000059994523,0.00020258986],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9970743,0.00018111414,0.0005218393,0.0005623695,0.000885497,0.0007748674],"domain_scores_gemma":[0.9981046,0.00012386298,0.00011801879,0.00045063675,0.00026132644,0.00094160833],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00028392737,0.00038156472,0.0005615974,0.0005810061,0.00024306789,0.000060088692,0.00012982717,0.00010516857,0.000120971745],"category_scores_gemma":[0.0021826269,0.00037702054,0.00012261825,0.0009105957,0.00008379627,0.00022494771,0.00016542654,0.00053527777,0.000097145836],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00040071923,0.0002067685,0.96922064,0.00006121143,0.00017503771,0.00019734957,0.0020236028,0.0036501775,0.0005127568,0.000009961666,0.01987065,0.00367114],"study_design_scores_gemma":[0.0024952467,0.00028888052,0.96620893,0.00024997865,0.00010631064,0.000011509361,0.00031840746,0.00030823934,0.00057548325,0.0001322872,0.028899057,0.00040567823],"about_ca_topic_score_codex":0.89142877,"about_ca_topic_score_gemma":0.7604524,"teacher_disagreement_score":0.13097641,"about_ca_system_score_codex":0.0017121442,"about_ca_system_score_gemma":0.001420662,"threshold_uncertainty_score":0.99986815},"labels":[],"label_agreement":null},{"id":"W2203537645","doi":"10.3201/eid2201.151247","title":"Decline in Decreased Cephalosporin Susceptibility and Increase in Azithromycin Resistance in<i>Neisseria gonorrhoeae</i>, Canada","year":2015,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Reproductive tract infections research","field":"Immunology and Microbiology","cited_by":41,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Saskatchewan Disease Control Laboratory; BC Centre for Disease Control; Public Health Ontario; Queen Elizabeth II Health Sciences Centre; Provincial Laboratory of Public Health; Dr. Georges-L.-Dumont University Hospital Centre; Public Health Agency of Canada","funders":"Public Health Agency; Public Health Agency of Canada","keywords":"Neisseria gonorrhoeae; Cephalosporin; Azithromycin; Microbiology; Antimicrobial; Antibiotic resistance; Drug resistance; Biology; Antibiotics; Medicine","score_opus":0.011938824607115005,"score_gpt":0.2709234804677915,"score_spread":0.25898465586067654,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2203537645","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99145067,0.005849335,0.0000048845604,0.00036921477,0.0003747918,0.00052357884,0.000044331562,0.00007070402,0.0013124682],"genre_scores_gemma":[0.9993119,0.00012286086,0.000015467062,0.00008509111,0.000036069898,0.00012176709,0.00007594598,0.000025068211,0.00020579693],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99741775,0.0006879846,0.0005308432,0.0007061825,0.00006202705,0.00059521076],"domain_scores_gemma":[0.99877703,0.00033143724,0.00009816163,0.0005013553,0.000143571,0.00014845937],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0008198789,0.00026328885,0.00043095034,0.00050408626,0.000097602824,0.000023649216,0.00016572227,0.0001252629,0.00017244137],"category_scores_gemma":[0.0026579704,0.00027975254,0.00004148615,0.0010401345,0.0002224758,0.00025375493,0.00014328511,0.00048955984,0.00002432864],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00049855857,0.000734574,0.99443436,0.00005321093,0.000025129688,0.000047576712,0.0002025987,0.00023207512,0.002109393,0.00014617572,0.00075214903,0.0007641931],"study_design_scores_gemma":[0.0032316642,0.00008260772,0.9896122,0.00007505035,0.0000128528045,0.000025623965,0.00030394044,0.000011750761,0.00047528223,0.0012375084,0.004648952,0.00028257005],"about_ca_topic_score_codex":0.74503714,"about_ca_topic_score_gemma":0.9763733,"teacher_disagreement_score":0.23133618,"about_ca_system_score_codex":0.0009718339,"about_ca_system_score_gemma":0.0013370765,"threshold_uncertainty_score":0.9999655},"labels":[],"label_agreement":null},{"id":"W2234882386","doi":"10.3201/eid2109.150472","title":"Acute Respiratory Infections in Travelers Returning from MERS-CoV–Affected Areas","year":2015,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Travel-related health issues","field":"Medicine","cited_by":17,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Public Health Ontario","funders":"","keywords":"Middle East respiratory syndrome coronavirus; Medicine; Respiratory system; Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2); Intensive care medicine; Coronavirus disease 2019 (COVID-19); Betacoronavirus; Respiratory tract infections; Virology; Pandemic; 2019-20 coronavirus outbreak; Environmental health; Immunology; Outbreak; Internal medicine; Infectious disease (medical specialty); Disease","score_opus":0.03166512542943449,"score_gpt":0.33061171988571403,"score_spread":0.2989465944562795,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2234882386","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99037623,0.0021201558,0.0001523217,0.00044837224,0.0009828805,0.0006660532,0.00007432054,0.0010094281,0.004170253],"genre_scores_gemma":[0.9977351,0.00008956719,0.00006906251,0.0011606498,0.00045730485,0.000119183096,0.00012856125,0.00009055653,0.00015004186],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9974932,0.00025532694,0.00059056596,0.0005770692,0.00045890996,0.00062491285],"domain_scores_gemma":[0.9982651,0.00017834196,0.00019557198,0.0004829179,0.00021476249,0.0006633465],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00024085003,0.00036576367,0.0005915665,0.0007124124,0.0001997458,0.000043251952,0.000104310566,0.00024331044,0.0001586181],"category_scores_gemma":[0.00090530043,0.00037536537,0.00017155694,0.0010227967,0.00012363204,0.00026483138,0.000052079646,0.00071075326,0.00018072185],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002592168,0.0008224369,0.98195964,0.00009712775,0.00046270475,0.00043461818,0.002850956,0.00038230713,0.004015221,0.000093637296,0.0060272617,0.0025948905],"study_design_scores_gemma":[0.010236202,0.0011175789,0.965143,0.0008248305,0.001074093,0.000085858876,0.00080089096,0.00082140893,0.002067762,0.000743737,0.016316228,0.00076839543],"about_ca_topic_score_codex":0.0021984545,"about_ca_topic_score_gemma":0.0007857242,"teacher_disagreement_score":0.016816607,"about_ca_system_score_codex":0.00064167567,"about_ca_system_score_gemma":0.0006397013,"threshold_uncertainty_score":0.9998698},"labels":[],"label_agreement":null},{"id":"W2248357045","doi":"10.3201/eid1212.060448","title":"<i>Borrelia garini</i>i in Seabird Ticks (<i>Ixodes uria</i>e), Atlantic Coast, North America","year":2006,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Vector-borne infectious diseases","field":"Immunology and Microbiology","cited_by":70,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Memorial University of Newfoundland","funders":"Maine Medical Center Research Institute","keywords":"Borrelia garinii; Biology; Borrelia; Larus; Seabird; Zoology; Borrelia burgdorferi; Ixodes ricinus; Enzootic; Tick; Lyme disease; Ecology; Virology; Fishery; Genetics; Herring","score_opus":0.004614469333656045,"score_gpt":0.2137532585729713,"score_spread":0.20913878923931525,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2248357045","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98867667,0.0043096747,0.00022099288,0.00011757015,0.001481591,0.00050844136,0.0001806038,0.0011840418,0.0033204295],"genre_scores_gemma":[0.99729985,0.00020646391,0.000011335649,0.00051316665,0.0002772673,0.00019372457,0.00077289337,0.00009883715,0.0006264469],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9968609,0.0003730649,0.0007241985,0.0008317201,0.000137657,0.0010724678],"domain_scores_gemma":[0.99849224,0.00033950727,0.00028401535,0.00062601315,0.0001423006,0.000115916424],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00009715313,0.0005938081,0.0006854954,0.00040302897,0.00043871437,0.0000854095,0.00033574883,0.00020484279,0.0010385857],"category_scores_gemma":[0.0002624137,0.00060398685,0.00034098924,0.0009115954,0.00040891222,0.00027331195,0.00018916324,0.00046941524,0.0014317564],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010802337,0.0014133371,0.96989834,0.000071008326,0.0001852776,0.00008852608,0.00016425647,0.0024592432,0.0012571606,0.00018272495,0.02278048,0.001391608],"study_design_scores_gemma":[0.0026229399,0.00026719505,0.9365105,0.000088034794,0.0003116146,0.000099527664,0.00009557593,0.000054828564,0.00037883004,0.0005382752,0.05816987,0.00086282456],"about_ca_topic_score_codex":0.016072668,"about_ca_topic_score_gemma":0.013190679,"teacher_disagreement_score":0.03538939,"about_ca_system_score_codex":0.0002782376,"about_ca_system_score_gemma":0.00031547257,"threshold_uncertainty_score":0.9998746},"labels":[],"label_agreement":null},{"id":"W2313763461","doi":"10.3201/eid2102.131879","title":"Simulation Study of the Effect of Influenza and Influenza Vaccination on Risk of Acquiring Guillain-Barré Syndrome","year":2015,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Peripheral Neuropathies and Disorders","field":"Medicine","cited_by":15,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute for Clinical Evaluative Sciences; Ottawa Hospital; Public Health Ontario; University of Toronto; University of Ottawa","funders":"Canadian Institutes of Health Research; Ontario Ministry of Health and Long-Term Care; Institute for Clinical Evaluative Sciences; University of Ottawa; Sanofi; University of Toronto; GlaxoSmithKline; Department of Family and Community Medicine, University of Toronto; Ottawa Hospital Research Institute; Pfizer","keywords":"Vaccination; Medicine; Guillain-Barre syndrome; Incidence (geometry); Context (archaeology); Confidence interval; Influenza vaccine; Pediatrics; Immunology; Environmental health; Internal medicine; Biology","score_opus":0.01645216083401019,"score_gpt":0.30763499939676403,"score_spread":0.29118283856275384,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2313763461","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9985789,0.0004002065,0.0000133365875,0.000007429152,0.0001473924,0.0006321325,0.000009295288,0.000038719907,0.00017258075],"genre_scores_gemma":[0.99986285,0.000006834054,0.0000014898167,0.00007440413,0.000019123318,0.000013319594,9.808606e-7,0.000017014581,0.000003967819],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99882954,0.00022888831,0.0003449898,0.00016651551,0.0003218082,0.00010827487],"domain_scores_gemma":[0.99887633,0.00027767537,0.00032716987,0.00029047122,0.00014754031,0.00008081643],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00020543789,0.00014012348,0.0003304305,0.00013522367,0.00007047189,0.0000057602792,0.000057633504,0.00003584508,0.000011729997],"category_scores_gemma":[0.001931338,0.00009710657,0.00009019421,0.0002937717,0.000046377038,0.000075334705,0.000062240426,0.000081821134,5.6101777e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00039410614,0.00030049714,0.8327307,0.00020391177,0.000078626144,0.0000021584228,0.00059424073,0.16415182,0.00012038063,0.0000043822793,0.000017664579,0.0014015114],"study_design_scores_gemma":[0.0055811647,0.004841043,0.9830953,0.0001378555,0.00039190834,0.00000315577,0.00034133528,0.0050845793,0.00033321825,0.000053817897,0.000050041708,0.000086604785],"about_ca_topic_score_codex":0.0002981924,"about_ca_topic_score_gemma":0.000034103894,"teacher_disagreement_score":0.15906724,"about_ca_system_score_codex":0.000033420238,"about_ca_system_score_gemma":0.000028688211,"threshold_uncertainty_score":0.3959891},"labels":[],"label_agreement":null},{"id":"W2315140246","doi":"10.3201/eid2101.140156","title":"<i>Burkholderia pseudomallei</i>Sequence Type 562 in China and Australia","year":2014,"lang":"en","type":"letter","venue":"Emerging infectious diseases","topic":"Burkholderia infections and melioidosis","field":"Medicine","cited_by":20,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Toronto General Hospital","funders":"Canadian Institutes of Health Research; Natural Science Foundation of Hainan Province","keywords":"Multilocus sequence typing; Burkholderia pseudomallei; Melioidosis; Multiple Loci VNTR Analysis; Pulsed-field gel electrophoresis; Biology; Geography; Variable number tandem repeat; Microbiology; Genotype; Genetics; Gene","score_opus":0.030679154407370426,"score_gpt":0.30210902938534,"score_spread":0.2714298749779696,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2315140246","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8216312,0.0017812842,0.0000929938,0.16304158,0.0045943535,0.00172616,0.00010660455,0.0009510669,0.0060747867],"genre_scores_gemma":[0.8389502,0.0009964899,0.00008860622,0.15001488,0.005217183,0.00021584824,0.0005709571,0.00018867216,0.0037571515],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9974408,0.00014198881,0.0005349818,0.0008279284,0.0003629814,0.0006913247],"domain_scores_gemma":[0.99860984,0.000094498246,0.00022276705,0.00066007045,0.00016318275,0.00024964317],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00015115687,0.00061247504,0.0008978766,0.0006651972,0.00018981408,0.00010974885,0.00012808107,0.00067928655,0.00092693546],"category_scores_gemma":[0.00030969104,0.0005922493,0.00020916865,0.0007866247,0.00020908957,0.00014916783,0.00008812917,0.0014763663,0.00013174787],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000041915588,0.0001870615,0.15886353,0.0009945799,0.00018107635,0.00071941275,0.00007275656,0.000029293462,0.0005191714,0.000051778457,0.8375624,0.00077702024],"study_design_scores_gemma":[0.0023253993,0.00064210116,0.13863046,0.0011842465,0.0008974542,0.0010003439,0.000012798702,0.00009496343,0.00008295044,0.000298677,0.85383093,0.0009996555],"about_ca_topic_score_codex":0.0016033784,"about_ca_topic_score_gemma":0.000070556045,"teacher_disagreement_score":0.02023306,"about_ca_system_score_codex":0.00019288286,"about_ca_system_score_gemma":0.00018770978,"threshold_uncertainty_score":0.99998635},"labels":[],"label_agreement":null},{"id":"W2319024183","doi":"10.3201/eid1112.010977","title":"Resistant<i>Salmonella</i>Virchow in Quail Products","year":2005,"lang":"en","type":"letter","venue":"Emerging infectious diseases","topic":"Antibiotic Resistance in Bacteria","field":"Biochemistry, Genetics and Molecular Biology","cited_by":17,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Quail; Biology; Medicine; Internal medicine","score_opus":0.00709262429420874,"score_gpt":0.23815217363147118,"score_spread":0.23105954933726244,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2319024183","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.74000484,0.019141395,0.00017034273,0.21540646,0.0043515475,0.0020358374,0.0007099047,0.0005042498,0.017675422],"genre_scores_gemma":[0.685546,0.0034525923,0.00030731503,0.25505155,0.029139766,0.0001853133,0.0041149915,0.0005871477,0.021615332],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99691826,0.00025523762,0.00055028516,0.001160511,0.00035903126,0.0007566758],"domain_scores_gemma":[0.99833393,0.000044426262,0.00030460104,0.0010809874,0.00014242074,0.00009363712],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00015414176,0.0005896466,0.0005080682,0.00024229736,0.00012796099,0.00010623982,0.00042734464,0.0007224955,0.00011130586],"category_scores_gemma":[0.0005323466,0.0006317671,0.00022624781,0.00030975422,0.00018912346,0.00001096842,0.00016909749,0.00075023086,0.00008438558],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009220692,0.0001194794,0.028718913,0.00037805462,0.00012142282,0.00023324578,0.000024943323,0.00005730632,0.009783845,0.0000064572973,0.9599437,0.0005204287],"study_design_scores_gemma":[0.000515266,0.00013245926,0.011882409,0.00018803102,0.0000881674,0.00002185506,0.000012123667,0.0000044801736,0.0015787702,0.00004468311,0.98473877,0.0007929598],"about_ca_topic_score_codex":0.000082582126,"about_ca_topic_score_gemma":0.00016302729,"teacher_disagreement_score":0.054458857,"about_ca_system_score_codex":0.00013251817,"about_ca_system_score_gemma":0.00031151337,"threshold_uncertainty_score":0.99961334},"labels":[],"label_agreement":null},{"id":"W2320282184","doi":"10.3201/eid2106.141578","title":"Extensively Drug-Resistant New Delhi Metallo-β-Lactamase–Encoding Bacteria in the Environment, Dhaka, Bangladesh, 2012","year":2015,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Antibiotic Resistance in Bacteria","field":"Biochemistry, Genetics and Molecular Biology","cited_by":59,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Institute of Circulatory and Respiratory Health; Cardiff University; Medical Research Council; National Institute for Social Care and Health Research","keywords":"New delhi; Carriage; Bacteria; Escherichia coli; Drug resistance; Biology; Microbiology; Multi drug resistant; Gene; Medicine; Genetics","score_opus":0.013937680235004211,"score_gpt":0.24554587999651875,"score_spread":0.23160819976151453,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2320282184","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9935321,0.0027696402,0.00060497294,0.0003368536,0.0004214958,0.00031121203,0.000042051583,0.000043861182,0.0019377891],"genre_scores_gemma":[0.99720347,0.00027722472,0.00022132826,0.0004492728,0.00045868327,0.000021961918,0.00016817442,0.000047034002,0.001152845],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9981251,0.00024332339,0.0003587035,0.0005150436,0.00028767713,0.0004701867],"domain_scores_gemma":[0.9988792,0.000043536555,0.00017450863,0.0005993959,0.00005137383,0.00025199822],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00029166258,0.00031589935,0.00025895282,0.000090064714,0.00013830297,0.000111650144,0.00035290432,0.0000994139,0.00017367484],"category_scores_gemma":[0.00025317643,0.00026012084,0.00016185975,0.00016042142,0.00013138498,0.000034316192,0.00014548506,0.00013350892,0.00007002679],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00071247114,0.0009438816,0.43915012,0.00011513064,0.000436372,0.00020503899,0.0012360825,0.0009772343,0.42256215,0.0007044111,0.13030906,0.0026480313],"study_design_scores_gemma":[0.0043122964,0.0005625715,0.5745926,0.00016430332,0.00045687804,0.00008981155,0.002290109,0.000100238154,0.013414508,0.001305688,0.40097648,0.001734544],"about_ca_topic_score_codex":0.00020918346,"about_ca_topic_score_gemma":0.00019563075,"teacher_disagreement_score":0.40914765,"about_ca_system_score_codex":0.00008053453,"about_ca_system_score_gemma":0.00017946931,"threshold_uncertainty_score":0.9999851},"labels":[],"label_agreement":null},{"id":"W2329103016","doi":"10.3201/eid2107.141829","title":"Readability of Ebola Information on Websites of Public Health Agencies, United States, United Kingdom, Canada, Australia, and Europe","year":2015,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Health Literacy and Information Accessibility","field":"Health Professions","cited_by":17,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Readability; Public health; Kingdom; Public information; Ebolavirus; Political science; Medicine; Library science; Geography; Ebola virus; Environmental health; Public administration; Virology; Computer science; Biology; Outbreak; Pathology","score_opus":0.13088757212804225,"score_gpt":0.4103212038724302,"score_spread":0.27943363174438796,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2329103016","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9952335,0.000052110445,0.00034924524,0.00097031717,0.0004025408,0.0006816182,0.0008279457,0.00010693443,0.0013758008],"genre_scores_gemma":[0.9939595,0.00004584485,0.00006146423,0.0040319306,0.00003945789,0.00003391038,0.0016746825,0.000010283297,0.00014292565],"study_design_codex":"observational","study_design_gemma":"not_applicable","domain_scores_codex":[0.99565977,0.0012995607,0.0018723807,0.00016913857,0.0004978992,0.0005012264],"domain_scores_gemma":[0.9953378,0.0005343299,0.0013788379,0.00041435283,0.0016655251,0.0006691797],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.002244643,0.00019270489,0.00038689384,0.0005747483,0.00045893382,0.000023429628,0.0001448039,0.00008177573,0.00029714764],"category_scores_gemma":[0.0037465007,0.00016837852,0.000034932502,0.0014358265,0.00012708851,0.0011145229,0.00009537059,0.000362575,0.000027874366],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008681648,0.00015133906,0.9422586,0.0023074006,0.000032442204,4.253255e-7,0.005021293,0.0007419596,0.0000012703473,0.0023977456,0.04485051,0.0021502108],"study_design_scores_gemma":[0.00081011106,0.00030410322,0.42258498,0.0002830654,0.000016847058,9.614033e-7,0.002866277,0.0037921702,0.000015349786,0.00019571184,0.56892616,0.00020425164],"about_ca_topic_score_codex":0.5785727,"about_ca_topic_score_gemma":0.04896981,"teacher_disagreement_score":0.5296029,"about_ca_system_score_codex":0.00066049903,"about_ca_system_score_gemma":0.003367538,"threshold_uncertainty_score":0.968384},"labels":[],"label_agreement":null},{"id":"W2333333711","doi":"10.3201/eid2205.151584","title":"Expansion of Shiga Toxin–Producing<i>Escherichia coli</i>by Use of Bovine Antibiotic Growth Promoters","year":2016,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Escherichia coli research studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":19,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"National Key Research and Development Program of China; Korea National Institute of Health; Natural Sciences and Engineering Research Council of Canada; National Institutes of Health; University of Alberta","keywords":"Escherichia coli; Microbiology; Antibiotics; Promoter; Shiga toxin; Biology; Escherichia coli Proteins; Toxin; Virology; Genetics; Gene","score_opus":0.00993323480380814,"score_gpt":0.24860270195115614,"score_spread":0.238669467147348,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2333333711","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.997357,0.0009907491,0.0007381749,0.00020082404,0.00012955569,0.0003005055,0.00012481597,0.00003986718,0.000118472206],"genre_scores_gemma":[0.9982383,0.001034453,0.0001626354,0.000092229326,0.00009330914,0.000018371167,0.000029916993,0.000036538968,0.00029420445],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9985489,0.00012718634,0.00031160467,0.00043282038,0.0002558482,0.00032363887],"domain_scores_gemma":[0.9988366,0.000062506035,0.00018886788,0.00043549307,0.00035175955,0.00012478733],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013320982,0.0002100222,0.00028419256,0.00007850377,0.0000866632,0.000013424223,0.0001574291,0.000074780495,0.000020791605],"category_scores_gemma":[0.001528574,0.00015929353,0.00012928102,0.00028319747,0.00026351755,0.000020385647,0.00020967721,0.000058370133,0.0000024769063],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000121331126,0.00025313563,0.18902978,0.0001654966,0.00014222352,0.0000015584855,0.00004178985,0.0000075713338,0.8038391,0.000017965162,0.005569582,0.00081045664],"study_design_scores_gemma":[0.0011454142,0.0013768292,0.11732245,0.00023753835,0.00009814926,0.000001966608,0.00003553783,0.00002281069,0.8763506,0.00004185584,0.0030001001,0.00036674403],"about_ca_topic_score_codex":0.00017115344,"about_ca_topic_score_gemma":0.000023490575,"teacher_disagreement_score":0.072511494,"about_ca_system_score_codex":0.000024579027,"about_ca_system_score_gemma":0.00013271697,"threshold_uncertainty_score":0.6495802},"labels":[],"label_agreement":null},{"id":"W2337613275","doi":"10.3201/eid2205.151875","title":"Spectrum of Viral Pathogens in Blood of Malaria-Free Ill Travelers Returning to Canada","year":2016,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Travel-related health issues","field":"Medicine","cited_by":9,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"McMaster University; Public Health Ontario; University of Toronto; Toronto Public Health","funders":"University of Toronto","keywords":"Chikungunya; Dengue fever; Virology; Malaria; Virus; Dengue virus; Biology; Herpes simplex virus; Alphavirus infection; Medicine; Immunology","score_opus":0.006330274138265891,"score_gpt":0.23984050351294248,"score_spread":0.23351022937467658,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2337613275","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99488294,0.00044423577,0.000051843308,0.002903643,0.00029304269,0.00038777158,0.0001556371,0.000067785666,0.0008131238],"genre_scores_gemma":[0.99916303,0.00008938455,0.000106888336,0.000300723,0.00010508011,0.000017343555,0.000006821499,0.00003766891,0.00017307924],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9982902,0.000067879206,0.0005662865,0.00028491684,0.0003599442,0.0004307749],"domain_scores_gemma":[0.99882364,0.00013219718,0.00018149574,0.00043704864,0.000113011985,0.00031262494],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012952495,0.000185713,0.00047106348,0.00031684674,0.000043923486,0.000002818505,0.00012246607,0.000066217974,0.00020650776],"category_scores_gemma":[0.0009121329,0.0001509255,0.00009019548,0.00039528724,0.0000576165,0.000044500925,0.000052210667,0.00014480081,0.0000032381731],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00019876976,0.0002908,0.9741096,0.00037687627,0.00014023283,0.00018336067,0.0006217479,0.00011718273,0.02113096,0.00039560968,0.00063941895,0.0017954686],"study_design_scores_gemma":[0.0033286486,0.0005333687,0.9796013,0.0010011024,0.0002389038,0.000034140947,0.00016715475,0.000016454958,0.014117509,0.00025904586,0.00049525575,0.0002071123],"about_ca_topic_score_codex":0.17666511,"about_ca_topic_score_gemma":0.23940887,"teacher_disagreement_score":0.06274375,"about_ca_system_score_codex":0.00022784962,"about_ca_system_score_gemma":0.0007056083,"threshold_uncertainty_score":0.82881755},"labels":[],"label_agreement":null},{"id":"W2398689018","doi":"10.3201/eid2207.151583","title":"Clinical Manifestations of Senecavirus A Infection in Neonatal Pigs, Brazil, 2015","year":2016,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Viral gastroenteritis research and epidemiology","field":"Medicine","cited_by":116,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canadian Science Centre for Human and Animal Health","funders":"Division of Graduate Education; Universidade Estadual de Londrina; Fundacion Araucaria","keywords":"Disease; Medicine; Neonatal infection; Pathology; Biology; Pregnancy","score_opus":0.02530686212096831,"score_gpt":0.3976579067651115,"score_spread":0.37235104464414315,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2398689018","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99519044,0.0003888734,0.0024008031,0.0010007544,0.0002662877,0.00023452647,0.000059379232,0.00009499187,0.00036393176],"genre_scores_gemma":[0.99764585,0.001576871,0.00008830402,0.00022987844,0.00020067587,0.00004086834,0.00002553261,0.000017746717,0.00017425783],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9984203,0.00026460332,0.0005397962,0.00026230115,0.00017319046,0.00033980986],"domain_scores_gemma":[0.9991599,0.00015214013,0.00011601371,0.00021598746,0.000109785375,0.00024620048],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003065568,0.00012179685,0.00035320883,0.0002733202,0.00004611119,0.000005298369,0.00004726468,0.00007184028,0.00029588834],"category_scores_gemma":[0.0019305178,0.000091521586,0.00018350121,0.00020360592,0.00019068655,0.00015513795,0.000054518805,0.00014757685,0.000065585664],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00020647803,0.00027322024,0.9671422,0.000057447534,0.000042648328,0.00014549667,0.000020675681,0.00001737437,0.0006429046,0.00008094457,0.0032247629,0.02814584],"study_design_scores_gemma":[0.0023895951,0.00075398065,0.99353164,0.0002696854,0.000038764545,0.00017265182,0.000011738155,0.00007626876,0.000029550796,0.0005372854,0.002108254,0.000080570346],"about_ca_topic_score_codex":0.0007644028,"about_ca_topic_score_gemma":0.0007010628,"teacher_disagreement_score":0.02806527,"about_ca_system_score_codex":0.00008772173,"about_ca_system_score_gemma":0.00011888325,"threshold_uncertainty_score":0.3732142},"labels":[],"label_agreement":null},{"id":"W2409232499","doi":"10.3201/eid2207.151897","title":"Detection and Genomic Characterization of Senecavirus A, Ohio, USA, 2015","year":2016,"lang":"en","type":"letter","venue":"Emerging infectious diseases","topic":"Animal Disease Management and Epidemiology","field":"Agricultural and Biological Sciences","cited_by":38,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Biology; Virology; Vesicular stomatitis virus; Vesicular Stomatitis; Population; Picornaviridae; Virus; Capsid; Medicine; Enterovirus","score_opus":0.014297932694612296,"score_gpt":0.22682609437764395,"score_spread":0.21252816168303165,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2409232499","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9488039,0.00035841507,0.000044703993,0.048730064,0.0004749005,0.00031129873,0.0004482048,0.00013009213,0.0006984417],"genre_scores_gemma":[0.9354635,0.00088985026,0.0000013653482,0.05691775,0.004625463,0.000058704463,0.0007022731,0.000006690134,0.0013343885],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99859494,0.00017664589,0.00031892798,0.00043131728,0.00014729465,0.0003308715],"domain_scores_gemma":[0.99929094,0.00015505453,0.00033519455,0.00007898533,0.000060630588,0.00007917752],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009702818,0.00026535746,0.00036894478,0.00005657787,0.00017923409,0.00003288247,0.00013030897,0.0002698032,0.0008943934],"category_scores_gemma":[0.0000600952,0.00011488853,0.00016294753,0.00013607409,0.00010545326,0.0001315197,0.00011598428,0.0001835889,0.000088597044],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010242237,0.00009385041,0.22914767,0.00035961714,0.00030810706,0.00004741744,0.000025078973,0.000002528778,0.41195643,0.00007109445,0.19291978,0.164966],"study_design_scores_gemma":[0.000107320506,0.00014363053,0.54696554,0.000047383237,0.00014805283,0.000003183768,0.0000032147368,0.000024687555,0.00007963095,0.00029124663,0.45191115,0.00027493652],"about_ca_topic_score_codex":0.00022960913,"about_ca_topic_score_gemma":0.00010921788,"teacher_disagreement_score":0.4118768,"about_ca_system_score_codex":0.00004101832,"about_ca_system_score_gemma":0.000007657533,"threshold_uncertainty_score":0.97929806},"labels":[],"label_agreement":null},{"id":"W2412170401","doi":"10.3201/eid2204.141819","title":"Elevated<i>Toxoplasma gondii</i>Infection Rates for Retinas from Eye Banks, Southern Brazil","year":2016,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Toxoplasma gondii Research Studies","field":"Immunology and Microbiology","cited_by":10,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institute of Allergy and Infectious Diseases; National Institutes of Health; Universidade de São Paulo; Canadian Institute for Advanced Research","keywords":"Toxoplasma gondii; Locus (genetics); Biology; DNA sequencing; Virology; Incidence (geometry); Eye bank; DNA; Genetics; Medicine; Ophthalmology; Gene; Antibody","score_opus":0.009001776547345344,"score_gpt":0.29096045232591317,"score_spread":0.2819586757785678,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2412170401","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98949224,0.0024090165,0.0013067715,0.0010712845,0.0017047633,0.0007239702,0.0017184459,0.00094101415,0.0006325158],"genre_scores_gemma":[0.9894982,0.0005373494,0.000030742656,0.00015555571,0.00029857273,0.00046989947,0.0003095181,0.00008241291,0.00861775],"study_design_codex":"observational","study_design_gemma":"not_applicable","domain_scores_codex":[0.99755806,0.0003100868,0.00042770547,0.0007286271,0.00010001168,0.0008755307],"domain_scores_gemma":[0.9978583,0.0011084733,0.00022137196,0.00046224738,0.00025491067,0.00009472734],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.0002196403,0.0004280676,0.00047394834,0.0002618268,0.0008260077,0.000057482077,0.00022228532,0.00026074066,0.0015401163],"category_scores_gemma":[0.0014131042,0.0003136225,0.00032629355,0.00026171934,0.00040799205,0.00024483114,0.00017567849,0.00022851217,0.0021664947],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00057217095,0.00043955457,0.6812316,0.000077725585,0.001234775,0.000008622914,0.0004620016,0.000014151704,0.24825327,0.00041660236,0.04713889,0.02015061],"study_design_scores_gemma":[0.011803395,0.0012501428,0.28318462,0.00047586812,0.0006959435,0.000029214985,0.0003387455,0.000025679426,0.21409999,0.007349494,0.47897255,0.0017743565],"about_ca_topic_score_codex":0.0006695728,"about_ca_topic_score_gemma":0.00047494704,"teacher_disagreement_score":0.43183365,"about_ca_system_score_codex":0.00017616944,"about_ca_system_score_gemma":0.00011635773,"threshold_uncertainty_score":0.9999316},"labels":[],"label_agreement":null},{"id":"W2414145494","doi":"10.3201/eid2203.150977","title":"Effects of Response to 2014–2015 Ebola Outbreak on Deaths from Malaria, HIV/AIDS, and Tuberculosis, West Africa","year":2016,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Viral Infections and Outbreaks Research","field":"Medicine","cited_by":329,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institute of General Medical Sciences; University of Toronto; Yale University; National Institutes of Health; National Science Foundation","keywords":"Sierra leone; Outbreak; Malaria; Tuberculosis; Transmission (telecommunications); Ebola virus; Medicine; Environmental health; Mortality rate; Disease; Ebola Hemorrhagic Fever; Virology; Immunology; Socioeconomics; Internal medicine; Pathology","score_opus":0.007326679481573153,"score_gpt":0.2765393774476515,"score_spread":0.26921269796607833,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2414145494","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99301255,0.0011246745,0.0006172863,0.0025315343,0.00026990107,0.00067921315,0.00020628254,0.00019999176,0.001358567],"genre_scores_gemma":[0.9971754,0.00027529872,0.0000839615,0.00022815478,0.00025963777,0.00012840962,0.000013019984,0.000052884337,0.0017832527],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9980298,0.00029532102,0.00031036005,0.0005064883,0.00042042148,0.00043758584],"domain_scores_gemma":[0.9976063,0.0011354432,0.0000768769,0.00042843595,0.00017940463,0.0005735674],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00025289922,0.0002804623,0.00045769775,0.00052625744,0.00017754808,0.00003949275,0.00008800915,0.00011096947,0.00044699264],"category_scores_gemma":[0.0013519136,0.00019604828,0.00017837185,0.00034209792,0.00012361546,0.0001318047,0.00014264346,0.00015648344,0.00042053353],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0062844562,0.0021411916,0.576295,0.00038479772,0.0007476387,0.00020798306,0.0006243123,0.00002925211,0.32834938,0.0006457154,0.049045548,0.0352447],"study_design_scores_gemma":[0.0046703895,0.0029047658,0.9456652,0.0009781589,0.00049295457,0.000032466145,0.00006638783,0.000032505483,0.02362339,0.0003228535,0.02080598,0.0004049863],"about_ca_topic_score_codex":0.00053231505,"about_ca_topic_score_gemma":0.000027771235,"teacher_disagreement_score":0.36937013,"about_ca_system_score_codex":0.00014765917,"about_ca_system_score_gemma":0.00011728031,"threshold_uncertainty_score":0.79946166},"labels":[],"label_agreement":null},{"id":"W2415206148","doi":"10.3201/eid2108.140978","title":"Hospital Resource Utilization and Patient Outcomes Associated with Respiratory Viral Testing in Hospitalized Patients","year":2015,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Respiratory viral infections research","field":"Medicine","cited_by":27,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Ottawa Hospital; University of Calgary; University of Ottawa","funders":"Ottawa Hospital Research Institute; Canadian Institutes of Health Research; University of Ottawa","keywords":"Medicine; Isolation (microbiology); Odds ratio; Intensive care unit; Intensive care medicine; Emergency medicine; Odds; Infection control; Health care; Viral load; Internal medicine; Immunology; Human immunodeficiency virus (HIV); Logistic regression; Bioinformatics","score_opus":0.04055197871522422,"score_gpt":0.3196186373433843,"score_spread":0.2790666586281601,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2415206148","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9961397,0.00033894135,0.000015251134,0.00009089919,0.00011212844,0.00085713645,0.000016409833,0.0002925594,0.0021369592],"genre_scores_gemma":[0.999188,0.0000034492045,0.000021977983,0.0004923873,0.00003119171,0.00012262864,0.00004327966,0.00005404244,0.00004305184],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99789953,0.00023498129,0.0004048781,0.00042352127,0.00062969886,0.000407374],"domain_scores_gemma":[0.9985327,0.00015131196,0.00017596231,0.00027273002,0.0004950637,0.00037222117],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00020471447,0.00025962913,0.0003735348,0.00047344773,0.00017086537,0.00007503737,0.000057889207,0.00009342701,0.000015083384],"category_scores_gemma":[0.0052936845,0.00021776426,0.00005579771,0.0008699598,0.00015927009,0.00032216738,0.00009643344,0.00024794412,0.000009431085],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000101282974,0.0010380935,0.9906073,0.00002392312,0.00006714025,0.000045211596,0.00033086733,0.0001601711,0.000010742741,0.000017114378,0.0007618983,0.006836251],"study_design_scores_gemma":[0.005000011,0.003480332,0.98863775,0.00018453847,0.000065738066,0.0000023587345,0.00016792401,0.00028250023,0.000039857696,0.00006487884,0.0018101212,0.00026397433],"about_ca_topic_score_codex":0.00015200491,"about_ca_topic_score_gemma":0.000041457042,"teacher_disagreement_score":0.0065722764,"about_ca_system_score_codex":0.00044352436,"about_ca_system_score_gemma":0.00021601423,"threshold_uncertainty_score":0.8880169},"labels":[],"label_agreement":null},{"id":"W2416743415","doi":"10.3201/eid2207.151789","title":"Red Fox as Sentinel for<i>Blastomyces dermatitidis</i>, Ontario, Canada","year":2016,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Fungal Infections and Studies","field":"Medicine","cited_by":10,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of Guelph","funders":"Canadian Wildlife Health Cooperative; Parks Canada; University of Guelph","keywords":"Blastomyces dermatitidis; Blastomyces; Fungus; Biology; Blastomycosis; Microbiology; Immunology; Botany","score_opus":0.007036260010965012,"score_gpt":0.23839595928035265,"score_spread":0.23135969926938763,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2416743415","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.96658397,0.00053688267,0.0004631466,0.0038606208,0.0009506592,0.00045594026,0.000065232074,0.00028651665,0.026797023],"genre_scores_gemma":[0.9926224,0.00006814166,0.000024960784,0.00088823127,0.00022032582,0.00016178086,0.000020087882,0.000022756429,0.0059713507],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9989164,0.000020122534,0.00024802436,0.0002655881,0.00021009987,0.00033978332],"domain_scores_gemma":[0.9991574,0.0001757571,0.00008220145,0.00022393186,0.00019622847,0.00016447839],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000042257085,0.0001993652,0.00028873674,0.0000945534,0.0003821138,0.00002164362,0.00004443063,0.000036694288,0.0005866379],"category_scores_gemma":[0.00031600555,0.00014022761,0.00016792677,0.00013865303,0.000055729506,0.00011034646,0.000029618235,0.000067878,0.000017291466],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007728246,0.00018780974,0.8400664,0.00012317688,0.0003455055,0.000035438672,0.00011454446,0.000017740667,0.0007886028,0.00030809426,0.15534794,0.0025874919],"study_design_scores_gemma":[0.0029440203,0.00024053473,0.6338743,0.00029138286,0.00046481265,0.00013190538,0.000113064474,0.000033860164,0.0010442666,0.0007160119,0.35974824,0.00039758356],"about_ca_topic_score_codex":0.5865518,"about_ca_topic_score_gemma":0.8110376,"teacher_disagreement_score":0.2244858,"about_ca_system_score_codex":0.0004614606,"about_ca_system_score_gemma":0.00074457476,"threshold_uncertainty_score":0.64232737},"labels":[],"label_agreement":null},{"id":"W2417359181","doi":"10.3201/eid2201.151053","title":"Highly Pathogenic Avian Influenza Virus, Midwestern United States","year":2015,"lang":"en","type":"letter","venue":"Emerging infectious diseases","topic":"Influenza Virus Research Studies","field":"Medicine","cited_by":10,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"National Health and Medical Research Council; Medical Research Council","keywords":"Biosecurity; Influenza A virus subtype H5N1; Outbreak; Waterfowl; Highly pathogenic; Transmission (telecommunications); Airborne transmission; Agriculture; Influenza A virus; Poultry farming; Biology; Veterinary medicine; Environmental health; Geography; Virology; Virus; Coronavirus disease 2019 (COVID-19); Ecology; Medicine; Disease; Infectious disease (medical specialty)","score_opus":0.049341871527416446,"score_gpt":0.34583224889255204,"score_spread":0.2964903773651356,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2417359181","genre_codex":"empirical","genre_gemma":"commentary","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"commentary","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.5284919,0.05926869,0.000098010176,0.3699813,0.005538797,0.0074620517,0.010743408,0.007870815,0.010545013],"genre_scores_gemma":[0.0064868056,0.0024093192,0.000039302595,0.9676041,0.008396966,0.00064174255,0.0075994576,0.00053809036,0.0062841857],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9940943,0.0004589529,0.00091924693,0.0010837852,0.0018748706,0.0015688026],"domain_scores_gemma":[0.9958828,0.00038798107,0.0004215632,0.0013194035,0.0013299447,0.00065827504],"candidate_categories":["metaepi_narrow","research_integrity","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00032534174,0.0010936748,0.0013621548,0.0017307986,0.0004814786,0.00020237356,0.0004184377,0.000754466,0.0004349245],"category_scores_gemma":[0.0013142887,0.0009860954,0.00060748745,0.001226364,0.00049315277,0.00025393593,0.00046115258,0.0027340057,0.0012490688],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00019618991,0.00026445443,0.06678283,0.0012567705,0.001390483,0.0024677822,0.00044882298,0.000190245,0.000063572494,0.0000046993614,0.9260526,0.0008815531],"study_design_scores_gemma":[0.0024843616,0.00054396957,0.00788987,0.0006525685,0.0012112604,0.00009273286,0.000065088345,0.00009410446,0.000038202652,0.000304171,0.98565817,0.0009654977],"about_ca_topic_score_codex":0.0022542742,"about_ca_topic_score_gemma":0.00010711435,"teacher_disagreement_score":0.5976229,"about_ca_system_score_codex":0.00091399066,"about_ca_system_score_gemma":0.0007965454,"threshold_uncertainty_score":0.99956673},"labels":[],"label_agreement":null},{"id":"W2417423639","doi":"10.3201/eid2203.151545","title":"Encephalitis, Ontario, Canada, 2002–2013","year":2016,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Mosquito-borne diseases and control","field":"Medicine","cited_by":30,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Public Health Ontario; University of Toronto","funders":"Yale School of Public Health, Yale University; Yale University","keywords":"Encephalitis; Incidence (geometry); Epidemiology; Medicine; Pediatrics; Population; Japanese encephalitis; Demography; Viral encephalitis; Tick-borne encephalitis; Virology; Internal medicine; Environmental health; Virus","score_opus":0.004572994327456553,"score_gpt":0.2177888932391441,"score_spread":0.21321589891168755,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2417423639","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97584486,0.00343755,0.00030759964,0.004213993,0.0010887657,0.0004982812,0.00019350059,0.00032933272,0.01408614],"genre_scores_gemma":[0.97874516,0.000114825205,0.0000072222815,0.0016528692,0.00043559776,0.0000931992,0.000022592772,0.00003247344,0.01889604],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99844915,0.000037154983,0.00026414872,0.0003829917,0.000390476,0.00047608302],"domain_scores_gemma":[0.99872,0.00007800609,0.00008342726,0.00042448752,0.00013565927,0.00055844034],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.000041817497,0.00022807317,0.0003087768,0.000076660755,0.0001605277,0.000025856594,0.00009528761,0.000045481593,0.014667356],"category_scores_gemma":[0.00013904698,0.0001614817,0.00018496816,0.00012843274,0.000058478716,0.000119062825,0.000038855298,0.00008520128,0.00012623043],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010593842,0.00024394956,0.7511342,0.00005078832,0.00019147758,0.00021298173,0.000042618525,0.000010087798,0.00029457657,0.00051457214,0.22732496,0.019873828],"study_design_scores_gemma":[0.0025328638,0.00015213032,0.68431103,0.00018711721,0.000391041,0.00004814104,0.000040898154,0.000024103434,0.00006934789,0.00018161694,0.3117478,0.0003139143],"about_ca_topic_score_codex":0.8964015,"about_ca_topic_score_gemma":0.9361187,"teacher_disagreement_score":0.08442283,"about_ca_system_score_codex":0.00057992275,"about_ca_system_score_gemma":0.0016720779,"threshold_uncertainty_score":0.98623335},"labels":[],"label_agreement":null},{"id":"W2419277580","doi":"10.3201/eid2107.150213","title":"Slow Clearance of<i>Plasmodium falciparum</i>in Severe Pediatric Malaria, Uganda, 2011–2013","year":2015,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Malaria Research and Control","field":"Medicine","cited_by":55,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Canadian Institutes of Health Research","keywords":"Plasmodium falciparum; Malaria; Artemisinin; Artesunate; Biology; Nonsynonymous substitution; Virology; Severe Malaria; Medicine; Immunology; Genetics; Gene","score_opus":0.012829270737730485,"score_gpt":0.26601857859146816,"score_spread":0.25318930785373767,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2419277580","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9823122,0.0049349046,0.00023122418,0.0029772548,0.0005550876,0.0007616361,0.00006072192,0.00019330012,0.007973682],"genre_scores_gemma":[0.99722135,0.00041004238,0.000050774455,0.00020185682,0.00047775992,0.00008542983,0.000025793597,0.000036907368,0.0014900734],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9980038,0.00012829546,0.00038312227,0.00035800657,0.00057784043,0.00054896186],"domain_scores_gemma":[0.9985372,0.00009874133,0.0001215894,0.00040736297,0.0002676049,0.00056753185],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002968648,0.0002207453,0.00047375416,0.0003790933,0.00006569581,0.000027351245,0.00014519255,0.000102967395,0.00053435704],"category_scores_gemma":[0.0005052754,0.00020513835,0.00018131467,0.0004224587,0.00006782748,0.00018725428,0.00007435021,0.0002958898,0.00029783658],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0011055855,0.0007386929,0.95952713,0.00030960658,0.00009412948,0.00014062725,0.000145232,0.0010300433,0.00008864359,0.0005606466,0.03446354,0.0017961067],"study_design_scores_gemma":[0.011157827,0.0008857144,0.9770072,0.00010130865,0.00032798346,0.00008244788,0.00012538627,0.0026833862,0.00009697513,0.0008845378,0.006230827,0.00041640323],"about_ca_topic_score_codex":0.0009910258,"about_ca_topic_score_gemma":0.000111591435,"teacher_disagreement_score":0.028232712,"about_ca_system_score_codex":0.00010540525,"about_ca_system_score_gemma":0.0004727009,"threshold_uncertainty_score":0.8365299},"labels":[],"label_agreement":null},{"id":"W2431730177","doi":"10.3201/eid2107.140788","title":"Determination of Predominance of Influenza Virus Strains in the Americas","year":2015,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Influenza Virus Research Studies","field":"Medicine","cited_by":9,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Bell (Canada)","funders":"","keywords":"Influenza season; Virology; Preparedness; Virus; Influenza A virus; Geography; Biology; Veterinary medicine; Medicine; Influenza vaccine; Political science","score_opus":0.07230831690747196,"score_gpt":0.39964811414417756,"score_spread":0.3273397972367056,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2431730177","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9946708,0.001356871,0.00014595821,0.00009351639,0.00005587969,0.0004213868,0.00003545881,0.000031692503,0.0031884178],"genre_scores_gemma":[0.99940366,0.000109783985,0.000105869534,0.0002238472,0.000052253705,0.00006792688,0.000003765313,0.000011682777,0.00002119958],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99870515,0.00012577705,0.0003481617,0.00014636033,0.00046801646,0.00020653997],"domain_scores_gemma":[0.9990463,0.00014147897,0.00017282255,0.00027785826,0.0002895582,0.00007193508],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00030203088,0.00011544262,0.00029441778,0.0002240396,0.000041755695,0.0000067814285,0.00010974867,0.000030911207,0.000016205951],"category_scores_gemma":[0.0019508268,0.000084614985,0.00008816208,0.0005245692,0.00027357743,0.00011377937,0.000052440417,0.000118115684,0.0000056964273],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003565521,0.0010500109,0.96172327,0.00040503102,0.000079497404,0.00004229723,0.0063839126,0.000463108,0.002489745,0.00027877055,0.0008710727,0.025856718],"study_design_scores_gemma":[0.0036388664,0.0013810454,0.9837412,0.0002821446,0.00016293605,0.000019200075,0.0018218383,0.0007459403,0.0033685646,0.000631817,0.0040231734,0.00018327817],"about_ca_topic_score_codex":0.00048635103,"about_ca_topic_score_gemma":0.00008593766,"teacher_disagreement_score":0.02567344,"about_ca_system_score_codex":0.000080715734,"about_ca_system_score_gemma":0.00017794006,"threshold_uncertainty_score":0.34504992},"labels":[],"label_agreement":null},{"id":"W2440774697","doi":"10.3201/eid2207.160184","title":"Two Related Occupational Cases of<i>Legionella longbeachae</i>Infection, Quebec, Canada","year":2016,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Legionella and Acanthamoeba research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":9,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Santé Montérégie; Institut de recherche Robert-Sauvé en santé et en sécurité du travail; Centre intégré de santé et de services sociaux de la Montérégie-Centre; Université de Sherbrooke","funders":"Institut National de Santé Publique du Québec","keywords":"Legionella; Medicine; Legionnaires' disease; Occupational exposure; Microbiology; Cross infection; Environmental health; Biology; Intensive care medicine; Legionella pneumophila; Bacteria","score_opus":0.008104201988214361,"score_gpt":0.2620760888993911,"score_spread":0.2539718869111767,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2440774697","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.996959,0.0006501062,0.00036283032,0.00034791353,0.0004316941,0.00014477399,0.00008115059,0.000040867773,0.0009816943],"genre_scores_gemma":[0.9969215,0.00028080543,0.000006226575,0.00012283349,0.00028545162,0.00002627231,0.000114001436,0.000026702784,0.002216248],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9987103,0.00008742898,0.00027783934,0.00034451357,0.00028076748,0.0002991549],"domain_scores_gemma":[0.99909943,0.00007019878,0.0001246089,0.0003091285,0.00023064268,0.00016599105],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00007703998,0.00017716891,0.00016203203,0.00008578466,0.00017019635,0.000014519702,0.00011340433,0.00006721078,0.0001274567],"category_scores_gemma":[0.0002964041,0.0001376548,0.00012582974,0.00019428051,0.00014816914,0.000012248952,0.00008668654,0.00006083279,0.000011515114],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010855736,0.0001617587,0.91956365,0.000039707003,0.00018646581,0.000039684535,0.000015710017,0.00030913437,0.034410372,0.00045245388,0.042314723,0.002397805],"study_design_scores_gemma":[0.0059582167,0.0005139514,0.7120182,0.00024653648,0.00022108985,0.0003509364,0.00008381896,0.00007193161,0.116913214,0.00070258405,0.16148219,0.0014373399],"about_ca_topic_score_codex":0.41182733,"about_ca_topic_score_gemma":0.60277903,"teacher_disagreement_score":0.20754543,"about_ca_system_score_codex":0.00009596459,"about_ca_system_score_gemma":0.00096608704,"threshold_uncertainty_score":0.59208935},"labels":[],"label_agreement":null},{"id":"W2461665134","doi":"10.3201/eid2208.151986","title":"Lyssavirus in Indian Flying Foxes, Sri Lanka","year":2016,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Rabies epidemiology and control","field":"Immunology and Microbiology","cited_by":94,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Faculty of Veterinary Medicine and Animal Science, Poznań University of Life Sciences; European Commission; University of Peradeniya; International Development Research Centre; Scottish Government","keywords":"Lyssavirus; Sri lanka; Biology; Phylogenetic tree; Rabies; Virology; Phylogenetics; Zoology; Geography; Rabies