{"meta":{"query_hash":"b0616fb003f1","filters":{"venue":"Eukaryotic Cell"},"cohort_total":156,"direct_labels_cover":1,"predictions_cover":156,"exported":156,"export_cap":100000,"truncated":false,"label_status":"direct model label, unvalidated","prediction_status":"machine_predicted_unvalidated (Codex and Gemma teacher distillation)","score_status":"score_only:v0-immature-baseline","snapshot":{"source":"OpenAlex, pinned release, all 482 partitions","release":"2026-06-24","frame_built":"2026-07-12"},"permalink":"https://metacan.xera.ac/q/b0616fb003f1","api":"https://metacan.xera.ac/api/v1/cohort?venue=Eukaryotic+Cell"},"results":[{"id":"W1947327007","doi":"10.1128/ec.00068-15","title":"Developmental Coordination of Gamete Differentiation with Programmed Cell Death in Sporulating Yeast","year":2015,"lang":"en","type":"article","venue":"Eukaryotic Cell","topic":"Fungal and yeast genetics research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":37,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research","keywords":"Biology; Meiosis; Gamete; Cell biology; Gametogenesis; Saccharomyces cerevisiae; Cytoplasm; Programmed cell death; Vacuole; Context (archaeology); Genetics; Meiosis II; Mitochondrion; Yeast; Apoptosis; Gene; Sperm","score_opus":0.021352561238742684,"score_gpt":0.24411025306830622,"score_spread":0.22275769182956354,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1947327007","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9941727,0.0001183843,0.00070041534,0.000016088825,0.000030208406,0.00022164099,0.000004165239,0.0000046864893,0.0047317194],"genre_scores_gemma":[0.9943911,0.0000072380403,0.0045420798,0.000009589204,0.00003363522,0.000013133337,0.000121654775,0.000014912257,0.00086667464],"study_design_codex":"observational","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9991731,0.000042291947,0.00017169221,0.00020097925,0.00021784594,0.00019410091],"domain_scores_gemma":[0.99964535,0.0000059157715,0.00006945699,0.00009250407,0.000104898834,0.000081884675],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00016541246,0.00009892949,0.00010184603,0.00006288484,0.00001741943,0.000012498928,0.00009690581,0.0000613049,0.000010199865],"category_scores_gemma":[0.000023970804,0.00008567665,0.00002349795,0.00013350561,0.00002894758,0.000003519821,0.00007184659,0.00006551336,0.000008033218],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014831075,0.000270984,0.5697612,0.00006888958,0.0000094592815,0.00000460274,0.0001644296,0.00041101896,0.42740196,0.000008140347,0.00008144966,0.0016695173],"study_design_scores_gemma":[0.0015363145,0.00044318946,0.31528446,0.000022191874,0.000008039973,0.000004920286,0.00027597861,0.0014085666,0.6807405,0.000028937075,0.000097857606,0.00014904504],"about_ca_topic_score_codex":0.000036126017,"about_ca_topic_score_gemma":0.00004550319,"teacher_disagreement_score":0.2544768,"about_ca_system_score_codex":0.000032115484,"about_ca_system_score_gemma":0.00014245497,"threshold_uncertainty_score":0.34937924},"labels":[],"label_agreement":null},{"id":"W1978257350","doi":"10.1128/ec.00292-13","title":"Modeling the Transcriptional Regulatory Network That Controls the Early Hypoxic Response in Candida albicans","year":2014,"lang":"en","type":"article","venue":"Eukaryotic Cell","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":68,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Concordia University; Université Laval; National Research Council Canada; Centre hospitalier de l'Université Laval","funders":"Canadian Institutes of Health Research","keywords":"Biology; Candida albicans; Regulation of gene expression; Cell biology; Transcriptional regulation; Computational biology; Transcription factor; Microbiology; Genetics; Gene","score_opus":0.018030550839709766,"score_gpt":0.23155114348231,"score_spread":0.21352059264260026,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1978257350","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9892367,0.0012403314,0.003248808,0.0029261336,0.00019167237,0.00049692806,0.000003859718,0.000030020607,0.0026255145],"genre_scores_gemma":[0.99468493,0.000035076704,0.0000767107,0.0017550908,0.00028913718,0.000022070712,0.0000049122405,0.000021420368,0.0031106458],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99808747,0.00047797948,0.00030720365,0.00029329152,0.00042459002,0.0004094905],"domain_scores_gemma":[0.99849856,0.0006820964,0.00004896424,0.00062070496,0.000047707323,0.0001019806],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00224877,0.00016708713,0.000287869,0.00003449573,0.00020731795,0.000029590858,0.00020665725,0.000090819565,0.00016661905],"category_scores_gemma":[0.00013890749,0.000093880815,0.00016239262,0.00017363037,0.00018990942,0.00005814796,0.00002078337,0.0004133262,0.000039711816],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.013095278,0.00029987836,0.9360448,0.000093421244,0.00007864924,0.00004818491,0.0028638763,0.034958947,0.0071077133,0.0022835608,0.0018202639,0.0013054068],"study_design_scores_gemma":[0.0013718094,0.00017034626,0.9487249,0.000071999304,0.000063558684,0.0000064692927,0.00028965867,0.047700286,0.00005866354,0.00075896765,0.0006721415,0.000111198184],"about_ca_topic_score_codex":0.0002414169,"about_ca_topic_score_gemma":0.00051404204,"teacher_disagreement_score":0.012741338,"about_ca_system_score_codex":0.00009748855,"about_ca_system_score_gemma":0.00017761863,"threshold_uncertainty_score":0.38283485},"labels":[],"label_agreement":null},{"id":"W1978545939","doi":"10.1128/ec.00214-13","title":"Protein Kinase A Is Part of a Mechanism That Regulates Nuclear Reimport of the Nuclear tRNA Export Receptors Los1p and Msn5p","year":2013,"lang":"en","type":"article","venue":"Eukaryotic Cell","topic":"RNA modifications and cancer","field":"Biochemistry, Genetics and Molecular Biology","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"Canadian Institutes of Health Research","keywords":"Nuclear export signal; Biology; Transfer RNA; Nuclear transport; Biochemistry; Cell biology; Signal transduction; Protein kinase A; Receptor; Nuclear protein; Cell nucleus; Kinase; Cytoplasm; RNA; Gene; Transcription factor","score_opus":0.009042336743661597,"score_gpt":0.1889223995540841,"score_spread":0.17988006281042251,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1978545939","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9971862,0.00033160538,0.000010309596,0.00028944487,0.000083091145,0.00042288864,0.000010121972,0.0000062536633,0.0016601112],"genre_scores_gemma":[0.9958475,0.0002073639,0.00044553206,0.00011979127,0.000041949716,0.000015482414,0.0000072229614,0.00002760171,0.003287514],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9991976,0.000034692282,0.00023293654,0.0002518558,0.00013739032,0.00014551343],"domain_scores_gemma":[0.99913126,0.0000035990759,0.00020185192,0.00053604785,0.00006804577,0.00005922129],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00010895794,0.00012208201,0.00014809372,0.000021366186,0.000059751168,0.000012951055,0.0001927376,0.0001058484,0.0005221446],"category_scores_gemma":[0.000013247833,0.00009158385,0.000093070696,0.00006878245,0.00013369204,0.000006793525,0.00011663285,0.00006456693,0.000011501254],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00003147812,0.00012776886,0.002352599,0.000082327984,0.000037436173,6.284931e-7,0.00039505653,0.0000020249188,0.9875105,0.00050940004,0.007763346,0.0011874218],"study_design_scores_gemma":[0.0003942304,0.00023093072,0.01731947,0.000057006604,0.0000328135,0.000006037888,0.00061868096,0.00008378546,0.9697231,0.00057198387,0.010792226,0.00016970448],"about_ca_topic_score_codex":0.00009580357,"about_ca_topic_score_gemma":0.0000023289283,"teacher_disagreement_score":0.017787382,"about_ca_system_score_codex":0.000007983857,"about_ca_system_score_gemma":0.000038945833,"threshold_uncertainty_score":0.5717117},"labels":[],"label_agreement":null},{"id":"W2007018829","doi":"10.1128/ec.05130-11","title":"The Polo-Like Kinase PLKA in Aspergillus nidulans Is Not Essential but Plays Important Roles during Vegetative Growth and Development","year":2011,"lang":"en","type":"article","venue":"Eukaryotic Cell","topic":"Microtubule and mitosis dynamics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":10,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Concordia University","funders":"","keywords":"Biology; Aspergillus nidulans; Polo-like kinase; Cell biology; Conidiation; PLK1; Morphogenesis; Hypha; Mitosis; Cell cycle; Genetics; Botany; Cell; Mutant; Gene","score_opus":0.007139874874058974,"score_gpt":0.19476343905384222,"score_spread":0.18762356417978324,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2007018829","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99749786,0.0011727235,0.000101626385,0.000042161504,0.000117352276,0.00017820869,0.000015063038,0.000007914636,0.000867069],"genre_scores_gemma":[0.9975986,0.0010141756,0.00062365737,0.0001692541,0.000060319104,0.00001751305,0.00003425503,0.00002372024,0.00045851176],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99885637,0.00004055594,0.000301423,0.0003624629,0.00010390795,0.0003352908],"domain_scores_gemma":[0.999556,0.000013155126,0.00009477516,0.00022203912,0.000030040079,0.000084014755],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00011870914,0.0001977685,0.00014451773,0.00004077355,0.00016505964,0.00002343634,0.00018474553,0.00011584115,0.000016652722],"category_scores_gemma":[0.000013932667,0.00015853884,0.00004702281,0.000047958794,0.00010608313,0.000004987383,0.00018742266,0.000119033546,0.000009336083],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003063845,0.00021507205,0.10413077,0.000089980225,0.0001006957,0.00010464099,0.0036909159,0.000005827161,0.8907789,0.00009827318,0.00012288753,0.00035566685],"study_design_scores_gemma":[0.00070853217,0.000073525815,0.1313276,0.000015266689,0.000015662243,0.000019033827,0.00049079367,0.000050928316,0.86685276,0.000021617776,0.00019826964,0.00022602886],"about_ca_topic_score_codex":0.00013168188,"about_ca_topic_score_gemma":0.00059177063,"teacher_disagreement_score":0.027196825,"about_ca_system_score_codex":0.00001859295,"about_ca_system_score_gemma":0.00009456232,"threshold_uncertainty_score":0.6465026},"labels":[],"label_agreement":null},{"id":"W2007665576","doi":"10.1128/ec.3.6.1464-1475.2004","title":"Morphogenetic Pathway of Spore Wall Assembly in <i>Saccharomyces cerevisiae</i>","year":2004,"lang":"en","type":"article","venue":"Eukaryotic Cell","topic":"Fungal and yeast genetics research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":117,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institute of General Medical Sciences; University of Toronto; Oklahoma Center for the Advancement of Science and Technology","keywords":"Saccharomyces cerevisiae; Spore; Biology; Mutant; Cell biology; Extracellular; Extracellular matrix; Microbiology; Biochemistry; Gene","score_opus":0.008876137701270879,"score_gpt":0.23000791402592533,"score_spread":0.22113177632465444,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2007665576","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99043626,0.0031497024,0.00009316249,0.000121249876,0.00008248553,0.00022071924,0.00001795714,0.000006652312,0.005871802],"genre_scores_gemma":[0.9973318,0.0005870873,0.00090080017,0.00010683767,0.00009109508,0.000012243557,0.00006464461,0.000029398943,0.0008761241],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.998617,0.000046842044,0.00031831264,0.0003857077,0.0002590005,0.0003731619],"domain_scores_gemma":[0.99929905,0.000011812186,0.000077208475,0.00041760094,0.00007429406,0.000120059725],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00019193621,0.00018323556,0.00021349627,0.00008355422,0.000028107534,0.000014312953,0.00034095312,0.00014156799,0.00006515319],"category_scores_gemma":[0.0000257936,0.00017251539,0.000109380235,0.00020223162,0.00007796903,0.0000029598991,0.00015819423,0.00013209286,0.000060294853],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000631698,0.0002975985,0.029197317,0.00012381005,0.000013874685,0.00003350333,0.000054409593,0.0018856766,0.96722364,0.00007169408,0.00014977975,0.0008855184],"study_design_scores_gemma":[0.0011272484,0.00041196315,0.041701715,0.00004585248,0.0000073426,0.000014571545,0.00004987562,0.000035977755,0.95503324,0.00021657137,0.0011454067,0.00021022123],"about_ca_topic_score_codex":0.000101061734,"about_ca_topic_score_gemma":0.000061897015,"teacher_disagreement_score":0.012504398,"about_ca_system_score_codex":0.000023211738,"about_ca_system_score_gemma":0.00020793013,"threshold_uncertainty_score":0.7034973},"labels":[],"label_agreement":null},{"id":"W2009237120","doi":"10.1128/ec.00238-14","title":"The ADP/ATP Carrier and Its Relationship to Oxidative Phosphorylation in Ancestral Protist Trypanosoma brucei","year":2015,"lang":"en","type":"article","venue":"Eukaryotic Cell","topic":"Trypanosoma species research and implications","field":"Medicine","cited_by":25,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canadian Institute for Advanced Research","funders":"","keywords":"Trypanosoma brucei; Biology; Oxidative phosphorylation; Protist; Phosphorylation; Cell biology; Biochemistry; Adenosine triphosphate; Gene","score_opus":0.05645221583440546,"score_gpt":0.3197054180891013,"score_spread":0.26325320225469584,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2009237120","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9776178,0.0010699608,0.00007667743,0.0065278257,0.00009650698,0.0014235763,0.000029249262,0.000036058806,0.013122367],"genre_scores_gemma":[0.99205446,0.000042077587,0.00043040322,0.00016013277,0.0001054507,0.00014136688,0.00003259061,0.000015005861,0.0070185233],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99870914,0.000075056836,0.00026098112,0.00027018765,0.00034409252,0.00034054817],"domain_scores_gemma":[0.99882984,0.00021567085,0.00005390198,0.00029267016,0.00018041454,0.0004275297],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000064840155,0.00012547101,0.00015605679,0.00009989041,0.00016905073,0.00005964858,0.0001159773,0.00006830172,0.000043456108],"category_scores_gemma":[0.00083483104,0.00009493621,0.000030439693,0.0005007971,0.00008625036,0.00014866365,0.000060038026,0.00028004046,0.00019363928],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0008488726,0.0003847011,0.9395697,0.00010852349,0.00003624829,0.000054641925,0.0053713936,0.00009494212,0.017413689,0.006086003,0.024003262,0.0060280026],"study_design_scores_gemma":[0.0011201762,0.000307348,0.9842908,0.000034165463,0.0000120474915,0.0000223479,0.00063563813,0.00032451117,0.0045022382,0.00040846414,0.008238538,0.00010375485],"about_ca_topic_score_codex":0.00008998392,"about_ca_topic_score_gemma":0.0001830528,"teacher_disagreement_score":0.04472105,"about_ca_system_score_codex":0.0001729948,"about_ca_system_score_gemma":0.00029933098,"threshold_uncertainty_score":0.38713863},"labels":[],"label_agreement":null},{"id":"W2021319680","doi":"10.1128/ec.00273-13","title":"Role of the Apt1 Protein in Polysaccharide Secretion by Cryptococcus neoformans","year":2013,"lang":"en","type":"article","venue":"Eukaryotic Cell","topic":"Fungal Infections and Studies","field":"Medicine","cited_by":79,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canada's Michael Smith Genome Sciences Centre; University of British Columbia","funders":"National Institute on Minority Health and Health Disparities; Canadian Institutes of Health Research","keywords":"Secretion; Cryptococcus neoformans; Biology; Mutant; Microbiology; Cell biology; Virulence; Extracellular; Intracellular; Polysaccharide; Phenotype; Biochemistry; Gene","score_opus":0.004255811614464891,"score_gpt":0.19601569904266497,"score_spread":0.19175988742820008,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2021319680","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.978137,0.00029621564,0.000028737326,0.00059172336,0.0000665713,0.00092548114,0.0000031140858,0.000017719422,0.019933406],"genre_scores_gemma":[0.9961552,0.000016789852,0.000101041296,0.00010295636,0.000036907204,0.00009889744,0.000002225074,0.0000086735645,0.0034772977],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9993913,0.000022858023,0.00019661676,0.00010462413,0.000121806115,0.00016279615],"domain_scores_gemma":[0.9996512,0.000019239798,0.000057155783,0.00019018434,0.00004532952,0.000036873997],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00007659721,0.00008440972,0.00015057942,0.000046420988,0.000052419742,0.0000070340634,0.00005634053,0.000045662167,0.00042528537],"category_scores_gemma":[0.000024969087,0.00005437111,0.000062502826,0.00018230801,0.000049835926,0.0000573255,0.000045165893,0.00015110674,0.00010299592],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000028719387,0.00043481047,0.30793115,0.00014944999,0.00002484914,0.0000017663563,0.00094252144,0.000016992264,0.6837557,0.00021979297,0.0044757626,0.002018474],"study_design_scores_gemma":[0.00096061523,0.00027167078,0.88129467,0.00014208,0.000033458546,0.000007560808,0.000840873,0.001601379,0.11295306,0.00062619755,0.001143063,0.00012538627],"about_ca_topic_score_codex":0.0012722797,"about_ca_topic_score_gemma":0.000050977484,"teacher_disagreement_score":0.5733635,"about_ca_system_score_codex":0.000041498435,"about_ca_system_score_gemma":0.000028593227,"threshold_uncertainty_score":0.46565765},"labels":[],"label_agreement":null},{"id":"W2047025254","doi":"10.1128/ec.05329-11","title":"Electrical Phenotypes of Calcium Transport Mutant Strains of a Filamentous Fungus, Neurospora crassa","year":2012,"lang":"en","type":"article","venue":"Eukaryotic Cell","topic":"Plant and Biological Electrophysiology Studies","field":"Agricultural and Biological Sciences","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"York University","funders":"","keywords":"Mutant; Neurospora crassa; Biology; Wild type; Cell biology; Extracellular; Biochemistry; Biophysics; Molecular biology; Gene","score_opus":0.020889094124918517,"score_gpt":0.20700287048601224,"score_spread":0.18611377636109372,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2047025254","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9974824,0.00075603626,0.000004107404,0.000075147866,0.00009494336,0.00014513698,0.000096589705,0.000030563086,0.0013150438],"genre_scores_gemma":[0.99928063,0.00014205255,0.0000420528,0.000107223306,0.000155048,0.0000035996575,0.00006796565,9.849894e-7,0.00020044933],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9987983,0.00006140246,0.00031613858,0.00019940679,0.000164012,0.00046075275],"domain_scores_gemma":[0.9995198,0.00014419071,0.00014774404,0.00005017987,0.000042346554,0.000095715666],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013097428,0.00016631435,0.00037575097,0.000012225972,0.00006636756,0.0000023382215,0.00019882989,0.00011391577,0.00027342766],"category_scores_gemma":[0.000023046745,0.000060103648,0.00014796443,0.00027313948,0.00014583909,0.00004298094,0.000034345027,0.00014131848,0.000011251765],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007338437,0.0004739361,0.094857305,0.000012500861,0.000019056779,0.000004798655,0.000048120168,0.0000015825276,0.9023578,0.00016246436,0.00017126913,0.0018177447],"study_design_scores_gemma":[0.000121722514,0.0008400576,0.9043598,0.0000054865995,0.00003696293,0.0000044109884,0.00004560387,0.00001676712,0.09407546,0.00007484431,0.00028702166,0.00013187187],"about_ca_topic_score_codex":0.000119275806,"about_ca_topic_score_gemma":0.000035822628,"teacher_disagreement_score":0.8095025,"about_ca_system_score_codex":0.000010946128,"about_ca_system_score_gemma":0.000008837651,"threshold_uncertainty_score":0.29938412},"labels":[],"label_agreement":null},{"id":"W2049802119","doi":"10.1128/ec.00320-13","title":"Ste18p Is a Positive Control Element in the Mating Process of Candida albicans","year":2014,"lang":"en","type":"article","venue":"Eukaryotic Cell","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Concordia University","funders":"Canadian Institutes of Health Research","keywords":"Heterotrimeric G protein; Biology; Protein subunit; Gene; Candida albicans; Genetics; Cell biology; Ectopic expression; G protein; Signal transduction","score_opus":0.006579010004342584,"score_gpt":0.25854570999046944,"score_spread":0.25196669998612686,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2049802119","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97527146,0.00009792768,0.0007668431,0.0010175165,0.000024340767,0.00050225895,0.000011409209,0.000007507716,0.022300707],"genre_scores_gemma":[0.9976907,0.000005400664,0.00008273531,0.0016318897,0.00004527522,0.000012842369,0.0000060786456,0.000007806588,0.00051729986],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9989739,0.00006909275,0.000284591,0.00017677963,0.0002938416,0.00020180675],"domain_scores_gemma":[0.9993181,0.00021304948,0.000094566065,0.00025101166,0.00007757103,0.000045665267],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005667124,0.00009693131,0.00025771707,0.00003401231,0.0000369974,0.00000703722,0.000101443315,0.000035841713,0.00021228619],"category_scores_gemma":[0.000095516996,0.00006279024,0.0000632151,0.00013799283,0.00006277202,0.000027781529,0.000009958512,0.00014617553,0.00001381169],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00026505283,0.00036562787,0.98841304,0.00044369645,0.000023285043,0.00001470182,0.0067907404,0.000015771393,0.0014302218,0.00021452022,0.00042933386,0.0015940384],"study_design_scores_gemma":[0.0021839745,0.0004355866,0.9861397,0.00016012909,0.00008472977,0.0000037125833,0.0039944816,0.0022249203,0.004411166,0.00021038574,0.000061690946,0.00008953391],"about_ca_topic_score_codex":0.0002869542,"about_ca_topic_score_gemma":0.00022855264,"teacher_disagreement_score":0.022419183,"about_ca_system_score_codex":0.00004138509,"about_ca_system_score_gemma":0.00008406169,"threshold_uncertainty_score":0.25605115},"labels":[],"label_agreement":null},{"id":"W2063562830","doi":"10.1128/ec.00249-12","title":"Identification of the Mating-Type (<i>MAT</i>) Locus That Controls Sexual Reproduction of Blastomyces dermatitidis","year":2012,"lang":"en","type":"article","venue":"Eukaryotic Cell","topic":"Fungal Infections and Studies","field":"Medicine","cited_by":41,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"National Institute of Allergy and Infectious Diseases","keywords":"Biology; Mating type; Blastomyces; Locus (genetics); Sexual reproduction; Mating; Reproduction; Blastomyces dermatitidis; Identification (biology); Genetics; Gene; Blastomycosis; Botany; Immunology","score_opus":0.019614599306108624,"score_gpt":0.2534565530689081,"score_spread":0.23384195376279945,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2063562830","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99412304,0.0015625966,0.00016336048,0.00037681297,0.0007839359,0.00030718918,0.000005592886,0.000022427044,0.0026550556],"genre_scores_gemma":[0.9974923,0.000047718197,0.00010145089,0.000036634232,0.00015830268,0.0000070696387,0.0000037772882,0.000009571517,0.0021431355],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9991611,0.000051591403,0.00033180442,0.00012251975,0.00020022377,0.00013276485],"domain_scores_gemma":[0.9990742,0.00007436146,0.0002786859,0.00038681622,0.00015320496,0.000032716725],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000334875,0.00008555455,0.00021366855,0.000047911442,0.00008199459,0.0000054375514,0.000052268562,0.000038161437,0.00005385066],"category_scores_gemma":[0.0001838265,0.00005765022,0.0000623519,0.00020206213,0.00010570828,0.000098681245,0.000036636997,0.000089351546,0.000029656227],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000049841205,0.0004576335,0.8286284,0.00056417123,0.000085529915,3.5790504e-7,0.0015696108,0.00007669642,0.16431543,0.00012984047,0.0033872786,0.0007351911],"study_design_scores_gemma":[0.0004075564,0.00011386222,0.6597902,0.000050868468,0.0001878753,0.000028498796,0.0009813567,0.00012027016,0.3379654,0.00003342731,0.00025789122,0.00006276924],"about_ca_topic_score_codex":0.000079816455,"about_ca_topic_score_gemma":0.0000057588454,"teacher_disagreement_score":0.17364997,"about_ca_system_score_codex":0.000025879679,"about_ca_system_score_gemma":0.000024886685,"threshold_uncertainty_score":0.23509078},"labels":[],"label_agreement":null},{"id":"W2085386673","doi":"10.1128/ec.00307-12","title":"Extremely Reduced Levels of Heterozygosity in the Vertebrate Pathogen Encephalitozoon cuniculi","year":2013,"lang":"en","type":"article","venue":"Eukaryotic Cell","topic":"Parasitic Infections and Diagnostics","field":"Immunology and Microbiology","cited_by":49,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Ottawa; Canadian Institute for Advanced Research","funders":"National Institute of Allergy and Infectious Diseases","keywords":"Biology; Loss of heterozygosity; Encephalitozoon cuniculi; Genome; Ploidy; Genetics; Evolutionary biology; Vertebrate; Lineage (genetic); Microsporidia; Gene; Microbiology; Allele","score_opus":0.020571095752585054,"score_gpt":0.233597279946981,"score_spread":0.21302618419439595,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2085386673","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9883449,0.0006926623,0.00009188196,0.000132877,0.0004937607,0.00031230316,0.00002862901,0.000017087606,0.009885894],"genre_scores_gemma":[0.99906164,0.000034559722,0.000078018624,0.00016805889,0.000021112692,0.000027332502,0.000021235459,0.0000068051036,0.0005812596],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9989503,0.00027974928,0.00028386264,0.00017831658,0.000038272767,0.00026946724],"domain_scores_gemma":[0.9991998,0.00030553236,0.000087587105,0.00033291997,0.000058695496,0.000015456817],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00025229398,0.00012492157,0.0001919431,0.0000649931,0.00008975811,0.0000127468575,0.00023388345,0.00012929385,0.0014282945],"category_scores_gemma":[0.00006699233,0.00008943099,0.00007109279,0.00016311501,0.00013649356,0.000079780286,0.00004426451,0.00019818604,0.001113817],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000022899481,0.000980118,0.15839094,0.000045575765,0.00005882035,0.0000241405,0.0022231864,0.00007158963,0.8276872,0.0010008158,0.0064593568,0.0030353444],"study_design_scores_gemma":[0.0008564123,0.00015652766,0.90677017,0.000028891483,0.00004169791,0.000047561793,0.00041794352,0.00004258072,0.09038945,0.0006298974,0.00045795937,0.0001609133],"about_ca_topic_score_codex":0.00046716133,"about_ca_topic_score_gemma":0.000028383944,"teacher_disagreement_score":0.74837923,"about_ca_system_score_codex":0.000022393267,"about_ca_system_score_gemma":0.000044639564,"threshold_uncertainty_score":0.99966395},"labels":[],"label_agreement":null},{"id":"W2094041961","doi":"10.1128/ec.05273-11","title":"Adaptation of Cryptococcus neoformans to Mammalian Hosts: Integrated Regulation of Metabolism and Virulence","year":2011,"lang":"en","type":"review","venue":"Eukaryotic Cell","topic":"Fungal Infections and Studies","field":"Medicine","cited_by":116,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"National Institute of Allergy and Infectious Diseases; Canadian Institutes of Health Research; National Institutes of Health; Natural Sciences and Engineering Research Council of Canada; Burroughs Wellcome Fund","keywords":"Cryptococcus neoformans; Biology; Virulence; Microbiology; Cryptococcosis; Adaptation (eye); Virulence factor; Cell biology; Extracellular; Yeast; Immune system; Transcription factor; Cellular adaptation; Cryptococcus; Immunology; Gene; Genetics; Neuroscience","score_opus":0.0469798637355099,"score_gpt":0.2926747390757463,"score_spread":0.24569487534023643,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2094041961","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0012876808,0.99221325,0.00066510646,0.000012563104,0.00023824428,0.0011460218,0.00004728168,0.000020888578,0.0043689655],"genre_scores_gemma":[0.00389352,0.99268574,0.0018950648,0.000012697769,0.000060127153,0.00005012952,0.00006933443,0.000026131556,0.0013072658],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9988308,0.000057085806,0.00062064175,0.00021881134,0.00012936171,0.00014330674],"domain_scores_gemma":[0.9990366,0.00006560171,0.00034186724,0.00026223232,0.00021204028,0.000081649174],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00017952816,0.00023631743,0.0011696618,0.00030390665,0.000039319897,0.000004892631,0.000061443585,0.00014135572,0.00014187052],"category_scores_gemma":[0.000063870444,0.0001742133,0.00017972339,0.00041667907,0.00007629967,0.0000552577,0.000050464416,0.00016804234,0.00002845638],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000059536742,0.00021867128,0.00042184922,0.023150185,0.00020104366,0.0000035023754,0.0012071221,0.0000073172096,0.00004649048,0.00070185534,0.0007941799,0.9731882],"study_design_scores_gemma":[0.0006433737,0.0008236157,0.024633856,0.013134408,0.0032029788,0.000036114612,0.00040855643,0.000087828026,0.00036343717,0.00006166488,0.95622456,0.00037959003],"about_ca_topic_score_codex":0.00040806437,"about_ca_topic_score_gemma":0.000033511293,"teacher_disagreement_score":0.97280866,"about_ca_system_score_codex":0.000042262975,"about_ca_system_score_gemma":0.00011069995,"threshold_uncertainty_score":0.7104212},"labels":[],"label_agreement":null},{"id":"W2095214135","doi":"10.1128/ec.05311-11","title":"Bestatin Inhibits Cell Growth, Cell Division, and Spore Cell Differentiation in Dictyostelium discoideum","year":2012,"lang":"en","type":"article","venue":"Eukaryotic Cell","topic":"Cellular Mechanics and Interactions","field":"Biochemistry, Genetics and Molecular Biology","cited_by":19,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Dictyostelium discoideum; Biology; Dictyostelium; Cell division; Cell biology; Cell growth; Cellular differentiation; Cytoplasm; Cell; Morphogenesis; Biochemistry; Gene","score_opus":0.005161204894812845,"score_gpt":0.20379517181129048,"score_spread":0.19863396691647764,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2095214135","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9872,0.0020861833,0.002187011,0.00007849825,0.00058072794,0.00029976622,0.000033427154,0.000015141114,0.007519222],"genre_scores_gemma":[0.9940338,0.0006290752,0.00033411314,0.0001369958,0.0002118953,0.000018864472,0.00050473213,0.00005409241,0.00407639],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9983354,0.000093411916,0.00040638857,0.00045917052,0.00019469496,0.00051091105],"domain_scores_gemma":[0.99914306,0.000034775083,0.00017504013,0.0003555836,0.000063685155,0.00022787215],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00021591045,0.00029904663,0.00022182906,0.00011869559,0.00011369359,0.000054012155,0.00016285958,0.00019301753,0.0001346433],"category_scores_gemma":[0.000023110766,0.00029032255,0.00010594104,0.00014355533,0.00003709582,0.000029862584,0.0002518655,0.000243573,0.000074700336],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000035197118,0.0010569269,0.09261272,0.00017918868,0.0000070490833,0.000005817736,0.00051305996,0.000019559207,0.9030236,0.000056124394,0.0022042268,0.00028651682],"study_design_scores_gemma":[0.0011176398,0.00025544874,0.051784515,0.00002772136,0.000040094626,0.0000065036706,0.00042668593,0.00039375797,0.9437003,0.000081251965,0.0017483303,0.00041773313],"about_ca_topic_score_codex":0.000090786,"about_ca_topic_score_gemma":0.000046914414,"teacher_disagreement_score":0.040828202,"about_ca_system_score_codex":0.00003183584,"about_ca_system_score_gemma":0.00003836155,"threshold_uncertainty_score":0.9999549},"labels":[],"label_agreement":null},{"id":"W2096171965","doi":"10.1128/ec.4.2.253-261.2005","title":"Multiple Metabolic Roles for the Nonphotosynthetic Plastid of the Green Alga <i>Prototheca wickerhamii</i>","year":2005,"lang":"en","type":"article","venue":"Eukaryotic Cell","topic":"Photosynthetic Processes and Mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":68,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University","funders":"Natural Sciences and Engineering Research Council of Canada; Atlantic Canada Opportunities Agency; Genome Canada","keywords":"Plastid; Apicoplast; Biology; Expressed sequence tag; Endosymbiosis; Apicomplexa; Organelle; Metabolic pathway; Plasmodium falciparum; Biochemistry; Chloroplast; Genome; Gene","score_opus":0.006119974443290838,"score_gpt":0.20354473683543683,"score_spread":0.19742476239214599,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2096171965","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97440904,0.0035132114,0.014154748,0.0013570312,0.00050163147,0.0027619593,0.0001954266,0.000031525084,0.0030754465],"genre_scores_gemma":[0.9957017,0.00022527749,0.0006930087,0.00061293197,0.0002794301,0.00023733925,0.000012430354,0.000043538254,0.0021943552],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9988016,0.000043043678,0.00028635142,0.00033451102,0.00019426312,0.0003402265],"domain_scores_gemma":[0.9988635,0.00011456835,0.00017708565,0.00069496955,0.00008341001,0.000066456196],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00024788603,0.00022294142,0.00021254281,0.000022214344,0.00018339568,0.000016497652,0.0006842372,0.00011431529,0.00004291264],"category_scores_gemma":[0.00010070948,0.00013022486,0.0002624375,0.00010029884,0.0001526937,0.0000048177653,0.0002018405,0.00010052091,0.000011612325],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014951844,0.00020918017,0.0004276021,0.00007148625,0.00006946718,2.8009757e-7,0.00016790387,0.0003784159,0.9929667,0.000120911194,0.00058258127,0.0048559466],"study_design_scores_gemma":[0.00076265057,0.000120481185,0.0006312566,0.000019027348,0.000100865785,0.000012219152,0.000092927534,0.0023540687,0.9199595,0.00011352581,0.07566874,0.00016478643],"about_ca_topic_score_codex":0.000060155984,"about_ca_topic_score_gemma":0.0001651433,"teacher_disagreement_score":0.075086154,"about_ca_system_score_codex":0.000007740027,"about_ca_system_score_gemma":0.000114272625,"threshold_uncertainty_score":0.53104156},"labels":[],"label_agreement":null},{"id":"W2096782946","doi":"10.1128/ec.00019-13","title":"Transcriptional Regulation of the Copper Transporter Mfc1 in Meiotic Cells","year":2013,"lang":"en","type":"article","venue":"Eukaryotic Cell","topic":"Trace Elements in Health","field":"Nursing","cited_by":9,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Sherbrooke","funders":"Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research; Fondation des Etoiles","keywords":"Biology; Schizosaccharomyces pombe; Transcription factor; Transcriptional regulation; Gene; Genetics; Regulation of gene expression; Promoter; Gene expression; Saccharomyces cerevisiae","score_opus":0.010822527286020688,"score_gpt":0.22272041032443124,"score_spread":0.21189788303841056,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2096782946","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9924107,0.00011086461,0.000091257185,0.0023150798,0.0014831203,0.00078152353,0.000010197901,0.00002497961,0.0027722432],"genre_scores_gemma":[0.997482,0.000003807717,0.001004452,0.0004106371,0.00006871657,0.000014229818,0.000008745399,0.000024023399,0.0009834117],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99855137,0.00011845719,0.00048323962,0.00021408654,0.00034250075,0.00029033862],"domain_scores_gemma":[0.99939287,0.00008183407,0.00011147046,0.00031744977,0.000042650758,0.000053740197],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00020780343,0.00013022535,0.00017456233,0.0000790617,0.00005455954,0.000011773149,0.00020223045,0.00008333238,0.0016671486],"category_scores_gemma":[0.0000058223377,0.00010286444,0.000090059104,0.00021775678,0.000080162754,0.0001555238,0.000007653119,0.00020867168,0.0001187596],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015134415,0.0010850711,0.6978233,0.0006880151,0.000018484538,0.0000020118125,0.0061580553,0.0045551355,0.27068284,0.0004151109,0.012420941,0.005999672],"study_design_scores_gemma":[0.0007891357,0.000058513782,0.95392865,0.00006701996,0.000021730804,0.0000011737238,0.00010360544,0.001089678,0.042916257,0.00062676705,0.00029433225,0.00010314014],"about_ca_topic_score_codex":0.00035059775,"about_ca_topic_score_gemma":0.00016956261,"teacher_disagreement_score":0.25610533,"about_ca_system_score_codex":0.000112378184,"about_ca_system_score_gemma":0.000035974022,"threshold_uncertainty_score":0.99924546},"labels":[],"label_agreement":null},{"id":"W2097049408","doi":"10.1128/ec.00386-07","title":"Genome-Wide