virus; Rhabdoviridae; Genetics; Gene","score_opus":0.007440162430807,"score_gpt":0.2439359077027674,"score_spread":0.2364957452719604,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2461665134","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99015266,0.004024348,0.00022363124,0.00091773475,0.0011479157,0.00019705149,0.00004714325,0.00030065508,0.002988845],"genre_scores_gemma":[0.9980715,0.00027220687,0.0000027827962,0.0006424351,0.0000841905,0.00007579198,0.000024410294,0.000015182468,0.0008115248],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.998371,0.00037963327,0.0003365019,0.00035108745,0.000028711944,0.00053305156],"domain_scores_gemma":[0.9990184,0.0005082169,0.00011304479,0.0002846636,0.000031440013,0.000044244887],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00024798556,0.00019982514,0.0003532128,0.00022388033,0.00026425347,0.000008167616,0.00016869325,0.00023966325,0.001157218],"category_scores_gemma":[0.00068091217,0.00014466295,0.00012972008,0.00015878628,0.00019236402,0.00014665986,0.00006121777,0.00021417682,0.0010941676],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000116743206,0.00013676619,0.94390297,0.000013091595,0.00015290284,0.00003701131,0.00047683873,0.000020209309,0.010416105,0.0013276113,0.0018978067,0.04150196],"study_design_scores_gemma":[0.009542384,0.00033320012,0.8369036,0.00031935517,0.00017716749,0.0001753158,0.0005130532,0.000010110174,0.0018111384,0.0066897236,0.1424783,0.0010467005],"about_ca_topic_score_codex":0.0005163595,"about_ca_topic_score_gemma":0.00046834338,"teacher_disagreement_score":0.1405805,"about_ca_system_score_codex":0.00008036093,"about_ca_system_score_gemma":0.000059711678,"threshold_uncertainty_score":0.99975586},"labels":[],"label_agreement":null},{"id":"W2469462677","doi":"10.3201/eid2208.151627","title":"<i>Baylisascaris procyonis</i>Parasites in Raccoons, Costa Rica, 2014","year":2016,"lang":"en","type":"letter","venue":"Emerging infectious diseases","topic":"Parasitic Infections and Diagnostics","field":"Immunology and Microbiology","cited_by":15,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"Fondation Pour La Conservation Du Saumon Atlantique; Consejo Nacional de Rectores; Universidad de Costa Rica; Universidad Nacional de Costa Rica","keywords":"Zoology; Helminths; Larva migrans; Veterinary medicine; Biology; Medicine","score_opus":0.00591479431570941,"score_gpt":0.24562099068372348,"score_spread":0.23970619636801407,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2469462677","genre_codex":"commentary","genre_gemma":"commentary","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"commentary","genre_consensus":"commentary","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.16776039,0.096973605,0.0033523082,0.54824954,0.04524886,0.0084683215,0.013063355,0.006525634,0.110357955],"genre_scores_gemma":[0.39512074,0.006338493,0.0000571974,0.5544251,0.009728216,0.0024829565,0.009465434,0.0006240802,0.021757774],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99668247,0.00048266313,0.00067593425,0.00087487604,0.00011622123,0.0011678686],"domain_scores_gemma":[0.9972028,0.0014446668,0.00035977672,0.00075856433,0.0001747092,0.00005944854],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00017515999,0.000699232,0.00085941475,0.000771731,0.00044139128,0.00008546447,0.00035751358,0.0012303484,0.0029870751],"category_scores_gemma":[0.00072503206,0.0006070886,0.00037886243,0.00035156024,0.00036809873,0.00020108803,0.00015247778,0.001598306,0.0050681895],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000021895097,0.00014772586,0.19280852,0.0000934149,0.0002516323,0.00017896992,0.000043042906,0.000015490032,0.00019580484,0.00007163209,0.8045375,0.0016344085],"study_design_scores_gemma":[0.001683937,0.00013169163,0.015862253,0.00031878718,0.00035839857,0.00015794505,0.000015449423,0.0000014105347,0.00032035934,0.00078170956,0.97952485,0.00084319466],"about_ca_topic_score_codex":0.00062957045,"about_ca_topic_score_gemma":0.00008709516,"teacher_disagreement_score":0.22736034,"about_ca_system_score_codex":0.0003040349,"about_ca_system_score_gemma":0.0003032725,"threshold_uncertainty_score":0.999638},"labels":[],"label_agreement":null},{"id":"W2480701872","doi":"10.3201/eid2209.151695","title":"Multidrug-Resistant<i>Campylobacter coli</i>in Men Who Have Sex with Men, Quebec, Canada, 2015","year":2016,"lang":"en","type":"letter","venue":"Emerging infectious diseases","topic":"Salmonella and Campylobacter epidemiology","field":"Agricultural and Biological Sciences","cited_by":18,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"National Health and Medical Research Council; Medical Research Council; Université de Montréal","keywords":"Men who have sex with men; Campylobacter; Outbreak; Multiple drug resistance; Medicine; Virology; Biology; Demography; Microbiology; Drug resistance; Human immunodeficiency virus (HIV); Genetics; Bacteria","score_opus":0.00745725472226593,"score_gpt":0.21516190928878348,"score_spread":0.20770465456651754,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2480701872","genre_codex":"commentary","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"commentary","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.4673929,0.0015522317,0.000003862097,0.49662066,0.0005010043,0.001439553,0.0021003135,0.0004611897,0.029928284],"genre_scores_gemma":[0.4434973,0.0005598706,0.000004522048,0.41746867,0.014145475,0.00069789204,0.002723722,0.000060657418,0.12084189],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99573284,0.00059678295,0.00065346627,0.0011482906,0.00055772974,0.0013109121],"domain_scores_gemma":[0.9979248,0.00092165347,0.00042553458,0.00029051083,0.00014403308,0.000293488],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00019127483,0.0007963411,0.0010459252,0.0000706393,0.0002897522,0.00010623431,0.0005327183,0.0005613496,0.00081467035],"category_scores_gemma":[0.000100268124,0.0003136129,0.00020822311,0.0002862664,0.00019879288,0.00017268727,0.00013547397,0.00075738085,0.000044905915],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000059939666,0.000042782696,0.14842342,0.00004501516,0.00012170293,0.0003778092,0.000028302653,0.000011833211,0.0005025935,0.000002459324,0.84891933,0.0014648266],"study_design_scores_gemma":[0.00043721098,0.00010367821,0.2906743,0.00017762632,0.00009926356,0.000014067578,0.00010830286,0.000026964462,0.00003093307,0.000057314483,0.707487,0.00078337605],"about_ca_topic_score_codex":0.77568,"about_ca_topic_score_gemma":0.9465666,"teacher_disagreement_score":0.17088656,"about_ca_system_score_codex":0.0006417647,"about_ca_system_score_gemma":0.0002826386,"threshold_uncertainty_score":0.9999316},"labels":[],"label_agreement":null},{"id":"W2493782689","doi":"10.3201/eid2209.160354","title":"Ebola Virus Disease, Democratic Republic of the Congo, 2014","year":2016,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Viral Infections and Outbreaks Research","field":"Medicine","cited_by":50,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Public Health Agency of Canada","funders":"","keywords":"Medicine; Case fatality rate; Outbreak; Ebola virus; Diarrhea; Internal medicine; Disease; Mortality rate; Retrospective cohort study; Anorexia; Bloody; Bloody diarrhea; Intensive care medicine; Virology; Epidemiology; Surgery","score_opus":0.011622313080886288,"score_gpt":0.2881436692990763,"score_spread":0.27652135621819,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2493782689","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98893356,0.00094106485,0.00058107224,0.002648025,0.0004945724,0.0005371053,0.00009022396,0.00022087434,0.0055534905],"genre_scores_gemma":[0.9941091,0.00023326662,0.0000053741855,0.00032471743,0.00022309518,0.00006971252,0.0000061304186,0.00003060144,0.00499803],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9985421,0.00013539412,0.00030683237,0.0002815336,0.00040174744,0.00033242925],"domain_scores_gemma":[0.9985508,0.00015841905,0.00011831297,0.0005901519,0.00024294139,0.0003394063],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00014235605,0.00016849392,0.0002579929,0.00018612479,0.00025994694,0.000026086333,0.00012446061,0.000046974605,0.001216296],"category_scores_gemma":[0.0008533468,0.000088611836,0.00031695358,0.00041516524,0.00027363814,0.00015886994,0.000121238605,0.000121654724,0.00010375767],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014950045,0.00070926873,0.9046688,0.00020926625,0.00022657566,0.000019978423,0.000031644948,0.000020523901,0.02525079,0.0015166904,0.051026233,0.01617074],"study_design_scores_gemma":[0.0017566035,0.00026873377,0.97280186,0.0003463384,0.00032649326,0.000037032998,0.000015648458,0.00015753272,0.0045776335,0.0019168385,0.017580858,0.0002144373],"about_ca_topic_score_codex":0.0001755848,"about_ca_topic_score_gemma":0.000040204257,"teacher_disagreement_score":0.06813306,"about_ca_system_score_codex":0.00010034966,"about_ca_system_score_gemma":0.00028634464,"threshold_uncertainty_score":0.99969673},"labels":[],"label_agreement":null},{"id":"W2503156707","doi":"10.3201/eid2209.160177","title":"<i>mcr-1</i>–Positive Colistin-Resistant<i>Escherichia coli</i>in Traveler Returning to Canada from China","year":2016,"lang":"en","type":"letter","venue":"Emerging infectious diseases","topic":"Antibiotic Resistance in Bacteria","field":"Biochemistry, Genetics and Molecular Biology","cited_by":45,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of British Columbia; BC Centre for Disease Control; Providence Health Care","funders":"British Columbia Centre for Disease Control; Providence Health Care; Public Health Agency; Public Health Agency of Canada","keywords":"MCR-1; Colistin; Escherichia coli Proteins; Escherichia coli; China; Microbiology; Enterobacteriaceae Infections; Traveler's diarrhea; Medicine; Biology; Environmental health; Geography; Antibiotics; Enterobacteriaceae; Genetics; Internal medicine; Gene; Diarrhea","score_opus":0.004101568195297039,"score_gpt":0.2143331030980457,"score_spread":0.21023153490274868,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2503156707","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.95506567,0.00083852647,0.00036760652,0.03519538,0.0017656523,0.00070866296,0.0034123035,0.00007122244,0.002574948],"genre_scores_gemma":[0.83802474,0.00015278129,0.00010560677,0.14755318,0.0071954997,0.00010121305,0.0026895616,0.00024767593,0.0039297375],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9966294,0.00027044574,0.00057968777,0.0011717696,0.0004458053,0.00090286264],"domain_scores_gemma":[0.9984242,0.00010750961,0.00032607288,0.0007691264,0.000134493,0.0002386471],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.000090677095,0.0006997337,0.0006540894,0.00012518858,0.00020357108,0.00010499968,0.00048255306,0.0005473515,0.00019358347],"category_scores_gemma":[0.0003254995,0.0006773827,0.00020789733,0.00024150667,0.00011213312,0.00000801082,0.00018761739,0.0006100199,0.000018298979],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002575747,0.000048778056,0.04671981,0.00012099265,0.00030633507,0.0005407264,0.0000695175,0.00003377333,0.074686676,0.000004565971,0.87684274,0.0003685359],"study_design_scores_gemma":[0.00082433183,0.00016136747,0.2574996,0.00070595846,0.00016461045,0.000005626601,0.000030367084,0.0000047801527,0.0055825785,0.000060968698,0.7336667,0.0012931119],"about_ca_topic_score_codex":0.16429324,"about_ca_topic_score_gemma":0.23515393,"teacher_disagreement_score":0.21077979,"about_ca_system_score_codex":0.00041035458,"about_ca_system_score_gemma":0.0011057522,"threshold_uncertainty_score":0.99956775},"labels":[],"label_agreement":null},{"id":"W2520522612","doi":"10.3201/eid2301.161274","title":"Reconstruction of Zika Virus Introduction in Brazil","year":2016,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Mosquito-borne diseases and control","field":"Medicine","cited_by":40,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"U.S. National Library of Medicine; National Institute of Environmental Health Sciences; Canadian Institutes of Health Research","keywords":"Zika virus; Geography; Virology; Virus; Biology","score_opus":0.0043643230940037855,"score_gpt":0.25144298375053553,"score_spread":0.24707866065653175,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2520522612","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9949395,0.0009477309,0.0004159481,0.0016195643,0.0007180516,0.00027955713,0.00003277027,0.00013686447,0.0009100105],"genre_scores_gemma":[0.9983939,0.00028356328,0.00001681841,0.00013019002,0.0008170095,0.000048414564,0.000011126195,0.000020943695,0.0002780314],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9988987,0.00005355089,0.0003384626,0.00030348904,0.0001841892,0.00022163939],"domain_scores_gemma":[0.9992756,0.000048760336,0.0001302465,0.00029696815,0.000111812034,0.00013660078],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00008226998,0.00014024631,0.0003001332,0.00026445725,0.000048018916,0.000008665562,0.000044388267,0.000052501375,0.0010175265],"category_scores_gemma":[0.00034446726,0.000105134146,0.00016199482,0.00028420956,0.00008867906,0.0001781114,0.00002090628,0.00006507056,0.00003384202],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00045842564,0.0005020657,0.7019442,0.00011944663,0.000095475865,0.000014343669,0.000040946717,0.000033335265,0.028316882,0.0007388482,0.0024259067,0.26531017],"study_design_scores_gemma":[0.006566877,0.0005036345,0.97433764,0.0004431346,0.00043776832,0.000119027194,0.000110589834,0.00021462186,0.006007223,0.0018573216,0.009065631,0.00033650495],"about_ca_topic_score_codex":0.00016125148,"about_ca_topic_score_gemma":0.000069496,"teacher_disagreement_score":0.27239352,"about_ca_system_score_codex":0.00011426339,"about_ca_system_score_gemma":0.00009637736,"threshold_uncertainty_score":0.9998957},"labels":[],"label_agreement":null},{"id":"W2587559239","doi":"10.3201/eid2304.161866","title":"Highly Pathogenic Avian Influenza A(H5N8) Virus in Wild Migratory Birds, Qinghai Lake, China","year":2017,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Influenza Virus Research Studies","field":"Medicine","cited_by":119,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Youth Innovation Promotion Association; Canadian Institutes of Health Research; Youth Innovation Promotion Association of the Chinese Academy of Sciences; Chinese Academy of Sciences; Sanming Project of Medicine in Shenzhen; National Natural Science Foundation of China","keywords":"Reassortment; Influenza A virus subtype H5N1; Biology; Highly pathogenic; Virology; Virus; Influenza A virus; Avian influenza virus; Strain (injury); H5N1 genetic structure; China; Coronavirus disease 2019 (COVID-19); Geography; Infectious disease (medical specialty); Medicine","score_opus":0.03023939971697374,"score_gpt":0.3419367892343736,"score_spread":0.31169738951739984,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2587559239","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9862811,0.0048588132,0.000010184268,0.0005117801,0.00052574655,0.000735252,0.000168418,0.0004971409,0.006411587],"genre_scores_gemma":[0.9966918,0.00082665373,0.000031016654,0.0011071068,0.00055360346,0.0002088126,0.000023417582,0.00009886153,0.00045872785],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9969055,0.00014788916,0.0005710067,0.00068109186,0.0007256,0.0009689082],"domain_scores_gemma":[0.9975941,0.00010370263,0.00028753665,0.0013387,0.00019165012,0.00048427968],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00034449864,0.00047619743,0.00069290795,0.00061479607,0.001247047,0.0002055274,0.0004018865,0.00015355399,0.00023720799],"category_scores_gemma":[0.0019120041,0.0004435831,0.00033425543,0.00034191762,0.0004692791,0.0005271748,0.0004048449,0.0006164548,0.00031053493],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00024399448,0.0005802663,0.9851096,0.00025488387,0.0002483547,0.00042598133,0.0005395897,0.00007411007,0.0022360869,0.00012886261,0.0035408386,0.0066173887],"study_design_scores_gemma":[0.0032844734,0.00025095334,0.9598078,0.0003824054,0.00016835019,0.000029102272,0.000060104056,0.000094940384,0.0005776533,0.00034997013,0.034532454,0.0004617972],"about_ca_topic_score_codex":0.0025314249,"about_ca_topic_score_gemma":0.0058363588,"teacher_disagreement_score":0.030991616,"about_ca_system_score_codex":0.0002831385,"about_ca_system_score_gemma":0.00033806346,"threshold_uncertainty_score":0.9998016},"labels":[],"label_agreement":null},{"id":"W2605394135","doi":"10.3201/eid2305.161838","title":"Survey of Treponemal Infections in Free-Ranging and Captive Macaques, 1999–2012","year":2017,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Syphilis Diagnosis and Treatment","field":"Medicine","cited_by":10,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"The Scarborough Hospital; University of Toronto","funders":"National Institute of Allergy and Infectious Diseases; National Institute for Health and Care Research; National Center for Research Resources; Wellcome Trust","keywords":"Nonhuman primate; Southeast asia; Virology; Biology; Medicine; Veterinary medicine; Ethnology","score_opus":0.022576825711616105,"score_gpt":0.30712138950802503,"score_spread":0.2845445637964089,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2605394135","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99069226,0.006052974,0.000027861919,0.00035967736,0.0002712355,0.00027811516,0.00011880184,0.00006370845,0.0021353576],"genre_scores_gemma":[0.99898696,0.00066623033,0.000015092338,0.00004277804,0.000077367054,0.00006358135,0.000035411344,0.000020343114,0.00009221523],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99909353,0.00007033748,0.00022951253,0.0002429055,0.00014560374,0.00021811118],"domain_scores_gemma":[0.9989316,0.00018496824,0.00015517542,0.0004959006,0.00009266498,0.00013971998],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015681687,0.00015267468,0.00033145607,0.00021866513,0.00023756172,0.000039218987,0.00006448903,0.00005332171,0.000112189526],"category_scores_gemma":[0.00083660975,0.00014139384,0.00008619328,0.00012354583,0.00015049797,0.00021486009,0.0000690958,0.000094033014,0.0000051016677],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000027978484,0.0009099652,0.9925242,0.000062085855,0.0001252803,0.000049227954,0.00014407763,0.00003142003,0.000035448626,0.00011426462,0.0009154856,0.005060563],"study_design_scores_gemma":[0.0021349508,0.00018945304,0.99637604,0.00021685155,0.00017364352,0.000036048965,0.000033148062,0.00013923684,0.00014133813,0.00015526371,0.0002842688,0.00011973508],"about_ca_topic_score_codex":0.027498445,"about_ca_topic_score_gemma":0.00758993,"teacher_disagreement_score":0.019908514,"about_ca_system_score_codex":0.000079051635,"about_ca_system_score_gemma":0.00007516982,"threshold_uncertainty_score":0.9789775},"labels":[],"label_agreement":null},{"id":"W2610363069","doi":"10.3201/eid2307.161858","title":"Concurrent Infection with Hepatitis C Virus and<i>Streptococcus pneumoniae</i>","year":2017,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Pneumonia and Respiratory Infections","field":"Medicine","cited_by":17,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of Alberta; Provincial Laboratory of Public Health; Dalhousie University","funders":"Pfizer Canada; Merck Canada; Dalhousie University; Government of Canada; Eli Lilly and Company; University of Alberta; Pfizer","keywords":"Medicine; Streptococcus pneumoniae; Hepatitis C virus; Internal medicine; Population; Hepatitis C; Cohort; Immunology; Virus; Biology; Microbiology","score_opus":0.01091464660086954,"score_gpt":0.2850497352994742,"score_spread":0.27413508869860465,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2610363069","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99295133,0.00020888746,0.00025535407,0.0006297004,0.00067606784,0.0004897543,0.000037466725,0.00043402988,0.0043173917],"genre_scores_gemma":[0.99793667,0.0009168284,0.0000021374728,0.00035652553,0.00034061284,0.00017658614,0.000016243508,0.000039091312,0.00021532805],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99880385,0.00004815598,0.00021797617,0.0003882047,0.00022764411,0.0003141496],"domain_scores_gemma":[0.9987271,0.000037179005,0.00021338488,0.0005381577,0.00014045271,0.00034374936],"candidate_categories":["sts"],"consensus_categories":[],"category_scores_codex":[0.00006607359,0.0002630594,0.00032499855,0.00015912557,0.0013271038,0.00018388299,0.00006465727,0.000078331796,0.00011207724],"category_scores_gemma":[0.00016471434,0.00021307245,0.0001258848,0.000104136816,0.00031176637,0.00031746135,0.00007514148,0.00023456643,0.000051639425],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000008032532,0.00028149702,0.9821927,0.000097984346,0.00014308661,0.00006950167,0.000052713276,0.000023755505,0.0032487337,0.00019120457,0.00034484765,0.013345923],"study_design_scores_gemma":[0.0014083849,0.0006398014,0.9691348,0.0001859088,0.00037147285,0.00016549071,0.0000070457318,0.00012224576,0.00045547832,0.00006247244,0.027175533,0.00027137663],"about_ca_topic_score_codex":0.0011247923,"about_ca_topic_score_gemma":0.001172449,"teacher_disagreement_score":0.026830684,"about_ca_system_score_codex":0.00008781077,"about_ca_system_score_gemma":0.000119062766,"threshold_uncertainty_score":0.99997306},"labels":[],"label_agreement":null},{"id":"W2614016961","doi":"10.3201/eid2307.170315","title":"Outbreaks and Surveys: A Dilogy","year":2017,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Mosquito-borne diseases and control","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Toronto General Hospital","funders":"","keywords":"Outbreak; Geography; Virology; Biology; Environmental health; Medicine","score_opus":0.010252969072114385,"score_gpt":0.29163191303226943,"score_spread":0.28137894396015506,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2614016961","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98485404,0.0026004084,0.00032707237,0.0012790083,0.0004455413,0.000311298,0.00005240068,0.00022185581,0.009908387],"genre_scores_gemma":[0.9980048,0.00018700841,0.000007311922,0.0004957221,0.00042819773,0.00005272804,0.000023718023,0.000028301041,0.0007722108],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9989791,0.0000744132,0.00017001123,0.00032961776,0.00015834137,0.0002885066],"domain_scores_gemma":[0.99875134,0.000053398464,0.000120296,0.0006390299,0.00008353207,0.00035238222],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014097794,0.00017436595,0.00030979715,0.0000761159,0.00055250287,0.00013921827,0.00009979224,0.000051862975,0.00028286094],"category_scores_gemma":[0.00055284315,0.00015380791,0.00014479407,0.00003600104,0.00015162764,0.00014133091,0.00010285285,0.00009578069,0.00003846045],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006167543,0.00022160509,0.9436961,0.000087683584,0.00013862719,0.00008772603,0.000041143183,0.0000026771302,0.000099204095,0.0005919426,0.0013351949,0.05363641],"study_design_scores_gemma":[0.002162608,0.00017039411,0.9896571,0.000060796327,0.0003873037,0.000042739975,0.000031745065,0.0003468404,0.000014218179,0.00052975863,0.0064228564,0.00017366257],"about_ca_topic_score_codex":0.00058129535,"about_ca_topic_score_gemma":0.000093517694,"teacher_disagreement_score":0.053462747,"about_ca_system_score_codex":0.000025404406,"about_ca_system_score_gemma":0.00007497924,"threshold_uncertainty_score":0.62721044},"labels":[],"label_agreement":null},{"id":"W2625079437","doi":"10.3201/eid2307.161145","title":"Measles Outbreak with Unique Virus Genotyping, Ontario, Canada, 2015","year":2017,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Virology and Viral Diseases","field":"Medicine","cited_by":27,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Regional Municipality of Niagara; Public Health Ontario; University of Toronto; University of Manitoba; Public Health Agency of Canada","funders":"Ontario Ministry of Health and Long-Term Care","keywords":"Measles; Outbreak; Measles virus; Genotyping; Virology; Medicine; Epidemiology; Genotype; Public health; Morbillivirus; Virus; Environmental health; Measles vaccine; Vaccination; Biology; Genetics; Internal medicine; Pathology","score_opus":0.009612347504499836,"score_gpt":0.2618636772810383,"score_spread":0.25225132977653847,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2625079437","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98392445,0.00090409897,0.00008747914,0.0011762159,0.0003912807,0.00031974682,0.000077035336,0.00020572098,0.012913989],"genre_scores_gemma":[0.99501884,0.0000459367,0.000024866584,0.0014374123,0.00022811022,0.000052320087,0.000060773007,0.00003816893,0.003093596],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.998704,0.000044291362,0.00019156691,0.0003670917,0.00029149867,0.0004015364],"domain_scores_gemma":[0.9984756,0.000028936736,0.000177182,0.000748196,0.00013461139,0.00043547575],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00005682206,0.00026840201,0.00035026798,0.0000805046,0.0009431374,0.00006555478,0.00018124879,0.00008049673,0.0009670131],"category_scores_gemma":[0.0002032665,0.00021887932,0.00010714154,0.000048939924,0.00021876793,0.00020123603,0.000081510974,0.00023435807,0.00003306154],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00038874408,0.00025596187,0.9732371,0.00006195686,0.00029966034,0.00036677255,0.000094476396,0.00006445314,0.00012221879,0.00024688608,0.023782989,0.0010787694],"study_design_scores_gemma":[0.0013903432,0.00027147774,0.9647513,0.00011459856,0.00056350953,0.00006869904,0.00003117337,0.000031696738,0.00019728826,0.0002068076,0.03208844,0.00028465514],"about_ca_topic_score_codex":0.9286216,"about_ca_topic_score_gemma":0.98750055,"teacher_disagreement_score":0.058878947,"about_ca_system_score_codex":0.000345601,"about_ca_system_score_gemma":0.0020089252,"threshold_uncertainty_score":0.99994624},"labels":[],"label_agreement":null},{"id":"W269656299","doi":"10.3201/eid1709.110260","title":"<i>Cronobacter sakazakii</i>Sequence Type 4 in Neonatal Infections","year":2011,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Enterobacteriaceae and Cronobacter Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":158,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Trent University; Nottingham Trent University","keywords":"Cronobacter sakazakii; Neonatal meningitis; Cronobacter; Multilocus sequence typing; Microbiology; Meningitis; Biology; Typing; clone (Java method); Sequence (biology); Virology; Enterobacter; Medicine; Genotype; Genetics; Escherichia coli; Pediatrics; Bacteria; Gene","score_opus":0.021070029056576706,"score_gpt":0.282052519522194,"score_spread":0.2609824904656173,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W269656299","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9957278,0.00034315247,0.00017212784,0.000021191217,0.00035878882,0.00015819201,0.00002528747,0.000058172645,0.0031352858],"genre_scores_gemma":[0.9989187,0.00024195803,0.000030814135,0.00016449204,0.00016667195,0.000049641574,0.00012829159,0.000030230145,0.0002691863],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99888545,0.000079291065,0.00019622092,0.00036596425,0.00010156205,0.00037152943],"domain_scores_gemma":[0.999385,0.000008149018,0.000049769493,0.00034611148,0.00007647647,0.00013448468],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00006640244,0.00017751016,0.0001321104,0.00012645587,0.000102440616,0.000037384925,0.00016867743,0.00008721519,0.00043403296],"category_scores_gemma":[0.00007798642,0.0001820247,0.00009208427,0.00023293264,0.00009526794,0.000022396489,0.0001478826,0.00013061584,0.000097897915],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000878479,0.00023362726,0.96767,0.000020295332,0.000050605555,0.000018482131,0.0001855476,0.00001583495,0.02879738,0.000068307956,0.0005786527,0.0022734092],"study_design_scores_gemma":[0.0020578497,0.0014426833,0.89417684,0.00009671461,0.00006710801,0.00011726491,0.00029683666,0.00003053943,0.03532343,0.0005280988,0.06488042,0.0009821854],"about_ca_topic_score_codex":0.00029967638,"about_ca_topic_score_gemma":0.00077364326,"teacher_disagreement_score":0.073493145,"about_ca_system_score_codex":0.00003725592,"about_ca_system_score_gemma":0.000095426745,"threshold_uncertainty_score":0.7422752},"labels":[],"label_agreement":null},{"id":"W2730227941","doi":"10.3201/eid2309.162043","title":"Evaluation of 5 Commercially Available Zika Virus Immunoassays","year":2017,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Mosquito-borne diseases and control","field":"Medicine","cited_by":77,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Public Health Agency of Canada","funders":"","keywords":"Zika virus; Virology; Serology; Plaque reduction neutralization test; Medicine; Virus; Neutralization; Antibody; Immunology","score_opus":0.03203548864953858,"score_gpt":0.33118894485510747,"score_spread":0.2991534562055689,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2730227941","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.93587947,0.0062936796,0.00009276159,0.00041577598,0.00069537933,0.00075638364,0.00009179979,0.00015167703,0.055623055],"genre_scores_gemma":[0.9985134,0.00021538505,0.000011526654,0.0002228085,0.00032252644,0.00010687425,0.000047485042,0.00003229893,0.0005276731],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99812067,0.0001273209,0.00032912593,0.00029459072,0.0008506141,0.00027770738],"domain_scores_gemma":[0.997579,0.000047635986,0.00034618672,0.0010522463,0.0007786459,0.00019631237],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0006014427,0.00018946444,0.00040024763,0.000111233574,0.0005344666,0.00008522992,0.00019748088,0.000061824656,0.003075712],"category_scores_gemma":[0.0013379145,0.00017940885,0.00028608687,0.00007557424,0.00012773299,0.00021820191,0.00008989994,0.000106272244,0.00016043741],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0004909717,0.002066922,0.8067045,0.0002904717,0.0010544895,0.00003152221,0.00015320687,0.00027851114,0.008138328,0.00095081347,0.023105113,0.15673514],"study_design_scores_gemma":[0.007821992,0.00041300632,0.9656524,0.0002907284,0.0055204043,0.000013970481,0.00006894938,0.007595152,0.0011303314,0.0012481378,0.009882495,0.00036241786],"about_ca_topic_score_codex":0.001207624,"about_ca_topic_score_gemma":0.0001295467,"teacher_disagreement_score":0.1589479,"about_ca_system_score_codex":0.000118642565,"about_ca_system_score_gemma":0.0005098989,"threshold_uncertainty_score":0.99783564},"labels":[],"label_agreement":null},{"id":"W2736715209","doi":"10.3201/eid2309.161704","title":"Rabies Virus Transmission in Solid Organ Transplantation, China, 2015–2016","year":2017,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Rabies epidemiology and control","field":"Immunology and Microbiology","cited_by":17,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"Alberta Prion Research Institute; Alberta Livestock and Meat Agency; University of Alberta; Genome Canada","keywords":"Rabies; Rabies virus; Transmission (telecommunications); Transplantation; Virology; Organ transplantation; Virus; Medicine; Rhabdoviridae; Biology; Immunology; Internal medicine","score_opus":0.006419439380099509,"score_gpt":0.27659763070480536,"score_spread":0.27017819132470583,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2736715209","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.981677,0.008191656,0.0020848482,0.0023371822,0.001415587,0.0003261964,0.00008338679,0.00027007662,0.0036140736],"genre_scores_gemma":[0.99602175,0.0021882069,0.000006707917,0.00021359697,0.00007599414,0.000059534326,0.00009338194,0.000021603177,0.0013192288],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9984486,0.00030400237,0.00037170583,0.0003591741,0.000032259806,0.0004842771],"domain_scores_gemma":[0.99911994,0.00015808298,0.00020018,0.00043373898,0.000038301325,0.000049750754],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00025777947,0.00023555326,0.00040695057,0.00014753785,0.0011458896,0.000033790217,0.00030919304,0.00022923552,0.0010494736],"category_scores_gemma":[0.00028846558,0.00020387891,0.00014724182,0.00005445316,0.00032630944,0.00028787862,0.000031364867,0.00028776767,0.00031606865],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0009771088,0.00076197,0.8421696,0.00015807286,0.000530268,0.00010041292,0.0021185933,0.0007352375,0.09237598,0.001600801,0.01631183,0.04216013],"study_design_scores_gemma":[0.0041447305,0.00015161597,0.9677709,0.00016812207,0.00019989119,0.00006785778,0.00006123041,0.00004958424,0.0073638926,0.0032106615,0.01639544,0.00041610145],"about_ca_topic_score_codex":0.000973943,"about_ca_topic_score_gemma":0.00035862334,"teacher_disagreement_score":0.12560128,"about_ca_system_score_codex":0.00003345096,"about_ca_system_score_gemma":0.00007801816,"threshold_uncertainty_score":0.9998637},"labels":[],"label_agreement":null},{"id":"W2739028717","doi":"10.3201/eid2307.161259","title":"Clonal Clusters and Virulence Factors of Group C and G<i>Streptococcus</i>Causing Severe Infections, Manitoba, Canada, 2012–2014","year":2017,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Streptococcal Infections and Treatments","field":"Medicine","cited_by":41,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of Manitoba; Shared Health","funders":"","keywords":"Bacteremia; Virulence; Clade; Streptococcus; Biology; Incidence (geometry); Streptococcus pneumoniae; Microbiology; Disease; Medicine; Internal medicine; Gene; Bacteria; Genetics; Phylogenetics; Antibiotics","score_opus":0.012702538842847801,"score_gpt":0.26145427454994,"score_spread":0.24875173570709222,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2739028717","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9968187,0.00062480115,0.00007860469,0.00011151841,0.00045022328,0.0004809965,0.000113891714,0.00007806297,0.0012431784],"genre_scores_gemma":[0.99928045,0.00028197453,0.00001932662,0.00007821999,0.00011375989,0.000049346625,0.000036444417,0.000025905929,0.00011454998],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99882686,0.000037775084,0.0002728728,0.00037115227,0.00021505562,0.00027630694],"domain_scores_gemma":[0.998829,0.00011515352,0.00025032167,0.0004147767,0.00009066201,0.0003000517],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000051852578,0.0002644929,0.00035573673,0.00013986207,0.00090151274,0.00008812723,0.000049659215,0.00007155422,0.00012615154],"category_scores_gemma":[0.00012343113,0.00023602966,0.00009390505,0.00007470663,0.0002560582,0.00035291334,0.000120383986,0.00014523166,0.0000019899137],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000023873374,0.00024736128,0.9948084,0.00013687255,0.00023267421,0.000027851476,0.000034476638,0.000018396531,0.00015150527,0.00008534492,0.0012026343,0.003030635],"study_design_scores_gemma":[0.0014287271,0.0002554016,0.9953424,0.00018983815,0.00039232435,0.000114403236,0.00012379089,0.00008086869,0.00018573378,0.00008940013,0.0015797368,0.0002173805],"about_ca_topic_score_codex":0.26098084,"about_ca_topic_score_gemma":0.21252222,"teacher_disagreement_score":0.048458617,"about_ca_system_score_codex":0.00015750436,"about_ca_system_score_gemma":0.00016381772,"threshold_uncertainty_score":0.96250105},"labels":[],"label_agreement":null},{"id":"W2760814996","doi":"10.3201/eid2311.170959","title":"Pulmonary versus Nonpulmonary Nontuberculous Mycobacteria, Ontario, Canada","year":2017,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Mycobacterium research and diagnosis","field":"Medicine","cited_by":85,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"West Park Healthcare Centre; Public Health Ontario; University of Toronto; University Health Network","funders":"","keywords":"Nontuberculous mycobacteria; Mycobacterium avium complex; Mycobacterium Infections; Medicine; Mycobacterium; Microbiology; Pulmonary disease; Intensive care medicine; Pathology; Tuberculosis; Biology; Internal medicine","score_opus":0.01451846103162822,"score_gpt":0.27476461924908013,"score_spread":0.2602461582174519,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2760814996","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9236781,0.0003638638,0.0000031724715,0.0008754312,0.002217042,0.0003719061,0.000105594474,0.0001572808,0.07222762],"genre_scores_gemma":[0.9960358,0.00016022917,0.000016298607,0.00034199152,0.0007761089,0.00011912913,0.00019037831,0.000049885246,0.0023101852],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9978776,0.000046044577,0.0002817939,0.00049857394,0.0005935615,0.0007024025],"domain_scores_gemma":[0.99753433,0.00014842393,0.00015694798,0.0011368704,0.00017625577,0.0008471914],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.000085162465,0.00031599443,0.00042241995,0.000113437876,0.0009976357,0.00019145227,0.00029254306,0.000086053595,0.0037055155],"category_scores_gemma":[0.00066779926,0.00030330376,0.00020708995,0.00008278981,0.0001268051,0.00033182473,0.00023348501,0.00031188075,0.000098845565],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0009061139,0.00039835795,0.9708848,0.00012550456,0.0002290766,0.0026765426,0.000042127962,0.000006596191,0.0004181162,0.000026965248,0.017860157,0.006425647],"study_design_scores_gemma":[0.0018162727,0.00028898544,0.9498125,0.00011729733,0.00023306599,0.00018065545,0.000033803924,0.000057297773,0.00013620954,0.00003749095,0.04696053,0.00032589445],"about_ca_topic_score_codex":0.9602496,"about_ca_topic_score_gemma":0.93424845,"teacher_disagreement_score":0.07235771,"about_ca_system_score_codex":0.00097335567,"about_ca_system_score_gemma":0.0023970115,"threshold_uncertainty_score":0.9999419},"labels":[],"label_agreement":null},{"id":"W2761144537","doi":"10.3201/eid2311.170077","title":"Polyclonal Pulmonary Tuberculosis Infections and Risk for Multidrug Resistance, Lima, Peru","year":2017,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Tuberculosis Research and Epidemiology","field":"Medicine","cited_by":13,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Center for Advancing Translational Sciences; National Institute of General Medical Sciences; National Institute of Mental Health; National Institute of Allergy and Infectious Diseases; Natural Sciences and Engineering Research Council of Canada; National Institutes of Health; Imperial College London; Wellcome Trust; Center for AIDS Research, University of Washington; Alfred P. Sloan Foundation","keywords":"Tuberculosis; Mycobacterium tuberculosis; Pulmonary tuberculosis; Multiple drug resistance; Medicine; Immunology; Polyclonal antibodies; Microbiology; Biology; Drug resistance; Pathology; Antibody","score_opus":0.015344496790712108,"score_gpt":0.32408595973015486,"score_spread":0.30874146293944277,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2761144537","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9834524,0.0028642365,0.0002877808,0.004036229,0.00037213034,0.00071003643,0.00032229468,0.00021342917,0.0077414685],"genre_scores_gemma":[0.9923603,0.004400472,0.00021329703,0.00030632716,0.0006446557,0.0003444206,0.00007949859,0.00004409726,0.0016069307],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99830836,0.00012352917,0.00029557996,0.00050839153,0.00019727023,0.0005668422],"domain_scores_gemma":[0.99799055,0.00052988663,0.00017825168,0.0006315739,0.00016533314,0.00050442136],"candidate_categories":["sts"],"consensus_categories":[],"category_scores_codex":[0.0002979777,0.00024374692,0.00043751104,0.00022362894,0.0019933586,0.00009740235,0.000118729244,0.00011317892,0.00012460092],"category_scores_gemma":[0.004498283,0.00021816525,0.000291788,0.00008720723,0.00035595236,0.00026699295,0.00012907694,0.00028759823,0.00002891952],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002818149,0.0004392771,0.97934717,0.00018485595,0.00038864563,0.000023996688,0.0000475408,0.000017726397,0.000265569,0.0003350589,0.010813219,0.007855134],"study_design_scores_gemma":[0.0014510909,0.00024420663,0.9574497,0.00009440969,0.00048417458,0.00006989446,0.000042176674,0.0017073777,0.00004543896,0.0012075207,0.03696828,0.00023575709],"about_ca_topic_score_codex":0.001433225,"about_ca_topic_score_gemma":0.00087848125,"teacher_disagreement_score":0.02615506,"about_ca_system_score_codex":0.00009318046,"about_ca_system_score_gemma":0.000097580276,"threshold_uncertainty_score":0.9993059},"labels":[],"label_agreement":null},{"id":"W2766943224","doi":"10.3201/eid2312.171005","title":"Human Case of<i>Streptococcus suis</i>Disease, Ontario, Canada","year":2017,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Streptococcal Infections and Treatments","field":"Medicine","cited_by":27,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"European Commission","keywords":"Streptococcus suis; Serotype; Streptococcus; Human disease; Microbiology; Disease; Virology; Human pathogen; Biology; Medicine; Bacteria; Virulence; Pathology; Gene; Genetics","score_opus":0.015179457638982565,"score_gpt":0.30070011992248513,"score_spread":0.2855206622835026,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2766943224","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.984003,0.00016860363,0.0000080918635,0.000114126444,0.00048514002,0.00057191536,0.00011536314,0.00010831026,0.014425428],"genre_scores_gemma":[0.99694633,0.000005634745,0.000008377847,0.00007957535,0.0001647134,0.00014069185,0.000053081003,0.0000303479,0.0025712338],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9987744,0.000024579378,0.00031310142,0.00035423468,0.00021353188,0.0003201511],"domain_scores_gemma":[0.9980366,0.000031071246,0.00025977707,0.0009768604,0.00017192775,0.00052372256],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.000036191715,0.00024972603,0.00036814416,0.00010590651,0.0011036335,0.00006142755,0.00009883179,0.000045045836,0.0016412928],"category_scores_gemma":[0.00016185327,0.00023058464,0.00023412492,0.00007949329,0.00014644659,0.00013984904,0.00008371725,0.00014505933,0.0000108280365],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000025363033,0.0005350226,0.98912513,0.000085237676,0.0003140741,0.0039728526,0.000033667762,0.00003622829,0.00004779385,0.0002644027,0.0043572704,0.0012029689],"study_design_scores_gemma":[0.001835335,0.00016328442,0.9915812,0.00012279754,0.00067747914,0.00029232455,0.00003327083,0.000017719061,0.00019099838,0.0002093258,0.0046639433,0.00021231367],"about_ca_topic_score_codex":0.9691085,"about_ca_topic_score_gemma":0.9631494,"teacher_disagreement_score":0.012943323,"about_ca_system_score_codex":0.00046998003,"about_ca_system_score_gemma":0.0011207989,"threshold_uncertainty_score":0.99927133},"labels":[],"label_agreement":null},{"id":"W2770803988","doi":"10.3201/eid2402.171756","title":"Ceftriaxone-Resistant <i>Neisseria gonorrhoeae</i>, Canada, 2017","year":2017,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Reproductive tract infections research","field":"Immunology and Microbiology","cited_by":140,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Institut National de Santé Publique du Québec","funders":"","keywords":"Neisseria gonorrhoeae; Ceftriaxone; Microbiology; Biology; Cephalosporin; Antibiotic resistance; Neisseriaceae; Antimicrobial; Men who have sex with men; Gonococcal infection; Virology; Antibiotics; Sexually transmitted disease; Syphilis; Human immunodeficiency virus (HIV)","score_opus":0.01504170929890696,"score_gpt":0.2858954965101496,"score_spread":0.27085378721124265,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2770803988","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9606633,0.0034836943,0.00004779515,0.0009716241,0.0039614257,0.00046887784,0.00019861119,0.00029634993,0.029908324],"genre_scores_gemma":[0.99294585,0.00015150059,0.0000046610726,0.00007292634,0.00022870123,0.000104980165,0.000091101065,0.000037960846,0.0063623195],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99813104,0.00019881332,0.0003172393,0.000618391,0.00005858692,0.0006759314],"domain_scores_gemma":[0.9976068,0.00014264733,0.00027554817,0.0016236404,0.00024828248,0.000103059276],"candidate_categories":["metaepi_narrow","sts","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00023096048,0.00028954574,0.0003481363,0.00017163182,0.0028763497,0.00019189423,0.000590677,0.00012108446,0.0014960442],"category_scores_gemma":[0.0015702655,0.0002793987,0.00015700485,0.00012339301,0.00038892883,0.00037806758,0.00023004346,0.00039923223,0.0006120641],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0004198461,0.00083616585,0.63703513,0.00010935136,0.001081739,0.000054593198,0.00011535101,0.00019724444,0.11057386,0.0018941712,0.23526487,0.012417694],"study_design_scores_gemma":[0.001173832,0.00012614955,0.6294826,0.000028964218,0.000099920486,0.000088268214,0.00006345734,0.000004183595,0.0055039693,0.00026343847,0.3627554,0.00040977643],"about_ca_topic_score_codex":0.4325411,"about_ca_topic_score_gemma":0.2740087,"teacher_disagreement_score":0.15853241,"about_ca_system_score_codex":0.00030129508,"about_ca_system_score_gemma":0.0008295732,"threshold_uncertainty_score":0.99996585},"labels":[],"label_agreement":null},{"id":"W2771428239","doi":"10.3201/eid2403.171892","title":"Ceftriaxone-Resistant <i>Neisseria gonorrhoeae</i>, Canada, 2017","year":2017,"lang":"en","type":"letter","venue":"Emerging infectious diseases","topic":"Reproductive tract infections research","field":"Immunology and Microbiology","cited_by":12,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"Universidad Nacional Mayor de San Marcos; Conselho Nacional de Desenvolvimento Científico e Tecnológico; Coordenação de Aperfeiçoamento de Pessoal de Nível Superior","keywords":"Neisseria gonorrhoeae; Ceftriaxone; Microbiology; Gonococcal infection; Neisseriaceae; Neisseria; Gonorrhea; Biology; Medicine; Virology; Antibiotics; Sexually transmitted disease; Bacteria; Syphilis; Genetics","score_opus":0.01610851519172065,"score_gpt":0.2746577985216577,"score_spread":0.2585492833299371,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2771428239","genre_codex":"commentary","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"commentary","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.09825169,0.0650711,0.000091733455,0.6338368,0.059394605,0.0058553065,0.008619,0.0031419273,0.1257378],"genre_scores_gemma":[0.63355505,0.0016291738,0.000012941784,0.122655794,0.015765095,0.0016395242,0.012928197,0.0007880015,0.2110262],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9956497,0.0006507317,0.0006558491,0.0014571804,0.00014281631,0.0014437088],"domain_scores_gemma":[0.9955044,0.0004398977,0.0006971124,0.0027578226,0.0004986982,0.000102117134],"candidate_categories":["metaepi_narrow","sts","research_integrity","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00028668946,0.00086134055,0.0010205139,0.0005497499,0.0021977802,0.00026601064,0.0011291617,0.0010079212,0.002913232],"category_scores_gemma":[0.0015503379,0.000851312,0.0004652606,0.00024394786,0.0005920652,0.00030481696,0.0003321131,0.0033765442,0.001445396],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007344054,0.00014276593,0.0058740135,0.00021321198,0.0010500601,0.00027437788,0.000021665277,0.000021323604,0.0019576468,0.000020602982,0.9892888,0.0010620632],"study_design_scores_gemma":[0.00083573867,0.00014186499,0.01275978,0.0001101933,0.0003658995,0.0003298495,0.000015321279,8.0026666e-7,0.00045956,0.0001271749,0.9839587,0.0008951254],"about_ca_topic_score_codex":0.4807097,"about_ca_topic_score_gemma":0.14424928,"teacher_disagreement_score":0.53530335,"about_ca_system_score_codex":0.0009136537,"about_ca_system_score_gemma":0.002938379,"threshold_uncertainty_score":0.99939376},"labels":[],"label_agreement":null},{"id":"W2774425008","doi":"10.3201/eid2401.170484","title":"High Seroprevalence of Jamestown Canyon Virus among Deer and Humans, Nova Scotia, Canada","year":2017,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Animal Disease Management and Epidemiology","field":"Agricultural and Biological Sciences","cited_by":24,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Nova scotia; Seroprevalence; Canyon; Geography; Virology; Nova (rocket); Biology; Zoology; Archaeology; Serology; Cartography; Immunology; Antibody","score_opus":0.013870396820809625,"score_gpt":0.23184510263703545,"score_spread":0.21797470581622583,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2774425008","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9977636,0.00035771268,0.000002052806,0.0004550933,0.00027807883,0.00013324895,0.00010280657,0.000045665318,0.00086176145],"genre_scores_gemma":[0.99921376,0.00014308702,0.0000045012257,0.00022298205,0.0001661837,0.000005866431,0.00002917027,0.0000016517776,0.00021281494],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99901706,0.00005730352,0.00020553837,0.00029583956,0.0001538287,0.00027043832],"domain_scores_gemma":[0.99935067,0.000084698244,0.00022661446,0.00012653267,0.000053601067,0.0001579093],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00008507173,0.0001556669,0.00023990548,0.000013256149,0.0004700692,0.000054895758,0.00025228228,0.00004184606,0.0006546859],"category_scores_gemma":[0.00022459663,0.00007538012,0.00006543801,0.000058641006,0.00021717313,0.00017770485,0.00017504588,0.00006636323,0.0000060701173],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00001422838,0.000041921783,0.9895896,0.000036437777,0.00003251759,0.000009529037,0.000008802555,0.000038864433,0.0010843191,0.0003576233,0.00515496,0.0036312437],"study_design_scores_gemma":[0.0001155492,0.000076688826,0.9982665,0.000039403832,0.00006872394,6.058451e-7,0.000040169238,0.00007076776,0.000056650824,0.00023712305,0.0008611739,0.00016664853],"about_ca_topic_score_codex":0.8746528,"about_ca_topic_score_gemma":0.92718965,"teacher_disagreement_score":0.052536894,"about_ca_system_score_codex":0.00003175146,"about_ca_system_score_gemma":0.000023009074,"threshold_uncertainty_score":0.71683514},"labels":[],"label_agreement":null},{"id":"W2782227707","doi":"10.3201/eid2402.171018","title":"Development of a Pediatric Ebola Predictive Score, Sierra Leone1","year":2018,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Viral Infections and Outbreaks Research","field":"Medicine","cited_by":11,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Response Biomedical (Canada)","funders":"Medical Research Council; National Institute for Health and Care Research; NIHR Biomedical Research Centre, Royal Marsden NHS Foundation Trust/Institute of Cancer Research; University College London; Great Ormond Street Hospital for Children; Wellcome Trust; London School of Hygiene and Tropical Medicine","keywords":"Sierra leone; Logistic regression; Medicine; Ebola virus; Triage; Receiver operating characteristic; Pediatrics; Internal medicine; Disease; Emergency medicine","score_opus":0.024017373588151078,"score_gpt":0.31950518274899903,"score_spread":0.29548780916084794,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2782227707","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9828361,0.00039765777,0.002476541,0.000044659755,0.0003411305,0.00037060698,0.000017524897,0.00022157223,0.013294203],"genre_scores_gemma":[0.99796104,0.00008179257,0.0002890373,0.00006612377,0.0009473103,0.000067436544,0.00002159197,0.000029209139,0.00053645705],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9985794,0.000041125782,0.00034892763,0.0002891387,0.0003932587,0.00034814945],"domain_scores_gemma":[0.9989459,0.000044364566,0.00010459228,0.00023270707,0.00041469294,0.0002577699],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013961653,0.00017087828,0.00027407744,0.00044502187,0.00031232781,0.000019992747,0.00006766045,0.000065843065,0.0006344536],"category_scores_gemma":[0.00020626375,0.00014972704,0.00013521002,0.00073185045,0.00016845118,0.00011711255,0.00009227369,0.00015817062,0.00013616354],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00030038788,0.0013034862,0.96166134,0.00035709763,0.0003736919,0.00002288912,0.0012354496,0.000024351953,0.004013764,0.00017113898,0.0047699106,0.025766466],"study_design_scores_gemma":[0.0022910584,0.00144053,0.9743459,0.00014840775,0.0004682606,0.000050802737,0.00025094196,0.00075769855,0.009096166,0.00016105906,0.01063601,0.00035313395],"about_ca_topic_score_codex":0.00008220749,"about_ca_topic_score_gemma":0.000040306975,"teacher_disagreement_score":0.025413333,"about_ca_system_score_codex":0.00012340075,"about_ca_system_score_gemma":0.00048110797,"threshold_uncertainty_score":0.6946822},"labels":[],"label_agreement":null},{"id":"W2783514843","doi":"10.3201/eid2402.171268","title":"Spread of Meropenem-Resistant<i>Streptococcus pneumoniae</i>Serotype 15A-ST63 Clone in Japan, 2012–2014","year":2018,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Pneumonia and Respiratory Infections","field":"Medicine","cited_by":47,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Serotype; Meropenem; Streptococcus pneumoniae; Multilocus sequence typing; Microbiology; Pneumococcal infections; Biology; Virology; Gene; Antibiotic resistance; Genetics; Genotype; Antibiotics","score_opus":0.009791585567871856,"score_gpt":0.27969603793840947,"score_spread":0.2699044523705376,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2783514843","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9871285,0.0007148356,0.000053153974,0.0006127566,0.0007791916,0.0007167619,0.000057240853,0.00029566168,0.00964189],"genre_scores_gemma":[0.9977479,0.00017365791,0.000008717742,0.00065225153,0.0005198298,0.00013243234,0.000024984674,0.00006279986,0.00067745266],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99779314,0.00013538728,0.0006516043,0.0005081742,0.0003727125,0.00053896866],"domain_scores_gemma":[0.99823236,0.00011044959,0.0002550056,0.0006727497,0.00039339543,0.00033604752],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00018233203,0.00034722706,0.0006209453,0.000526474,0.00024181312,0.000027593565,0.00015478088,0.0001498092,0.001063308],"category_scores_gemma":[0.00034078798,0.0003140679,0.00026822934,0.00079063815,0.00039083167,0.00024621762,0.000096106094,0.0002803664,0.000382776],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000107809276,0.0009469341,0.88103145,0.00018734368,0.00015887717,0.0000422606,0.00018592345,0.000052539064,0.10900239,0.00017270565,0.005879416,0.0022323374],"study_design_scores_gemma":[0.0024627822,0.0016659737,0.9504672,0.0004448592,0.000396328,0.000038247315,0.00014047291,0.00008367723,0.0066287178,0.00021293326,0.03699198,0.00046677716],"about_ca_topic_score_codex":0.00040488853,"about_ca_topic_score_gemma":0.0007234795,"teacher_disagreement_score":0.10237367,"about_ca_system_score_codex":0.00013266974,"about_ca_system_score_gemma":0.00025366884,"threshold_uncertainty_score":0.99993116},"labels":[],"label_agreement":null},{"id":"W2783568775","doi":"10.3201/eid2402.171371","title":"Effects