Analysis of Sterol-Lipid Storage and Trafficking in <i>Saccharomyces cerevisiae</i>","year":2007,"lang":"en","type":"article","venue":"Eukaryotic Cell","topic":"Lipid metabolism and biosynthesis","field":"Biochemistry, Genetics and Molecular Biology","cited_by":64,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Simon Fraser University","funders":"British Columbia Knowledge Development Fund; Biomedical Research Council; National Medical Research Council","keywords":"Sterol; Biology; Lipid droplet; Saccharomyces cerevisiae; Biogenesis; Biochemistry; Mutant; Lipid metabolism; Sterol regulatory element-binding protein; Cell biology; Gene; Cholesterol","score_opus":0.006515298214438979,"score_gpt":0.21372080105055774,"score_spread":0.20720550283611877,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2097049408","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9947039,0.0032524483,0.00056624523,0.000018697438,0.00007913152,0.00010721629,0.000010938072,0.000006939338,0.0012544796],"genre_scores_gemma":[0.9985922,0.0003414839,0.00051698874,0.00014063691,0.00014008627,0.0000016578579,0.00004971008,0.000014890112,0.00020232232],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9988436,0.000048234935,0.0003661139,0.00034121334,0.00013091715,0.00026991722],"domain_scores_gemma":[0.9994069,0.00005454528,0.0001279774,0.00029447168,0.000029914208,0.00008618766],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005432863,0.00015910082,0.0003396867,0.0002318549,0.000032315507,0.00001484727,0.00016329752,0.00011336518,0.000037099937],"category_scores_gemma":[0.000035183788,0.00014548047,0.0001173627,0.0003715209,0.00005966216,0.0000056161043,0.000084909545,0.00006807905,0.0000027574165],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010288304,0.00021474191,0.52634495,0.00011186982,0.00026363748,0.000010128128,0.00041583864,0.00020529743,0.46677148,0.000005132805,0.000056903817,0.0054971175],"study_design_scores_gemma":[0.00038297538,0.000054306514,0.7908697,0.000009508042,0.00026852998,0.0000012721741,0.0001881054,0.000047983856,0.20189376,7.8677465e-7,0.0061025443,0.00018050741],"about_ca_topic_score_codex":0.000021439359,"about_ca_topic_score_gemma":0.00016802449,"teacher_disagreement_score":0.26487774,"about_ca_system_score_codex":0.000008481418,"about_ca_system_score_gemma":0.000026053456,"threshold_uncertainty_score":0.5932522},"labels":[],"label_agreement":null},{"id":"W2097079107","doi":"10.1128/ec.1.6.954-966.2002","title":"<i>ras2</i> Controls Morphogenesis, Pheromone Response, and Pathogenicity in the Fungal Pathogen <i>Ustilago maydis</i>","year":2002,"lang":"en","type":"article","venue":"Eukaryotic Cell","topic":"Fungal and yeast genetics research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":105,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"Canadian Institutes of Health Research","keywords":"Biology; Ustilago; MAP kinase kinase kinase; Protein kinase A; Mitogen-activated protein kinase kinase; c-Raf; Cell biology; Genetics; Kinase; Gene","score_opus":0.012713820569487673,"score_gpt":0.2165174014297145,"score_spread":0.20380358086022685,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2097079107","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9852421,0.010222946,0.00007206635,0.00046404815,0.0000866725,0.00043912514,0.00011464626,0.000010758083,0.003347603],"genre_scores_gemma":[0.99508685,0.0012764826,0.00020640476,0.00093339715,0.00020241439,0.000053182473,0.00004248593,0.00003321325,0.0021655518],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9977643,0.0005391151,0.00029474517,0.0005269788,0.00034486785,0.0005300203],"domain_scores_gemma":[0.99903846,0.000121678124,0.000062528874,0.0005698989,0.000057843576,0.00014961661],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008478453,0.00025313813,0.00021945922,0.000055783727,0.0001320601,0.00006428574,0.0004163473,0.00017951941,0.000113248556],"category_scores_gemma":[0.000104321196,0.00019578502,0.00010432365,0.00021074784,0.00015324829,0.000005027917,0.00019784174,0.00022603026,0.00007418957],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0004712227,0.0002812256,0.027360866,0.000027274573,0.000015869617,0.00012296929,0.00015264314,0.00006397675,0.9666896,0.000010240598,0.0035946497,0.0012094884],"study_design_scores_gemma":[0.0064313225,0.0020753494,0.36568898,0.000042319818,0.000108149936,0.0005030072,0.00073917175,0.002134206,0.5989948,0.00014192442,0.02192658,0.0012142023],"about_ca_topic_score_codex":0.000019786037,"about_ca_topic_score_gemma":0.000036217763,"teacher_disagreement_score":0.3676948,"about_ca_system_score_codex":0.000015193234,"about_ca_system_score_gemma":0.00004143129,"threshold_uncertainty_score":0.7983882},"labels":[],"label_agreement":null},{"id":"W2097311750","doi":"10.1128/ec.05083-11","title":"Cellular Effects and Epistasis among Three Determinants of Adaptation in Experimental Populations of Saccharomyces cerevisiae","year":2011,"lang":"en","type":"article","venue":"Eukaryotic Cell","topic":"Evolution and Genetic Dynamics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":16,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Epistasis; Biology; Genetics; Saccharomyces cerevisiae; Allele; Gene; Mutation; Phenotype; Mutant; Evolutionary biology","score_opus":0.02128116352893247,"score_gpt":0.2403885208980362,"score_spread":0.21910735736910372,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2097311750","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9961836,0.0014195197,0.0017384752,0.0000013798111,0.000056401193,0.00016295804,0.000005244613,0.000002503155,0.000429953],"genre_scores_gemma":[0.9965091,0.00004301171,0.0033486893,0.0000049178325,0.000010427847,0.0000059023987,0.000022628732,0.000009304939,0.00004603157],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9994149,0.00003598857,0.00022728002,0.00015750746,0.00006580903,0.00009851604],"domain_scores_gemma":[0.99966204,0.0000075299686,0.000114278104,0.00015654536,0.00002309951,0.000036526075],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000072934796,0.000086275104,0.00013462019,0.000048884423,0.000017364127,0.0000021246142,0.00006877653,0.00006905164,0.000018722183],"category_scores_gemma":[0.000014576128,0.00008886701,0.000039701947,0.00005682513,0.00008327225,0.000003984693,0.000047923368,0.000028130651,9.525977e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000026421807,0.00015623924,0.88148296,0.00010539418,0.0000061702876,0.0000021151704,0.00044901526,0.00007303052,0.1169254,0.00004742812,0.000007280334,0.0007185131],"study_design_scores_gemma":[0.00034530624,0.00018764938,0.6736032,0.00002250709,0.000012154514,9.61932e-7,0.00014626063,0.0039834073,0.32154202,0.000082883314,0.000001517138,0.000072119976],"about_ca_topic_score_codex":0.00023595744,"about_ca_topic_score_gemma":0.0004642051,"teacher_disagreement_score":0.20787978,"about_ca_system_score_codex":0.0000060337507,"about_ca_system_score_gemma":0.00001685953,"threshold_uncertainty_score":0.36238918},"labels":[],"label_agreement":null},{"id":"W2098405288","doi":"10.1128/ec.00107-13","title":"Lipid Composition of Multilamellar Bodies Secreted by Dictyostelium discoideum Reveals Their Amoebal Origin","year":2013,"lang":"en","type":"article","venue":"Eukaryotic Cell","topic":"Lipid Membrane Structure and Behavior","field":"Biochemistry, Genetics and Molecular Biology","cited_by":34,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval; Institut universitaire de cardiologie et de pneumologie de Québec","funders":"","keywords":"Dictyostelium discoideum; Bacteria; Biochemistry; Biology; Fatty acid; Sphingomyelin; Polyunsaturated fatty acid; Cell biology; Membrane","score_opus":0.006629247478581419,"score_gpt":0.2172709911343189,"score_spread":0.21064174365573748,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2098405288","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9971357,0.00031731642,0.00019284575,0.00012156372,0.00037142975,0.00038099798,0.00011287702,0.00002031139,0.0013469852],"genre_scores_gemma":[0.9962533,0.00011344295,0.00034162815,0.00020962284,0.00032405846,0.000019848803,0.0006928281,0.000030096908,0.0020151827],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9988162,0.000080763726,0.00032792208,0.00033867176,0.00014511043,0.00029134762],"domain_scores_gemma":[0.99921626,0.0000224569,0.00014915416,0.00040385895,0.000098755765,0.00010952872],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0000828971,0.00023920176,0.00026642598,0.000034431927,0.00006397827,0.00002546936,0.00021568208,0.00016896527,0.0001875091],"category_scores_gemma":[0.000011997155,0.00018907255,0.00013483355,0.00005763843,0.00012437385,0.000009937115,0.000099618446,0.000111430614,0.000034431083],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000029461145,0.00009053687,0.015343703,0.00006810015,0.00002339606,9.406773e-7,0.0000880687,0.0000067170467,0.9749593,0.0000038359694,0.008899879,0.00048604043],"study_design_scores_gemma":[0.00058290927,0.00021741535,0.022456087,0.00002233131,0.000044428405,0.000008039533,0.00010585976,0.00003613487,0.974128,0.000013432749,0.0021495244,0.0002358003],"about_ca_topic_score_codex":0.000102630824,"about_ca_topic_score_gemma":0.0000070988353,"teacher_disagreement_score":0.0071123834,"about_ca_system_score_codex":0.000012329533,"about_ca_system_score_gemma":0.000031982112,"threshold_uncertainty_score":0.77101547},"labels":[],"label_agreement":null},{"id":"W2099160222","doi":"10.1128/ec.00152-06","title":"Modulation of <i>Leishmania</i> ABC Protein Gene Expression through Life Stages and among Drug-Resistant Parasites","year":2006,"lang":"en","type":"article","venue":"Eukaryotic Cell","topic":"Research on Leishmaniasis Studies","field":"Medicine","cited_by":101,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"","keywords":"Biology; Leishmania infantum; Gene; Genetics; Gene expression profiling; ATP-binding cassette transporter; DNA microarray; Genome; Leishmania; Computational biology; Amastigote; Gene expression; Leishmaniasis; Visceral leishmaniasis","score_opus":0.013986950064549614,"score_gpt":0.2524345182484133,"score_spread":0.23844756818386367,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2099160222","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98958576,0.0025105027,0.000322003,0.0004922485,0.000038517148,0.0010527275,0.00001608759,0.00007042342,0.0059117177],"genre_scores_gemma":[0.99071133,0.00019612061,0.0052170064,0.000053709737,0.00017174635,0.000054092812,0.000036592566,0.00003990453,0.0035194864],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99795705,0.000107373555,0.0004929536,0.00042207906,0.00064773863,0.00037279972],"domain_scores_gemma":[0.9989204,0.0001307622,0.00021201446,0.00040921016,0.00019690846,0.00013069963],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002822719,0.0002370447,0.0004733236,0.000106992804,0.00014981822,0.000035949357,0.00010563317,0.00008162055,0.00007413192],"category_scores_gemma":[0.00015031408,0.00019480358,0.00008656686,0.00021168498,0.00027320333,0.00024165539,0.00013641121,0.00018949805,0.000014490483],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00020210817,0.0003400469,0.56670713,0.0005643347,0.000030276326,0.000045471083,0.00034272653,0.00009059151,0.4268072,0.00008222097,0.0046828184,0.000105087514],"study_design_scores_gemma":[0.0010787612,0.00015389593,0.66766757,0.00019724364,0.000037800466,0.0000021287537,0.00015922594,0.00020065013,0.32995507,0.00028280434,0.00013031015,0.0001345347],"about_ca_topic_score_codex":0.00083290425,"about_ca_topic_score_gemma":0.000076240685,"teacher_disagreement_score":0.100960426,"about_ca_system_score_codex":0.00005675091,"about_ca_system_score_gemma":0.00007000917,"threshold_uncertainty_score":0.79438597},"labels":[],"label_agreement":null},{"id":"W2100387642","doi":"10.1128/ec.1.1.75-84.2002","title":"Adenylyl Cyclase Functions Downstream of the Gα Protein Gpa1 and Controls Mating and Pathogenicity of <i>Cryptococcus neoformans</i>","year":2002,"lang":"en","type":"article","venue":"Eukaryotic Cell","topic":"Fungal Infections and Studies","field":"Medicine","cited_by":204,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"National Institute of Allergy and Infectious Diseases; Canadian Institutes of Health Research; Infectious Diseases Society of America; Howard Hughes Medical Institute","keywords":"Cryptococcus neoformans; Biology; Adenylyl cyclase; Mating; ADCY9; Cell biology; Pathogenicity; Gs alpha subunit; Cryptococcus; Fungal protein; Microbiology; Genetics; Virology; Saccharomyces cerevisiae; Signal transduction; Gene","score_opus":0.009493209842616325,"score_gpt":0.18999616630119845,"score_spread":0.18050295645858214,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2100387642","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98543745,0.0011594682,0.0000763577,0.0003145525,0.00006750174,0.0007246612,0.000032279884,0.0000165438,0.012171157],"genre_scores_gemma":[0.9979235,0.00008238819,0.00022591325,0.00006341168,0.000041375464,0.00003118371,0.0000014765784,0.000007957593,0.0016227803],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99930155,0.000032386866,0.00027248595,0.00013069235,0.000121011486,0.00014187532],"domain_scores_gemma":[0.9994783,0.00007964333,0.00012215329,0.00019599075,0.00006797801,0.000055945195],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000110078596,0.00010942938,0.00026410844,0.000041573385,0.00014608979,0.000007325857,0.000031023123,0.000047552723,0.00010821628],"category_scores_gemma":[0.000072849034,0.00007112596,0.00007314837,0.00013424463,0.00017556551,0.00004186884,0.000060947663,0.00013938466,0.00000477464],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015199749,0.0011497195,0.7311089,0.0015212918,0.0002331763,0.000015843954,0.0019893688,0.00005958533,0.2502506,0.00034041645,0.0030157294,0.0101633575],"study_design_scores_gemma":[0.0065509453,0.0015253881,0.9192948,0.00065111957,0.000705033,0.00016807843,0.0016643696,0.004381854,0.06321711,0.00016280077,0.0013499568,0.0003285799],"about_ca_topic_score_codex":0.00007392482,"about_ca_topic_score_gemma":0.000020698797,"teacher_disagreement_score":0.18818586,"about_ca_system_score_codex":0.000012583841,"about_ca_system_score_gemma":0.000012602789,"threshold_uncertainty_score":0.29004326},"labels":[],"label_agreement":null},{"id":"W2100654519","doi":"10.1128/ec.3.2.288-301.2004","title":"Role of Micronucleus-Limited DNA in Programmed Deletion of mse2.9 during Macronuclear Development of <i>Tetrahymena thermophila</i>","year":2004,"lang":"en","type":"article","venue":"Eukaryotic Cell","topic":"Protist diversity and phylogeny","field":"Biochemistry, Genetics and Molecular Biology","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"York University","funders":"Canadian Institutes of Health Research; York University","keywords":"Macronucleus; Tetrahymena; Biology; Genetics; DNA; Micronucleus; Gene; Molecular biology; Cell biology; Micronucleus test","score_opus":0.0046212270232958,"score_gpt":0.18084654711477421,"score_spread":0.17622532009147843,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2100654519","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99849534,0.000447162,0.000040474282,0.000012422276,0.000023205354,0.00023879846,0.000013760921,0.0000047140475,0.00072414306],"genre_scores_gemma":[0.99716926,0.00004595628,0.0026640291,0.0000138991745,0.000013579184,0.0000030694744,0.000044193144,0.000013366248,0.000032629097],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9991571,0.000027839504,0.00031358557,0.00019561329,0.000117946794,0.0001879709],"domain_scores_gemma":[0.999542,0.000004620483,0.00016120146,0.0001985743,0.000052411287,0.000041175655],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00011115434,0.00011407849,0.00017863815,0.0000631019,0.000028823899,0.0000026236762,0.00019090624,0.000106199666,0.000017637774],"category_scores_gemma":[0.000009672672,0.00012358226,0.00007102051,0.00012341035,0.00008653718,0.0000034510263,0.00011779321,0.00006395136,0.000004038074],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00018010734,0.00038483195,0.044835392,0.00017399396,0.000027607062,0.0000022830354,0.0006557778,0.00014629583,0.95281404,0.000016892458,0.0000042131396,0.000758546],"study_design_scores_gemma":[0.00091100973,0.00011942447,0.2926496,0.000035710626,0.000009016358,0.0000019778265,0.00013431373,0.0000027395288,0.70596355,0.000038482896,0.000048867158,0.000085303385],"about_ca_topic_score_codex":0.000061472776,"about_ca_topic_score_gemma":0.00005130217,"teacher_disagreement_score":0.2478142,"about_ca_system_score_codex":0.000028450493,"about_ca_system_score_gemma":0.000098017044,"threshold_uncertainty_score":0.5039538},"labels":[],"label_agreement":null},{"id":"W2101006714","doi":"10.1128/ec.00017-08","title":"Carnitine-Dependent Transport of Acetyl Coenzyme A in <i>Candida albicans</i> Is Essential for Growth on Nonfermentable Carbon Sources and Contributes to Biofilm Formation","year":2008,"lang":"en","type":"article","venue":"Eukaryotic Cell","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":46,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"University of Alberta","keywords":"Peroxisome; Biology; Candida albicans; Biochemistry; Corpus albicans; Acetyl-CoA; Mutant; Mitochondrial matrix; Carnitine; Saccharomyces cerevisiae; Mitochondrion; Intracellular; Coenzyme A; Metabolism; Enzyme; Microbiology; Gene; Reductase; Cytosol","score_opus":0.011625593115069725,"score_gpt":0.23657005217658103,"score_spread":0.2249444590615113,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2101006714","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9956885,0.00025661406,0.00087282486,0.0005478375,0.00005467612,0.0009560027,0.00008555519,0.00001726321,0.0015207023],"genre_scores_gemma":[0.9983151,0.00013174095,0.00017783097,0.00051707734,0.000040999796,0.000034359702,0.00005466891,0.000015533278,0.0007127215],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9988025,0.000019153149,0.0003869423,0.00026827576,0.00024719082,0.0002759485],"domain_scores_gemma":[0.9994545,0.000082577615,0.000081760656,0.00016798469,0.000104255574,0.00010891973],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00019663801,0.00015445834,0.000407975,0.00012721,0.000059460945,0.0000051247425,0.000058140507,0.00007845712,0.000039946783],"category_scores_gemma":[0.000032812146,0.00013840635,0.000078642726,0.00016099015,0.000082218,0.00005664982,0.000013056001,0.00010620322,0.0000024383355],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0020769956,0.0004895303,0.9416974,0.0006878339,0.0000313584,0.000032704516,0.0021784038,0.000012430478,0.05154834,0.00007547951,0.001097487,0.00007199611],"study_design_scores_gemma":[0.00567119,0.001093902,0.5088903,0.00021757347,0.00012427218,0.000013077291,0.000887228,0.00038864743,0.48225957,0.000070722504,0.00019429134,0.00018927436],"about_ca_topic_score_codex":0.00083508855,"about_ca_topic_score_gemma":0.0004750728,"teacher_disagreement_score":0.43280718,"about_ca_system_score_codex":0.00008097771,"about_ca_system_score_gemma":0.00010168832,"threshold_uncertainty_score":0.5644047},"labels":[],"label_agreement":null},{"id":"W2101638760","doi":"10.1128/ec.05199-11","title":"Physiological and Biochemical Characterization of AnNitA, the Aspergillus nidulans High-Affinity Nitrite Transporter","year":2011,"lang":"en","type":"article","venue":"Eukaryotic Cell","topic":"Amino Acid Enzymes and Metabolism","field":"Biochemistry, Genetics and Molecular Biology","cited_by":10,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"Biotechnology and Biological Sciences Research Council","keywords":"Aspergillus nidulans; Asparagine; Transporter; Biology; Nitrite; Biochemistry; Kinetics; Enzyme kinetics; Enzyme; Gene; Active site; Physics; Ecology","score_opus":0.013410690794931032,"score_gpt":0.1851239703497589,"score_spread":0.17171327955482785,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2101638760","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9982191,0.00035617812,0.00038507846,0.000033390366,0.00010416267,0.00012088259,0.000059602375,0.0000079464,0.00071369804],"genre_scores_gemma":[0.99846,0.00038698482,0.00027196776,0.00019520051,0.00014997869,0.0000060503316,0.00024550405,0.0000117589225,0.000272576],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9993245,0.000040656058,0.00017926942,0.00022359793,0.00007298305,0.00015899258],"domain_scores_gemma":[0.9995874,0.0000058429027,0.00007215648,0.00023852613,0.000038806662,0.000057249712],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0000834618,0.00012722831,0.00015266096,0.000015673484,0.00004302056,0.0000044630374,0.00013807893,0.0001271483,0.00008565873],"category_scores_gemma":[0.000009761715,0.00008519362,0.00006594531,0.000050889084,0.00016132304,0.0000037540906,0.000051958537,0.00008165636,0.000005296129],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000058578666,0.00012032021,0.006551285,0.0000185487,0.000017532395,0.0000019771674,0.00014718765,5.328537e-7,0.99241704,0.00009527019,0.00018203774,0.00038970014],"study_design_scores_gemma":[0.00026739057,0.00010554208,0.51253134,0.00000313662,0.000028621533,0.000003675266,0.000026095991,0.000007962892,0.4863535,0.000036339075,0.0005497519,0.000086677595],"about_ca_topic_score_codex":0.000027439777,"about_ca_topic_score_gemma":0.0000018455024,"teacher_disagreement_score":0.5060635,"about_ca_system_score_codex":0.0000018856117,"about_ca_system_score_gemma":0.000014845193,"threshold_uncertainty_score":0.34740952},"labels":[],"label_agreement":null},{"id":"W2102302344","doi":"10.1128/ec.00122-10","title":"Sawyeria marylandensis (Heterolobosea) Has a Hydrogenosome with Novel Metabolic Properties","year":2010,"lang":"en","type":"article","venue":"Eukaryotic Cell","topic":"Parasitic Infections and Diagnostics","field":"Immunology and Microbiology","cited_by":39,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University","funders":"Canadian Institutes of Health Research; Institució Catalana de Recerca i Estudis Avançats","keywords":"Biology; Hydrogenase; Biochemistry; Organelle; Mitochondrion; Ferredoxin; Metabolic pathway; Oxidoreductase; Citric acid cycle; Pyruvate dehydrogenase complex; Oxidative phosphorylation; Enzyme; Cell biology","score_opus":0.015224090810495777,"score_gpt":0.1977114254901876,"score_spread":0.18248733467969183,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2102302344","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9906394,0.00094201905,0.00036256312,0.00022037348,0.0012079154,0.00026490967,0.000040636063,0.000120117664,0.0062020994],"genre_scores_gemma":[0.9965674,0.000026301535,0.000489857,0.00027302813,0.000089375986,0.000037305304,0.000049197246,0.000029284596,0.0024382488],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9989329,0.000044449713,0.00021719003,0.0003140499,0.00004834491,0.00044306772],"domain_scores_gemma":[0.9992683,0.00010566439,0.00008028367,0.00041664028,0.000079682715,0.00004944323],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.000121061996,0.00023514804,0.000302514,0.000105892046,0.00034624073,0.000049815793,0.00017514112,0.00021707673,0.0010280483],"category_scores_gemma":[0.00006189647,0.00016956752,0.00008365052,0.00014059723,0.0004114698,0.00008522316,0.00006360338,0.00042959378,0.0014061163],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012938885,0.00066520326,0.06698691,0.000023773016,0.0001927315,0.000023346927,0.00030800796,0.00004593794,0.92879087,0.00074290804,0.0017939727,0.00029697156],"study_design_scores_gemma":[0.0043973895,0.00055765297,0.28923965,0.000033700162,0.00042322988,0.0012195217,0.00011736152,0.00007241995,0.6536956,0.00008982134,0.049429357,0.0007242864],"about_ca_topic_score_codex":0.00022766012,"about_ca_topic_score_gemma":0.00017012423,"teacher_disagreement_score":0.27509522,"about_ca_system_score_codex":0.000012102126,"about_ca_system_score_gemma":0.00012468731,"threshold_uncertainty_score":0.99988514},"labels":[],"label_agreement":null},{"id":"W2102357526","doi":"10.1128/ec.00119-08","title":"<i>Schizosaccharomyces pombe</i> Noc3 Is Essential for Ribosome Biogenesis and Cell Division but Not DNA Replication","year":2008,"lang":"en","type":"article","venue":"Eukaryotic Cell","topic":"DNA Repair Mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Sherbrooke","funders":"National Institute of General Medical Sciences; Canadian Institutes of Health Research","keywords":"Schizosaccharomyces pombe; Biology; DNA replication; Eukaryotic DNA replication; Schizosaccharomyces; Ribosome biogenesis; Biogenesis; Control of chromosome duplication; Cell biology; Licensing factor; Origin recognition complex; Genetics; Cell division; DNA; Ribosome; Pre-replication complex; Origin of replication; Cell; RNA; Yeast; Gene; Saccharomyces cerevisiae","score_opus":0.010442388482511986,"score_gpt":0.22380808233124094,"score_spread":0.21336569384872894,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2102357526","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9936838,0.00071487564,0.004062183,0.00018352502,0.0002274946,0.00046954115,0.00013656032,0.000041366406,0.00048065768],"genre_scores_gemma":[0.9907643,0.00056854036,0.0040786485,0.0005001824,0.0002378551,0.0000520271,0.00028175148,0.00005053615,0.0034661654],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.998411,0.000037796253,0.00027495137,0.00078756467,0.0001777773,0.00031089806],"domain_scores_gemma":[0.9988671,0.000029477804,0.000143243,0.0007433144,0.00008385,0.00013303326],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00016304542,0.00023509435,0.00020133216,0.000052473086,0.00020049351,0.000025955505,0.00022071475,0.0001961176,0.000036747057],"category_scores_gemma":[0.00003462167,0.00023711298,0.00014688598,0.000080783626,0.0000750261,0.000009590892,0.00017536689,0.000056958324,0.00003820103],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000113388865,0.00013495564,0.002410737,0.00006923152,0.000016735215,0.0000037862685,0.000062489744,0.0000040527198,0.9938618,0.00001639362,0.0027978085,0.0005086287],"study_design_scores_gemma":[0.00092080346,0.00033032367,0.0063761687,0.0000075711814,0.00004265518,0.00002536259,0.000024758283,0.00021640451,0.9885963,0.00007280357,0.003098471,0.00028832976],"about_ca_topic_score_codex":0.00002643333,"about_ca_topic_score_gemma":0.000003262931,"teacher_disagreement_score":0.0052654445,"about_ca_system_score_codex":0.000012764143,"about_ca_system_score_gemma":0.000056894576,"threshold_uncertainty_score":0.9669187},"labels":[],"label_agreement":null},{"id":"W2103071882","doi":"10.1128/ec.05264-11","title":"Genome-Based Reconstruction of the Protein Import Machinery in the Secondary Plastid of a Chlorarachniophyte Alga","year":2012,"lang":"en","type":"article","venue":"Eukaryotic Cell","topic":"Photosynthetic Processes and Mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":37,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia; Canadian Institute for Advanced Research","funders":"","keywords":"Plastid; Biology; Chloroplast; Genome; Chloroplast membrane; Translocon; Inner membrane; Cell biology; Membrane protein; Botany; Gene; Genetics; Membrane; Thylakoid","score_opus":0.005621622195556753,"score_gpt":0.1943522183130897,"score_spread":0.18873059611753293,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2103071882","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99574286,0.00037894465,0.00044928864,0.000047300895,0.00016716568,0.00035929456,0.000024456056,0.0000029609353,0.0028277135],"genre_scores_gemma":[0.9993554,0.000013628774,0.00028420406,0.000094699506,0.00007968572,0.000031616863,0.000018188759,0.000011947916,0.000110647925],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9992302,0.00006597789,0.00024981413,0.00014077708,0.00012521706,0.00018802141],"domain_scores_gemma":[0.9993859,0.000013619077,0.00019162016,0.00035002566,0.000027249596,0.0000315691],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00035795334,0.000111540394,0.00013054605,0.00003108002,0.00003239015,0.0000037179923,0.00025685653,0.00008125595,0.000041955205],"category_scores_gemma":[0.00003103528,0.00006965382,0.00009493961,0.00011648239,0.000081422084,0.0000050285785,0.000060305996,0.00012009175,0.0000015481011],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006253831,0.00015675182,0.0054062693,0.00011771473,0.000007369,4.7317377e-7,0.00007698452,0.000021462287,0.9935107,0.00002633278,0.000010790398,0.0006026109],"study_design_scores_gemma":[0.00037003422,0.00012135448,0.032399334,0.000026618429,0.000015353811,0.000022378867,0.00008439228,0.000056049197,0.96635616,0.000096759715,0.00036707902,0.00008446548],"about_ca_topic_score_codex":0.000027777847,"about_ca_topic_score_gemma":0.0000096966305,"teacher_disagreement_score":0.027154524,"about_ca_system_score_codex":0.000008375283,"about_ca_system_score_gemma":0.00015186892,"threshold_uncertainty_score":0.28404003},"labels":[],"label_agreement":null},{"id":"W2104035394","doi":"10.1128/ec.00332-08","title":"Depletion of the Cullin Cdc53p Induces Morphogenetic Changes in <i>Candida albicans</i>","year":2009,"lang":"en","type":"article","venue":"Eukaryotic Cell","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":24,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Biotechnology Research Institute; Université de Montréal; Institute for Research in Immunology and Cancer","funders":"Health Canada","keywords":"Biology; Candida albicans; Corpus albicans; Ubiquitin ligase; Cell biology; Mutant; Cullin; Filamentation; Ubiquitin; Microbiology; Gene; Biochemistry","score_opus":0.011442361493184273,"score_gpt":0.23946330178587202,"score_spread":0.22802094029268774,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2104035394","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9921408,0.00077035715,0.000026062482,0.0017076839,0.00009227067,0.00032787293,0.000004456578,0.000013281361,0.004917161],"genre_scores_gemma":[0.9974239,0.00018498587,0.00016287011,0.00087813445,0.00006362511,0.0000036494052,0.0000059819727,0.000008043354,0.0012688315],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99902725,0.00005696698,0.00023109131,0.00021334917,0.00026359965,0.0002077509],"domain_scores_gemma":[0.99940777,0.000043343895,0.00008094501,0.00036556993,0.000041985397,0.000060402246],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00019834905,0.00011391783,0.00025118122,0.00005527703,0.000033063712,0.0000050624003,0.00012102962,0.00007729549,0.00020983076],"category_scores_gemma":[0.000055770175,0.00007826131,0.00008071563,0.00030102464,0.00008071539,0.000021449281,0.000020152767,0.00017240476,0.000014814438],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00027174084,0.000341855,0.8628671,0.000120239085,0.0000072813086,0.000019636667,0.0003218277,0.000026191336,0.13118282,0.000040883857,0.0006952388,0.004105154],"study_design_scores_gemma":[0.00061338797,0.00029594862,0.8865522,0.000109053115,0.00002787476,0.000004022194,0.00013705426,0.000036758353,0.111825556,0.00016607092,0.00016166441,0.00007037924],"about_ca_topic_score_codex":0.00011441954,"about_ca_topic_score_gemma":0.00058185845,"teacher_disagreement_score":0.023685103,"about_ca_system_score_codex":0.000054649074,"about_ca_system_score_gemma":0.000087265245,"threshold_uncertainty_score":0.31914034},"labels":[],"label_agreement":null},{"id":"W2104128007","doi":"10.1128/ec.05025-11","title":"Characterization, Localization, Essentiality, and High-Resolution Crystal Structure of Glucosamine 6-Phosphate <i>N</i> -Acetyltransferase from Trypanosoma brucei","year":2011,"lang":"en","type":"article","venue":"Eukaryotic Cell","topic":"Trypanosoma species research and implications","field":"Medicine","cited_by":31,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Structural Genomics Consortium; University of Toronto","funders":"Canadian Institutes of Health Research; Wellcome Trust","keywords":"Trypanosoma brucei; Biology; Glycosylation; Biochemistry; Acetyltransferase; Mutant; Trypanosoma; Glucosamine; Glycoprotein; Transferase; Escherichia coli; Molecular biology; Gene; Enzyme; Genetics","score_opus":0.013757406482347658,"score_gpt":0.22476203116576943,"score_spread":0.21100462468342177,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2104128007","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.95182776,0.0003499905,0.04558276,0.00027737077,0.0001356692,0.0005300747,0.00072582276,0.000064058404,0.0005064632],"genre_scores_gemma":[0.9950293,0.00039028813,0.0015013925,0.00021037566,0.00015133397,0.000008116335,0.0023637032,0.000034979195,0.0003105442],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9984326,0.000063377054,0.00047431898,0.0003797126,0.00035163315,0.00029838123],"domain_scores_gemma":[0.9988363,0.00004107017,0.00012891206,0.00045789193,0.00026220316,0.00027364824],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.000013441244,0.00020757254,0.00034884148,0.000114710565,0.000121466626,0.000025906216,0.00013140774,0.00013505571,0.0013412727],"category_scores_gemma":[0.00005188821,0.00019351127,0.0000666046,0.0003669191,0.00023744915,0.00019731579,0.00006479463,0.00016121256,0.0000140979055],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00027293144,0.00036361694,0.036501072,0.00016897294,0.000060532064,0.000010011549,0.00045956677,0.000005279814,0.9604706,0.00072232814,0.00030740316,0.0006576805],"study_design_scores_gemma":[0.0014859191,0.00017349857,0.63549614,0.000037058726,0.00008785959,0.000015340393,0.000047958776,0.00038049632,0.3614514,0.0003580869,0.0003442454,0.000122027595],"about_ca_topic_score_codex":0.0008305947,"about_ca_topic_score_gemma":0.000080111466,"teacher_disagreement_score":0.5990192,"about_ca_system_score_codex":0.000037706573,"about_ca_system_score_gemma":0.00012512885,"threshold_uncertainty_score":0.9995716},"labels":[],"label_agreement":null},{"id":"W2104863570","doi":"10.1128/ec.00138-14","title":"Membrane Fluidity and Temperature Sensing Are Coupled via Circuitry Comprised of Ole1, Rsp5, and Hsf1 in Candida albicans","year":2014,"lang":"en","type":"article","venue":"Eukaryotic Cell","topic":"Fungal and yeast genetics research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":60,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Canadian Institutes of Health Research; Wellcome Trust","keywords":"Candida albicans; HSF1; Biology; Heat shock; Heat shock protein; Heat shock factor; Ubiquitin ligase; Saccharomyces cerevisiae; Membrane fluidity; Cell biology; Hsp70; Biochemistry; Microbiology; Yeast; Ubiquitin; Membrane; Gene","score_opus":0.005379933140597564,"score_gpt":0.2068913424409179,"score_spread":0.20151140930032033,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2104863570","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99771,0.0010273712,0.00013202934,0.000090895264,0.00006320273,0.00015751028,0.000014757293,0.0000046804807,0.00079956226],"genre_scores_gemma":[0.99897575,0.00031104966,0.00017469264,0.00009978352,0.00009245797,0.0000015917709,0.00004261528,0.000017590066,0.0002844672],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9989874,0.000097607,0.00018807803,0.00033235154,0.00015056164,0.0002440347],"domain_scores_gemma":[0.9994563,0.000040074177,0.00005707226,0.00024979806,0.00007026796,0.00012647538],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00022068768,0.0001498918,0.00023558494,0.000054493597,0.00005302483,0.000019777612,0.00009120328,0.00015577716,0.000017485369],"category_scores_gemma":[0.000048082504,0.00014061051,0.000033606324,0.00009486314,0.00014296622,0.0000024100048,0.00011828607,0.00016057544,0.0000017713134],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000055983804,0.000049368507,0.035291363,0.00017011246,0.000012414622,0.0000071248137,0.00006043853,0.000062992185,0.9636155,0.0000036776273,0.00009637321,0.0005746434],"study_design_scores_gemma":[0.001802601,0.00025423648,0.22196412,0.0000664033,0.00002009776,0.000031728276,0.0001289613,0.007219486,0.7678837,0.000051835996,0.0002995973,0.00027723107],"about_ca_topic_score_codex":0.0001505432,"about_ca_topic_score_gemma":0.00019741103,"teacher_disagreement_score":0.1957318,"about_ca_system_score_codex":0.000008977194,"about_ca_system_score_gemma":0.00004535385,"threshold_uncertainty_score":0.57339305},"labels":[],"label_agreement":null},{"id":"W2105008446","doi":"10.1128/ec.2.5.1036-1045.2003","title":"Recapitulation of the Sexual Cycle of the Primary Fungal Pathogen <i>Cryptococcus neoformans</i> var. <i>gattii</i> : Implications for an Outbreak on Vancouver Island, Canada","year":2003,"lang":"en","type":"article","venue":"Eukaryotic Cell","topic":"Fungal Infections and Studies","field":"Medicine","cited_by":298,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"National Institute of Allergy and Infectious Diseases; Howard Hughes Medical Institute; National Science Foundation","keywords":"Cryptococcus gattii; Cryptococcus neoformans; Outbreak; Biology; Cryptococcosis; Pathogen; Fungal pathogen; Microbiology; Virology; Cryptococcus","score_opus":0.012608680762992553,"score_gpt":0.22669459528170602,"score_spread":0.21408591451871348,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2105008446","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.946424,0.00013932119,0.00039236667,0.0006198076,0.0010513046,0.0016945929,0.000405491,0.000017641645,0.04925548],"genre_scores_gemma":[0.99707884,0.000007683341,0.00016660275,0.0008524382,0.000067461835,0.000057333047,0.000017656806,0.000017393952,0.0017346111],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9990632,0.000064757754,0.00031518648,0.00017542811,0.00018961227,0.00019182304],"domain_scores_gemma":[0.9989462,0.00014295074,0.00017283024,0.0005359124,0.00015034665,0.000051798263],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00017069858,0.00013229878,0.0002254663,0.000025459123,0.00023873198,0.000004313027,0.00011273898,0.000052533764,0.000020993642],"category_scores_gemma":[0.000053686093,0.00007836614,0.00010032401,0.00020452097,0.00006842074,0.000043312713,0.000034540197,0.00012731765,9.257886e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00024581476,0.0013939637,0.7702396,0.0006527633,0.00018365683,0.0000011553907,0.0012007876,0.004239409,0.047817446,0.0019266359,0.16943982,0.0026589623],"study_design_scores_gemma":[0.0015094341,0.00052973384,0.97242385,0.00005140264,0.00023304515,0.000008850373,0.00039511966,0.00021173128,0.011484898,0.00033989167,0.012651518,0.00016049756],"about_ca_topic_score_codex":0.008133577,"about_ca_topic_score_gemma":0.13039288,"teacher_disagreement_score":0.2021843,"about_ca_system_score_codex":0.0001197644,"about_ca_system_score_gemma":0.00043206048,"threshold_uncertainty_score":0.9984713},"labels":[],"label_agreement":null},{"id":"W2105673410","doi":"10.1128/ec.00034-10","title":"Adaptations of Candida albicans for Growth in the Mammalian Intestinal Tract","year":2010,"lang":"en","type":"article","venue":"Eukaryotic Cell","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":144,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Biotechnology Research Institute","funders":"National Institute of Allergy and Infectious Diseases; Canadian Institutes of Health Research; National Institutes of Health","keywords":"Candida albicans; Biology; Corpus albicans; Microbiology; Gene; Fungus; Pathogen; Colonization; Population; Gene expression; Pathogenic fungus; Genetics","score_opus":0.019516141792307505,"score_gpt":0.27543249707245815,"score_spread":0.25591635528015066,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2105673410","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9852442,0.00004065221,0.0005854012,0.0011035274,0.00008769755,0.00040917296,0.000014788927,0.000008232764,0.0125063155],"genre_scores_gemma":[0.99617076,0.000006018098,0.0022949572,0.00018782784,0.000070772,0.000018474731,0.000018806462,0.000008131303,0.0012242424],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9993227,0.000017317401,0.00021553968,0.00013962998,0.00014538111,0.00015943365],"domain_scores_gemma":[0.9992473,0.00034747412,0.000053424712,0.00021464896,0.000085952954,0.000051182753],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003453837,0.00007633698,0.00015503177,0.00004488838,0.0000390308,0.0000059700437,0.00010871136,0.00004381621,0.00020732246],"category_scores_gemma":[0.00035506938,0.000051652893,0.00008289589,0.0001451697,0.00010077013,0.000032286473,0.000006888147,0.00023349789,0.000007802307],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015953521,0.0005466932,0.984338,0.00016312613,0.0000047933418,0.0000204793,0.0011104575,0.0000015880281,0.00966073,0.0019340597,0.001051431,0.0010090988],"study_design_scores_gemma":[0.000673902,0.0002440297,0.9946307,0.000026879206,0.000044619268,0.000014258224,0.0009295258,0.00018793617,0.0023942098,0.00046960154,0.00032940597,0.000054908996],"about_ca_topic_score_codex":0.000491161,"about_ca_topic_score_gemma":0.0023403876,"teacher_disagreement_score":0.011282073,"about_ca_system_score_codex":0.000015150694,"about_ca_system_score_gemma":0.00014957773,"threshold_uncertainty_score":0.22700356},"labels":[],"label_agreement":null},{"id":"W2106294781","doi":"10.1128/ec.00304-10","title":"Quantifying the Importance of Galactofuranose in Aspergillus nidulans Hyphal Wall Surface Organization by Atomic Force Microscopy","year":2011,"lang":"en","type":"article","venue":"Eukaryotic Cell","topic":"Fungal and yeast genetics research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":43,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan; University of Regina","funders":"Canadian Institutes of Health Research; University of Regina","keywords":"Cell wall; Aspergillus nidulans; Biology; Viscoelasticity; Strain (injury); Hypha; Biophysics; Wild type; Biochemistry; Microbiology; Materials science; Mutant; Anatomy; Gene","score_opus":0.018973969336998776,"score_gpt":0.25423677958873103,"score_spread":0.23526281025173226,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2106294781","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99667996,0.0015341683,0.00020925919,0.000046390036,0.00008155294,0.00020058379,0.000018501572,0.000005995201,0.0012235583],"genre_scores_gemma":[0.99793243,0.00037914363,0.00037572344,0.00008155823,0.000023943978,0.0000023988855,0.00009047118,0.000030660176,0.0010836679],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99895465,0.000073479365,0.00025685708,0.00028441154,0.00015023073,0.00028037518],"domain_scores_gemma":[0.99939114,0.000018248997,0.00008756186,0.00035471862,0.000090335096,0.00005798285],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00019534485,0.00013969395,0.00013655052,0.000024288081,0.000053032698,0.000011802002,0.00032255528,0.000111802445,0.00011514107],"category_scores_gemma":[0.00003761316,0.000110844696,0.00004711049,0.00020315025,0.00009391551,0.0000041797475,0.000119535965,0.00011912513,0.000023404487],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000040413142,0.00007495468,0.3819517,0.000025440055,0.000007654818,0.000002303216,0.0001559482,0.000037117305,0.6173443,0.000010126256,0.00032623357,0.00002382363],"study_design_scores_gemma":[0.00044068688,0.00011004707,0.10549932,0.0000103238135,0.000007528919,0.000004892756,0.00007301203,0.00022062619,0.8933856,0.000027324159,0.000096256466,0.00012441074],"about_ca_topic_score_codex":0.00012456691,"about_ca_topic_score_gemma":0.00012010481,"teacher_disagreement_score":0.27645236,"about_ca_system_score_codex":0.00001814697,"about_ca_system_score_gemma":0.000083233754,"threshold_uncertainty_score":0.45201156},"labels":[],"label_agreement":null},{"id":"W2106896301","doi":"10.1128/ec.05078-11","title":"Vacuolar Protein Sorting Genes Regulate Mat Formation in Saccharomyces cerevisiae by Flo11p-Dependent and -Independent Mechanisms","year":2011,"lang":"en","type":"article","venue":"Eukaryotic Cell","topic":"Fungal and yeast genetics research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":14,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Saccharomyces cerevisiae; Biology; Cell biology; ESCRT; Vacuolar protein sorting; Mutant; Endosome; Gene; Genetics; Intracellular","score_opus":0.013497033499211808,"score_gpt":0.21725622942008044,"score_spread":0.20375919592086864,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2106896301","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99192756,0.0028775253,0.0026199755,0.00003892863,0.000062016574,0.000491192,0.000013810069,0.0000133839885,0.0019556282],"genre_scores_gemma":[0.99587876,0.00048493527,0.0018579637,0.000037112794,0.000042858635,0.00004292153,0.000056702178,0.000028009292,0.001570738],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9985497,0.0000938832,0.0003199756,0.00039795574,0.00026113933,0.00037735482],"domain_scores_gemma":[0.9994496,0.0000053969125,0.000102459846,0.0002703913,0.00005048965,0.000121669844],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00033370333,0.00019191332,0.00016291656,0.0000760957,0.00007947766,0.00004420423,0.00021092953,0.00015207432,0.000093300194],"category_scores_gemma":[0.000016192827,0.00017786455,0.00004885543,0.00008347926,0.00003108592,0.000013902861,0.00025107752,0.0001406836,0.00003588058],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000063720574,0.00009940856,0.0025415947,0.0001261607,0.000012168741,0.000015763002,0.0001307269,0.000012328889,0.9937522,0.00007020295,0.000102170205,0.0030735452],"study_design_scores_gemma":[0.0005709188,0.00023446578,0.0051212637,0.000031786338,0.000009465253,0.000025493135,0.00019685322,0.0004389509,0.9921669,0.00085818954,0.000118304786,0.00022744673],"about_ca_topic_score_codex":0.00006983998,"about_ca_topic_score_gemma":0.000040327242,"teacher_disagreement_score":0.003951219,"about_ca_system_score_codex":0.00002273511,"about_ca_system_score_gemma":0.000028126098,"threshold_uncertainty_score":0.72531056},"labels":[],"label_agreement":null},{"id":"W2107300931","doi":"10.1128/ec.00085-09","title":"Glycerol-3-Phosphate Acyltransferases Gat1p and Gat2p Are Microsomal Phosphoproteins with Differential Contributions to Polarized Cell Growth","year":2009,"lang":"en","type":"article","venue":"Eukaryotic Cell","topic":"Lipid metabolism and biosynthesis","field":"Biochemistry, Genetics and Molecular Biology","cited_by":25,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Endoplasmic reticulum; Biology; Saccharomyces cerevisiae; Biochemistry; Cell biology; Acyltransferase; Acyltransferases; Organelle; Cell fractionation; Signal transduction; Enzyme; Biosynthesis; Yeast","score_opus":0.0027647293378224376,"score_gpt":0.19388495631475286,"score_spread":0.19112022697693043,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2107300931","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99295676,0.0015168856,0.003764478,0.0005606619,0.00013224808,0.000507344,0.00025162112,0.000037434693,0.00027259468],"genre_scores_gemma":[0.9966666,0.00024849855,0.0009245558,0.0008004856,0.00032919834,0.000017621956,0.00013613437,0.00002975946,0.00084712467],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.998499,0.000056000885,0.00025332902,0.0005038076,0.00018154377,0.00050635467],"domain_scores_gemma":[0.9990982,0.000018113966,0.00007949832,0.00035858442,0.00012950743,0.0003161399],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00007461977,0.00034250316,0.000337103,0.00005263247,0.00022184513,0.000087723085,0.00022232851,0.00017393495,0.00007233621],"category_scores_gemma":[0.000034472436,0.00027577562,0.000102910744,0.00013515413,0.00008811466,0.000010374824,0.00006495929,0.00013148463,0.000027128355],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00090576085,0.0004153052,0.008324462,0.000036689486,0.000039370996,0.0000138229,0.00007208063,0.0000015177053,0.9892823,0.00002663627,0.00042448143,0.00045756987],"study_design_scores_gemma":[0.0021813882,0.00055438443,0.092456765,0.000027047521,0.00012202657,0.000014615132,0.00005213161,0.0000035123946,0.90254986,0.000013388484,0.0016363782,0.00038851082],"about_ca_topic_score_codex":0.000055880293,"about_ca_topic_score_gemma":0.00003235222,"teacher_disagreement_score":0.08673245,"about_ca_system_score_codex":0.00001481219,"about_ca_system_score_gemma":0.00008968144,"threshold_uncertainty_score":0.9999694},"labels":[],"label_agreement":null},{"id":"W2108229064","doi":"10.1128/ec.5.1.148-154.2006","title":"Pyruvate-Phosphate Dikinase of Oxymonads and Parabasalia and the Evolution of Pyrophosphate-Dependent Glycolysis in Anaerobic Eukaryotes","year":2006,"lang":"en","type":"article","venue":"Eukaryotic Cell","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":71,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia; Canadian Institute for Advanced Research","funders":"National Institute of Allergy and Infectious Diseases; Canadian Institutes of Health Research; Genome Canada","keywords":"Phosphofructokinase; Entamoeba histolytica; Biochemistry; Biology; Pyrophosphate; Glycolysis; Enzyme; Pyruvate kinase; Entamoeba; Phosphofructokinase 2; Microbiology","score_opus":0.003436896290048626,"score_gpt":0.19807211862118715,"score_spread":0.19463522233113853,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2108229064","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9904208,0.0065599615,0.0001444729,0.0001258513,0.00008153321,0.0005020249,0.00001066806,0.000015597161,0.0021390596],"genre_scores_gemma":[0.99825525,0.0003650638,0.000303174,0.000019011579,0.00002250137,0.000021739814,0.0000137031475,0.000017182883,0.0009823648],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9988421,0.00006229615,0.00044237968,0.00024214335,0.00020368704,0.00020737019],"domain_scores_gemma":[0.9992922,0.00013205162,0.0001857828,0.0002589122,0.00007475404,0.000056331657],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002721182,0.00017379453,0.00044143907,0.000121422905,0.00006593237,0.000009006164,0.000048252263,0.00007528595,0.00005666668],"category_scores_gemma":[0.000028798104,0.00011832901,0.000079695565,0.0003353311,0.00034435446,0.000069466965,0.000054836124,0.00011310738,0.000004860318],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00054440385,0.0005972357,0.99357855,0.00015562591,0.000067701534,0.000056493027,0.00019079927,0.00017933182,0.0012119346,0.0026769007,0.000056520967,0.00068450597],"study_design_scores_gemma":[0.007211383,0.00029921188,0.9727929,0.00009067186,0.00031415888,0.000019377958,0.0002304171,0.0013603511,0.016167225,0.0013962445,0.000011732377,0.00010629571],"about_ca_topic_score_codex":0.01655083,"about_ca_topic_score_gemma":0.00042935662,"teacher_disagreement_score":0.020785617,"about_ca_system_score_codex":0.00011539752,"about_ca_system_score_gemma":0.000066020526,"threshold_uncertainty_score":0.98999804},"labels":[],"label_agreement":null},{"id":"W2108317419","doi":"10.1128/ec.2.5.949-961.2003","title":"Phosphorylation of the MAPKKK Regulator Ste50p in <i>Saccharomyces cerevisiae</i> : a Casein Kinase I Phosphorylation Site Is Required for Proper Mating Function","year":2003,"lang":"en","type":"article","venue":"Eukaryotic Cell","topic":"Fungal and yeast genetics research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":10,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Université de Montréal; Montreal Clinical Research Institute; Biotechnology Research Institute","funders":"","keywords":"Biology; Phosphorylation; Biochemistry; Casein kinase 2; Phosphorylation cascade; Saccharomyces cerevisiae; MAP kinase kinase kinase; Casein kinase 1; Threonine; Protein phosphorylation; Protein kinase A; Kinase; Cell biology; Serine; Mitogen-activated protein kinase kinase; Yeast","score_opus":0.013428858826689928,"score_gpt":0.235116523518761,"score_spread":0.22168766469207107,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2108317419","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9948013,0.0020165157,0.000520546,0.000113714275,0.00021679855,0.00081651955,0.000026612674,0.0000058939827,0.0014820897],"genre_scores_gemma":[0.995152,0.000073051015,0.0007799542,0.000098740195,0.00009952808,0.000053963544,0.00005465661,0.000027956146,0.0036601545],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99870694,0.00011184258,0.00034171168,0.00034907428,0.00022978768,0.000260651],"domain_scores_gemma":[0.99924195,0.00002225194,0.00015485052,0.00038132136,0.00014600337,0.000053641306],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00040262763,0.0001567198,0.00015274009,0.000044224722,0.000094758754,0.000023392606,0.00013361823,0.00013300794,0.00007789294],"category_scores_gemma":[0.000078560704,0.00012345987,0.000116186944,0.00019246955,0.000048967868,0.000009160643,0.00006168495,0.00009131403,0.000012455262],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00027233362,0.00014727062,0.041067597,0.0002778101,0.000018903715,9.4614455e-7,0.00023578492,0.00047266853,0.95414615,0.00012789981,0.0011280718,0.002104573],"study_design_scores_gemma":[0.0009597798,0.00027039144,0.01791645,0.000054276523,0.000023430468,0.0000034372854,0.00015068833,0.0010632499,0.9747198,0.00016525172,0.004503539,0.0001696743],"about_ca_topic_score_codex":0.000023912213,"about_ca_topic_score_gemma":0.000025403948,"teacher_disagreement_score":0.023151148,"about_ca_system_score_codex":0.000033536064,"about_ca_system_score_gemma":0.00011840503,"threshold_uncertainty_score":0.50345474},"labels":[],"label_agreement":null},{"id":"W2108379836","doi":"10.1128/ec.00235-10","title":"Mid1, a Mechanosensitive Calcium Ion Channel, Affects Growth, Development, and Ascospore Discharge in the Filamentous Fungus Gibberella zeae","year":2011,"lang":"en","type":"article","venue":"Eukaryotic Cell","topic":"Fungal and yeast genetics research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":53,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"York University","funders":"Natural Sciences and Engineering Research Council of Canada; U.S. Department of Agriculture; National Science Foundation","keywords":"Ascospore; Biology; Mutant; Neurospora crassa; Conidium; Gibberella zeae; Microbiology; Fusarium; Botany; Biochemistry; Spore; Gene","score_opus":0.025583841925200648,"score_gpt":0.23647386020169497,"score_spread":0.21089001827649434,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2108379836","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9892043,0.0011571379,0.0001944848,0.00006789141,0.00014486251,0.00041798438,0.000012367521,0.000008146711,0.008792821],"genre_scores_gemma":[0.99763274,0.0001843736,0.00028726153,0.0002108377,0.00011926002,0.000033410764,0.00008595822,0.000025063388,0.0014210921],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9986187,0.00013645011,0.00016419534,0.00042644382,0.00021646182,0.0004377105],"domain_scores_gemma":[0.999498,0.000026329084,0.00005185196,0.0002564844,0.0000523876,0.00011491831],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00032005893,0.00021308106,0.00015220052,0.00007076699,0.00010400508,0.000027727081,0.00022590367,0.00014038545,0.000033504515],"category_scores_gemma":[0.00003066412,0.0001591345,0.00004962783,0.0001424237,0.00007764255,0.0000041374337,0.00020767345,0.00017650715,0.000041530773],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00066295575,0.001190795,0.024336716,0.00040336323,0.00013545272,0.00041322474,0.009799152,0.000009431586,0.9550754,0.0006147575,0.0048336904,0.0025250548],"study_design_scores_gemma":[0.00070074724,0.00039807058,0.07799508,0.00003078648,0.000014164794,0.000040659626,0.0006099949,0.000060765407,0.9191648,0.0001902524,0.00051491894,0.0002798134],"about_ca_topic_score_codex":0.00006168591,"about_ca_topic_score_gemma":0.00009230809,"teacher_disagreement_score":0.05365836,"about_ca_system_score_codex":0.000016245538,"about_ca_system_score_gemma":0.000070925875,"threshold_uncertainty_score":0.6489317},"labels":[],"label_agreement":null},{"id":"W2109000524","doi":"10.1128/ec.00258-06","title":"Reconstructing the Mosaic Glycolytic Pathway of the Anaerobic Eukaryote <i>Monocercomonoides</i>","year":2006,"lang":"en","type":"article","venue":"Eukaryotic Cell","topic":"Protist diversity and phylogeny","field":"Biochemistry, Genetics and Molecular Biology","cited_by":39,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University; University of Calgary","funders":"Canadian Institutes of Health Research; Genome Alberta; Wellcome Trust; Genome Canada","keywords":"Eukaryote; Biology; Biochemistry; Aldolase A; Phosphoglycerate kinase; Phosphoglycerate mutase; Pyruvate kinase; Glycolysis; Enzyme; Gene; Genome","score_opus":0.005160273554911216,"score_gpt":0.1722664402234904,"score_spread":0.1671061666685792,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2109000524","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9887201,0.0008069213,0.00014596747,0.0001949833,0.00037853103,0.00032030404,0.000046270612,0.000010953402,0.009375945],"genre_scores_gemma":[0.99686587,0.000027688537,0.00040176406,0.00027859415,0.00019783035,0.000005826948,0.000034447618,0.00001598148,0.0021719849],"study_design_codex":"observational","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99895227,0.00011807701,0.0002500197,0.00027204142,0.00014355584,0.00026402663],"domain_scores_gemma":[0.99909884,0.000036143436,0.0001788269,0.00059805874,0.00005075278,0.00003735537],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00022404139,0.00016335657,0.00014532145,0.000019593766,0.00024871033,0.000021599284,0.0005578633,0.00011377315,0.000049727463],"category_scores_gemma":[0.00002765607,0.000109670706,0.00018488923,0.00017250552,0.00023205677,0.0000045684515,0.0002667103,0.0001622939,0.000019098727],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008482329,0.00018800992,0.70862013,0.0000892729,0.000065615146,0.000008731706,0.00011814151,0.0010976095,0.2746886,0.00068677054,0.012283753,0.0020685438],"study_design_scores_gemma":[0.00075486506,0.00014076455,0.15595219,0.000026875248,0.00006551293,0.00004575856,0.00014719354,0.00019380008,0.8372788,0.0011693449,0.00393164,0.000293267],"about_ca_topic_score_codex":0.00025052234,"about_ca_topic_score_gemma":0.00007938495,"teacher_disagreement_score":0.5625902,"about_ca_system_score_codex":0.000018385703,"about_ca_system_score_gemma":0.00010593147,"threshold_uncertainty_score":0.44722414},"labels":[],"label_agreement":null},{"id":"W2109314188","doi":"10.1128/ec.2.5.1069-1075.2003","title":"Bacterial Catalase in the Microsporidian <i>Nosema locustae</i> : Implications for Microsporidian Metabolism and Genome Evolution","year":2003,"lang":"en","type":"article","venue":"Eukaryotic Cell","topic":"Parasitic Infections and Diagnostics","field":"Immunology and Microbiology","cited_by":45,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia; Canadian Institute for Advanced Research","funders":"Wellcome Trust; National Science Foundation","keywords":"Biology; Genome; Catalase; Gene; Microsporidia; Genetics; Horizontal gene transfer; Peroxisome; Phylogenetics; Microbiology; Spore; Enzyme; Biochemistry","score_opus":0.008085792517944694,"score_gpt":0.22322255475390215,"score_spread":0.21513676223595746,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2109314188","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9905579,0.0035126344,0.0016495603,0.00044557394,0.0009902404,0.00079415704,0.0004025064,0.000026088566,0.0016213033],"genre_scores_gemma":[0.9982216,0.00011762148,0.00033113346,0.00024424464,0.0000774446,0.00010526344,0.0003958904,0.000016196404,0.0004906034],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9988854,0.00012530376,0.00028114213,0.0002888311,0.000017526208,0.00040178],"domain_scores_gemma":[0.99916095,0.0003383822,0.00008339078,0.00032630374,0.000057683985,0.000033267625],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00037834232,0.00017365186,0.00020652082,0.00009428745,0.00032637757,0.00003626218,0.00013888667,0.00016539384,0.00008824132],"category_scores_gemma":[0.00011876019,0.00014520704,0.000072681345,0.00018681165,0.00016056905,0.000075699136,0.000020382215,0.00016982005,0.000120943805],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010316997,0.001036962,0.07957133,0.00007742806,0.0000754086,0.000010261719,0.0018395308,0.00003426773,0.8703458,0.03910091,0.00739764,0.00040734516],"study_design_scores_gemma":[0.002655578,0.00009872884,0.8450463,0.000008713518,0.00013524204,0.00023615577,0.00035346873,7.8545554e-7,0.023155782,0.001857338,0.12613685,0.00031506963],"about_ca_topic_score_codex":0.0002367718,"about_ca_topic_score_gemma":0.00015766767,"teacher_disagreement_score":0.84718996,"about_ca_system_score_codex":0.0000580037,"about_ca_system_score_gemma":0.00013112427,"threshold_uncertainty_score":0.59213716},"labels":[],"label_agreement":null},{"id":"W2109352225","doi":"10.1128/ec.3.5.1198-1205.2004","title":"Nucleus-Encoded Genes for Plastid-Targeted Proteins in <i>Helicosporidium</i> : Functional Diversity of a Cryptic Plastid in a Parasitic Alga","year":2004,"lang":"en","type":"article","venue":"Eukaryotic Cell","topic":"Genomics and Phylogenetic Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":46,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia; Canadian Institute for Advanced Research","funders":"Canadian Institutes of Health Research; Michael Smith Health Research BC; Joint Genome Institute; U.S. Department of Energy","keywords":"Plastid; Biology; Apicoplast; Chloroplast; Genetics; Gene","score_opus":0.012681406678220855,"score_gpt":0.20324104927293468,"score_spread":0.19055964259471384,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2109352225","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9968792,0.00088303676,0.0011258003,0.000059195518,0.00018341963,0.00055945286,0.000070190625,0.0000037715336,0.00023593349],"genre_scores_gemma":[0.9968639,0.00012962792,0.0026297676,0.00006758544,0.00008808701,0.000057190344,0.00005471036,0.000018743951,0.000090374306],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99885297,0.000025939327,0.00030603202,0.00037559465,0.00012635808,0.00031309703],"domain_scores_gemma":[0.9995384,0.00003728969,0.00009985875,0.0001943248,0.00006729156,0.00006283817],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013392372,0.00019018013,0.0002522048,0.00008907074,0.000083310006,0.0000063546313,0.00016050217,0.00011549717,0.000012093967],"category_scores_gemma":[0.000049634345,0.00019811776,0.00010734784,0.0001373881,0.0000793028,0.0000018257489,0.00015922805,0.00007694032,0.000005856469],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00052221003,0.00058590993,0.1792675,0.00013169687,0.000053066633,0.000010772123,0.00029828065,0.01719456,0.8015626,0.000043806696,0.0002165619,0.00011303595],"study_design_scores_gemma":[0.0046384092,0.00077503873,0.6379394,0.00003992078,0.00003970466,0.000005170198,0.00015944168,0.00020573728,0.35509828,0.0005080789,0.0002668006,0.0003239957],"about_ca_topic_score_codex":0.00021102958,"about_ca_topic_score_gemma":0.00031025973,"teacher_disagreement_score":0.45867193,"about_ca_system_score_codex":0.000053952725,"about_ca_system_score_gemma":0.00016552063,"threshold_uncertainty_score":0.8079008},"labels":[],"label_agreement":null},{"id":"W2109704281","doi":"10.1128/ec.00346-06","title":"<i>Drosophila melanogaster Thor</i> and Response to <i>Candida albicans</i> Infection","year":2007,"lang":"en","type":"article","venue":"Eukaryotic Cell","topic":"Invertebrate Immune Response Mechanisms","field":"Immunology and Microbiology","cited_by":27,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Biotechnology Research Institute","funders":"Canadian Institutes of Health Research; Health Research","keywords":"Biology; Drosophila melanogaster; Candida albicans; Melanogaster; Corpus albicans; Innate immune system; Mutant; Gene; Cell biology; Regulator; Microbiology; Genetics; Immune system","score_opus":0.006715088654051543,"score_gpt":0.21999636359626176,"score_spread":0.21328127494221022,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2109704281","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9893404,0.000651038,0.0020880299,0.00052945,0.001257044,0.000396268,0.0000129330365,0.00012594947,0.005598875],"genre_scores_gemma":[0.98162335,0.000036418376,0.0002703941,0.0018787638,0.00004845645,0.0000128623515,0.000025116131,0.00003916768,0.016065473],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9981876,0.0003903948,0.00034545016,0.00041389442,0.0000629052,0.00059973315],"domain_scores_gemma":[0.99898803,0.00039728882,0.000083345105,0.00038848034,0.000057978596,0.00008484581],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0014477635,0.00025912435,0.00028338822,0.0002586736,0.0002237804,0.000029460229,0.00015313998,0.00026007407,0.00072725024],"category_scores_gemma":[0.000096690914,0.00024483755,0.00006522704,0.0002589633,0.00011473381,0.00009333456,0.00015955864,0.00031806447,0.002588924],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0035208876,0.000111654794,0.00460419,0.000016730197,0.00003731812,0.000049275408,0.0007548266,0.000003780645,0.98459446,0.00018685892,0.0037112394,0.00240875],"study_design_scores_gemma":[0.0020124149,0.0008889231,0.09910448,0.000036963735,0.00005945373,0.0003621357,0.00015464076,0.0000042208308,0.8258555,0.00016287719,0.070950575,0.00040779903],"about_ca_topic_score_codex":0.00017362674,"about_ca_topic_score_gemma":0.00007161969,"teacher_disagreement_score":0.15873897,"about_ca_system_score_codex":0.00009131613,"about_ca_system_score_gemma":0.00006991382,"threshold_uncertainty_score":0.99841857},"labels":[],"label_agreement":null},{"id":"W2110271691","doi":"10.1128/ec.00265-08","title":"Transcriptional Profiling Identifies a Role for BrlA in the Response to Nitrogen Depletion and for StuA in the Regulation of Secondary Metabolite Clusters in <i>Aspergillus fumigatus</i>","year":2008,"lang":"en","type":"article","venue":"Eukaryotic Cell","topic":"Fungal and yeast genetics research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":120,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"National Institute of Allergy and Infectious Diseases; Canadian Institutes of Health Research; National Institutes of Health; McGill University; Burroughs Wellcome Fund","keywords":"Conidiation; Biology; Mutant; Aspergillus fumigatus; Gene; Ribosomal protein; Gene expression; Wild type; Regulation of gene expression; Downregulation and upregulation; Aspergillus nidulans; Cell biology; Molecular biology; Microbiology; Genetics; RNA; Ribosome","score_opus":0.017189747393522924,"score_gpt":0.2581430026423681,"score_spread":0.2409532552488452,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2110271691","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99646217,0.0015957609,0.00034895886,0.0003926903,0.000028804083,0.0010109659,0.00006415753,0.0000012118843,0.000095274074],"genre_scores_gemma":[0.9986044,0.000076129094,0.00063881103,0.00019927858,0.00004397065,0.00017839186,0.00011993668,0.000009287995,0.00012980483],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9990309,0.00021465983,0.00022205802,0.00020460584,0.00014732055,0.0001804671],"domain_scores_gemma":[0.99962556,0.000121272446,0.000030829717,0.00014886608,0.00005115444,0.000022306029],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010237269,0.00008358467,0.000106580555,0.000095341835,0.000054056378,0.000013047529,0.00014988691,0.00006353409,0.0000018857154],"category_scores_gemma":[0.000076825716,0.00006116205,0.000053926266,0.0001485076,0.000055781155,0.0000058069704,0.000026651782,0.000077135635,3.9844144e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0020520126,0.00009571963,0.013168901,0.000070531336,0.0000065981044,0.0000012295335,0.0017503401,0.0007901093,0.9816441,0.00005405593,0.00009093095,0.00027548225],"study_design_scores_gemma":[0.0026432143,0.000508021,0.5520108,0.000023153565,0.000014884791,0.000020304511,0.0023677961,0.0020459571,0.43787345,0.00096027955,0.0013737108,0.00015844435],"about_ca_topic_score_codex":0.000027260532,"about_ca_topic_score_gemma":0.00018609673,"teacher_disagreement_score":0.5437706,"about_ca_system_score_codex":0.000010756151,"about_ca_system_score_gemma":0.00007761344,"threshold_uncertainty_score":0.24941161},"labels":[],"label_agreement":null},{"id":"W2111516383","doi":"10.1128/ec.4.12.2044-2056.2005","title":"An <i>Ustilago maydis</i> Septin Is Required for Filamentous Growth in Culture and for Full Symptom Development on Maize","year":2005,"lang":"en","type":"article","venue":"Eukaryotic Cell","topic":"Fungal and yeast genetics research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":63,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canada's Michael Smith Genome Sciences Centre; University of British Columbia","funders":"Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research","keywords":"Biology; Ustilago; Dikaryon; Cell biology; Septin; Mutant; Budding; Morphogenesis; Gene; Hypha; Genetics; Cell division; Microbiology; Cytokinesis; Cell","score_opus":0.014113219501732598,"score_gpt":0.2763231425500037,"score_spread":0.26220992304827107,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2111516383","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9949687,0.0006725285,0.0011821111,0.0003101573,0.0000753537,0.0008439466,0.000095151896,0.000011528823,0.0018405166],"genre_scores_gemma":[0.9762534,0.00015373247,0.014314255,0.0007812965,0.0002861302,0.00013706014,0.0003029728,0.00003538633,0.0077357977],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9987483,0.000025966261,0.00021353598,0.00047347203,0.00014103066,0.0003976631],"domain_scores_gemma":[0.99951005,0.000021141845,0.00004279642,0.0002043653,0.000078533325,0.00014314103],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00018415834,0.0001873173,0.00014854826,0.000048914462,0.00008536827,0.000039023045,0.00018043452,0.00015619275,0.000026329002],"category_scores_gemma":[0.000023911336,0.00016919804,0.000056262674,0.000059157795,0.000039025803,0.000004711642,0.000067294255,0.000075493124,0.000013856408],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00090487965,0.0005237929,0.0025170248,0.00025409355,0.00003293441,0.0000032158446,0.00068190484,0.00014856506,0.9675473,0.00006842656,0.018804345,0.008513509],"study_design_scores_gemma":[0.0024184329,0.0014898197,0.0039368263,0.00003272041,0.000013974899,0.000005896433,0.00013646022,0.0011742765,0.9464127,0.00010761415,0.043920122,0.0003511964],"about_ca_topic_score_codex":0.0000031616194,"about_ca_topic_score_gemma":0.00003239715,"teacher_disagreement_score":0.025115775,"about_ca_system_score_codex":0.000033947534,"about_ca_system_score_gemma":0.000081750666,"threshold_uncertainty_score":0.6899696},"labels":[],"label_agreement":null},{"id":"W2111537023","doi":"10.1128/ec.00050-13","title":"Characterization