of Culling on<i>Leptospira interrogans</i>Carriage by Rats","year":2018,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Leptospirosis research and findings","field":"Immunology and Microbiology","cited_by":40,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan; University of British Columbia","funders":"Natural Sciences and Engineering Research Council of Canada; University of British Columbia; Northwest Scientific Association","keywords":"Leptospira interrogans; Carriage; Culling; Leptospira; Biology; Microbiology; Veterinary medicine; Medicine; Serotype; Pathology","score_opus":0.004108749158370809,"score_gpt":0.24282496695766448,"score_spread":0.23871621779929367,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2783568775","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9933684,0.0019389836,0.00035934403,0.00009134061,0.0011054991,0.00031182164,0.000067772824,0.00021444465,0.0025424222],"genre_scores_gemma":[0.9984953,0.00010516843,0.0000048932447,0.00034717118,0.0001351741,0.000049558977,0.00006161557,0.000031978252,0.0007691428],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9985989,0.00015813811,0.00027267882,0.00036723918,0.000085435655,0.000517617],"domain_scores_gemma":[0.9991455,0.00026646774,0.00013313696,0.0002621503,0.00011466612,0.00007805506],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000106413296,0.0002306083,0.0003132054,0.00018793631,0.00032276296,0.000026244892,0.00024145284,0.00013987938,0.0007771347],"category_scores_gemma":[0.000423749,0.00020642436,0.0001821544,0.00025716328,0.0004582552,0.000117710944,0.00010566605,0.00025425144,0.00074482616],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00020161198,0.0007816905,0.043748826,0.00015953639,0.00038439943,0.000008209983,0.0007065139,0.000003341928,0.8834086,0.0004565219,0.064686455,0.0054542897],"study_design_scores_gemma":[0.0019689642,0.0016954821,0.0073010083,0.00019521777,0.00009494086,0.0000059698996,0.00008227902,0.000006436748,0.937442,0.00022326701,0.05066498,0.00031945025],"about_ca_topic_score_codex":0.00010645879,"about_ca_topic_score_gemma":0.0000085769025,"teacher_disagreement_score":0.054033395,"about_ca_system_score_codex":0.000056508365,"about_ca_system_score_gemma":0.00004596877,"threshold_uncertainty_score":0.95734817},"labels":[],"label_agreement":null},{"id":"W2789313318","doi":"10.3201/eid2403.171378","title":"Increase in Hospital Admissions for Severe Influenza A/B among Travelers on Cruise Ships to Alaska, 2015","year":2018,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Influenza Virus Research Studies","field":"Medicine","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of British Columbia; BC Centre for Disease Control; Providence Health Care","funders":"British Columbia Centre for Disease Control; Providence Health Care","keywords":"Cruise; Environmental health; Medicine; Virology; Geography; Medical emergency; Emergency medicine; Engineering","score_opus":0.03695760666026055,"score_gpt":0.3765612848508647,"score_spread":0.33960367819060416,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2789313318","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99239427,0.00028237194,0.000038657126,0.0011615126,0.00032880311,0.0019578373,0.00015953153,0.00027259946,0.0034043964],"genre_scores_gemma":[0.99500585,0.00003095803,0.00009890817,0.0028228178,0.0006671194,0.00067958335,0.000024250423,0.000072828574,0.0005976803],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9975723,0.00009598811,0.00041990232,0.00058322994,0.0005094866,0.0008190857],"domain_scores_gemma":[0.9975176,0.0003324024,0.00008843249,0.00048141056,0.00041840877,0.001161764],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00025112173,0.00035756768,0.00046997285,0.0006782467,0.00043154642,0.000051372794,0.00015829745,0.00010740349,0.00040372214],"category_scores_gemma":[0.0073478017,0.0003220396,0.00021589421,0.000666383,0.00021051826,0.00019515978,0.00014019248,0.00028569702,0.0002205029],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0017165139,0.0014607632,0.8908893,0.00021054142,0.0002457942,0.00007657052,0.0020487683,0.0002756021,0.0001663505,0.0001097752,0.09911406,0.0036859894],"study_design_scores_gemma":[0.0053211073,0.0038455958,0.9433533,0.00072734925,0.00017651964,0.0000066637667,0.00063512556,0.00025473253,0.00043642137,0.00028716514,0.04436067,0.0005953547],"about_ca_topic_score_codex":0.00048570803,"about_ca_topic_score_gemma":0.00033159624,"teacher_disagreement_score":0.054753393,"about_ca_system_score_codex":0.00038118416,"about_ca_system_score_gemma":0.00040219084,"threshold_uncertainty_score":0.99992317},"labels":[],"label_agreement":null},{"id":"W2792848668","doi":"10.3201/eid2404.171873","title":"Cooperative Recognition of Internationally Disseminated Ceftriaxone-Resistant <i>Neisseria</i><i>gonorrhoeae</i> Strain","year":2018,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Reproductive tract infections research","field":"Immunology and Microbiology","cited_by":238,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Institut National de Santé Publique du Québec; Public Health Agency of Canada","funders":"National Health and Medical Research Council; NSW Ministry of Health; Public Health Agency; Australian Government; NSW Health Pathology; University of Queensland; South Eastern Sydney Local Health District; Public Health Agency of Canada; World Health Organization","keywords":"Neisseria gonorrhoeae; Ceftriaxone; Multilocus sequence typing; Biology; Typing; Virology; Men who have sex with men; Phylogenetic tree; Microbiology; Antibiotic resistance; Genetics; Genotype; Gene; Antibiotics; Syphilis","score_opus":0.015026390347459395,"score_gpt":0.2925871871347885,"score_spread":0.2775607967873291,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2792848668","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9882127,0.0007071383,0.0006288086,0.00014580664,0.0010585538,0.0004762238,0.0005959848,0.0002507139,0.007924082],"genre_scores_gemma":[0.9978333,0.000079672835,0.000024335595,0.000042877644,0.00017779907,0.00009774422,0.0006639478,0.000031867774,0.0010484264],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9982745,0.00036751313,0.0004567257,0.0004825689,0.00005824478,0.00036043182],"domain_scores_gemma":[0.9980369,0.0002604306,0.00021762811,0.00035675857,0.00107747,0.00005079201],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00030382295,0.00023258427,0.0003032427,0.000399464,0.00037349685,0.00003598299,0.00019537756,0.00012151269,0.0033169708],"category_scores_gemma":[0.0012109753,0.0002211995,0.00014258487,0.0006496536,0.0006253083,0.0002886497,0.00008271433,0.00025379585,0.00063921],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006654504,0.0011949724,0.02153397,0.000055949644,0.0006779566,0.000002738523,0.00051269407,0.000041528943,0.9518384,0.0008316985,0.004793956,0.01785072],"study_design_scores_gemma":[0.0051729563,0.0038697955,0.24049763,0.00038627023,0.00043017746,0.00019171427,0.0011851288,0.000055009594,0.6991495,0.0031662097,0.04465908,0.0012365317],"about_ca_topic_score_codex":0.00027463716,"about_ca_topic_score_gemma":0.00012154507,"teacher_disagreement_score":0.25268888,"about_ca_system_score_codex":0.00011410871,"about_ca_system_score_gemma":0.00016589167,"threshold_uncertainty_score":0.9975941},"labels":[],"label_agreement":null},{"id":"W2793249369","doi":"10.3201/eid2404.171765","title":"<i>Emergomyces canadensis,</i>a Dimorphic Fungus Causing Fatal Systemic Human Disease in North America","year":2018,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Fungal Infections and Studies","field":"Medicine","cited_by":53,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of Saskatchewan; University of Alberta","funders":"Royal College of Physicians and Surgeons of Canada","keywords":"Dimorphic fungus; Disease; Fungus; Pathogenic fungus; Biology; Sexual dimorphism; Systemic disease; Medicine; Zoology; Pathology; Botany","score_opus":0.01240829169663937,"score_gpt":0.269335420559289,"score_spread":0.2569271288626496,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2793249369","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99370444,0.002726416,0.00006184593,0.00020711315,0.00076457596,0.0004288854,0.000090505026,0.00036400172,0.0016522192],"genre_scores_gemma":[0.9978759,0.0002007333,0.000009041674,0.00042849974,0.00091324205,0.00010174657,0.00010508629,0.000052506246,0.00031324424],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9980406,0.00008512152,0.00045630572,0.0005246446,0.0003246387,0.0005686785],"domain_scores_gemma":[0.99867946,0.0000633071,0.00014162574,0.0004380915,0.00022910269,0.00044838744],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.000060973995,0.00034144594,0.00050195656,0.00046012126,0.0007453953,0.000054371463,0.00007016838,0.00004712044,0.00025440153],"category_scores_gemma":[0.00024256039,0.00032011652,0.00019656474,0.0009949772,0.00032288206,0.00016771407,0.00009977405,0.00022617045,0.00007463596],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007470363,0.00032909372,0.9945046,0.00025483212,0.00016292291,0.0005070193,0.00049873994,0.00033431567,0.0005660263,0.00003837229,0.0021609669,0.0005684445],"study_design_scores_gemma":[0.0014338846,0.00048138268,0.9899569,0.00052013795,0.00057507126,0.00015610697,0.0004826164,0.00063841534,0.00007186695,0.000050257742,0.0050612814,0.00057205075],"about_ca_topic_score_codex":0.009575845,"about_ca_topic_score_gemma":0.017372545,"teacher_disagreement_score":0.0077967,"about_ca_system_score_codex":0.00031640244,"about_ca_system_score_gemma":0.00020427674,"threshold_uncertainty_score":0.9999251},"labels":[],"label_agreement":null},{"id":"W2795617811","doi":"10.3201/eid2405.171918","title":"The Power of Plagues, Second Edition","year":2018,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Historical Studies on Reproduction, Gender, Health, and Societal Changes","field":"Arts and Humanities","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University","funders":"","keywords":"Medicine; Library science; Data science; Computer science","score_opus":0.021578149814653353,"score_gpt":0.251865893774143,"score_spread":0.23028774395948962,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2795617811","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.6446845,0.016043192,0.000060014012,0.0023452886,0.02076758,0.0005060895,0.00018307744,0.0005384933,0.3148718],"genre_scores_gemma":[0.98686725,0.00032691972,0.0000013080787,0.00021276022,0.0039697886,0.00002520651,0.000007673175,0.000013364543,0.008575723],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99919915,0.00004620568,0.00019104649,0.00018107917,0.00017650369,0.00020603673],"domain_scores_gemma":[0.99930555,0.00007650453,0.000106349056,0.00018821657,0.00025980538,0.0000635646],"candidate_categories":["sts","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00011923712,0.000101952144,0.00012744294,0.00003396528,0.0019092781,0.0000417145,0.00007455246,0.000023317172,0.002023708],"category_scores_gemma":[0.00008993312,0.00007284726,0.000099422046,0.000056261655,0.0005896393,0.00009338183,0.000025237281,0.000069067384,0.000060645838],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00005105819,0.0003821184,0.004896577,0.00017242978,0.00029047264,0.0000013220824,0.13691577,0.000002025969,0.000026890257,0.0851024,0.7643648,0.0077941474],"study_design_scores_gemma":[0.00012024128,0.0002007015,0.002467342,0.000008923786,0.000030056373,8.4223717e-7,0.0072941603,0.0000029784778,0.000033805823,0.0019768847,0.98776305,0.00010100467],"about_ca_topic_score_codex":0.00023432555,"about_ca_topic_score_gemma":0.0018342384,"teacher_disagreement_score":0.34218276,"about_ca_system_score_codex":0.00007641749,"about_ca_system_score_gemma":0.000033314762,"threshold_uncertainty_score":0.9993901},"labels":[],"label_agreement":null},{"id":"W2800524745","doi":"10.3201/eid2406.171648","title":"Genomic Epidemiology of Global Carbapenemase-Producing<i>Enterobacter</i>spp., 2008–2014","year":2018,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Antibiotic Resistance in Bacteria","field":"Biochemistry, Genetics and Molecular Biology","cited_by":155,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"National Institute of Allergy and Infectious Diseases","keywords":"Klebsiella pneumoniae; Enterobacter; Biology; Whole genome sequencing; Molecular epidemiology; Clade; Multilocus sequence typing; DNA sequencing; Microbiology; Genome; Genetics; Genotype; Gene; Phylogenetics; Escherichia coli","score_opus":0.009233062139192219,"score_gpt":0.27397766858884215,"score_spread":0.2647446064496499,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2800524745","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9940574,0.0020065955,0.0012788814,0.000082433064,0.0010044671,0.00017490507,0.00011245335,0.00005552999,0.0012273113],"genre_scores_gemma":[0.9977755,0.000221885,0.00030645437,0.0003561553,0.0010155,0.000008497357,0.00011298463,0.00003098036,0.00017205703],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99821854,0.00019629375,0.00046006797,0.00060122076,0.00009358386,0.00043028494],"domain_scores_gemma":[0.99866176,0.00003331115,0.00029148278,0.000706016,0.00016472643,0.0001426855],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00022032108,0.0002471045,0.0003601365,0.00003761574,0.00012652825,0.000009163028,0.0002555054,0.00012914771,0.00020147454],"category_scores_gemma":[0.0005489265,0.0002452433,0.00019734197,0.000121021476,0.0004154291,0.0000073967035,0.0001750015,0.000057655318,0.000096802134],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010595068,0.00010576183,0.9494669,0.00004858768,0.00012524385,0.000002228729,0.000013839394,0.00004447686,0.037221342,0.00011175542,0.012401782,0.00035214177],"study_design_scores_gemma":[0.00048295822,0.00043043063,0.98465925,0.000043005042,0.000086435044,0.000029054203,0.000018219445,0.00002237671,0.005213985,0.00035404897,0.008375799,0.00028441966],"about_ca_topic_score_codex":0.00021064225,"about_ca_topic_score_gemma":0.00022183845,"teacher_disagreement_score":0.035192378,"about_ca_system_score_codex":0.00005787637,"about_ca_system_score_gemma":0.000116855765,"threshold_uncertainty_score":1},"labels":[],"label_agreement":null},{"id":"W2804957639","doi":"10.3201/eid2407.161783","title":"Registry Cohort Study to Determine Risk for Multiple Sclerosis after Vaccination for Pandemic Influenza A(H1N1) with Arepanrix, Manitoba, Canada","year":2018,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Influenza Virus Research Studies","field":"Medicine","cited_by":17,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of Manitoba; Government of Manitoba; Health Sciences Centre","funders":"Sanofi Pasteur; University of Manitoba; Sanofi; GlaxoSmithKline; Pfizer","keywords":"Medicine; Vaccination; Pandemic; Cohort; Incidence (geometry); Hazard ratio; Immunization; Cohort study; Pediatrics; Environmental health; Internal medicine; Immunology; Coronavirus disease 2019 (COVID-19); Confidence interval; Disease; Infectious disease (medical specialty)","score_opus":0.05247742614431141,"score_gpt":0.32815615790972497,"score_spread":0.2756787317654136,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2804957639","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9915357,0.0002907983,0.0010234118,0.00006405895,0.00025310175,0.0060198363,0.00050633185,0.00022047124,0.00008626438],"genre_scores_gemma":[0.99270177,0.00002826953,0.00026549585,0.00092589844,0.00065818516,0.005169904,0.000034093675,0.00007835036,0.00013805578],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99769795,0.000067652516,0.00040713357,0.00064157374,0.0005511908,0.00063450687],"domain_scores_gemma":[0.9973515,0.00043452138,0.00018269668,0.0005713267,0.0011177649,0.00034215464],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00029785253,0.00033688702,0.00048306957,0.00022724489,0.0006510928,0.000059268797,0.00013063365,0.00004774652,0.00005066883],"category_scores_gemma":[0.0027871435,0.00028295274,0.000118954566,0.00034347706,0.00007008542,0.0001441997,0.00010152478,0.00014154645,0.000008747432],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0027580599,0.00043290074,0.9863801,0.00019919129,0.00060025783,0.0000115742105,0.00033962252,0.00010640735,0.00007211583,8.710416e-7,0.0050902306,0.0040086596],"study_design_scores_gemma":[0.005322452,0.0024926574,0.98242253,0.00014783996,0.00076516985,0.0000066818475,0.0006799411,0.00047436907,0.00023923026,0.00001459326,0.0070902226,0.00034430186],"about_ca_topic_score_codex":0.15592383,"about_ca_topic_score_gemma":0.7578342,"teacher_disagreement_score":0.60191035,"about_ca_system_score_codex":0.00079568865,"about_ca_system_score_gemma":0.00050445035,"threshold_uncertainty_score":0.9999623},"labels":[],"label_agreement":null},{"id":"W2808163705","doi":"10.3201/eid2407.171650","title":"Perceptions of Zika Virus Risk during 2016 Outbreak, Miami-Dade County, Florida, USA","year":2018,"lang":"en","type":"letter","venue":"Emerging infectious diseases","topic":"COVID-19 epidemiological studies","field":"Mathematics","cited_by":18,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Waterloo","funders":"Centers for Disease Control and Prevention","keywords":"Miami; Outbreak; Zika virus; Psychological intervention; Medicine; Geography; Environmental health; Demography; Gerontology; Virology; Virus; Sociology","score_opus":0.05577525917787616,"score_gpt":0.3561761332310879,"score_spread":0.3004008740532117,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2808163705","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8787461,0.0029635094,0.0028317824,0.092377216,0.0050319363,0.002258418,0.008169301,0.0023332653,0.0052884948],"genre_scores_gemma":[0.5971908,0.015196402,0.001657585,0.3008172,0.061319634,0.0019876407,0.000931031,0.0012339905,0.019665753],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99549913,0.00060957024,0.0012057762,0.0010148875,0.0007156902,0.00095492706],"domain_scores_gemma":[0.9935031,0.0035619228,0.0011547642,0.0011260075,0.00047269242,0.00018149313],"candidate_categories":["metaresearch","metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00045041513,0.00086832605,0.0016018878,0.00038678566,0.00086671335,0.000063732274,0.00054993865,0.0007042988,0.002318708],"category_scores_gemma":[0.009102265,0.00073373114,0.00094530766,0.00037686166,0.00066383905,0.000158511,0.0006046646,0.0013742427,0.00050147483],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000019780164,0.00018676394,0.13684535,0.0011038654,0.00059450837,0.000050850864,0.00020078657,0.000048037888,0.000052498726,0.000034068813,0.86073065,0.00013282783],"study_design_scores_gemma":[0.0015135602,0.00038558745,0.28196955,0.0014127322,0.0037770846,0.000036274138,0.0001382699,0.000121036086,0.00008460065,0.03661463,0.67149913,0.0024475493],"about_ca_topic_score_codex":0.0036047483,"about_ca_topic_score_gemma":0.00063184876,"teacher_disagreement_score":0.2815553,"about_ca_system_score_codex":0.0005672316,"about_ca_system_score_gemma":0.00014355849,"threshold_uncertainty_score":0.99951136},"labels":[],"label_agreement":null},{"id":"W2810199389","doi":"10.3201/eid2408.180295","title":"Direct Detection of <i>penA</i> Gene Associated with Ceftriaxone-Resistant <i>Neisseria gonorrhoeae</i> FC428 Strain by Using PCR","year":2018,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Reproductive tract infections research","field":"Immunology and Microbiology","cited_by":31,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"National Health and Medical Research Council; University of Queensland; Australian Government","keywords":"Neisseria gonorrhoeae; Ceftriaxone; Microbiology; Strain (injury); Biology; Neisseriaceae; clone (Java method); Gene; Virology; Polymerase chain reaction; Cephalosporin; Antibiotics; Genetics","score_opus":0.012697726630574566,"score_gpt":0.2625050151657931,"score_spread":0.24980728853521855,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2810199389","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9933997,0.0018157607,0.0009872011,0.00002476084,0.0007136488,0.000540987,0.0004880783,0.00036589007,0.0016640057],"genre_scores_gemma":[0.9989762,0.0000603924,0.000013611144,0.000029501996,0.00013539368,0.00006104593,0.00022170725,0.00006660066,0.0004355539],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99754673,0.000584421,0.00047526238,0.00066937425,0.00008588704,0.000638323],"domain_scores_gemma":[0.9981689,0.00024673736,0.00037271497,0.00055682746,0.0005774233,0.0000774089],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00043904307,0.0003481243,0.00049147615,0.0003610054,0.00072528375,0.000046830755,0.0001956531,0.00020099695,0.00045469793],"category_scores_gemma":[0.00078600546,0.00031834334,0.00016969065,0.0010599681,0.00070575246,0.00029584745,0.00007828282,0.00031025943,0.00008092004],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00046848948,0.0007562432,0.023979604,0.00002814283,0.00074382435,0.0000018458805,0.00010784247,0.00013502952,0.9710794,0.000013858987,0.00056228304,0.0021233982],"study_design_scores_gemma":[0.002588528,0.0019039663,0.034971975,0.00011181648,0.00044497158,0.00008096417,0.0001375114,0.000042290096,0.9506327,0.00007455136,0.008390767,0.00061999384],"about_ca_topic_score_codex":0.0011171496,"about_ca_topic_score_gemma":0.00038693208,"teacher_disagreement_score":0.020446772,"about_ca_system_score_codex":0.00028297037,"about_ca_system_score_gemma":0.00020193061,"threshold_uncertainty_score":0.99992687},"labels":[],"label_agreement":null},{"id":"W2889092765","doi":"10.3201/eid2410.171711","title":"Genetic Diversity and Antimicrobial Drug Resistance of Serotype VI Group B <i>Streptococcus,</i> Canada","year":2018,"lang":"en","type":"letter","venue":"Emerging infectious diseases","topic":"Neonatal and Maternal Infections","field":"Medicine","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Public Health Ontario; University of Toronto; Public Health Agency of Canada","funders":"","keywords":"Serotype; Erythromycin; Penicillin; Clindamycin; Microbiology; Biology; Antibiotic resistance; Streptococcus; Drug resistance; Virology; Streptococcus pneumoniae; Population; Antimicrobial; Group A; Clade; Antibiotics; Medicine; Genetics; Gene; Bacteria; Phylogenetics","score_opus":0.0055265425455859225,"score_gpt":0.2049970944857912,"score_spread":0.19947055194020527,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2889092765","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.96595573,0.0008674393,0.000031578624,0.02871089,0.0016359402,0.00066243793,0.0006735458,0.00017827579,0.0012841675],"genre_scores_gemma":[0.8689854,0.00036945395,0.00004440835,0.11979074,0.003207227,0.000035536836,0.00027593446,0.0000818391,0.007209445],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99860346,0.000053353735,0.00028402306,0.0004216738,0.00032034464,0.00031715631],"domain_scores_gemma":[0.99906874,0.000062174666,0.00022010742,0.00033168084,0.00017436521,0.00014292104],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.000032259348,0.00030806815,0.000471506,0.00013432153,0.000504806,0.000017076485,0.000107275955,0.00014528912,0.0001812412],"category_scores_gemma":[0.00003846098,0.00029813542,0.00014078002,0.00016604534,0.00020932818,0.00006108121,0.00038962997,0.000423478,0.0000067687956],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000039617797,0.000054286764,0.23019233,0.0011836824,0.00015734353,0.00033801232,0.00004152346,0.0000013993391,0.00013187563,0.0000025739075,0.76779306,0.00006431091],"study_design_scores_gemma":[0.0011036139,0.00011413209,0.15789317,0.0008706289,0.0010533828,0.0001175078,0.000008260225,0.000003798721,0.00054046937,0.00013429674,0.8376318,0.0005289495],"about_ca_topic_score_codex":0.24831691,"about_ca_topic_score_gemma":0.1787679,"teacher_disagreement_score":0.09697031,"about_ca_system_score_codex":0.00016190928,"about_ca_system_score_gemma":0.0002431779,"threshold_uncertainty_score":0.9999471},"labels":[],"label_agreement":null},{"id":"W2899476282","doi":"10.3201/eid2412.180702","title":"Novel Type of Chronic Wasting Disease Detected in Moose (<i>Alces alces</i>), Norway","year":2018,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Prion Diseases and Protein Misfolding","field":"Biochemistry, Genetics and Molecular Biology","cited_by":169,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canadian Food Inspection Agency","funders":"","keywords":"Chronic wasting disease; Wasting; Disease; Type (biology); Biology; Virology; Medicine; Ecology; Pathology; Internal medicine","score_opus":0.009854674312223187,"score_gpt":0.2687303642148713,"score_spread":0.2588756899026481,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2899476282","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9813391,0.01656879,0.0011081977,0.000034856686,0.00034376935,0.00024083204,0.00007074635,0.000050131428,0.00024356143],"genre_scores_gemma":[0.9978708,0.0011055958,0.00007875448,0.00009405205,0.0006420734,0.00003520993,0.00007457575,0.000037812795,0.000061131585],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9986629,0.00006033263,0.0003114687,0.00042459846,0.00017150473,0.0003691819],"domain_scores_gemma":[0.9990653,0.000025787542,0.00015837289,0.00038131094,0.00014200814,0.00022723913],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000097162534,0.00022027234,0.00018691873,0.00013773823,0.00014481069,0.00002711553,0.00020290258,0.000075606265,0.00016877236],"category_scores_gemma":[0.0005370525,0.00022726352,0.0001276294,0.0003929522,0.00015116308,0.000014656963,0.00017124625,0.00007784311,0.000018113486],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00031863333,0.00054651656,0.46991888,0.00034153447,0.00011360444,0.00001032754,0.000053498425,0.001194118,0.5083594,0.000041523155,0.0005236817,0.018578319],"study_design_scores_gemma":[0.005364578,0.0019860219,0.8069451,0.0013161466,0.0003944122,0.000021165612,0.00011178469,0.0076283123,0.1547773,0.00039349237,0.019301642,0.0017600483],"about_ca_topic_score_codex":0.000055895696,"about_ca_topic_score_gemma":0.00015520884,"teacher_disagreement_score":0.35358208,"about_ca_system_score_codex":0.0000443424,"about_ca_system_score_gemma":0.00028009343,"threshold_uncertainty_score":0.9267537},"labels":[],"label_agreement":null},{"id":"W2901870848","doi":"10.3201/eid2501.180267","title":"Isolation and Full-Genome Characterization of Nipah Viruses from Bats, Bangladesh","year":2018,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Virology and Viral Diseases","field":"Medicine","cited_by":56,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"National Medical Research Council; National Research Foundation; Medical Research Council; Fogarty International Center; United States Agency for International Development; National Institutes of Health; National Science Foundation","keywords":"Virology; Virus isolation; Biology; Isolation (microbiology); Genome; Virus; Serology; Genetics; Microbiology; Gene; Antibody","score_opus":0.010912504928982786,"score_gpt":0.26304165170390614,"score_spread":0.2521291467749234,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2901870848","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9974663,0.00048545096,0.0008558593,0.000120913435,0.00021285018,0.0001804042,0.0002194763,0.00014176479,0.000316926],"genre_scores_gemma":[0.998224,0.00012317726,0.00003092616,0.0006580277,0.00054291374,0.000015018642,0.00034004138,0.00001960061,0.000046261306],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99923456,0.000051806768,0.00021723134,0.00023276193,0.0001146572,0.00014895886],"domain_scores_gemma":[0.99943334,0.000038840666,0.000120386605,0.00017830117,0.00009955479,0.00012959028],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000035367048,0.0001337708,0.00022298603,0.00013042838,0.00013784139,0.000013481775,0.000035018224,0.000071192,0.0007957896],"category_scores_gemma":[0.00012705251,0.0001268137,0.000066005654,0.00015351339,0.00018810686,0.00018190342,0.000034110915,0.000058580266,0.000041660678],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00033467566,0.00021212296,0.6518765,0.00005526625,0.00010996814,0.000004404337,0.00019728548,0.0000015704686,0.34577194,0.00008385626,0.00007639168,0.0012760129],"study_design_scores_gemma":[0.0008190965,0.0005029527,0.9947201,0.00006007567,0.00034624623,0.0000062802765,0.000025610321,0.0002737581,0.0016977156,0.0003073357,0.0011183509,0.00012248929],"about_ca_topic_score_codex":0.00006771405,"about_ca_topic_score_gemma":0.000020932375,"teacher_disagreement_score":0.34407422,"about_ca_system_score_codex":0.00001899169,"about_ca_system_score_gemma":0.00004180951,"threshold_uncertainty_score":0.87133384},"labels":[],"label_agreement":null},{"id":"W2906951132","doi":"10.3201/eid2502.180299","title":"<i>Echinococcus multilocularis</i>Infection, Southern Ontario, Canada","year":2019,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Parasitic infections in humans and animals","field":"Medicine","cited_by":60,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of Guelph","funders":"Natural Sciences and Engineering Research Council of Canada; Bayer Animal Health; Ministry of Natural Resources; Canadian Wildlife Health Cooperative; Wellcome Trust; National Center for Veterinary Parasitology; Ontario Ministry of Natural Resources and Forestry","keywords":"Echinococcus multilocularis; Alveolar echinococcosis; Veterinary medicine; Echinococcosis; Biology; Feces; Population; Cestoda; Echinococcus; Zoology; Helminths; Medicine; Ecology; Environmental health","score_opus":0.005823844359886045,"score_gpt":0.23823611597805763,"score_spread":0.2324122716181716,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2906951132","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9740391,0.00020082519,0.00020977978,0.00008525543,0.0012701143,0.00049982476,0.00002779294,0.00032907992,0.023338221],"genre_scores_gemma":[0.9874379,0.000013209554,0.00003497995,0.0007564062,0.00028302844,0.000049266288,0.00004458748,0.00004597839,0.011334645],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9984522,0.00004502651,0.00032338742,0.0004160888,0.00034311746,0.00042020323],"domain_scores_gemma":[0.99897623,0.000054411543,0.00010826845,0.0004417058,0.00017141963,0.0002479491],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00008721404,0.00027717155,0.00037421388,0.00015605654,0.0003117896,0.000047424786,0.00006339672,0.000079377474,0.0052673994],"category_scores_gemma":[0.00007590852,0.00026071444,0.00022477852,0.00024232401,0.000046251957,0.00010377297,0.00003999678,0.0003131702,0.0004124259],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000030917152,0.00024798812,0.99318963,0.00009725238,0.00017357242,0.000042732172,0.00023192208,0.00046654468,0.0003367371,0.00021637455,0.0041744374,0.0007919184],"study_design_scores_gemma":[0.0019904387,0.000245037,0.8898916,0.00017047879,0.00036645203,0.00017860069,0.000115231,0.00033852135,0.00025708613,0.00021537779,0.1057421,0.0004890556],"about_ca_topic_score_codex":0.9573791,"about_ca_topic_score_gemma":0.9242192,"teacher_disagreement_score":0.10329798,"about_ca_system_score_codex":0.0007639551,"about_ca_system_score_gemma":0.0011254784,"threshold_uncertainty_score":0.9999845},"labels":[],"label_agreement":null},{"id":"W2907318817","doi":"10.3201/eid2502.180771","title":"Lyme Disease Emergence after Invasion of the Blacklegged Tick,<i>Ixodes scapularis</i>, Ontario, Canada, 2010–2016","year":2019,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Vector-borne infectious diseases","field":"Immunology and Microbiology","cited_by":47,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"Canadian Institutes of Health Research","keywords":"Ixodes scapularis; Lyme disease; Ixodes; Borrelia burgdorferi; Tick; Tick-borne disease; Incidence (geometry); Biology; Virology; Medicine; Ixodidae; Immunology; Antibody","score_opus":0.004413381360938305,"score_gpt":0.19207423981277663,"score_spread":0.18766085845183833,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2907318817","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98697704,0.0052854377,0.000018754847,0.00022046699,0.0052231904,0.00074476085,0.000330482,0.00018024835,0.0010196154],"genre_scores_gemma":[0.9919535,0.00008169712,0.0000021138517,0.0005810225,0.00007719975,0.00012820632,0.00009420726,0.000059962655,0.007022095],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9974203,0.0003618985,0.0006015479,0.00067792606,0.00023668351,0.0007016306],"domain_scores_gemma":[0.99789137,0.00018372048,0.0003589622,0.0011510751,0.0002275304,0.00018734162],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00011992211,0.0004806601,0.0005092377,0.00015665556,0.0003788289,0.000030865336,0.0004995183,0.00015278542,0.011808267],"category_scores_gemma":[0.0003058089,0.00037678998,0.0004346511,0.00040008756,0.00031517303,0.0002506586,0.00034579195,0.00037490923,0.00043726616],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002369335,0.00045213228,0.9601039,0.00011919863,0.00035473506,0.000013892219,0.00021314864,0.0004290008,0.0067821504,0.0001105203,0.03096113,0.00022323574],"study_design_scores_gemma":[0.0011357202,0.00008978986,0.980795,0.0002187006,0.00047547507,0.000015757856,0.00006741046,0.000011175759,0.0028841873,0.00024098087,0.013558661,0.0005071374],"about_ca_topic_score_codex":0.7006283,"about_ca_topic_score_gemma":0.75150925,"teacher_disagreement_score":0.050880972,"about_ca_system_score_codex":0.0004065579,"about_ca_system_score_gemma":0.002467864,"threshold_uncertainty_score":0.9998684},"labels":[],"label_agreement":null},{"id":"W2912100687","doi":"10.3201/eid2503.180336","title":"<i>Mycobacterium avium</i> in Community and Household Water, Suburban Philadelphia, Pennsylvania, USA, 2010<i>–</i>2012","year":2019,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Mycobacterium research and diagnosis","field":"Medicine","cited_by":70,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba; University of Regina","funders":"","keywords":"Mycobacterium avium complex; Genotyping; Mycobacterium avium-intracellulare infection; Genotype; Biology; Mycobacterium; Colonization; Nontuberculous mycobacteria; Microbiology; Bacteria; Gene; Genetics","score_opus":0.017390460483307092,"score_gpt":0.26189164082764455,"score_spread":0.24450118034433746,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2912100687","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99345875,0.0011413953,0.000005816039,0.0011352242,0.0006046752,0.0007408373,0.000108463646,0.00021183908,0.0025929736],"genre_scores_gemma":[0.99641603,0.00093147263,0.000012117108,0.0010132898,0.00024773597,0.00010510125,0.00016794889,0.00007131241,0.001034999],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99758554,0.00030978996,0.00041300178,0.0004321593,0.00040379135,0.00085574575],"domain_scores_gemma":[0.9981417,0.00027023783,0.000074641284,0.00078559335,0.000100825135,0.0006270015],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00039183465,0.0003633779,0.00058523,0.0004106484,0.00024356156,0.00011527832,0.00018413871,0.00014080016,0.001977745],"category_scores_gemma":[0.00017296447,0.00030277914,0.00016300533,0.0003073228,0.00014601348,0.0005513207,0.00028951545,0.0007685048,0.00053367135],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00022417412,0.0009182056,0.97726905,0.00056259864,0.00006485814,0.00006101181,0.00034868324,0.00001153699,0.012575973,0.000027275652,0.007540529,0.00039611087],"study_design_scores_gemma":[0.0032986952,0.00062106794,0.983259,0.00025630838,0.00012822967,0.00009979162,0.0001227974,0.000039148727,0.0018106011,0.00015880575,0.009794547,0.00041097184],"about_ca_topic_score_codex":0.0040756543,"about_ca_topic_score_gemma":0.00070317043,"teacher_disagreement_score":0.010765372,"about_ca_system_score_codex":0.00014234101,"about_ca_system_score_gemma":0.000095796175,"threshold_uncertainty_score":0.9999424},"labels":[],"label_agreement":null},{"id":"W2919747718","doi":"10.3201/eid2504.180743","title":"Epizootic Hemorrhagic Disease in White-Tailed Deer, Canada","year":2019,"lang":"en","type":"letter","venue":"Emerging infectious diseases","topic":"Vector-Borne Animal Diseases","field":"Agricultural and Biological Sciences","cited_by":33,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of Guelph; Canadian Food Inspection Agency","funders":"Ministry of Agriculture, Food and Rural Affairs; Ontario Ministry of Agriculture, Food and Rural Affairs; University of Guelph","keywords":"White (mutation); Epizootic; Disease; Virology; Medicine; Geography; Biology; Outbreak; Pathology","score_opus":0.007656575755161768,"score_gpt":0.19343245178472307,"score_spread":0.1857758760295613,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2919747718","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.82047695,0.004439273,6.8731686e-7,0.16780104,0.0018409381,0.001184117,0.0023394895,0.0005396834,0.0013778469],"genre_scores_gemma":[0.781752,0.00009160801,0.0000012975449,0.2109713,0.0028468776,0.0001513372,0.0023559122,0.000017339165,0.0018123166],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9959149,0.00031570336,0.00059206475,0.0011599347,0.00086347066,0.0011539791],"domain_scores_gemma":[0.99828345,0.0005539918,0.00030316753,0.00031097428,0.0001410761,0.00040733223],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.000074650634,0.0007891676,0.0007807348,0.00010041169,0.00025041954,0.00018794133,0.00066484633,0.00031907886,0.0034054979],"category_scores_gemma":[0.00046910226,0.00040289358,0.0004371024,0.0008316649,0.00008067196,0.00022036272,0.00021279599,0.0009544869,0.00024652755],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000025090876,0.000106308085,0.54381967,0.00016173813,0.000036358786,0.00090827025,0.0000043535406,0.00018140445,0.000022800465,0.0000033437846,0.45402104,0.0007096499],"study_design_scores_gemma":[0.0002631315,0.00009203835,0.68537486,0.00017175582,0.00019844991,0.0000057224142,0.000016831871,0.00015237973,0.0000013976431,0.0001140061,0.31271172,0.00089768367],"about_ca_topic_score_codex":0.18249515,"about_ca_topic_score_gemma":0.48524085,"teacher_disagreement_score":0.3027457,"about_ca_system_score_codex":0.0006101831,"about_ca_system_score_gemma":0.0005961052,"threshold_uncertainty_score":0.9998423},"labels":[],"label_agreement":null},{"id":"W2947852805","doi":"10.3201/eid2508.190281","title":"Evaluating Temperature Sensitivity of Vesicular Stomatitis Virus–Based Vaccines","year":2019,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Viral Infections and Outbreaks Research","field":"Medicine","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Public Health Agency; Public Health Agency of Canada","keywords":"Vesicular stomatitis virus; Virology; Vesicular Stomatitis; Lassa virus; Vesicular stomatitis Indiana virus; Ebola virus; Virus; Outbreak; Biology","score_opus":0.016178077104771177,"score_gpt":0.3431784056821682,"score_spread":0.327000328577397,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2947852805","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9969645,0.00035118492,0.0001552333,0.00019058038,0.00026113965,0.00052344636,0.00004315345,0.00020385506,0.0013069112],"genre_scores_gemma":[0.9990904,0.000026724923,0.00009108331,0.00023017565,0.00017167845,0.000027716738,0.000055075197,0.000033429355,0.00027374006],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99849796,0.00022416476,0.0002642691,0.00029623715,0.00044105473,0.00027632283],"domain_scores_gemma":[0.9988421,0.00019269717,0.00010338069,0.0003466617,0.00036147377,0.00015366421],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00035993112,0.00018285966,0.0003798861,0.0002733383,0.00014348686,0.00003145696,0.00003638672,0.00008061977,0.00089716323],"category_scores_gemma":[0.000406081,0.00015829621,0.00023970555,0.0005204367,0.000042736636,0.00013704872,0.000044150354,0.00021078587,0.00009729425],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010092248,0.00054768886,0.5868119,0.00059606374,0.00016524378,0.000045751694,0.000045639987,0.0044986024,0.4003322,0.00008251706,0.00076048914,0.0060129524],"study_design_scores_gemma":[0.003806818,0.0014356372,0.8605082,0.0006738565,0.00041549103,0.000109545916,0.00009515887,0.05191056,0.07970105,0.000077191886,0.0008441613,0.0004223114],"about_ca_topic_score_codex":0.000560853,"about_ca_topic_score_gemma":0.00005433032,"teacher_disagreement_score":0.32063118,"about_ca_system_score_codex":0.000082003564,"about_ca_system_score_gemma":0.0002040666,"threshold_uncertainty_score":0.9823308},"labels":[],"label_agreement":null},{"id":"W2948848136","doi":"10.3201/eid2508.190399","title":"Polio-Like Manifestation of Powassan Virus Infection with Anterior Horn Cell Involvement, Canada","year":2019,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Viral Infections and Vectors","field":"Medicine","cited_by":9,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of Ottawa","funders":"","keywords":"Spinal cord; Acute anterior poliomyelitis; Poliomyelitis; Anterior Horn Cell; Virus; Virology; Biology; Medicine; Pathology; Viral disease","score_opus":0.005375946947781516,"score_gpt":0.22878822750011332,"score_spread":0.2234122805523318,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2948848136","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9943132,0.00013860235,0.0001829882,0.000046253645,0.0007291857,0.0005037627,0.000044198667,0.0001510962,0.0038907568],"genre_scores_gemma":[0.9987096,0.00013033109,0.000014572091,0.00027242626,0.00011533656,0.00003249568,0.000070813294,0.00004216801,0.00061226415],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99874526,0.00005418993,0.0003139825,0.00029220668,0.0003132354,0.0002810933],"domain_scores_gemma":[0.99910444,0.000030802432,0.00022053938,0.00029210775,0.00017815658,0.000173959],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00006651128,0.00022499563,0.00032340002,0.00028885415,0.00012896261,0.00002356495,0.000039603554,0.00005215848,0.0004449227],"category_scores_gemma":[0.000019741112,0.00019499574,0.000109534034,0.00048982253,0.000044403998,0.0001900927,0.000027380087,0.00014202645,0.000022941214],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011580852,0.00040151062,0.98837054,0.0003937212,0.0001243906,0.000016229946,0.0000731565,0.0005310185,0.0080773905,0.000036896672,0.0012890465,0.00057029654],"study_design_scores_gemma":[0.0026474535,0.0017828541,0.9780401,0.0003146543,0.00042315433,0.00006655104,0.0002121209,0.00045888577,0.008142184,0.000023693525,0.00749994,0.00038842348],"about_ca_topic_score_codex":0.49198285,"about_ca_topic_score_gemma":0.30413812,"teacher_disagreement_score":0.18784472,"about_ca_system_score_codex":0.00030247058,"about_ca_system_score_gemma":0.00045893417,"threshold_uncertainty_score":0.79516953},"labels":[],"label_agreement":null},{"id":"W2952127018","doi":"10.3201/eid2507.181447","title":"Mitochondrial Junction Region as Genotyping Marker for <i>Cyclospora cayetanensis</i>","year":2019,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Parasitic Infections and Diagnostics","field":"Immunology and Microbiology","cited_by":32,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"Centers for Disease Control and Prevention","keywords":"Cyclospora cayetanensis; Outbreak; Genotyping; Cyclospora; Multilocus sequence typing; Typing; Biology; Sanger sequencing; Virology; Microbiology; Genetics; Genotype; Cryptosporidium; DNA sequencing; Gene; Feces","score_opus":0.00560380170947584,"score_gpt":0.23561588675142692,"score_spread":0.2300120850419511,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2952127018","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9745435,0.0012643817,0.0041779745,0.00017966461,0.010795869,0.00086919294,0.000039461374,0.00041115793,0.0077187777],"genre_scores_gemma":[0.99463564,0.00009261509,0.00003545281,0.00046126204,0.00034537964,0.00012580852,0.0002467289,0.00003810827,0.0040189866],"study_design_codex":"observational","study_design_gemma":"not_applicable","domain_scores_codex":[0.9987834,0.0000894672,0.0002767986,0.00039547138,0.000043824683,0.0004110058],"domain_scores_gemma":[0.9989795,0.00035594671,0.00014220925,0.00031969335,0.00015568352,0.00004694559],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00006677846,0.00022778637,0.00027914837,0.00016594131,0.0004046151,0.000035201858,0.00008117043,0.00019356832,0.0009164924],"category_scores_gemma":[0.00037651774,0.00022741045,0.0002362992,0.00017764562,0.000074000694,0.0001527807,0.00003500918,0.00015664943,0.0014972328],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0012307094,0.0010785661,0.7785791,0.0002487475,0.0010518036,0.00003107731,0.0003830829,0.0019745578,0.0632866,0.010215375,0.13187209,0.010048253],"study_design_scores_gemma":[0.010516258,0.001333992,0.15090221,0.00027104854,0.0012791904,0.0008181022,0.00042310066,0.0002344898,0.010770728,0.006142289,0.8156608,0.0016477981],"about_ca_topic_score_codex":0.00033084385,"about_ca_topic_score_gemma":0.00002735774,"teacher_disagreement_score":0.6837887,"about_ca_system_score_codex":0.00009167391,"about_ca_system_score_gemma":0.00009455704,"threshold_uncertainty_score":0.9999968},"labels":[],"label_agreement":null},{"id":"W2954735866","doi":"10.3201/eid2508.190222","title":"Direct Medical Costs of 3 Reportable Travel-Related Infections in Ontario, Canada, 2012–2014","year":2019,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Travel-related health issues","field":"Medicine","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Public Health Ontario; Women's College Hospital; University of Toronto","funders":"","keywords":"Malaria; Environmental health; Medicine; Health care; Public health; Epidemiology; Immigration; Indirect costs; Business; Geography; Economic growth; Immunology","score_opus":0.006156123115295333,"score_gpt":0.2582664426500032,"score_spread":0.25211031953470786,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2954735866","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.94911605,0.0013636678,0.000011577863,0.0004973799,0.0013564337,0.0007243395,0.000020948015,0.00016849702,0.046741106],"genre_scores_gemma":[0.99426013,0.00015400036,0.000009164274,0.00029712345,0.000056830802,0.000046304343,0.0000967698,0.00005058423,0.005029105],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99707556,0.00011630074,0.0009986265,0.00046514446,0.00077758206,0.0005667792],"domain_scores_gemma":[0.9981883,0.00025556798,0.0003044197,0.0005039085,0.00017465615,0.0005731242],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00034406694,0.00027656695,0.0007671779,0.00039418857,0.00009797924,0.000009384639,0.00009828672,0.00024536718,0.010952804],"category_scores_gemma":[0.00056480785,0.00027298232,0.00014370387,0.00056811486,0.000081308695,0.0001491108,0.000042536856,0.00069613487,0.00008748012],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000056625297,0.0005982279,0.98637676,0.00017692495,0.00017389044,0.00020554758,0.0002611196,0.00042685433,0.00009603324,0.0002252221,0.010926731,0.00047603555],"study_design_scores_gemma":[0.0027348527,0.0003288901,0.9826743,0.0008477298,0.00019615589,0.00021765131,0.00008782947,0.00021959575,0.00015761355,0.000056929435,0.012195054,0.00028337826],"about_ca_topic_score_codex":0.9785074,"about_ca_topic_score_gemma":0.9888768,"teacher_disagreement_score":0.04514407,"about_ca_system_score_codex":0.0014356439,"about_ca_system_score_gemma":0.00553392,"threshold_uncertainty_score":0.9999722},"labels":[],"label_agreement":null},{"id":"W2963605210","doi":"10.3201/eid2509.181884","title":"Climate Classification System–Based Determination of Temperate Climate Detection of<i>Cryptococcus gattii</i>sensu lato","year":2019,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Fungal Infections and Studies","field":"Medicine","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"Natural Sciences and Engineering Research Council of Canada; Killam Trusts","keywords":"Sensu; Cryptococcus gattii; Temperate climate; Outbreak; Ecology; Biology; Geography; Cryptococcus; Virology; Microbiology","score_opus":0.01029568418977749,"score_gpt":0.2666441109385802,"score_spread":0.2563484267488027,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2963605210","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99440855,0.0002690765,0.0007947058,0.00003561666,0.00068640057,0.00084009237,0.00008270068,0.00028868517,0.0025941455],"genre_scores_gemma":[0.999441,0.00014224857,0.000075864606,0.000031130625,0.000087383654,0.000117061434,0.00004341501,0.000035554636,0.000026289334],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99842405,0.00010099304,0.0005894271,0.0003179396,0.0002804482,0.0002871233],"domain_scores_gemma":[0.9985212,0.00012199421,0.00042184195,0.0003764715,0.00046582526,0.00009264866],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00021731833,0.0002188878,0.00049182604,0.00038527654,0.0002031999,0.000018495568,0.000046259058,0.00009365358,0.00004672443],"category_scores_gemma":[0.00011713223,0.00020108494,0.00024634934,0.0004973235,0.00008050892,0.00014269185,0.000034407552,0.00012131144,0.000059829094],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00025329523,0.0004528469,0.79158205,0.0034742723,0.00009764977,0.0000031805712,0.00011406078,0.00042306795,0.1985293,0.00071792724,0.000021685802,0.004330675],"study_design_scores_gemma":[0.003651809,0.001402366,0.86188424,0.0016239543,0.0009353072,0.000043869863,0.0010186417,0.043983895,0.08449661,0.000031169508,0.0004560042,0.00047215808],"about_ca_topic_score_codex":0.00006488652,"about_ca_topic_score_gemma":0.000021043055,"teacher_disagreement_score":0.1140327,"about_ca_system_score_codex":0.00015264413,"about_ca_system_score_gemma":0.000057372206,"threshold_uncertainty_score":0.8200006},"labels":[],"label_agreement":null},{"id":"W2972104344","doi":"10.3201/eid2510.190196","title":"Emergence and Containment of Canine Influenza Virus A(H3N2), Ontario, Canada, 2017–2018","year":2019,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Influenza Virus Research Studies","field":"Medicine","cited_by":25,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"OVC Pet Trust","keywords":"Outbreak; Medicine; Transmission (telecommunications); Isolation (microbiology); Population; Virology; Contact tracing; Virus isolation; Virus; Viral shedding; Veterinary medicine; Coronavirus disease 2019 (COVID-19); Internal medicine; Disease; Environmental health; Biology; Infectious disease (medical specialty); Microbiology","score_opus":0.023744265809990343,"score_gpt":0.3084759308809402,"score_spread":0.2847316650709499,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2972104344","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98881745,0.003557608,0.000006871377,0.00013840885,0.00037155097,0.00061509974,0.00012015415,0.00005895722,0.0063139037],"genre_scores_gemma":[0.9971714,0.0002990847,0.000020567302,0.0009397715,0.00007586628,0.00004739681,0.00001260893,0.000026128979,0.0014071793],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9981258,0.000045159344,0.00039507836,0.00035693267,0.00061836647,0.00045869613],"domain_scores_gemma":[0.9988165,0.00009458378,0.00014751666,0.0003939605,0.00023953356,0.00030791975],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.000119281176,0.0002480749,0.00049595686,0.00014966128,0.00015793629,0.000013207218,0.00009271488,0.000047534475,0.0022599874],"category_scores_gemma":[0.00023986502,0.00022434475,0.0000870411,0.00019895412,0.00014222997,0.000116039395,0.00016422097,0.00020436973,0.000028670527],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00021417454,0.00015266954,0.9735267,0.000283507,0.00036369782,0.00004505652,0.00052867184,0.0001947266,0.002118149,0.00011007491,0.02189748,0.0005650993],"study_design_scores_gemma":[0.002329619,0.0005472311,0.9375579,0.00019038448,0.00021142495,0.000023944718,0.000418422,0.0001107035,0.0009563106,0.000045614397,0.057304967,0.00030347268],"about_ca_topic_score_codex":0.9349374,"about_ca_topic_score_gemma":0.9387806,"teacher_disagreement_score":0.03596879,"about_ca_system_score_codex":0.0004959162,"about_ca_system_score_gemma":0.0013544102,"threshold_uncertainty_score":0.9986521},"labels":[],"label_agreement":null},{"id":"W2978978722","doi":"10.3201/eid2511.190522","title":"Isolation of <i>Legionella pneumophila</i> by Co-culture with Local Ameba, Canada","year":2019,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Legionella and Acanthamoeba research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":12,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of Toronto; University of Alberta; Alberta Health Services","funders":"Alberta Innovates","keywords":"Legionella pneumophila; Microbiology; Isolation (microbiology); Legionella; Amoeba (genus); Legionnaires' disease; Biology; Bacteria; Genetics","score_opus":0.0024378180310481354,"score_gpt":0.2153736705020397,"score_spread":0.21293585247099156,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2978978722","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99498487,0.0007529806,0.0008327152,0.00013388929,0.00011005156,0.00018066441,0.00008893934,0.000017115332,0.0028987858],"genre_scores_gemma":[0.9980402,0.0001354312,0.000007943996,0.00026256696,0.00010240604,0.00001110295,0.00036073808,0.000021754817,0.0010578489],"study_design_codex":"observational","study_design_gemma":"not_applicable","domain_scores_codex":[0.9990845,0.00003608051,0.0001363039,0.00027045942,0.00024707156,0.00022560605],"domain_scores_gemma":[0.99941623,0.000010564672,0.000079486774,0.00023756703,0.0001428482,0.000113288],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000032875654,0.0001423989,0.00014263038,0.000028848786,0.0000822005,0.000014432334,0.00010802753,0.000064489745,0.00002077628],"category_scores_gemma":[0.000017117813,0.00011760299,0.00004853412,0.00014867309,0.00008424001,0.000006851747,0.000035535413,0.00008267634,0.000007161595],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00021022484,0.00019027955,0.52430665,0.00013795916,0.00016911107,0.000009128451,0.000056762194,0.0038914618,0.31603372,0.000054460583,0.15445885,0.0004813928],"study_design_scores_gemma":[0.0060025062,0.0031558624,0.035054803,0.00021540766,0.0002073798,0.00011493865,0.0011122598,0.002065192,0.44651726,0.00010966779,0.503605,0.001839712],"about_ca_topic_score_codex":0.026382728,"about_ca_topic_score_gemma":0.01472328,"teacher_disagreement_score":0.48925185,"about_ca_system_score_codex":0.00003879385,"about_ca_system_score_gemma":0.00035303066,"threshold_uncertainty_score":0.9801007},"labels":[],"label_agreement":null},{"id":"W2980431881","doi":"10.3201/eid2406.171587","title":"Frequent Implication of Multistress-Tolerant<i>Campylobacter jejuni</i>in Human Infections","year":2018,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Salmonella and Campylobacter epidemiology","field":"Agricultural and Biological Sciences","cited_by":39,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Public Health Agency of Canada; Provincial Laboratory of Public Health; University of Alberta","funders":"Alberta Agriculture and Forestry","keywords":"Campylobacter jejuni; Biology; Campylobacteriosis; Microbiology; Campylobacter; Population; Clade; Genetics; Bacteria; Gene; Phylogenetics; Medicine","score_opus":0.01413072809576233,"score_gpt":0.274216216364253,"score_spread":0.26008548826849065,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2980431881","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9967176,0.00013339394,0.00002198976,0.00021233535,0.0002554936,0.0001862402,0.00006347118,0.00013924089,0.0022702345],"genre_scores_gemma":[0.99916226,0.000039683535,0.000008150989,0.00016412014,0.00042153904,0.000048756006,0.000109690845,0.0000021650244,0.000043610424],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9986972,0.00015297225,0.000394917,0.00033259855,0.000108442226,0.00031383793],"domain_scores_gemma":[0.9992988,0.00017859094,0.00017944946,0.00012053765,0.00011765149,0.00010494922],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012880689,0.00016442564,0.00025630434,0.00004963799,0.00023423386,0.000020595879,0.00015661662,0.00009184226,0.00083632657],"category_scores_gemma":[0.00010439421,0.00008328931,0.000134416,0.00043947424,0.00017578196,0.00011865937,0.00005652378,0.00009508384,0.000037665955],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000009053582,0.00044951006,0.9007641,0.000009090103,0.000017899603,0.0000018616946,0.00005730669,0.000021030366,0.091048,0.0006002918,0.00037371778,0.0066481344],"study_design_scores_gemma":[0.00023177061,0.00034803743,0.99174577,0.000032914693,0.0000234765,0.00000973049,0.000045350753,0.000048037622,0.0021611678,0.0019396894,0.0032352586,0.00017879132],"about_ca_topic_score_codex":0.0023964476,"about_ca_topic_score_gemma":0.002836785,"teacher_disagreement_score":0.09098167,"about_ca_system_score_codex":0.000048275928,"about_ca_system_score_gemma":0.000009090515,"threshold_uncertainty_score":0.9157189},"labels":[],"label_agreement":null},{"id":"W2996431848","doi":"10.3201/eid2601.191241","title":"Phenotypic and Genotypic Correlates of Penicillin Susceptibility in Nontoxigenic <i>Corynebacterium diphtheriae</i>, British Columbia, Canada, 2015–2018","year":2019,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Diphtheria, Corynebacterium, and Tetanus","field":"Biochemistry, Genetics and Molecular Biology","cited_by":20,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"BC Children's Hospital; University of British Columbia","funders":"","keywords":"Corynebacterium diphtheriae; Multilocus sequence typing; Penicillin; Biology; Microbiology; Genotype; Whole genome sequencing; Antibiotic resistance; Typing; Diphtheria; Antibiotics; Genetics; Virology; Genome; Gene; Vaccination","score_opus":0.0026237607318393853,"score_gpt":0.19160302415345273,"score_spread":0.18897926342161334,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2996431848","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99482703,0.0029781784,0.000013672026,0.000014356339,0.0008430851,0.00041063235,0.00020687816,0.000029216353,0.00067695207],"genre_scores_gemma":[0.99799305,0.00032647757,0.000012885207,0.00010242574,0.00011840493,0.000027063232,0.00014506445,0.000046489182,0.0012281479],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9982815,0.00012812205,0.0004259753,0.00058108993,0.00017777144,0.0004055483],"domain_scores_gemma":[0.99901,0.000038549897,0.00018516488,0.00049075123,0.00011790615,0.00015759439],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0001495481,0.00021725264,0.00038908925,0.000036038917,0.00008426009,0.00008551933,0.00018460427,0.00014537279,0.00058947474],"category_scores_gemma":[0.00011927848,0.0003142266,0.00011171893,0.00014525169,0.00012922708,0.000019079067,0.00013894157,0.00012621887,0.000007714549],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007417908,0.00018583424,0.9449024,0.00012465303,0.00008212212,0.000008823527,0.00005941717,0.00005209805,0.051942915,0.000002118056,0.00079374993,0.0017716447],"study_design_scores_gemma":[0.0012309337,0.00031977764,0.9925805,0.00006446579,0.00006147738,0.000027793705,0.00011253538,0.00003961854,0.0008636185,0.000075520344,0.0042017,0.0004220603],"about_ca_topic_score_codex":0.46989492,"about_ca_topic_score_gemma":0.9244171,"teacher_disagreement_score":0.45452216,"about_ca_system_score_codex":0.00008281956,"about_ca_system_score_gemma":0.00039295293,"threshold_uncertainty_score":0.999931},"labels":[],"label_agreement":null},{"id":"W2999049795","doi":"10.3201/eid2603.191232","title":"Need for BCG Vaccination to Prevent TB in High-Incidence Countries and Populations","year":2020,"lang":"en","type":"letter","venue":"Emerging infectious diseases","topic":"Tuberculosis Research and Epidemiology","field":"Medicine","cited_by":15,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Tuberculosis; Vaccination; Public health; Developing country; BCG vaccine; Quarter (Canadian coin); Environmental health; Medicine; Incidence (geometry); Global health; Mycobacterium tuberculosis; Economic growth; Immunology; Geography; Nursing","score_opus":0.024824353564228407,"score_gpt":0.34376214456052073,"score_spread":0.3189377909962923,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2999049795","genre_codex":"commentary","genre_gemma":"commentary","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"commentary","genre_consensus":"commentary","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.08653573,0.0010183704,0.00074492313,0.90901333,0.00039278113,0.0018233783,0.00022723024,0.00016636819,0.00007787501],"genre_scores_gemma":[0.37244958,0.0004715149,0.0002502599,0.621317,0.0026462947,0.0009869392,0.0013751916,0.00007062717,0.00043255283],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99825287,0.00015127976,0.00039822236,0.00048906694,0.00026034834,0.00044823572],"domain_scores_gemma":[0.9988237,0.0004586322,0.00010767871,0.00022208864,0.00015511387,0.00023275612],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014127606,0.0002496154,0.00057456916,0.000455463,0.00014921029,0.00003851112,0.00008020323,0.00020913656,0.00012379086],"category_scores_gemma":[0.0027013647,0.00023804435,0.00012088713,0.00029097334,0.000030883766,0.000102676044,0.00007468522,0.0004984918,0.000027485132],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007721364,0.00006090407,0.18726918,0.00067439454,0.000071293594,0.000083578474,0.000079746904,0.00013208763,0.000011823879,0.00013438286,0.81048566,0.0009197517],"study_design_scores_gemma":[0.0014850652,0.00081452803,0.47669414,0.00046938952,0.0004142754,0.0000412383,0.000032488595,0.0013586092,0.00001696331,0.0042521628,0.5139511,0.000469998],"about_ca_topic_score_codex":0.0009607614,"about_ca_topic_score_gemma":0.00037005974,"teacher_disagreement_score":0.2965345,"about_ca_system_score_codex":0.00025838526,"about_ca_system_score_gemma":0.00016388812,"threshold_uncertainty_score":0.97071666},"labels":[],"label_agreement":null},{"id":"W3000337579","doi":"10.3201/eid2603.190997","title":"Improving Quality of Patient Data for Treatment of Multidrug- or Rifampin-Resistant Tuberculosis","year":2020,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Tuberculosis Research and Epidemiology","field":"Medicine","cited_by":10,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; McGill University Health Centre","funders":"World Health Organization","keywords":"Observational study; Tuberculosis; Medicine; Intensive care medicine; Multiple drug resistance; Antibiotics; Internal medicine; Pathology; Biology; Microbiology","score_opus":0.08913036099128868,"score_gpt":0.3928432853628179,"score_spread":0.3037129243715292,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3000337579","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9930813,0.0013477074,0.0006854492,0.0018365898,0.00016124042,0.00095881906,0.0017341899,0.0000917148,0.000103027014],"genre_scores_gemma":[0.9978919,0.00041954994,0.0005854261,0.00029892687,0.00017413001,0.0001074094,0.00048111187,0.000027140415,0.00001438085],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9980413,0.00018342414,0.0007113172,0.00046352556,0.00024823958,0.00035222401],"domain_scores_gemma":[0.99752235,0.0009564397,0.00028029265,0.0006727564,0.00018954638,0.0003786022],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00017874509,0.00019380184,0.00078883354,0.000093178416,0.000080386846,0.0000057757043,0.00013426685,0.00005969762,0.00010100727],"category_scores_gemma":[0.0065398314,0.00013768517,0.000264265,0.00022384546,0.00011239208,0.00008929443,0.00012182252,0.00004758915,0.000003567924],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.012688005,0.0054829004,0.7731305,0.005510265,0.0024695762,0.000033653865,0.001487037,0.00046656403,0.07247696,0.00022386387,0.009510619,0.116520055],"study_design_scores_gemma":[0.038093586,0.05104203,0.6878126,0.00082749454,0.0050590117,0.000026211017,0.0035601237,0.091436155,0.049910728,0.00025412827,0.070105106,0.0018727952],"about_ca_topic_score_codex":0.0030235974,"about_ca_topic_score_gemma":0.00018974625,"teacher_disagreement_score":0.11464726,"about_ca_system_score_codex":0.0000975524,"about_ca_system_score_gemma":0.00021830144,"threshold_uncertainty_score":0.78292614},"labels":[],"label_agreement":null},{"id":"W3005509359","doi":"10.3201/eid2603.190160","title":"Randomized Trial of 2 Schedules of Meningococcal B Vaccine in Adolescents and Young Adults, Canada1","year":2020,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Université de Montréal; Nova Scotia Health Authority; McGill University Health Centre; University of Calgary; University of British Columbia; Izaak Walton Killam Health Centre; Dalhousie University","funders":"Canadian Institutes of Health Research; Public Health Agency; Public Health Agency of Canada","keywords":"Medicine; Vaccination; Immunogenicity; Reactogenicity; Tolerability; Meningococcal disease; Titer; Meningococcal vaccine; Randomized controlled trial; Adverse effect; Outbreak; Neisseria meningitidis; Immunization; Pediatrics; Internal medicine; Immunology; Virology; Antibody; Biology","score_opus":0.007232649232643531,"score_gpt":0.23545130362078573,"score_spread":0.2282186543881422,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3005509359","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9966125,0.0017736886,0.000036045763,0.000110220695,0.0008184533,0.00051256455,0.000036170833,0.000043144653,0.000057211968],"genre_scores_gemma":[0.99960154,0.00021354434,0.0000055059677,0.000023398274,0.00007056089,0.00003960005,0.0000255337,0.00001142296,0.000008904998],"study_design_codex":"randomized_trial","study_design_gemma":"randomized_trial","domain_scores_codex":[0.99891686,0.00022467747,0.00047636506,0.0001957733,0.00002044986,0.00016586126],"domain_scores_gemma":[0.9995188,0.00006978305,0.00020313996,0.0001017348,0.00006677472,0.000039734],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00011661928,0.00014280334,0.00061317824,0.00012870008,0.00005805662,0.000005907873,0.00006257159,0.00008574147,0.0001322449],"category_scores_gemma":[0.0004526684,0.00012480874,0.000117321484,0.00019405175,0.00007650613,0.00007095806,0.000055912573,0.00011327081,0.0000026032124],"study_design_candidate":"randomized_trial","study_design_consensus":"randomized_trial","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.5322349,0.00063052337,0.44222,0.00035137692,0.00032722982,0.0000015879866,0.0005934221,0.000027796223,0.020865912,0.000689312,0.0002170281,0.0018409294],"study_design_scores_gemma":[0.9491348,0.00047785457,0.044964936,0.00027815308,0.00020314653,0.0000071338372,0.00016405054,0.000066472705,0.004085126,0.00009194542,0.0003238516,0.00020248536],"about_ca_topic_score_codex":0.005482996,"about_ca_topic_score_gemma":0.0010129632,"teacher_disagreement_score":0.41689995,"about_ca_system_score_codex":0.000013352585,"about_ca_system_score_gemma":0.00005189269,"threshold_uncertainty_score":0.8288686},"labels":[],"label_agreement":null},{"id":"W3006620476","doi":"10.3201/eid2603.ac2603","title":"Confusion in the Genesis of Art and Disease: Charles Laval, Paul Gauguin, and Tuberculosis","year":2020,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Leprosy Research and Treatment","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Confusion; Tuberculosis; Medicine; Art history; Classics; Art; Psychoanalysis; Pathology; Psychology","score_opus":0.013929033401204662,"score_gpt":0.2725081557499513,"score_spread":0.25857912234874664,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3006620476","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97884023,0.010719092,0.0000072562807,0.009651052,0.000015727186,0.0003986452,0.000054268552,0.00003782761,0.0002759091],"genre_scores_gemma":[0.9942645,0.004792993,0.0000065971735,0.00074169866,0.00006685306,0.00005870503,0.000036240195,0.000010024666,0.000022399974],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9991901,0.00007191009,0.0001384441,0.00021497486,0.00022486807,0.00015969931],"domain_scores_gemma":[0.99935704,0.000090469664,0.00003229867,0.00014014909,0.000040475872,0.0003395342],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00006696285,0.000113275564,0.00019234497,0.00006456189,0.00007804111,0.000022406166,0.000033713386,0.000020249396,0.00007774726],"category_scores_gemma":[0.00032033506,0.00007403181,0.000054620406,0.0001747678,0.000097968266,0.000053297983,0.000050533734,0.00006720065,0.0000065827503],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00016675386,0.0002953105,0.9897523,0.000346496,0.00007300373,0.000105294035,0.00067375676,0.0000027030837,0.0004878204,0.000080324484,0.0039521703,0.0040640878],"study_design_scores_gemma":[0.0015016639,0.00036320282,0.9951311,0.00010114765,0.00024569267,0.000014652307,0.00034807104,0.0002226733,0.00017155774,0.00017739562,0.0016351836,0.00008766343],"about_ca_topic_score_codex":0.00023424899,"about_ca_topic_score_gemma":0.000021750318,"teacher_disagreement_score":0.0154242655,"about_ca_system_score_codex":0.000014290838,"about_ca_system_score_gemma":0.00007085485,"threshold_uncertainty_score":0.30189294},"labels":[],"label_agreement":null},{"id":"W3012323524","doi":"10.3201/eid2604.191382","title":"Ecology and Epidemiology of Tickborne Pathogens, Washington, USA, 2011–2016","year":2020,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Insect and Pesticide Research","field":"Agricultural and Biological Sciences","cited_by":26,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"BC Centre for Disease Control","funders":"Centers for Disease Control and Prevention","keywords":"Ecology; Biology; Epidemiology; Geography; Medicine","score_opus":0.03269564311070273,"score_gpt":0.27490538023179145,"score_spread":0.24220973712108873,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3012323524","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99522483,0.0012865064,0.000011730016,0.002437019,0.00009715052,0.000120214725,0.00007043896,0.00005507255,0.0006970082],"genre_scores_gemma":[0.9983662,0.00044032905,0.000020939331,0.0007663014,0.0003108863,0.000011819017,0.000029015999,0.000001417096,0.00005312594],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99882185,0.00025851413,0.00024657333,0.00026489006,0.00009013436,0.0003180523],"domain_scores_gemma":[0.9985735,0.0009817756,0.000097585435,0.00004222372,0.000073334995,0.00023158282],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00022140467,0.00011838111,0.00028449204,0.000016815728,0.00016048453,0.000007515814,0.00011928139,0.000077913974,0.0027477276],"category_scores_gemma":[0.0008965108,0.000050931587,0.000083557585,0.00015273654,0.00014848447,0.00006272194,0.00010357152,0.0001111775,0.00010480187],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000027061871,0.000053138418,0.97783685,0.000031673688,0.000021872967,0.000006628879,0.000056667144,0.000024508818,0.008915373,0.00053759024,0.0017989102,0.010689707],"study_design_scores_gemma":[0.00013436715,0.0004941364,0.9939441,0.000010207508,0.000028446548,0.000006686436,0.000039431845,0.00029836374,0.00016045016,0.0015543018,0.0032029399,0.00012657735],"about_ca_topic_score_codex":0.00052291254,"about_ca_topic_score_gemma":0.00026000102,"teacher_disagreement_score":0.016107224,"about_ca_system_score_codex":0.00001039743,"about_ca_system_score_gemma":0.000019207302,"threshold_uncertainty_score":0.9981639},"labels":[],"label_agreement":null},{"id":"W3016647165","doi":"10.3201/eid2605.190131","title":"Biphasic Outbreak of Invasive Group A <i>Streptococcus</i> Disease in Eldercare Facility, New Zealand","year":2020,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Streptococcal Infections and Treatments","field":"Medicine","cited_by":10,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Institute of Infection and Immunity; Medical Research Council; University of Melbourne; National Health and Medical Research Council; Wellcome Trust","keywords":"Outbreak; Streptococcus pyogenes; Chemoprophylaxis; Epidemiology; Medicine; Streptococcus; Biology; Virology; Microbiology; Internal medicine; Genetics; Bacteria; Staphylococcus aureus","score_opus":0.018356983790566134,"score_gpt":0.2726967117625591,"score_spread":0.254339727971993,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3016647165","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99574083,0.00066592975,0.000084071966,0.0010798584,0.00012888073,0.0010648404,0.0003426454,0.00024413232,0.0006488123],"genre_scores_gemma":[0.9985989,0.0001141495,0.000013778484,0.00050981576,0.0001530231,0.00014738456,0.0002699728,0.000025381787,0.00016763527],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9984562,0.000057919027,0.00042762316,0.00048466874,0.00025352187,0.00032009132],"domain_scores_gemma":[0.99852985,0.00010803522,0.00012627922,0.00032197262,0.000084177576,0.0008297054],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.000029036697,0.0002880754,0.00048472564,0.00019881639,0.00007343946,0.000023898978,0.00007609797,0.000065157845,0.00055532076],"category_scores_gemma":[0.00041734762,0.000262557,0.00030579852,0.00067247485,0.00008503237,0.00014574324,0.000083268285,0.00016667295,0.00006579542],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00021912601,0.0006377382,0.9902199,0.0002539659,0.00017280014,0.00015493316,0.00036565465,0.00022226127,0.00035087933,0.000032839853,0.003082151,0.004287768],"study_design_scores_gemma":[0.00515598,0.0006735435,0.9893891,0.00027762473,0.00046456058,0.000007790685,0.00011470279,0.00008238454,0.00042991937,0.00035641974,0.0027807234,0.00026725503],"about_ca_topic_score_codex":0.0016920086,"about_ca_topic_score_gemma":0.00032024833,"teacher_disagreement_score":0.004936854,"about_ca_system_score_codex":0.00010779215,"about_ca_system_score_gemma":0.0002939891,"threshold_uncertainty_score":0.99998266},"labels":[],"label_agreement":null},{"id":"W3023840285","doi":"10.3201/eid2606.190233","title":"Increased Community-Associated <i>Clostridioides difficile</i> Infections in Quebec, Canada, 2008–20151","year":2020,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Clostridium difficile and Clostridium perfringens research","field":"Medicine","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Institut National de Santé Publique du Québec; Cégep de Rivière-du-Loup; Jewish General Hospital; Centre hospitalier universitaire de Québec; McGill University Health Centre","funders":"Institut National de Santé Publique du Québec","keywords":"Clostridioides; Medicine; Clostridium difficile; Microbiology; Environmental health; Internal medicine; Biology; Antibiotics","score_opus":0.016816534060232674,"score_gpt":0.2630611492293168,"score_spread":0.2462446151690841,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3023840285","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9892981,0.0008866677,0.000016766757,0.004628924,0.00021915908,0.00067806966,0.00025678298,0.00045846566,0.0035570604],"genre_scores_gemma":[0.99630135,0.00022170063,0.0000029632263,0.0020595868,0.00032754062,0.00010247732,0.00048075334,0.0000805542,0.00042309886],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99671376,0.0005275023,0.00066009746,0.00047361085,0.000777825,0.00084718195],"domain_scores_gemma":[0.99747735,0.00058825134,0.0001595517,0.0005255207,0.0002955079,0.00095379923],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00021014789,0.00044631242,0.00074300694,0.00031739124,0.000582915,0.00009206799,0.00024408271,0.00016106913,0.000580731],"category_scores_gemma":[0.0031570275,0.0004662614,0.00025494935,0.0018230149,0.00015009467,0.0001668381,0.00020212136,0.0013227565,0.000063429696],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000392688,0.0037798532,0.87185067,0.00041712288,0.00042363076,0.00051326875,0.0007138905,0.0010495023,0.009098583,0.000046673184,0.109639674,0.0020744465],"study_design_scores_gemma":[0.025533224,0.002806977,0.8480634,0.0013484595,0.0015099124,0.00015997881,0.0052002105,0.0054780412,0.029094057,0.00011303932,0.07749907,0.0031935906],"about_ca_topic_score_codex":0.9316954,"about_ca_topic_score_gemma":0.9415429,"teacher_disagreement_score":0.0321406,"about_ca_system_score_codex":0.0015206786,"about_ca_system_score_gemma":0.0026560607,"threshold_uncertainty_score":0.9997789},"labels":[],"label_agreement":null},{"id":"W3035401058","doi":"10.3201/eid2607.200187","title":"Lesions of <i>Mycobacterium avium</i> spp. <i>hominissuis</i> Infection Resembling <i>M. bovis</i> Lesions in a Wild Mule Deer, Canada1","year":2020,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Mycobacterium research and diagnosis","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Shared Health; Canadian Science Centre for Human and Animal Health; University of Calgary; Parks Canada","funders":"Faculty of Veterinary Medicine, University of Calgary","keywords":"Mycobacterium bovis; Biology; Mycobacterium; Wildlife; Microbiology; Mycobacterium avium complex; Zoonosis; Lymph node; Virology; Tuberculosis; Veterinary medicine; Pathology; Mycobacterium tuberculosis; Bacteria; Medicine; Immunology; Ecology; Genetics","score_opus":0.024672640380157283,"score_gpt":0.2934634579995483,"score_spread":0.26879081761939105,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3035401058","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99061406,0.0010170218,0.0002342783,0.0033390573,0.0003984543,0.0008079672,0.00017739915,0.0003252387,0.0030865371],"genre_scores_gemma":[0.9955002,0.0016262553,0.00008217187,0.0018029033,0.00048676986,0.0001584527,0.00016828613,0.00007886995,0.000096059885],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9969422,0.0002088638,0.0007517613,0.0006435042,0.0006686981,0.0007849738],"domain_scores_gemma":[0.9975203,0.00037667132,0.0002144993,0.00049068657,0.00028387847,0.001113955],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00021767033,0.00038365446,0.00073596166,0.0005013169,0.00025202354,0.00006160713,0.00016759365,0.0001573159,0.00049839914],"category_scores_gemma":[0.001755921,0.00038380976,0.0003385803,0.0015759603,0.00013562647,0.0003234696,0.00019742774,0.00053397694,0.00007252019],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0004809511,0.00097305956,0.9425298,0.0007908531,0.000118134936,0.00022507609,0.0003748521,0.00025614045,0.019650161,0.00008038762,0.031300835,0.0032197554],"study_design_scores_gemma":[0.008537895,0.002219479,0.88932616,0.0016093474,0.00083642156,0.00016280633,0.0003710621,0.0021104517,0.0218877,0.00017718812,0.071550824,0.0012106928],"about_ca_topic_score_codex":0.011336957,"about_ca_topic_score_gemma":0.0031057585,"teacher_disagreement_score":0.053203665,"about_ca_system_score_codex":0.000210301,"about_ca_system_score_gemma":0.000733795,"threshold_uncertainty_score":0.99986136},"labels":[],"label_agreement":null},{"id":"W3044332143","doi":"10.3201/eid2609.190524","title":"Costs Associated with Nontuberculous Mycobacteria Infection, Ontario, Canada, 2001–2012","year":2020,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Mycobacterium research and diagnosis","field":"Medicine","cited_by":12,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"West Park Healthcare Centre; Public Health Ontario; University of Toronto; University Health Network","funders":"","keywords":"Nontuberculous mycobacteria; Mycobacterium avium complex; Mycobacterium Infections; Microbiology; Medicine; Coinfection; Tuberculosis; Mycobacterium; Virology; Biology; Human immunodeficiency virus (HIV); Pathology","score_opus":0.012099418793471628,"score_gpt":0.23828652954868765,"score_spread":0.22618711075521603,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3044332143","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98991585,0.00018424829,0.000040929102,0.0018841537,0.00032472567,0.0005206813,0.00012821176,0.000362856,0.0066383323],"genre_scores_gemma":[0.9951903,0.0000798737,0.000009353703,0.0031605628,0.0003816112,0.00010684211,0.00038705528,0.000055947447,0.00062844536],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9978521,0.00009865728,0.00028996155,0.00044425754,0.0006147791,0.0007002457],"domain_scores_gemma":[0.9978227,0.00015331512,0.000121208766,0.00026809413,0.0003455172,0.0012891775],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00008030443,0.00031372788,0.00045683462,0.00010102372,0.00026304647,0.0000802879,0.00008289901,0.00008279174,0.0055752043],"category_scores_gemma":[0.000979882,0.00027333404,0.00012173641,0.00054722343,0.00006272428,0.00025268513,0.00006093338,0.00034713736,0.000058927995],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00022712242,0.00029052564,0.85665584,0.000067757865,0.00035981668,0.00025841946,0.00011665271,0.000036885693,0.0001853656,0.000008972169,0.14132337,0.00046928256],"study_design_scores_gemma":[0.001998429,0.0007437654,0.9568679,0.0001592969,0.00033992657,0.00004222808,0.00001994666,0.00007123932,0.00013238596,0.0000051327406,0.039298978,0.00032078652],"about_ca_topic_score_codex":0.9020235,"about_ca_topic_score_gemma":0.97934264,"teacher_disagreement_score":0.10202439,"about_ca_system_score_codex":0.0015973944,"about_ca_system_score_gemma":0.0028322567,"threshold_uncertainty_score":0.99997187},"labels":[],"label_agreement":null},{"id":"W3045553296","doi":"10.3201/eid2609.191519","title":"Information-Accessing Behavior during Zika Virus Outbreak, United States, 2016","year":2020,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Misinformation and Its Impacts","field":"Social Sciences","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"York University; Harvard T.H. Chan School of Public Health","keywords":"Zika virus; Outbreak; Environmental health; Medicine; Virology; Geography; Virus","score_opus":0.01676251287597177,"score_gpt":0.2974474925354516,"score_spread":0.28068497965947986,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3045553296","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.978996,0.00010032295,0.00055201113,0.001492511,0.00040130081,0.00031972912,0.000115200884,0.00088468374,0.017138261],"genre_scores_gemma":[0.9959841,0.0003039561,0.000017758492,0.0030132127,0.00026133025,0.000013327149,0.0001857721,0.000013837965,0.0002067325],"study_design_codex":"qualitative","study_design_gemma":"not_applicable","domain_scores_codex":[0.9986024,0.00009720771,0.00036148864,0.00010500051,0.00044193704,0.00039198867],"domain_scores_gemma":[0.9989123,0.00004891949,0.00020573947,0.00012689072,0.00016808632,0.0005380672],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00012388437,0.00015757207,0.00015662074,0.0002371212,0.0011547745,0.0005244631,0.00018349008,0.000060445007,0.0013193515],"category_scores_gemma":[0.00062482676,0.00015879038,0.00008536848,0.00081855804,0.00010902768,0.002760951,0.00006390764,0.000127197,0.00042069572],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00020876562,0.000619036,0.20146967,0.00055425434,0.00023176425,0.00003771355,0.5954186,0.011433379,0.00035522858,0.0055796322,0.09604936,0.08804263],"study_design_scores_gemma":[0.0024355818,0.00012087042,0.19028889,0.0001583489,0.00021542211,0.0000060727884,0.048245072,0.002342873,0.00039169315,0.00020774735,0.75442106,0.0011663464],"about_ca_topic_score_codex":0.0025887457,"about_ca_topic_score_gemma":0.000119455246,"teacher_disagreement_score":0.65837175,"about_ca_system_score_codex":0.00013172053,"about_ca_system_score_gemma":0.00022672555,"threshold_uncertainty_score":0.99959356},"labels":[],"label_agreement":null},{"id":"W3049587328","doi":"10.3201/eid2611.201099","title":"Potential Role of Social Distancing in Mitigating Spread of Coronavirus Disease, South Korea","year":2020,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"COVID-19 epidemiological studies","field":"Mathematics","cited_by":59,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"","keywords":"Social distance; Outbreak; Transmission (telecommunications); Coronavirus; Coronavirus disease 2019 (COVID-19); Disease; Virology; Pandemic; Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2); China; 2019-20 coronavirus outbreak; Environmental health; Disease transmission; Geography; Demography; Medicine; Infectious disease (medical specialty); Sociology","score_opus":0.07925570598974428,"score_gpt":0.3645984557785805,"score_spread":0.2853427497888362,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3049587328","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9962321,0.0007760697,0.0014591268,0.00037842547,0.00006698659,0.00026630878,0.00021842896,0.00017007608,0.00043246042],"genre_scores_gemma":[0.99941546,0.000016391574,0.00014133738,0.00017425683,0.00017402753,0.000032775417,0.00001302499,0.00002756547,0.0000051349284],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9981545,0.00018832705,0.00069650763,0.00033871338,0.0003004134,0.00032151182],"domain_scores_gemma":[0.99843985,0.0007136202,0.00044479035,0.00014965523,0.000083762454,0.00016833669],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00017361266,0.00022176378,0.00063203374,0.0000672947,0.00014525448,0.000009925933,0.0001567716,0.00005449394,0.00010397796],"category_scores_gemma":[0.005340591,0.00020822557,0.000291621,0.00034390544,0.00018425054,0.0000803313,0.00021237976,0.00015063371,0.0000037190819],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015190216,0.0003095244,0.9830561,0.00078409305,0.00011257939,0.000017136166,0.0036077767,0.0012296487,0.0010963723,0.0072653014,0.00014279384,0.0022267338],"study_design_scores_gemma":[0.0013407826,0.00014585638,0.90735185,0.00025789224,0.00039983014,5.414363e-7,0.0023504924,0.0040812073,0.00038945506,0.08296013,0.00024073746,0.0004812416],"about_ca_topic_score_codex":0.00024021628,"about_ca_topic_score_gemma":0.000054835746,"teacher_disagreement_score":0.07570431,"about_ca_system_score_codex":0.000080818914,"about_ca_system_score_gemma":0.00006685707,"threshold_uncertainty_score":0.8491192},"labels":[],"label_agreement":null},{"id":"W3082970883","doi":"10.3201/eid2610.191485","title":"<i>Streptococcus equi</i> Subspecies <i>zooepidemicus</i> and Sudden Deaths in Swine, Canada","year":2020,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Streptococcal Infections and Treatments","field":"Medicine","cited_by":41,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"Ministerie van Landbouw, Natuur en Voedselkwaliteit","keywords":"Streptococcus equi; Subspecies; Outbreak; Isolation (microbiology); Biology; Microbiology; Pathogen; Virology; Streptococcus suis; Bacteria; Zoology; Genetics; Gene; Virulence","score_opus":0.012024443226370802,"score_gpt":0.24590773253108195,"score_spread":0.23388328930471114,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3082970883","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9860772,0.0014308174,0.000034996432,0.0028911012,0.00019853501,0.0006469899,0.00006966368,0.00022919363,0.008421499],"genre_scores_gemma":[0.9968929,0.0001970995,0.00001781976,0.0021884937,0.00032497657,0.00013310694,0.000049318693,0.00003236439,0.0001639196],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9985989,0.000045660207,0.00033762198,0.0004322657,0.0002100687,0.00037553225],"domain_scores_gemma":[0.9990427,0.00013673173,0.0000786757,0.00020151075,0.00006368231,0.00047672263],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00003811637,0.00026310043,0.00041729416,0.000098878,0.0001399612,0.000033295662,0.000049989638,0.00005700085,0.0002668162],"category_scores_gemma":[0.00029004438,0.00023866606,0.00010022389,0.00046969255,0.000066922046,0.00011418126,0.00006848394,0.00018692871,0.000014634393],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000040304327,0.00012408251,0.9860725,0.00008306821,0.00010246408,0.00022660817,0.00007818583,0.00008386712,0.00022334162,0.000113807706,0.010162404,0.0026893977],"study_design_scores_gemma":[0.0033700727,0.00032986468,0.95496744,0.000137384,0.0002793322,0.00006360847,0.00023033864,0.0003651539,0.00064068194,0.00013398257,0.0391038,0.00037831714],"about_ca_topic_score_codex":0.12714013,"about_ca_topic_score_gemma":0.09173378,"teacher_disagreement_score":0.03540635,"about_ca_system_score_codex":0.0002041161,"about_ca_system_score_gemma":0.00032963115,"threshold_uncertainty_score":0.973252},"labels":[],"label_agreement":null},{"id":"W3098326518","doi":"10.3201/eid2612.201221","title":"Trends in Population Dynamics of<i>Escherichia coli</i>Sequence Type 131, Calgary, Alberta, Canada, 2006–20161","year":2020,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Antibiotic Resistance in Bacteria","field":"Biochemistry, Genetics and Molecular Biology","cited_by":39,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Calgary Laboratory Services; University of Calgary","funders":"Agence Nationale de la Recherche","keywords":"Subclade; Clade; Escherichia coli; Incidence (geometry); Population; Whole genome sequencing; Biology; Antimicrobial; Multilocus sequence typing; Drug resistance; Medicine; Demography; Microbiology; Phylogenetic tree; Genome; Genetics; Gene; Genotype; Environmental health","score_opus":0.007216244033662616,"score_gpt":0.23884648138893053,"score_spread":0.23163023735526792,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3098326518","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99778503,0.00025638417,0.00016151895,0.000304908,0.00023766977,0.00008151514,0.0000697869,0.000014422979,0.0010887524],"genre_scores_gemma":[0.9984535,0.00007006142,0.00005381192,0.0003256443,0.000102212456,0.0000036538713,0.00065006217,0.000023835448,0.0003172291],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99904346,0.000052875046,0.000255798,0.0002844482,0.00012574533,0.00023764648],"domain_scores_gemma":[0.999481,0.000014357598,0.00012281866,0.00019573595,0.000057128444,0.00012896085],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000025728386,0.00015178793,0.00018597435,0.000044058863,0.000046106707,0.000012055609,0.000121986704,0.000071722585,0.00008530268],"category_scores_gemma":[0.0001872542,0.00016383741,0.000059287508,0.00031125583,0.000043945627,0.0000075892763,0.000047659483,0.000066778455,0.000002141909],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009158246,0.00004832437,0.98061585,0.00004432478,0.000036968384,0.00000706158,0.000022677232,0.0007671077,0.014056701,0.000112303096,0.0030788905,0.0011181907],"study_design_scores_gemma":[0.00045803655,0.00017241857,0.9902199,0.000033585413,0.000046451194,0.000002446328,0.00002908892,0.0027294853,0.0014491512,0.000032070842,0.004503917,0.00032345363],"about_ca_topic_score_codex":0.29222444,"about_ca_topic_score_gemma":0.6110469,"teacher_disagreement_score":0.3188225,"about_ca_system_score_codex":0.00009912952,"about_ca_system_score_gemma":0.00022201774,"threshold_uncertainty_score":0.7124887},"labels":[],"label_agreement":null},{"id":"W3099422781","doi":"10.3201/eid2612.202808","title":"Hantavirus Cardiopulmonary Syndrome in Canada","year":2020,"lang":"en","type":"review","venue":"Emerging infectious diseases","topic":"Viral Infections and Vectors","field":"Medicine","cited_by":24,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"McMaster University; University of Manitoba; Public Health Agency of Canada","funders":"Public Health Agency; Public Health Agency of Canada","keywords":"Hantavirus; Hantavirus pulmonary syndrome; Epidemiology; Virology; Disease; Hantavirus Infection; Biology; Medicine; Intensive care medicine; Virus; Pathology","score_opus":0.021948660214180037,"score_gpt":0.2973726347416515,"score_spread":0.27542397452747147,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3099422781","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00092398375,0.99490905,0.0000037095986,0.00004747055,0.0010612947,0.0008244358,0.00019910255,0.00020386653,0.0018270891],"genre_scores_gemma":[0.025185915,0.9736391,0.0000024358756,0.00014923807,0.00031065271,0.00021806726,0.00023334115,0.00011282984,0.00014844931],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9978467,0.00013898424,0.0006697776,0.00057363976,0.00032226823,0.0004486011],"domain_scores_gemma":[0.9988516,0.00008593436,0.00019621689,0.00040436443,0.000037554906,0.0004243587],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00004917749,0.0005528982,0.0023259541,0.00039977604,0.00011926255,0.000026763402,0.000114984374,0.00014274915,0.00028365687],"category_scores_gemma":[0.00011941,0.0004880214,0.0007342871,0.001091123,0.00003536903,0.00007595794,0.00009087116,0.0006418634,0.0001151678],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000011985287,0.00020008851,0.03904037,0.017585104,0.0007601415,0.010334535,0.000013100866,0.000028668688,1.0222306e-7,0.000023058443,0.004059614,0.9279432],"study_design_scores_gemma":[0.00029562277,0.00012369217,0.0042917025,0.00734391,0.0019340455,0.0022260214,0.00001533118,0.000020520232,7.929826e-8,0.0000074688896,0.9832698,0.00047181256],"about_ca_topic_score_codex":0.66989607,"about_ca_topic_score_gemma":0.36495498,"teacher_disagreement_score":0.9792102,"about_ca_system_score_codex":0.0021398251,"about_ca_system_score_gemma":0.004667798,"threshold_uncertainty_score":0.9997572},"labels":[],"label_agreement":null},{"id":"W3101237274","doi":"10.3201/eid2612.201266","title":"Role of Oral Rabies Vaccines in the Elimination of Dog-Mediated Human Rabies Deaths","year":2020,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Rabies epidemiology and control","field":"Immunology and Microbiology","cited_by":88,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canadian Food Inspection Agency","funders":"","keywords":"Rabies; Vaccination; Dog bite; Medicine; Rabies virus; Population; One Health; Herd immunity; Virology; Veterinary medicine; Public health; Environmental health; Pathology","score_opus":0.010033786084910063,"score_gpt":0.25956068875328814,"score_spread":0.24952690266837807,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3101237274","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99228036,0.0050798655,0.000034296365,0.0013679632,0.00012389173,0.00023400986,0.00004396308,0.000072610834,0.0007630181],"genre_scores_gemma":[0.9992629,0.000107434695,0.0000029148155,0.00039084358,0.000031452822,0.000048543403,0.00012002264,0.000009554953,0.000026326748],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9985668,0.000547291,0.00044283757,0.00019178896,0.000037939193,0.00021332673],"domain_scores_gemma":[0.99893826,0.0005526895,0.00023891497,0.00017103009,0.00008173274,0.000017348044],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00023884095,0.00015148066,0.00040811146,0.00011328583,0.00013792465,0.0000042241,0.0002106079,0.00012417458,0.00022134051],"category_scores_gemma":[0.0010185407,0.00011201283,0.000134886,0.00024348182,0.00020052673,0.000089050496,0.000043661334,0.00017767723,0.000022252529],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00017997494,0.00031442015,0.8313374,0.0000818043,0.00025259148,0.0000023048076,0.0029905583,0.0004121163,0.15489672,0.005477257,0.002036679,0.0020181553],"study_design_scores_gemma":[0.0024381566,0.00052014674,0.97915024,0.000041844105,0.00021671288,0.000008033605,0.0024987771,0.000106497784,0.008763467,0.0027999126,0.0032473954,0.00020880476],"about_ca_topic_score_codex":0.00032749126,"about_ca_topic_score_gemma":0.00013938565,"teacher_disagreement_score":0.14781284,"about_ca_system_score_codex":0.0000110693945,"about_ca_system_score_gemma":0.000032167547,"threshold_uncertainty_score":0.45677507},"labels":[],"label_agreement":null},{"id":"W3106619470","doi":"10.3201/eid2701.203448","title":"Fatal Case of Chronic Jamestown Canyon Virus Encephalitis Diagnosed by Metagenomic Sequencing in Patient Receiving Rituximab","year":2020,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Mosquito-borne diseases and control","field":"Medicine","cited_by":33,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"National Center for Advancing Translational Sciences; National Institute of Neurological Disorders and Stroke; Broad Institute; Charles and Helen Schwab Foundation; National Institute of Allergy and Infectious Diseases; Centers for Disease Control and Prevention; National Institutes of Health","keywords":"Metagenomics; Virology; Rituximab; Encephalitis; Medicine; Virus; Biology; Immunology; Antibody; Genetics; Gene","score_opus":0.00866378672128945,"score_gpt":0.2476128560460299,"score_spread":0.23894906932474044,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3106619470","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9834766,0.014395506,0.00018920824,0.0002577301,0.00018941802,0.00065022125,0.00045285706,0.00015345965,0.00023503457],"genre_scores_gemma":[0.99827796,0.00045308948,0.000013806205,0.0007164501,0.00021827179,0.00014616092,0.00010779487,0.000050568247,0.00001590277],"study_design_codex":"observational","study_design_gemma":"simulation_or_modeling","domain_scores_codex":[0.9980106,0.0001337477,0.00059186976,0.00053349946,0.00026514908,0.0004651386],"domain_scores_gemma":[0.99876493,0.00013438832,0.00022937397,0.00031738973,0.00008404342,0.00046984525],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00007849222,0.0002990197,0.0006363401,0.00014759423,0.00011899035,0.000032344524,0.00009610526,0.00006843087,0.0006380374],"category_scores_gemma":[0.00050057075,0.0003046987,0.0002767943,0.00041621318,0.0000831004,0.00017442468,0.000076853954,0.00021707967,0.000017883507],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.001751818,0.005906628,0.37601438,0.0048575643,0.001923132,0.06304853,0.01417384,0.013966118,0.16113567,0.0003497105,0.013818585,0.34305403],"study_design_scores_gemma":[0.18989815,0.03362612,0.21517223,0.011254476,0.019819416,0.011855669,0.038647518,0.3025091,0.10716427,0.0007587265,0.055459794,0.0138345305],"about_ca_topic_score_codex":0.010325602,"about_ca_topic_score_gemma":0.0008969141,"teacher_disagreement_score":0.3292195,"about_ca_system_score_codex":0.0007068826,"about_ca_system_score_gemma":0.0005729857,"threshold_uncertainty_score":0.9999405},"labels":[],"label_agreement":null},{"id":"W3110668232","doi":"10.3201/eid2702.204632","title":"Evidence of SARS-CoV-2 RNA in an Oropharyngeal Swab Specimen, Milan, Italy, Early December 2019","year":2020,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Respiratory viral infections research","field":"Medicine","cited_by":80,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Memorial University of Newfoundland","funders":"Istituto Superiore di Sanità","keywords":"Virology; Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2); Coronavirus; Transmission (telecommunications); Measles; Coronavirus disease 2019 (COVID-19); 2019-20 coronavirus outbreak; Medicine; Biology; Disease; Outbreak; Infectious disease (medical specialty); Pathology; Vaccination","score_opus":0.09621739012859246,"score_gpt":0.39501171457548984,"score_spread":0.29879432444689735,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3110668232","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99369735,0.0025449295,0.00007981919,0.0004047868,0.0001607245,0.0005982909,0.00002382081,0.00020595573,0.0022843212],"genre_scores_gemma":[0.9983138,0.00021686939,0.000035080342,0.0008548077,0.0003555306,0.000048978414,0.000013484443,0.00005553312,0.00010592144],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9976629,0.00022170717,0.0005513311,0.0005367358,0.00057832774,0.00044900566],"domain_scores_gemma":[0.9986301,0.0001438519,0.00013121749,0.00048672478,0.00026789526,0.00034017756],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00017993597,0.00026371927,0.00052652386,0.0004033446,0.00009711835,0.000057045167,0.00019272736,0.00009452423,0.0005676346],"category_scores_gemma":[0.00079369935,0.00025472854,0.00018660873,0.0011325422,0.00017077489,0.00070829113,0.0001292723,0.00037892885,0.00028961585],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005486437,0.00061891647,0.7928036,0.00033859926,0.00008732184,0.00020954515,0.00039989135,0.00020359528,0.19627276,0.00004589815,0.0057056034,0.0027656544],"study_design_scores_gemma":[0.0035867789,0.005201611,0.89224964,0.0007966342,0.00023792061,0.000037150603,0.0001228581,0.0014714226,0.092102356,0.000118071,0.0034439894,0.000631567],"about_ca_topic_score_codex":0.0008737162,"about_ca_topic_score_gemma":0.0002615767,"teacher_disagreement_score":0.104170404,"about_ca_system_score_codex":0.00017264628,"about_ca_system_score_gemma":0.00028146122,"threshold_uncertainty_score":0.9999905},"labels":[],"label_agreement":null},{"id":"W3116039323","doi":"10.3201/eid2701.191650","title":"Estimating the Force of Infection for Dengue Virus Using Repeated Serosurveys, Ouagadougou, Burkina Faso","year":2020,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Mosquito-borne diseases and control","field":"Medicine","cited_by":14,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"European and Developing Countries Clinical Trials Partnership; Canadian Institutes of Health Research; Bill and Melinda Gates Foundation; European Commission; Medical Research Council; Department for International Development","keywords":"Medicine; Seroconversion; Outbreak; Dengue fever; Serology; Demography; Dengue virus; Attack rate; Virology; Immunology; Virus; Antibody","score_opus":0.02316979546991199,"score_gpt":0.3003635578700183,"score_spread":0.2771937624001063,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3116039323","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9502957,0.0009837967,0.046268217,0.00040934974,0.0004079286,0.0010904998,0.00010928535,0.00030686596,0.0001283661],"genre_scores_gemma":[0.99786204,0.000024698114,0.0002274467,0.00081551005,0.0007691348,0.00011580999,0.00008685285,0.000060181712,0.000038343358],"study_design_codex":"observational","study_design_gemma":"simulation_or_modeling","domain_scores_codex":[0.99838465,0.00011573332,0.00048091795,0.00039782329,0.00027626104,0.00034463732],"domain_scores_gemma":[0.998594,0.00019290655,0.00031243076,0.0003494573,0.00029273532,0.00025846838],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00019036236,0.0002567216,0.0004392117,0.00008248248,0.00036957389,0.000051236013,0.00009147494,0.00007061598,0.00008130912],"category_scores_gemma":[0.001375461,0.00020493663,0.0004189487,0.00045317097,0.00007737738,0.00013985882,0.000060727376,0.0001448766,0.0000048667657],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00080811395,0.00058198324,0.8961238,0.0016985695,0.0008243488,0.000027302029,0.00071337854,0.05952855,0.023831438,0.00025552648,0.0016348734,0.0139720645],"study_design_scores_gemma":[0.0057162093,0.0009848939,0.2736377,0.0004908299,0.0030397677,0.00004680952,0.00017216401,0.71016294,0.0031800163,0.0003841647,0.0016000409,0.0005844569],"about_ca_topic_score_codex":0.0008659091,"about_ca_topic_score_gemma":0.00004107882,"teacher_disagreement_score":0.65063435,"about_ca_system_score_codex":0.00007503203,"about_ca_system_score_gemma":0.00016385474,"threshold_uncertainty_score":0.8357073},"labels":[],"label_agreement":null},{"id":"W3116634221","doi":"10.3201/eid2701.203399","title":"Susceptibility of Domestic Swine to Experimental Infection with Severe Acute Respiratory Syndrome Coronavirus 2","year":2020,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"SARS-CoV-2 and COVID-19 Research","field":"Medicine","cited_by":99,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba; Canadian Food Inspection Agency","funders":"University of Toronto; Public Health Agency; Public Health Agency of Canada; Canadian Institutes of Health Research; Canadian Food Inspection Agency; University of Saskatchewan; U.S. Department of Agriculture","keywords":"Coronavirus; Virology; Transmission (telecommunications); Pandemic; Livestock; Antibody; Biology; Virus; Respiratory system; Immunology; Medicine; Disease; Coronavirus disease 2019 (COVID-19); Internal medicine; Infectious disease (medical specialty)","score_opus":0.03414131201744656,"score_gpt":0.3579672070426437,"score_spread":0.3238258950251971,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3116634221","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99755657,0.00038000045,0.00017597154,0.00015498392,0.0001141596,0.00071778515,0.000040843177,0.00031324785,0.00054642966],"genre_scores_gemma":[0.9870896,0.0000021835956,0.000024818259,0.012582338,0.00014107986,0.00010025562,0.0000062817617,0.000044656874,0.000008813849],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9982579,0.000090792935,0.0003093992,0.0004873685,0.0005177914,0.00033678018],"domain_scores_gemma":[0.999073,0.000072703115,0.00008771351,0.00036021907,0.00017392826,0.0002324225],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001042496,0.00024404016,0.0004307428,0.00019086745,0.00012252343,0.000023935112,0.000092571165,0.00006398072,0.00012908792],"category_scores_gemma":[0.00024414065,0.00021279845,0.00015229564,0.00075619476,0.0001325481,0.00015310428,0.00011073494,0.00020393617,0.00009401334],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0011968368,0.0006619811,0.9185745,0.0002854951,0.0002615862,0.00036241917,0.00034324257,0.000070390655,0.077185124,0.000015853315,0.0003294248,0.0007131336],"study_design_scores_gemma":[0.005460832,0.010716624,0.90863585,0.0002654316,0.0005430957,0.000512931,0.0002051113,0.00018036514,0.061798096,0.000028110759,0.011084613,0.00056894886],"about_ca_topic_score_codex":0.00039405737,"about_ca_topic_score_gemma":0.000072828945,"teacher_disagreement_score":0.01538703,"about_ca_system_score_codex":0.00023090713,"about_ca_system_score_gemma":0.00031300294,"threshold_uncertainty_score":0.8677669},"labels":[],"label_agreement":null},{"id":"W3120791932","doi":"10.3201/eid2702.201945","title":"Increasing Incidence of Invasive Group A <i>Streptococcus</i> Disease in First Nations Population, Alberta, Canada, 2003–2017","year":2021,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Streptococcal Infections and Treatments","field":"Medicine","cited_by":15,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Incidence (geometry); Population; Demography; Medicine; Disease; Streptococcus; Environmental