of <i>Tt</i> ALV2, an Essential Charged Repeat Motif Protein of the Tetrahymena thermophila Membrane Skeleton","year":2013,"lang":"en","type":"article","venue":"Eukaryotic Cell","topic":"Protist diversity and phylogeny","field":"Biochemistry, Genetics and Molecular Biology","cited_by":22,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of New Brunswick","funders":"","keywords":"Tetrahymena; Biology; Cytoskeleton; Cell biology; Cytokinesis; Microtubule; Basal body; Membrane protein; Cell division; Genetics; Cell; Membrane; Gene","score_opus":0.004013680324486637,"score_gpt":0.17475709353842472,"score_spread":0.1707434132139381,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2111537023","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9979153,0.000049459657,0.00016805393,0.00007260862,0.00017068336,0.0006367367,0.000045570094,0.000006278687,0.00093525805],"genre_scores_gemma":[0.99811035,0.000014387134,0.00007262799,0.000059088423,0.00013629191,0.000011259932,0.00017184953,0.000014489103,0.0014096274],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9991623,0.00010321426,0.00020639831,0.00023327961,0.00013651101,0.00015829073],"domain_scores_gemma":[0.9991965,0.000004000773,0.00018772185,0.0004693824,0.00008902186,0.00005336087],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000099974364,0.00012504762,0.00014368554,0.000020857902,0.00007203806,0.000012593147,0.00032370677,0.00011618904,0.0002118463],"category_scores_gemma":[0.000017134344,0.00009991269,0.00010108386,0.00008817253,0.00013587931,0.0000101698415,0.00009637965,0.00007409087,0.000012450923],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000026317568,0.00014574055,0.020693786,0.000092645445,0.00001888846,4.613783e-7,0.00013837908,0.000006128983,0.97862804,0.000026140939,0.000043813012,0.00017968632],"study_design_scores_gemma":[0.00029715593,0.0001317092,0.18500672,0.000015783145,0.000017026474,0.0000014065237,0.00001805474,0.000026040376,0.81431276,0.000029472429,0.00005429114,0.00008958072],"about_ca_topic_score_codex":0.000072713,"about_ca_topic_score_gemma":0.0000042429065,"teacher_disagreement_score":0.16431525,"about_ca_system_score_codex":0.000004403052,"about_ca_system_score_gemma":0.00005252473,"threshold_uncertainty_score":0.40743214},"labels":[],"label_agreement":null},{"id":"W2112787803","doi":"10.1128/ec.3.5.1101-1110.2004","title":"Transcriptional Transitions during <i>Dictyostelium</i> Spore Germination","year":2004,"lang":"en","type":"article","venue":"Eukaryotic Cell","topic":"Cellular Mechanics and Interactions","field":"Biochemistry, Genetics and Molecular Biology","cited_by":27,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Windsor","funders":"Eunice Kennedy Shriver National Institute of Child Health and Human Development; National Institute of Child Health and Human Development","keywords":"Germination; Spore; Biology; Spore germination; Dictyostelium discoideum; Dormancy; Cell biology; Mutant; Microbiology; Gene; Botany; Genetics","score_opus":0.005272210712644675,"score_gpt":0.20165140110723817,"score_spread":0.1963791903945935,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2112787803","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97832644,0.00040116248,0.014782016,0.0008193896,0.00038225748,0.0001633786,0.000042733107,0.000026946704,0.0050557028],"genre_scores_gemma":[0.99530965,0.00009999867,0.0005675648,0.00019438683,0.00024966677,0.000015511072,0.00041987968,0.000023527047,0.003119816],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9992309,0.00001555264,0.00017779371,0.00026059058,0.00012693083,0.00018820251],"domain_scores_gemma":[0.9996181,0.000002541417,0.000039728286,0.00020097368,0.00005793109,0.000080684105],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000058394253,0.0001261904,0.000082376486,0.000051874584,0.00014294077,0.000022041622,0.000097643504,0.000093393886,0.00020328567],"category_scores_gemma":[0.00000595816,0.00013853506,0.00013755269,0.00008458552,0.000016853408,0.000008592059,0.000016319636,0.00010703716,0.00007004691],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00002821437,0.00020648459,0.000098945085,0.00002225598,0.000014057983,0.000011848237,0.00010079091,0.0007012553,0.9978736,0.0006275757,0.00019001785,0.00012497116],"study_design_scores_gemma":[0.0016518334,0.0002015283,0.009282999,0.000025970738,0.00004592842,0.00014141735,0.00013865075,0.000097279815,0.97985065,0.0005267975,0.007733735,0.00030318383],"about_ca_topic_score_codex":0.000017977924,"about_ca_topic_score_gemma":0.00004421242,"teacher_disagreement_score":0.018022908,"about_ca_system_score_codex":0.000060815157,"about_ca_system_score_gemma":0.000063020045,"threshold_uncertainty_score":0.56492954},"labels":[],"label_agreement":null},{"id":"W2113627544","doi":"10.1128/ec.00183-06","title":"Transcriptional Activation Domains of the <i>Candida albicans</i> Gcn4p and Gal4p Homologs","year":2006,"lang":"en","type":"article","venue":"Eukaryotic Cell","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":26,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Biotechnology Research Institute; McGill University","funders":"","keywords":"Saccharomyces cerevisiae; Biology; Candida albicans; Transcription factor; Transcription (linguistics); DNA-binding domain; Genetics; Yeast; Gene","score_opus":0.005074498948036181,"score_gpt":0.2009853920840001,"score_spread":0.1959108931359639,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2113627544","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.980498,0.00024426763,0.00053651223,0.0008001299,0.0000708493,0.00022365851,0.000013074887,0.00001411725,0.017599357],"genre_scores_gemma":[0.9945171,0.000022870945,0.00020726708,0.000286831,0.000074927004,0.0000035118055,0.000017077076,0.000008268772,0.0048621534],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99922544,0.000035972775,0.00019933018,0.00017207464,0.00022850205,0.00013866184],"domain_scores_gemma":[0.9995659,0.000066233886,0.00006138395,0.00021545615,0.000050850493,0.00004015939],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001263522,0.00009099286,0.00016873682,0.0000265728,0.00007256092,0.0000057110187,0.00005577944,0.00005960093,0.000189908],"category_scores_gemma":[0.000020960646,0.000061949104,0.000088047134,0.00012658701,0.0002038235,0.00004604829,0.000013007282,0.00012460296,0.0000043623363],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00019169663,0.00029762456,0.85412985,0.00015908743,0.000012816311,0.00000461082,0.00012787078,0.000008263546,0.14093804,0.0015844759,0.0022320116,0.00031364034],"study_design_scores_gemma":[0.0008428081,0.00007503863,0.9737189,0.00004249519,0.000050764163,0.000007882538,0.00008218864,0.000028977904,0.023454145,0.0007844096,0.0008526485,0.000059781458],"about_ca_topic_score_codex":0.00024046603,"about_ca_topic_score_gemma":0.000102301354,"teacher_disagreement_score":0.11958901,"about_ca_system_score_codex":0.00003788175,"about_ca_system_score_gemma":0.00008333672,"threshold_uncertainty_score":0.2526211},"labels":[],"label_agreement":null},{"id":"W2114390867","doi":"10.1128/ec.00087-07","title":"Regulation of Phosphoinositide Levels by the Phospholipid Transfer Protein Sec14p Controls Cdc42p/p21-Activated Kinase-Mediated Cell Cycle Progression at Cytokinesis","year":2007,"lang":"en","type":"article","venue":"Eukaryotic Cell","topic":"Cellular transport and secretion","field":"Biochemistry, Genetics and Molecular Biology","cited_by":13,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University","funders":"National Institute of General Medical Sciences; Canadian Institutes of Health Research; Nova Scotia Health Research Foundation","keywords":"Cytokinesis; Biology; Cell biology; Phosphatidylinositol; Septin; GTPase; CDC42; Kinase; Cell division; Biochemistry; Cell","score_opus":0.0059937541276619535,"score_gpt":0.20874083526944492,"score_spread":0.20274708114178297,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2114390867","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9836789,0.0013850561,0.012095269,0.00009730682,0.00012943806,0.0011170983,0.00011105819,0.00003617174,0.0013497078],"genre_scores_gemma":[0.99416906,0.000053238113,0.00015679581,0.0001018756,0.00011134665,0.000036476602,0.0035410284,0.0000571704,0.0017730201],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9980282,0.00009141098,0.0005611415,0.0004824882,0.0003799303,0.00045678357],"domain_scores_gemma":[0.99902433,0.000046350826,0.00017989248,0.0004713411,0.00013876108,0.00013930655],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0004979153,0.00031832076,0.00029473964,0.000048487764,0.0001699993,0.00001807167,0.00023759702,0.0003106601,0.0002590053],"category_scores_gemma":[0.000019536794,0.00025278606,0.0002051682,0.00023154324,0.00015454213,0.000012686493,0.000039905728,0.00016670382,0.0000196455],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0009759578,0.00029158095,0.0055988706,0.00008847189,0.00003048368,0.000006870375,0.00013424535,0.00006200397,0.991939,0.000006032732,0.00021844375,0.0006480328],"study_design_scores_gemma":[0.0021035394,0.000321724,0.05075629,0.000047744412,0.0000607587,0.000004798858,0.00005023488,0.00014822806,0.94253284,0.0000118235885,0.003670323,0.00029172626],"about_ca_topic_score_codex":0.000095593605,"about_ca_topic_score_gemma":0.00005012915,"teacher_disagreement_score":0.049406197,"about_ca_system_score_codex":0.0000546473,"about_ca_system_score_gemma":0.00006319128,"threshold_uncertainty_score":0.99999243},"labels":[],"label_agreement":null},{"id":"W2114819052","doi":"10.1128/ec.3.3.646-662.2004","title":"RasC Plays a Role in Transduction of Temporal Gradient Information in the Cyclic-AMP Wave of<i>Dictyostelium discoideum</i>","year":2004,"lang":"en","type":"article","venue":"Eukaryotic Cell","topic":"Cellular Mechanics and Interactions","field":"Biochemistry, Genetics and Molecular Biology","cited_by":37,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"National Institute of General Medical Sciences; Eunice Kennedy Shriver National Institute of Child Health and Human Development; Medical Research Council; National Institutes of Health","keywords":"Biology; Dictyostelium discoideum; Chemotaxis; Cytoskeleton; Pseudopodia; Cell biology; Dictyostelium; Myosin; Actin; Motility; Transduction (biophysics); Biophysics; Myosin light-chain kinase; Neuroscience; Cell; Genetics; Gene","score_opus":0.007234110918227056,"score_gpt":0.2073894114820173,"score_spread":0.20015530056379024,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2114819052","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9950692,0.00019439872,0.0024728472,0.00015310921,0.00014357161,0.00023390254,0.000016794997,0.0000022693007,0.0017138754],"genre_scores_gemma":[0.9992935,0.00011854668,0.00020597105,0.00006426266,0.000032609685,0.00001288192,0.00022849358,0.0000063398606,0.00003738354],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9992247,0.000042185937,0.000368659,0.000114029026,0.000119070355,0.00013130506],"domain_scores_gemma":[0.9995929,0.000008888784,0.0001204259,0.00022610907,0.000029570801,0.000022091066],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00021781118,0.00009341602,0.000119915436,0.000090431044,0.000020106472,0.000008284836,0.000109761466,0.00007373743,0.000015757105],"category_scores_gemma":[0.000017541872,0.00007666854,0.000087323475,0.0001532574,0.00002768375,0.000016979531,0.000023416704,0.00010997421,0.000004640293],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00019082113,0.00077957346,0.0052510314,0.000111921676,0.000021717195,0.0000038656735,0.005259713,0.00581333,0.9804902,0.00086452375,0.00018408055,0.0010291887],"study_design_scores_gemma":[0.0021676912,0.0005434737,0.018876482,0.00007369726,0.000026728307,0.00003910721,0.003117198,0.000558489,0.9692458,0.0009019418,0.00422313,0.00022625556],"about_ca_topic_score_codex":0.00051524356,"about_ca_topic_score_gemma":0.00063843944,"teacher_disagreement_score":0.013625451,"about_ca_system_score_codex":0.000023480241,"about_ca_system_score_gemma":0.000049293936,"threshold_uncertainty_score":0.31264523},"labels":[],"label_agreement":null},{"id":"W2115070230","doi":"10.1128/ec.4.1.190-201.2005","title":"Transcriptional Network of Multiple Capsule and Melanin Genes Governed by the<i>Cryptococcus neoformans</i>Cyclic AMP Cascade","year":2005,"lang":"en","type":"article","venue":"Eukaryotic Cell","topic":"Fungal Infections and Studies","field":"Medicine","cited_by":183,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institute of Allergy and Infectious Diseases; National Institutes of Health; Genome Canada; Howard Hughes Medical Institute","keywords":"Cryptococcus neoformans; Melanin; Biology; Gene; Mutant; Virulence; Cell biology; RNA interference; Gene expression; Microbiology; Biochemistry; RNA","score_opus":0.012614682696709682,"score_gpt":0.22751047336342367,"score_spread":0.214895790666714,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2115070230","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.977731,0.012315822,0.0004386862,0.0015867283,0.00020138995,0.00041530302,0.00004399748,0.00003600864,0.007231102],"genre_scores_gemma":[0.9923931,0.0011178949,0.0007931926,0.00047870944,0.0003237022,0.000025789133,0.000028096367,0.000016452756,0.0048231077],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99910694,0.00002902958,0.00026259018,0.00016779912,0.00018075288,0.0002528781],"domain_scores_gemma":[0.99954146,0.000094278446,0.00006711471,0.00017197072,0.000045553246,0.00007964943],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014298724,0.00014581248,0.00024966086,0.0000192729,0.00017666088,0.0000104501805,0.000055057004,0.00006325212,0.00020289209],"category_scores_gemma":[0.000017078843,0.00010164125,0.000092233146,0.00012330715,0.00012787126,0.00005651062,0.000027425067,0.00015639552,0.000039697774],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00040360226,0.0012263589,0.48462874,0.00040842537,0.00049770705,0.000015175698,0.003504131,0.0023569418,0.23698243,0.000684727,0.25296623,0.016325539],"study_design_scores_gemma":[0.0041237287,0.00042443242,0.6782145,0.00008147412,0.00031634216,0.00012701357,0.0003803036,0.0026572575,0.027617449,0.00009885203,0.28562304,0.0003355902],"about_ca_topic_score_codex":0.00028412472,"about_ca_topic_score_gemma":0.00026135513,"teacher_disagreement_score":0.20936498,"about_ca_system_score_codex":0.00004240493,"about_ca_system_score_gemma":0.000026452128,"threshold_uncertainty_score":0.41448098},"labels":[],"label_agreement":null},{"id":"W2115113783","doi":"10.1128/ec.00097-10","title":"The Saccharomyces cerevisiae Anaphase-Promoting Complex Interacts with Multiple Histone-Modifying Enzymes To Regulate Cell Cycle Progression","year":2010,"lang":"en","type":"article","venue":"Eukaryotic Cell","topic":"Microtubule and mitosis dynamics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":26,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"Canadian Institutes of Health Research","keywords":"Saccharomyces cerevisiae; Biology; Cell biology; Anaphase; Histone; Enzyme; Cell cycle; Anaphase-promoting complex; Genetics; Biochemistry; Yeast; Cell; Gene","score_opus":0.007337472683823863,"score_gpt":0.26312810053988367,"score_spread":0.2557906278560598,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2115113783","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9961792,0.0006000879,0.0005118849,0.00027897867,0.00027453975,0.0005056792,0.000011670087,0.000034761048,0.0016031626],"genre_scores_gemma":[0.992979,0.00006102993,0.0052766055,0.0002090148,0.00022832351,0.00002897005,0.00010562072,0.00005260886,0.0010588538],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9985196,0.00006148418,0.00028401613,0.00050873606,0.0001718918,0.00045425558],"domain_scores_gemma":[0.9988593,0.000052517993,0.00017556905,0.00064083433,0.00009078606,0.00018098277],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002377884,0.000265336,0.00018986221,0.000045126537,0.0003782936,0.00011668041,0.0004297896,0.00012211483,0.000030773157],"category_scores_gemma":[0.00005237104,0.00018528836,0.00008991576,0.000111490845,0.000099717894,0.00001006893,0.00023277118,0.00025225576,0.000034957826],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000114702925,0.00014897835,0.005419044,0.000064159416,0.00001828427,0.000008879143,0.00024501258,0.00007451015,0.98445314,0.000010353889,0.0018500641,0.0075928415],"study_design_scores_gemma":[0.0009385906,0.0004080105,0.010017992,0.00007244403,0.000030585095,0.00003127392,0.00015475856,0.0027655782,0.9650792,0.000010860008,0.02009973,0.00039101628],"about_ca_topic_score_codex":0.00004570389,"about_ca_topic_score_gemma":0.00033284276,"teacher_disagreement_score":0.01937401,"about_ca_system_score_codex":0.00001995671,"about_ca_system_score_gemma":0.00005974643,"threshold_uncertainty_score":0.755584},"labels":[],"label_agreement":null},{"id":"W2115239411","doi":"10.1128/ec.00013-10","title":"Abundant 5S rRNA-Like Transcripts Encoded by the Mitochondrial Genome in Amoebozoa","year":2010,"lang":"en","type":"article","venue":"Eukaryotic Cell","topic":"Genomics and Phylogenetic Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":29,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Dalhousie University","funders":"National Institute of General Medical Sciences; Canadian Institutes of Health Research; University at Buffalo; National Institutes of Health","keywords":"Biology; Mitochondrial DNA; Ribosomal RNA; Genetics; RNA; Ribosome; Genome; Gene","score_opus":0.0052352193218944115,"score_gpt":0.19626961842394144,"score_spread":0.19103439910204703,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2115239411","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9927763,0.0012219291,0.00016628334,0.00026887856,0.0013802617,0.00040109683,0.000046212954,0.000004540855,0.0037345223],"genre_scores_gemma":[0.9959619,0.0001775712,0.0005403273,0.00046536003,0.00045488746,0.00004126304,0.000049380546,0.000029732426,0.0022795508],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9987896,0.0000518323,0.0002620999,0.0003997373,0.00012723525,0.0003694785],"domain_scores_gemma":[0.999318,0.00002379847,0.000062534586,0.0004777532,0.00003479749,0.000083120525],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015221484,0.00020979086,0.0001785064,0.00002876461,0.00011879116,0.000034448807,0.0004024841,0.0001621169,0.000055676468],"category_scores_gemma":[0.00001890542,0.00016562435,0.00011760036,0.00008051047,0.00014562781,9.1791173e-7,0.00009481512,0.00026241096,0.000028664026],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000046826135,0.00010002394,0.0045320545,0.000009708027,0.000023550952,0.000004019172,0.00028968672,0.00003748867,0.9922755,0.000017229326,0.0023364627,0.0003274908],"study_design_scores_gemma":[0.0037424848,0.00057560875,0.1610671,0.000007072365,0.00008485742,0.00004642543,0.00039963212,0.00010764065,0.50455487,0.00054883683,0.32792175,0.0009437305],"about_ca_topic_score_codex":0.00012347533,"about_ca_topic_score_gemma":0.00071233365,"teacher_disagreement_score":0.4877206,"about_ca_system_score_codex":0.000010210937,"about_ca_system_score_gemma":0.00006658718,"threshold_uncertainty_score":0.6753965},"labels":[],"label_agreement":null},{"id":"W2115318784","doi":"10.1128/ec.00120-08","title":"Rho5p Is Involved in Mediating the Osmotic Stress Response in <i>Saccharomyces cerevisiae</i> , and Its Activity Is Regulated via Msi1p and Npr1p by Phosphorylation and Ubiquitination","year":2008,"lang":"en","type":"article","venue":"Eukaryotic Cell","topic":"Fungal and yeast genetics research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":31,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Biotechnology Research Institute; McGill University","funders":"Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research","keywords":"Biology; Ubiquitin; Phosphorylation; Cell biology; GTPase; Saccharomyces cerevisiae; Regulator; SUMO protein; Proteasome; Signal transduction; GTPase-activating protein; Dephosphorylation; Biochemistry; G protein; Phosphatase; Yeast; Gene","score_opus":0.010955731333245624,"score_gpt":0.23360248166590764,"score_spread":0.222646750332662,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2115318784","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9920163,0.0068275244,0.0000146574475,0.00073835417,0.000022540858,0.00027987963,0.000027438782,0.0000045602,0.00006872505],"genre_scores_gemma":[0.9960981,0.0033453768,0.00003634396,0.00014174516,0.000027333665,0.000011784263,0.000030999236,0.000015306532,0.00029299993],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9988071,0.00022132293,0.00018904537,0.00037230126,0.00018145062,0.00022882635],"domain_scores_gemma":[0.99953234,0.000108460874,0.000073753064,0.00015759292,0.000051320374,0.00007654357],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00043180425,0.00014842789,0.0001454958,0.00006301785,0.00010904508,0.000028125176,0.00009038317,0.00013353344,0.000013610801],"category_scores_gemma":[0.000098810575,0.00012728987,0.000018504494,0.00016566044,0.00009563021,0.000013763613,0.00014872268,0.00015964892,0.000001654127],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00044230098,0.000084387364,0.11388349,0.000094440766,0.000010004515,0.0000075279518,0.00089068664,0.000021192338,0.88212615,0.0000014499104,0.00022250015,0.0022158625],"study_design_scores_gemma":[0.00076570606,0.00017084589,0.30027375,0.000029530596,0.00000602295,0.000008543463,0.00010309614,0.0055263173,0.6928878,0.000031396805,0.00006231951,0.0001346859],"about_ca_topic_score_codex":0.00007915545,"about_ca_topic_score_gemma":0.000042717013,"teacher_disagreement_score":0.18923835,"about_ca_system_score_codex":0.000018927169,"about_ca_system_score_gemma":0.000043991637,"threshold_uncertainty_score":0.519073},"labels":[],"label_agreement":null},{"id":"W2116663183","doi":"10.1128/ec.4.10.1629-1638.2005","title":"Comparative Gene Genealogies Indicate that Two Clonal Lineages of<i>Cryptococcus gattii</i>in British Columbia ResembleStrains from Other Geographical Areas","year":2005,"lang":"en","type":"article","venue":"Eukaryotic Cell","topic":"Fungal Infections and Studies","field":"Medicine","cited_by":119,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"McMaster University; Canada's Michael Smith Genome Sciences Centre; University of British Columbia","funders":"British Columbia Centre for Disease Control; Genome British Columbia; Canada's Michael Smith Genome Sciences Centre","keywords":"Biology; Cryptococcus gattii; Biological dispersal; Population; Genetics; Strain (injury); Genotype; Gene; Molecular epidemiology; Evolutionary biology; Cryptococcus; Demography","score_opus":0.03639762826077904,"score_gpt":0.2890212449172417,"score_spread":0.25262361665646266,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2116663183","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9890297,0.003044835,0.000092091206,0.0003189585,0.00014104237,0.0005083843,0.00020781886,0.00006632508,0.006590821],"genre_scores_gemma":[0.9941468,0.0005402283,0.0035880243,0.00032050034,0.0003265044,0.000050162602,0.000071225746,0.000024906227,0.00093161914],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9983819,0.00009148394,0.00044518136,0.00040575286,0.00030736675,0.00036828223],"domain_scores_gemma":[0.99909574,0.00024935865,0.00014183129,0.00028774954,0.0000898946,0.00013543371],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00018570207,0.00017797436,0.0006541932,0.00012090751,0.00012559208,0.0000670365,0.00012743974,0.000118625016,0.0007409489],"category_scores_gemma":[0.000031542328,0.00022244325,0.00018713967,0.00033567208,0.0003651405,0.00007155076,0.000087467924,0.00036877758,0.00005165672],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000049057104,0.0007784552,0.98914945,0.000037044956,0.00015307663,0.00008453312,0.00041289633,0.000220768,0.00211697,0.000006955729,0.005870035,0.0011207776],"study_design_scores_gemma":[0.0022892752,0.0002332148,0.9896351,0.00014132683,0.00010677501,0.00003164721,0.00037104546,0.00036041412,0.004954106,0.00015337359,0.0015131137,0.00021059232],"about_ca_topic_score_codex":0.026134958,"about_ca_topic_score_gemma":0.089915484,"teacher_disagreement_score":0.06378053,"about_ca_system_score_codex":0.000057175628,"about_ca_system_score_gemma":0.0000826419,"threshold_uncertainty_score":0.9803501},"labels":[],"label_agreement":null},{"id":"W2117814032","doi":"10.1128/ec.00289-09","title":"A Putative P-Type ATPase, Apt1, Is Involved in Stress Tolerance and Virulence in <i>Cryptococcus neoformans</i>","year":2009,"lang":"en","type":"article","venue":"Eukaryotic Cell","topic":"Fungal Infections and Studies","field":"Medicine","cited_by":47,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canada's Michael Smith Genome Sciences Centre; University of British Columbia","funders":"National Institute of Allergy and Infectious Diseases; Canadian Institutes of Health Research; National Institutes of Health; Burroughs Wellcome Fund","keywords":"Cryptococcus neoformans; Virulence; Biology; Microbiology; Cryptococcosis; ATPase; Cryptococcus; Cell biology; Enzyme; Gene; Genetics; Biochemistry","score_opus":0.012881090912962613,"score_gpt":0.2589577588806473,"score_spread":0.2460766679676847,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2117814032","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98803717,0.0017675527,0.00002994033,0.000639213,0.00010373883,0.000417321,0.000008158405,0.000026493706,0.008970419],"genre_scores_gemma":[0.996965,0.00074374396,0.00032631756,0.0013675487,0.000041834523,0.000013344187,0.0000063084162,0.000007986294,0.00052795256],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99908787,0.000026138005,0.0002490853,0.00025039594,0.0001202986,0.00026620115],"domain_scores_gemma":[0.99961954,0.00006339026,0.00004471041,0.00014864563,0.000051625837,0.00007208571],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000109200635,0.00015159512,0.0002931126,0.00013134042,0.000051893436,0.0000142395,0.00004411527,0.000060070044,0.000042379957],"category_scores_gemma":[0.000030800795,0.00013381032,0.00003103816,0.00043277306,0.000063248124,0.000106034706,0.000029392548,0.00024179867,0.000029766865],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002799501,0.00067446113,0.9862391,0.0001853588,0.000013135468,0.00028263585,0.0049541276,0.00024873967,0.0019436921,0.00010500969,0.001562084,0.003511757],"study_design_scores_gemma":[0.0020262282,0.00062260265,0.988616,0.00027254946,0.000018805871,0.000009172583,0.0007344098,0.002179791,0.004632876,0.00033463328,0.00037450172,0.00017846221],"about_ca_topic_score_codex":0.0002477222,"about_ca_topic_score_gemma":0.00022999843,"teacher_disagreement_score":0.008927801,"about_ca_system_score_codex":0.000063045256,"about_ca_system_score_gemma":0.00004124817,"threshold_uncertainty_score":0.54566264},"labels":[],"label_agreement":null},{"id":"W2117952287","doi":"10.1128/ec.00446-07","title":"Key Function for the CCAAT-Binding Factor Php4 To Regulate Gene Expression in Response to Iron Deficiency in Fission Yeast","year":2008,"lang":"en","type":"article","venue":"Eukaryotic Cell","topic":"Fungal and yeast genetics research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":105,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Sherbrooke","funders":"Natural Sciences and Engineering Research Council of Canada; Cancer Research UK; Wellcome Trust","keywords":"Schizosaccharomyces pombe; Schizosaccharomyces; Biology; Transcription factor; Repressor; Gene; Transcriptional regulation; Gene expression; Regulation of gene expression; Microarray analysis techniques; Molecular biology; Biochemistry; Cell biology; Saccharomyces cerevisiae","score_opus":0.021404587978531602,"score_gpt":0.2613943953020841,"score_spread":0.2399898073235525,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2117952287","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99625385,0.00036879882,0.002038638,0.00029418146,0.00018000035,0.0006328153,0.000023630995,0.000006242368,0.00020184007],"genre_scores_gemma":[0.9939669,0.000054862056,0.0009746595,0.00009180343,0.00010078071,0.00006529819,0.000028079108,0.000023374345,0.004694289],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99869347,0.000108587745,0.00020989815,0.00040205443,0.00020963285,0.00037633395],"domain_scores_gemma":[0.9993961,0.00005599786,0.000031851578,0.00034079188,0.000044373744,0.00013092598],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000351198,0.00014114592,0.00011089184,0.00014439701,0.00013097719,0.000016525,0.00023101577,0.00011133254,0.000029337069],"category_scores_gemma":[0.00014417869,0.00010765056,0.00005480715,0.00027533912,0.000026670197,0.0000041520875,0.00018998874,0.00010743194,0.000051838062],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0020500722,0.00009682133,0.0065341843,0.00001833164,0.0000010850508,0.0000056534586,0.00031393988,0.0028955988,0.98611635,5.905629e-7,0.0010892261,0.0008781401],"study_design_scores_gemma":[0.00064013276,0.0005578248,0.19929476,0.000028001865,0.0000022972013,0.000004731715,0.00009285489,0.00020032613,0.7969935,0.0000060382245,0.0020354935,0.00014406668],"about_ca_topic_score_codex":0.000017321225,"about_ca_topic_score_gemma":0.000033395914,"teacher_disagreement_score":0.19276057,"about_ca_system_score_codex":0.000052044434,"about_ca_system_score_gemma":0.00008217172,"threshold_uncertainty_score":0.4389862},"labels":[],"label_agreement":null},{"id":"W2119102033","doi":"10.1128/ec.00275-13","title":"The 3′ Overhangs at Tetrahymena thermophila Telomeres Are Packaged by Four Proteins, Pot1a, Tpt1, Pat1, and Pat2","year":2013,"lang":"en","type":"article","venue":"Eukaryotic Cell","topic":"Protist diversity and phylogeny","field":"Biochemistry, Genetics and Molecular Biology","cited_by":12,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canada's Michael Smith Genome Sciences Centre; University of British Columbia","funders":"National Institute of Environmental Health Sciences; National Institute of General Medical Sciences; National Cancer Institute; National Institutes of Health","keywords":"Tetrahymena; Telomere; Telomerase; Biology; Telomere-binding protein; Cell biology; DNA; Molecular biology; DNA-binding protein; Genetics; Gene; Transcription factor","score_opus":0.004684065711293749,"score_gpt":0.16317849691269015,"score_spread":0.1584944312013964,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2119102033","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99165136,0.0034138472,0.000023555824,0.00061160483,0.00010214081,0.0006626785,0.00007285196,0.000016741635,0.003445242],"genre_scores_gemma":[0.9856877,0.0005868607,0.000073113864,0.00047926372,0.00013915655,0.000039270297,0.00006688874,0.000022383078,0.012905405],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99889624,0.00009609733,0.00014510438,0.0003556189,0.00015965203,0.00034727834],"domain_scores_gemma":[0.99927974,0.000036237932,0.000107024935,0.00039344534,0.00004982324,0.00013370188],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013516312,0.00020306226,0.00013660254,0.000015619773,0.00040804234,0.00007578053,0.00026905743,0.00014866277,0.00013697443],"category_scores_gemma":[0.000040018233,0.00015017959,0.00007466384,0.00005267418,0.00015728864,0.00000736494,0.00031324115,0.00012842,0.00013327738],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000093868206,0.00012715894,0.3160339,0.00007606508,0.00009151938,0.000017613173,0.00013263484,0.0000012801077,0.54454523,0.00001807248,0.13389236,0.0049702832],"study_design_scores_gemma":[0.0008818324,0.0003250067,0.665297,0.000018618313,0.000032884396,0.000020473917,0.00022258237,0.000016117456,0.3127993,0.00036006598,0.01960816,0.00041801433],"about_ca_topic_score_codex":0.00010438519,"about_ca_topic_score_gemma":0.000037628077,"teacher_disagreement_score":0.34926304,"about_ca_system_score_codex":0.00001980948,"about_ca_system_score_gemma":0.000022892933,"threshold_uncertainty_score":0.6124146},"labels":[],"label_agreement":null},{"id":"W2119484874","doi":"10.1128/ec.00263-10","title":"Orthologues of the Anaphase-Promoting Complex/Cyclosome Coactivators Cdc20p and Cdh1p Are Important for Mitotic Progression and Morphogenesis in Candida albicans","year":2011,"lang":"en","type":"article","venue":"Eukaryotic Cell","topic":"Glycosylation and Glycoproteins Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":21,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Concordia University","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Biology; Mitosis; Mitotic exit; Cell biology; Morphogenesis; Anaphase; Candida albicans; CDC20; Cyclin B; Anaphase-promoting complex; Polo-like kinase; Cyclin-dependent kinase 1; Cell cycle; Genetics; Cyclin; Cell; Gene","score_opus":0.027322162354595714,"score_gpt":0.26613648133847817,"score_spread":0.23881431898388245,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2119484874","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9983921,0.0005550912,0.000042765943,0.00008404218,0.000041088555,0.0006010638,0.000037174595,0.0000046754412,0.00024196973],"genre_scores_gemma":[0.9988699,0.00010906301,0.00074670673,0.000036983503,0.000023626748,0.00003464156,0.000030381036,0.000016171236,0.00013255818],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9990772,0.000071451446,0.00024129449,0.00027726075,0.00011613931,0.0002166298],"domain_scores_gemma":[0.9994792,0.000020699166,0.00014894741,0.00022233228,0.000052979347,0.00007584694],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002130217,0.00012331478,0.00016291442,0.000056324167,0.00008444014,0.000009762869,0.00011583082,0.00008829628,0.000021328135],"category_scores_gemma":[0.00008646609,0.00008953102,0.00004685785,0.000109365705,0.0001569419,0.0000045984807,0.00011757766,0.00006958956,2.990558e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000113539536,0.00012682998,0.77400166,0.00013568085,0.00001517497,0.0000066461816,0.00020226547,0.0000015157282,0.22425263,0.00001348515,0.00007399815,0.0010565481],"study_design_scores_gemma":[0.000847771,0.0003110888,0.68975246,0.00004919767,0.0000138720625,0.000013711313,0.00022145823,0.00029040722,0.30803975,0.000057724414,0.00028049783,0.00012205728],"about_ca_topic_score_codex":0.0001664484,"about_ca_topic_score_gemma":0.00037315144,"teacher_disagreement_score":0.08424921,"about_ca_system_score_codex":0.00000901276,"about_ca_system_score_gemma":0.000047817677,"threshold_uncertainty_score":0.3650969},"labels":[],"label_agreement":null},{"id":"W2119868952","doi":"10.1128/ec.00192-12","title":"Overexpression of a Novel Biotrophy-Specific Colletotrichum truncatum Effector, CtNUDIX, in Hemibiotrophic Fungal Phytopathogens Causes Incompatibility with Their Host Plants","year":2012,"lang":"en","type":"article","venue":"Eukaryotic Cell","topic":"Plant-Microbe Interactions and Immunity","field":"Agricultural and Biological Sciences","cited_by":82,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Plant Biotechnology Institute; University of Saskatchewan","funders":"Agence Nationale pour le Développement de la Recherche Universitaire; Natural Sciences and Engineering Research Council of Canada; Saskatchewan Pulse Growers","keywords":"Biology; Effector; Microbiology; Fungus; Hypha; Signal peptide; Magnaporthe grisea; Pathogen; Hypersensitive response; Colletotrichum; Cell biology; Gene; Botany; Plant disease resistance; Genetics; Peptide sequence; Oryza