health; Biology; Pathology","score_opus":0.007923503211383267,"score_gpt":0.2557802232991837,"score_spread":0.24785672008780044,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3120791932","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9957718,0.0006362194,0.000028491746,0.0003079681,0.0002848021,0.00062260084,0.00014273585,0.000056114364,0.0021492417],"genre_scores_gemma":[0.9984399,0.00017128284,0.00004572143,0.00018028208,0.000083888146,0.00025557526,0.00055967603,0.000026315189,0.0002373329],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9984363,0.00009816876,0.000462965,0.00040344417,0.00030813998,0.00029100658],"domain_scores_gemma":[0.99810463,0.0005339126,0.00018400041,0.00041063357,0.00041901288,0.00034783044],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000052943982,0.00022667379,0.00035959098,0.00028435842,0.00033977805,0.000026852862,0.00005809556,0.00005053732,0.00033857103],"category_scores_gemma":[0.0044233114,0.00023502554,0.00012339337,0.0014318193,0.0000588045,0.00020239891,0.00006442246,0.000120784505,0.000007385636],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00004792316,0.00081774214,0.99610287,0.0002278731,0.00012129863,0.00028033307,0.00006255432,0.00086722156,0.00005190067,0.00040192262,0.00082338677,0.00019499757],"study_design_scores_gemma":[0.0013936836,0.00005188985,0.99580175,0.0007080827,0.00027977044,0.00004825332,0.000064285225,0.00018950817,0.00013751489,0.00013990783,0.0009877143,0.00019762358],"about_ca_topic_score_codex":0.79195774,"about_ca_topic_score_gemma":0.96245825,"teacher_disagreement_score":0.17050049,"about_ca_system_score_codex":0.00051268714,"about_ca_system_score_gemma":0.0014536302,"threshold_uncertainty_score":0.9584063},"labels":[],"label_agreement":null},{"id":"W3131669543","doi":"10.3201/eid2703.204090","title":"Systematic Review of Pooling Sputum as an Efficient Method for Xpert MTB/RIF Tuberculosis Testing during the COVID-19 Pandemic","year":2021,"lang":"en","type":"review","venue":"Emerging infectious diseases","topic":"Tuberculosis Research and Epidemiology","field":"Medicine","cited_by":38,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Medical Research Council; Instituto de Salud Carlos III; National Institute for Health Research Health Protection Research Unit; National Institute for Health and Care Research; Coordenação de Aperfeiçoamento de Pessoal de Nível Superior; Global Affairs Canada; Department for International Development","keywords":"Sputum; Coronavirus disease 2019 (COVID-19); Pandemic; Medicine; Virology; Tuberculosis; 2019-20 coronavirus outbreak; GeneXpert MTB/RIF; Pooling; Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2); Internal medicine; Computer science; Pathology; Artificial intelligence; Infectious disease (medical specialty)","score_opus":0.07799101779276267,"score_gpt":0.4523027316861691,"score_spread":0.3743117138934064,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3131669543","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00022710457,0.9913402,0.001186072,0.0003641015,0.00027926028,0.0060436446,0.00015462788,0.00028788275,0.0001171149],"genre_scores_gemma":[0.00014930814,0.99307436,0.0004513976,0.0024436205,0.0005138245,0.002795162,0.00034194218,0.00014618086,0.00008420349],"study_design_codex":"systematic_review","study_design_gemma":"systematic_review","domain_scores_codex":[0.9915537,0.0034929495,0.0023704956,0.0010188834,0.00065091363,0.0009130174],"domain_scores_gemma":[0.9857954,0.009933257,0.0012849622,0.0014290642,0.0006053542,0.00095197296],"candidate_categories":["metaresearch","metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.004143362,0.00075056514,0.0058223186,0.00046230608,0.00057511125,0.000048921862,0.00040002476,0.00028948026,0.00014631228],"category_scores_gemma":[0.08911785,0.000474022,0.0021477474,0.0012520497,0.00013835142,0.00006369171,0.00024311774,0.00070378464,0.00001958405],"study_design_candidate":"systematic_review","study_design_consensus":"systematic_review","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00001288334,0.00025626837,0.0009958107,0.9846825,0.0014142095,0.000051511317,0.000059333797,0.00020805157,0.0000034505786,0.0000584167,0.0005074647,0.011750097],"study_design_scores_gemma":[0.00068553654,0.00036735213,0.000051180585,0.9175595,0.02098684,0.0035902124,0.00011793045,0.0014257026,0.000001389219,0.00003498806,0.054498777,0.0006805686],"about_ca_topic_score_codex":0.00061207364,"about_ca_topic_score_gemma":0.000018508976,"teacher_disagreement_score":0.08497449,"about_ca_system_score_codex":0.0008693561,"about_ca_system_score_gemma":0.0017401486,"threshold_uncertainty_score":0.9997711},"labels":[],"label_agreement":null},{"id":"W3133277531","doi":"10.3201/eid2703.203124","title":"Validity of Diagnosis Code–Based Claims to Identify Pulmonary NTM Disease in Bronchiectasis Patients","year":2021,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Tracheal and airway disorders","field":"Medicine","cited_by":26,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"","keywords":"Bronchiectasis; Pulmonary disease; Medicine; Disease; Intensive care medicine; Pathology; Internal medicine; Lung","score_opus":0.017525593674150266,"score_gpt":0.3036550507814937,"score_spread":0.28612945710734344,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3133277531","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9966812,0.00059998484,0.00010965994,0.0010071696,0.00029910594,0.00044248515,0.00032398626,0.0001333307,0.0004030916],"genre_scores_gemma":[0.99844253,0.00011433303,0.00003191238,0.0007379402,0.00007416506,0.00019214007,0.00031322666,0.000037250586,0.000056483965],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9982521,0.00013181298,0.0004108808,0.00045270807,0.00041143227,0.0003410811],"domain_scores_gemma":[0.99867225,0.0001620247,0.000093161056,0.00037320016,0.00019545789,0.00050388474],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00007087491,0.00022264116,0.00039188517,0.00026374657,0.0000955656,0.000019364012,0.00008260732,0.000054715714,0.0004883056],"category_scores_gemma":[0.00065681804,0.00022846514,0.00028127656,0.0007785223,0.000060021834,0.000110075736,0.000068772344,0.00014509948,0.00003144069],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001704648,0.0044126473,0.98255885,0.0004668384,0.000034758763,0.00012750669,0.0000676536,0.0010993787,0.00011340418,0.000012148218,0.0010574664,0.00987888],"study_design_scores_gemma":[0.001493841,0.00018683991,0.9949053,0.00035504057,0.00024981372,0.0000010203754,0.00004933216,0.00029646495,0.0006503262,0.0002384531,0.0013463545,0.00022719562],"about_ca_topic_score_codex":0.0002670764,"about_ca_topic_score_gemma":0.00018780153,"teacher_disagreement_score":0.012346466,"about_ca_system_score_codex":0.000112850095,"about_ca_system_score_gemma":0.00024245857,"threshold_uncertainty_score":0.9316538},"labels":[],"label_agreement":null},{"id":"W3137792737","doi":"10.3201/eid2704.203631","title":"Risk for Fomite-Mediated Transmission of SARS-CoV-2 in Child Daycares, Schools, Nursing Homes, and Offices","year":2021,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Infection Control and Ventilation","field":"Medicine","cited_by":63,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba","funders":"National Institute of Environmental Health Sciences; National Institute of General Medical Sciences; National Institute of Food and Agriculture; National Institutes of Health; World Health Organization; U.S. Department of Agriculture","keywords":"Transmission (telecommunications); Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2); Airborne transmission; Coronavirus disease 2019 (COVID-19); 2019-20 coronavirus outbreak; Environmental health; Medicine; Nursing homes; Cross infection; Sars virus; Medical emergency; Virology; Nursing; Intensive care medicine; Outbreak; Computer science; Disease; Telecommunications","score_opus":0.010427761555930986,"score_gpt":0.290957997391836,"score_spread":0.280530235835905,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3137792737","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9820525,0.0066212784,0.009203969,0.0004184419,0.00026736467,0.0004583196,0.000067889414,0.00011324134,0.000797011],"genre_scores_gemma":[0.99871093,0.0006865116,0.00009613982,0.0000929191,0.00014002666,0.00003119884,0.00019703084,0.000021571568,0.00002368432],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9990288,0.00007494092,0.0003106542,0.00025870345,0.00014105183,0.00018587266],"domain_scores_gemma":[0.9993953,0.0001108474,0.00013457322,0.00013044038,0.00015440468,0.00007441905],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000116631105,0.00013857495,0.00030959802,0.00023304216,0.00014858719,0.000023146426,0.000021064925,0.000076692144,0.000020172241],"category_scores_gemma":[0.00038720798,0.00013336397,0.00013659813,0.00030230716,0.000036012992,0.00013968337,0.000008192505,0.000151285,0.000001512693],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00056732446,0.0010445596,0.91827345,0.0005487112,0.0001583703,0.00002206885,0.00034289222,0.00028941897,0.015335022,0.00017279784,0.0008121626,0.062433235],"study_design_scores_gemma":[0.008568506,0.00038054973,0.95245653,0.0016346298,0.0006428675,0.00007374514,0.00024375012,0.014556452,0.014253281,0.0005742055,0.0063284324,0.00028704028],"about_ca_topic_score_codex":0.00012057012,"about_ca_topic_score_gemma":0.00007782517,"teacher_disagreement_score":0.062146198,"about_ca_system_score_codex":0.000059485017,"about_ca_system_score_gemma":0.00011216357,"threshold_uncertainty_score":0.5438425},"labels":[],"label_agreement":null},{"id":"W3137952195","doi":"10.3201/eid2704.191716","title":"Genomic Surveillance of a Globally Circulating Distinct Group W Clonal Complex 11 Meningococcal Variant, New Zealand, 2013–2018","year":2021,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":10,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"Institute of Environmental Science and Research","keywords":"Meningococcal Infections; Genetics; Neisseria meningitidis; Biology; Multilocus sequence typing; Group (periodic table); Meningococcal disease; Virology; Computational biology; Genotype; Gene","score_opus":0.01387444899403855,"score_gpt":0.24778462960064906,"score_spread":0.2339101806066105,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3137952195","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99495816,0.0012492106,0.00080334424,0.00022401825,0.0017185247,0.00014740272,0.00025040118,0.00019468227,0.00045425142],"genre_scores_gemma":[0.99829674,0.00006803491,0.00006736608,0.00005337231,0.0003208068,0.000013321765,0.00064971694,0.000027757855,0.0005029105],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.998458,0.00024164192,0.0004659169,0.00040190804,0.000036771646,0.00039574096],"domain_scores_gemma":[0.9990771,0.00015980065,0.0002446676,0.00031322145,0.00013016624,0.00007505746],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00012404892,0.00024976357,0.00044655672,0.00008669114,0.00032278328,0.00004823538,0.00014208847,0.00012909471,0.0026855138],"category_scores_gemma":[0.000158555,0.00024974032,0.00022284171,0.00029315992,0.00009322325,0.00009865733,0.00016320235,0.00013753164,0.000085290754],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000059694787,0.00029409057,0.7792068,0.000035748533,0.00030637422,0.000012073776,0.00008138551,0.00011485335,0.20208926,0.000735189,0.0156102795,0.001454219],"study_design_scores_gemma":[0.0018334804,0.00011211057,0.9212093,0.000044371405,0.00010866068,0.00042489977,0.000031690804,0.00004021488,0.00037719816,0.00034380105,0.07516203,0.00031227537],"about_ca_topic_score_codex":0.004149677,"about_ca_topic_score_gemma":0.002259218,"teacher_disagreement_score":0.20171206,"about_ca_system_score_codex":0.000067558045,"about_ca_system_score_gemma":0.00016655494,"threshold_uncertainty_score":0.99999547},"labels":[],"label_agreement":null},{"id":"W3174337095","doi":"10.3201/eid2707.210005","title":"Outbreak of Rabbit Hemorrhagic Disease Virus 2 Infections, Ghana","year":2021,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Viral gastroenteritis research and epidemiology","field":"Medicine","cited_by":12,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canadian Food Inspection Agency","funders":"Canadian Food Inspection Agency","keywords":"Outbreak; Virology; Virus; Rabbit (cipher); Disease; Biology; Veterinary medicine; Medicine; Pathology","score_opus":0.013836117484396006,"score_gpt":0.3024062905672572,"score_spread":0.2885701730828612,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3174337095","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98966736,0.004532979,0.0007139347,0.001459852,0.00040043332,0.0002364887,0.00016339878,0.00022146876,0.002604074],"genre_scores_gemma":[0.9966959,0.0008284024,0.00006933048,0.0009380135,0.00029250098,0.00005813369,0.00021840606,0.00003217505,0.00086718576],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99822384,0.00021888445,0.00041403162,0.0003801523,0.00028229118,0.0004807747],"domain_scores_gemma":[0.9984273,0.000060579532,0.00010493651,0.00044321836,0.00028500924,0.00067900936],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00012196074,0.00019760754,0.0004889098,0.00021583702,0.00015502636,0.000018874784,0.00006914088,0.000053657033,0.0013875426],"category_scores_gemma":[0.002166196,0.00019209349,0.0003622733,0.00041493136,0.00017498297,0.0001170705,0.00012057333,0.00021250946,0.000087653236],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00024612772,0.0014018617,0.9778145,0.00044747163,0.00022009137,0.0006707563,0.000027865972,0.00012212142,0.0043425276,0.00035105107,0.008892912,0.0054627215],"study_design_scores_gemma":[0.003526708,0.00092414283,0.9706208,0.00040365773,0.00057133683,0.00048642044,0.00015062014,0.00064200535,0.0015233285,0.0012252238,0.019568114,0.00035760624],"about_ca_topic_score_codex":0.00025210253,"about_ca_topic_score_gemma":0.00009314887,"teacher_disagreement_score":0.010675201,"about_ca_system_score_codex":0.00009559587,"about_ca_system_score_gemma":0.0003200801,"threshold_uncertainty_score":0.9995253},"labels":[],"label_agreement":null},{"id":"W3175676175","doi":"10.3201/eid2707.204403","title":"Whole-Genome Analysis of <i>Streptococcus pneumoniae</i> Serotype 4 Causing Outbreak of Invasive Pneumococcal Disease, Alberta, Canada","year":2021,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Pneumonia and Respiratory Infections","field":"Medicine","cited_by":34,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Calgary Laboratory Services; Public Health Agency of Canada; University of Alberta; University of Calgary","funders":"Alberta Health Services","keywords":"Serotype; Streptococcus pneumoniae; Outbreak; Pneumonia; Lineage (genetic); Biology; Pneumococcal infections; Pneumococcal disease; Clade; Virology; Disease; Medicine; Phylogenetic tree; Microbiology; Genetics; Antibiotics; Gene; Internal medicine","score_opus":0.008512249669151742,"score_gpt":0.2468217281447363,"score_spread":0.23830947847558456,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3175676175","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99557877,0.0005460553,0.00004522782,0.0007276869,0.0003502166,0.00035130393,0.00075486687,0.0000705032,0.0015753454],"genre_scores_gemma":[0.99820215,0.00007895478,0.0000023118619,0.00050476944,0.00011531727,0.000057621208,0.00047818056,0.000042245552,0.00051848096],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9977175,0.00013640428,0.000718552,0.00051073416,0.0005022057,0.00041462053],"domain_scores_gemma":[0.99741477,0.00030753625,0.0003676028,0.0007049719,0.0006308993,0.0005742022],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00006271918,0.00032844782,0.00093376706,0.00048388226,0.0002120729,0.000020954714,0.000090804926,0.00008336803,0.00036900636],"category_scores_gemma":[0.0006387214,0.0003231454,0.0006283605,0.002259708,0.0001567701,0.00011575474,0.00011089115,0.00020612607,0.0000059440763],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000023632836,0.0005466951,0.85960543,0.00036221519,0.0024825535,0.0002812053,0.00012185725,0.00730805,0.12898746,0.000044711058,0.000119875775,0.0001162869],"study_design_scores_gemma":[0.0007061712,0.000112342044,0.98186606,0.00018491429,0.007391316,0.000024262707,0.00019521182,0.00024983706,0.0025450026,0.000025811207,0.0063755377,0.0003235045],"about_ca_topic_score_codex":0.0739077,"about_ca_topic_score_gemma":0.3808723,"teacher_disagreement_score":0.3069646,"about_ca_system_score_codex":0.00025226249,"about_ca_system_score_gemma":0.0031680146,"threshold_uncertainty_score":0.99992204},"labels":[],"label_agreement":null},{"id":"W3184707783","doi":"10.3201/eid2708.203566","title":"Modeling Immune Evasion and Vaccine Limitations by Targeted Nasopharyngeal <i>Bordetella pertussis</i> Inoculation in Mice","year":2021,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":19,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"National Institute of Allergy and Infectious Diseases; National Institute on Deafness and Other Communication Disorders; National Institutes of Health; National Institute of General Medical Sciences; University of Georgia","keywords":"Bordetella pertussis; Immune system; Colonization; Immunity; Immunology; Biology; Pneumonia; Respiratory tract; Immunization; Evasion (ethics); Virology; Microbiology; Medicine; Respiratory system; Bacteria; Internal medicine","score_opus":0.01089325494308313,"score_gpt":0.2357992728791004,"score_spread":0.22490601793601728,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3184707783","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9763042,0.021674175,0.00040257195,0.00034167286,0.00076916587,0.00014885407,0.000043164917,0.00014677994,0.00016944532],"genre_scores_gemma":[0.99696106,0.0019196323,0.000020278994,0.0000875258,0.00005745289,0.000039139246,0.0007148911,0.000023391725,0.00017661476],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9988415,0.00018385038,0.0003534877,0.0003405567,0.00002195765,0.0002586123],"domain_scores_gemma":[0.9994815,0.00012074977,0.00006638254,0.00015655217,0.00013815294,0.000036658334],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00008109423,0.00018977764,0.00026041365,0.00016404859,0.0003469413,0.00004577665,0.000047945305,0.0001353944,0.00026583867],"category_scores_gemma":[0.00023143385,0.00019354017,0.00008108644,0.00035970364,0.000020510442,0.00023963285,0.00007000547,0.00017791847,0.000023843435],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000088501154,0.00050073146,0.060202368,0.000047404166,0.00013799289,0.000004125224,0.0003443764,0.0037963798,0.9259437,0.000124445,0.0009912762,0.007818716],"study_design_scores_gemma":[0.02876162,0.0010816744,0.62683284,0.00092422083,0.0014963946,0.0007738828,0.0027172186,0.052410204,0.22122847,0.0025561983,0.057331584,0.0038856799],"about_ca_topic_score_codex":0.00052902556,"about_ca_topic_score_gemma":0.00033451835,"teacher_disagreement_score":0.7047152,"about_ca_system_score_codex":0.000049950595,"about_ca_system_score_gemma":0.000054879434,"threshold_uncertainty_score":0.7892339},"labels":[],"label_agreement":null},{"id":"W3193948732","doi":"10.3201/eid2709.204701","title":"Laboratory Exposures from an Unsuspected Case of Human Infection with <i>Brucella canis</i>","year":2021,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Brucella: diagnosis, epidemiology, treatment","field":"Veterinary","cited_by":9,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"BC Centre for Disease Control; Fraser Health; University of British Columbia","funders":"","keywords":"Brucella; Microbiology; Brucellosis; Canis; Virology; Medicine; Biology","score_opus":0.027157538920355835,"score_gpt":0.33549599076957726,"score_spread":0.30833845184922143,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3193948732","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9957021,0.0015762614,0.000060357965,0.00008653964,0.00043374323,0.00028910415,0.00050110626,0.0005965617,0.0007542153],"genre_scores_gemma":[0.9984431,0.00014250442,0.00013267399,0.00027625207,0.0003334809,0.00015245879,0.0003970651,0.00009135259,0.00003108517],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9970429,0.000982302,0.00057041005,0.0007712397,0.00020705751,0.00042608278],"domain_scores_gemma":[0.9976717,0.00041700518,0.00036470845,0.0008476657,0.000396224,0.00030266508],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00016165379,0.0004196127,0.00060358166,0.00017543294,0.00041276508,0.000050929684,0.000103314596,0.00016173325,0.00094735634],"category_scores_gemma":[0.0002540315,0.00040530917,0.00016488016,0.00055154663,0.00019064007,0.00023147283,0.00008999222,0.00022536093,0.00003098396],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001212606,0.0017836881,0.9648062,0.00009115242,0.00056932325,0.0076529705,0.00044706385,0.00047208177,0.021316499,0.00036576707,0.0019802123,0.0003938002],"study_design_scores_gemma":[0.0035496587,0.00349688,0.9550812,0.0002548999,0.0012693867,0.001914741,0.0006919658,0.00010216992,0.029436722,0.0011765938,0.001972227,0.0010535226],"about_ca_topic_score_codex":0.026294058,"about_ca_topic_score_gemma":0.019366002,"teacher_disagreement_score":0.009724949,"about_ca_system_score_codex":0.00023706598,"about_ca_system_score_gemma":0.00023096497,"threshold_uncertainty_score":0.9999659},"labels":[],"label_agreement":null},{"id":"W3215406545","doi":"10.3201/eid2801.211811","title":"Limited Propagation of SARS-CoV-2 among Children in a Childcare Center, Canada, 2021","year":2021,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"COVID-19 and Mental Health","field":"Psychology","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Ministry of Health and Long Term Care","funders":"","keywords":"Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2); Coronavirus disease 2019 (COVID-19); 2019-20 coronavirus outbreak; Virology; Center (category theory); Sars virus; Betacoronavirus; Pandemic; Medicine; Outbreak","score_opus":0.019362091352838888,"score_gpt":0.32966242454614986,"score_spread":0.31030033319331096,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3215406545","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99496716,0.0010485819,0.000021537538,0.0002725842,0.00069285877,0.000336266,0.00017261654,0.000044302462,0.00244411],"genre_scores_gemma":[0.9985293,0.00005814183,0.00000293068,0.0007723196,0.00011488418,0.000052346455,0.00031080344,0.000022049438,0.00013718195],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9986539,0.0001688146,0.00032649073,0.00034358262,0.0001923089,0.0003148865],"domain_scores_gemma":[0.9993624,0.000054210355,0.00013067403,0.00028970852,0.00007643685,0.000086546075],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000056014338,0.0001495208,0.00022700691,0.00014461199,0.00008545361,0.00001170348,0.00007881968,0.00005236984,0.00029349996],"category_scores_gemma":[0.00008990477,0.00016525725,0.000079967984,0.0005080569,0.00003833119,0.00007124746,0.000050146562,0.00013558046,0.0000090205085],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000028576378,0.0006315013,0.98953265,0.000079649966,0.00005829379,0.0000561642,0.0005003749,0.000030831197,0.00021591866,0.00013831543,0.0031122824,0.0056154416],"study_design_scores_gemma":[0.0012376944,0.00005371884,0.9957577,0.00012624038,0.000031262043,0.00001464241,0.00023308741,0.000032271728,0.0012277702,0.000036592573,0.0010925351,0.00015648367],"about_ca_topic_score_codex":0.5908441,"about_ca_topic_score_gemma":0.7776663,"teacher_disagreement_score":0.18682222,"about_ca_system_score_codex":0.00040875693,"about_ca_system_score_gemma":0.00082822883,"threshold_uncertainty_score":0.67389953},"labels":[],"label_agreement":null},{"id":"W4210677908","doi":"10.3201/eid2802.210213","title":"Epidemiology of Hospitalized Patients with Babesiosis, United States, 2010–2016","year":2022,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Vector-borne infectious diseases","field":"Immunology and Microbiology","cited_by":27,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canadian Blood Services","funders":"National Center for Advancing Translational Sciences; National Heart, Lung, and Blood Institute","keywords":"Babesiosis; Epidemiology; Medicine; Babesia; Environmental health; Tick-borne disease; Virology; Intensive care medicine; Internal medicine","score_opus":0.007283813847095562,"score_gpt":0.23206172657272434,"score_spread":0.22477791272562878,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4210677908","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9904911,0.0053391126,0.00013946256,0.00012062312,0.0014497559,0.0005700107,0.0012043355,0.00047174923,0.00021388802],"genre_scores_gemma":[0.9951731,0.00016041889,0.000010110276,0.0006606394,0.000029887427,0.00019458278,0.0032757143,0.000067063724,0.00042847983],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9968881,0.0011572682,0.0006177541,0.0005615115,0.000115174065,0.0006601744],"domain_scores_gemma":[0.9978734,0.0006495953,0.0005470868,0.0005656466,0.00026332168,0.0001009056],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00024673762,0.00037732234,0.00067767693,0.0005603217,0.000691284,0.000004591449,0.00030758133,0.00010023896,0.003957962],"category_scores_gemma":[0.00056953944,0.00033427158,0.00023892253,0.000767293,0.00040082904,0.00013247879,0.000287202,0.00034317267,0.000098662735],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003927542,0.0017758099,0.97227925,0.000047055357,0.0007256052,0.0000052269706,0.00012969483,0.0038463264,0.0000825422,0.00029691297,0.020139532,0.0002792981],"study_design_scores_gemma":[0.0044368966,0.0016767168,0.97150064,0.00003941328,0.00042497815,0.000017137283,0.00012165892,0.00002982731,0.00008213695,0.00058242143,0.02059258,0.0004955862],"about_ca_topic_score_codex":0.0017918138,"about_ca_topic_score_gemma":0.000028812976,"teacher_disagreement_score":0.0051786937,"about_ca_system_score_codex":0.0001925063,"about_ca_system_score_gemma":0.00018000031,"threshold_uncertainty_score":0.99991095},"labels":[],"label_agreement":null},{"id":"W4212937399","doi":"10.3201/eid2803.211919","title":"Retrospective Cohort Study of Effects of the COVID-19 Pandemic on Tuberculosis Notifications, Vietnam, 2020","year":2022,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Tuberculosis Research and Epidemiology","field":"Medicine","cited_by":23,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Tuberculosis; Pandemic; Medicine; Quarter (Canadian coin); Retrospective cohort study; Coronavirus disease 2019 (COVID-19); Cohort study; Cohort; Multi-drug-resistant tuberculosis; Virology; Disease; Internal medicine; Mycobacterium tuberculosis; Infectious disease (medical specialty); Geography; Pathology","score_opus":0.017923602511433625,"score_gpt":0.32837586616462977,"score_spread":0.31045226365319617,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4212937399","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9947797,0.0004947943,0.000016699762,0.001897982,0.0003334529,0.0019459551,0.00006259826,0.000100160585,0.0003686547],"genre_scores_gemma":[0.99757344,0.00017864424,0.000001990551,0.0012606208,0.00007828532,0.00075622526,0.000027864744,0.000024353865,0.00009857674],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99714637,0.0010310264,0.00043261168,0.00042446147,0.0006860157,0.00027949078],"domain_scores_gemma":[0.9979768,0.0007249,0.00024374905,0.00071069127,0.00013147791,0.00021242534],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00057949626,0.0001715443,0.0005601353,0.00020091099,0.00048199983,0.000004556942,0.00020346555,0.000040707844,0.0003372141],"category_scores_gemma":[0.0058482,0.00012956806,0.0002584541,0.0008499028,0.00015480262,0.0000319486,0.00021034741,0.00041344666,0.000006506885],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00019942524,0.0025657613,0.9836524,0.0002453718,0.0005620273,0.0000119886145,0.00047230205,0.0019174427,0.0007127906,0.00014390277,0.00934674,0.00016981113],"study_design_scores_gemma":[0.0015916601,0.0017854952,0.99444455,0.000027468586,0.0004716169,0.00002963314,0.00038977872,0.00015048729,0.00006071826,0.0001971725,0.00074489287,0.000106516054],"about_ca_topic_score_codex":0.0011827423,"about_ca_topic_score_gemma":0.00012946379,"teacher_disagreement_score":0.010792124,"about_ca_system_score_codex":0.00063319074,"about_ca_system_score_gemma":0.0002361231,"threshold_uncertainty_score":0.7001264},"labels":[{"model":"gemma","categories":[],"domain":null,"study_design":"observational","genre":"empirical","about_ca_system":false,"about_ca_topic":false,"confidence":"low"},{"model":"gpt","categories":[],"domain":null,"study_design":"observational","genre":"empirical","about_ca_system":false,"about_ca_topic":false,"confidence":"high"}],"label_agreement":"agree"},{"id":"W4220838295","doi":"10.3201/eid2805.220318","title":"Intercontinental Movement of Highly Pathogenic Avian Influenza A(H5N1) Clade 2.3.4.4 Virus to the United States, 2021","year":2022,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Influenza Virus Research Studies","field":"Medicine","cited_by":218,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"U.S. Fish and Wildlife Service; Canadian Food Inspection Agency; U.S. Department of Agriculture","keywords":"Flyway; Waterfowl; Influenza A virus subtype H5N1; Clade; Highly pathogenic; Avian influenza virus; Influenza A virus; Lineage (genetic); Virology; Biology; Virus; Zoology; Geography; Phylogenetics; Ecology; Gene; Genetics; Habitat","score_opus":0.024912173621302255,"score_gpt":0.32425282772620395,"score_spread":0.2993406541049017,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4220838295","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9933465,0.0021682244,0.00006583707,0.0016231195,0.00037448143,0.0010686327,0.00071940623,0.00013602542,0.0004977572],"genre_scores_gemma":[0.9886136,0.00030042155,0.000021703449,0.009559484,0.00021882371,0.00061982375,0.00021513466,0.000056833465,0.00039414104],"study_design_codex":"observational","study_design_gemma":"not_applicable","domain_scores_codex":[0.99723226,0.00029841362,0.00056103995,0.00040145798,0.00092776585,0.000579046],"domain_scores_gemma":[0.9985239,0.00016077362,0.0001696612,0.0005989428,0.0002607528,0.00028600162],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00029327147,0.00028588442,0.0004177836,0.00058441923,0.00066907925,0.000034800712,0.0002869228,0.000029751873,0.0014002766],"category_scores_gemma":[0.0004601109,0.0002280094,0.0002695646,0.0013029403,0.00014443487,0.00007950448,0.00086589163,0.00042592557,0.00008071679],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0030337512,0.004215919,0.7732379,0.0005739887,0.0030727605,0.00039845036,0.011682451,0.048106372,0.046500355,0.000839031,0.08917387,0.019165142],"study_design_scores_gemma":[0.004548432,0.0024073487,0.2617534,0.0001853215,0.00057999976,0.00002899956,0.0048050066,0.0013077189,0.0035537775,0.00026003018,0.7199436,0.00062635593],"about_ca_topic_score_codex":0.004342364,"about_ca_topic_score_gemma":0.0002810018,"teacher_disagreement_score":0.6307697,"about_ca_system_score_codex":0.0004636901,"about_ca_system_score_gemma":0.00016290115,"threshold_uncertainty_score":0.99951255},"labels":[],"label_agreement":null},{"id":"W4224255111","doi":"10.3201/eid2805.212535","title":"Genomic Epidemiology of Global Carbapenemase-Producing <i>Escherichia coli,</i> 2015–2017","year":2022,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Antibiotic Resistance in Bacteria","field":"Biochemistry, Genetics and Molecular Biology","cited_by":98,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph; University of Calgary","funders":"Canadian Institutes of Health Research; National Institutes of Health; Joint Programming Initiative on Antimicrobial Resistance; AstraZeneca","keywords":"Subclade; Klebsiella pneumoniae; Escherichia coli; Molecular epidemiology; Biology; Plasmid; Microbiology; Epidemiology; Klebsiella infections; New delhi; Population; Multilocus sequence typing; Genetics; Medicine; Genotype; Phylogenetics; Gene; Environmental health; Clade; Internal medicine","score_opus":0.0112744290491503,"score_gpt":0.27948041803722756,"score_spread":0.26820598898807724,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4224255111","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9930171,0.004227042,0.00038533605,0.0001276611,0.0008494231,0.0002045417,0.00022573675,0.000046661517,0.0009165449],"genre_scores_gemma":[0.99855125,0.0001375471,0.00020035086,0.00042264216,0.00028233527,0.000033816246,0.00016726337,0.000028105882,0.00017670193],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9982592,0.00033278216,0.0003961441,0.00052361767,0.0001248051,0.00036345277],"domain_scores_gemma":[0.9988763,0.000040390332,0.00031512234,0.0005948346,0.00006417201,0.00010918617],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003163426,0.00020009525,0.0003318878,0.000031071933,0.00028392178,0.0000064248425,0.00028592776,0.00006244218,0.00013949611],"category_scores_gemma":[0.00043596994,0.00022384949,0.00018631236,0.00017180832,0.00015021561,0.0000049499895,0.0003726753,0.000101325655,0.000007879631],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010056917,0.00013235876,0.9147232,0.00004513876,0.000113679715,0.0000061487763,0.000019302972,0.0031363792,0.07187743,0.00023054858,0.009471049,0.00014417435],"study_design_scores_gemma":[0.0006406743,0.00038400176,0.97942185,0.000015451205,0.000116316056,0.00003969753,0.0001203248,0.00008557095,0.0017673789,0.00049916,0.016517842,0.00039173986],"about_ca_topic_score_codex":0.00024865658,"about_ca_topic_score_gemma":0.000053556247,"teacher_disagreement_score":0.070110045,"about_ca_system_score_codex":0.000109345216,"about_ca_system_score_gemma":0.00020944967,"threshold_uncertainty_score":0.9128317},"labels":[],"label_agreement":null},{"id":"W4231138537","doi":"10.3201/eid2307.c12307","title":"Correction: Vol. 23, No. 4","year":2017,"lang":"en","type":"erratum","venue":"Emerging infectious diseases","topic":"Diverse Scientific and Economic Studies","field":"Economics, Econometrics and Finance","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Toronto General Hospital","funders":"","keywords":"Computer science; Data science; Medicine; Information retrieval; Library science","score_opus":0.019949839218254054,"score_gpt":0.2247837533299166,"score_spread":0.20483391411166255,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4231138537","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000017753582,0.010416398,0.000034729408,0.000046780107,0.3646345,0.00015573237,0.0011031668,0.00020230687,0.6233886],"genre_scores_gemma":[0.0010505021,0.004604221,0.0000071719205,0.00019341723,0.0076486785,0.00008187272,0.00043460392,0.00007915146,0.9859004],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9974746,0.000015029562,0.0007389942,0.0011121647,0.000074698226,0.0005844876],"domain_scores_gemma":[0.997313,0.000050497958,0.0011782602,0.0010542416,0.00019638297,0.00020762002],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00027409397,0.00048126522,0.0010445911,0.00048010034,0.0011237788,0.0005391929,0.00057504274,0.0003084649,0.019833911],"category_scores_gemma":[0.0017204094,0.0005932055,0.0007358852,0.00013202861,0.00026867457,0.00040099572,0.00031684004,0.00051941554,0.11415027],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000059155313,0.000108781656,0.009304407,0.00016734278,0.00032056562,0.000009776736,0.00008395055,0.000032352855,1.6555362e-8,0.0011951057,0.98838806,0.00038371893],"study_design_scores_gemma":[0.0003438667,0.000041843236,0.0031192943,0.00020229898,0.00008276402,0.0000033004226,0.000040362287,0.00056387077,1.406226e-7,0.0014421445,0.99348444,0.0006756817],"about_ca_topic_score_codex":0.0005043447,"about_ca_topic_score_gemma":0.000064530854,"teacher_disagreement_score":0.36251175,"about_ca_system_score_codex":0.00032387197,"about_ca_system_score_gemma":0.00010892026,"threshold_uncertainty_score":0.9996519},"labels":[],"label_agreement":null},{"id":"W4232389775","doi":"10.3201/eid1610.100427","title":"Artesunate Misuse and<i>Plasmodium falciparum</i>Malaria in Traveler Returning from Africa","year":2010,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Malaria Research and Control","field":"Medicine","cited_by":22,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"The Scarborough Hospital; University of Toronto","funders":"University of Toronto; University Health Network","keywords":"Artesunate; Artemisinin; Malaria; Plasmodium falciparum; Artemether; Dihydroartemisinin; Medicine; Virology; Traditional medicine; Immunology","score_opus":0.01002854720093478,"score_gpt":0.26186959006808486,"score_spread":0.2518410428671501,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4232389775","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9902665,0.0006505144,0.00008033977,0.0024940989,0.00032052174,0.00040803564,0.000044606935,0.00019325783,0.0055420958],"genre_scores_gemma":[0.99867016,0.00007576127,0.00009290445,0.00023459297,0.0003297638,0.00009470444,0.00004394124,0.000035437373,0.00042276102],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9983816,0.00008343412,0.00027570128,0.00041868634,0.00030928047,0.00053126033],"domain_scores_gemma":[0.99883866,0.00020662123,0.000066519264,0.00033676953,0.00008346432,0.0004679766],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00018531646,0.00021925922,0.0003545384,0.0002629765,0.00013858228,0.000080824,0.00009288307,0.00012334168,0.0009694119],"category_scores_gemma":[0.00080624706,0.00019905424,0.00010629868,0.0002653142,0.00009575665,0.00014440165,0.000060989594,0.0006754241,0.000050653605],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0009197361,0.00080583675,0.92015696,0.00013053705,0.0002714671,0.0005082876,0.0011294932,0.00002983677,0.06085176,0.0029568425,0.002760732,0.009478543],"study_design_scores_gemma":[0.006239556,0.0002313585,0.97543895,0.00012365503,0.0001996627,0.000041727475,0.00012535088,0.0048713116,0.0008108592,0.0021823563,0.009375939,0.00035927648],"about_ca_topic_score_codex":0.0006580569,"about_ca_topic_score_gemma":0.0004876514,"teacher_disagreement_score":0.0600409,"about_ca_system_score_codex":0.000036844613,"about_ca_system_score_gemma":0.00014203753,"threshold_uncertainty_score":0.99994385},"labels":[],"label_agreement":null},{"id":"W4233508906","doi":"10.3201/eid1601.090900","title":"Epidemiology of Cryptococcus gattii, British Columbia, Canada, 1999–2007","year":2010,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Fungal Infections and Studies","field":"Medicine","cited_by":23,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"Centers for Disease Control and Prevention; Department for International Development; United States Agency for International Development; Texas Department of State Health Services; U.S. Department of State","keywords":"Cryptococcus gattii; Cryptococcosis; Incidence (geometry); Medicine; Epidemiology; Disease; Population; Cryptococcus; Pediatrics; Demography; Internal medicine; Immunology; Environmental health; Biology","score_opus":0.009433948311316616,"score_gpt":0.26614625646434403,"score_spread":0.2567123081530274,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4233508906","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98865664,0.0019614834,0.00005827114,0.00021316648,0.0020443373,0.0003287556,0.00012031609,0.00014155259,0.0064754514],"genre_scores_gemma":[0.9969396,0.0001275533,0.000094147574,0.00068122573,0.00045727857,0.00007848191,0.000029707699,0.000024127337,0.0015678882],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.998727,0.000056916702,0.00041928206,0.00028173448,0.0001518545,0.00036319168],"domain_scores_gemma":[0.99873567,0.0003500599,0.00014767433,0.0002924209,0.00023021783,0.00024397677],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0001584617,0.00012937453,0.00052373443,0.00006083218,0.00030145154,0.000010565063,0.000058779635,0.00008266409,0.0019712788],"category_scores_gemma":[0.0016415112,0.00017548456,0.00017204222,0.00022922497,0.00020921727,0.000050318497,0.00005078444,0.0002977341,0.000010489538],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000008043937,0.00021104318,0.91026115,0.000100131656,0.00014151674,0.000038588907,0.000012518716,0.000017740149,0.00012695871,0.000059982835,0.08668736,0.0023349468],"study_design_scores_gemma":[0.0006059106,0.00016034808,0.96085745,0.00007001189,0.00016433082,0.00013993164,0.000039248527,0.00006113491,0.000018842882,0.00031219868,0.037407916,0.0001626651],"about_ca_topic_score_codex":0.9365697,"about_ca_topic_score_gemma":0.9745162,"teacher_disagreement_score":0.050596293,"about_ca_system_score_codex":0.000076591365,"about_ca_system_score_gemma":0.0004222132,"threshold_uncertainty_score":0.99894106},"labels":[],"label_agreement":null},{"id":"W4239286411","doi":"10.3201/eid1706.101756","title":"Characterization and Prevalence of a New Porcine Calicivirus in Swine, United States","year":2011,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Viral gastroenteritis research and epidemiology","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"Ohio Agricultural Research and Development Center, Ohio State University; National Institutes of Health; National Pork Board; Ohio State University","keywords":"Calicivirus; Feline calicivirus; Caliciviridae; Virology; Biology; Zoonotic disease; Disease; Norovirus; Virus; Medicine","score_opus":0.026108296517919783,"score_gpt":0.2953319835982634,"score_spread":0.2692236870803436,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4239286411","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99835044,0.00032157797,0.00068689743,0.00023382739,0.000038799742,0.00018698204,0.000040184426,0.000044359673,0.00009695312],"genre_scores_gemma":[0.9972625,0.0018962565,0.000046692883,0.00030792714,0.000046436973,0.0000120803315,0.00013226115,0.000010739724,0.00028510482],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99923825,0.00007196288,0.00023686221,0.00015615296,0.00008489091,0.00021188406],"domain_scores_gemma":[0.9995648,0.000014156303,0.00006861826,0.00011182728,0.00005245505,0.00018813365],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00008300832,0.00008972208,0.00021914445,0.00027539593,0.000021122803,0.0000031175073,0.000032663032,0.00002830375,0.0002777416],"category_scores_gemma":[0.0003407451,0.0000803688,0.000032212734,0.00024185602,0.00007039795,0.00008260652,0.000033716784,0.00007924419,0.0000035597525],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00024701125,0.00016698411,0.99117476,0.00031541582,0.000022879482,0.000027677936,0.00031638102,0.000008512717,0.0046202447,0.000030804575,0.00022805233,0.00284129],"study_design_scores_gemma":[0.0010173491,0.0005496671,0.9966829,0.00019618626,0.00003591735,0.000026142556,0.000030000621,0.00061173475,0.0002940278,0.000115924144,0.0003860492,0.000054146632],"about_ca_topic_score_codex":0.0022683986,"about_ca_topic_score_gemma":0.000082258826,"teacher_disagreement_score":0.0055081085,"about_ca_system_score_codex":0.0000208138,"about_ca_system_score_gemma":0.000038150225,"threshold_uncertainty_score":0.34291553},"labels":[],"label_agreement":null},{"id":"W4240293504","doi":"10.3201/eid1706.110161","title":"<i>Vibrio cholerae</i>in Traveler from Haiti to Canada","year":2011,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Vibrio bacteria research studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":7,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Vibrio cholerae; Cholera; Microbiology; Virology; Biology; Geography; Bacteria; Genetics","score_opus":0.0105822896684151,"score_gpt":0.22840776100339072,"score_spread":0.21782547133497562,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4240293504","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99523944,0.00042988075,0.00007955803,0.00013406572,0.00029311364,0.00018422266,0.00015420554,0.000027043892,0.0034584953],"genre_scores_gemma":[0.9983876,0.000084264815,0.00006700177,0.0007458581,0.00022072734,0.000077663186,0.00008498063,0.000026438467,0.00030547433],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9988631,0.000054467575,0.0001700912,0.00037576418,0.00015949254,0.00037707106],"domain_scores_gemma":[0.9994033,0.00001260411,0.000032500455,0.00028732818,0.00005767562,0.00020656985],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00004113511,0.00017087122,0.00016215436,0.000058684825,0.00009011511,0.000021189944,0.0001584989,0.000029805995,0.00017099244],"category_scores_gemma":[0.00016525523,0.00017491517,0.000058697773,0.00013603801,0.000035932964,0.000004545715,0.00015245397,0.00007099208,0.000015091239],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002695722,0.0003925174,0.8156202,0.000039513834,0.00034356827,0.00019894203,0.00064658886,0.00017833618,0.13551657,0.00003448579,0.040526915,0.006232808],"study_design_scores_gemma":[0.00078095443,0.00016798622,0.9250842,0.00003273437,0.000023144747,0.0000056427625,0.0001499726,0.000015127527,0.024847908,0.00007645102,0.048408464,0.0004074189],"about_ca_topic_score_codex":0.42455345,"about_ca_topic_score_gemma":0.6389435,"teacher_disagreement_score":0.21439002,"about_ca_system_score_codex":0.000070465176,"about_ca_system_score_gemma":0.00027610263,"threshold_uncertainty_score":0.71328336},"labels":[],"label_agreement":null},{"id":"W4240631644","doi":"10.3201/eid1710.110638_article.htm","title":"Livestock-associated Methicillin-Susceptible Staphylococcus aureus ST398 Infection in Woman, Colombia","year":2011,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Microbial Metabolism and Applications","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Staphylococcus aureus; Livestock; Methicillin-resistant Staphylococcus aureus; Microbiology; Staphylococcal infections; Medicine; Veterinary medicine; Gram-negative bacterial infections; Biology; Antibiotics; Bacteria; Ecology","score_opus":0.013815578084440084,"score_gpt":0.2538253082658804,"score_spread":0.2400097301814403,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4240631644","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9960658,0.0006793026,0.00071186165,0.000026627813,0.0002909161,0.00038306136,0.0000707075,0.000110994864,0.00166073],"genre_scores_gemma":[0.9983888,0.0004875668,0.00009033986,0.000250066,0.00017325325,0.00018240606,0.00011388695,0.000035717407,0.00027791093],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9987113,0.00013961793,0.00028612345,0.00041672232,0.00010491716,0.00034133036],"domain_scores_gemma":[0.9992563,0.000016454047,0.00014264887,0.00033982366,0.00011704632,0.0001276977],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014883252,0.00021522917,0.00021175755,0.00015185832,0.0001846986,0.000027097269,0.00013683915,0.00017045827,0.00017726803],"category_scores_gemma":[0.00021670423,0.00023467265,0.000135745,0.00038759084,0.000086377535,0.0000124480175,0.00009171883,0.00015575373,0.000042313954],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000661299,0.001309679,0.5313737,0.000037772472,0.00014764702,0.000005140623,0.00038078442,0.00038235952,0.45674,0.00071759627,0.007446147,0.001393096],"study_design_scores_gemma":[0.0018697651,0.0006234016,0.9057233,0.000054893375,0.00017788516,0.0000030829267,0.00009488722,0.00005151143,0.062384367,0.001519928,0.026709856,0.00078714144],"about_ca_topic_score_codex":0.0015153458,"about_ca_topic_score_gemma":0.0025311415,"teacher_disagreement_score":0.39435562,"about_ca_system_score_codex":0.00004106147,"about_ca_system_score_gemma":0.000091953894,"threshold_uncertainty_score":0.9569673},"labels":[],"label_agreement":null},{"id":"W4242744940","doi":"10.3201/eid1304.060087","title":"Flinders Island Spotted Fever Rickettsioses Caused by “marmionii” Strain of Rickettsia honei, Eastern Australia","year":2007,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Vector-borne infectious diseases","field":"Immunology and Microbiology","cited_by":25,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Rickettsiosis; Eschar; Murine typhus; Rickettsia; Tick; Petechial rash; Scrub typhus; Biology; Maculopapular rash; Virology; Typhus; Spotted fever; myalgia; Rash; Dermatology; Medicine; Immunology; Pathology","score_opus":0.013597832777828348,"score_gpt":0.26991140632549826,"score_spread":0.2563135735476699,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4242744940","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99181527,0.0026824437,0.0008976035,0.000076676406,0.0015807674,0.0005221048,0.0009474792,0.000566202,0.0009114386],"genre_scores_gemma":[0.9967034,0.00006964686,0.00000795424,0.00025058427,0.00014354743,0.000033948738,0.0006624885,0.000082405044,0.0020460535],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9968819,0.00029907824,0.0008550607,0.00072353176,0.00019701931,0.0010434077],"domain_scores_gemma":[0.9980789,0.00041313216,0.00048618956,0.0005890055,0.0002319563,0.0002008547],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00032799033,0.0005992039,0.00068663585,0.00051170914,0.00039866322,0.0000468569,0.00032897308,0.00036150214,0.002644349],"category_scores_gemma":[0.00037014572,0.0005998076,0.0004123457,0.00068929093,0.00054899853,0.0002873573,0.00011617827,0.00041575095,0.00043701686],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00022285363,0.00151875,0.8697152,0.00013831201,0.0011340191,0.000058596845,0.00039550348,0.00013062725,0.07737178,0.00015099077,0.04698586,0.0021774606],"study_design_scores_gemma":[0.0054739937,0.0005068078,0.9597774,0.00015202674,0.0008635754,0.00009799477,0.0005665972,0.000012899827,0.013714522,0.00038361156,0.017233007,0.0012175385],"about_ca_topic_score_codex":0.0012535971,"about_ca_topic_score_gemma":0.0007040047,"teacher_disagreement_score":0.090062186,"about_ca_system_score_codex":0.00017610751,"about_ca_system_score_gemma":0.00014328239,"threshold_uncertainty_score":0.99964535},"labels":[],"label_agreement":null},{"id":"W4243067173","doi":"10.3201/eid1203.050854","title":"Web-based Surveillance and Global<i>Salmonella</i>Distribution, 2000–2002","year":2006,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Salmonella and Campylobacter epidemiology","field":"Agricultural and Biological Sciences","cited_by":67,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Public Health Agency of Canada","funders":"British Columbia Centre for Disease Control","keywords":"Serotype; Salmonella enterica; Salmonella; Public health; Global health; Biology; Distribution (mathematics); Environmental health; Geography; Virology; Bacteria; Medicine; Genetics","score_opus":0.006506362116374879,"score_gpt":0.21363113834704928,"score_spread":0.2071247762306744,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4243067173","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9925028,0.002796618,0.000047869467,0.00085091015,0.00024583164,0.00013709211,0.0005507981,0.0004071643,0.0024609007],"genre_scores_gemma":[0.99841285,0.00008896618,0.0000062366485,0.00045047546,0.0004224142,0.000023644548,0.00045683922,0.0000016292134,0.0001369199],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9985676,0.00017708231,0.00027345357,0.0004182002,0.00014066763,0.00042304167],"domain_scores_gemma":[0.999325,0.00024457095,0.000115402974,0.00008269915,0.00008138301,0.00015098047],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014904211,0.0002184078,0.00025955567,0.000009358308,0.00031303192,0.00006181236,0.00011917731,0.00009593363,0.000428419],"category_scores_gemma":[0.00011054834,0.00010549681,0.00011805022,0.00042283372,0.00012451712,0.000072775,0.000042965476,0.00007170136,0.00006506848],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000016426196,0.00012163455,0.97344625,0.000007995566,0.000009920156,0.000007346645,0.0000012043764,0.00016782944,0.0012305479,0.0003094589,0.019589063,0.005092326],"study_design_scores_gemma":[0.00030228632,0.00008205118,0.9353888,0.000009307136,0.000018600605,0.000015501424,0.000008456377,0.0003640557,0.000040265124,0.0012302031,0.06229365,0.00024683017],"about_ca_topic_score_codex":0.0013192063,"about_ca_topic_score_gemma":0.001123429,"teacher_disagreement_score":0.04270459,"about_ca_system_score_codex":0.00007573568,"about_ca_system_score_gemma":0.000025068197,"threshold_uncertainty_score":0.46908876},"labels":[],"label_agreement":null},{"id":"W4243635755","doi":"10.3201/eid1810.120119","title":"<i>Echinococcus multilocularis</i>in Urban Coyotes, Alberta, Canada","year":2012,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Parasitic infections in humans and animals","field":"Medicine","cited_by":68,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"Natural Sciences and Engineering Research Council of Canada; Faculty of Veterinary Medicine, University of Calgary; University of Calgary","keywords":"Echinococcus multilocularis; Canis; Parasite hosting; Veterinary medicine; Vulpes; Biology; Zoology; Geography; Ecology; Echinococcosis; Predation; Medicine","score_opus":0.007902125337200727,"score_gpt":0.2630669590543673,"score_spread":0.25516483371716653,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4243635755","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9769326,0.001957078,0.00013271043,0.00014773037,0.0008888633,0.0003325285,0.00001756331,0.00012258434,0.019468352],"genre_scores_gemma":[0.99737126,0.000035072033,0.000038757164,0.000799326,0.0005688135,0.000064859676,0.00003348416,0.000034937097,0.0010534659],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.998583,0.000058875165,0.00030226557,0.00023653546,0.00023761325,0.00058168266],"domain_scores_gemma":[0.9991072,0.00013415363,0.00007042863,0.00029179972,0.000057848527,0.0003385933],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00010888782,0.00022379021,0.00031571073,0.0001679374,0.00020608486,0.00002037881,0.00005903857,0.00006376489,0.0005412843],"category_scores_gemma":[0.0002742739,0.00021372548,0.0001224343,0.00029182536,0.00005270586,0.00015130821,0.000031857053,0.00022596213,0.00005269023],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000017562554,0.00049004983,0.98906666,0.000070338785,0.00006201793,0.000034672776,0.00016326376,0.00006964138,0.00012534419,0.0007865403,0.008194526,0.00091936305],"study_design_scores_gemma":[0.0012172591,0.000070003385,0.9103386,0.00012447525,0.00017814767,0.000096097945,0.00006588073,0.00028026028,0.00029616777,0.00005079747,0.08696643,0.0003159041],"about_ca_topic_score_codex":0.5874302,"about_ca_topic_score_gemma":0.3166163,"teacher_disagreement_score":0.27081388,"about_ca_system_score_codex":0.00037164765,"about_ca_system_score_gemma":0.00032232323,"threshold_uncertainty_score":0.8715472},"labels":[],"label_agreement":null},{"id":"W4245377899","doi":"10.3201/eid/1907.130027","title":"The Stealth Virus","year":2013,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Animal Disease Management and Epidemiology","field":"Agricultural and Biological Sciences","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Provincial Laboratory of Public Health","funders":"","keywords":"Virology; Virus; Biology; Computational biology; Medicine","score_opus":0.01168750868444367,"score_gpt":0.2285404157460857,"score_spread":0.216852907061642,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4245377899","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98629916,0.0008495044,0.000006408983,0.003332766,0.00023058339,0.00024446228,0.000011172376,0.00025758814,0.008768343],"genre_scores_gemma":[0.9971171,0.00033093485,0.0000016096698,0.001230722,0.00033313243,0.00010036392,0.0000239444,9.801157e-7,0.00086119876],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99909455,0.00011382967,0.00015969944,0.00018961423,0.00010421008,0.00033812583],"domain_scores_gemma":[0.9993813,0.00031115045,0.00006704193,0.000059311813,0.000039482515,0.00014170779],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.000103492566,0.000109713415,0.00010462315,0.0000071681998,0.00076194503,0.0001023575,0.00017999626,0.000027278757,0.0015311242],"category_scores_gemma":[0.00013998167,0.00003305344,0.00010673298,0.00016948763,0.0000741048,0.00012282707,0.00008507524,0.00006110523,0.000774402],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000019104153,0.00015996842,0.5684371,0.000010381131,0.00006460012,0.000002908416,0.00002330901,0.000028029055,0.002242115,0.007415811,0.17627098,0.24532571],"study_design_scores_gemma":[0.000053690175,0.000082451494,0.87641597,0.000003494911,0.00001743932,6.117075e-7,0.0001215135,0.00016445304,0.0000045669594,0.005398088,0.11762764,0.00011007102],"about_ca_topic_score_codex":0.0017671947,"about_ca_topic_score_gemma":0.0007354821,"teacher_disagreement_score":0.3079789,"about_ca_system_score_codex":0.00001828587,"about_ca_system_score_gemma":0.0000041645376,"threshold_uncertainty_score":0.9993816},"labels":[],"label_agreement":null},{"id":"W4250406061","doi":"10.3201/eid1102.040978","title":"SARS Control and Psychological Effects of Quarantine, Toronto, Canada","year":2005,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"COVID-19 and Mental Health","field":"Psychology","cited_by":352,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University Health Network","funders":"","keywords":"Quarantine; Coronavirus disease 2019 (COVID-19); Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2); 2019-20 coronavirus outbreak; Medicine; Sars virus; Virology; Family medicine; Internal medicine; Pathology; Infectious disease (medical specialty); Outbreak; Disease","score_opus":0.0131127106962017,"score_gpt":0.35086675876222917,"score_spread":0.3377540480660275,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4250406061","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98690563,0.0067455205,0.00012898084,0.0003439073,0.00097650464,0.00031926928,0.000036761445,0.000088391665,0.004455022],"genre_scores_gemma":[0.99747634,0.00013856108,0.000008325444,0.0019065992,0.00021241159,0.000047562324,0.000005636652,0.000014178375,0.0001903817],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.998939,0.00010870227,0.00023279876,0.0002750662,0.00013969028,0.00030475337],"domain_scores_gemma":[0.9992275,0.00027396696,0.00009234553,0.00020221928,0.000025146874,0.00017882213],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00006024512,0.00014654725,0.00024808617,0.000032560598,0.00009726965,0.0000066951648,0.00006930783,0.00005071994,0.00044052693],"category_scores_gemma":[0.000064645385,0.00013406086,0.00005882436,0.00007027394,0.000059043443,0.00005957122,0.000016168548,0.00007430013,0.000009077598],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003741933,0.0018748826,0.8245008,0.00049971463,0.0002171589,0.00007397564,0.00079548545,0.000044791333,0.0007105215,0.0036387641,0.03781262,0.12945709],"study_design_scores_gemma":[0.0036060144,0.00050715875,0.9681037,0.000045569806,0.00010206073,0.000022087155,0.00010617737,0.00006132893,0.00007010694,0.00006575213,0.02708904,0.00022100941],"about_ca_topic_score_codex":0.53359497,"about_ca_topic_score_gemma":0.48074922,"teacher_disagreement_score":0.1436029,"about_ca_system_score_codex":0.00022550194,"about_ca_system_score_gemma":0.00012844092,"threshold_uncertainty_score":0.5466843},"labels":[],"label_agreement":null},{"id":"W4254962334","doi":"10.3201/2009.140420","title":"Worker Health and Safety Practices in Research Facilities Using Nonhuman Primates, North America","year":2014,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Animal testing and alternatives","field":"Veterinary","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"","keywords":"Medicine; Environmental health; Virology; Family medicine; Gerontology","score_opus":0.262355117798796,"score_gpt":0.4800222623245339,"score_spread":0.21766714452573788,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4254962334","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9946044,0.0015372342,0.00021498861,0.00016452472,0.00008535495,0.00019925232,0.000030909287,0.00021557596,0.0029477382],"genre_scores_gemma":[0.9989598,0.00025504312,0.0002564068,0.00011984729,0.00017217545,0.00002105847,0.00001997828,0.00002753691,0.00016819191],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99779385,0.0007068017,0.00030357743,0.00041850688,0.000284165,0.0004931085],"domain_scores_gemma":[0.9984497,0.00077799166,0.00027637533,0.00021568844,0.00008378761,0.00019644425],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004975301,0.00017590763,0.000263368,0.00026211955,0.0006213235,0.000116150906,0.00011423364,0.000026389336,0.00006965167],"category_scores_gemma":[0.001721603,0.00016919804,0.00004032458,0.0003640159,0.00024098328,0.00031657354,0.000161671,0.00030807953,0.000024771305],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00022561998,0.0002123037,0.9762778,0.00027157692,0.000030039002,0.000022694381,0.0030299285,0.00042179934,0.000049182425,0.00017886484,0.00021914358,0.01906103],"study_design_scores_gemma":[0.0012513491,0.0028812853,0.9144582,0.0007546192,0.000027830973,0.00009166439,0.0061129173,0.02078863,0.000003881147,0.0014320939,0.051472615,0.0007248704],"about_ca_topic_score_codex":0.005629023,"about_ca_topic_score_gemma":0.0003939234,"teacher_disagreement_score":0.061819572,"about_ca_system_score_codex":0.0001451015,"about_ca_system_score_gemma":0.0001167259,"threshold_uncertainty_score":0.8509436},"labels":[],"label_agreement":null},{"id":"W4255921256","doi":"10.3201/eid1706.101905","title":"Methicillin-Resistant<i>Staphylococcus aureus</i>in Retail Meat, Detroit, Michigan, USA","year":2011,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Antimicrobial Resistance in Staphylococcus","field":"Medicine","cited_by":52,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Staphylococcus aureus; Methicillin-resistant Staphylococcus aureus; Staphylococcal infections; Microbiology; Biology; Veterinary medicine; Medicine; Bacteria; Genetics","score_opus":0.02586989836813442,"score_gpt":0.2733849908579208,"score_spread":0.24751509248978637,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4255921256","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.96604705,0.0026439112,0.0007874794,0.00020137345,0.0005416759,0.0008207615,0.000085470034,0.00046112304,0.028411137],"genre_scores_gemma":[0.9956982,0.00041179347,0.00066332147,0.0010919088,0.00028155357,0.00009184288,0.000032457756,0.00012149138,0.0016074409],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.996549,0.00018793813,0.0008322297,0.0008751414,0.0005755839,0.0009801233],"domain_scores_gemma":[0.9977505,0.00024988127,0.0002805243,0.0009263957,0.00028902286,0.00050362706],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00030493486,0.00057206163,0.00085161836,0.00065756636,0.00027200358,0.000048404945,0.00030604182,0.00024229063,0.001649683],"category_scores_gemma":[0.00095958315,0.00055639393,0.00048764984,0.001107043,0.00036769197,0.00023994844,0.000121324614,0.00062033307,0.00028155505],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0010258685,0.0011848129,0.8948824,0.00044782337,0.00030269293,0.00075685215,0.0011234868,0.000041803774,0.09462759,0.0014091921,0.003041262,0.0011562547],"study_design_scores_gemma":[0.004779758,0.0007087759,0.93540555,0.0010155119,0.0009458902,0.000021498376,0.00060782506,0.0001161409,0.030116657,0.002083043,0.022795552,0.0014037666],"about_ca_topic_score_codex":0.0011987177,"about_ca_topic_score_gemma":0.0063777934,"teacher_disagreement_score":0.06451093,"about_ca_system_score_codex":0.00020113886,"about_ca_system_score_gemma":0.00043130128,"threshold_uncertainty_score":0.99968874},"labels":[],"label_agreement":null},{"id":"W4280497319","doi":"10.3201/eid2806.212508","title":"Viral Zoonoses in Small Wild Mammals and Detection of Hantavirus, Spain","year":2022,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Viral Infections and Vectors","field":"Medicine","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Nova Scotia Health Authority","funders":"European Social Fund; Erasmus+; Instituto de Salud Carlos III; Universidad de Valladolid; Banco Santander","keywords":"Hantavirus; Arenavirus; Virology; Biology; Arvicolinae; Hantavirus Infection; Zoonosis; Transmission (telecommunications); Disease reservoir; Microtus; Lymphocytic choriomeningitis; Zoology; Virus; Immunology","score_opus":0.010601140603249253,"score_gpt":0.25104227144378066,"score_spread":0.2404411308405314,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4280497319","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9977187,0.00078889716,0.00016227408,0.00007581802,0.0002850492,0.00028679043,0.000026824353,0.00012573802,0.0005299463],"genre_scores_gemma":[0.9993684,0.000102993385,0.000015573694,0.00014549517,0.000087887034,0.00009447539,0.000014977141,0.00002346295,0.00014669349],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99904186,0.00011896643,0.00027054021,0.00023774711,0.0001268859,0.00020402114],"domain_scores_gemma":[0.9995623,0.000058515983,0.00009796016,0.0001573213,0.000030242427,0.000093625735],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00016331198,0.00013946783,0.0002637007,0.000423716,0.00022466028,0.000013294701,0.000035458525,0.000032339864,0.0002538465],"category_scores_gemma":[0.00011501078,0.00014421507,0.00010358386,0.00043674096,0.00006460853,0.00008220585,0.00008676344,0.00019976732,0.000002957143],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00016201682,0.0005651124,0.96168983,0.00011832604,0.00006249796,0.000034566117,0.00017500472,0.00048045337,0.014585977,0.00018251399,0.00006270756,0.021880986],"study_design_scores_gemma":[0.0026172977,0.0018410378,0.98088694,0.00009635142,0.00025987288,0.0002019552,0.00051163614,0.001764855,0.005065064,0.0005769485,0.0058317324,0.00034632834],"about_ca_topic_score_codex":0.001892188,"about_ca_topic_score_gemma":0.000590453,"teacher_disagreement_score":0.021534657,"about_ca_system_score_codex":0.00012719457,"about_ca_system_score_gemma":0.000051100764,"threshold_uncertainty_score":0.58809197},"labels":[],"label_agreement":null},{"id":"W4283214544","doi":"10.3201/eid2807.211528","title":"One Health Genomic Analysis of Extended-Spectrum β-Lactamase‒Producing <i>Salmonella enterica</i>, Canada, 2012‒2016","year":2022,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Antibiotic Resistance in Bacteria","field":"Biochemistry, Genetics and Molecular Biology","cited_by":14,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"Public Health Agency; Public Health Agency of Canada","keywords":"Salmonella enterica; Serotype; Salmonella; Biology; Plasmid; Cephalosporin; Microbiology; Subclade; Antibiotic resistance; Multiple drug resistance; Virology; Drug resistance; Antibiotics; Bacteria; Gene; Genetics; Clade; Phylogenetics","score_opus":0.0051398169826330576,"score_gpt":0.2284413818202224,"score_spread":0.22330156483758934,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4283214544","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99350876,0.004093722,0.00062712294,0.00039417614,0.00035716454,0.00018999442,0.0004409801,0.00003218728,0.00035590702],"genre_scores_gemma":[0.9979448,0.00043436396,0.000040539355,0.00043430077,0.00013552496,0.00001991233,0.000478615,0.00003720207,0.00047478074],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99813426,0.00018598844,0.00043128885,0.0005554772,0.0002853119,0.0004077006],"domain_scores_gemma":[0.9987677,0.000020447293,0.00037991628,0.00062805036,0.00004395149,0.0001599369],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00017522958,0.00019798383,0.0004145453,0.00018608032,0.00033383231,0.000016894437,0.00024042114,0.00002859601,0.0003991446],"category_scores_gemma":[0.000048206683,0.0002354484,0.00021986962,0.00051484664,0.00006668432,0.0000063701623,0.0002512441,0.00010232612,0.0000014053377],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003536868,0.0011707797,0.7805475,0.0002059779,0.0043342724,0.000021868336,0.00019398324,0.024437686,0.15358384,0.00017706455,0.032401856,0.0025714855],"study_design_scores_gemma":[0.00052071153,0.00040475916,0.97533,0.00001948522,0.00066402426,0.0000093135695,0.00021838922,0.00018179092,0.003752249,0.00004658888,0.01838178,0.00047093394],"about_ca_topic_score_codex":0.077481546,"about_ca_topic_score_gemma":0.065883815,"teacher_disagreement_score":0.19478248,"about_ca_system_score_codex":0.000266452,"about_ca_system_score_gemma":0.0007968245,"threshold_uncertainty_score":0.96013075},"labels":[],"label_agreement":null},{"id":"W4286484966","doi":"10.3201/eid2808.220464","title":"Increasing and More Commonly Refractory <i>Mycobacterium avium</i> Pulmonary Disease, Toronto, Ontario, Canada","year":2022,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Mycobacterium research and diagnosis","field":"Medicine","cited_by":9,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"West Park Healthcare Centre; Toronto Western Hospital; University of Toronto; University Health Network","funders":"","keywords":"Sputum; Mycobacterium avium complex; Culture conversion; Medicine; Internal medicine; Mycobacterium avium-intracellulare infection; Nontuberculous mycobacteria; Retrospective cohort study; Sputum culture; Pulmonary disease; Mycobacterium; Cohort study; Tuberculosis; Pathology","score_opus":0.00694333183601669,"score_gpt":0.2400312355504121,"score_spread":0.2330879037143954,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4286484966","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98676944,0.005383503,0.0000018674276,0.0009456314,0.00055815047,0.0004591232,0.00045144683,0.00019717336,0.0052336403],"genre_scores_gemma":[0.99546915,0.00026451057,0.000013065551,0.0021701741,0.0002925383,0.00027552285,0.00059685163,0.00005789396,0.00086027326],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99753404,0.00023470787,0.00031558218,0.00051496684,0.00079218677,0.0006085261],"domain_scores_gemma":[0.9978487,0.00025757932,0.00011129744,0.00049436657,0.00010314652,0.0011848921],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00017065935,0.00030845008,0.00039371077,0.00009746244,0.00081403146,0.00006818106,0.00013922871,0.00003425492,0.004831485],"category_scores_gemma":[0.0002777883,0.0003228736,0.00013258596,0.00018513692,0.0000919109,0.00028336348,0.0003965867,0.00041323007,0.0000033076396],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0007755292,0.0005795338,0.97276574,0.00021204367,0.000099139055,0.0010190638,0.00015393812,0.00002058837,0.0004308423,0.000021685679,0.022123255,0.001798628],"study_design_scores_gemma":[0.0007244149,0.00019684677,0.8581098,0.000054144148,0.000246889,0.00029650982,0.00029744054,0.000074381875,0.000009264389,0.000027159245,0.13965501,0.0003081607],"about_ca_topic_score_codex":0.96413517,"about_ca_topic_score_gemma":0.85417247,"teacher_disagreement_score":0.11753175,"about_ca_system_score_codex":0.0024897386,"about_ca_system_score_gemma":0.0025752294,"threshold_uncertainty_score":0.99992234},"labels":[],"label_agreement":null},{"id":"W4292680240","doi":"10.3201/eid2809.220092","title":"Costs of Tuberculosis at 3 Treatment Centers, Canada, 2010–2016","year":2022,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Tuberculosis Research and Epidemiology","field":"Medicine","cited_by":20,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"Canadian Institutes of Health Research; McGill University Health Centre; McGill University","keywords":"Isoniazid; Medicine; Interquartile range; Tuberculosis; Multi-drug-resistant tuberculosis; Internal medicine; Retrospective cohort study; Extensively drug-resistant tuberculosis; Mycobacterium tuberculosis; Pediatrics; Pathology","score_opus":0.012457240188528923,"score_gpt":0.27987677414381995,"score_spread":0.26741953395529106,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4292680240","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9891252,0.0026705652,0.0000048072475,0.004033575,0.00054285966,0.00037389374,0.00048161254,0.00007451874,0.002692995],"genre_scores_gemma":[0.9956785,0.00062304735,0.0000053784424,0.0010082535,0.00010948734,0.0001820031,0.00024394563,0.000025312338,0.002124059],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99836385,0.00023077482,0.00029131648,0.00029525094,0.0003738815,0.00044493502],"domain_scores_gemma":[0.9989269,0.00020527808,0.00009242655,0.00033863643,0.00006616659,0.00037061406],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00010408138,0.00017131225,0.00040389976,0.00015682876,0.0003299696,0.0000035507082,0.00007981482,0.000025798952,0.00267149],"category_scores_gemma":[0.00022826737,0.0001465309,0.00020083494,0.0002206077,0.00006635544,0.00003188372,0.00015809496,0.00011961343,0.00001622914],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00023848009,0.0005316965,0.80378133,0.000040491475,0.00041015513,0.000089317364,0.00004879181,0.0004231111,0.00070176926,0.00004419334,0.18942088,0.0042697806],"study_design_scores_gemma":[0.0031149674,0.0017556614,0.84034085,0.00005483447,0.00040980952,0.00019376256,0.00022055297,0.0005163794,0.0007327301,0.000031053485,0.15235054,0.0002788688],"about_ca_topic_score_codex":0.6385207,"about_ca_topic_score_gemma":0.18488924,"teacher_disagreement_score":0.45363146,"about_ca_system_score_codex":0.0026599364,"about_ca_system_score_gemma":0.0006390183,"threshold_uncertainty_score":0.99824023},"labels":[],"label_agreement":null},{"id":"W4306168141","doi":"10.3201/eid2812.221160","title":"Monkeypox Virus Detection in Different Clinical Specimen Types","year":2022,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Poxvirus research and outbreaks","field":"Immunology and Microbiology","cited_by":28,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Queen's University; Public Health Ontario; University of Toronto","funders":"","keywords":"Monkeypox; Virology; Virus; Medicine; Biology; Vaccinia; Genetics","score_opus":0.01692279567327757,"score_gpt":0.30044216064322526,"score_spread":0.2835193649699477,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4306168141","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9934724,0.0024775418,0.00004204928,0.00009297767,0.0014972466,0.00022052188,0.00008660339,0.0001800635,0.0019305787],"genre_scores_gemma":[0.9982182,0.00020138912,7.5537656e-7,0.00014600751,0.00012864695,0.00014071044,0.00006844868,0.00001926655,0.0010765798],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9982142,0.0006237861,0.00032172247,0.0003320909,0.000079760925,0.0004284645],"domain_scores_gemma":[0.9994088,0.00020025493,0.00007702286,0.0002332662,0.000022199334,0.000058460675],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00020942773,0.00015696284,0.00026162376,0.00024772884,0.00042502483,0.00001660122,0.00017825892,0.00006955175,0.0038059233],"category_scores_gemma":[0.00019844083,0.00014417319,0.00016358787,0.00024519488,0.000105633895,0.000067159424,0.00026117134,0.0005617068,0.00037246718],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0011009478,0.0030977223,0.75957936,0.000033915127,0.0005073868,0.00010966472,0.00037801973,0.0005478559,0.07252835,0.00030405182,0.012493992,0.14931874],"study_design_scores_gemma":[0.0040679006,0.0010493807,0.75870895,0.000016439082,0.00008879845,0.00006475534,0.00026077215,0.00012275597,0.015812857,0.0012490278,0.21804596,0.0005123694],"about_ca_topic_score_codex":0.0007152596,"about_ca_topic_score_gemma":0.00051750895,"teacher_disagreement_score":0.20555197,"about_ca_system_score_codex":0.00016458776,"about_ca_system_score_gemma":0.000057529254,"threshold_uncertainty_score":0.9971047},"labels":[],"label_agreement":null},{"id":"W4307429891","doi":"10.3201/eid2811.212382","title":"Jamestown Canyon Virus in Collected Mosquitoes, Maine, United States, 2017–2019","year":2022,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Mosquito-borne diseases and control","field":"Medicine","cited_by":9,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"Centers for Disease Control and Prevention; U.S. Department of Health and Human Services","keywords":"Arbovirus; Canyon; Clade; Virology; Aedes; Phylogenetic tree; Biology; Geography; Virus; Dengue fever; Cartography; Genetics; Gene","score_opus":0.00607471874647309,"score_gpt":0.24955145041049134,"score_spread":0.24347673166401826,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4307429891","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98876464,0.005005945,0.000038726044,0.001060707,0.00070828915,0.0010285655,0.0009904117,0.00050741254,0.0018952839],"genre_scores_gemma":[0.99028313,0.0005346302,0.000009032342,0.00298957,0.00023496905,0.000579468,0.002313819,0.00008188884,0.0029735062],"study_design_codex":"not_applicable","study_design_gemma":"observational","domain_scores_codex":[0.997332,0.00026237272,0.0005018217,0.0005986151,0.0006022534,0.0007029864],"domain_scores_gemma":[0.99851465,0.0001253364,0.00017808352,0.00058406434,0.00014554652,0.00045233467],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00017288294,0.00035512703,0.00053164596,0.0008448684,0.0005137982,0.000056027948,0.00019854,0.0000592371,0.0027832862],"category_scores_gemma":[0.0002372712,0.00037121805,0.000247045,0.002001718,0.00007127475,0.00010413818,0.00018850721,0.00042696457,0.000040696756],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0029861075,0.005771219,0.4679315,0.00036138645,0.0007058078,0.0026113447,0.0010994966,0.04105288,0.001633743,0.00085946656,0.4680264,0.006960642],"study_design_scores_gemma":[0.0134930415,0.0014977916,0.5734511,0.00015259166,0.00096391776,0.00022201474,0.0013710044,0.023804074,0.00004883395,0.00058389857,0.38337144,0.001040306],"about_ca_topic_score_codex":0.010481511,"about_ca_topic_score_gemma":0.00091952103,"teacher_disagreement_score":0.10551956,"about_ca_system_score_codex":0.00064303546,"about_ca_system_score_gemma":0.000569494,"threshold_uncertainty_score":0.999874},"labels":[],"label_agreement":null},{"id":"W4313236350","doi":"10.3201/eid2901.220930","title":"Genomic Confirmation of <i>Borrelia garinii</i>, United States","year":2023,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Vector-borne infectious diseases","field":"Immunology and Microbiology","cited_by":10,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"Biologické Centrum, Akademie Věd České Republiky; National Institutes of Health; National Institute of Allergy and Infectious Diseases; Steven and Alexandra Cohen Foundation; Akademie Věd České Republiky; Ministerstvo Zdravotnictví Ceské Republiky; Global Lyme Alliance","keywords":"Borrelia garinii; Borrelia; Lyme disease; Borrelia burgdorferi; Biology; Sensu; Genetics; Virology; Zoology","score_opus":0.008958437451923363,"score_gpt":0.2441141671725418,"score_spread":0.23515572972061843,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4313236350","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99383813,0.0013853445,0.000120049,0.00011671816,0.0013703719,0.00031202074,0.00037176284,0.001428749,0.001056868],"genre_scores_gemma":[0.99612147,0.00057025114,0.0000022085305,0.00023967326,0.00005975062,0.00007601795,0.002389551,0.000049548154,0.0004915246],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9983938,0.00023000407,0.00047374642,0.00034887626,0.000077219935,0.00047635703],"domain_scores_gemma":[0.9987624,0.00031409695,0.00026063595,0.00038902348,0.00020572938,0.00006806157],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00014004862,0.0002718904,0.00035672364,0.0007533702,0.00028686642,0.00002659255,0.00019170502,0.00013258228,0.0011016958],"category_scores_gemma":[0.00029539666,0.00028027777,0.00020720453,0.0010727278,0.00024346552,0.00013677869,0.000121255514,0.00017382845,0.0017656841],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001591742,0.00069467723,0.8743157,0.00025765196,0.0009847318,0.000021514066,0.000932249,0.014330074,0.037247974,0.0019098406,0.06654764,0.002598804],"study_design_scores_gemma":[0.0030993265,0.0004411065,0.90334177,0.0001182112,0.00054289465,0.000052967385,0.0006614332,0.0007241072,0.009184923,0.0018326204,0.07923387,0.0007667788],"about_ca_topic_score_codex":0.0010646115,"about_ca_topic_score_gemma":0.000060641483,"teacher_disagreement_score":0.029026097,"about_ca_system_score_codex":0.00007681326,"about_ca_system_score_gemma":0.00010492411,"threshold_uncertainty_score":0.99996495},"labels":[],"label_agreement":null},{"id":"W4313236592","doi":"10.3201/eid2901.220988","title":"Using Serum Specimens for Real-Time PCR-Based Diagnosis of Human Granulocytic Anaplasmosis, Canada","year":2023,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Vector-borne infectious diseases","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of Manitoba; Nova Scotia Health Authority; Dalhousie University","funders":"","keywords":"Anaplasmosis; Anaplasma; Serology; Anaplasma phagocytophilum; Blood smear; Biology; Anaplasmataceae; Real-time polymerase chain reaction; Veterinary medicine; Medicine; Virology; Immunology; Gene; Antibody; Tick; Genetics","score_opus":0.018470143341800447,"score_gpt":0.271858607436626,"score_spread":0.2533884640948255,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4313236592","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99475914,0.00057925575,0.000044234785,0.00009535065,0.0010355749,0.0006958477,0.0017300494,0.00071257853,0.00034798062],"genre_scores_gemma":[0.99836093,0.0000708195,0.000011287971,0.00011697707,0.0001045303,0.00027091097,0.0006915938,0.000088778615,0.00028419224],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.997794,0.00020400948,0.00055489776,0.00054731715,0.00012356108,0.00077626755],"domain_scores_gemma":[0.9981552,0.00069412694,0.00031441325,0.0004984502,0.00022097968,0.0001168652],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00014218374,0.00039658922,0.00060523464,0.00043890602,0.00071353343,0.00002621631,0.00023394986,0.0001486748,0.0011902526],"category_scores_gemma":[0.00034540246,0.00042989632,0.00035072182,0.00078115816,0.00021283858,0.00010729607,0.00008326199,0.00013461709,0.000085604865],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013575953,0.0007469659,0.84931934,0.00044797905,0.0010518122,0.000037367856,0.00008520082,0.010108508,0.07130769,0.0004213689,0.06585729,0.00048072368],"study_design_scores_gemma":[0.012287438,0.0018243834,0.8110528,0.0007375951,0.003394623,0.00004812515,0.00036777183,0.0028404472,0.14629504,0.0011445251,0.017282672,0.0027245542],"about_ca_topic_score_codex":0.16587526,"about_ca_topic_score_gemma":0.092315085,"teacher_disagreement_score":0.074987344,"about_ca_system_score_codex":0.00045644736,"about_ca_system_score_gemma":0.00088843267,"threshold_uncertainty_score":0.9998153},"labels":[],"label_agreement":null},{"id":"W4313236957","doi":"10.3201/eid2901.220154","title":"Widespread Exposure to Mosquitoborne California Serogroup Viruses in Caribou, Arctic Fox, Red Fox, and Polar Bears, Canada","year":2023,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Viral Infections and Vectors","field":"Medicine","cited_by":18,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"Natural Sciences and Engineering Research Council of Canada; Churchill Northern Studies Centre; Environment and Climate Change Canada; Canadian Wildlife Federation; World Wildlife Fund; Parks Canada; ArcticNet; Nunavut Arctic College; Quark Expeditions; Polar Knowledge Canada","keywords":"Arctic fox; Arctic; Geography; The arctic; Virology; Biology; Ecology; Oceanography; Lagopus","score_opus":0.011788686738748921,"score_gpt":0.2644978712512939,"score_spread":0.252709184512545,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4313236957","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9962699,0.0008571432,0.000015916541,0.00095557724,0.000582583,0.0005080385,0.00024507448,0.0003863341,0.00017945399],"genre_scores_gemma":[0.99819374,0.00010815612,0.000011571073,0.0010677613,0.00015550322,0.00012308543,0.0001256207,0.000058589678,0.00015595062],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9982513,0.00007949983,0.00035929336,0.00045633398,0.0003087337,0.000544803],"domain_scores_gemma":[0.9990294,0.0001299203,0.0000658537,0.0003404761,0.0000950827,0.00033928338],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00013847297,0.000280559,0.00040307106,0.00045068498,0.00026132565,0.000057507812,0.00006913118,0.00008279157,0.00010524726],"category_scores_gemma":[0.0005839694,0.0002741344,0.000095659736,0.0013340926,0.000052377356,0.00012456543,0.00010033384,0.00023229314,0.00003064023],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000064321765,0.00013225673,0.988864,0.00016462698,0.00010154126,0.00018389482,0.00013142283,0.0006684652,0.0010417332,0.000029542354,0.00641465,0.0022035458],"study_design_scores_gemma":[0.0011444432,0.00041437944,0.96741885,0.000275432,0.00017623145,0.000054408392,0.00019625254,0.00021315207,0.00018876676,0.00010121734,0.029481007,0.00033587991],"about_ca_topic_score_codex":0.55354697,"about_ca_topic_score_gemma":0.47340557,"teacher_disagreement_score":0.08014139,"about_ca_system_score_codex":0.00039537114,"about_ca_system_score_gemma":0.00034267205,"threshold_uncertainty_score":0.9999711},"labels":[],"label_agreement":null},{"id":"W4317871457","doi":"10.3201/eid2902.221379","title":"Nipah Virus Exposure in Domestic and Peridomestic Animals Living in Human Outbreak Sites, Bangladesh, 2013–2015","year":2023,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Virology and Viral Diseases","field":"Medicine","cited_by":16,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Public Health Agency of Canada","funders":"National Institute of Allergy and Infectious Diseases; National Institutes of Health; Advanced Research Projects Agency; Defense Advanced Research Projects Agency; Centers for Disease Control and Prevention; International Centre for Diarrhoeal Disease Research, Bangladesh","keywords":"Outbreak; Virology; Biology; Hendra Virus; Disease reservoir; Virus; CATS; Veterinary medicine; Spillover effect; Ebola virus; Medicine","score_opus":0.014415209707502817,"score_gpt":0.3125241484822304,"score_spread":0.2981089387747276,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4317871457","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99271524,0.0056102183,0.0000035198857,0.00036813252,0.00014731126,0.00038317428,0.000048025868,0.00041869137,0.00030569822],"genre_scores_gemma":[0.9984387,0.0005527344,0.000005079553,0.00030857802,0.00016766485,0.0001290583,0.00008496648,0.000047600992,0.0002655901],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99821365,0.0001653686,0.0003911065,0.00048533207,0.00020760913,0.00053691666],"domain_scores_gemma":[0.99902177,0.00029849738,0.00007944713,0.0002742222,0.000038249895,0.0002878072],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00022639304,0.00028574694,0.00047964408,0.000777516,0.00017935279,0.000038905302,0.00008155717,0.00013086248,0.00034400576],"category_scores_gemma":[0.00091262674,0.00028317596,0.000101018944,0.00079552876,0.00016564522,0.00016564147,0.00012576317,0.00027088393,0.0001090547],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010522296,0.00041005117,0.99316895,0.00026723766,0.000043472406,0.00080520276,0.00047497568,0.0002479983,0.0019247957,0.000083610794,0.001985159,0.00048331937],"study_design_scores_gemma":[0.0016964317,0.00051864283,0.9950882,0.00040431938,0.00015817021,0.00008432305,0.0001993994,0.000623041,0.000008766544,0.00066755264,0.00027058253,0.00028054687],"about_ca_topic_score_codex":0.00056181935,"about_ca_topic_score_gemma":0.0009771495,"teacher_disagreement_score":0.0057234988,"about_ca_system_score_codex":0.00008877086,"about_ca_system_score_gemma":0.000088154935,"threshold_uncertainty_score":0.99996203},"labels":[],"label_agreement":null},{"id":"W4323347521","doi":"10.3201/eid2904.221594","title":"Experimental Infection of North American Deer Mice with Clade I and II Monkeypox Virus Isolates","year":2023,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Poxvirus research and outbreaks","field":"Immunology and Microbiology","cited_by":11,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canadian Mennonite University; Public Health Agency of Canada","funders":"National Institute of Allergy and Infectious Diseases; National Institutes of Health; Public Health Agency; Public Health Agency of Canada","keywords":"Monkeypox; Enzootic; Clade; Virology; Biology; Virus; Transmission (telecommunications); Disease reservoir; Phylogenetics; Gene; Genetics","score_opus":0.007939861104855348,"score_gpt":0.2591547936646836,"score_spread":0.25121493255982824,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4323347521","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9977166,0.0013188407,0.00003398858,0.00004138289,0.0001399788,0.00016731385,0.00007831961,0.00028541283,0.00021814133],"genre_scores_gemma":[0.9990031,0.0004576806,0.0000048446655,0.000053679178,0.000032348657,0.000053295953,0.00009856159,0.000023070728,0.00027340915],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9990375,0.00009649601,0.00016819965,0.00026532117,0.000051769613,0.000380695],"domain_scores_gemma":[0.99954087,0.00008578807,0.00010024096,0.00015317682,0.00005310791,0.000066829336],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0000379227,0.00017164383,0.00023905019,0.00025377938,0.00036590916,0.000013806229,0.000070713,0.00003932743,0.00009516216],"category_scores_gemma":[0.000058329373,0.0001454763,0.00006366346,0.00054073636,0.00041465848,0.00016064371,0.00013159506,0.00015595864,0.0000964461],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002975223,0.00032764723,0.83481145,0.000033697102,0.0003227741,0.000008502077,0.0005085644,0.000115494564,0.15361913,0.00002963527,0.002180775,0.0077448115],"study_design_scores_gemma":[0.001101573,0.0011591659,0.91851354,0.000024574714,0.000065630775,0.000034599194,0.00012032796,0.000037666232,0.071270086,0.000014514051,0.007417626,0.00024067223],"about_ca_topic_score_codex":0.0034077987,"about_ca_topic_score_gemma":0.0012859252,"teacher_disagreement_score":0.08370212,"about_ca_system_score_codex":0.00003171791,"about_ca_system_score_gemma":0.000044672717,"threshold_uncertainty_score":0.59323514},"labels":[],"label_agreement":null},{"id":"W4324304740","doi":"10.3201/eid2904.230058","title":"Orf Nodule with Erythema Multiforme during a Monkeypox Outbreak, France, 2022","year":2023,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Poxvirus research and outbreaks","field":"Immunology and Microbiology","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institute of Allergy and Infectious Diseases; National Institutes of Health; Public Health Agency; Public Health Agency of Canada","keywords":"Nodule (geology); Erythema multiforme; Monkeypox; Medicine; Outbreak; Dermatology; Erythema; Pathology; Virology; Biology","score_opus":0.006411014613474907,"score_gpt":0.24118434031254082,"score_spread":0.23477332569906592,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4324304740","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99324316,0.0014241417,0.00003982717,0.00015129636,0.0004713574,0.00031535458,0.00019279626,0.0010880572,0.0030740155],"genre_scores_gemma":[0.98598933,0.00030874755,0.000006450924,0.000089731395,0.000112348804,0.00018716116,0.00019580129,0.00005500345,0.013055416],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99814814,0.00010831917,0.0002359035,0.00046430802,0.00011931661,0.00092401786],"domain_scores_gemma":[0.9991688,0.00012458734,0.00008630849,0.0004137429,0.00008934,0.000117216085],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00010874524,0.00028027716,0.00031295855,0.0003991702,0.000701691,0.000042791547,0.00022944936,0.00012047197,0.0012090015],"category_scores_gemma":[0.00017630807,0.00023046198,0.000150946,0.00077891146,0.0002215914,0.00021066792,0.00018292919,0.00033880165,0.0036650274],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00062796223,0.00066775916,0.8697976,0.00028689904,0.0010478701,0.0004207372,0.0009483807,0.00072274276,0.09156135,0.00025750202,0.020304032,0.0133572025],"study_design_scores_gemma":[0.008481216,0.00056778797,0.8424898,0.0002516208,0.00017697191,0.00039380015,0.0006015054,0.00017158089,0.02963724,0.00040030756,0.11564218,0.0011860307],"about_ca_topic_score_codex":0.00041537057,"about_ca_topic_score_gemma":0.00014225888,"teacher_disagreement_score":0.09533815,"about_ca_system_score_codex":0.00006772512,"about_ca_system_score_gemma":0.00009911169,"threshold_uncertainty_score":0.999704},"labels":[],"label_agreement":null},{"id":"W4360813076","doi":"10.3201/eid2904.220778","title":"Global Veterinary Diagnostic Laboratory Equipment Management and Sustainability and Implications for Pandemic Preparedness Priorities1","year":2023,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Animal Disease Management and Epidemiology","field":"Agricultural and Biological Sciences","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Global Affairs Canada; Wellcome Trust","keywords":"Preparedness; Sustainability; Mandate; Pandemic; Business; Personal protective equipment; Coronavirus disease 2019 (COVID-19); Veterinary medicine; Medicine; Political science; Management; Economics; Pathology","score_opus":0.023476046616287903,"score_gpt":0.30303892226646106,"score_spread":0.2795628756501732,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4360813076","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99625516,0.0010845053,0.000050422837,0.00091379014,0.000092792536,0.0007052967,0.00034086496,0.0003896059,0.00016753945],"genre_scores_gemma":[0.99797773,0.0009317946,0.00000714177,0.00019631229,0.00009042897,0.00058128417,0.00014182403,0.0000015221992,0.00007197266],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9990188,0.00007245766,0.00016528447,0.00037584765,0.00005766262,0.00030995646],"domain_scores_gemma":[0.9992256,0.0004611793,0.000050234845,0.00006409703,0.00006087511,0.00013799679],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00016993454,0.00013422458,0.00014995816,0.000019598221,0.00038862706,0.000048126036,0.000080687605,0.00003637986,0.00001760264],"category_scores_gemma":[0.00031541658,0.00007347501,0.00005179322,0.00030898463,0.00010261161,0.00009979366,0.00024647053,0.000022619923,0.0000028501609],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000031635638,0.000063280015,0.9721073,0.00021577012,0.000041137955,0.0000039123956,0.000032640204,0.00003261335,0.000027863154,0.0035633524,0.0031475897,0.020732885],"study_design_scores_gemma":[0.00017329308,0.00019890488,0.965405,0.000013904613,0.000079357254,0.0000014602076,0.0005631184,0.00013676986,9.9002975e-8,0.018614378,0.014666846,0.00014690057],"about_ca_topic_score_codex":0.00007798733,"about_ca_topic_score_gemma":0.000054244683,"teacher_disagreement_score":0.020585986,"about_ca_system_score_codex":0.00009008601,"about_ca_system_score_gemma":0.0000104704795,"threshold_uncertainty_score":0.2996224},"labels":[],"label_agreement":null},{"id":"W4379417113","doi":"10.3201/eid2907.230216","title":"Pulmonary Nontuberculous Mycobacteria, Ontario, Canada, 2020","year":2023,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Mycobacterium research and diagnosis","field":"Medicine","cited_by":14,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Nontuberculous mycobacteria; Mycobacterium avium complex; Lung disease; Medicine; Mycobacterium; Pulmonary disease; Mycobacterium avium-intracellulare infection; Microbiology; Lung; Internal medicine; Tuberculosis; Biology; Pathology","score_opus":0.007689672832081462,"score_gpt":0.2469569637289747,"score_spread":0.23926729089689322,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4379417113","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97853214,0.00026226166,0.0000025840304,0.0012222325,0.0008688044,0.00035817863,0.0001237684,0.0005206729,0.018109383],"genre_scores_gemma":[0.99276817,0.00025396066,0.000005755421,0.0007569131,0.00057428743,0.00015371236,0.0005125412,0.000046975558,0.00492769],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9980257,0.000053477037,0.00026347424,0.00041164955,0.0005540714,0.0006916075],"domain_scores_gemma":[0.99852526,0.00015269527,0.000054120403,0.00040651427,0.00012761225,0.000733801],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00009249067,0.00023829957,0.00033907074,0.00017708773,0.00024336323,0.00005473639,0.00010918932,0.000062590334,0.0049661486],"category_scores_gemma":[0.00034904733,0.00022744255,0.00016284401,0.000654353,0.000045511413,0.0001249312,0.00011623143,0.0002351081,0.00040669125],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000093107425,0.00016746053,0.84222835,0.00013055968,0.00012455534,0.002291234,0.00007130257,0.000026628055,0.00071183033,0.00001718387,0.15167244,0.0024653382],"study_design_scores_gemma":[0.00058355374,0.00013650794,0.9319015,0.00008541367,0.00012361504,0.00018875695,0.00005411911,0.00012735094,0.00012017707,0.00007793886,0.066362835,0.00023821881],"about_ca_topic_score_codex":0.9100166,"about_ca_topic_score_gemma":0.87937313,"teacher_disagreement_score":0.089673154,"about_ca_system_score_codex":0.00067750964,"about_ca_system_score_gemma":0.001953883,"threshold_uncertainty_score":0.9959434},"labels":[],"label_agreement":null},{"id":"W4380422238","doi":"10.3201/eid2907.230198","title":"Sensitivity to Neutralizing Antibodies and Resistance to Type I Interferons in SARS-CoV-2 R.1 Lineage Variants, Canada","year":2023,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"SARS-CoV-2 and COVID-19 Research","field":"Medicine","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"Canadian Institutes of Health Research","keywords":"Virology; Antibody; Neutralization; Biology; Lineage (genetic); Virus; Neutralizing antibody; Pandemic; Immunology; Coronavirus disease 2019 (COVID-19); Genetics; Gene; Medicine; Infectious disease (medical specialty)","score_opus":0.029839291157368785,"score_gpt":0.3388521550534849,"score_spread":0.30901286389611615,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4380422238","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99615145,0.000271257,0.00007286404,0.0013984249,0.00033271356,0.00039398108,0.00004468803,0.00022001973,0.001114586],"genre_scores_gemma":[0.9819455,0.000018254088,0.00002992448,0.017718146,0.00014103341,0.000028278937,0.0000070893857,0.00003559096,0.00007618136],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99841106,0.000100241574,0.00023460138,0.0004429597,0.00029373262,0.00051739276],"domain_scores_gemma":[0.9992143,0.00022475555,0.000030539883,0.0002976123,0.00012357405,0.00010924089],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00023910732,0.00019925363,0.00033320708,0.0004490406,0.00015188329,0.000054719214,0.00006700498,0.000044720065,0.0000031901263],"category_scores_gemma":[0.0009816376,0.00020232574,0.00004530442,0.0013477108,0.00004245254,0.0000858913,0.00016690388,0.00019029778,0.000036753714],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00040600568,0.000121645986,0.8518672,0.00033943923,0.00008289304,0.0014974939,0.0006780682,0.00004474039,0.11932393,0.000101759375,0.024669027,0.0008678169],"study_design_scores_gemma":[0.0011106682,0.00025934874,0.88230515,0.00074016454,0.00007870614,0.00003714467,0.00038128172,0.00068070454,0.05158413,0.00007969079,0.062235925,0.0005070913],"about_ca_topic_score_codex":0.16868822,"about_ca_topic_score_gemma":0.6858804,"teacher_disagreement_score":0.51719224,"about_ca_system_score_codex":0.00025143992,"about_ca_system_score_gemma":0.00049078744,"threshold_uncertainty_score":0.83684754},"labels":[],"label_agreement":null},{"id":"W4380841341","doi":"10.3201/eid2907.230218","title":"Isolation of <i>Elizabethkingia</i> spp. from Diagnostic Specimens from Dogs and Cats, United States, 2019–2021","year":2023,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Infections and bacterial resistance","field":"Biochemistry, Genetics and Molecular Biology","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"","keywords":"CATS; Veterinary medicine; Isolation (microbiology); Medicine; Biology; Microbiology; Internal medicine","score_opus":0.0041376551231998805,"score_gpt":0.2247713851930182,"score_spread":0.22063373006981832,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4380841341","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99551606,0.001581526,0.0009802687,0.0000594086,0.00043390255,0.00012247547,0.0010822735,0.00005541217,0.00016866661],"genre_scores_gemma":[0.9896021,0.004104423,0.00006443379,0.000088113185,0.00043229002,0.000017271765,0.0055232225,0.000026685155,0.00014149073],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99910134,0.000068726615,0.0002154405,0.00031355672,0.000104120016,0.0001968144],"domain_scores_gemma":[0.9992975,0.00015848472,0.00011444521,0.0002491014,0.00009653241,0.00008392891],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000053483196,0.00015600107,0.000161994,0.00010810903,0.00013572372,0.000038515675,0.00006276035,0.000080972015,0.00019176921],"category_scores_gemma":[0.00029553715,0.0001610246,0.00006913393,0.00031263632,0.000069525595,0.000009668641,0.000087068474,0.00005549869,0.000030293526],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013329997,0.00023248093,0.4818818,0.000048810187,0.0003482492,0.000015977852,0.00017222691,0.0023976506,0.48721704,0.000093666145,0.02489247,0.0025663518],"study_design_scores_gemma":[0.0016230008,0.00032606203,0.87174284,0.0001711107,0.00030096158,0.000002491345,0.00014101602,0.00091969024,0.0343623,0.0017908721,0.08796502,0.00065461965],"about_ca_topic_score_codex":0.0036079674,"about_ca_topic_score_gemma":0.00031520193,"teacher_disagreement_score":0.45285472,"about_ca_system_score_codex":0.000017432054,"about_ca_system_score_gemma":0.00003850033,"threshold_uncertainty_score":0.6566392},"labels":[],"label_agreement":null},{"id":"W4382502043","doi":"10.3201/eid2908.221580","title":"Omicron COVID-19 Case Estimates Based on Previous SARS-CoV-2 Wastewater Load, Regional Municipality of Peel, Ontario, Canada","year":2023,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"SARS-CoV-2 detection and testing","field":"Medicine","cited_by":25,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"University of Waterloo","keywords":"Wastewater; Coronavirus disease 2019 (COVID-19); Outbreak; Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2); 2019-20 coronavirus outbreak; Sampling (signal processing); Veterinary medicine; Environmental science; Medicine; Environmental engineering; Virology; Internal medicine; Telecommunications; Disease; Engineering","score_opus":0.04943271971158212,"score_gpt":0.32433865655107696,"score_spread":0.2749059368394948,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4382502043","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9967655,0.0001220932,0.00003978084,0.00047094194,0.00045484994,0.00046530121,0.00007085011,0.00059757644,0.0010130923],"genre_scores_gemma":[0.9945139,0.000004111716,0.000054016455,0.0049624024,0.00010769026,0.00006692523,0.00008362505,0.00005447184,0.00015283797],"study_design_codex":"observational","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99784344,0.00011262022,0.00050516025,0.0005021707,0.00055740133,0.00047921322],"domain_scores_gemma":[0.998237,0.00055062666,0.00022480928,0.0005665845,0.00019310758,0.0002278662],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0002722753,0.00033790042,0.00048815922,0.0003029935,0.0003581818,0.000030956377,0.00010365753,0.00008643352,0.00017031131],"category_scores_gemma":[0.0015493016,0.00031990104,0.00021464047,0.0005684646,0.0001270077,0.0000749444,0.000065802065,0.00027492715,0.000027175554],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0013295122,0.0013843854,0.7922625,0.002407099,0.000623226,0.0130950995,0.0022369188,0.011616822,0.090626456,0.0000590798,0.082891606,0.0014672993],"study_design_scores_gemma":[0.025962666,0.0032361457,0.082460724,0.0026205666,0.0033894419,0.012082694,0.0018953008,0.09621252,0.58161324,0.00074554555,0.18611339,0.003667728],"about_ca_topic_score_codex":0.93610066,"about_ca_topic_score_gemma":0.8834512,"teacher_disagreement_score":0.7098018,"about_ca_system_score_codex":0.0016657388,"about_ca_system_score_gemma":0.0032513489,"threshold_uncertainty_score":0.9999253},"labels":[],"label_agreement":null},{"id":"W4384257605","doi":"10.3201/eid2908.230323","title":"Multidrug Resistant <i>Shigella sonnei</i> Bacteremia among Persons Experiencing Homelessness, Vancouver, British Columbia, Canada","year":2023,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Escherichia coli research studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":14,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Shigella sonnei; Shigella; Bacteremia; Shigellosis; Genotype; Multiple drug resistance; Medicine; Transmission (telecommunications); Virology; Microbiology; Biology; Drug resistance; Antibiotics; Salmonella; Genetics; Bacteria","score_opus":0.004382714662451338,"score_gpt":0.21774473549259293,"score_spread":0.2133620208301416,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4384257605","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99641526,0.0010782556,0.000014889096,0.000024499499,0.000742731,0.00026592298,0.00021332836,0.0001839486,0.0010611393],"genre_scores_gemma":[0.9944218,0.00059605576,0.000013067683,0.00012109861,0.00034402445,0.00021630245,0.00013685401,0.000064562,0.0040862565],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9979041,0.000112012065,0.00025070808,0.0006048532,0.00040527893,0.00072300294],"domain_scores_gemma":[0.9990188,0.000059496,0.000099588484,0.00038459603,0.00015668997,0.0002808348],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00012651947,0.0002111385,0.00027411213,0.00004594366,0.0008031933,0.0002204172,0.00024223828,0.000083038416,0.00007999023],"category_scores_gemma":[0.0004974818,0.0003169991,0.00014067504,0.0004606727,0.00016584575,0.000016110882,0.000334769,0.00015998312,0.0000043466234],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00002156863,0.00007998481,0.7345275,0.00012452016,0.00016740021,0.00017318364,0.00031363862,0.00021305558,0.018226402,7.7635025e-7,0.24512114,0.0010308266],"study_design_scores_gemma":[0.0015251505,0.00018550306,0.86269397,0.00019343899,0.00008615023,0.000009525421,0.01010242,0.00042412928,0.0018968728,0.000025066,0.12168682,0.0011709277],"about_ca_topic_score_codex":0.77262765,"about_ca_topic_score_gemma":0.9957099,"teacher_disagreement_score":0.2230822,"about_ca_system_score_codex":0.00016907693,"about_ca_system_score_gemma":0.00067230186,"threshold_uncertainty_score":0.99992824},"labels":[],"label_agreement":null},{"id":"W4386083831","doi":"10.3201/eid2909.230517","title":"Rat Hepatitis E Virus in Norway Rats, Ontario, Canada, 2018–2021","year":2023,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Hepatitis Viruses Studies and Epidemiology","field":"Medicine","cited_by":14,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of Guelph; Public Health Agency of Canada; University of British Columbia; Health Canada","funders":"","keywords":"Virology; Virus; Genotype; Biology; Hepatitis virus; Hepatitis C virus; Hepatitis a virus; Hepatitis E