sativa","score_opus":0.020981703071616,"score_gpt":0.20723289357789298,"score_spread":0.18625119050627698,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2119868952","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99756736,0.0005678279,0.00000630807,0.000030055202,0.00024030375,0.00033663068,0.0006285197,0.00003071584,0.0005922718],"genre_scores_gemma":[0.99938816,0.000101679194,0.00012861981,0.000029782826,0.00014534844,0.000008924414,0.00011510327,0.00000292473,0.00007945224],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99858576,0.00014819465,0.00034564832,0.00029004313,0.00018808481,0.00044229664],"domain_scores_gemma":[0.99903077,0.0004165161,0.00020718027,0.00017045869,0.000052619896,0.00012247017],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00023417908,0.00025349436,0.00037276512,0.00004669936,0.00015193908,0.000028053952,0.00025614456,0.00011560285,0.00026348006],"category_scores_gemma":[0.000021242811,0.00009876252,0.00009604917,0.00042062157,0.000094655545,0.0001883788,0.000112507936,0.0002996456,0.000030703755],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00017362746,0.0012329939,0.247123,0.000024873068,0.000006844656,0.0000031583797,0.00012316216,0.00000766175,0.7507369,0.000002347242,0.00031087713,0.00025455476],"study_design_scores_gemma":[0.00048506405,0.00025439583,0.8021236,0.0001440521,0.0000064887613,0.000032858745,0.00022084525,0.000044127883,0.19594029,0.000001947551,0.00054986874,0.00019645803],"about_ca_topic_score_codex":0.0005761134,"about_ca_topic_score_gemma":0.00021552789,"teacher_disagreement_score":0.5550006,"about_ca_system_score_codex":0.000086713226,"about_ca_system_score_gemma":0.000017534841,"threshold_uncertainty_score":0.40274185},"labels":[],"label_agreement":null},{"id":"W2119904934","doi":"10.1128/ec.00048-06","title":"Antagonism between Two Mechanisms of Antifungal Drug Resistance","year":2006,"lang":"en","type":"article","venue":"Eukaryotic Cell","topic":"Fungal and yeast genetics research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":16,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research; Pfizer Canada; Pfizer","keywords":"Biology; Mutant; Gene; Genetics; Fluconazole; Saccharomyces cerevisiae; Mutation; Drug resistance; Population; Microbiology; Antifungal","score_opus":0.007117931085102551,"score_gpt":0.2388656688653212,"score_spread":0.23174773778021865,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2119904934","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9643289,0.0010179218,0.0041495124,0.000108240914,0.00015842685,0.00017097828,0.000077722645,0.0000126972045,0.029975614],"genre_scores_gemma":[0.97551787,0.00003951432,0.0019010706,0.00002813874,0.00032326262,0.000004691848,0.000189575,0.000026325399,0.021969577],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9987382,0.00006724242,0.0002621408,0.0003346386,0.00027305263,0.00032471935],"domain_scores_gemma":[0.9993443,0.000021157184,0.000081483384,0.0003834848,0.00009188082,0.00007770953],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00021705391,0.00015124916,0.00017897479,0.000050073908,0.0000671979,0.000017058343,0.0002839773,0.000078708494,0.00005833379],"category_scores_gemma":[0.000011703243,0.00014617662,0.00010127399,0.00012017284,0.00009401107,0.0000022852048,0.00014913717,0.00010602251,0.000046501387],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000042768243,0.00008853243,0.0101240985,0.000060944967,0.00001437438,0.0000069569537,0.00000743324,0.00005061658,0.98372257,0.0007739425,0.004993114,0.000114655595],"study_design_scores_gemma":[0.0005854987,0.00006394314,0.014358685,0.00001062688,0.000015572148,0.0000016694826,0.000013717655,0.000017518585,0.9804163,0.002647704,0.0017022436,0.00016653734],"about_ca_topic_score_codex":0.00006562079,"about_ca_topic_score_gemma":0.0000381521,"teacher_disagreement_score":0.011188959,"about_ca_system_score_codex":0.000009828629,"about_ca_system_score_gemma":0.00007786697,"threshold_uncertainty_score":0.596091},"labels":[],"label_agreement":null},{"id":"W2120584837","doi":"10.1128/ec.1.4.526-537.2002","title":"Isolation and Characterization of <i>YlBEM1</i> , a Gene Required for Cell Polarization and Differentiation in the Dimorphic Yeast <i>Yarrowia lipolytica</i>","year":2002,"lang":"en","type":"article","venue":"Eukaryotic Cell","topic":"Fungal and yeast genetics research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":22,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"Biology; Yarrowia; Yeast; Cell biology; Morphogenesis; Saccharomyces cerevisiae; Cytokinesis; Hypha; Cell division; Actin; Cell polarity; Gene; Genetics; Cell; Microbiology","score_opus":0.012878119448139195,"score_gpt":0.21336555316321237,"score_spread":0.2004874337150732,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2120584837","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99469596,0.0005244968,0.003912105,0.00018270574,0.000045916437,0.0003822224,0.000038916358,0.0000030625226,0.00021458787],"genre_scores_gemma":[0.99834526,0.00038408177,0.00027634017,0.00008553424,0.00008712991,0.000019422818,0.00032019272,0.000013903022,0.00046811116],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99926364,0.00006930569,0.00018805376,0.00021371989,0.00011877138,0.00014649733],"domain_scores_gemma":[0.999656,0.000019902864,0.00007983363,0.00015601792,0.000051945874,0.00003630048],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015064016,0.0000976174,0.000095332405,0.000051021845,0.000056132827,0.000028139486,0.00008055707,0.00008878619,0.000008172792],"category_scores_gemma":[0.000021749169,0.00008211979,0.00002629483,0.00010377336,0.000047252335,0.00000894036,0.00004431337,0.00005133202,0.0000015998362],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000043957014,0.00010884229,0.029101647,0.000080516205,0.00000382721,2.3462138e-7,0.00017062073,0.0000056761223,0.9698329,0.000020884727,0.000029791758,0.000601103],"study_design_scores_gemma":[0.0011832439,0.00039314173,0.28112984,0.000015141706,0.000027753764,0.0000049761306,0.000044152315,0.013510685,0.7033268,0.0000627524,0.000154784,0.00014673866],"about_ca_topic_score_codex":0.0000063995467,"about_ca_topic_score_gemma":0.0000058291434,"teacher_disagreement_score":0.2665061,"about_ca_system_score_codex":0.000005072408,"about_ca_system_score_gemma":0.000010451281,"threshold_uncertainty_score":0.33487478},"labels":[],"label_agreement":null},{"id":"W2121570677","doi":"10.1128/ec.00199-06","title":"A Transcription Factor Cascade Involving Fep1 and the CCAAT-Binding Factor Php4 Regulates Gene Expression in Response to Iron Deficiency in the Fission Yeast <i>Schizosaccharomyces pombe</i>","year":2006,"lang":"en","type":"article","venue":"Eukaryotic Cell","topic":"Fungal and yeast genetics research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":112,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Sherbrooke","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Schizosaccharomyces pombe; Biology; Schizosaccharomyces; Transcription factor; Molecular biology; Gene expression; Promoter; Gene; CAAT box; Regulation of gene expression; Genetics; Mutant","score_opus":0.010892247318077357,"score_gpt":0.23368290910686662,"score_spread":0.22279066178878926,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2121570677","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9958214,0.0028532892,0.00006027494,0.00046102982,0.000072268886,0.00049969216,0.000032208114,0.0000068750032,0.00019296228],"genre_scores_gemma":[0.99877435,0.00022172178,0.00022445126,0.0000764168,0.00009145951,0.00003211459,0.000034091205,0.000020141677,0.0005252586],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99818605,0.0004639517,0.00027522218,0.00040692626,0.0002920476,0.00037580106],"domain_scores_gemma":[0.9994515,0.00010027608,0.00005418849,0.00030147925,0.000024775156,0.00006774138],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005749198,0.00019264995,0.00015463121,0.00011514688,0.00014872797,0.00008187719,0.00030701395,0.00013547254,0.000018247489],"category_scores_gemma":[0.00007439073,0.000117993,0.00006171122,0.00025080313,0.000090678295,0.000010890195,0.00012537316,0.00021302742,0.000008514337],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0009635254,0.00009802428,0.0119659705,0.000034812652,0.0000010950231,0.0000081940125,0.00095711206,0.00021331564,0.98540694,0.000006200999,0.00011983334,0.00022497379],"study_design_scores_gemma":[0.0012738532,0.00015078219,0.21595572,0.000053647494,0.0000042650763,0.000011427882,0.0004333407,0.00016611915,0.7815657,0.00004724325,0.00017772146,0.0001601429],"about_ca_topic_score_codex":0.00015333953,"about_ca_topic_score_gemma":0.00019029275,"teacher_disagreement_score":0.20398976,"about_ca_system_score_codex":0.00003204853,"about_ca_system_score_gemma":0.000048242116,"threshold_uncertainty_score":0.48116148},"labels":[],"label_agreement":null},{"id":"W2121849617","doi":"10.1128/ec.1.2.213-228.2002","title":"Myosin I Is Required for Hypha Formation in <i>Candida</i> <i>albicans</i>","year":2002,"lang":"en","type":"article","venue":"Eukaryotic Cell","topic":"Fungal and yeast genetics research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":70,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Biotechnology Research Institute","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Biology; Hypha; Candida albicans; Mutant; Budding; Cell biology; Actin; Myosin; Genetics; Gene; Microbiology","score_opus":0.020736940842537493,"score_gpt":0.24612902574199338,"score_spread":0.2253920848994559,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2121849617","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9570518,0.0032828276,0.0025653688,0.000999789,0.00024526296,0.00081153825,0.000097290635,0.00001939948,0.03492669],"genre_scores_gemma":[0.9879374,0.00046076247,0.00073852733,0.0007853794,0.00017789539,0.000057645688,0.000097379685,0.00002456463,0.009720471],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9989253,0.000035450954,0.00022590128,0.00028923375,0.00016054367,0.0003635534],"domain_scores_gemma":[0.9994997,0.000019111363,0.00004594252,0.00028223198,0.000058755864,0.0000942649],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013202133,0.00013383814,0.00012324066,0.000061000042,0.000060913964,0.000027729806,0.00019345705,0.0001162642,0.00017984492],"category_scores_gemma":[0.000028475646,0.00013209987,0.00008483772,0.00013403247,0.000043468004,0.0000065294093,0.00007059383,0.000078577694,0.00009204815],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00016110287,0.00034869037,0.002997358,0.0001656795,0.00001535749,0.000008610958,0.00029868947,0.0001277275,0.90044814,0.00003900835,0.08746769,0.0079219155],"study_design_scores_gemma":[0.001952717,0.0005018323,0.0012422918,0.000020077941,0.000010762685,0.000014186552,0.00006535771,0.0047623203,0.93124485,0.00018230635,0.05972045,0.00028285442],"about_ca_topic_score_codex":0.000014610272,"about_ca_topic_score_gemma":0.000026588465,"teacher_disagreement_score":0.03088554,"about_ca_system_score_codex":0.000023015946,"about_ca_system_score_gemma":0.000019562527,"threshold_uncertainty_score":0.53868765},"labels":[],"label_agreement":null},{"id":"W2122817117","doi":"10.1128/ec.00385-05","title":"Transcript Profiles of <i>Candida albicans</i> Cortical Actin Patch Mutants Reflect Their Cellular Defects: Contribution of the Hog1p and Mkc1p Signaling Pathways","year":2006,"lang":"en","type":"article","venue":"Eukaryotic Cell","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":25,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Biotechnology Research Institute","funders":"National Institute of Dental and Craniofacial Research; Canadian Institutes of Health Research","keywords":"Biology; Cell biology; Endocytosis; Mutant; Actin; Cytochalasin D; Green fluorescent protein; Osmotic shock; Candida albicans; Signal transduction; Cytoskeleton; Gene; Cell; Biochemistry; Genetics","score_opus":0.010754909991477653,"score_gpt":0.2159272975852814,"score_spread":0.20517238759380374,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2122817117","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99558914,0.0013833436,0.000759333,0.00009829486,0.00009393032,0.00062350725,0.00007416538,0.000024466188,0.0013538015],"genre_scores_gemma":[0.999488,0.000052574997,0.00009641189,0.00007079944,0.00006392391,0.0000069256635,0.0000293215,0.00001922366,0.0001728246],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99836695,0.00013705295,0.0005283295,0.0003044704,0.00035123006,0.00031197089],"domain_scores_gemma":[0.99893767,0.00026298309,0.00019386446,0.00036175695,0.00015823978,0.000085489526],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004487682,0.00019548474,0.0004984325,0.00003735964,0.00010321807,0.000008848068,0.00010751126,0.00012969725,0.000084440406],"category_scores_gemma":[0.00012952197,0.00012715721,0.00020013626,0.00023282315,0.00030616493,0.000048248578,0.000026650046,0.00027972736,0.000001940549],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003429355,0.00025160526,0.3316254,0.00024179148,0.00001839269,0.000011088348,0.0001770549,0.0000031138059,0.66688657,0.00016964984,0.000056934103,0.00021547843],"study_design_scores_gemma":[0.0010750376,0.0002475716,0.29785696,0.00017854865,0.0001450337,0.000005177337,0.00030778404,0.000101612655,0.69966465,0.00028553567,0.000039941904,0.000092148926],"about_ca_topic_score_codex":0.00025216502,"about_ca_topic_score_gemma":0.00012035399,"teacher_disagreement_score":0.033768456,"about_ca_system_score_codex":0.000053833333,"about_ca_system_score_gemma":0.00016108436,"threshold_uncertainty_score":0.5185321},"labels":[],"label_agreement":null},{"id":"W2123672359","doi":"10.1128/ec.00106-06","title":"Evolutionary Origins of the Eukaryotic Shikimate Pathway: Gene Fusions, Horizontal Gene Transfer, and Endosymbiotic Replacements","year":2006,"lang":"en","type":"article","venue":"Eukaryotic Cell","topic":"Protist diversity and phylogeny","field":"Biochemistry, Genetics and Molecular Biology","cited_by":205,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"National Institute of Allergy and Infectious Diseases; Biotechnology and Biological Sciences Research Council; Canadian Institutes of Health Research; National Institutes of Health; Wellcome Trust; Joint Genome Institute; Research to Prevent Blindness; University of Oxford; U.S. Department of Energy","keywords":"Biology; Eukaryote; Horizontal gene transfer; Plastid; Genome; Genetics; Gene; Shikimate pathway; Endosymbiosis; Lineage (genetic); Chloroplast","score_opus":0.005263579022838457,"score_gpt":0.18000260391738634,"score_spread":0.1747390248945479,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2123672359","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9947512,0.0024655773,0.0005099494,0.0000710721,0.00031922062,0.00039308437,0.0002654564,0.0000137049165,0.0012107347],"genre_scores_gemma":[0.9978376,0.00024948272,0.00065452466,0.00009234856,0.00015853155,0.0000065270415,0.0002316802,0.000019991026,0.00074933306],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99869543,0.000100871854,0.00027400543,0.00040627096,0.00021981045,0.00030359696],"domain_scores_gemma":[0.99932665,0.000017144903,0.0000720903,0.00045464686,0.00004988004,0.00007956941],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014119367,0.00021032432,0.00018623713,0.000040232655,0.0002237474,0.000014365376,0.00028627412,0.00014352617,0.000053290783],"category_scores_gemma":[0.000012514032,0.00018118674,0.0001405581,0.00012299437,0.0001758162,0.000007115688,0.00022414853,0.00011758186,0.000012803048],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012857786,0.00030330708,0.31304413,0.00007101578,0.000048049722,0.00001728045,0.00004031324,0.00007593164,0.6847079,0.0005601297,0.0008428887,0.00016051038],"study_design_scores_gemma":[0.0010811179,0.00026536133,0.39298406,0.0000159945,0.00006856533,0.000052110594,0.000030712607,0.000079870784,0.6043597,0.00019707489,0.00065118907,0.00021424628],"about_ca_topic_score_codex":0.00028237625,"about_ca_topic_score_gemma":0.00004603634,"teacher_disagreement_score":0.08034819,"about_ca_system_score_codex":0.00005390201,"about_ca_system_score_gemma":0.000121635545,"threshold_uncertainty_score":0.7388581},"labels":[],"label_agreement":null},{"id":"W2123687337","doi":"10.1128/ec.00159-12","title":"Structural Requirements for the Activity of the MirB Ferrisiderophore Transporter of Aspergillus fumigatus","year":2012,"lang":"en","type":"article","venue":"Eukaryotic Cell","topic":"Fungal and yeast genetics research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":63,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Simon Fraser University","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Mutant; Aspergillus fumigatus; Siderophore; Biochemistry; Biology; Wild type; Virulence; Saccharomyces cerevisiae; Chemistry; Yeast; Microbiology; Gene","score_opus":0.030472342828343914,"score_gpt":0.2791801647168005,"score_spread":0.2487078218884566,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2123687337","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99685144,0.0014017451,0.00018937411,0.00010275962,0.00028418555,0.00033933422,0.000056067875,0.0000015214814,0.00077356445],"genre_scores_gemma":[0.99862635,0.00006322209,0.00012337293,0.000036209778,0.00014574552,0.000011776641,0.000012286282,0.000014217981,0.0009668352],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9991842,0.00004520929,0.0001601271,0.00013825414,0.00020717345,0.00026504477],"domain_scores_gemma":[0.999352,0.00002974545,0.00008342361,0.00040517008,0.00007473306,0.0000549301],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00016739417,0.00010615914,0.00011646335,0.000012359289,0.000075665994,0.000004315588,0.00030076428,0.00007696492,0.000050951377],"category_scores_gemma":[0.000022177723,0.000058660306,0.000165791,0.00006516637,0.00014607991,0.0000031196762,0.00008980197,0.000079984566,0.0000014307528],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001783292,0.000078816876,0.0548058,0.000096280586,0.00005960986,1.2929902e-7,0.00012769665,0.00006717166,0.9423275,0.000025338139,0.00044010358,0.0017932185],"study_design_scores_gemma":[0.00032054418,0.00010815961,0.28555557,0.0000057522434,0.000029041306,0.0000015200384,0.00003695443,0.000093986186,0.7132637,0.000024562034,0.00050303765,0.000057192174],"about_ca_topic_score_codex":0.000040454644,"about_ca_topic_score_gemma":0.000018329825,"teacher_disagreement_score":0.23074979,"about_ca_system_score_codex":0.000007738627,"about_ca_system_score_gemma":0.00005054752,"threshold_uncertainty_score":0.23920979},"labels":[],"label_agreement":null},{"id":"W2123822339","doi":"10.1128/ec.00396-07","title":"Evolutionary Dynamics of Light-Independent Protochlorophyllide Oxidoreductase Genes in the Secondary Plastids of Cryptophyte Algae","year":2008,"lang":"en","type":"article","venue":"Eukaryotic Cell","topic":"Algal biology and biofuel production","field":"Energy","cited_by":26,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University; Canadian Institute for Advanced Research","funders":"","keywords":"Plastid; Protochlorophyllide; Biology; Algae; Gene; Oxidoreductase; Botany; Green algae; Genetics; Evolutionary biology; Biosynthesis; Biochemistry; Chloroplast; Enzyme","score_opus":0.009815886513877804,"score_gpt":0.20427436534308505,"score_spread":0.19445847882920725,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2123822339","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99019843,0.0010068304,0.00006544681,0.00028725248,0.0003690709,0.00062236615,0.000024523617,0.000021816753,0.007404276],"genre_scores_gemma":[0.99836886,0.000110924695,0.00065961876,0.00004511311,0.00019326553,0.00006124543,0.000093647606,0.000013908361,0.0004534076],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9985911,0.00016689679,0.00047068883,0.0002959457,0.0002412118,0.00023413607],"domain_scores_gemma":[0.9992388,0.00007607623,0.00020498311,0.0003813757,0.000063859705,0.00003490973],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00021924415,0.00017709637,0.00025627157,0.00011759788,0.00009503253,0.0000026736498,0.00030421035,0.00016542623,0.00024360316],"category_scores_gemma":[0.000030906587,0.00012773421,0.00010463121,0.00027370887,0.00026916404,0.00009309405,0.000065195636,0.00027882433,0.00003875483],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0043601883,0.007539557,0.520836,0.0020342006,0.0004118835,0.0007691917,0.0075524314,0.008411666,0.39185306,0.025899455,0.007098909,0.02323345],"study_design_scores_gemma":[0.0016641174,0.0009026314,0.73359835,0.00005750692,0.000055931374,0.00033303906,0.0007537101,0.0009534176,0.25282428,0.006500845,0.0019106845,0.00044551073],"about_ca_topic_score_codex":0.0004344206,"about_ca_topic_score_gemma":0.00013615961,"teacher_disagreement_score":0.21276231,"about_ca_system_score_codex":0.000063660416,"about_ca_system_score_gemma":0.00013595901,"threshold_uncertainty_score":0.520885},"labels":[],"label_agreement":null},{"id":"W2124198277","doi":"10.1128/ec.00103-10","title":"Heterologous Expression of Candida albicans Cell Wall-Associated Adhesins in Saccharomyces cerevisiae Reveals Differential Specificities in Adherence and Biofilm Formation and in Binding Oral Streptococcus gordonii","year":2010,"lang":"en","type":"article","venue":"Eukaryotic Cell","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":111,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"National Institute of Dental and Craniofacial Research; National Institutes of Health; Johns Hopkins University","keywords":"Streptococcus gordonii; Candida albicans; Bacterial adhesin; Microbiology; Biology; Biofilm; Corpus albicans; Saccharomyces cerevisiae; Virulence; Fungal protein; Yeast; Bacteria; Biochemistry; Gene; Genetics","score_opus":0.015190397118006778,"score_gpt":0.25116730524471165,"score_spread":0.23597690812670488,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2124198277","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9987316,0.00022783951,0.000005082949,0.00004514446,0.00007150074,0.0005796983,0.00003929035,0.00001401627,0.00028583079],"genre_scores_gemma":[0.9992908,0.00026405352,0.000119787626,0.000020519781,0.000016938044,0.000011952098,0.000056124132,0.000013197594,0.0002066244],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99844354,0.00009772554,0.0005939662,0.0003354573,0.00019833902,0.0003309957],"domain_scores_gemma":[0.9993079,0.00015627338,0.00020262538,0.00020499525,0.000034425088,0.000093820934],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002973917,0.00019810235,0.0005328661,0.0002574498,0.00003772776,0.000023075485,0.000085061314,0.0001902052,0.00016537761],"category_scores_gemma":[0.000086200984,0.00017107683,0.00004358177,0.00021560169,0.00013531983,0.00017954265,0.000060941373,0.0004268593,0.0000021287667],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00019355683,0.00025944176,0.7122238,0.0002914914,0.0000018998666,0.00002017813,0.0008966675,0.0000011053211,0.28572717,0.0000023600892,0.000020170308,0.0003621606],"study_design_scores_gemma":[0.0021793852,0.0002748622,0.9542941,0.00045886135,0.000016716816,0.000002106455,0.0012479614,0.00032083565,0.04101505,0.000043437172,0.000003416949,0.00014327644],"about_ca_topic_score_codex":0.00096818834,"about_ca_topic_score_gemma":0.015587868,"teacher_disagreement_score":0.24471211,"about_ca_system_score_codex":0.00007459098,"about_ca_system_score_gemma":0.000052788488,"threshold_uncertainty_score":0.8698396},"labels":[],"label_agreement":null},{"id":"W2124513795","doi":"10.1128/ec.05163-11","title":"Curcumin Inhibits Growth of Saccharomyces cerevisiae through Iron Chelation","year":2011,"lang":"en","type":"article","venue":"Eukaryotic Cell","topic":"Curcumin's Biomedical Applications","field":"Biochemistry, Genetics and Molecular Biology","cited_by":54,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institute of General Medical Sciences; National Human Genome Research Institute; Canadian Institutes of Health Research; National Institutes of Health; National Institute for Health and Care Research","keywords":"Curcumin; Yeast; Saccharomyces cerevisiae; Biology; Biochemistry; Intracellular; Cell biology; Mutant; Cell cycle; Cell; Endoplasmic reticulum; Pharmacology; Gene","score_opus":0.017180519338728596,"score_gpt":0.227815682759202,"score_spread":0.2106351634204734,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2124513795","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9647021,0.000843456,0.0073772385,0.000171364,0.00011184039,0.00031776214,0.000029666306,0.000024352234,0.0264222],"genre_scores_gemma":[0.9944952,0.00011180908,0.004222357,0.00011328429,0.0001475306,0.000020468744,0.00016901453,0.000021900383,0.00069844024],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9989812,0.000033154687,0.00030570672,0.00032777624,0.00015500678,0.00019717375],"domain_scores_gemma":[0.99930084,0.000014558014,0.00015725255,0.0003700241,0.00007871116,0.00007863123],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000111749774,0.00014849714,0.00015265544,0.00003285389,0.000042865377,0.0000056366107,0.00022771193,0.00015367703,0.00032099776],"category_scores_gemma":[0.00004106728,0.0001409255,0.000086697764,0.00017389972,0.0001492459,0.000007650595,0.00011715466,0.0000809717,0.00009832757],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00005691277,0.000635605,0.049464546,0.0002370193,0.000036618476,0.000002159196,0.00073295727,0.0000014552794,0.9386138,0.0021651906,0.0065098614,0.0015439214],"study_design_scores_gemma":[0.00043357504,0.0001841664,0.053214908,0.00001866963,0.0000372605,0.0000056761846,0.000055004366,0.000011755317,0.9421345,0.0010695686,0.002644755,0.00019018241],"about_ca_topic_score_codex":0.00008638885,"about_ca_topic_score_gemma":0.0000058023547,"teacher_disagreement_score":0.029793074,"about_ca_system_score_codex":0.000011313187,"about_ca_system_score_gemma":0.000046807116,"threshold_uncertainty_score":0.5746775},"labels":[],"label_agreement":null},{"id":"W2125176616","doi":"10.1128/ec.00074-09","title":"Role of Ndt80p in Sterol Metabolism Regulation and Azole Resistance in <i>Candida albicans</i>","year":2009,"lang":"en","type":"article","venue":"Eukaryotic Cell","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":93,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Université de Montréal; Biotechnology Research Institute","funders":"Canadian Institutes of Health Research","keywords":"Biology; Chromatin immunoprecipitation; Candida albicans; Promoter; Transcription factor; Gene expression; Gene; Regulation of gene expression; Regulon; Antifungal drug; Transcriptional regulation; Gene expression profiling; Genetics; Cell biology","score_opus":0.005370868258480833,"score_gpt":0.22493871060953766,"score_spread":0.21956784235105684,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2125176616","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9761611,0.0038367999,0.000027742675,0.00036850854,0.000022287986,0.00027970524,0.0000038311246,0.000011479099,0.019288545],"genre_scores_gemma":[0.9971253,0.00014780268,0.0005428158,0.0002322901,0.000028469158,0.0000028525199,0.000007903453,0.000007701409,0.0019048273],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99891925,0.000050324343,0.00036350836,0.000257617,0.00020475437,0.00020455457],"domain_scores_gemma":[0.9994972,0.000048298272,0.000077365905,0.0002713738,0.000035674937,0.000070128524],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00027487514,0.00011391426,0.0003522403,0.00011533192,0.000016808404,0.0000062218915,0.000054313674,0.00007354484,0.0000690152],"category_scores_gemma":[0.000041799452,0.00010609336,0.00004117948,0.00026318888,0.000058875972,0.00009003844,0.000012802138,0.00014936674,0.000004013249],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0009869572,0.00041659738,0.93614197,0.00017265734,0.0000056045196,0.000023721232,0.0011870903,0.000015766496,0.05647337,0.0006862563,0.00022990532,0.0036601236],"study_design_scores_gemma":[0.0015532373,0.0000699574,0.9879949,0.00012704718,0.000020601283,0.0000011395209,0.00020597062,0.00012801618,0.0074237315,0.002028717,0.00036179123,0.0000848902],"about_ca_topic_score_codex":0.00010627711,"about_ca_topic_score_gemma":0.0012871447,"teacher_disagreement_score":0.05185295,"about_ca_system_score_codex":0.000048152877,"about_ca_system_score_gemma":0.000057501216,"threshold_uncertainty_score":0.43263617},"labels":[],"label_agreement":null},{"id":"W2125244981","doi":"10.1128/ec.00305-10","title":"Conjugated Linoleic Acid Inhibits Hyphal Growth in Candida albicans by Modulating Ras1p Cellular Levels and Downregulating TEC1 Expression","year":2011,"lang":"en","type":"article","venue":"Eukaryotic Cell","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":43,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Biotechnology Research Institute; Université de Montréal","funders":"Natural Sciences and Engineering Research Council of Canada; University of California, Irvine; Fonds Québécois de la Recherche sur la Nature et les Technologies; Carnegie Mellon University","keywords":"Candida albicans; Hypha; Biology; Conjugated linoleic acid; Cell biology; Downregulation and upregulation; Yeast; Corpus albicans; Growth inhibition; Gene expression; Microbiology; Cell growth; Linoleic acid; Biochemistry; Gene; Fatty acid","score_opus":0.022862491408554637,"score_gpt":0.2265947442337551,"score_spread":0.20373225282520047,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2125244981","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99113864,0.0011170135,0.0006235452,0.000050430885,0.0000727658,0.00046293464,0.000017273644,0.00007246509,0.0064449417],"genre_scores_gemma":[0.99689174,0.00002074052,0.0018575802,0.00010844145,0.00006130196,0.000009955426,0.00004065445,0.000038841292,0.0009707303],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9979438,0.000103621445,0.00055024924,0.0005824402,0.00032265836,0.0004972188],"domain_scores_gemma":[0.9991049,0.0000875091,0.00014917924,0.0003200195,0.00009015531,0.00024822186],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00038942043,0.0002876859,0.00047984463,0.00011116555,0.00012839303,0.000020733974,0.00009921101,0.00019349549,0.00039012852],"category_scores_gemma":[0.0001593031,0.00025157802,0.000074212105,0.0002569647,0.00015799327,0.00016092372,0.00009671294,0.00038723837,0.00002020096],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014183906,0.00017218255,0.48831773,0.00018696113,0.000008312507,0.00008081892,0.0011974382,0.0000017892718,0.50920755,0.0000123685795,0.00010274191,0.0005702793],"study_design_scores_gemma":[0.0016994984,0.00015881326,0.42486694,0.00032722284,0.00003458569,0.000010341461,0.00045635915,0.00083235174,0.5712686,0.000116226525,0.0000061150145,0.00022289621],"about_ca_topic_score_codex":0.00059776497,"about_ca_topic_score_gemma":0.000077677294,"teacher_disagreement_score":0.063450776,"about_ca_system_score_codex":0.00009816869,"about_ca_system_score_gemma":0.00009647501,"threshold_uncertainty_score":0.9999936},"labels":[],"label_agreement":null},{"id":"W2126210046","doi":"10.1128/ec.00129-12","title":"Defects in Mitochondrial and Peroxisomal β-Oxidation Influence Virulence in the Maize Pathogen Ustilago maydis","year":2012,"lang":"en","type":"article","venue":"Eukaryotic Cell","topic":"Fungal and yeast genetics research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":44,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canada's Michael Smith Genome Sciences Centre; University of British Columbia","funders":"Natural Sciences and Engineering Research Council of Canada; Burroughs Wellcome Fund","keywords":"Ustilago; Biology; Virulence; Peroxisome; Mutant; Gene; Pathogen; Microbiology; Mitochondrion; Biochemistry; Genetics","score_opus":0.008643889707112492,"score_gpt":0.24099948678927818,"score_spread":0.2323555970821657,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2126210046","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9972622,0.0013202457,0.000039527407,0.000051906052,0.000097265656,0.00024487296,0.0000068779987,0.000002755885,0.0009743428],"genre_scores_gemma":[0.998897,0.00024248229,0.0003142861,0.00014637837,0.00019575603,0.000028106002,0.000028618975,0.000010376513,0.0001369723],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9989382,0.00015044922,0.00015145143,0.00023218335,0.00017640911,0.00035130492],"domain_scores_gemma":[0.99960077,0.000039007708,0.000029712306,0.00023326956,0.000022946895,0.000074296135],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00028677768,0.00011569424,0.00008574814,0.000051245494,0.000041569332,0.000028169601,0.00019866104,0.00010397278,0.000018268667],"category_scores_gemma":[0.00009232206,0.000091140595,0.000028562572,0.00013957548,0.00007025104,0.000009870171,0.00012655219,0.00014337232,0.000028775314],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000050305967,0.00008812077,0.31052685,0.000017723694,0.0000014273031,0.0000051850284,0.00020444607,0.000072321054,0.6886197,0.000026174346,0.0000687839,0.00031896896],"study_design_scores_gemma":[0.0005802064,0.00013834752,0.83580756,0.000014388597,0.000004396533,0.000015341771,0.00015102018,0.00009877261,0.16242738,0.000043350232,0.000574201,0.00014503457],"about_ca_topic_score_codex":0.00005245626,"about_ca_topic_score_gemma":0.00007692665,"teacher_disagreement_score":0.5261923,"about_ca_system_score_codex":0.000012678471,"about_ca_system_score_gemma":0.000039094222,"threshold_uncertainty_score":0.37166056},"labels":[],"label_agreement":null},{"id":"W2126632528","doi":"10.1128/ec.1.4.558-567.2002","title":"<i>Schizosaccharomyces pombe</i> Git7p, a Member of the <i>Saccharomyces cerevisiae</i> Sgt1p Family, Is Required for Glucose and Cyclic AMP Signaling, Cell Wall Integrity, and Septation","year":2002,"lang":"en","type":"article","venue":"Eukaryotic Cell","topic":"Fungal and yeast genetics research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":36,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"National Institute of General Medical Sciences; National Institutes of Health","keywords":"Biology; Schizosaccharomyces pombe; Saccharomyces cerevisiae; Cyclin-dependent kinase 7; Schizosaccharomyces; Gene family; Cell biology; Gene; Heterotrimeric G protein; Protein family; Transcription factor; Signal transduction; Genetics; G protein; Cell cycle; Cyclin-dependent kinase 2; Gene expression","score_opus":0.03130976623529687,"score_gpt":0.2594361364451629,"score_spread":0.22812637020986604,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2126632528","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9847957,0.011349039,0.00013961486,0.0004481463,0.00010744008,0.00057542307,0.00007740345,0.000010350902,0.0024968924],"genre_scores_gemma":[0.99133533,0.0028945992,0.0013112938,0.00051972625,0.00012434002,0.000035014764,0.00004029183,0.000038457536,0.0037009711],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99837667,0.000104320534,0.00035566243,0.0005306448,0.0002732041,0.00035952992],"domain_scores_gemma":[0.99904394,0.00007872363,0.00017010867,0.00041876204,0.00014661386,0.00014183407],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00025554636,0.0002631391,0.00026542295,0.000050215855,0.00015101419,0.00006911673,0.00031248128,0.00019309559,0.000083902785],"category_scores_gemma":[0.000047871792,0.00020174733,0.00015531623,0.00014305716,0.0002037568,0.000012652272,0.00029489616,0.00020219252,0.0000136267645],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000094399686,0.0001669698,0.008091075,0.00037808117,0.000038351107,8.4898596e-7,0.00032023393,0.000013778978,0.9835848,0.000017911809,0.006060099,0.001233444],"study_design_scores_gemma":[0.0013328508,0.0003700168,0.0032184285,0.000059988706,0.00007569054,0.000011979181,0.0001527163,0.00077910133,0.9831082,0.00032951246,0.010254015,0.0003074642],"about_ca_topic_score_codex":0.000052703428,"about_ca_topic_score_gemma":0.000022221468,"teacher_disagreement_score":0.00845444,"about_ca_system_score_codex":0.000010209245,"about_ca_system_score_gemma":0.000043124488,"threshold_uncertainty_score":0.82270175},"labels":[],"label_agreement":null},{"id":"W2127378602","doi":"10.1128/ec.3.1.61-71.2004","title":"The