virus; Medicine; Gene; Genetics","score_opus":0.015727526751029074,"score_gpt":0.2670198439789416,"score_spread":0.2512923172279125,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4386083831","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9901168,0.0007065207,0.00001473705,0.0013697962,0.0018402751,0.00027668482,0.00006777632,0.00013348224,0.0054739756],"genre_scores_gemma":[0.9858324,0.0068749688,0.00001205241,0.0025054447,0.00038060296,0.00013249984,0.00014077825,0.00003886267,0.004082412],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99823517,0.000102663085,0.00042360616,0.0003886148,0.00023008867,0.00061987893],"domain_scores_gemma":[0.9990655,0.00022589315,0.00008134585,0.00030113297,0.00006532364,0.00026077277],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00014286856,0.00023137519,0.00055003806,0.0002184678,0.00021928869,0.000013053119,0.00007047919,0.00007278823,0.0027770211],"category_scores_gemma":[0.000553316,0.00022316875,0.00012837922,0.0005987077,0.0000651839,0.00007081801,0.000101182464,0.00024382294,0.0003139728],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000022990302,0.00006488099,0.7575646,0.000038481627,0.00006960109,0.00047141546,0.00015355964,0.00028190197,0.00009089355,0.000039284492,0.24000393,0.0011984677],"study_design_scores_gemma":[0.0006226896,0.00011221291,0.86774343,0.00008602892,0.0000715665,0.000014096219,0.000047759997,0.00026816665,0.000036026755,0.00009241632,0.13069594,0.00020964268],"about_ca_topic_score_codex":0.9966074,"about_ca_topic_score_gemma":0.9996865,"teacher_disagreement_score":0.11017885,"about_ca_system_score_codex":0.0009921402,"about_ca_system_score_gemma":0.0009522911,"threshold_uncertainty_score":0.99813455},"labels":[],"label_agreement":null},{"id":"W4386084007","doi":"10.3201/eid2909.230559","title":"<i>Anaplasma bovis</i>–Like Infections in Humans, United States, 2015–2017","year":2023,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Vector-borne infectious diseases","field":"Immunology and Microbiology","cited_by":28,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Agriculture and Agri-Food Canada; University of Saskatchewan","funders":"Government of Canada; Centers for Disease Control and Prevention; Minnesota Department of Health; Mayo Clinic","keywords":"Anaplasma; Biology; Dermacentor variabilis; Tick-borne disease; Microbiology; Babesia bovis; Virology; Babesia; Ixodidae; Tick","score_opus":0.011420247057809705,"score_gpt":0.26883071804614495,"score_spread":0.25741047098833525,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4386084007","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98743767,0.0024910548,0.00007283922,0.00040441685,0.003300539,0.00060276786,0.00043107726,0.0032925927,0.0019670217],"genre_scores_gemma":[0.9916815,0.0014144381,0.000001939191,0.00065237086,0.00013245353,0.00033985544,0.00352538,0.00010382247,0.0021482145],"study_design_codex":"observational","study_design_gemma":"not_applicable","domain_scores_codex":[0.99669915,0.00048545955,0.0006414771,0.00080327195,0.00013186852,0.0012387886],"domain_scores_gemma":[0.9982125,0.00047032585,0.00022620057,0.0007373722,0.00018200956,0.00017155723],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00029540216,0.00053482776,0.00053947576,0.002051238,0.00082336937,0.00009721071,0.00032770075,0.00027766198,0.0013308377],"category_scores_gemma":[0.00051467575,0.0005755221,0.00030529968,0.00277023,0.00033337757,0.00035573656,0.00023288064,0.0005530499,0.0046254555],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007911624,0.001196125,0.72782266,0.00009396807,0.00045834307,0.0001340185,0.0005624059,0.009034068,0.001141465,0.0006656517,0.25805905,0.0007531447],"study_design_scores_gemma":[0.0052638454,0.00065390166,0.44940904,0.00018674097,0.00039961873,0.00014541157,0.00064958876,0.0003248115,0.0003086374,0.001941816,0.53929824,0.0014183465],"about_ca_topic_score_codex":0.003463221,"about_ca_topic_score_gemma":0.0030264377,"teacher_disagreement_score":0.28123918,"about_ca_system_score_codex":0.00030161891,"about_ca_system_score_gemma":0.00022698593,"threshold_uncertainty_score":0.9996696},"labels":[],"label_agreement":null},{"id":"W4386084520","doi":"10.3201/eid2909.230409","title":"Foodborne Botulism, Canada, 2006–20211","year":2023,"lang":"en","type":"review","venue":"Emerging infectious diseases","topic":"Botulinum Toxin and Related Neurological Disorders","field":"Medicine","cited_by":16,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"McGill University; Nunavik Regional Board of Health and Social Services; BC Centre for Disease Control; Health Canada","funders":"Health Canada; British Columbia Centre for Disease Control","keywords":"Botulism; Outbreak; Medicine; Serotype; Clostridium botulinum; Incidence (geometry); Population; Pediatrics; Environmental health; Virology; Biology; Microbiology; Toxin","score_opus":0.035113462041390923,"score_gpt":0.3196215316125812,"score_spread":0.2845080695711903,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4386084520","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00005879926,0.9918206,0.000005268947,0.00038915148,0.0015501594,0.0009656162,0.00029417232,0.0009090787,0.004007175],"genre_scores_gemma":[0.00019110639,0.9931766,0.0000025526654,0.00095427944,0.00049962086,0.00019509188,0.00046805205,0.00019502088,0.0043177153],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99714506,0.0001725391,0.0007355439,0.00076263316,0.00048962585,0.0006945966],"domain_scores_gemma":[0.9981978,0.00032068815,0.00028387914,0.000570132,0.00007321034,0.00055429194],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00007462396,0.0006766551,0.0019851604,0.0002952291,0.00022803222,0.00003591279,0.00020235927,0.00045297528,0.0005854395],"category_scores_gemma":[0.00044309828,0.0005108964,0.0009560445,0.0011298851,0.00010313608,0.00003861912,0.00013346033,0.0009963762,0.00045338392],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00003173388,0.0005851676,0.00064938277,0.031762596,0.002446535,0.0025586619,0.000016610855,0.00005464083,1.6940879e-7,0.00019102047,0.27636275,0.68534076],"study_design_scores_gemma":[0.00050120865,0.00017836165,0.0003511039,0.004985142,0.003810134,0.00014191335,0.00000861712,0.000013352955,6.9429525e-8,0.000095126525,0.98941493,0.00050005765],"about_ca_topic_score_codex":0.029675156,"about_ca_topic_score_gemma":0.027565364,"teacher_disagreement_score":0.71305215,"about_ca_system_score_codex":0.00026741892,"about_ca_system_score_gemma":0.0017668654,"threshold_uncertainty_score":0.9997343},"labels":[],"label_agreement":null},{"id":"W4386154163","doi":"10.3201/eid2910.230536","title":"Limited Outbreak of Highly Pathogenic Influenza A(H5N1) in Herring Gull Colony, Canada, 2022","year":2023,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Influenza Virus Research Studies","field":"Medicine","cited_by":11,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"Canadian Wildlife Health Cooperative","keywords":"Larus; Herring gull; Outbreak; Influenza A virus subtype H5N1; Seabird; Herring; Biology; Limiting; Zoology; Geography; Influenza A virus; Transmission (telecommunications); Fishery; Virology; Ecology; Virus; Fish <Actinopterygii>; Predation","score_opus":0.03150217748516273,"score_gpt":0.3280553718319755,"score_spread":0.29655319434681277,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4386154163","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99395275,0.0021800462,0.000002116014,0.0003659841,0.0002829186,0.0005333306,0.0001777748,0.0002937221,0.0022113314],"genre_scores_gemma":[0.9979883,0.00035347693,0.0000083482755,0.0007866507,0.0001326892,0.00016023322,0.000045612902,0.00005279059,0.0004719143],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99744123,0.00012737465,0.0005658515,0.00039753434,0.0007480378,0.0007199581],"domain_scores_gemma":[0.9985881,0.00031408767,0.00014201227,0.00043633446,0.00025866373,0.00026079186],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0002842952,0.0002636151,0.0005530757,0.0007035588,0.00018451487,0.000016406424,0.00014929325,0.00007310232,0.0001500367],"category_scores_gemma":[0.0017289714,0.0002614959,0.00015677491,0.0018222344,0.00012572456,0.00010481127,0.00027081335,0.00030757402,0.000050637555],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00022234944,0.0002122928,0.9769336,0.00043901382,0.00025914283,0.00041691266,0.0003956436,0.0022524942,0.0041292678,0.00006603263,0.012415422,0.0022578083],"study_design_scores_gemma":[0.0023805604,0.00021329758,0.9734724,0.00027669975,0.00012241204,0.000011029671,0.00041143855,0.00082540995,0.00067563297,0.00007790934,0.021252329,0.0002808584],"about_ca_topic_score_codex":0.2177762,"about_ca_topic_score_gemma":0.23759355,"teacher_disagreement_score":0.01981735,"about_ca_system_score_codex":0.0005665734,"about_ca_system_score_gemma":0.0010033059,"threshold_uncertainty_score":0.9999837},"labels":[],"label_agreement":null},{"id":"W4386271471","doi":"10.3201/eid2910.230055","title":"Emergence of SARS-CoV-2 Delta Variant and Effect of Nonpharmaceutical Interventions, British Columbia, Canada","year":2023,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"SARS-CoV-2 and COVID-19 Research","field":"Medicine","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"BC Centre for Disease Control; Public Health Agency of Canada; University of British Columbia","funders":"","keywords":"Coronavirus disease 2019 (COVID-19); Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2); Medicine; 2019-20 coronavirus outbreak; Psychological intervention; Demography; Delta; Dominance (genetics); Columbia university; Counterfactual thinking; Virology; Biology; Internal medicine; Outbreak","score_opus":0.0315261993428386,"score_gpt":0.3660746177602721,"score_spread":0.3345484184174335,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4386271471","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99683255,0.0016855961,0.000047098663,0.00005879939,0.0003071092,0.00042158616,0.00015111337,0.00010709294,0.00038906225],"genre_scores_gemma":[0.99879146,0.000071550676,0.0000048019565,0.0009273292,0.000063782216,0.00006369486,0.000016866925,0.00002656544,0.00003392779],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99835515,0.00013789802,0.0004173287,0.00030002353,0.000452402,0.00033717454],"domain_scores_gemma":[0.9991767,0.00025614203,0.00009806211,0.0002328637,0.00016149243,0.00007473927],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00030340583,0.00012537057,0.00042355192,0.00013966938,0.00011887312,0.000036233323,0.00010590562,0.000050708808,0.00009350611],"category_scores_gemma":[0.00080921926,0.00016385691,0.00020269114,0.00071781164,0.00016030327,0.000067913636,0.0001397608,0.0001593331,0.0000055507226],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008632882,0.00020042811,0.95475966,0.0024548655,0.00025692527,0.00039520577,0.00003290936,0.0000019349422,0.011610319,0.000008547843,0.019264668,0.010928232],"study_design_scores_gemma":[0.006949779,0.0024214017,0.8966111,0.0027374697,0.0014761868,0.00045348756,0.00023651305,0.0045831646,0.06612775,0.00021856125,0.017510956,0.0006736158],"about_ca_topic_score_codex":0.7085503,"about_ca_topic_score_gemma":0.6258027,"teacher_disagreement_score":0.082747556,"about_ca_system_score_codex":0.00005190535,"about_ca_system_score_gemma":0.00043729594,"threshold_uncertainty_score":0.66818905},"labels":[],"label_agreement":null},{"id":"W4386944842","doi":"10.3201/eid2910.230548","title":"Influenza A(H5N1) Virus Infections in 2 Free-Ranging Black Bears (<i>Ursus americanus</i>), Quebec, Canada","year":2023,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Influenza Virus Research Studies","field":"Medicine","cited_by":39,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Université de Montréal; University of Saskatchewan; Canadian Food Inspection Agency","funders":"Parks Canada; Oxford Nanopore Technologies","keywords":"Influenza A virus subtype H5N1; Ursus; Virology; Biology; Clade; Virus; Influenza A virus; Zoology; Gene; Phylogenetics; Genetics; Medicine; Population","score_opus":0.0254684250237529,"score_gpt":0.325782794719961,"score_spread":0.3003143696962081,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4386944842","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9876125,0.0026276137,0.000025533558,0.0025392564,0.00086357497,0.00076705584,0.00020996944,0.0010024555,0.0043520406],"genre_scores_gemma":[0.99116194,0.0014096347,0.000016896329,0.0035395655,0.0005517828,0.00037345197,0.00008526202,0.00013007983,0.0027313668],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99659723,0.00016121987,0.00056892587,0.00056948117,0.00086877996,0.0012343884],"domain_scores_gemma":[0.9980049,0.00042939777,0.00013265327,0.000711814,0.00025250702,0.00046873945],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00023858651,0.00041109274,0.000611272,0.001055791,0.00046843427,0.000073464726,0.00021675858,0.0000912916,0.00031533375],"category_scores_gemma":[0.0023017107,0.0004320351,0.00021417391,0.003179311,0.0004025756,0.000293931,0.00033224802,0.000580194,0.00025810098],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014986654,0.00034709214,0.7711668,0.00038298007,0.00045499468,0.00076343725,0.00087544887,0.010975839,0.0006168868,0.00013401233,0.20848757,0.0056450535],"study_design_scores_gemma":[0.0052441717,0.00024767194,0.7038048,0.0004647884,0.0002845918,0.00003606365,0.0015592915,0.0015302522,0.00035809702,0.00033268693,0.28523394,0.00090365036],"about_ca_topic_score_codex":0.86598545,"about_ca_topic_score_gemma":0.90264904,"teacher_disagreement_score":0.07674637,"about_ca_system_score_codex":0.0013177755,"about_ca_system_score_gemma":0.0015970841,"threshold_uncertainty_score":0.99981314},"labels":[],"label_agreement":null},{"id":"W4386945049","doi":"10.3201/eid2910.221899","title":"One Health Approach to Globalizing, Accelerating, and Focusing Amphibian and Reptile Disease Research—Reflections and Opinions from the First Global Amphibian and Reptile Disease Conference","year":2023,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Amphibian and Reptile Biology","field":"Environmental Science","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"U.S. Geological Survey; Division of Environmental Biology; Tennessee Tech University; Nature Conservancy; Environment and Climate Change Canada; Division of Integrative Organismal Systems; Institute of Agriculture, University of Tennessee; Tennessee Wildlife Resources Agency; National Science Foundation","keywords":"Amphibian; Biodiversity; Disease; Biology; Ecology; Environmental resource management; Medicine","score_opus":0.07403639869821575,"score_gpt":0.34222747832048034,"score_spread":0.26819107962226457,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4386945049","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98211145,0.0019057998,0.00025082804,0.010486689,0.00021826357,0.0011773212,0.0008244251,0.00039956518,0.002625671],"genre_scores_gemma":[0.9970128,0.0009917503,0.00023994326,0.0010656889,0.00024130805,0.00014434471,0.0001437648,0.000030035926,0.00013034155],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99704355,0.00033097697,0.00034752797,0.0011543947,0.0003894104,0.00073412864],"domain_scores_gemma":[0.9977318,0.00021731496,0.00012267352,0.0005194369,0.00003396311,0.00137482],"candidate_categories":["metaepi_narrow","sts"],"consensus_categories":[],"category_scores_codex":[0.0004139074,0.00030809556,0.00031174274,0.000097563985,0.0026690662,0.00039081235,0.00019045423,0.00007555947,0.00010738462],"category_scores_gemma":[0.0004901176,0.0002683785,0.000061278726,0.00077956903,0.0011456615,0.00027575114,0.0008750228,0.00021555577,0.000031210326],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000074954514,0.00022033618,0.97111285,0.00007992179,0.00004742446,0.000010694155,0.0013569328,0.000203828,0.00006425268,0.0013230019,0.016585639,0.0089201685],"study_design_scores_gemma":[0.00046768528,0.00013066785,0.9836509,0.0001586133,0.00005531678,0.000010908546,0.0008658038,0.0015438321,0.0000019492281,0.002551015,0.010227739,0.00033552284],"about_ca_topic_score_codex":0.0043088924,"about_ca_topic_score_gemma":0.0050982987,"teacher_disagreement_score":0.014901386,"about_ca_system_score_codex":0.00021460475,"about_ca_system_score_gemma":0.00011401309,"threshold_uncertainty_score":0.9999768},"labels":[],"label_agreement":null},{"id":"W4386945348","doi":"10.3201/eid2910.230011","title":"Comprehensive Case–Control Study of Protective and Risk Factors for Buruli Ulcer, Southeastern Australia","year":2023,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Mycobacterium research and diagnosis","field":"Medicine","cited_by":14,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"","keywords":"Hygiene; Odds ratio; Conditional logistic regression; Odds; Buruli ulcer; Environmental health; Logistic regression; Medicine; Vaccination; Case-control study; Infection control; Demography; Veterinary medicine; Immunology; Surgery; Internal medicine; Pathology; Disease","score_opus":0.038419180024078785,"score_gpt":0.3391068750091703,"score_spread":0.3006876949850915,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4386945348","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99556977,0.0001083584,0.00010859245,0.00003535775,0.0001321187,0.0029002072,0.0009417024,0.00018722311,0.000016698968],"genre_scores_gemma":[0.99917704,0.00004553573,0.0000045766687,0.000011555151,0.00012682735,0.00050918985,0.000022545653,0.000030178604,0.00007253773],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99868965,0.00015085787,0.00024466455,0.0003303962,0.00023585129,0.000348586],"domain_scores_gemma":[0.99842507,0.00068788085,0.00012189576,0.00022624501,0.00024511106,0.00029380145],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00010436467,0.00019663446,0.00041109038,0.00028434314,0.00022191477,0.00002799333,0.00004146656,0.00004809781,0.0000901639],"category_scores_gemma":[0.00075297256,0.00016225442,0.00013528984,0.00031628268,0.00007453412,0.000075576434,0.000047813293,0.00013675026,0.000012962355],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00040576022,0.00060658535,0.99428064,0.00036606967,0.0007249862,0.00021035083,0.0016787754,0.00011338855,0.00020877719,0.0000038123903,0.00027351157,0.0011273444],"study_design_scores_gemma":[0.005240224,0.0027674467,0.98371917,0.000059917715,0.00079432136,0.000048846687,0.0064151227,0.0004958478,0.0001113782,0.000095151314,0.00009750549,0.0001550715],"about_ca_topic_score_codex":0.0036294989,"about_ca_topic_score_gemma":0.00024924558,"teacher_disagreement_score":0.010561471,"about_ca_system_score_codex":0.00002653522,"about_ca_system_score_gemma":0.000041350562,"threshold_uncertainty_score":0.6616543},"labels":[],"label_agreement":null},{"id":"W4386945548","doi":"10.3201/eid2910.230809","title":"<i>Plasmodium knowlesi</i> Infection in Traveler Returning to Canada from the Philippines, 2023","year":2023,"lang":"en","type":"review","venue":"Emerging infectious diseases","topic":"Malaria Research and Control","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"BC Centre for Disease Control; University of British Columbia","funders":"","keywords":"Plasmodium knowlesi; Atovaquone; Malaria; Proguanil; Epidemiology; Medicine; Plasmodium (life cycle); Virology; Plasmodium falciparum; Immunology; Plasmodium vivax; Internal medicine; Parasite hosting","score_opus":0.030383051776729432,"score_gpt":0.3197096354409375,"score_spread":0.28932658366420805,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4386945548","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00071536785,0.99201363,0.000039334347,0.0013740256,0.001376956,0.002513427,0.0004962084,0.00027037822,0.0012006449],"genre_scores_gemma":[0.0019029026,0.9918547,0.0000023509351,0.0006241845,0.0017384273,0.0010960107,0.0006569513,0.00014007035,0.0019843492],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99676496,0.00039833036,0.000727874,0.00069134304,0.00067832775,0.00073917594],"domain_scores_gemma":[0.99761605,0.0009044926,0.00019821452,0.0006547756,0.00013563402,0.00049084163],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00031347442,0.00054545724,0.001499691,0.0004162109,0.00026520577,0.00009267737,0.0002472393,0.00019943759,0.00042802846],"category_scores_gemma":[0.0017421892,0.00038874595,0.00046030615,0.0016967453,0.00004022736,0.00005196092,0.00015812647,0.00096808403,0.00023702956],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013245262,0.00030696805,0.012879127,0.011920744,0.0014890041,0.00069287186,0.00013241488,0.00015615551,0.0000021879948,0.00010165123,0.106552415,0.865634],"study_design_scores_gemma":[0.0007533979,0.00009140475,0.012855594,0.010605355,0.0010230233,0.000024198496,0.000021682892,0.00007709457,3.3069392e-7,0.000044713015,0.9740969,0.0004063044],"about_ca_topic_score_codex":0.6567724,"about_ca_topic_score_gemma":0.81147,"teacher_disagreement_score":0.8675445,"about_ca_system_score_codex":0.00092263584,"about_ca_system_score_gemma":0.003445482,"threshold_uncertainty_score":0.9998565},"labels":[],"label_agreement":null},{"id":"W4388869803","doi":"10.3201/eid2912.230587","title":"Crimean-Congo Hemorrhagic Fever Virus Seropositivity among Dromedary Camels, Algeria, 2020–2021","year":2023,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Viral Infections and Vectors","field":"Medicine","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canarie","funders":"Generalitat de Catalunya","keywords":"Crimean–Congo hemorrhagic fever; Virology; Serology; Virus; Antibody; Biology; Veterinary medicine; Medicine; Immunology","score_opus":0.008580778661837613,"score_gpt":0.2722789995543093,"score_spread":0.2636982208924717,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4388869803","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99107146,0.00043153155,0.00012382143,0.00038123943,0.0015601309,0.00046800202,0.000091811235,0.0012534787,0.004618537],"genre_scores_gemma":[0.9948644,0.0003078786,0.000013652731,0.00041507118,0.000877064,0.00011210378,0.0002491066,0.000091649345,0.0030690662],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9978464,0.00013390227,0.00038255905,0.0006075964,0.00038261412,0.000646918],"domain_scores_gemma":[0.9985917,0.000115406096,0.00012407578,0.00054634525,0.00015014167,0.00047232633],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00017871484,0.0003854932,0.00052225863,0.0004233875,0.0005300471,0.00009603704,0.000096227865,0.00013820607,0.0024804128],"category_scores_gemma":[0.0002730287,0.000372452,0.0004041305,0.0015473082,0.00018738626,0.0003564043,0.00014047009,0.00035632236,0.0011436128],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006601995,0.00081170327,0.9394248,0.00024363247,0.0004544702,0.0010235431,0.00025895762,0.000337191,0.009512456,0.000088541776,0.03865146,0.009127229],"study_design_scores_gemma":[0.0014341805,0.00037003812,0.9864076,0.00016280393,0.00056225865,0.00017423044,0.0001819726,0.001878396,0.0020166342,0.00026187673,0.005979656,0.00057038467],"about_ca_topic_score_codex":0.0024249519,"about_ca_topic_score_gemma":0.00028546207,"teacher_disagreement_score":0.046982773,"about_ca_system_score_codex":0.00021402944,"about_ca_system_score_gemma":0.00018226424,"threshold_uncertainty_score":0.99987274},"labels":[],"label_agreement":null},{"id":"W4388870585","doi":"10.3201/eid2912.230373","title":"Naturally Acquired Rabies in White-Eared Opossum, Brazil","year":2023,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Rabies epidemiology and control","field":"Immunology and Microbiology","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"WiLAN (Canada)","funders":"Conselho Nacional de Desenvolvimento Científico e Tecnológico; Fundação de Amparo à Pesquisa do Estado de São Paulo","keywords":"Rabies; Opossum; Geography; Wildlife; Disease reservoir; Biology; Zoology; Virology; Ecology","score_opus":0.007316330646161793,"score_gpt":0.2654846462166643,"score_spread":0.2581683155705025,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4388870585","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98653275,0.0048216386,0.000030334904,0.0022449142,0.0021297846,0.00029289516,0.000051489755,0.0010885167,0.002807678],"genre_scores_gemma":[0.9935145,0.00026850638,0.0000032925325,0.0008694339,0.00008663216,0.00013048458,0.0002625856,0.00002840804,0.0048361565],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99794483,0.00047418548,0.0004136186,0.00044155488,0.000042864438,0.000682933],"domain_scores_gemma":[0.9989318,0.000515924,0.000117643096,0.0003328795,0.000057344092,0.000044362103],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00031674354,0.00025882936,0.0004632134,0.00039174245,0.00035121033,0.00002119624,0.00024725043,0.00027905998,0.0009776046],"category_scores_gemma":[0.0009606648,0.00024135766,0.00019288747,0.00060661754,0.00027404894,0.0001823429,0.00012039279,0.00025913524,0.0017775754],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00022685526,0.00014878785,0.9233972,0.00003946302,0.00028132548,0.000058363174,0.00053348986,0.0013424827,0.008043519,0.0011429552,0.060363423,0.004422165],"study_design_scores_gemma":[0.0030441673,0.00013896766,0.96604466,0.000067231325,0.00008324264,0.000038119615,0.00038729873,0.00014499236,0.0003918666,0.0029817855,0.026216317,0.0004613659],"about_ca_topic_score_codex":0.000118928656,"about_ca_topic_score_gemma":0.00020901744,"teacher_disagreement_score":0.042647474,"about_ca_system_score_codex":0.000057514408,"about_ca_system_score_gemma":0.00007261048,"threshold_uncertainty_score":0.9999356},"labels":[],"label_agreement":null},{"id":"W4389152502","doi":"10.3201/eid3001.231164","title":"Clade I–Associated Mpox Cases Associated with Sexual Contact, the Democratic Republic of the Congo","year":2023,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Poxvirus research and outbreaks","field":"Immunology and Microbiology","cited_by":182,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Canadian Institutes of Health Research; Agence Française de Développement; Institut de Recherche pour le Développement; U.S. Department of Agriculture; International Development Research Centre; U.S. Department of Defense","keywords":"Clade; Sexual contact; Monkeypox; Virology; Biology; Transmission (telecommunications); Sexual transmission; Contact tracing; Human immunodeficiency virus (HIV); Medicine; Genetics; Coronavirus disease 2019 (COVID-19); Phylogenetics; Gene; Infectious disease (medical specialty); Disease; Pathology","score_opus":0.01564003322648532,"score_gpt":0.25994831739282087,"score_spread":0.24430828416633554,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4389152502","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9961431,0.00084352476,0.000003453402,0.0006493696,0.0003934999,0.0003925596,0.00030395467,0.00037573063,0.0008948053],"genre_scores_gemma":[0.9947216,0.00004633181,1.14371865e-7,0.00027307434,0.000029887044,0.00007559447,0.00019219007,0.000027703782,0.0046335394],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9978672,0.00080206245,0.0002953767,0.00026789473,0.00015846253,0.0006089556],"domain_scores_gemma":[0.99766856,0.0013798747,0.00026019313,0.00042667487,0.00021102857,0.000053681193],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003210039,0.00020698548,0.00031813871,0.00013089657,0.00079857936,0.000039483886,0.00036031113,0.00015090282,0.00028277974],"category_scores_gemma":[0.004216186,0.00011421936,0.000138867,0.0009979228,0.0004421884,0.0001040321,0.00017293391,0.0004221454,0.00009421444],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00019792312,0.0005488509,0.8665075,0.00004465206,0.0026576186,0.00006671926,0.0008215587,0.00016485117,0.022890955,0.00049552665,0.1039506,0.0016532544],"study_design_scores_gemma":[0.002050762,0.00054497516,0.9900101,0.00010832411,0.00028099027,0.000053205564,0.0005230508,0.00006480589,0.0021141316,0.00028262366,0.0037145233,0.00025250547],"about_ca_topic_score_codex":0.00096739165,"about_ca_topic_score_gemma":0.0015736563,"teacher_disagreement_score":0.12350261,"about_ca_system_score_codex":0.00009469004,"about_ca_system_score_gemma":0.00031312005,"threshold_uncertainty_score":0.6142107},"labels":[],"label_agreement":null},{"id":"W4390022388","doi":"10.3201/eid3001.230427","title":"Costs of Digital Adherence Technologies for Tuberculosis Treatment Support, 2018–2021","year":2023,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Tuberculosis Research and Epidemiology","field":"Medicine","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University Health Centre","funders":"","keywords":"Tanzania; Tuberculosis; Drug resistant tuberculosis; Medicine; Yield (engineering); Drug prices; Business; Mycobacterium tuberculosis; Socioeconomics; Economics; Public economics; Pathology","score_opus":0.030087712884858543,"score_gpt":0.34406707552272875,"score_spread":0.3139793626378702,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4390022388","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98922104,0.00094724406,0.0001695015,0.004077067,0.0002947073,0.0010486864,0.00066866283,0.0009958764,0.0025772415],"genre_scores_gemma":[0.99656487,0.0016937463,0.000030460888,0.000057232446,0.00009716016,0.00046425982,0.00038313266,0.000027105194,0.00068201683],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99862367,0.000031010844,0.0003177064,0.00034736353,0.00017649052,0.0005037389],"domain_scores_gemma":[0.99877614,0.0004910291,0.0000828573,0.00036512545,0.00012322655,0.0001616485],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00010060447,0.00018907456,0.0004587185,0.0003508809,0.00010713377,0.000019272793,0.000088621215,0.0000964596,0.00016720573],"category_scores_gemma":[0.0019756316,0.00014935268,0.00030587378,0.00052522146,0.00017364738,0.0001149381,0.00007641617,0.00007646674,0.00015977926],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00021261584,0.0006020478,0.77967215,0.00020535753,0.00055363734,0.00005157285,0.00007394407,0.00008069852,0.00095078495,0.0003815316,0.05580967,0.161406],"study_design_scores_gemma":[0.021378815,0.03979922,0.657153,0.0012645805,0.002973494,0.00036618227,0.0056246133,0.008099935,0.022188734,0.014342355,0.22438544,0.002423596],"about_ca_topic_score_codex":0.00015349727,"about_ca_topic_score_gemma":0.00003362749,"teacher_disagreement_score":0.16857576,"about_ca_system_score_codex":0.00018349168,"about_ca_system_score_gemma":0.0001363381,"threshold_uncertainty_score":0.6090426},"labels":[],"label_agreement":null},{"id":"W4391192524","doi":"10.3201/eid3002.230963","title":"<i>Salmonella</i> Vitkin Outbreak Associated with Bearded Dragons, Canada and United States, 2020–2022","year":2024,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Salmonella and Campylobacter epidemiology","field":"Agricultural and Biological Sciences","cited_by":16,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Public Health Agency of Canada; Ministry of Health; Ministry of Agriculture, Food and Rural Affairs; Public Health Ontario","funders":"","keywords":"Outbreak; Multilocus sequence typing; Serotype; Salmonella enterica; Whole genome sequencing; Salmonella; Biology; Typing; Veterinary medicine; Genome; Medicine; Virology; Genotype; Genetics","score_opus":0.005112594398040225,"score_gpt":0.19650729374485904,"score_spread":0.1913946993468188,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4391192524","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9941153,0.0027908194,0.0000031492646,0.0014212496,0.00035863736,0.0001473609,0.00042969995,0.00037652114,0.0003572883],"genre_scores_gemma":[0.99629074,0.00050069904,0.0000014039427,0.0012861721,0.0001826481,0.00002929941,0.001179218,0.000004841249,0.00052495877],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99847984,0.00020636637,0.00022837406,0.00045620036,0.00020667685,0.00042254725],"domain_scores_gemma":[0.9988355,0.00072964263,0.00007015004,0.000067596426,0.00006226636,0.00023483248],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014574772,0.00024148838,0.0002692295,0.000030257295,0.0002665908,0.0001059814,0.0001112339,0.00007415511,0.00034621274],"category_scores_gemma":[0.0001500123,0.00010421051,0.000064007174,0.00075447554,0.00008519451,0.000082834355,0.00006895494,0.00017470292,0.0000075702237],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000059942493,0.00016858308,0.89816856,0.00004711773,0.00037016053,0.0003758027,0.00012556047,0.00034626556,0.0022123419,0.0001716011,0.081085905,0.016868137],"study_design_scores_gemma":[0.000331248,0.0003937222,0.7877091,0.00015374173,0.00022785571,0.000080949074,0.00040346562,0.0013658493,0.00010438775,0.00077474915,0.20776989,0.0006850273],"about_ca_topic_score_codex":0.31926164,"about_ca_topic_score_gemma":0.49204355,"teacher_disagreement_score":0.17278193,"about_ca_system_score_codex":0.00010990552,"about_ca_system_score_gemma":0.00007638289,"threshold_uncertainty_score":0.68527144},"labels":[],"label_agreement":null},{"id":"W4393975241","doi":"10.3201/eid3005.221258","title":"Case Series of Jamestown Canyon Virus Infections with Neurologic Outcomes, Canada, 2011–2016","year":2024,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Viral Infections and Vectors","field":"Medicine","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Epidemiology; Virology; Medicine; Nova scotia; Encephalitis; Arbovirus; Meningoencephalitis; Meningitis; Disease; Asymptomatic; Pediatrics; Geography; Virus; Pathology","score_opus":0.009958852012927854,"score_gpt":0.25146546750389387,"score_spread":0.24150661549096603,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4393975241","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9934597,0.0009895412,0.00014123076,0.00081467855,0.0011580053,0.0003406105,0.00019858773,0.00052424404,0.0023733915],"genre_scores_gemma":[0.9976045,0.00011889517,0.000014501651,0.0003068515,0.00015772012,0.00007655472,0.0000295834,0.000049393027,0.0016420187],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9987202,0.000057264435,0.00031582295,0.0003529353,0.00022944868,0.00032430878],"domain_scores_gemma":[0.9990989,0.00010626983,0.000079629404,0.00033627378,0.00013611457,0.00024279083],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00006101877,0.00028135994,0.0003898102,0.00032567678,0.00029580196,0.000042101932,0.00004264841,0.00006630603,0.0007491968],"category_scores_gemma":[0.00009857784,0.00020288152,0.00016676818,0.0005101066,0.00014830445,0.00022141896,0.000037308004,0.0002652676,0.000024446113],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008518381,0.0005476789,0.9662071,0.00047754167,0.00056294526,0.00774508,0.00011436835,0.0009665233,0.00033644188,0.0005267643,0.020364784,0.0020656134],"study_design_scores_gemma":[0.003919013,0.009399038,0.6825391,0.0007772079,0.0053028343,0.09902222,0.00051731465,0.001668656,0.0015039521,0.00046145896,0.19284701,0.002042206],"about_ca_topic_score_codex":0.47799674,"about_ca_topic_score_gemma":0.45673445,"teacher_disagreement_score":0.28366798,"about_ca_system_score_codex":0.000204133,"about_ca_system_score_gemma":0.0010632093,"threshold_uncertainty_score":0.82732683},"labels":[],"label_agreement":null},{"id":"W4395448924","doi":"10.3201/eid3005.231248","title":"Protective Efficacy of Lyophilized Vesicular Stomatitis Virus–Based Vaccines in Animal Model","year":2024,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Viral Infections and Outbreaks Research","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba; Public Health Agency of Canada","funders":"","keywords":"Vesicular stomatitis virus; Vesicular Stomatitis; Virology; Vesicular stomatitis Indiana virus; Stomatitis; Virus; Biology; Microbiology; Medicine","score_opus":0.015135124867177756,"score_gpt":0.3256585152302267,"score_spread":0.31052339036304893,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4395448924","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9923248,0.0015549274,0.0033281408,0.0003355871,0.00011860158,0.00089875975,0.000052794257,0.00038595864,0.0010004088],"genre_scores_gemma":[0.999347,0.000058518934,0.00006393337,0.00005765773,0.00012543738,0.00020069309,0.000025026664,0.000045282828,0.000076458695],"study_design_codex":"bench_or_experimental","study_design_gemma":"simulation_or_modeling","domain_scores_codex":[0.99860305,0.00008476264,0.00033705236,0.00035866353,0.00031493488,0.00030154546],"domain_scores_gemma":[0.9993182,0.00012586039,0.000045482066,0.00022957052,0.00013676846,0.00014414548],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014943161,0.00019892225,0.00036743074,0.00072209165,0.00009801466,0.000043240525,0.00005865422,0.00007626582,0.0002471287],"category_scores_gemma":[0.0002827363,0.00017362832,0.0002569049,0.0009942702,0.00007402245,0.00016573428,0.000044636647,0.0002588848,0.000031161573],"study_design_candidate":"simulation_or_modeling","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.004549751,0.012073206,0.2990666,0.010337189,0.0019401787,0.0018608358,0.0020254774,0.15841413,0.4261615,0.0050660027,0.0042528827,0.074252255],"study_design_scores_gemma":[0.005791184,0.0014900377,0.25137943,0.0016513501,0.00040200943,0.00005833047,0.000058991172,0.71690756,0.019691985,0.0015352585,0.0005597161,0.000474127],"about_ca_topic_score_codex":0.00069498067,"about_ca_topic_score_gemma":0.000101095815,"teacher_disagreement_score":0.55849344,"about_ca_system_score_codex":0.00017463444,"about_ca_system_score_gemma":0.00033513925,"threshold_uncertainty_score":0.70803577},"labels":[],"label_agreement":null},{"id":"W4395448976","doi":"10.3201/eid3005.231739","title":"SARS-CoV-2 IgG Levels as Predictors of XBB Variant Neutralization, Israel, 2022 and 2023","year":2024,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"SARS-CoV-2 and COVID-19 Research","field":"Medicine","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hospital for Sick Children","funders":"","keywords":"Neutralization; Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2); Virology; Coronavirus disease 2019 (COVID-19); 2019-20 coronavirus outbreak; Medicine; Biology; Internal medicine; Outbreak; Virus; Infectious disease (medical specialty)","score_opus":0.024993937022332952,"score_gpt":0.3399837529893623,"score_spread":0.31498981596702935,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4395448976","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98637694,0.00611915,0.00046849088,0.0003538405,0.00081345724,0.00046151102,0.000121607794,0.00040804758,0.0048769247],"genre_scores_gemma":[0.99437493,0.00010888013,0.000008023045,0.004744721,0.00042082925,0.00006780577,0.000021144506,0.00005991735,0.00019374849],"study_design_codex":"observational","study_design_gemma":"not_applicable","domain_scores_codex":[0.9981735,0.00008611373,0.00037532096,0.00048452948,0.0005070186,0.00037355904],"domain_scores_gemma":[0.99916124,0.00017777865,0.00006253257,0.0003416658,0.0001754555,0.00008134206],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00020885687,0.00024072429,0.00034772177,0.00048952893,0.00014499671,0.0000936322,0.00010533769,0.000098231634,0.00008653326],"category_scores_gemma":[0.00044345186,0.00021810658,0.00016403916,0.0009437003,0.00017425054,0.00021763708,0.000107222935,0.00022148971,0.000081841106],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00026622895,0.0008605382,0.7653641,0.0030439363,0.0012832461,0.0011490511,0.0012633813,0.000026222033,0.18371741,0.0069902022,0.030378172,0.0056575257],"study_design_scores_gemma":[0.005667543,0.0026352725,0.22131789,0.0023532254,0.002386527,0.0013226088,0.0007013493,0.008781263,0.2646311,0.007430511,0.4812464,0.0015263002],"about_ca_topic_score_codex":0.0010192993,"about_ca_topic_score_gemma":0.00005627055,"teacher_disagreement_score":0.5440462,"about_ca_system_score_codex":0.000097897355,"about_ca_system_score_gemma":0.0004608422,"threshold_uncertainty_score":0.8894128},"labels":[],"label_agreement":null},{"id":"W4395449022","doi":"10.3201/eid3005.231558","title":"Detection of OXA-181 Carbapenemase in <i>Shigella flexneri</i>","year":2024,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Antibiotic Resistance in Bacteria","field":"Biochemistry, Genetics and Molecular Biology","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hospital for Sick Children; University of Toronto; Western University","funders":"","keywords":"Shigella flexneri; Shigella; Microbiology; Shigellosis; Biology; Virology; Medicine; Escherichia coli; Bacteria; Salmonella; Genetics","score_opus":0.0043159166628980086,"score_gpt":0.2441727476996754,"score_spread":0.23985683103677738,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4395449022","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9921696,0.004684499,0.00070181827,0.000023252236,0.00061860826,0.00012251803,0.00002349646,0.000060167604,0.0015960004],"genre_scores_gemma":[0.9989676,0.00043039388,0.00001907171,0.000039235285,0.00022069579,0.000011833213,0.000037167334,0.00003021935,0.00024381082],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9991097,0.000051605166,0.00023137363,0.00031383248,0.000102485974,0.00019103206],"domain_scores_gemma":[0.9995964,0.000019405024,0.000048274833,0.00024254099,0.00003664319,0.00005673412],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00007660486,0.0001411047,0.00014325563,0.00010895712,0.00003774254,0.000030981984,0.0000843708,0.0000825242,0.000035586363],"category_scores_gemma":[0.00009026098,0.00014306982,0.00011143471,0.00023429525,0.00007036409,0.000007888036,0.00005169926,0.0000684136,0.000012402795],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007100154,0.00011559461,0.12826,0.00029190394,0.000072307834,0.000027174321,0.000050675204,0.0004159986,0.8644907,0.00011097943,0.00041568824,0.0056780074],"study_design_scores_gemma":[0.0011520503,0.00060133,0.190051,0.00055634294,0.00019081614,0.000058960602,0.00022640702,0.00091304234,0.73814714,0.0006913334,0.066465676,0.00094588695],"about_ca_topic_score_codex":0.00009141705,"about_ca_topic_score_gemma":0.00020535522,"teacher_disagreement_score":0.1263435,"about_ca_system_score_codex":0.000030576182,"about_ca_system_score_gemma":0.00007237155,"threshold_uncertainty_score":0.58342177},"labels":[],"label_agreement":null},{"id":"W4395449025","doi":"10.3201/eid3005.230482","title":"SARS-CoV-2 Transmission in Alberta, British Columbia, and Ontario, Canada, January 2020–January 2022","year":2024,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"COVID-19 epidemiological studies","field":"Mathematics","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2); Coronavirus disease 2019 (COVID-19); 2019-20 coronavirus outbreak; Transmission (telecommunications); Virology; Betacoronavirus; Pandemic; Geography; Coronavirus Infections; Medicine; Outbreak; Infectious disease (medical specialty)","score_opus":0.030557456883482645,"score_gpt":0.31407609671770426,"score_spread":0.2835186398342216,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4395449025","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9871913,0.0075495928,0.00013159799,0.0012853849,0.0004532609,0.0004495797,0.00006465401,0.00022840827,0.0026461917],"genre_scores_gemma":[0.9945271,0.00064859574,0.00006856606,0.0012175327,0.00012647649,0.00014205353,0.000023944154,0.000038274793,0.0032074791],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9979556,0.00017121545,0.00049725233,0.00062816427,0.00027492509,0.0004728438],"domain_scores_gemma":[0.997399,0.0021586793,0.00006316045,0.0002028054,0.000032615782,0.00014374994],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00025295326,0.00023251583,0.00051187427,0.00005962846,0.00029701556,0.00019034713,0.00012394563,0.00009430481,0.00049024913],"category_scores_gemma":[0.0010572047,0.00029710378,0.00013931806,0.00035155274,0.00009062021,0.0001564903,0.00013446914,0.0003673621,0.0000066126704],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000111759855,0.00017598782,0.5029229,0.00063193997,0.00013597138,0.0005930975,0.00042933688,0.000023606586,0.00005604301,0.00012289696,0.48478198,0.010115071],"study_design_scores_gemma":[0.00080800254,0.00015428793,0.6981226,0.0013148014,0.0003256945,0.00010596003,0.00012359703,0.0012347125,0.000026120777,0.07182558,0.22502528,0.00093335984],"about_ca_topic_score_codex":0.99786365,"about_ca_topic_score_gemma":0.9998164,"teacher_disagreement_score":0.2597567,"about_ca_system_score_codex":0.0007446702,"about_ca_system_score_gemma":0.0005533438,"threshold_uncertainty_score":0.9999481},"labels":[],"label_agreement":null},{"id":"W4395475043","doi":"10.3201/eid3005.231775","title":"Detection of Recombinant African Swine Fever Virus Strains of p72 Genotypes I and II in Domestic Pigs, Vietnam, 2023","year":2024,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Animal Disease Management and Epidemiology","field":"Agricultural and Biological Sciences","cited_by":48,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canadian Science Centre for Human and Animal Health","funders":"Animal and Plant Quarantine Agency; Ministry of Agriculture, Food and Rural Affairs","keywords":"Genotype; Virology; Biology; African swine fever virus; Recombinant DNA; Virus; Veterinary medicine; Gene; Medicine; Genetics","score_opus":0.012792956315287764,"score_gpt":0.24450105630281754,"score_spread":0.23170809998752978,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4395475043","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9964621,0.0022508996,0.000013445759,0.0002908609,0.00023706027,0.00014930528,0.000048627226,0.00007215922,0.00047551974],"genre_scores_gemma":[0.999027,0.00069197983,0.0000035006112,0.000037142287,0.000075341755,0.00001771893,0.000024013985,0.0000017644915,0.00012150521],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9991242,0.00008056063,0.0002678374,0.0002461181,0.0000899485,0.00019131611],"domain_scores_gemma":[0.99965864,0.0001346667,0.00007284001,0.000040322353,0.00002468704,0.000068846915],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014685892,0.00012183022,0.00023029034,0.00007389017,0.00009590136,0.000013449407,0.00006896118,0.00004465904,0.00024722164],"category_scores_gemma":[0.00012478099,0.000058568818,0.00009336202,0.0005040059,0.00008596743,0.000094678035,0.000086595275,0.00006677634,0.0000058013115],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000206572,0.0011770793,0.52490133,0.0008461259,0.00030272588,0.00007690772,0.000478568,0.0003909965,0.21739359,0.0029842907,0.0019068038,0.24933504],"study_design_scores_gemma":[0.000120957244,0.0004315028,0.99309814,0.00008369235,0.00008007626,0.0000028122024,0.00013173466,0.00082738034,0.000068841924,0.0019094566,0.0031082404,0.00013715868],"about_ca_topic_score_codex":0.00141969,"about_ca_topic_score_gemma":0.0019741962,"teacher_disagreement_score":0.46819684,"about_ca_system_score_codex":0.000022979293,"about_ca_system_score_gemma":0.000008243715,"threshold_uncertainty_score":0.27069035},"labels":[],"label_agreement":null},{"id":"W4398167533","doi":"10.3201/eid3006.231033","title":"Outbreak of Highly Pathogenic Avian Influenza A(H5N1) Virus in Seals, St. Lawrence Estuary, Quebec, Canada1","year":2024,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Influenza Virus Research Studies","field":"Medicine","cited_by":55,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"Canadian Wildlife Health Cooperative; Oxford Nanopore Technologies","keywords":"Influenza A virus subtype H5N1; Outbreak; Virology; Highly pathogenic; Influenza A virus; Biology; Virus; Estuary; Pandemic; Avian influenza virus; Geography; Zoology; Coronavirus disease 2019 (COVID-19); Fishery; Medicine; Infectious disease (medical specialty)","score_opus":0.02611653810866386,"score_gpt":0.333312808827103,"score_spread":0.30719627071843914,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4398167533","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9717815,0.022759795,0.00002188192,0.0005281602,0.00045141796,0.00068293745,0.00045399155,0.00044484079,0.0028755066],"genre_scores_gemma":[0.9974047,0.00086331664,0.000020357,0.00071726495,0.0002342143,0.00015524909,0.00004424015,0.00006890631,0.0004917862],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9970853,0.00015233437,0.00065725105,0.0005857206,0.0007801261,0.0007392789],"domain_scores_gemma":[0.9985024,0.00028529635,0.00009583307,0.00051890395,0.00023304617,0.00036455193],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00029032712,0.00036977328,0.00062656566,0.0007596965,0.00016453738,0.00006840261,0.00018678924,0.00010682517,0.00028631196],"category_scores_gemma":[0.0007418591,0.0003375358,0.00025011905,0.0011707264,0.000277332,0.00027645743,0.0002010208,0.00044950278,0.00008670459],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00037908464,0.00070275576,0.93989515,0.0028339976,0.00089128985,0.0018073707,0.0020460403,0.0006198565,0.014332675,0.0021074077,0.01349748,0.020886863],"study_design_scores_gemma":[0.0023886946,0.0005182445,0.90604687,0.0018877441,0.0004880951,0.000056201614,0.00040547436,0.00081430865,0.0021030176,0.00067011797,0.083886996,0.0007342392],"about_ca_topic_score_codex":0.14548004,"about_ca_topic_score_gemma":0.11770733,"teacher_disagreement_score":0.07038952,"about_ca_system_score_codex":0.00064390374,"about_ca_system_score_gemma":0.0012530455,"threshold_uncertainty_score":0.9999077},"labels":[],"label_agreement":null},{"id":"W4399932143","doi":"10.3201/eid3007.231660","title":"Body Louse Pathogen Surveillance among Persons Experiencing Homelessness, Canada, 2020–2021","year":2024,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Bartonella species infections research","field":"Immunology and Microbiology","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Louse; Pathogen; Biology; Pathogenic organism; Environmental health; Virology; Medicine; Immunology; Microbiology; Zoology","score_opus":0.0041598359036024955,"score_gpt":0.23336790698698925,"score_spread":0.22920807108338676,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4399932143","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97130394,0.019460138,0.00017721008,0.00019134278,0.004007656,0.00027227474,0.00039564227,0.00051555585,0.0036762436],"genre_scores_gemma":[0.9949214,0.00042099357,0.0000022574793,0.00004443601,0.00029335415,0.00015514369,0.00019431315,0.000062855615,0.0039052332],"study_design_codex":"observational","study_design_gemma":"not_applicable","domain_scores_codex":[0.99787456,0.0002798369,0.0003118262,0.00064310565,0.00013904939,0.00075163733],"domain_scores_gemma":[0.99893236,0.00030338526,0.00005555581,0.00048333034,0.00011656347,0.0001088329],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00016300511,0.0003108847,0.00034689216,0.00022727142,0.00073782797,0.00014684317,0.00024699947,0.0001478919,0.005956527],"category_scores_gemma":[0.00025906344,0.00030821428,0.00018278584,0.00078944326,0.00032741265,0.00021868432,0.00018646587,0.00048806213,0.0003906658],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000046712663,0.00034787157,0.74613315,0.0002967373,0.0010337736,0.0007966028,0.0032399157,0.00070203625,0.053755842,0.00084453064,0.17961454,0.013188277],"study_design_scores_gemma":[0.0012512703,0.00021017685,0.35403937,0.00027153565,0.00017765592,0.00043184418,0.005602299,0.0006680149,0.0056041107,0.000105760715,0.6300384,0.0015995881],"about_ca_topic_score_codex":0.14496131,"about_ca_topic_score_gemma":0.2818989,"teacher_disagreement_score":0.4504238,"about_ca_system_score_codex":0.000520476,"about_ca_system_score_gemma":0.00084371463,"threshold_uncertainty_score":0.999937},"labels":[],"label_agreement":null},{"id":"W4399932709","doi":"10.3201/eid3007.231594","title":"Genomic Epidemiology of Large Blastomycosis Outbreak, Ontario, Canada, 2021","year":2024,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Fungal Infections and Studies","field":"Medicine","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Outbreak; Epidemiology; Virology; Molecular epidemiology; Blastomycosis; Medicine; Biology; Genetics; Genotype; Immunology; Pathology; Gene","score_opus":0.01223236781658866,"score_gpt":0.27995156835037793,"score_spread":0.2677192005337893,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4399932709","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9775826,0.01151628,0.00021037577,0.00079288724,0.0014659216,0.00019046335,0.00014251305,0.00012411266,0.007974886],"genre_scores_gemma":[0.99639994,0.000255363,0.000024747786,0.00041509667,0.00027638316,0.000040669653,0.00003648522,0.000023855862,0.0025274465],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99883544,0.000059606242,0.00036078735,0.00029275657,0.000115816416,0.00033559272],"domain_scores_gemma":[0.99915373,0.00032309387,0.0000593574,0.00021993136,0.00009098116,0.00015292616],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00014767809,0.00017598094,0.0004670369,0.00016998171,0.00015784384,0.000005974321,0.00003944251,0.00005052214,0.0019789464],"category_scores_gemma":[0.00029317176,0.00015235772,0.0002186445,0.00024897105,0.0000604109,0.00004515406,0.00006344745,0.0001960229,0.000034544646],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000019589412,0.00014798534,0.9570337,0.00021921098,0.0005096329,0.00005542322,0.00019622542,0.00015330724,0.000113124675,0.0009122783,0.039722405,0.000917104],"study_design_scores_gemma":[0.0003644884,0.00017907338,0.87603515,0.00019268229,0.00046555029,0.00005781582,0.00010631308,0.00035247073,0.00005245668,0.00019598677,0.12183514,0.00016288589],"about_ca_topic_score_codex":0.82345754,"about_ca_topic_score_gemma":0.9120579,"teacher_disagreement_score":0.08860038,"about_ca_system_score_codex":0.0005697379,"about_ca_system_score_gemma":0.000958512,"threshold_uncertainty_score":0.9989334},"labels":[],"label_agreement":null},{"id":"W4400968008","doi":"10.3201/eid3008.231137","title":"Spatiotemporal