Ca <sup>2+</sup> /Calcineurin-Regulated <i>cup</i> Gene Family in <i>Dictyostelium discoideum</i> and Its Possible Involvement in Development","year":2004,"lang":"en","type":"article","venue":"Eukaryotic Cell","topic":"Signaling Pathways in Disease","field":"Biochemistry, Genetics and Molecular Biology","cited_by":11,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"York University","funders":"China University of Petroleum, Beijing","keywords":"Dictyostelium discoideum; Biology; Calcineurin; Cell biology; Dictyostelium; Gene; Gene family; Genetics; Gene expression","score_opus":0.010339847144894046,"score_gpt":0.21501238784556728,"score_spread":0.20467254070067323,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2127378602","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9915697,0.007008808,0.0000512687,0.0002636428,0.00011473385,0.00047041802,0.000018919056,0.000016505219,0.00048600044],"genre_scores_gemma":[0.9978259,0.00037759574,0.0003226944,0.00071586657,0.00007491457,0.000061501865,0.00013244829,0.000038862992,0.00045020375],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9981326,0.00008593026,0.0004789036,0.0005452179,0.00024433612,0.0005130528],"domain_scores_gemma":[0.9992998,0.00003080788,0.00007841974,0.00037896333,0.000046853263,0.00016510829],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00037525906,0.00028382256,0.00019870965,0.00006532877,0.00012777344,0.00005045605,0.00031949053,0.00013158683,0.0000058041796],"category_scores_gemma":[0.000048194142,0.00023545121,0.000054338296,0.00022957448,0.00008012404,0.000007812098,0.00030157136,0.00017012584,0.000026051888],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00046984322,0.001169271,0.065213494,0.00022559919,0.000082797764,0.00031058994,0.0022509499,0.08762863,0.84016687,0.000066974055,0.0013545618,0.0010604336],"study_design_scores_gemma":[0.003397624,0.00018346842,0.047287278,0.000101930775,0.000019189214,0.000012067776,0.00039343594,0.0005921402,0.9460588,0.00012683315,0.0013687039,0.00045849135],"about_ca_topic_score_codex":0.00009978642,"about_ca_topic_score_gemma":0.0001598685,"teacher_disagreement_score":0.10589198,"about_ca_system_score_codex":0.00010174747,"about_ca_system_score_gemma":0.00034906398,"threshold_uncertainty_score":0.96014214},"labels":[],"label_agreement":null},{"id":"W2127849742","doi":"10.1128/ec.00015-15","title":"Candida albicans Kinesin Kar3 Depends on a Cik1-Like Regulatory Partner Protein for Its Roles in Mating, Cell Morphogenesis, and Bipolar Spindle Formation","year":2015,"lang":"en","type":"article","venue":"Eukaryotic Cell","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":9,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Queen's University","funders":"Canadian Institutes of Health Research","keywords":"Kinesin; Biology; Cell biology; Microtubule; Mitosis; Spindle apparatus; Spindle pole body; Motor protein; Fungal protein; Regulator; Candida albicans; Morphogenesis; Antifungal drug; Kinetochore; Saccharomyces cerevisiae; Genetics; Yeast; Cell division; Cell; Gene","score_opus":0.028183328451768415,"score_gpt":0.2646299986986419,"score_spread":0.2364466702468735,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2127849742","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9935,0.002296528,0.0003789313,0.00024564788,0.00007835737,0.0013818697,0.000026227437,0.000044158223,0.0020482682],"genre_scores_gemma":[0.992296,0.0000356862,0.0009649345,0.0002232683,0.00009971109,0.000099340126,0.000068310124,0.000037253936,0.0061755343],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9983163,0.00007763188,0.00043532034,0.00039834747,0.00037483737,0.00039754607],"domain_scores_gemma":[0.9990333,0.000055674678,0.0001496936,0.00037191683,0.00012825061,0.00026118112],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00061939255,0.00024162988,0.00038006308,0.00015431199,0.00007933966,0.000027930362,0.00009195403,0.00015158464,0.000059145656],"category_scores_gemma":[0.000114249924,0.0002094041,0.000081951264,0.0001861431,0.000055620127,0.00016292524,0.000036744215,0.00016900331,0.000039482373],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.004410528,0.002377028,0.7067134,0.0049618515,0.000057058805,0.00020262272,0.003938912,0.0002811416,0.25464678,0.00039890772,0.012465561,0.0095462315],"study_design_scores_gemma":[0.0094127385,0.0018360666,0.6411223,0.0006771083,0.00017379562,0.000032039567,0.0015133908,0.006036857,0.33097836,0.00023897996,0.007241385,0.00073703437],"about_ca_topic_score_codex":0.00013413448,"about_ca_topic_score_gemma":0.00079178927,"teacher_disagreement_score":0.07633158,"about_ca_system_score_codex":0.00019174874,"about_ca_system_score_gemma":0.00022302002,"threshold_uncertainty_score":0.8539251},"labels":[],"label_agreement":null},{"id":"W2128941915","doi":"10.1128/ec.5.1.192-202.2006","title":"<i>SST2</i>, a Regulator of G-Protein Signaling for the<i>Candida albicans</i>Mating Response Pathway","year":2006,"lang":"en","type":"article","venue":"Eukaryotic Cell","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":34,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Biotechnology Research Institute","funders":"National Research Council Canada; Canadian Institutes of Health Research; Genomic Health","keywords":"Biology; Candida albicans; Saccharomyces cerevisiae; Fungal protein; Cell biology; Corpus albicans; Heterotrimeric G protein; Signal transduction; Regulation of gene expression; Response regulator; Gene expression; Mutant; Gene; G protein; Genetics","score_opus":0.010035143067640877,"score_gpt":0.2312163932459155,"score_spread":0.2211812501782746,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2128941915","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.990852,0.0012029473,0.0041746297,0.0005684128,0.000077661636,0.0010234958,0.000030831998,0.000046311405,0.0020237288],"genre_scores_gemma":[0.9863961,0.0000038640424,0.0031789076,0.00017293499,0.00018996847,0.00004280415,0.000013429082,0.000031598513,0.009970389],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9984085,0.00009680827,0.0005156799,0.00030293158,0.00034026415,0.00033582893],"domain_scores_gemma":[0.99816304,0.0008809813,0.000197899,0.0005261375,0.00015377936,0.000078179546],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0011462297,0.00017490148,0.00036569952,0.00005226097,0.00015598047,0.000016160446,0.00013830958,0.00008564419,0.00017105747],"category_scores_gemma":[0.00033665897,0.00012471942,0.00024126204,0.00020481992,0.00015230277,0.000047209414,0.000031291624,0.00015485876,0.0000118032385],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.005066872,0.0003490513,0.045175888,0.0007336627,0.0000409643,0.000026965074,0.0003069263,0.00014356796,0.94459826,0.0005188385,0.0014770636,0.0015619501],"study_design_scores_gemma":[0.0033968869,0.0007749191,0.24864732,0.0005187763,0.0002045663,0.000011133712,0.00092933985,0.0016000285,0.73869646,0.0010465607,0.0038455215,0.00032847238],"about_ca_topic_score_codex":0.00019253975,"about_ca_topic_score_gemma":0.000048190665,"teacher_disagreement_score":0.20590177,"about_ca_system_score_codex":0.00006719533,"about_ca_system_score_gemma":0.00024813937,"threshold_uncertainty_score":0.508591},"labels":[],"label_agreement":null},{"id":"W2129127059","doi":"10.1128/ec.00107-09","title":"Forward Genetics in <i>Toxoplasma gondii</i> Reveals a Family of Rhoptry Kinases That Mediates Pathogenesis","year":2009,"lang":"en","type":"review","venue":"Eukaryotic Cell","topic":"Toxoplasma gondii Research Studies","field":"Immunology and Microbiology","cited_by":39,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Structural Genomics Consortium; University of Toronto","funders":"National Institute of Allergy and Infectious Diseases; National Institutes of Health","keywords":"Rhoptry; Biology; Toxoplasma gondii; Kinase; Genetics; Pathogenesis; Protein-Serine-Threonine Kinases; Cell biology; Computational biology; Immunology; Apicomplexa; Protein kinase A; Protozoal disease; Malaria","score_opus":0.041383127581293096,"score_gpt":0.29604197839547025,"score_spread":0.25465885081417716,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2129127059","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0066986345,0.98798954,0.0000055241317,0.000024093633,0.0006961742,0.0015260848,0.00063559605,0.00007534248,0.0023490167],"genre_scores_gemma":[0.0020895961,0.9931536,0.00030080238,0.000060910552,0.000060970746,0.00017318563,0.0005334555,0.00010727904,0.0035202042],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9950668,0.0010055366,0.0015012902,0.0009863474,0.00021563961,0.0012243644],"domain_scores_gemma":[0.9963351,0.0015890483,0.00085593225,0.0010115255,0.000117832395,0.00009056753],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0007746641,0.0009944786,0.0038360714,0.00084594754,0.0001284028,0.000023418705,0.0010933765,0.0012179847,0.00016590631],"category_scores_gemma":[0.00031010827,0.0008238998,0.0008894813,0.00076092716,0.00049315224,0.00006997039,0.00056627323,0.0010752083,0.00073314697],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000089946036,0.0010316775,0.00579843,0.026163457,0.0007902076,0.00031437248,0.00035353834,0.0000083729265,0.0019016947,0.00003108674,0.013586918,0.9499303],"study_design_scores_gemma":[0.0016853039,0.0007052367,0.007702895,0.0092098685,0.001407703,0.00014172366,0.00024871467,7.847752e-7,0.0034909507,0.00013724092,0.97389203,0.0013775739],"about_ca_topic_score_codex":0.000055797416,"about_ca_topic_score_gemma":0.00005004062,"teacher_disagreement_score":0.9603051,"about_ca_system_score_codex":0.00020611098,"about_ca_system_score_gemma":0.00053904415,"threshold_uncertainty_score":0.9994212},"labels":[],"label_agreement":null},{"id":"W2131679039","doi":"10.1128/ec.00147-06","title":"A Novel Class of Developmentally Regulated Noncoding RNAs in <i>Leishmania</i>","year":2006,"lang":"en","type":"article","venue":"Eukaryotic Cell","topic":"Research on Leishmaniasis Studies","field":"Medicine","cited_by":56,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"Canadian Institutes of Health Research; University of Manitoba; Burroughs Wellcome Fund","keywords":"Biology; Small nucleolar RNA; Amastigote; RNA; Antisense RNA; Sense (electronics); Non-coding RNA; Leishmania; Leishmania infantum; Long non-coding RNA; Gene; Genetics; Cell biology; Molecular biology; Parasite hosting; Leishmaniasis","score_opus":0.019378355105605552,"score_gpt":0.25823989469652353,"score_spread":0.238861539590918,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2131679039","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8950287,0.00042129756,0.00023147218,0.0008543406,0.00010250509,0.000518329,0.0000054948964,0.000055616452,0.10278226],"genre_scores_gemma":[0.987851,0.00006200512,0.006133008,0.00017765013,0.00008580589,0.000016758631,0.000025642796,0.00003775089,0.005610379],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9979389,0.00003573616,0.00061574526,0.0003501827,0.00056991645,0.00048954244],"domain_scores_gemma":[0.99917597,0.00013307082,0.00013555936,0.0003094046,0.00015103995,0.000094959425],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00040166583,0.00020721764,0.00049941154,0.00029623805,0.00005492452,0.000015679705,0.00016651985,0.00009492498,0.000114689065],"category_scores_gemma":[0.00008818856,0.00019235593,0.00009572539,0.0006175175,0.00013800776,0.00009153613,0.00015632894,0.0002686413,0.00006356715],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00032679958,0.0018201616,0.69930255,0.0005845262,0.00007940014,0.00037514593,0.00056556315,0.00014952043,0.28271624,0.00045657248,0.012027812,0.0015957158],"study_design_scores_gemma":[0.0037218742,0.00017163547,0.9072863,0.00026789107,0.0000310512,0.000058799862,0.00024299005,0.00042879695,0.08602884,0.000068077235,0.0014972322,0.0001965376],"about_ca_topic_score_codex":0.0007265033,"about_ca_topic_score_gemma":0.00050178514,"teacher_disagreement_score":0.20798373,"about_ca_system_score_codex":0.0002923163,"about_ca_system_score_gemma":0.0002319023,"threshold_uncertainty_score":0.78440475},"labels":[],"label_agreement":null},{"id":"W2133364518","doi":"10.1128/ec.4.6.1137-1146.2005","title":"Unique Mitochondrial Genome Structure in Diplonemids, the Sister Group of Kinetoplastids","year":2005,"lang":"en","type":"article","venue":"Eukaryotic Cell","topic":"Protist diversity and phylogeny","field":"Biochemistry, Genetics and Molecular Biology","cited_by":99,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canadian Institute for Advanced Research; Université de Montréal","funders":"Canadian Institutes of Health Research; Akademie Věd České Republiky; Dalhousie University; Canadian Institute for Advanced Research","keywords":"Biology; Mitochondrial DNA; Trans-splicing; Genetics; Genome; Gene; Kinetoplast; Minicircle; Mitochondrion; RNA; DNA; RNA splicing","score_opus":0.004542980268501349,"score_gpt":0.1892104678887343,"score_spread":0.18466748762023294,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2133364518","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.996706,0.00047140635,0.00031051194,0.0001430863,0.00018082582,0.00021627144,0.000059118993,0.0000043839245,0.0019083926],"genre_scores_gemma":[0.99723154,0.00004593163,0.00127245,0.000239573,0.00039367794,0.0000033102178,0.000084871026,0.000009974714,0.00071865355],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9993007,0.000061917104,0.00016118733,0.00020643321,0.0000944615,0.00017529434],"domain_scores_gemma":[0.99957156,0.000020797634,0.000059901722,0.00028521466,0.00002270361,0.000039815375],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000058783622,0.000116089184,0.00011711753,0.00002850974,0.000039498183,0.000008750689,0.00027831356,0.00012910871,0.00011650437],"category_scores_gemma":[0.000018790955,0.00009199124,0.00006756347,0.00007768077,0.00008592896,0.0000032347934,0.00013923041,0.0001245385,0.000009782033],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00022946148,0.00015611328,0.10405384,0.00005277958,0.000029751509,0.000007118467,0.00025001264,0.001157228,0.89189696,0.00020834849,0.0014831566,0.00047524803],"study_design_scores_gemma":[0.0018983757,0.0003851878,0.68929785,0.000019855743,0.00004219917,0.000017842296,0.000068455854,0.0000893509,0.29043192,0.00034776516,0.017043214,0.0003579946],"about_ca_topic_score_codex":0.000026640624,"about_ca_topic_score_gemma":0.00021407129,"teacher_disagreement_score":0.60146505,"about_ca_system_score_codex":0.000013868404,"about_ca_system_score_gemma":0.00002809182,"threshold_uncertainty_score":0.3751294},"labels":[],"label_agreement":null},{"id":"W2135052838","doi":"10.1128/ec.00195-06","title":"The <i>Tetrahymena thermophila</i> Phagosome Proteome","year":2006,"lang":"en","type":"article","venue":"Eukaryotic Cell","topic":"Bacteriophages and microbial interactions","field":"Environmental Science","cited_by":76,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"York University","funders":"Natural Sciences and Engineering Research Council of Canada; Genome Canada; Canadian Institutes of Health Research; Eli Lilly Canada; Eli Lilly and Company; National Science Foundation","keywords":"Phagosome; Tetrahymena; Phagocytosis; Biology; Proteome; Cell biology; Proteomics; Biochemistry; Gene","score_opus":0.002518085273853851,"score_gpt":0.17041261481340744,"score_spread":0.16789452953955358,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2135052838","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8139414,0.00017142697,0.00013717612,0.00066388265,0.0004688562,0.00030232905,0.000006171907,0.000055164932,0.18425354],"genre_scores_gemma":[0.9526713,0.00001077901,0.00017349604,0.00015295713,0.00013116357,0.000016459815,0.000005309365,0.000016597623,0.046821937],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9991945,0.000029274928,0.00016886002,0.00020465691,0.00010441605,0.00029831586],"domain_scores_gemma":[0.99955946,0.000050476836,0.000061268314,0.00027531842,0.000004018214,0.000049440936],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00008998727,0.000120687364,0.00007467311,0.000008976179,0.0004136764,0.00010770758,0.0002531348,0.00003534051,0.0030237192],"category_scores_gemma":[0.0000040702334,0.00008116924,0.00007178606,0.00012623185,0.00020671627,0.0001352348,0.00008153589,0.00013634026,0.0035161136],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00001615997,0.00022687257,0.013675746,0.000007474592,0.0000066507805,0.00002323967,0.00014652936,0.00026265308,0.9329462,0.00016580765,0.049560938,0.002961724],"study_design_scores_gemma":[0.00032674242,0.000066188746,0.7660144,0.0000073901683,0.000017278837,0.000031942844,0.000035134275,0.000082474726,0.08574313,0.0011354351,0.14628136,0.00025850852],"about_ca_topic_score_codex":0.0003918575,"about_ca_topic_score_gemma":0.00012532217,"teacher_disagreement_score":0.8472031,"about_ca_system_score_codex":0.00005703475,"about_ca_system_score_gemma":0.0000081297785,"threshold_uncertainty_score":0.9978877},"labels":[],"label_agreement":null},{"id":"W2135178701","doi":"10.1128/ec.00285-09","title":"Effect of Starvation on the Endocytic Pathway in Dictyostelium Cells","year":2010,"lang":"en","type":"article","venue":"Eukaryotic Cell","topic":"Cellular transport and secretion","field":"Biochemistry, Genetics and Molecular Biology","cited_by":26,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval; Institut universitaire de cardiologie et de pneumologie de Québec","funders":"Fondation Ernst et Lucie Schmidheiny","keywords":"Dictyostelium; Endocytic cycle; Starvation; Cell biology; Biology; Endocytosis; Cell; Genetics; Gene","score_opus":0.003966958365267249,"score_gpt":0.19369802324166308,"score_spread":0.18973106487639582,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2135178701","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9959912,0.00004943692,0.00025004393,0.000039809784,0.0002953078,0.0002724462,0.0000071159625,0.0000049627583,0.0030896831],"genre_scores_gemma":[0.9991175,0.000018842344,0.000022091188,0.00005834336,0.00008792322,0.000010307628,0.00030886746,0.000013473009,0.00036267054],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9993,0.00007538691,0.00017554847,0.00018259986,0.000121405836,0.0001450588],"domain_scores_gemma":[0.9995142,0.00006585691,0.000060631206,0.00030821457,0.000020229574,0.000030827236],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00038811195,0.000113418166,0.000109709654,0.000035615372,0.000027019778,0.000006586009,0.00013190956,0.00010120344,0.00008997496],"category_scores_gemma":[0.000027064174,0.00007907047,0.000076207034,0.00007561991,0.000050830302,0.0000019230579,0.000017828694,0.00016758069,0.000022188724],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011395333,0.00005548895,0.011645607,0.000037784197,0.0000040531727,0.0000039192305,0.00005318027,0.00005713772,0.98749274,0.00006486534,0.0000351285,0.00043616685],"study_design_scores_gemma":[0.00053480186,0.0005821933,0.009581459,0.000009495365,0.000007941987,0.0000010361604,0.0000137728875,0.00014001022,0.9873209,0.000016574499,0.001708208,0.000083632876],"about_ca_topic_score_codex":0.000023687673,"about_ca_topic_score_gemma":0.000075033684,"teacher_disagreement_score":0.0031262878,"about_ca_system_score_codex":0.000006104648,"about_ca_system_score_gemma":0.000031100197,"threshold_uncertainty_score":0.32244003},"labels":[],"label_agreement":null},{"id":"W2136601028","doi":"10.1128/ec.00109-10","title":"Spitzenkörper, Exocyst, and Polarisome Components in Candida albicans Hyphae Show Different Patterns of Localization and Have Distinct Dynamic Properties","year":2010,"lang":"en","type":"article","venue":"Eukaryotic Cell","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":95,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Biotechnology and Biological Sciences Research Council; Canadian Institutes of Health Research; University of Sheffield; Wellcome Trust","keywords":"Exocyst; Fluorescence recovery after photobleaching; Cell biology; Biology; Vesicle; Candida albicans; Secretory Vesicle; Exocytosis; Biophysics; Secretion; Microbiology; Biochemistry; Membrane","score_opus":0.01468724940605614,"score_gpt":0.23028329703519096,"score_spread":0.2155960476291348,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2136601028","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9983079,0.00043674512,0.00043532992,0.00011949036,0.00008984095,0.0003832828,0.00002644005,0.000014327854,0.00018665768],"genre_scores_gemma":[0.99899507,0.00011103654,0.00003702973,0.0000477288,0.00002129668,0.0000056717595,0.00004754309,0.000017177303,0.0007174243],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99895674,0.000039577844,0.00030053564,0.00029068213,0.00020583048,0.00020662119],"domain_scores_gemma":[0.99947244,0.00004174349,0.00007294668,0.0002439392,0.000041363273,0.00012755148],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00011566379,0.00016526575,0.00036047128,0.00007908218,0.000047264697,0.000015184076,0.000055315697,0.00008884019,0.000079531485],"category_scores_gemma":[0.000051485164,0.00012331434,0.000035425284,0.00005014431,0.00017524371,0.000057215857,0.000060669467,0.0002364273,0.0000014782787],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00016667448,0.000278401,0.952474,0.0005423807,0.000009447445,0.000016727581,0.0004926416,0.0000011294196,0.045198258,0.0000075827807,0.0000058640744,0.00080691377],"study_design_scores_gemma":[0.0012925118,0.00016431243,0.9893398,0.00017652399,0.00004659841,0.000011001654,0.00033780394,0.0053624082,0.0031050777,0.00002400161,0.000016499589,0.00012342822],"about_ca_topic_score_codex":0.0015283757,"about_ca_topic_score_gemma":0.009447101,"teacher_disagreement_score":0.04209318,"about_ca_system_score_codex":0.0000457612,"about_ca_system_score_gemma":0.000032580152,"threshold_uncertainty_score":0.52717036},"labels":[],"label_agreement":null},{"id":"W2137723347","doi":"10.1128/ec.00021-12","title":"Motor Protein Myo5p Is Required To Maintain the Regulatory Circuit Controlling <i>WOR1</i> Expression in Candida albicans","year":2012,"lang":"en","type":"article","venue":"Eukaryotic Cell","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Biotechnology Research Institute; McGill University; Royal Victoria Hospital","funders":"Canadian Institutes of Health Research","keywords":"Biology; Candida albicans; Cell biology; Ectopic expression; Mating type; Gene expression; Phenotype; Mutant; Fungal protein; Phenotypic switching; Gene; Genetics","score_opus":0.017972540574087106,"score_gpt":0.2497343727542642,"score_spread":0.2317618321801771,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2137723347","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98838407,0.0011003856,0.0011752255,0.0013699704,0.00017100059,0.0017947959,0.000013406343,0.00004759244,0.005943566],"genre_scores_gemma":[0.987651,0.000013626684,0.00039376057,0.0022450387,0.00033007443,0.00009439154,0.0000075756598,0.000035014255,0.009229552],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99787956,0.0001568339,0.00044139058,0.0003744033,0.00046477435,0.0006830365],"domain_scores_gemma":[0.99857384,0.00014377639,0.000096541495,0.00077286694,0.000060296523,0.00035266887],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010546837,0.00022388955,0.00040488582,0.00008546725,0.00013046847,0.000020808673,0.00018933401,0.00012641754,0.00057161256],"category_scores_gemma":[0.00019206319,0.000155869,0.0001399597,0.00026188637,0.000099901124,0.00012449865,0.00006714215,0.00032932888,0.00015929036],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0012832585,0.0005508584,0.58169186,0.00027258645,0.00002609294,0.000055645716,0.0037645919,0.000013808911,0.4056095,0.00041025985,0.0048712674,0.0014502493],"study_design_scores_gemma":[0.0029659923,0.00030659398,0.8996654,0.0006348403,0.00007521696,0.000008515745,0.0020308634,0.00015022264,0.08861848,0.0003898126,0.004767703,0.00038632407],"about_ca_topic_score_codex":0.00018408081,"about_ca_topic_score_gemma":0.00009731846,"teacher_disagreement_score":0.31797355,"about_ca_system_score_codex":0.0002876032,"about_ca_system_score_gemma":0.00015999758,"threshold_uncertainty_score":0.63561535},"labels":[],"label_agreement":null},{"id":"W2138028750","doi":"10.1128/ec.00001-09","title":"Iron Activates In Vivo DNA Binding of <i>Schizosaccharomyces pombe</i> Transcription Factor Fep1 through Its Amino-Terminal Region","year":2009,"lang":"en","type":"article","venue":"Eukaryotic Cell","topic":"Fungal and yeast genetics research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":49,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Sherbrooke","funders":"","keywords":"Biology; Chromatin immunoprecipitation; Schizosaccharomyces pombe; Repressor; Psychological repression; Transcription factor; Chromatin; Schizosaccharomyces; Promoter; Molecular biology; Zinc finger; DNA-binding protein; Binding site; Biochemistry; Mutant; Gene expression; Gene","score_opus":0.021149741128011143,"score_gpt":0.25997845220926663,"score_spread":0.23882871108125547,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2138028750","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9962068,0.000587675,0.00008096277,0.00011650377,0.00010898629,0.00021412196,0.000025441232,0.000009495338,0.0026499946],"genre_scores_gemma":[0.99712914,0.00063858787,0.00017884994,0.000060745177,0.00012418545,0.0000051945176,0.000042295494,0.000017603008,0.0018033948],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99872464,0.00007178164,0.00026689994,0.0003677278,0.0002224888,0.00034645427],"domain_scores_gemma":[0.99953914,0.000015495987,0.000087027,0.00023705745,0.000048364873,0.00007293751],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00007814295,0.00019093446,0.00019607643,0.00007840096,0.000048438164,0.000020622345,0.00022761711,0.00016591465,0.000059847796],"category_scores_gemma":[0.000018726212,0.0001797861,0.000100792146,0.00015957716,0.00004777921,0.0000145716,0.00003980203,0.00015082656,0.000013323229],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00019381462,0.00022195601,0.004340921,0.00008821053,0.000006564534,0.000020127158,0.00017717064,0.000032279608,0.99369216,0.000022900764,0.00016812581,0.0010357822],"study_design_scores_gemma":[0.00066826935,0.00065937627,0.019683681,0.00005233143,0.000008836391,0.000020828444,0.00007932463,0.000054622687,0.97812873,0.000052303934,0.00039951561,0.00019219451],"about_ca_topic_score_codex":0.000016848888,"about_ca_topic_score_gemma":0.000010038494,"teacher_disagreement_score":0.015563431,"about_ca_system_score_codex":0.00002328005,"about_ca_system_score_gemma":0.00005181144,"threshold_uncertainty_score":0.7331465},"labels":[],"label_agreement":null},{"id":"W2138175622","doi":"10.1128/ec.1.2.304-310.2002","title":"Evolutionary Analyses of the Small Subunit of Glutamate Synthase: Gene Order Conservation, Gene Fusions, and Prokaryote-to- Eukaryote Lateral Gene Transfers","year":2002,"lang":"en","type":"article","venue":"Eukaryotic Cell","topic":"Genomics and Phylogenetic Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":46,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University; Canadian Institute for Advanced Research","funders":"","keywords":"Biology; Horizontal gene transfer; Gene; Prokaryote; Genetics; Operon; Eukaryote; Genome; Phylogenetic tree; Gene cluster; Gene family; Escherichia coli","score_opus":0.02447846414608026,"score_gpt":0.2283608527173703,"score_spread":0.20388238857129004,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2138175622","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9915219,0.006499876,0.00036291563,0.00054312777,0.00015548286,0.00042392054,0.00022176153,0.000004691076,0.00026634528],"genre_scores_gemma":[0.99294543,0.0018312146,0.003993677,0.00031595211,0.00008003301,0.000017366672,0.000047265243,0.000028974368,0.0007400872],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9985937,0.00010630928,0.0004639142,0.0003872442,0.00017081304,0.00027804612],"domain_scores_gemma":[0.9989872,0.00003544992,0.00014452927,0.0004939151,0.00023661666,0.000102316764],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014141745,0.00024501377,0.00030790464,0.00007544438,0.00015251811,0.0000100184925,0.00027710196,0.00012029909,0.00005888154],"category_scores_gemma":[0.00004824572,0.0001978628,0.00013192247,0.0002829216,0.00021547698,0.0000020187051,0.00020994792,0.00007955114,0.0000041803364],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006058145,0.00014625097,0.08063234,0.00006971615,0.00014531949,0.0000026026962,0.000202716,0.0012845622,0.9165609,0.000007837029,0.00058237574,0.0003048021],"study_design_scores_gemma":[0.00063574675,0.0002772481,0.35114333,0.000018932275,0.00013697192,0.000020179663,0.00003898453,0.0007331474,0.6463028,0.000041989322,0.0004268452,0.00022383213],"about_ca_topic_score_codex":0.00020644887,"about_ca_topic_score_gemma":0.000052226176,"teacher_disagreement_score":0.27051097,"about_ca_system_score_codex":0.000012405848,"about_ca_system_score_gemma":0.00006662075,"threshold_uncertainty_score":0.8068611},"labels":[],"label_agreement":null},{"id":"W2138874841","doi":"10.1128/ec.00334-13","title":"Using Aspergillus nidulans To Identify Antifungal Drug Resistance Mutations","year":2013,"lang":"en","type":"article","venue":"Eukaryotic Cell","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":25,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"Canadian Institutes of Health Research","keywords":"Aspergillus nidulans; Biology; Antifungal drug; Antifungal; Drug resistance; Echinocandins; Aspergillus; Drug; Mutation; Fungal protein; Genetics; Microbiology; Computational biology; Saccharomyces cerevisiae; Gene; Amphotericin B; Pharmacology; Mutant","score_opus":0.029371114975714485,"score_gpt":0.31971670346358505,"score_spread":0.29034558848787057,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2138874841","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9660242,0.00035412487,0.0027589377,0.0011133079,0.0003228733,0.00078462076,0.000013352495,0.00010340042,0.028525138],"genre_scores_gemma":[0.9406991,0.00001347496,0.008775056,0.00066023413,0.0001575891,0.000016812679,0.000027968132,0.000037687314,0.04961209],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9980813,0.00006605898,0.0004238458,0.0005036674,0.00044810685,0.0004770022],"domain_scores_gemma":[0.998567,0.00010383937,0.00007964497,0.00063173065,0.00025356567,0.00036425662],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.0002355245,0.00022225472,0.00035894435,0.00013368778,0.00021374393,0.00007487202,0.00016228527,0.00007979182,0.002023124],"category_scores_gemma":[0.00015939982,0.00020541468,0.00016094522,0.00044305588,0.00010601489,0.00019853495,0.00006391943,0.0002396732,0.0019113293],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00020282005,0.0006668664,0.7820402,0.0005977808,0.00007807669,0.00023878264,0.0015273807,0.00016339858,0.15210806,0.00033749794,0.06141172,0.00062743685],"study_design_scores_gemma":[0.000710037,0.00004470375,0.9861599,0.00017013549,0.000113616705,0.0000118925445,0.0007286384,0.0005135974,0.009840893,0.0003669942,0.0010520434,0.00028752533],"about_ca_topic_score_codex":0.0002886065,"about_ca_topic_score_gemma":0.00024361591,"teacher_disagreement_score":0.20411974,"about_ca_system_score_codex":0.00017501679,"about_ca_system_score_gemma":0.00016542243,"threshold_uncertainty_score":0.99888915},"labels":[],"label_agreement":null},{"id":"W2139090922","doi":"10.1128/ec.00002-07","title":"Crm1-Mediated Nuclear Export of the <i>Schizosaccharomyces pombe</i> Transcription Factor Cuf1 during a Shift from Low to High Copper Concentrations","year":2007,"lang":"en","type":"article","venue":"Eukaryotic Cell","topic":"Trace Elements in Health","field":"Nursing","cited_by":22,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Sherbrooke","funders":"Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research","keywords":"Nuclear export signal; Schizosaccharomyces pombe; Nuclear transport; Biology; Nuclear localization sequence; Cell nucleus; Nuclear protein; Green fluorescent protein; Transcription factor; Schizosaccharomyces; Transcription (linguistics); Gene expression; Molecular biology; Cell biology; Mutant; Gene; Biochemistry; Nucleus","score_opus":0.010036563949170688,"score_gpt":0.23448018948752053,"score_spread":0.22444362553834984,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2139090922","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99371684,0.00009162244,0.00010651468,0.0016443095,0.0026523194,0.000871421,0.00028204778,0.00014015609,0.0004947729],"genre_scores_gemma":[0.99763316,0.000007022236,0.0008771829,0.0010066611,0.00026030812,0.0000072699227,0.000047505873,0.00006244522,0.00009842806],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9976699,0.000106831896,0.0007067688,0.00041015845,0.00053228205,0.00057410245],"domain_scores_gemma":[0.9987373,0.00021151705,0.00023526247,0.00052360346,0.00005951451,0.00023283958],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00020353725,0.0002464008,0.00029809482,0.00008867413,0.0002621865,0.00004004754,0.0003737115,0.00013446639,0.0008367986],"category_scores_gemma":[0.000058073205,0.00021473502,0.00012295731,0.0003394418,0.00008741217,0.00020525868,0.000043301046,0.0003309136,0.0001577868],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000757615,0.0007801531,0.34929514,0.0002260443,0.00005233788,0.000015011285,0.013842131,0.00013851315,0.6327094,0.00016134816,0.0014832158,0.0005390895],"study_design_scores_gemma":[0.0011313045,0.000109405686,0.7902031,0.000111494955,0.00004299398,0.0000012467906,0.00041869894,0.000023604995,0.20734839,0.0000454617,0.00037178144,0.00019250074],"about_ca_topic_score_codex":0.0007190651,"about_ca_topic_score_gemma":0.00045866214,"teacher_disagreement_score":0.44090798,"about_ca_system_score_codex":0.00022095325,"about_ca_system_score_gemma":0.000060554623,"threshold_uncertainty_score":0.91623574},"labels":[],"label_agreement":null},{"id":"W2139566104","doi":"10.1128/ec.00263-12","title":"Role of Cytosolic Glyceraldehyde-3-Phosphate Dehydrogenase in Visceral Organ Infection by Leishmania donovani","year":2012,"lang":"en","type":"article","venue":"Eukaryotic Cell","topic":"Research on Leishmaniasis Studies","field":"Medicine","cited_by":29,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"Canadian Institutes of Health Research","keywords":"Leishmania donovani; Biology; Glyceraldehyde 3-phosphate dehydrogenase; Dehydrogenase; Biochemistry; Glyceraldehyde; Mutant; Glycolysis; Cytosol; Molecular biology; Enzyme; Visceral leishmaniasis; Immunology; Leishmaniasis; Gene","score_opus":0.011280467853569218,"score_gpt":0.2613258042077883,"score_spread":0.25004533635421905,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2139566104","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9845447,0.0040590335,0.000022753751,0.0002875698,0.0001591961,0.00062728854,0.000010888816,0.00007867141,0.010209918],"genre_scores_gemma":[0.9970482,0.0007696161,0.00023269665,0.00020153771,0.00025032158,0.000037294587,0.00003996811,0.000063641004,0.0013566972],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99764216,0.00010569405,0.00055180304,0.00034091828,0.0005060385,0.0008533608],"domain_scores_gemma":[0.99884814,0.000090731744,0.00015654175,0.0004499954,0.00011893526,0.00033566396],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0004518189,0.0002913611,0.00057681114,0.0002659668,0.00008264182,0.000019629937,0.00014024356,0.0001339386,0.0005648954],"category_scores_gemma":[0.00013284004,0.00026924905,0.00013936401,0.0006285766,0.00013651956,0.00030869624,0.00016424227,0.00040389894,0.00032135472],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00025535142,0.0013053769,0.8794215,0.00021859861,0.00007438759,0.000019737101,0.0008945168,0.000012545589,0.111247495,0.00007246581,0.0049147005,0.0015633418],"study_design_scores_gemma":[0.0027736828,0.00037303966,0.6602541,0.000080000726,0.0000693808,0.000038490347,0.00014944689,0.00020841011,0.33259457,0.00006331927,0.003148585,0.0002469154],"about_ca_topic_score_codex":0.001965342,"about_ca_topic_score_gemma":0.00021260598,"teacher_disagreement_score":0.2213471,"about_ca_system_score_codex":0.00028172557,"about_ca_system_score_gemma":0.00009933568,"threshold_uncertainty_score":0.999976},"labels":[],"label_agreement":null},{"id":"W2140757877","doi":"10.1128/ec.00230-08","title":"Copper Distributed by Atx1 Is Available to Copper Amine Oxidase 1 in <i>Schizosaccharomyces pombe</i>","year":2008,"lang":"en","type":"article","venue":"Eukaryotic Cell","topic":"Microbial metabolism and enzyme function","field":"Biochemistry, Genetics and Molecular Biology","cited_by":27,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Sherbrooke","funders":"Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research","keywords":"Schizosaccharomyces pombe; Schizosaccharomyces; Copper; Amine oxidase; Biology; Biochemistry; Cell biology; Enzyme; Yeast; Chemistry; Saccharomyces cerevisiae","score_opus":0.008532796178545124,"score_gpt":0.197881694286588,"score_spread":0.18934889810804287,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2140757877","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9936773,0.002064603,0.00018324437,0.00032404097,0.0003584624,0.00025668828,0.00045683177,0.000023066395,0.0026557182],"genre_scores_gemma":[0.97279644,0.0006577533,0.00034298122,0.002514682,0.00022846492,0.000021440892,0.001002269,0.000036702666,0.02239928],"study_design_codex":"not_applicable","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99860394,0.0000503111,0.00028147773,0.0005135299,0.00013803804,0.00041271985],"domain_scores_gemma":[0.9992893,0.000010444343,0.00005732678,0.0004080869,0.0000543145,0.00018053401],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0001106628,0.00023654965,0.00023729395,0.00005321142,0.00009419402,0.000015744437,0.0001960381,0.00016134775,0.0008095068],"category_scores_gemma":[0.00003947644,0.00023263387,0.00008002964,0.00023124447,0.00005257586,0.000009005248,0.00011985112,0.00012149067,0.0012914322],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007755687,0.00013467962,0.00936537,0.000011408166,0.000006540507,0.0000072080775,0.00003754558,0.000013823737,0.44320008,6.458758e-7,0.5471133,0.0000318322],"study_design_scores_gemma":[0.0010569039,0.00018078195,0.005922431,0.0000120515515,0.000014293336,0.000024141766,0.000021219807,0.000012007591,0.6068704,0.0000017875903,0.38558185,0.00030209642],"about_ca_topic_score_codex":0.00022350236,"about_ca_topic_score_gemma":0.00002751556,"teacher_disagreement_score":0.16367038,"about_ca_system_score_codex":0.000022943903,"about_ca_system_score_gemma":0.000059969687,"threshold_uncertainty_score":0.99948615},"labels":[],"label_agreement":null},{"id":"W2141091298","doi":"10.1128/ec.00077-08","title":"Heterotrimeric G-Protein Subunit Function in <i>Candida albicans</i> : both the α and β Subunits of the Pheromone Response G Protein Are Required for Mating","year":2008,"lang":"en","type":"article","venue":"Eukaryotic Cell","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":27,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Biotechnology Research Institute","funders":"National Research Council Canada; Canadian Institutes of Health Research","keywords":"Heterotrimeric G protein; Biology; Protein subunit; G protein; Pheromone; Candida albicans; Fungal protein; Function (biology); Gs alpha subunit; Genetics; Cell biology; Saccharomyces cerevisiae; Yeast; Gene; Signal transduction","score_opus":0.025255600274749202,"score_gpt":0.23813713622841134,"score_spread":0.21288153595366213,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2141091298","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99569976,0.0006270013,0.00028272741,0.0008182394,0.0000481746,0.0021738599,0.0000122467145,0.000021143553,0.00031684292],"genre_scores_gemma":[0.9943452,0.000017224986,0.00024520405,0.00020297982,0.00004361566,0.000100958234,0.0000043983423,0.000024759907,0.0050156675],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99844724,0.00031377538,0.0004021401,0.00027793978,0.0002825492,0.00027637606],"domain_scores_gemma":[0.9988421,0.00025511807,0.00023155194,0.0005133166,0.00009121903,0.0000666682],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008215883,0.00016724918,0.00032621925,0.000054946264,0.00021728649,0.000009270939,0.0001301847,0.00008233467,0.000039801704],"category_scores_gemma":[0.00045194605,0.000102862796,0.00010268475,0.0004125929,0.00028597127,0.000071625866,0.000052603038,0.00023650104,0.0000032782627],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.013746813,0.0004885956,0.45859712,0.00093229424,0.000044861667,0.00003648302,0.001931936,0.000016312912,0.5223522,0.000044090848,0.00051492645,0.0012943186],"study_design_scores_gemma":[0.0022410594,0.00061011076,0.94132847,0.00043954074,0.000052329113,0.00001490941,0.0009758885,0.00020153889,0.05371155,0.0001372957,0.00015517265,0.00013213829],"about_ca_topic_score_codex":0.00024800777,"about_ca_topic_score_gemma":0.00022013411,"teacher_disagreement_score":0.48273134,"about_ca_system_score_codex":0.000069088244,"about_ca_system_score_gemma":0.00017835779,"threshold_uncertainty_score":0.4194623},"labels":[],"label_agreement":null},{"id":"W2141209926","doi":"10.1128/ec.00222-06","title":"Analysis of <i>Euglena gracilis</i> Plastid-Targeted Proteins Reveals Different Classes of Transit Sequences","year":2006,"lang":"en","type":"article","venue":"Eukaryotic Cell","topic":"Photosynthetic Processes and Mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":81,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University; University of New Brunswick","funders":"Genome Atlantic; Genome Canada; Canada Research Chairs; Canadian Institute for Advanced Research","keywords":"Plastid; Biology; Euglena gracilis; Transit Peptide; Apicoplast; Signal peptide; Euglena; Protein targeting; Peptide sequence; Genetics; Biochemistry; Cell biology; Membrane protein; Chloroplast; Gene","score_opus":0.005506198199008794,"score_gpt":0.2023120219852136,"score_spread":0.19680582378620481,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2141209926","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98810697,0.0006113604,0.009213657,0.000029994624,0.00006180614,0.00023322516,0.00017080347,0.000010765444,0.0015614134],"genre_scores_gemma":[0.9986107,0.00013691408,0.0003943666,0.000032413645,0.00003978201,0.000018667894,0.00022197772,0.00001473353,0.00053046056],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9987126,0.000051095823,0.00043651654,0.00033735237,0.00022522817,0.00023717828],"domain_scores_gemma":[0.9992218,0.000026533056,0.00024246667,0.00033587075,0.000112497626,0.000060826413],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00011642446,0.00019418873,0.00043057476,0.00012191617,0.000035317385,0.000007686934,0.00023239317,0.00012209867,0.00007191497],"category_scores_gemma":[0.000026525851,0.00016073852,0.00027194762,0.00034089293,0.00009560967,0.0000040327204,0.00004327268,0.000060320177,0.000001331295],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000064043306,0.00029861712,0.00606185,0.00016633289,0.0001935847,0.0000024409928,0.000027494767,0.000764799,0.9922076,0.000051210427,0.00008337219,0.000078668294],"study_design_scores_gemma":[0.00031698943,0.0003108857,0.015495867,0.00002599447,0.00054587505,0.0000018369481,0.000050670802,0.00026031418,0.9824476,0.00024559777,0.00012793017,0.00017041973],"about_ca_topic_score_codex":0.00016925482,"about_ca_topic_score_gemma":0.00016721457,"teacher_disagreement_score":0.010503709,"about_ca_system_score_codex":0.000009077411,"about_ca_system_score_gemma":0.000066734836,"threshold_uncertainty_score":0.65547264},"labels":[],"label_agreement":null},{"id":"W2141347966","doi":"10.1128/ec.00185-07","title":"Peroxisomal Peripheral Membrane Protein YlInp1p Is Required for Peroxisome Inheritance and Influences the Dimorphic Transition in the Yeast <i>Yarrowia lipolytica</i>","year":2007,"lang":"en","type":"article","venue":"Eukaryotic Cell","topic":"Peroxisome Proliferator-Activated Receptors","field":"Biochemistry, Genetics and Molecular Biology","cited_by":18,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"Canadian Institutes of Health Research; Fondation pour la Recherche Médicale; Howard Hughes Medical Institute","keywords":"Peroxisome; Yarrowia; Biology; Organelle; Cell biology; Yeast; Microbody; Biochemistry; Gene","score_opus":0.010970207086739044,"score_gpt":0.2362433974668089,"score_spread":0.22527319038006985,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2141347966","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99452907,0.0015302226,0.00057059724,0.0016796334,0.0001249474,0.0011214085,0.000032347692,0.0000189589,0.0003927979],"genre_scores_gemma":[0.9970293,0.00011143716,0.00042278864,0.0016208938,0.0003578882,0.00015028249,0.000038264556,0.000039349085,0.0002298065],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99822265,0.00013551489,0.00037812575,0.0004986484,0.0002561542,0.0005088794],"domain_scores_gemma":[0.99928606,0.000050186805,0.00010309625,0.0004022683,0.0000667936,0.00009160212],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007564753,0.00028712343,0.00021506248,0.00004974727,0.00023218496,0.00008169751,0.00038866553,0.00022715266,0.000029151444],"category_scores_gemma":[0.000060619583,0.00019345392,0.000113327944,0.00022846421,0.00031195735,0.000026483029,0.00004962585,0.00025741672,0.0000045257757],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00039465592,0.00015247951,0.004194301,0.000084760686,0.000026142101,0.000005847484,0.002096181,0.000028138924,0.99208045,0.000045077937,0.00020090461,0.0006910689],"study_design_scores_gemma":[0.0016492142,0.00062134065,0.012221999,0.000054185868,0.00003444776,0.00004794559,0.0017700217,0.00023344564,0.98002076,0.00014946982,0.0027864561,0.00041068566],"about_ca_topic_score_codex":0.000033258664,"about_ca_topic_score_gemma":0.00009114539,"teacher_disagreement_score":0.012059653,"about_ca_system_score_codex":0.000032095042,"about_ca_system_score_gemma":0.00008077071,"threshold_uncertainty_score":0.7888822},"labels":[],"label_agreement":null},{"id":"W2142432882","doi":"10.1128/ec.5.3.480-487.2006","title":"Role of a Mitogen-Activated Protein Kinase Cascade in Ion Flux-Mediated Turgor Regulation in Fungi","year":2006,"lang":"en","type":"article","venue":"Eukaryotic Cell","topic":"Plant Stress Responses and Tolerance","field":"Agricultural and Biological Sciences","cited_by":45,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"York University","funders":"Australian Research Council; Natural Sciences and Engineering Research Council of Canada; National Institutes of Health","keywords":"Turgor pressure; Biophysics; Depolarization; Biology; Hyperpolarization (physics); Protein kinase A; Ion transporter; Osmoregulation; Cell biology; ATPase; Biochemistry; Chemistry; Kinase; Enzyme; Membrane; Stereochemistry","score_opus":0.0063279475339977805,"score_gpt":0.17776965409638845,"score_spread":0.17144170656239066,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2142432882","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99821174,0.00050602277,5.141094e-7,0.000096832206,0.000033641092,0.00031058368,0.000047203677,0.000020381462,0.00077305804],"genre_scores_gemma":[0.99884444,0.000011651604,0.000026861731,0.000010531385,0.000058430178,0.000016045915,0.00022125574,0.0000010301696,0.0008097395],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9990738,0.00008951162,0.00026675416,0.00020487541,0.00014628068,0.0002187472],"domain_scores_gemma":[0.99969155,0.00011226766,0.00009845555,0.0000441461,0.000019617988,0.00003398941],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000090165915,0.00010884935,0.00016600818,0.00003558792,0.000026652808,0.000011102018,0.00010009512,0.000096066586,0.00018377135],"category_scores_gemma":[0.000019851683,0.00005088882,0.000041199357,0.0004682513,0.000022653312,0.00007300889,0.000021947812,0.000096351774,0.00001786621],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00020956874,0.00016350273,0.040304273,0.000010828668,9.3122634e-7,0.000015012236,0.00003381062,0.00019603768,0.95562667,0.000013255938,0.00004719592,0.0033788916],"study_design_scores_gemma":[0.00023009932,0.000045156135,0.61255765,0.000042960983,0.0000010840877,0.0000012406687,0.00002906411,0.0007801541,0.38587207,0.000096356394,0.00027046874,0.000073702446],"about_ca_topic_score_codex":0.00380824,"about_ca_topic_score_gemma":0.002385297,"teacher_disagreement_score":0.57225335,"about_ca_system_score_codex":0.000031039373,"about_ca_system_score_gemma":0.000009150969,"threshold_uncertainty_score":0.5756945},"labels":[],"label_agreement":null},{"id":"W2142897695","doi":"10.1128/ec.4.12.2029-2043.2005","title":"Serial Analysis of Gene Expression Reveals Conserved Links between Protein Kinase A, Ribosome Biogenesis, and Phosphate Metabolism in <i>Ustilago maydis</i>","year":2005,"lang":"en","type":"article","venue":"Eukaryotic Cell","topic":"Fungal and yeast genetics research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":25,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"BC Cancer Agency; Canada's Michael Smith Genome Sciences Centre; University of British Columbia","funders":"","keywords":"Ustilago; Biology; Mutant; Gene; Cell biology; Wild type; Biochemistry; Genetics","score_opus":0.01204001442940127,"score_gpt":0.24730244872048707,"score_spread":0.2352624342910858,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2142897695","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99289006,0.005997741,0.00016410758,0.000107424785,0.000042209842,0.00038583798,0.00022041827,0.000006957989,0.00018527199],"genre_scores_gemma":[0.9951364,0.0004226417,0.0030085978,0.00006594682,0.00025225987,0.000021431937,0.00034290258,0.00002472305,0.0007251079],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99826676,0.0001722324,0.00045468222,0.00049544685,0.00024332487,0.0003675576],"domain_scores_gemma":[0.99913627,0.00002599629,0.00013477347,0.0004279008,0.00009390875,0.000181158],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00038379952,0.00021795141,0.00044377532,0.00021420252,0.00005013994,0.000023097195,0.00024101131,0.00030553993,0.00007546897],"category_scores_gemma":[0.00004449157,0.00020122273,0.00014575398,0.00045701378,0.00011253827,0.0000065004197,0.00021047938,0.00016301962,0.000007712178],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00017122897,0.00012132313,0.060499746,0.000058829082,0.00010540178,0.0000054846505,0.00004427605,0.00038932057,0.93775636,0.0000039654087,0.00009497011,0.0007490876],"study_design_scores_gemma":[0.000923797,0.00009403048,0.13132198,0.000020320427,0.00018060685,6.552536e-7,0.000019262761,0.00015089485,0.8666252,0.00002149011,0.00044904536,0.00019270796],"about_ca_topic_score_codex":0.00009637514,"about_ca_topic_score_gemma":0.000056809895,"teacher_disagreement_score":0.071131155,"about_ca_system_score_codex":0.0000123933005,"about_ca_system_score_gemma":0.000071868984,"threshold_uncertainty_score":0.8205625},"labels":[],"label_agreement":null},{"id":"W2143695631","doi":"10.1128/ec.00299-13","title":"Endosymbiotic Gene Transfer in Tertiary Plastid-Containing Dinoflagellates","year":2013,"lang":"en","type":"article","venue":"Eukaryotic Cell","topic":"Protist diversity and phylogeny","field":"Biochemistry, Genetics and Molecular Biology","cited_by":68,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University; University of British Columbia; Canadian Institute for Advanced Research","funders":"","keywords":"Plastid; Dinoflagellate; Biology; Peridinin; Haptophyte; Horizontal gene transfer; Endosymbiosis; Genome; Nuclear gene; Gene; Evolutionary biology; Lineage (genetic); Genetics; Botany; Algae; Ecology; Chloroplast; Phytoplankton","score_opus":0.005305884027057699,"score_gpt":0.18052402513357105,"score_spread":0.17521814110651335,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2143695631","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9950281,0.00046984156,0.00041064346,0.000080779515,0.00014171234,0.00028640375,0.000009810615,0.00001389277,0.0035588644],"genre_scores_gemma":[0.99827826,0.0000666496,0.00030232212,0.0003095276,0.00010095239,0.000012038053,0.00007507413,0.000016942902,0.00083825854],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99905115,0.000051793144,0.00017158005,0.0003167434,0.00008605887,0.00032267568],"domain_scores_gemma":[0.99962115,0.000022582624,0.000019286872,0.00021952909,0.000023323273,0.00009411545],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00008121551,0.00015975728,0.00013145128,0.000053002164,0.000057327205,0.000027808857,0.00020978795,0.00013285916,0.00032027916],"category_scores_gemma":[0.000014201943,0.00016301694,0.00007549915,0.000067168585,0.000050916427,0.00000725277,0.00008569774,0.000117040916,0.00024142065],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000036551013,0.000091109396,0.5559289,0.000028405397,0.000017907394,0.00002499626,0.00011508376,0.00009627441,0.44243893,0.0000073385563,0.0007988834,0.00041560066],"study_design_scores_gemma":[0.0007306813,0.00015315223,0.5356125,0.000010531792,0.000011105323,0.000009313221,0.000056815148,0.00012170321,0.462939,0.00004666982,0.00011665121,0.00019185939],"about_ca_topic_score_codex":0.00014626735,"about_ca_topic_score_gemma":0.000024406409,"teacher_disagreement_score":0.020500064,"about_ca_system_score_codex":0.00001532527,"about_ca_system_score_gemma":0.00003582994,"threshold_uncertainty_score":0.6647638},"labels":[],"label_agreement":null},{"id":"W2143712580","doi":"10.1128/ec.3.1.190-199.2004","title":"<i>Candida albicans</i> Lacking the Gene Encoding the Regulatory Subunit of Protein Kinase A Displays a Defect in Hyphal Formation and an Altered Localization of the Catalytic Subunit","year":2004,"lang":"en","type":"article","venue":"Eukaryotic Cell","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":75,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"National Institute of Allergy and Infectious Diseases; National Institutes of Health; Medical Research Council Canada; Medical Research Council; Universidad de Buenos Aires; Agencia Nacional de Promoción Científica y Tecnológica; Consejo Nacional de Investigaciones Científicas y Técnicas","keywords":"Biology; Protein kinase A; Protein subunit; Candida albicans; Fusion protein; Mutant; Cyclin-dependent kinase complex; Molecular biology; Mitogen-activated protein kinase kinase; Cell biology; Biochemistry; Kinase; Gene; Genetics; Recombinant DNA","score_opus":0.013948206708435296,"score_gpt":0.24035294852488046,"score_spread":0.22640474181644515,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2143712580","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9967665,0.00044035105,0.0011785774,0.00018510895,0.000032801974,0.0008893764,0.000008152286,0.0000082439965,0.00049091],"genre_scores_gemma":[0.9996746,0.000026727892,0.00003870772,0.00010914743,0.00003646777,0.000013701732,0.000019021474,0.000012316733,0.00006930454],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99886477,0.00015149634,0.0003609451,0.00016487943,0.000283453,0.00017443163],"domain_scores_gemma":[0.9991094,0.00008712167,0.00018957825,0.0004947643,0.00007338038,0.000045764293],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006488315,0.00011972646,0.00020407361,0.00004917663,0.00013166037,0.000012769771,0.00014822137,0.000052482985,0.000009856209],"category_scores_gemma":[0.000104936305,0.00006401101,0.000078263976,0.0003374698,0.0002662784,0.00013618775,0.000050148115,0.0001722084,9.2195603e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0009489119,0.00073930173,0.81019986,0.0018274639,0.000054693788,0.000022651875,0.014637705,0.0044189403,0.16302516,0.00140636,0.000031942207,0.002687006],"study_design_scores_gemma":[0.0025153304,0.00032110262,0.76561177,0.0007148448,0.00019489821,0.000029087632,0.0024304267,0.0058766226,0.22143574,0.0006738491,0.000035293397,0.00016103085],"about_ca_topic_score_codex":0.0005812573,"about_ca_topic_score_gemma":0.0017172869,"teacher_disagreement_score":0.05841058,"about_ca_system_score_codex":0.000098490884,"about_ca_system_score_gemma":0.00014838942,"threshold_uncertainty_score":0.2610293},"labels":[],"label_agreement":null},{"id":"W2144236385","doi":"10.1128/ec.3.5.1111-1123.2004","title":"Msn2- and Msn4-Like Transcription Factors Play No Obvious Roles in the Stress Responses of the Fungal Pathogen <i>Candida albicans</i>","year":2004,"lang":"en","type":"article","venue":"Eukaryotic Cell","topic":"Fungal and yeast genetics research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":145,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Biotechnology Research Institute","funders":"Biotechnology and Biological Sciences Research Council; Canadian Institutes of Health Research; Stanford Bio-X; Natural Sciences and Engineering Research Council of Canada; Wellcome Trust","keywords":"Candida albicans; Biology; Corpus albicans; Transcription factor; Saccharomyces cerevisiae; Ectopic expression; Zinc finger; Cell biology; Transcription (linguistics); Fungal protein; Microbiology; Genetics; Gene","score_opus":0.00827106795880909,"score_gpt":0.22089089977432366,"score_spread":0.21261983181551458,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2144236385","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99655247,0.0016204537,0.00002724956,0.00015839252,0.00012551303,0.00027352604,0.0001602304,0.0000035315957,0.0010786436],"genre_scores_gemma":[0.99871576,0.00036177482,0.000040123727,0.00014275583,0.000072235176,0.000011500334,0.000041984873,0.0000151947925,0.0005986593],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99882215,0.00019067428,0.00019629757,0.00026311923,0.00026925644,0.0002584892],"domain_scores_gemma":[0.9994525,0.000042452248,0.000051396823,0.0003489361,0.000047752408,0.000056973236],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00022814203,0.00015347997,0.00012763463,0.000037981965,0.00009070131,0.000025423577,0.00034201474,0.00011077874,0.000016262598],"category_scores_gemma":[0.000037961847,0.00009212724,0.00008580792,0.00012356834,0.00017243129,0.000003644049,0.00008377448,0.00016824254,0.000003561338],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00023255504,0.00017865183,0.08729112,0.00004599894,0.000014585478,0.000008187828,0.0008201395,0.00035283057,0.91068643,0.000025080495,0.00011210978,0.00023229551],"study_design_scores_gemma":[0.0012461841,0.0004837692,0.41506147,0.000041814474,0.000025416572,0.000016526566,0.0007184465,0.000018220475,0.58075017,0.00011180473,0.0013394766,0.00018666635],"about_ca_topic_score_codex":0.0001868698,"about_ca_topic_score_gemma":0.00054528133,"teacher_disagreement_score":0.32993627,"about_ca_system_score_codex":0.000013836394,"about_ca_system_score_gemma":0.000115784555,"threshold_uncertainty_score":0.37568396},"labels":[],"label_agreement":null},{"id":"W2145533679","doi":"10.1128/ec.5.3.587-600.2006","title":"Mutational Analysis of the Glycosylphosphatidylinositol (GPI) Anchor Pathway Demonstrates that GPI-Anchored Proteins Are Required for Cell Wall Biogenesis and Normal Hyphal Growth in<i>Neurospora crassa</i>","year":2006,"lang":"en","type":"article","venue":"Eukaryotic Cell","topic":"Fungal and yeast genetics research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":78,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Carleton University","funders":"","keywords":"Neurospora crassa; Crassa; Biology; Mutant; Biogenesis; Cell biology; Cell wall; Fungal protein; Gene; Phenotype; Cell; Biochemistry","score_opus":0.009508447040663006,"score_gpt":0.2139233635876536,"score_spread":0.2044149165469906,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2145533679","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9959483,0.0019010766,0.00037224527,0.00014337538,0.000079004516,0.0007591623,0.00039838895,0.0000071954887,0.00039122734],"genre_scores_gemma":[0.99792844,0.00011080437,0.0008056418,0.00007626013,0.00009735522,0.00008395844,0.00033445682,0.000029449853,0.00053361105],"study_design_codex":"observational","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.998236,0.00009225033,0.00039858033,0.0005273742,0.00033796777,0.00040780695],"domain_scores_gemma":[0.99909353,0.00006753873,0.00022970415,0.00031846864,0.00019550399,0.00009524401],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00021679723,0.00024761647,0.00031380763,0.00014439337,0.00012643795,0.00004304113,0.00031599923,0.00017573289,0.000014926601],"category_scores_gemma":[0.000038613274,0.00020066816,0.00025407798,0.0005332456,0.00017311657,0.000010363271,0.00014040813,0.00010302878,0.0000016371654],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001943912,0.0003316781,0.51458645,0.00012574381,0.00007385803,0.000007934013,0.000026928054,0.0008512472,0.4834529,0.000024213288,0.00017121923,0.00015345668],"study_design_scores_gemma":[0.00070944417,0.00014796457,0.39377725,0.000010058827,0.00010426978,0.0000023434268,0.000035759425,0.0013118074,0.60361373,0.00008249713,0.000053896252,0.00015095514],"about_ca_topic_score_codex":0.0002311329,"about_ca_topic_score_gemma":0.00034596407,"teacher_disagreement_score":0.12080919,"about_ca_system_score_codex":0.000020325284,"about_ca_system_score_gemma":0.00015153996,"threshold_uncertainty_score":0.818301},"labels":[],"label_agreement":null},{"id":"W2146233866","doi":"10.1128/ec.00131-06","title":"The <i>vtc4</i> Gene Influences Polyphosphate Storage, Morphogenesis, and Virulence in the Maize Pathogen <i>Ustilago maydis</i>","year":2006,"lang":"en","type":"article","venue":"Eukaryotic Cell","topic":"Fungal and yeast genetics research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":44,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canada's Michael Smith Genome Sciences Centre; University of British Columbia","funders":"","keywords":"Biology; Ustilago; Mutant; Vacuole; Cell biology; Saccharomyces cerevisiae; Fungal protein; Ectopic expression; Protein kinase A; Gene; Biochemistry; Kinase","score_opus":0.0047711608255466996,"score_gpt":0.2112176356872458,"score_spread":0.2064464748616991,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2146233866","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97292864,0.023898857,0.00007426742,0.00033617325,0.00012536514,0.0003011222,0.0000551767,0.0000074735312,0.0022729384],"genre_scores_gemma":[0.9940738,0.0031186363,0.0002202364,0.00052534486,0.00023612943,0.000045089382,0.00005572867,0.000021875547,0.0017031344],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9983399,0.00017698208,0.00026311888,0.00040756725,0.00032821193,0.0004842542],"domain_scores_gemma":[0.9992335,0.0000795958,0.000068355555,0.0004916542,0.00005347207,0.00007341081],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00056315446,0.0002070954,0.00012801801,0.00002934035,0.00027346736,0.000118971664,0.00056591,0.00010683232,0.000011458873],"category_scores_gemma":[0.000027430118,0.00012822937,0.00006493924,0.00020261176,0.0002608627,0.000005467551,0.00021978827,0.00016013306,0.00002548218],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010394805,0.000114822855,0.05697203,0.000029262135,0.000010844363,0.00005083846,0.00005158239,0.0007141019,0.9371107,0.00009413645,0.0033653325,0.0013823719],"study_design_scores_gemma":[0.00092190487,0.00029307598,0.35389948,0.00001796978,0.00003171102,0.00008293462,0.00027060593,0.00032589136,0.61786276,0.0005529229,0.025286978,0.00045378105],"about_ca_topic_score_codex":0.00025986496,"about_ca_topic_score_gemma":0.00020704385,"teacher_disagreement_score":0.319248,"about_ca_system_score_codex":0.0000111658255,"about_ca_system_score_gemma":0.00008519943,"threshold_uncertainty_score":0.5229042},"labels":[],"label_agreement":null},{"id":"W2146394896","doi":"10.1128/ec.00122-14","title":"The Underlying Structure of Adaptation under Strong Selection in 12 Experimental Yeast Populations","year":2014,"lang":"en","type":"article","venue":"Eukaryotic Cell","topic":"Evolution and Genetic Dynamics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":43,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Biology; Adaptation (eye); Genetics; Population; Sexual reproduction; Selection (genetic algorithm); Evolutionary biology; Mutation; Asexual reproduction; Local adaptation; Gene; Allele; Mutant; Experimental evolution","score_opus":0.0214834329746962,"score_gpt":0.2686801023336811,"score_spread":0.2471966693589849,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2146394896","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9538107,0.00017155537,0.04477455,0.00003419741,0.00012089636,0.00009403537,0.0000033412416,0.0000046798564,0.0009860726],"genre_scores_gemma":[0.9983206,0.000007922681,0.0011360034,0.00002673723,0.000042912798,0.0000019463878,0.00005789469,0.000008980611,0.0003969956],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9994889,0.000055404267,0.00014263854,0.00012379934,0.00007926228,0.00011002408],"domain_scores_gemma":[0.9997891,0.000007351009,0.00005957094,0.00009862316,0.000022216904,0.00002312821],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000060881048,0.0000665467,0.000052565214,0.000023963048,0.000076161894,0.00001023463,0.00006478756,0.000059379792,0.000013605401],"category_scores_gemma":[0.000011858245,0.000057970767,0.00002892366,0.000056827317,0.000034697925,0.0000025707582,0.000023033706,0.000051878313,0.0000015134177],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000039639956,0.0000837803,0.033158287,0.000011182314,0.000011699332,7.161689e-8,0.00018396796,0.21960877,0.7409729,0.004665867,0.0001662476,0.0010975908],"study_design_scores_gemma":[0.0010091742,0.0003041135,0.72331494,0.000011420988,0.000016429143,0.000005828075,0.0019838663,0.20572163,0.06592989,0.0011315467,0.00035067313,0.00022047231],"about_ca_topic_score_codex":0.000051578645,"about_ca_topic_score_gemma":0.0015191267,"teacher_disagreement_score":0.6901567,"about_ca_system_score_codex":0.000022425342,"about_ca_system_score_gemma":0.000029200828,"threshold_uncertainty_score":0.23639792},"labels":[],"label_agreement":null},{"id":"W2146523084","doi":"10.1128/ec.00166-09","title":"Role of Ferroxidases in Iron Uptake and Virulence of <i>Cryptococcus neoformans</i>","year":2009,"lang":"en","type":"article","venue":"Eukaryotic Cell","topic":"Fungal Infections and Studies","field":"Medicine","cited_by":123,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canada's Michael Smith Genome Sciences Centre; University of British Columbia","funders":"National Institute of Allergy and Infectious Diseases; National Institutes of Health; University of British Columbia; Chung-Ang University","keywords":"Cryptococcus neoformans; Virulence; Biology; Transferrin; Mutant; Intracellular; Microbiology; Cryptococcosis; Protein subunit; Heme; Antifungal drug; Fungal protein; Biochemistry; Candida albicans; Enzyme; Gene","score_opus":0.007550030310939193,"score_gpt":0.23215518219202916,"score_spread":0.22460515188108995,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2146523084","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9707969,0.0019735724,0.000010173596,0.00007451863,0.00002790477,0.00017708408,0.0000036948975,0.000009931382,0.02692621],"genre_scores_gemma":[0.99891305,0.000426625,0.00030479362,0.000084138905,0.000017977016,0.0000028084962,0.0000017687946,0.000003901229,0.00024494441],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9994494,0.000009320202,0.00022802435,0.00010213809,0.00008877456,0.00012237919],"domain_scores_gemma":[0.9997191,0.00003340715,0.000054486893,0.00012368502,0.000032211658,0.000037118843],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000077155026,0.00007830707,0.0002314184,0.00007995029,0.000020767993,0.0000020004713,0.000027901635,0.000034154902,0.000039621456],"category_scores_gemma":[0.00002082152,0.00006516644,0.00003681125,0.00013712728,0.00005713244,0.000039718565,0.000017786439,0.00007792043,0.0000041875724],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00028729724,0.0014706156,0.68010217,0.0005417617,0.000021378133,0.000023820163,0.0019080515,0.00012939371,0.28571677,0.00064956566,0.00061619247,0.028532952],"study_design_scores_gemma":[0.0007021264,0.0007083002,0.95928675,0.00012087021,0.000029141234,0.000008292185,0.00034235415,0.0001783498,0.03808758,0.00020240554,0.00027391425,0.000059916187],"about_ca_topic_score_codex":0.00008787204,"about_ca_topic_score_gemma":0.000021050193,"teacher_disagreement_score":0.27918455,"about_ca_system_score_codex":0.000012761274,"about_ca_system_score_gemma":0.000018727496,"threshold_uncertainty_score":0.26574102},"labels":[],"label_agreement":null},{"id":"W2147532728","doi":"10.1128/ec.00222-08","title":"The Synthetic Genetic Network around <i>PKC1</i> Identifies Novel Modulators and Components of Protein Kinase C Signaling in <i>Saccharomyces cerevisiae</i>","year":2008,"lang":"en","type":"article","venue":"Eukaryotic Cell","topic":"Fungal and yeast genetics research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":23,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Biotechnology and Biological Sciences Research Council","keywords":"Mutant; Saccharomyces cerevisiae; Biology; Genetics; GTPase; Gene; Signal transduction; Epistasis; Genetic screen; Protein kinase C; Cell biology; Computational biology","score_opus":0.015223748416976221,"score_gpt":0.21998390886575686,"score_spread":0.20476016044878065,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2147532728","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98861516,0.010327284,0.00015270575,0.000052789255,0.00010202964,0.00042307028,0.000009719426,0.0000057938305,0.00031145217],"genre_scores_gemma":[0.9973561,0.001160868,0.00064595725,0.000029892537,0.00014407595,0.000027959455,0.000015539732,0.0000286168,0.0005909661],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99839354,0.000105345185,0.00038707998,0.00039304575,0.0002919636,0.00042900775],"domain_scores_gemma":[0.9992529,0.000060773327,0.0001151552,0.00039411316,0.000070414375,0.00010663661],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00029523452,0.00020132045,0.00021978168,0.000043716267,0.00021659664,0.00003758625,0.00031621914,0.00010240957,0.000007009327],"category_scores_gemma":[0.000040735576,0.00016134701,0.00007888405,0.00017439648,0.00031803545,0.0000049672885,0.00025576045,0.00015324271,0.0000069425546],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000092541224,0.00013943686,0.03747801,0.00011352261,0.000026075228,0.000015345566,0.00005501805,0.0035247537,0.95810294,0.000019749097,0.00009910651,0.000333515],"study_design_scores_gemma":[0.0013935551,0.0003557356,0.094394505,0.00019928964,0.000027353033,0.00007117955,0.00015451168,0.0024073839,0.8991546,0.00032755474,0.0010562373,0.00045806935],"about_ca_topic_score_codex":0.00007350817,"about_ca_topic_score_gemma":0.000024355819,"teacher_disagreement_score":0.058948297,"about_ca_system_score_codex":0.000011799142,"about_ca_system_score_gemma":0.00006147557,"threshold_uncertainty_score":0.65795404},"labels":[],"label_agreement":null},{"id":"W2147666607","doi":"10.1128/ec.5.2.277-292.2006","title":"Copper