Modeling of Cholera, Uvira, Democratic Republic of the Congo, 2016−2020","year":2024,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Vibrio bacteria research studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Canadian Institutes of Health Research","keywords":"Cholera; Democracy; Geography; Psychological intervention; Cluster analysis; Political science; Medicine; Virology; Computer science; Politics; Artificial intelligence","score_opus":0.008342701941779971,"score_gpt":0.26598654148278067,"score_spread":0.2576438395410007,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4400968008","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9925849,0.0048351763,0.000770907,0.0003765391,0.00034187737,0.0001951489,0.000064387816,0.000036033958,0.0007950277],"genre_scores_gemma":[0.99890506,0.00035740636,0.00001964024,0.00004850698,0.000190363,0.00002705209,0.000032976073,0.000021885495,0.00039712578],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.999017,0.00008203883,0.00027128655,0.0002550635,0.00018905019,0.0001855806],"domain_scores_gemma":[0.9993618,0.000022637143,0.00007478514,0.00034671865,0.00013874643,0.000055277724],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00011907965,0.00012992146,0.00016815003,0.000059710015,0.000096704585,0.000030711642,0.00016364288,0.00004996537,0.00003913784],"category_scores_gemma":[0.00038811736,0.00009729235,0.00018498949,0.00021953374,0.00013146442,0.000011434083,0.00021759911,0.00008111597,0.0000029022906],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00019186267,0.0006533233,0.18728408,0.0024616322,0.00225625,0.000017796732,0.0009747649,0.023817701,0.72647357,0.0006386723,0.044974413,0.010255943],"study_design_scores_gemma":[0.0057563474,0.0034963943,0.24682161,0.0034805685,0.0015340138,0.000101382946,0.0008632649,0.3077812,0.35723352,0.0063131396,0.063521236,0.0030973323],"about_ca_topic_score_codex":0.0001257802,"about_ca_topic_score_gemma":0.000024604611,"teacher_disagreement_score":0.36924005,"about_ca_system_score_codex":0.00001791379,"about_ca_system_score_gemma":0.00020745215,"threshold_uncertainty_score":0.3967467},"labels":[],"label_agreement":null},{"id":"W4400968075","doi":"10.3201/eid3008.240225","title":"Wastewater Surveillance to Confirm Differences in Influenza A Infection between Michigan, USA, and Ontario, Canada, September 2022–March 2023","year":2024,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Respiratory viral infections research","field":"Medicine","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"McMaster University; University of Windsor","funders":"Government of Canada; Ministry of Environment; Ontario Genomics; Canadian Bee Research Fund","keywords":"Windsor; Wastewater; Environmental health; Influenza A virus; Geography; Medicine; Virology; Environmental engineering; Biology; Environmental science; Virus; Ecology","score_opus":0.0301998953644901,"score_gpt":0.32789756478237303,"score_spread":0.29769766941788295,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4400968075","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99498516,0.0008365099,0.000021401242,0.0003222418,0.0005279968,0.0006951183,0.000081402824,0.00013584201,0.0023943195],"genre_scores_gemma":[0.9951751,0.000044013323,0.00000438574,0.00034560202,0.00028863573,0.00019876526,0.000031865366,0.00004301398,0.0038685794],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99764967,0.00018065442,0.00046172432,0.0006326468,0.0005090083,0.00056627044],"domain_scores_gemma":[0.9987509,0.0003204519,0.00004116657,0.0003104063,0.00012320402,0.00045383358],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00028303007,0.00030913405,0.00048313563,0.00074931275,0.00019514347,0.00018442866,0.000076877106,0.00010353918,0.0016520785],"category_scores_gemma":[0.00025562925,0.00027863475,0.00009037589,0.0010304338,0.00010016234,0.00021476648,0.00013544002,0.000542212,0.00015665324],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00004779127,0.00006619097,0.99167955,0.00032284236,0.00015448648,0.0001129336,0.00019335262,0.00006965233,0.0006356419,0.000017505914,0.0054639145,0.001236139],"study_design_scores_gemma":[0.000527833,0.00029586337,0.94708383,0.0003013638,0.00005569888,0.00002875761,0.00003091719,0.00008910522,0.00021161596,0.00004356829,0.05104665,0.00028481192],"about_ca_topic_score_codex":0.8708594,"about_ca_topic_score_gemma":0.9896667,"teacher_disagreement_score":0.11880733,"about_ca_system_score_codex":0.0007221633,"about_ca_system_score_gemma":0.0014212785,"threshold_uncertainty_score":0.99996656},"labels":[],"label_agreement":null},{"id":"W4401420831","doi":"10.3201/eid3009.231595","title":"Emerging <i>Leishmania donovani</i> Lineages Associated with Cutaneous Leishmaniasis, Himachal Pradesh, India, 2023","year":2024,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Research on Leishmaniasis Studies","field":"Medicine","cited_by":10,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Canadian Institutes of Health Research; International Centre for Genetic Engineering and Biotechnology; Indian Council of Medical Research","keywords":"Leishmania donovani; Endemic diseases; Leishmaniasis; Cutaneous leishmaniasis; Leishmania; Neglected tropical diseases; Biology; Medicine; Virology; Veterinary medicine; Traditional medicine; Environmental health; Geography; Visceral leishmaniasis; Immunology; Public health; Pathology; Parasite hosting","score_opus":0.011763481637064685,"score_gpt":0.28553773487510337,"score_spread":0.27377425323803867,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4401420831","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.94922334,0.019629126,0.00033413657,0.0041080164,0.0014697866,0.0017507904,0.00032278232,0.0041376324,0.019024365],"genre_scores_gemma":[0.990714,0.0021257277,0.00008393094,0.0006669013,0.0011589176,0.00029722278,0.00027697886,0.00026262566,0.00441371],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99509305,0.00021122905,0.0007164273,0.0012415547,0.0013938528,0.0013438859],"domain_scores_gemma":[0.9973525,0.0006824337,0.00019797224,0.0006859493,0.00046274957,0.0006184033],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00037781856,0.0007673331,0.0009823745,0.0009160384,0.0007055911,0.00046451992,0.00028797882,0.0002039456,0.0007155611],"category_scores_gemma":[0.001313068,0.0006521032,0.00043006174,0.0020235179,0.00037429118,0.000540958,0.00027359658,0.0010210689,0.00037341646],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00057026313,0.0025475065,0.7837432,0.0023186158,0.007839906,0.016400132,0.0019851997,0.0005845108,0.0016583172,0.0012752775,0.14669944,0.03437762],"study_design_scores_gemma":[0.0113250455,0.007822318,0.5592139,0.010789195,0.007974068,0.0070756185,0.0032972966,0.008353889,0.0025428652,0.0012272276,0.37478074,0.0055978666],"about_ca_topic_score_codex":0.00031613366,"about_ca_topic_score_gemma":0.0003559283,"teacher_disagreement_score":0.2280813,"about_ca_system_score_codex":0.00070627074,"about_ca_system_score_gemma":0.0005593683,"threshold_uncertainty_score":0.999593},"labels":[],"label_agreement":null},{"id":"W4401500731","doi":"10.3201/eid3009.231344","title":"Powassan Virus Encephalitis After Tick Bite, Manitoba, Canada","year":2024,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Viral Infections and Vectors","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Tick; Encephalitis; Virology; Vector (molecular biology); Biology; Medicine; Virus","score_opus":0.008005909237268162,"score_gpt":0.24828383200282697,"score_spread":0.24027792276555882,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4401500731","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.984293,0.003497027,0.00011645136,0.00042497806,0.002414752,0.00024384695,0.00015073169,0.00062722515,0.008232025],"genre_scores_gemma":[0.9966053,0.00014418262,0.00000889811,0.00073231896,0.0007362367,0.00010412602,0.0000471915,0.000050018487,0.0015717418],"study_design_codex":"observational","study_design_gemma":"not_applicable","domain_scores_codex":[0.9987418,0.000038039056,0.00023642973,0.00034820352,0.00028057807,0.00035493897],"domain_scores_gemma":[0.99929976,0.000062140614,0.000026936867,0.00025358182,0.000070047456,0.0002875148],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00004593128,0.0002220767,0.00022637211,0.00022030066,0.0001605425,0.00010101189,0.000045913002,0.000053951808,0.0020698728],"category_scores_gemma":[0.00007704829,0.00019693648,0.00017143758,0.00052068196,0.000056414156,0.00016271744,0.000036960973,0.00020286793,0.00014747625],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007674146,0.000434961,0.8627377,0.0007703446,0.0006429907,0.002843426,0.00019238966,0.00013120162,0.0007815496,0.0009566947,0.10848959,0.0219424],"study_design_scores_gemma":[0.00066136546,0.00035357193,0.48394674,0.00060019305,0.0007583306,0.0004498553,0.00021218469,0.001112235,0.0005232324,0.0002576697,0.51049036,0.00063428306],"about_ca_topic_score_codex":0.44335806,"about_ca_topic_score_gemma":0.5035012,"teacher_disagreement_score":0.40200076,"about_ca_system_score_codex":0.00041951335,"about_ca_system_score_gemma":0.000542953,"threshold_uncertainty_score":0.99884236},"labels":[],"label_agreement":null},{"id":"W4401815512","doi":"10.3201/eid3009.240510","title":"Retrospective Seroprevalence of Orthopoxvirus Antibodies among Key Populations, Kenya","year":2024,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Poxvirus research and outbreaks","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Canadian Institutes of Health Research; U.S. Department of Agriculture; International Development Research Centre; U.S. Department of Defense","keywords":"Seroprevalence; Virology; Orthopoxvirus; Medicine; Antibody; Immunology; Biology; Serology; Genetics; Vaccinia; Gene","score_opus":0.013330603049116698,"score_gpt":0.29064177507075273,"score_spread":0.277311172021636,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4401815512","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9724032,0.021285834,0.00020294188,0.0000551879,0.0011973784,0.00021929003,0.00031770868,0.00046329945,0.003855137],"genre_scores_gemma":[0.9970791,0.00087653723,0.000014375688,0.000021163863,0.00007403135,0.000027868546,0.0001009337,0.000026152635,0.0017798794],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.998691,0.00016071687,0.00029289705,0.0003653324,0.00009434373,0.00039566067],"domain_scores_gemma":[0.9993892,0.00008520168,0.0000733899,0.00027807747,0.000119510725,0.00005466101],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0001251358,0.00019193497,0.00027690086,0.00030931164,0.00026350172,0.00004314267,0.00015476097,0.0001121366,0.0011178758],"category_scores_gemma":[0.00033460607,0.00017197843,0.0002024324,0.00040715406,0.000379536,0.00027312682,0.00010772513,0.00028156792,0.00035740467],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00003624056,0.00011887979,0.9755498,0.00018188133,0.00029326658,0.000025604531,0.00035215754,0.00007602115,0.010412894,0.0045342725,0.0045964327,0.0038225313],"study_design_scores_gemma":[0.00038598018,0.00014977115,0.98590535,0.00028880266,0.00015031475,0.000026649845,0.00009487503,0.000117415104,0.0043890732,0.0019436853,0.006272632,0.00027543446],"about_ca_topic_score_codex":0.00069485663,"about_ca_topic_score_gemma":0.00020964044,"teacher_disagreement_score":0.024675835,"about_ca_system_score_codex":0.00007806924,"about_ca_system_score_gemma":0.00009974117,"threshold_uncertainty_score":0.99979526},"labels":[],"label_agreement":null},{"id":"W4402147269","doi":"10.3201/eid3010.241118","title":"Presumed Transmission of 2 Distinct Monkeypox Virus Variants from Central African Republic to Democratic Republic of the Congo","year":2024,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Poxvirus research and outbreaks","field":"Immunology and Microbiology","cited_by":9,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Canadian Institutes of Health Research; Agricultural Research Service; Agence Française de Développement; U.S. Department of Defense; International Development Research Centre; Australian Government; Institut de Recherche pour le Développement; U.S. Department of Agriculture","keywords":"Monkeypox; Transmission (telecommunications); Virology; Subclade; Democracy; Virus; Biology; Clade; Geography; Political science; Phylogenetics; Genetics; Gene","score_opus":0.009924931020463719,"score_gpt":0.2539306241193523,"score_spread":0.2440056930988886,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4402147269","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9876153,0.006905868,0.0007088482,0.0005806581,0.0009608119,0.00048406384,0.0008650006,0.00019736716,0.0016821108],"genre_scores_gemma":[0.99865854,0.00011756074,0.00001097654,0.000066013345,0.000055785287,0.000045304423,0.00009012493,0.000025458998,0.00093021785],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9981349,0.00039268093,0.00044307474,0.00039611547,0.00013248142,0.0005007333],"domain_scores_gemma":[0.9988034,0.00036862446,0.00010742102,0.0004920549,0.000091274764,0.0001372211],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00015070103,0.00019993179,0.00033453695,0.00020454105,0.00019585263,0.00003171604,0.00036585412,0.000110777895,0.0013360062],"category_scores_gemma":[0.00076393154,0.00013938971,0.00025645725,0.0006131974,0.00022800583,0.00014648304,0.00014933701,0.0002546241,0.00003689778],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0010724374,0.0017183629,0.113702014,0.00067890726,0.0026209971,0.000043851698,0.0045721503,0.0003149035,0.6455108,0.0013920292,0.07894107,0.14943251],"study_design_scores_gemma":[0.001292166,0.00038631677,0.85798687,0.0005236157,0.00036637016,0.000021125072,0.00012704288,0.00029060215,0.07042274,0.0021996612,0.066000566,0.00038295274],"about_ca_topic_score_codex":0.0029065865,"about_ca_topic_score_gemma":0.00016942942,"teacher_disagreement_score":0.7442848,"about_ca_system_score_codex":0.00006166216,"about_ca_system_score_gemma":0.00030191982,"threshold_uncertainty_score":0.9995769},"labels":[],"label_agreement":null},{"id":"W4402828374","doi":"10.3201/eid3010.240191","title":"Age- and Sex-Specific Differences in Lyme Disease Health-Related Behaviors, Ontario, Canada, 2015–2022","year":2024,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Vector-borne infectious diseases","field":"Immunology and Microbiology","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Lyme disease; Men who have sex with men; Medicine; Disease; Demography; Environmental health; Gerontology; Virology; Internal medicine; Syphilis; Human immunodeficiency virus (HIV)","score_opus":0.00936691208658465,"score_gpt":0.23607774251819394,"score_spread":0.22671083043160928,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4402828374","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.88749605,0.107588574,0.000009094268,0.0005682278,0.0027073033,0.00045065922,0.0003725157,0.00056192937,0.00024563845],"genre_scores_gemma":[0.99470484,0.00088594074,0.0000011045229,0.00022590462,0.00006513211,0.00017142273,0.0004576693,0.000060660044,0.0034273504],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.997219,0.00035865683,0.000631697,0.0008741679,0.00013769751,0.0007787281],"domain_scores_gemma":[0.998916,0.00024250794,0.00011879081,0.000397466,0.000035651963,0.00028963445],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0001476657,0.00046907345,0.0005746256,0.00043616007,0.00044714115,0.00013139105,0.00018829151,0.0001367073,0.0031915386],"category_scores_gemma":[0.00006625915,0.00046458666,0.00015898512,0.0004803811,0.00027251287,0.00021977721,0.00013895529,0.000560133,0.00007606258],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000506506,0.00045054467,0.9491635,0.00013711241,0.0002726906,0.0009030059,0.0008087534,0.000040032057,0.00025707576,0.0006237907,0.04143337,0.005859456],"study_design_scores_gemma":[0.00087440875,0.0001464837,0.9504234,0.00023600795,0.0001536829,0.0000935729,0.00015544776,0.000015640902,0.00002243129,0.0005462236,0.0467688,0.00056387665],"about_ca_topic_score_codex":0.82639605,"about_ca_topic_score_gemma":0.9042497,"teacher_disagreement_score":0.10720876,"about_ca_system_score_codex":0.001088026,"about_ca_system_score_gemma":0.001969414,"threshold_uncertainty_score":0.9997806},"labels":[],"label_agreement":null},{"id":"W4402889982","doi":"10.3201/eid3011.241120","title":"Analysis of Monkeypox Virus Exposures and Lesions by Anatomic Site","year":2024,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Poxvirus research and outbreaks","field":"Immunology and Microbiology","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Centers for Disease Control and Prevention; Public Health Agency; Public Health Agency of Canada","keywords":"Monkeypox; Virology; Virus; Medicine; Biology; Vaccinia","score_opus":0.006964964319654941,"score_gpt":0.27048172175571455,"score_spread":0.2635167574360596,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4402889982","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9349494,0.06297984,0.00012924738,0.00005730489,0.00019767403,0.00008345327,0.0009261708,0.00017811642,0.00049876864],"genre_scores_gemma":[0.996937,0.0018709584,0.0000015386609,0.00004929501,0.000015986734,0.000018417739,0.00026669694,0.000013787848,0.00082634244],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99906963,0.00011999335,0.00020170063,0.0002819862,0.000049301725,0.00027740834],"domain_scores_gemma":[0.99946535,0.00021437183,0.000037605274,0.00018640296,0.000035350928,0.000060939314],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00008334983,0.00013682684,0.00027639733,0.0005714702,0.00016384038,0.000034881647,0.00008306036,0.00008490686,0.00081585394],"category_scores_gemma":[0.00009871428,0.00011885995,0.00018891421,0.0006599156,0.0001964516,0.00010126892,0.00007918489,0.00015128899,0.00010155092],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009574306,0.00031634027,0.44993147,0.00013715595,0.006782668,0.000032744996,0.00071810704,0.0001296748,0.45224935,0.00066008867,0.04879522,0.04015144],"study_design_scores_gemma":[0.002160707,0.00066588185,0.6455669,0.00023286819,0.008183014,0.000053201085,0.00042023914,0.0021958218,0.09045577,0.00088456564,0.24800736,0.0011736926],"about_ca_topic_score_codex":0.0014113251,"about_ca_topic_score_gemma":0.0002865808,"teacher_disagreement_score":0.36179358,"about_ca_system_score_codex":0.000025362873,"about_ca_system_score_gemma":0.000051969317,"threshold_uncertainty_score":0.89330286},"labels":[],"label_agreement":null},{"id":"W4403240367","doi":"10.3201/eid3012.241470","title":"Replication-Competent Oropouche Virus in Semen of Traveler Returning to Italy from Cuba, 2024","year":2024,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Viral Infections and Vectors","field":"Medicine","cited_by":54,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Ministero della Salute; Public Health Agency; Public Health Agency of Canada; Centers for Disease Control and Prevention; International Society of Travel Medicine","keywords":"Semen; Virology; Sexual transmission; Biology; Medicine; Immunology; Human immunodeficiency virus (HIV); Genetics","score_opus":0.013705865898281143,"score_gpt":0.3055449060031924,"score_spread":0.29183904010491124,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4403240367","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99269086,0.001257983,0.00058786845,0.0004814151,0.0006982681,0.00036789963,0.000082835635,0.0002601432,0.0035727075],"genre_scores_gemma":[0.99825025,0.00010010182,0.00009421322,0.00017009304,0.00030204072,0.00009124312,0.00007341403,0.000039669656,0.00087899977],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9986397,0.000043263728,0.00040070788,0.00048076842,0.00020892889,0.0002266273],"domain_scores_gemma":[0.9991358,0.00009520647,0.00005262332,0.0004692918,0.00007417499,0.00017293163],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00012728207,0.00017920951,0.00030436405,0.00044736752,0.00006784041,0.000043015047,0.000065047876,0.00006078581,0.0013051328],"category_scores_gemma":[0.00023632952,0.00016099651,0.00017705404,0.00088151346,0.000035328365,0.00011936573,0.00004649084,0.00021162191,0.00012144302],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012724042,0.00087031844,0.8441269,0.00045777156,0.0005743666,0.00013121155,0.002751286,0.0013535722,0.10465917,0.00054682157,0.018455321,0.025946066],"study_design_scores_gemma":[0.0013023942,0.0008136466,0.92085886,0.0018114742,0.0006853664,0.000044089204,0.00056468556,0.007409445,0.021000694,0.0008357274,0.044044867,0.00062873657],"about_ca_topic_score_codex":0.002920472,"about_ca_topic_score_gemma":0.00039859582,"teacher_disagreement_score":0.08365847,"about_ca_system_score_codex":0.00018291756,"about_ca_system_score_gemma":0.00011298282,"threshold_uncertainty_score":0.9996078},"labels":[],"label_agreement":null},{"id":"W4403620247","doi":"10.3201/eid3011.241068","title":"Invasive Group A <i>Streptococcus</i> Hypervirulent M1<sub>UK</sub> Clone, Canada, 2018–2023","year":2024,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Streptococcal Infections and Treatments","field":"Medicine","cited_by":9,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Streptococcus; Microbiology; clone (Java method); Biology; Streptococcus pyogenes; Bacteria; Genetics; Staphylococcus aureus; Gene","score_opus":0.009097500158309372,"score_gpt":0.24555007467011397,"score_spread":0.2364525745118046,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4403620247","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98310244,0.0044221855,0.00009485738,0.00058711675,0.002370982,0.0011400926,0.0004148391,0.0007540161,0.007113473],"genre_scores_gemma":[0.9961331,0.00061307434,0.000010265491,0.0007677753,0.00067326915,0.00071712537,0.00035769047,0.00008401031,0.0006436813],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9977587,0.00006055552,0.00043628117,0.00071155163,0.00044372442,0.00058920955],"domain_scores_gemma":[0.9985368,0.00022603678,0.000082785424,0.00050557003,0.0001162768,0.00053252286],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00006329912,0.00044727643,0.00044989525,0.00030519933,0.00034414537,0.0001221473,0.00008789982,0.00010656593,0.000737318],"category_scores_gemma":[0.0001549025,0.00039588063,0.00036280812,0.0008131407,0.00009404759,0.0001669042,0.000093079514,0.0003016011,0.00035258778],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006503239,0.0009537981,0.8009099,0.000607995,0.0015391291,0.0016992601,0.00008094408,0.00013798194,0.007861888,0.000457391,0.1690766,0.0166101],"study_design_scores_gemma":[0.0059985635,0.0017509849,0.8289865,0.0026427319,0.0041933646,0.00081124157,0.0003453059,0.00076918554,0.026622882,0.001309306,0.12457972,0.0019901805],"about_ca_topic_score_codex":0.12498698,"about_ca_topic_score_gemma":0.14713915,"teacher_disagreement_score":0.044496883,"about_ca_system_score_codex":0.0007631341,"about_ca_system_score_gemma":0.0009617077,"threshold_uncertainty_score":0.9998493},"labels":[],"label_agreement":null},{"id":"W4404792291","doi":"10.3201/eid3012.240757","title":"Experimental Infection of Reindeer with Jamestown Canyon Virus","year":2024,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Zoonotic diseases and public health","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institute of Neurological Disorders and Stroke; Natural Sciences and Engineering Research Council of Canada; Centers for Disease Control and Prevention; ArcticNet; Dana-Farber/Harvard Cancer Center; National Cancer Institute; National Institutes of Health; Brigham and Women's Hospital","keywords":"Seroprevalence; Virology; Virus; Canyon; Outbreak; Biology; The arctic; Antibody; Geography; Immunology; Serology","score_opus":0.009699288895684957,"score_gpt":0.2985567958566754,"score_spread":0.28885750696099044,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4404792291","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9792416,0.003961736,0.0004755201,0.00030451824,0.000585144,0.00034627164,0.00003792434,0.00047499975,0.014572265],"genre_scores_gemma":[0.9986806,0.00012031696,0.000024157582,0.0002870239,0.00033422894,0.000059062393,0.00005143266,0.0000437584,0.00039944347],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9988219,0.00004076516,0.0002503607,0.00029895065,0.00031929655,0.00026873127],"domain_scores_gemma":[0.9992319,0.00004901351,0.00005659459,0.00024265586,0.00008432292,0.00033556749],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.000083971994,0.00018063831,0.00026547708,0.0002605832,0.00008894612,0.000044259086,0.000033191358,0.000052458083,0.0011333408],"category_scores_gemma":[0.000061767016,0.00014165275,0.00014877372,0.00045049738,0.00008671022,0.00017718862,0.000023076007,0.00014185233,0.000032963268],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.001340358,0.0056181634,0.8219428,0.006034089,0.0018156101,0.0008576152,0.0030039984,0.0013688968,0.006931722,0.014668591,0.03254721,0.10387093],"study_design_scores_gemma":[0.008084165,0.009379282,0.6852555,0.0049412576,0.0029168383,0.0010780698,0.0011792032,0.0073345825,0.01344606,0.00079616386,0.26382488,0.0017639832],"about_ca_topic_score_codex":0.0026828542,"about_ca_topic_score_gemma":0.000058749964,"teacher_disagreement_score":0.23127769,"about_ca_system_score_codex":0.00016801231,"about_ca_system_score_gemma":0.00057037023,"threshold_uncertainty_score":0.99977976},"labels":[],"label_agreement":null},{"id":"W4406164820","doi":"10.3201/eid3102.241472","title":"Diphtheria Toxin–Producing <i>Corynebacterium ramonii</i> in Inner-City Population, Vancouver, British Columbia, Canada, 2019–2023","year":2025,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Diphtheria, Corynebacterium, and Tetanus","field":"Biochemistry, Genetics and Molecular Biology","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"British Columbia Centre for Disease Control","keywords":"Diphtheria; Corynebacterium diphtheriae; Diphtheria toxin; Microbiology; Population; Medicine; Toxin; Virology; Biology; Environmental health; Vaccination","score_opus":0.002392342739711594,"score_gpt":0.20098068960700594,"score_spread":0.19858834686729435,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4406164820","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99210745,0.0012172717,0.00008770832,0.0000596581,0.0031468796,0.00034105868,0.00023684071,0.00008153114,0.0027215756],"genre_scores_gemma":[0.9874765,0.00015602606,0.000018359997,0.00073715,0.00034413417,0.00008027337,0.00040720063,0.00004414366,0.010736186],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9979921,0.00012678282,0.00045709597,0.0007266815,0.00019251432,0.00050483993],"domain_scores_gemma":[0.9989879,0.000026023947,0.00015155255,0.00054940395,0.00014107676,0.00014400318],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00014660737,0.00024819185,0.000341467,0.000073781826,0.00026954332,0.00023553325,0.00024199937,0.00013904588,0.00022506],"category_scores_gemma":[0.00030468672,0.00038779672,0.0001279718,0.00040906636,0.0000652899,0.000026547976,0.00017067512,0.0001495746,0.0000028606944],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000040904964,0.00022431981,0.8963463,0.00007665088,0.00010340001,0.00003436396,0.00001798498,0.00019618461,0.0071587875,0.0000028124823,0.0897977,0.0060006483],"study_design_scores_gemma":[0.0009627132,0.00007199723,0.9324085,0.00011575654,0.00005766568,0.0000099133895,0.000051319323,0.000019292835,0.000563005,0.0001685012,0.06509004,0.00048131062],"about_ca_topic_score_codex":0.84602654,"about_ca_topic_score_gemma":0.9879182,"teacher_disagreement_score":0.14189166,"about_ca_system_score_codex":0.00019597,"about_ca_system_score_gemma":0.00055339554,"threshold_uncertainty_score":0.99985737},"labels":[],"label_agreement":null},{"id":"W4406501592","doi":"10.3201/eid3102.241146","title":"Human Infection with Avian Influenza A(H9N2) Virus, Vietnam, April 2024","year":2025,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Influenza Virus Research Studies","field":"Medicine","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Centers for Disease Control and Prevention; Public Health Agency; Public Health Agency of Canada","keywords":"Virology; Influenza A virus subtype H5N1; Virus; Influenza A virus; Avian influenza virus; H5N1 genetic structure; Transmission and infection of H5N1; Human mortality from H5N1; Biology; Medicine; Microbiology; Coronavirus disease 2019 (COVID-19); Pathology; Infectious disease (medical specialty)","score_opus":0.025903708449484694,"score_gpt":0.3619884991214184,"score_spread":0.3360847906719337,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4406501592","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9397491,0.0026959626,0.00031611967,0.00046125072,0.00052503543,0.0010727821,0.00004029659,0.0009802617,0.05415918],"genre_scores_gemma":[0.9906785,0.00025338036,0.00004065026,0.002765448,0.00036205183,0.00034357325,0.000027871496,0.00006574988,0.0054627643],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9976085,0.00013033205,0.00043682056,0.00058550335,0.0005712778,0.0006675693],"domain_scores_gemma":[0.9984963,0.00007830838,0.00012105226,0.00060826965,0.00041470552,0.000281342],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00021058762,0.00041521012,0.0005406899,0.00080151344,0.0009443407,0.00011118477,0.00011630533,0.00011761295,0.00060494186],"category_scores_gemma":[0.00043282323,0.0003492061,0.00022898884,0.0012867802,0.00031941375,0.00027548888,0.00018821476,0.0005057895,0.00019824016],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00025717053,0.00060829264,0.9746904,0.00062346103,0.000852691,0.000063819774,0.0001723442,0.00037755567,0.001622182,0.0011149702,0.016397929,0.003219235],"study_design_scores_gemma":[0.00369373,0.0006624478,0.8494549,0.000758976,0.0007252182,0.000023824765,0.00009353795,0.00009183169,0.0007561257,0.0005136004,0.14275949,0.00046631997],"about_ca_topic_score_codex":0.0011695464,"about_ca_topic_score_gemma":0.00059827685,"teacher_disagreement_score":0.12636155,"about_ca_system_score_codex":0.0004291746,"about_ca_system_score_gemma":0.00031343568,"threshold_uncertainty_score":0.999896},"labels":[],"label_agreement":null},{"id":"W4406501652","doi":"10.3201/eid3102.241532","title":"Sin Nombre Virus as Unlikely Reverse Zoonotic Threat","year":2025,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Viral Infections and Vectors","field":"Medicine","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Public Health Agency; Public Health Agency of Canada","keywords":"Virology; Biology; Virus","score_opus":0.008513691771222649,"score_gpt":0.29667307831578105,"score_spread":0.2881593865445584,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4406501652","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.94206,0.0009933892,0.00042635246,0.0013554263,0.0012979715,0.00046125715,0.000023332179,0.0007576305,0.052624658],"genre_scores_gemma":[0.9880623,0.00019103636,0.000024115858,0.002137386,0.00023691323,0.000056416746,0.00003785245,0.000031200423,0.009222736],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99880415,0.000051692576,0.000276764,0.0003682882,0.00016810225,0.00033098436],"domain_scores_gemma":[0.9991322,0.000071176546,0.00006612786,0.0004112452,0.00011786508,0.00020135335],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00006756105,0.0002460462,0.00033720952,0.00039118415,0.00034295503,0.00005186955,0.00006770324,0.00009239251,0.0010835114],"category_scores_gemma":[0.00029192597,0.00022531829,0.00027931997,0.00077156123,0.00008036393,0.00015180116,0.00006149481,0.00021619872,0.00042904797],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002727454,0.001998206,0.8886422,0.00048645062,0.0007837988,0.00021394716,0.00017114732,0.00053882564,0.003230884,0.0060247416,0.07912919,0.018507892],"study_design_scores_gemma":[0.00787011,0.0017544103,0.65477675,0.0014394124,0.003766908,0.00028842813,0.00046892572,0.0015247033,0.0044215308,0.009327164,0.31296468,0.0013969648],"about_ca_topic_score_codex":0.0017382989,"about_ca_topic_score_gemma":0.00017154973,"teacher_disagreement_score":0.23386541,"about_ca_system_score_codex":0.00028378496,"about_ca_system_score_gemma":0.00024345847,"threshold_uncertainty_score":0.99982965},"labels":[],"label_agreement":null},{"id":"W4406659484","doi":"10.3201/eid3102.240754","title":"Arbovirus Epidemics as Global Health Imperative, Africa, 2023","year":2024,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Mosquito-borne diseases and control","field":"Medicine","cited_by":12,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Wilfrid Laurier University; University of Ottawa","funders":"Centers for Disease Control and Prevention; International Development Research Centre","keywords":"Arbovirus; Virology; Arbovirus Infections; Global health; Geography; Environmental health; Medicine; Public health; Virus","score_opus":0.009898662657470806,"score_gpt":0.3378545378994633,"score_spread":0.3279558752419925,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4406659484","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.6715246,0.24732703,0.0024450605,0.015153286,0.004473224,0.0020130735,0.0012829129,0.003305223,0.05247562],"genre_scores_gemma":[0.9929425,0.0011605046,0.000021482427,0.0030607497,0.000984221,0.00013010787,0.00009719391,0.000045515142,0.0015577052],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99792343,0.000109008746,0.0004151347,0.00058252696,0.0003696717,0.00060023053],"domain_scores_gemma":[0.9986161,0.000116289266,0.000075638636,0.00038666496,0.000091693786,0.0007135851],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00015434259,0.00031014165,0.0004820728,0.00013169856,0.0002406092,0.00012919337,0.0000959154,0.00007113455,0.001072214],"category_scores_gemma":[0.00034402363,0.00027353325,0.0004236529,0.00065707206,0.0000757339,0.0001565481,0.000061091145,0.00021379869,0.00068361254],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006718924,0.0017695659,0.28885624,0.0020045002,0.00217309,0.0015764941,0.00067337294,0.0007471835,0.00025900945,0.05959104,0.42789015,0.21378747],"study_design_scores_gemma":[0.006465386,0.0033798714,0.25889543,0.00219837,0.0029323448,0.00066737836,0.0008563146,0.028957825,0.000052323936,0.027153702,0.66653025,0.0019107779],"about_ca_topic_score_codex":0.00078383693,"about_ca_topic_score_gemma":0.00005415616,"teacher_disagreement_score":0.32141796,"about_ca_system_score_codex":0.00045508638,"about_ca_system_score_gemma":0.0010023791,"threshold_uncertainty_score":0.9999717},"labels":[],"label_agreement":null},{"id":"W4408543868","doi":"10.3201/eid3104.241463","title":"Population-Based Matched Cohort Study of COVID-19 Healthcare Costs, Ontario, Canada","year":2025,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"COVID-19 and healthcare impacts","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Coronavirus disease 2019 (COVID-19); Health care; Cohort; Medicine; Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2); 2019-20 coronavirus outbreak; Cohort study; Population; Pandemic; Geography; Demography; Environmental health; Virology; Outbreak; Economic growth; Disease; Internal medicine; Infectious disease (medical specialty); Economics","score_opus":0.01852901913315445,"score_gpt":0.3529613345496432,"score_spread":0.3344323154164887,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4408543868","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.988469,0.0003843877,0.00010453478,0.008130991,0.00058035715,0.0017328067,0.00006673437,0.00019711193,0.00033409504],"genre_scores_gemma":[0.9862627,0.000010924694,0.0000066658313,0.012989002,0.000062466795,0.00011185271,0.0002064045,0.000022026443,0.00032799374],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99802125,0.00015173394,0.0005460412,0.00039345495,0.00052621285,0.00036130793],"domain_scores_gemma":[0.9979724,0.0003633239,0.00018736035,0.00052027736,0.00025754183,0.00069906685],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00018283128,0.00022765873,0.0006144224,0.00033918806,0.0003233895,0.000016846541,0.000086903005,0.00006988924,0.00039155272],"category_scores_gemma":[0.0010982832,0.00022789069,0.00010008843,0.00060805416,0.000025379437,0.00004614724,0.000035209345,0.00022588516,0.0000015021161],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":true,"about_ca_system_consensus":true,"study_design_scores_codex":[0.00021011427,0.00070569204,0.98920006,0.0011712877,0.00017036602,0.000057078156,0.0003497624,0.0010288832,0.0000030969434,0.00008458066,0.006416175,0.0006028953],"study_design_scores_gemma":[0.0025811607,0.00036688452,0.99180347,0.00018472232,0.000336143,0.0000030812955,0.0005730622,0.000101906386,0.0000062423023,0.0000709899,0.0038122707,0.00016004314],"about_ca_topic_score_codex":0.99870443,"about_ca_topic_score_gemma":0.9983991,"teacher_disagreement_score":0.013831282,"about_ca_system_score_codex":0.0064426675,"about_ca_system_score_gemma":0.02027395,"threshold_uncertainty_score":0.99737144},"labels":[],"label_agreement":null},{"id":"W4408543918","doi":"10.3201/eid3104.231435","title":"Increased Recognition of Human Anaplasmosis, Ontario, Canada, 2021","year":2025,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Viral Infections and Vectors","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Anaplasmosis; Anaplasma phagocytophilum; Tick-borne disease; Virology; Medicine; Biology; Environmental health; Geography; Immunology","score_opus":0.009490775752100554,"score_gpt":0.2613424594094573,"score_spread":0.2518516836573567,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4408543918","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9795826,0.00015439978,0.000037984013,0.00012790774,0.00039994143,0.00021345734,0.000043043477,0.00006554849,0.019375088],"genre_scores_gemma":[0.99806905,0.000019110103,0.000011287792,0.00030630996,0.00007502827,0.00003490503,0.00018128021,0.000011874861,0.0012911307],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99913406,0.000040303676,0.00028083782,0.00020586181,0.00015613409,0.00018277655],"domain_scores_gemma":[0.99936503,0.000043683387,0.00008751549,0.00021681184,0.00016628669,0.00012064375],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.000052384577,0.00014155368,0.0002756434,0.00024239601,0.00020988644,0.000012880285,0.000037112157,0.00004929504,0.0022497135],"category_scores_gemma":[0.00011598107,0.00014117049,0.00012901815,0.00044583232,0.000045530527,0.00006512818,0.000025981437,0.00013764002,0.0000056903987],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000044229568,0.00038603097,0.97069037,0.00012398604,0.00023546604,0.000014714968,0.000035911435,0.000019682644,0.0014813754,0.00013661635,0.023594746,0.0032368586],"study_design_scores_gemma":[0.0015202061,0.0002890525,0.9821881,0.00038542112,0.0005930346,0.000010030767,0.00008141975,0.00004586504,0.0042013414,0.000370127,0.010121598,0.00019381984],"about_ca_topic_score_codex":0.9625606,"about_ca_topic_score_gemma":0.96856725,"teacher_disagreement_score":0.018486444,"about_ca_system_score_codex":0.00048739678,"about_ca_system_score_gemma":0.0011224644,"threshold_uncertainty_score":0.99866235},"labels":[],"label_agreement":null},{"id":"W4409734383","doi":"10.3201/eid3105.241690","title":"Clade Ia Monkeypox Virus Linked to Sexual Transmission, Democratic Republic of the Congo, August 2024","year":2025,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Poxvirus research and outbreaks","field":"Immunology and Microbiology","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institute of Allergy and Infectious Diseases; Canadian Institutes of Health Research; International Development Research Centre; National Institutes of Health; Centers for Disease Control and Prevention; Fonds Wetenschappelijk Onderzoek; Vlaamse regering; Agence Française de Développement; U.S. Department of Defense; European Commission; European and Developing Countries Clinical Trials Partnership; Institut de Recherche pour le Développement; U.S. Department of Agriculture; HORIZON EUROPE Framework Programme; Wellcome Trust","keywords":"Monkeypox; Clade; Outbreak; Transmission (telecommunications); Democracy; Virology; Capital city; Sexual transmission; Human immunodeficiency virus (HIV); Medicine; Demography; Biology; Geography; Political science","score_opus":0.009183547687764037,"score_gpt":0.2822449002811045,"score_spread":0.27306135259334047,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4409734383","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.981065,0.004721485,0.0007742221,0.0016078366,0.0014676111,0.0006759278,0.00016038828,0.00022897316,0.009298577],"genre_scores_gemma":[0.96268654,0.000084594496,0.000007750154,0.00081168493,0.000042929398,0.00007851289,0.000030556326,0.000018178753,0.036239225],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9983483,0.00033861294,0.00038366043,0.00035597465,0.0000883057,0.0004851332],"domain_scores_gemma":[0.99895036,0.0002333607,0.00008427905,0.00050164084,0.00013202315,0.000098349905],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00012542648,0.00021018271,0.0003113591,0.0002723996,0.00043363118,0.000030565097,0.00039499032,0.00016315252,0.0016347127],"category_scores_gemma":[0.00062602555,0.00015318338,0.00017647858,0.0007405286,0.00023961918,0.00008859071,0.0001801981,0.00036501905,0.00013734742],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00037752927,0.00077462575,0.060854923,0.00027568487,0.00093997805,0.000009700321,0.0005575747,0.00026057306,0.42550054,0.0015079165,0.46008623,0.048854746],"study_design_scores_gemma":[0.003195743,0.00055273756,0.4195557,0.00036107883,0.0004476078,0.000029201236,0.0003187792,0.00008803977,0.04451095,0.002650549,0.52769005,0.00059955625],"about_ca_topic_score_codex":0.000845439,"about_ca_topic_score_gemma":0.00017235952,"teacher_disagreement_score":0.38098958,"about_ca_system_score_codex":0.00006438467,"about_ca_system_score_gemma":0.00035754815,"threshold_uncertainty_score":0.99927795},"labels":[],"label_agreement":null},{"id":"W4410816637","doi":"10.3201/eid3106.241862","title":"Highly Pathogenic Avian Influenza A(H5N1) in Wild Birds and a Human, British Columbia, Canada, 2024","year":2025,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Influenza Virus Research Studies","field":"Medicine","cited_by":13,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Influenza A virus subtype H5N1; Reassortment; Clade; Lineage (genetic); Highly pathogenic; Virology; Genotype; Biology; Zoology; Gene; Virus; Phylogenetics; Genetics; Coronavirus disease 2019 (COVID-19); Infectious disease (medical specialty); Medicine","score_opus":0.01359820736007467,"score_gpt":0.30512618805999225,"score_spread":0.2915279806999176,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4410816637","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9852127,0.007896521,0.000002768745,0.0003115962,0.00030339582,0.00061410136,0.00013651735,0.0001688541,0.005353565],"genre_scores_gemma":[0.99137586,0.00033654337,0.000008838047,0.0024607826,0.00012014276,0.00019274364,0.000015713935,0.000035784302,0.005453603],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99793327,0.00009580064,0.00043662393,0.0004960588,0.00042853487,0.0006097],"domain_scores_gemma":[0.99903727,0.00012711399,0.00006474887,0.00032245697,0.00018566464,0.00026275017],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0001557211,0.00020314769,0.00047749034,0.00027399434,0.00049625925,0.00019946128,0.0001026325,0.00008118574,0.0002436365],"category_scores_gemma":[0.0006027082,0.00029566226,0.00009618045,0.0008201946,0.00020053655,0.0001225372,0.0002136495,0.0003658293,0.0000071275063],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00002823847,0.00018480625,0.9561403,0.00039559783,0.0001978726,0.00040999887,0.00006414378,0.00001758318,0.00018821679,0.000049141527,0.037186436,0.0051376703],"study_design_scores_gemma":[0.0022829003,0.00011236206,0.95683,0.0006292711,0.00015275089,0.00003394578,0.00012254564,0.00002838236,0.0000125574825,0.00036250398,0.039183207,0.00024957367],"about_ca_topic_score_codex":0.9397157,"about_ca_topic_score_gemma":0.985199,"teacher_disagreement_score":0.04548329,"about_ca_system_score_codex":0.00057267724,"about_ca_system_score_gemma":0.001043593,"threshold_uncertainty_score":0.9999496},"labels":[],"label_agreement":null},{"id":"W4411604221","doi":"10.3201/eid3107.241009","title":"Multisystemic Disease and Septicemia Caused by Presumptive <i>Burkholderia pseudomallei</i> in American Quarter Horse, Florida, USA","year":2025,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Burkholderia infections and melioidosis","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Burkholderia pseudomallei; Quarter (Canadian coin); Melioidosis; Microbiology; Horse; Medicine; Biology; Virology; Bacteria; Geography; Genetics","score_opus":0.005224048935366786,"score_gpt":0.2634687175226172,"score_spread":0.2582446685872504,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4411604221","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.993299,0.0017670272,0.00040556974,0.00069486425,0.00069106417,0.0010060435,0.000112418944,0.00027571237,0.0017482635],"genre_scores_gemma":[0.99677795,0.000558355,0.000028710465,0.0007911804,0.0001789384,0.0005146526,0.00006991909,0.000044855766,0.0010354577],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9979593,0.00013743734,0.00048556805,0.0006803141,0.00022999544,0.0005073404],"domain_scores_gemma":[0.9986202,0.00015348045,0.00014940329,0.0004730674,0.00013759261,0.00046626365],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00011634542,0.0003899554,0.00060300034,0.0005093452,0.00023423578,0.00008542506,0.00008292643,0.00008599252,0.00013372698],"category_scores_gemma":[0.0002604372,0.00038229433,0.00015881337,0.0010484771,0.0002454354,0.00021404502,0.0000782368,0.0002771606,0.000030509105],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002437637,0.00059477164,0.9638685,0.00043745618,0.00029158563,0.0000647884,0.00025122284,0.00008511882,0.005236308,0.00010617019,0.026585598,0.0022346997],"study_design_scores_gemma":[0.0049387566,0.0002928636,0.981804,0.0007899226,0.0009437715,0.00001785942,0.00053127576,0.0011392622,0.00039325975,0.000056236666,0.008612796,0.00048001044],"about_ca_topic_score_codex":0.0015544356,"about_ca_topic_score_gemma":0.000360902,"teacher_disagreement_score":0.017972803,"about_ca_system_score_codex":0.00022969909,"about_ca_system_score_gemma":0.00021428718,"threshold_uncertainty_score":0.9998629},"labels":[],"label_agreement":null},{"id":"W4414624939","doi":"10.3201/eid3110.241803","title":"Reptile Exposure in Human Salmonellosis Cases and <i>Salmonella</i> Serotypes Isolated from Reptiles, Ontario, Canada, 2015–2022","year":2025,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Salmonella and Campylobacter epidemiology","field":"Agricultural and Biological Sciences","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Salmonella; Serotype; Salmonella enterica; Outbreak; Transmission (telecommunications); Biovar","score_opus":0.007728140395577008,"score_gpt":0.22412993528811323,"score_spread":0.21640179489253622,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4414624939","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99413514,0.0033707742,0.0000011311671,0.00056158326,0.00036645154,0.0002312058,0.00014773778,0.00014761231,0.0010383338],"genre_scores_gemma":[0.99730325,0.00017179096,0.000003537562,0.0008712243,0.00013124518,0.000054449818,0.000308132,0.0000032677397,0.0011530794],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99802965,0.00022897265,0.0004755957,0.00067212124,0.00015149603,0.0004421734],"domain_scores_gemma":[0.9988019,0.0006682673,0.00014367064,0.00016140976,0.000057571004,0.000167206],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00013108044,0.00029480495,0.00045268633,0.00004901813,0.00036557432,0.0000582864,0.00019122112,0.00014789299,0.0010357056],"category_scores_gemma":[0.000171148,0.00016379039,0.0000984851,0.00043979255,0.000077775316,0.00011236734,0.00014672124,0.00024517262,0.0000041695334],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000050932675,0.00012397477,0.9703062,0.000010157895,0.000058476176,0.000111702204,0.00008907431,0.000040405404,0.009777418,0.00003720363,0.016916128,0.0024783332],"study_design_scores_gemma":[0.00029785206,0.00015578521,0.986189,0.00007326882,0.00007045041,0.000015792733,0.00028174574,0.000034804576,0.00022246217,0.0008133315,0.011528051,0.00031741915],"about_ca_topic_score_codex":0.96782273,"about_ca_topic_score_gemma":0.99044234,"teacher_disagreement_score":0.022619577,"about_ca_system_score_codex":0.00023982227,"about_ca_system_score_gemma":0.000109841596,"threshold_uncertainty_score":0.9998775},"labels":[],"label_agreement":null},{"id":"W4417297580","doi":"10.3201/eid3111.251203","title":"Novel Dolphin Tupavirus from Stranded Atlantic White-Sided Dolphin with Severe Encephalitis, Canada, 2024","year":2025,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Marine animal studies overview","field":"Environmental Science","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Bottlenose dolphin; Marine mammal; Encephalitis; Cetacea; In situ hybridization; Ciguatera; Phylogenetics","score_opus":0.006208927495146975,"score_gpt":0.21636925255465037,"score_spread":0.21016032505950338,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4417297580","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9545892,0.0004813419,0.00038117892,0.00073664234,0.0005094856,0.00043893213,0.00023605171,0.00019039756,0.042436775],"genre_scores_gemma":[0.9959118,0.00014035714,0.000101304344,0.0011502696,0.0000823609,0.00006381002,0.000055795612,0.000025003232,0.002469309],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9979931,0.00005686413,0.00032407956,0.00063076295,0.00050471915,0.0004904646],"domain_scores_gemma":[0.99912184,0.00017236802,0.00011146838,0.000379006,0.000021377287,0.00019393375],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00006431567,0.0003505953,0.00036964047,0.000048723494,0.0003952221,0.00007640856,0.00029223374,0.000049439288,0.0074447626],"category_scores_gemma":[0.00012103582,0.0003069479,0.000092695984,0.00060664996,0.00013990838,0.00020103432,0.0003614244,0.0001921593,0.00006358741],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00005334226,0.00015790916,0.95045304,0.000050137347,0.0001605622,0.00005063927,0.000081363534,0.002004123,0.000120668235,0.00006852918,0.04414021,0.0026594943],"study_design_scores_gemma":[0.0011030581,0.000055370434,0.97202903,0.00017257125,0.00022441596,0.000010070366,0.0001494095,0.0002205843,0.00004190762,0.00033314218,0.025205104,0.00045535268],"about_ca_topic_score_codex":0.92245275,"about_ca_topic_score_gemma":0.96312314,"teacher_disagreement_score":0.041322596,"about_ca_system_score_codex":0.0005179006,"about_ca_system_score_gemma":0.0001825665,"threshold_uncertainty_score":0.99993825},"labels":[],"label_agreement":null},{"id":"W7119105343","doi":"10.3201/eid3112.250872","title":"Macrolide Resistance and P1 Cytadhesin Genotyping of <i>Mycoplasma pneumoniae</i> during Outbreak, Canada, 2024–2025","year":2025,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Pneumonia and Respiratory Infections","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Genotyping; Genotype; Mycoplasma pneumoniae; Molecular epidemiology; Outbreak; Macrolide Antibiotics; Drug resistance","score_opus":0.0035738131717393067,"score_gpt":0.23388813021760613,"score_spread":0.23031431704586683,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7119105343","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98339236,0.0023050602,0.000060322975,0.00096517056,0.0006971708,0.000303338,0.00007318697,0.00015052024,0.012052848],"genre_scores_gemma":[0.99253535,0.00027583766,0.00000993571,0.0007044548,0.00010234933,0.00004464845,0.000007350442,0.000025866831,0.006294205],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99856615,0.00006115209,0.00041707902,0.00036926536,0.0002276343,0.00035873865],"domain_scores_gemma":[0.99906987,0.00012638519,0.00013281914,0.0003413511,0.00012748277,0.0002020921],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000070548456,0.00024222382,0.00042720945,0.00029168942,0.00041531186,0.000027210714,0.000072130715,0.00007539513,0.00006088248],"category_scores_gemma":[0.00021374706,0.00024144922,0.0001223276,0.00054722617,0.00011591181,0.00008591886,0.00008199685,0.00021237292,0.000003410658],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000070889604,0.00015101445,0.9563118,0.0011791227,0.00028222977,0.000110017536,0.00008384016,0.00018801208,0.036672454,0.00035513414,0.0039451476,0.0006503288],"study_design_scores_gemma":[0.002793349,0.00009857814,0.9070183,0.0015377313,0.00092728325,0.00020008888,0.00024742095,0.00012152012,0.00859694,0.00034681056,0.07756693,0.0005450708],"about_ca_topic_score_codex":0.019724179,"about_ca_topic_score_gemma":0.11266842,"teacher_disagreement_score":0.09294424,"about_ca_system_score_codex":0.00025009917,"about_ca_system_score_gemma":0.0008158897,"threshold_uncertainty_score":0.9868036},"labels":[],"label_agreement":null}]}