Induces Cytoplasmic Retention of Fission Yeast Transcription Factor Cuf1","year":2006,"lang":"en","type":"article","venue":"Eukaryotic Cell","topic":"Trace Elements in Health","field":"Nursing","cited_by":36,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Sherbrooke","funders":"Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research","keywords":"Schizosaccharomyces pombe; Nuclear localization sequence; Biology; Nuclear transport; Cytoplasm; Transcription factor; Cytosol; Gene; Gene expression; Transport protein; Nuclear pore; Amino acid; Cell nucleus; Transcription (linguistics); Cell biology; Mutant; Biochemistry","score_opus":0.023029210799624344,"score_gpt":0.2593236742713983,"score_spread":0.23629446347177396,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2147666607","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99325025,0.00018838742,0.00017423731,0.00044749829,0.0017660408,0.00035641956,0.000046066438,0.00009037129,0.0036807093],"genre_scores_gemma":[0.9979351,0.000008137496,0.000868541,0.000064248154,0.00019009513,0.000005282268,0.00007090592,0.00003173596,0.0008259216],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9985103,0.00010744661,0.00046207497,0.00027439545,0.0003425479,0.00030320525],"domain_scores_gemma":[0.99941117,0.000041262625,0.00019357189,0.00024178585,0.000049628816,0.00006261015],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015007668,0.00015507333,0.00020142748,0.00013126145,0.00009607357,0.00001880965,0.00012587129,0.00012535209,0.00036469896],"category_scores_gemma":[0.00001265999,0.00015494433,0.00008902908,0.00017390282,0.000046508438,0.00018671302,0.000012828506,0.0001924482,0.00009479219],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00023184427,0.00058175984,0.12636109,0.00044741837,0.000007950933,0.0000037887103,0.0006078376,0.0001658797,0.8571978,0.000088172106,0.007968511,0.006337953],"study_design_scores_gemma":[0.0008955542,0.00024903266,0.6456393,0.00011153255,0.000035075092,0.000003448295,0.000120561475,0.00019408681,0.35156032,0.00024436397,0.0007833919,0.00016329341],"about_ca_topic_score_codex":0.00029187376,"about_ca_topic_score_gemma":0.000073687945,"teacher_disagreement_score":0.5192782,"about_ca_system_score_codex":0.00014788432,"about_ca_system_score_gemma":0.000028594266,"threshold_uncertainty_score":0.63184464},"labels":[],"label_agreement":null},{"id":"W2149095341","doi":"10.1128/ec.00219-06","title":"Production of Tyrosol by <i>Candida albicans</i> Biofilms and Its Role in Quorum Sensing and Biofilm Development","year":2006,"lang":"en","type":"article","venue":"Eukaryotic Cell","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":245,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"","keywords":"Tyrosol; Farnesol; Biofilm; Quorum sensing; Microbiology; Candida albicans; Hypha; Biology; Yeast; Biochemistry; Corpus albicans; Chemistry; Bacteria; Genetics","score_opus":0.005823519772646664,"score_gpt":0.20858141696742083,"score_spread":0.20275789719477416,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2149095341","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9944324,0.0029494087,0.000021086815,0.00029682132,0.00006249932,0.00028806104,0.000004201729,0.000016378006,0.0019291831],"genre_scores_gemma":[0.99594325,0.00011977797,0.00067727745,0.00005825402,0.000035271103,0.0000015507866,0.000023348637,0.0000112692305,0.0031299843],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9990112,0.000025744965,0.00028901693,0.00030417967,0.00015966473,0.00021016726],"domain_scores_gemma":[0.9996706,0.000025665402,0.00006654762,0.0001290926,0.00004439148,0.000063684376],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00020130145,0.00012255956,0.00024334296,0.000064724976,0.000046397046,0.000007905509,0.000022093065,0.000065525404,0.000018464865],"category_scores_gemma":[0.000029182374,0.000109353074,0.000019460545,0.00015210111,0.00007678911,0.0000498289,0.000025932022,0.00010385724,0.0000039919714],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011234941,0.000158725,0.55342627,0.00024856292,0.0000061301316,0.000009449525,0.00021831298,0.0000016973545,0.44210654,0.000008916262,0.0008983004,0.0028047562],"study_design_scores_gemma":[0.0006573034,0.000077004006,0.5753758,0.00011121828,0.000021384803,0.0000129484815,0.00027229916,0.00015505015,0.42263293,0.000022326905,0.0005455039,0.00011620419],"about_ca_topic_score_codex":0.00034313928,"about_ca_topic_score_gemma":0.0003804382,"teacher_disagreement_score":0.021949563,"about_ca_system_score_codex":0.000044126158,"about_ca_system_score_gemma":0.00007878757,"threshold_uncertainty_score":0.4459289},"labels":[],"label_agreement":null},{"id":"W2149352515","doi":"10.1128/ec.00004-15","title":"Eaf1 Links the NuA4 Histone Acetyltransferase Complex to Htz1 Incorporation and Regulation of Purine Biosynthesis","year":2015,"lang":"en","type":"article","venue":"Eukaryotic Cell","topic":"Genomics and Chromatin Dynamics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":20,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Montreal Clinical Research Institute; Université Laval; Hôtel-Dieu de Québec","funders":"Canadian Institutes of Health Research; Canada Research Chairs","keywords":"Biology; Histone acetyltransferase; Histone; Chromatin immunoprecipitation; Chromatin; Acetyltransferase; RNA polymerase II; Cell biology; Transcription factor; Regulation of gene expression; Chromatin remodeling; Promoter; Gene expression; Gene; Molecular biology; Acetylation; Genetics","score_opus":0.015764385434070737,"score_gpt":0.23043810722928507,"score_spread":0.21467372179521432,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2149352515","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9933225,0.00021584654,0.004055966,0.0006725663,0.00006876772,0.0002077544,0.000019974927,0.000005816048,0.0014307931],"genre_scores_gemma":[0.9956233,0.000036611713,0.0033387218,0.0001249979,0.00007510304,0.000005441507,0.0001100458,0.0000139992235,0.00067180936],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99939317,0.000039519517,0.00019117388,0.00017385549,0.00009738486,0.00010489549],"domain_scores_gemma":[0.9994767,0.0000120413515,0.00007003847,0.00027951546,0.000079982965,0.000081728176],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00019624022,0.0000990559,0.00010846203,0.000028792374,0.00004451559,0.0000133457415,0.00011392774,0.00009765938,0.00001260322],"category_scores_gemma":[0.000028058532,0.00008168445,0.0000328371,0.00006879256,0.00006038394,0.0000026354066,0.000065609944,0.00005323246,0.0000070165997],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008080442,0.00008924273,0.0027892208,0.000038663027,0.00001799803,6.962421e-7,0.00035090523,0.0015275741,0.99018025,0.00017401349,0.0031778594,0.0015727627],"study_design_scores_gemma":[0.0017161337,0.0010347584,0.12662648,0.000028875344,0.00010764446,0.000025336585,0.0004540592,0.013408292,0.84271723,0.0010283646,0.012333945,0.00051889336],"about_ca_topic_score_codex":0.000035795354,"about_ca_topic_score_gemma":0.000056890065,"teacher_disagreement_score":0.14746304,"about_ca_system_score_codex":0.000016143036,"about_ca_system_score_gemma":0.00005093698,"threshold_uncertainty_score":0.3330995},"labels":[],"label_agreement":null},{"id":"W2149896027","doi":"10.1128/ec.3.5.1272-1286.2004","title":"Functional Characterization of Myosin I Tail Regions in <i>Candida albicans</i>","year":2004,"lang":"en","type":"article","venue":"Eukaryotic Cell","topic":"Fungal and yeast genetics research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":26,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Biotechnology Research Institute","funders":"Canadian Institutes of Health Research","keywords":"Myosin; Biology; Cell biology; Hypha; Actin; Candida albicans; Endocytosis; Fungal protein; Mutant; Biochemistry; Cell; Microbiology; Gene","score_opus":0.010379788025917009,"score_gpt":0.21797351872374907,"score_spread":0.20759373069783205,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2149896027","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9941409,0.00014571467,0.002013551,0.00026268687,0.000106119296,0.0001222507,0.000020532794,0.0000041047174,0.0031841437],"genre_scores_gemma":[0.99669737,0.00016268277,0.00015907084,0.00011965163,0.00011074518,0.000010434265,0.00029008658,0.000012760253,0.002437197],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9992721,0.000028215627,0.00016834676,0.00020393508,0.00015062207,0.00017676492],"domain_scores_gemma":[0.9996433,0.000005378399,0.000044731198,0.00019045018,0.000056465073,0.000059667404],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00008452055,0.00008578177,0.00009125669,0.000059786835,0.000028387565,0.000007395678,0.00010422715,0.00007956285,0.00008368403],"category_scores_gemma":[0.000015618578,0.00008514738,0.000047903817,0.00015369715,0.00006321761,0.0000027128501,0.000059955873,0.000077619545,0.000025012127],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006561245,0.00017496226,0.010961299,0.000023795315,0.000006282315,0.0000032364246,0.000028500435,0.00052734895,0.98766637,0.00015718215,0.00016279034,0.000222638],"study_design_scores_gemma":[0.00094346417,0.0002013104,0.2028993,0.000019222165,0.0000051196043,0.000006115682,0.00002398186,0.000025721982,0.79395443,0.00020019426,0.0016057611,0.00011535602],"about_ca_topic_score_codex":0.000045583918,"about_ca_topic_score_gemma":0.00004072766,"teacher_disagreement_score":0.1937119,"about_ca_system_score_codex":0.000018815052,"about_ca_system_score_gemma":0.00014508997,"threshold_uncertainty_score":0.34722093},"labels":[],"label_agreement":null},{"id":"W2149987266","doi":"10.1128/ec.4.7.1203-1210.2005","title":"Release from Quorum-Sensing Molecules Triggers Hyphal Formation during <i>Candida albicans</i> Resumption of Growth","year":2005,"lang":"en","type":"article","venue":"Eukaryotic Cell","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":147,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Biotechnology Research Institute","funders":"Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research","keywords":"Farnesol; Quorum sensing; Biology; Candida albicans; Cell biology; Hypha; Schizosaccharomyces pombe; Morphogenesis; Microbiology; Corpus albicans; Psychological repression; Gene; Gene expression; Mutant; Genetics; Biochemistry; Virulence","score_opus":0.008982315350419049,"score_gpt":0.22460892825059767,"score_spread":0.21562661290017862,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2149987266","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9908068,0.000602043,0.0017559052,0.0004092496,0.000075226926,0.00025057033,0.000020039151,0.0000547525,0.0060253907],"genre_scores_gemma":[0.9958268,0.00020967402,0.0027859106,0.0001910796,0.00018680484,0.0000013978373,0.00007866226,0.000020138825,0.0006995665],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99859065,0.000060865903,0.00046951804,0.00026863505,0.00035232218,0.0002579826],"domain_scores_gemma":[0.9991836,0.00008423433,0.00016910062,0.00031778213,0.00010939235,0.00013590664],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00016479394,0.00015648262,0.00030491425,0.0000928429,0.000085511514,0.0000125285305,0.00006539629,0.00009229301,0.00015056146],"category_scores_gemma":[0.00011098008,0.00014585878,0.00014517596,0.00015384915,0.00008301435,0.00020748026,0.000024247227,0.00018204591,0.00006721215],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0051513873,0.0009785417,0.24522339,0.0012358503,0.00011856733,0.00019957473,0.0025576805,0.00022944149,0.7244969,0.00013997522,0.0039447346,0.015723977],"study_design_scores_gemma":[0.0030795538,0.00014256978,0.54329425,0.00025483547,0.00017820927,0.00001647184,0.0004993828,0.0032661927,0.44871005,0.0001636486,0.00016882225,0.00022600472],"about_ca_topic_score_codex":0.00031404026,"about_ca_topic_score_gemma":0.00013310961,"teacher_disagreement_score":0.29807088,"about_ca_system_score_codex":0.0001682363,"about_ca_system_score_gemma":0.00007064869,"threshold_uncertainty_score":0.59479487},"labels":[],"label_agreement":null},{"id":"W2150781278","doi":"10.1128/ec.00231-06","title":"The Multifunctional β-Oxidation Enzyme Is Required for Full Symptom Development by the Biotrophic Maize Pathogen <i>Ustilago maydis</i>","year":2006,"lang":"en","type":"article","venue":"Eukaryotic Cell","topic":"Fungal and yeast genetics research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":45,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canada's Michael Smith Genome Sciences Centre; University of British Columbia","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Ustilago; Biology; Virulence; Mutant; Gene; Peroxisome; Microbiology; Hypha; Fatty acid; Pathogen; Biochemistry","score_opus":0.008996500246915595,"score_gpt":0.2241948460016326,"score_spread":0.215198345754717,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2150781278","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98250246,0.0040709004,0.0086501455,0.0013332427,0.0004634611,0.0008299431,0.00018169775,0.000019896683,0.0019482727],"genre_scores_gemma":[0.97288597,0.00017161472,0.0011659166,0.00038619427,0.00057491375,0.00015619943,0.0011494076,0.000037586284,0.023472171],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9984935,0.000066341614,0.00028125182,0.00038097633,0.00030645344,0.00047149515],"domain_scores_gemma":[0.9992381,0.000077397024,0.00008607491,0.00037348777,0.00014668144,0.000078311576],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003846585,0.00018603723,0.000096472526,0.000020539672,0.0005092842,0.00008200697,0.00034425405,0.00012681501,0.000045275992],"category_scores_gemma":[0.000031348918,0.000118111544,0.000104002196,0.00009628477,0.00012427155,0.0000034767609,0.00013969616,0.00009652346,0.000073106545],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00018094726,0.000092658855,0.00087668066,0.00002448424,0.000027364194,7.3747566e-7,0.000024143326,0.00011037701,0.9366324,0.00004291513,0.060138036,0.0018492558],"study_design_scores_gemma":[0.000702711,0.00016650038,0.0039720195,0.000006490127,0.000018385503,0.000008104887,0.00004450057,0.000608629,0.7448256,0.0001424082,0.24930729,0.00019734644],"about_ca_topic_score_codex":0.00001814299,"about_ca_topic_score_gemma":0.000028250073,"teacher_disagreement_score":0.19180678,"about_ca_system_score_codex":0.000042106964,"about_ca_system_score_gemma":0.0001746619,"threshold_uncertainty_score":0.4816449},"labels":[],"label_agreement":null},{"id":"W2150817808","doi":"10.1128/ec.00326-10","title":"Do Red and Green Make Brown?: Perspectives on Plastid Acquisitions within Chromalveolates","year":2011,"lang":"en","type":"review","venue":"Eukaryotic Cell","topic":"Microbial Community Ecology and Physiology","field":"Environmental Science","cited_by":143,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Simon Fraser University; University of Alberta; Boise State University","keywords":"Biology; Plastid; Extant taxon; Chloroplast; Red algae; Green algae; Algae; Evolutionary biology; Genome; Phylum; Botany; Ecology; Gene; Genetics","score_opus":0.02715538041461617,"score_gpt":0.2530663518139193,"score_spread":0.2259109713993031,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2150817808","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0075993277,0.90891933,0.0000021299252,0.00003354748,0.00029571564,0.0006873049,0.00009315655,0.00007134607,0.08229817],"genre_scores_gemma":[0.005823527,0.9901069,0.0002236995,0.000097212534,0.00008732224,0.000026572616,0.00011921236,0.000043290227,0.0034722805],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99834555,0.00044104725,0.00031628084,0.0005254403,0.000069248395,0.00030244424],"domain_scores_gemma":[0.9987985,0.0003122129,0.00022674946,0.00054426497,0.0000060402667,0.000112258436],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00019365667,0.00038282183,0.00076358643,0.000078741,0.0003141946,0.000018752306,0.00046449492,0.00036133587,0.014851019],"category_scores_gemma":[0.000021912638,0.00032119642,0.00017908945,0.00016915999,0.00050242606,0.00005036851,0.0005004283,0.0006996301,0.0020156275],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00083813694,0.010317836,0.008427387,0.03364666,0.002562664,0.00063645793,0.07313057,0.0001941562,0.0008561822,0.0077248327,0.14367159,0.71799356],"study_design_scores_gemma":[0.0010119923,0.002691762,0.020794963,0.003885069,0.0014399902,0.0003434093,0.0008446818,0.000018913954,0.000024693345,0.004625651,0.961932,0.002386891],"about_ca_topic_score_codex":0.00024864986,"about_ca_topic_score_gemma":0.0002567135,"teacher_disagreement_score":0.8182604,"about_ca_system_score_codex":0.000121560166,"about_ca_system_score_gemma":0.00003066443,"threshold_uncertainty_score":0.999924},"labels":[],"label_agreement":null},{"id":"W2151187587","doi":"10.1128/ec.3.1.157-169.2004","title":"A Non-Long Terminal Repeat Retrotransposon Family Is Restricted to the Germ Line Micronucleus of the Ciliated Protozoan <i>Tetrahymena thermophila</i>","year":2004,"lang":"en","type":"article","venue":"Eukaryotic Cell","topic":"Parasitic Infections and Diagnostics","field":"Immunology and Microbiology","cited_by":56,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University; York University","funders":"Canadian Institutes of Health Research; York University","keywords":"Biology; Macronucleus; Retrotransposon; Retroposon; Tetrahymena; Genetics; Transposable element; Long terminal repeat; Genome; DNA; Gene","score_opus":0.008820361351160913,"score_gpt":0.2220519428406081,"score_spread":0.2132315814894472,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2151187587","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99054706,0.0005355787,0.00027835497,0.0011869374,0.00076057087,0.00157536,0.00009664276,0.000051420117,0.0049680914],"genre_scores_gemma":[0.99692756,0.000055501037,0.000110256005,0.0012276284,0.0000651323,0.00006554151,0.000029032377,0.000027445714,0.0014919251],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99855024,0.00011103596,0.00045655904,0.00034893365,0.000087311615,0.0004459194],"domain_scores_gemma":[0.99873525,0.00013459026,0.00016964159,0.00079011987,0.00012968385,0.00004073632],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015715764,0.00025327582,0.0002861252,0.000085147345,0.00034805242,0.0000188731,0.0004892339,0.00022276472,0.000120510595],"category_scores_gemma":[0.00007741223,0.0001556565,0.00018574206,0.00054282544,0.0002370007,0.000040381725,0.00008993995,0.00046378752,0.00034681143],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00042186823,0.0012243679,0.061473425,0.00010093121,0.00018017783,0.0000802068,0.0032643692,0.00061289367,0.92428035,0.00011870479,0.007177366,0.0010653285],"study_design_scores_gemma":[0.0018967782,0.0005851233,0.62275225,0.00016039266,0.00014992841,0.00012635649,0.00008955095,0.000006861538,0.37187493,0.000094297815,0.0020278823,0.0002356383],"about_ca_topic_score_codex":0.00066035177,"about_ca_topic_score_gemma":0.000065332926,"teacher_disagreement_score":0.5612788,"about_ca_system_score_codex":0.00009766448,"about_ca_system_score_gemma":0.00020565237,"threshold_uncertainty_score":0.63474876},"labels":[],"label_agreement":null},{"id":"W2151220492","doi":"10.1128/ec.00060-12","title":"The Monothiol Glutaredoxin Grx4 Exerts an Iron-Dependent Inhibitory Effect on Php4 Function","year":2012,"lang":"en","type":"article","venue":"Eukaryotic Cell","topic":"Trace Elements in Health","field":"Nursing","cited_by":44,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Sherbrooke","funders":"","keywords":"Glutaredoxin; Schizosaccharomyces pombe; Bimolecular fluorescence complementation; Complementation; Biology; Thioredoxin; Schizosaccharomyces; Transcription factor; Protein-fragment complementation assay; Transcription (linguistics); Two-hybrid screening; Gene; Biochemistry; Cell biology; Saccharomyces cerevisiae; Mutant","score_opus":0.011238169099444237,"score_gpt":0.26085289394030686,"score_spread":0.2496147248408626,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2151220492","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9801703,0.0010320263,0.00007760474,0.00038973757,0.012542843,0.0009839764,0.0000061953947,0.00023643397,0.004560857],"genre_scores_gemma":[0.9963185,0.000015136783,0.000100234625,0.00065126317,0.0018464476,0.00006108474,0.000020264666,0.00008359207,0.000903434],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9970102,0.00062814145,0.0004082358,0.00041716915,0.00061546755,0.0009208418],"domain_scores_gemma":[0.99803656,0.0006336509,0.0001819137,0.0008085739,0.000028161945,0.0003111273],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0014072169,0.0003189705,0.0002301085,0.00009052479,0.00061332155,0.00007966971,0.00028248262,0.00015684868,0.00015908603],"category_scores_gemma":[0.00007103674,0.00023940229,0.000093833514,0.000127964,0.00007053214,0.0003501965,0.00006155784,0.00054179435,0.0009090886],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.005272915,0.0035680297,0.57975894,0.0007076874,0.00007717523,0.00002616357,0.007141164,0.0010956529,0.019540118,0.00043638627,0.038303312,0.34407243],"study_design_scores_gemma":[0.004448213,0.008464376,0.81835043,0.00020545749,0.00029815323,0.00002688528,0.0009554178,0.0005150938,0.14262539,0.00032737435,0.022637036,0.0011461535],"about_ca_topic_score_codex":0.00012887717,"about_ca_topic_score_gemma":0.000074614116,"teacher_disagreement_score":0.34292626,"about_ca_system_score_codex":0.00048452994,"about_ca_system_score_gemma":0.000028731027,"threshold_uncertainty_score":0.9998688},"labels":[],"label_agreement":null},{"id":"W2152207303","doi":"10.1128/ec.1.1.95-104.2002","title":"CDC42 Is Required for Polarized Growth in Human Pathogen <i>Candida albicans</i>","year":2002,"lang":"en","type":"article","venue":"Eukaryotic Cell","topic":"Fungal and yeast genetics research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":110,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Biotechnology Research Institute","funders":"","keywords":"Biology; Candida albicans; CDC42; Ectopic expression; Corpus albicans; Saccharomyces cerevisiae; Cell biology; Molecular biology; Cell growth; Phenotype; Complementation; Multinucleate; Cell division; Gene; Genetics; GTPase; Cell","score_opus":0.018788996110448885,"score_gpt":0.2535172560803397,"score_spread":0.23472825996989083,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2152207303","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9727829,0.0023487569,0.0007130994,0.00060457084,0.00017613944,0.00076506514,0.00023111694,0.00001987048,0.02235849],"genre_scores_gemma":[0.9846385,0.0002181546,0.00066130055,0.00056699646,0.00023877503,0.00005521983,0.00018890425,0.000040433326,0.013391732],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9985377,0.00006079722,0.00026049916,0.00046266877,0.00019164504,0.00048664797],"domain_scores_gemma":[0.9993568,0.00002089692,0.00005109746,0.00034567187,0.00008110245,0.00014444099],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00018973235,0.00018498872,0.00018889086,0.00007597625,0.00010068602,0.00003237851,0.00030594371,0.00016501792,0.00036202924],"category_scores_gemma":[0.000043130538,0.00018210079,0.00013127757,0.00015042535,0.000071525625,0.0000035810463,0.00012681863,0.000118445925,0.00005415025],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000066158966,0.00020231323,0.011299434,0.00006151612,0.000016347649,0.000009192857,0.000093283634,0.0000041550743,0.98068345,0.000048998718,0.0071728234,0.00034231972],"study_design_scores_gemma":[0.0044965385,0.0010633644,0.007305157,0.000028101715,0.000029161745,0.000011942229,0.00006813159,0.00079574354,0.9639,0.0007837599,0.020918781,0.0005993058],"about_ca_topic_score_codex":0.000068972375,"about_ca_topic_score_gemma":0.00003140215,"teacher_disagreement_score":0.016783444,"about_ca_system_score_codex":0.000022680308,"about_ca_system_score_gemma":0.000034850593,"threshold_uncertainty_score":0.7425855},"labels":[],"label_agreement":null},{"id":"W2152275986","doi":"10.1128/ec.4.1.95-102.2005","title":"Cyclin Cln3p Links G <sub>1</sub> Progression to Hyphal and Pseudohyphal Development in <i>Candida albicans</i>","year":2005,"lang":"en","type":"article","venue":"Eukaryotic Cell","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":87,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Biotechnology Research Institute","funders":"Stanford Bio-X; Natural Sciences and Engineering Research Council of Canada; Burroughs Wellcome Fund","keywords":"Biology; Hypha; Candida albicans; Cell cycle; Cell biology; Cyclin; Yeast; Corpus albicans; Cell growth; Cell Cycle Protein; Cell; Microbiology; Genetics","score_opus":0.009521632120324603,"score_gpt":0.26138974599344694,"score_spread":0.25186811387312236,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2152275986","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9929389,0.0007234425,0.00036930168,0.0013266738,0.000102240694,0.00069632754,0.0000030376582,0.000058347912,0.0037817457],"genre_scores_gemma":[0.9907477,0.000108288055,0.006466782,0.001396406,0.00020646695,0.000033020635,0.0000195048,0.000029564686,0.0009922793],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9979722,0.000052780415,0.0005068977,0.0005579282,0.00040643942,0.0005037372],"domain_scores_gemma":[0.99908566,0.00007716335,0.00006497966,0.00031241553,0.00006021334,0.00039955124],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00044063828,0.00024979436,0.0004030952,0.00013750042,0.000093431474,0.000025232666,0.000101148464,0.00021578859,0.00009375755],"category_scores_gemma":[0.00007901413,0.00021469228,0.00006257386,0.00026365262,0.000083261904,0.000091861984,0.00009785506,0.00048429708,0.0002396203],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006784881,0.00080057175,0.7385073,0.000215266,0.000015596026,0.00013735582,0.0011492241,0.000017639528,0.055811558,0.000014519303,0.0018625938,0.2007899],"study_design_scores_gemma":[0.0020558746,0.0002627393,0.82780224,0.00030688973,0.000030631818,0.000026753893,0.00012757607,0.00016235736,0.16328949,0.000014263171,0.005640298,0.00028086713],"about_ca_topic_score_codex":0.000016875169,"about_ca_topic_score_gemma":0.00047665887,"teacher_disagreement_score":0.20050903,"about_ca_system_score_codex":0.00020831115,"about_ca_system_score_gemma":0.0002692692,"threshold_uncertainty_score":0.8754897},"labels":[],"label_agreement":null},{"id":"W2152701278","doi":"10.1128/ec.00048-09","title":"Transducin Beta-Like Gene <i>FTL1</i> Is Essential for Pathogenesis in <i>Fusarium graminearum</i>","year":2009,"lang":"en","type":"article","venue":"Eukaryotic Cell","topic":"Mycotoxins in Agriculture and Food","field":"Agricultural and Biological Sciences","cited_by":87,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"","keywords":"Biology; Mutant; Virulence; Conidiation; Arabidopsis; Gene; Genetics; Insertional mutagenesis; Fusarium; Microbiology","score_opus":0.010415550275881175,"score_gpt":0.19970709180064525,"score_spread":0.18929154152476407,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2152701278","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9912863,0.000953141,0.00009177789,0.0033130597,0.00041339404,0.0007747368,0.00036838476,0.00009288782,0.0027063384],"genre_scores_gemma":[0.99368036,0.00018544427,0.0007974551,0.0029165372,0.0006471355,0.00003365819,0.0004757703,0.000002476798,0.0012611502],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99819624,0.00005570385,0.0003899125,0.00055475195,0.00025103826,0.00055236724],"domain_scores_gemma":[0.99949116,0.00011314826,0.000087375905,0.000118457094,0.00004857461,0.00014130141],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00022090915,0.00027872654,0.00034023676,0.000020907397,0.0001481985,0.00006647108,0.00037223648,0.00019195784,0.00021476707],"category_scores_gemma":[0.0000062383847,0.00011425924,0.00027178656,0.00040370304,0.00003093666,0.00010106379,0.000025791822,0.00014655045,0.000056848185],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006819672,0.0006176853,0.0036316158,0.000017582694,0.000009639914,0.00001907296,0.00021942501,0.000011705831,0.96359664,0.000066750756,0.005200471,0.026541207],"study_design_scores_gemma":[0.0010116417,0.0010971854,0.28551686,0.000012872988,0.00008707387,0.00002038183,0.0001448712,0.00010589649,0.6798905,0.00064485637,0.030761007,0.000706861],"about_ca_topic_score_codex":0.000078569654,"about_ca_topic_score_gemma":0.00011961254,"teacher_disagreement_score":0.28370616,"about_ca_system_score_codex":0.000025791722,"about_ca_system_score_gemma":0.000010605697,"threshold_uncertainty_score":0.46593565},"labels":[],"label_agreement":null},{"id":"W2153276583","doi":"10.1128/ec.00228-12","title":"Microsporidian Infection in a Free-Living Marine Nematode","year":2012,"lang":"en","type":"article","venue":"Eukaryotic Cell","topic":"Parasitic Infections and Diagnostics","field":"Immunology and Microbiology","cited_by":35,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Microsporidia; Biology; Microsporidiosis; Nematode; Obligate; Parasite hosting; Caenorhabditis elegans; Protozoa; Nematode infection; Zoology; Microbiology; Obligate parasite; Host (biology); Virology; Spore; Ecology; Genetics; Gene","score_opus":0.007788987570336682,"score_gpt":0.22658225651378894,"score_spread":0.21879326894345225,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2153276583","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9680084,0.0014063678,0.0003485036,0.000061085266,0.00267445,0.00013250177,0.0000058627343,0.00006243666,0.027300369],"genre_scores_gemma":[0.99530196,0.00016189365,0.00016532412,0.00012711971,0.0001015196,0.00001491222,0.000033839955,0.000014360926,0.0040790704],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9990824,0.00008483702,0.00020987132,0.0001380076,0.000019524081,0.00046540142],"domain_scores_gemma":[0.99937886,0.00025397656,0.000053643384,0.00025725635,0.000021520764,0.000034756486],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00027516103,0.00012722569,0.00016205737,0.00014216959,0.00009336218,0.000010359542,0.00007764334,0.000170911,0.002072782],"category_scores_gemma":[0.00017880544,0.00013157619,0.000055542198,0.00018460074,0.00006425296,0.00014326895,0.00010940022,0.00024842282,0.0019714236],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000005614597,0.0004642692,0.9893065,0.000022729757,0.000011486642,0.000004931119,0.0002533666,0.000023945826,0.0026133899,0.0005882252,0.006219233,0.00048627562],"study_design_scores_gemma":[0.00054725364,0.000038836133,0.9860634,0.000033473374,0.00002387331,0.00012341942,0.00003152917,0.000006119666,0.008545025,0.00015204823,0.0042774463,0.00015758081],"about_ca_topic_score_codex":0.0025663178,"about_ca_topic_score_gemma":0.00046142147,"teacher_disagreement_score":0.027293535,"about_ca_system_score_codex":0.000070905844,"about_ca_system_score_gemma":0.000031356205,"threshold_uncertainty_score":0.99883944},"labels":[],"label_agreement":null},{"id":"W2153515433","doi":"10.1128/ec.00024-09","title":"Endoplasmic Reticulum-Associated Secretory Proteins Sec20p, Sec39p, and Dsl1p Are Involved in Peroxisome Biogenesis","year":2009,"lang":"en","type":"article","venue":"Eukaryotic Cell","topic":"Peroxisome Proliferator-Activated Receptors","field":"Biochemistry, Genetics and Molecular Biology","cited_by":70,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"Canadian Institutes of Health Research; Fondation pour la Recherche Médicale; Howard Hughes Medical Institute","keywords":"Peroxisome; Endoplasmic reticulum; Biology; Cell biology; Secretory pathway; Biogenesis; Secretory protein; Calnexin; Green fluorescent protein; Golgi apparatus; Saccharomyces cerevisiae; Protein targeting; Organelle biogenesis; Unfolded protein response; Peroxisomal targeting signal; Membrane protein; Biochemistry; Yeast; Secretion; Gene","score_opus":0.00670973386773305,"score_gpt":0.20171194624355424,"score_spread":0.1950022123758212,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2153515433","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99620706,0.0018819254,0.000026110412,0.00027716177,0.00016226464,0.00059789466,0.00004521939,0.00006169179,0.0007406734],"genre_scores_gemma":[0.9976839,0.00048817912,0.0002891167,0.00049892976,0.00014732168,0.0000419522,0.00018810743,0.00005213337,0.00061040604],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9978179,0.00021944896,0.0004000799,0.0007301908,0.00024164066,0.00059075875],"domain_scores_gemma":[0.9990233,0.000023041259,0.00019934717,0.00044347014,0.000084517844,0.00022633193],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00028133186,0.00039468924,0.00038564426,0.00017400247,0.00011467093,0.0000487673,0.0002636554,0.0004498308,0.00006912864],"category_scores_gemma":[0.00014920879,0.00040095492,0.000114504124,0.0003263343,0.0001255449,0.00001525552,0.00012327741,0.00029916715,0.000025958194],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000095976684,0.00034514,0.1906084,0.000041659532,0.000037982893,0.00002695775,0.0001521852,0.000032185224,0.8077334,0.0000049665177,0.00066384656,0.000257314],"study_design_scores_gemma":[0.0015699263,0.00050054153,0.13689241,0.000066271,0.000025604624,0.000012424178,0.00026077442,0.00014211106,0.8594643,0.000055909415,0.0005136912,0.0004960598],"about_ca_topic_score_codex":0.000050256185,"about_ca_topic_score_gemma":0.00015149404,"teacher_disagreement_score":0.053715985,"about_ca_system_score_codex":0.000098072924,"about_ca_system_score_gemma":0.00013584293,"threshold_uncertainty_score":0.99984425},"labels":[],"label_agreement":null},{"id":"W2153708939","doi":"10.1128/ec.3.6.1423-1432.2004","title":"<i>KRE5</i>Gene Null Mutant Strains of<i>Candida albicans</i>Are Avirulent and Have Altered Cell Wall Composition and Hypha Formation Properties","year":2004,"lang":"en","type":"article","venue":"Eukaryotic Cell","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":83,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"National Institute of Allergy and Infectious Diseases; National Institute of General Medical Sciences; National Institutes of Health","keywords":"Candida albicans; Biology; Saccharomyces cerevisiae; Mutant; Biochemistry; Corpus albicans; Cell wall; Spheroplast; Glucan; Molecular biology; Endoplasmic reticulum; Gene; Microbiology; Escherichia coli","score_opus":0.017677399839176,"score_gpt":0.22451350888350155,"score_spread":0.20683610904432556,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2153708939","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9954709,0.0015456522,0.0006278489,0.00042799473,0.000059211405,0.0006277745,0.000045893517,0.00003351306,0.0011612105],"genre_scores_gemma":[0.9980049,0.000500116,0.00070322596,0.00032651355,0.000053920452,0.000008436534,0.00006050281,0.000019980163,0.00032241154],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9986985,0.0000343613,0.00041106797,0.00030914284,0.0002872587,0.00025968472],"domain_scores_gemma":[0.9992824,0.000022481185,0.00016815768,0.00026105184,0.000104072846,0.00016182492],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00016623427,0.00020716377,0.0003794859,0.000068962974,0.00010529821,0.000026413174,0.00005689742,0.00008870556,0.000033368055],"category_scores_gemma":[0.0000115037465,0.00016825802,0.00007194243,0.00007266475,0.00019188816,0.00017305292,0.00003989055,0.00016206487,0.00000932578],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0007577375,0.00085894647,0.0642961,0.0020817427,0.000036961665,0.00005966714,0.0048150662,0.00006179202,0.9258868,0.00003085419,0.00011549944,0.0009987956],"study_design_scores_gemma":[0.004611948,0.0007654087,0.34358,0.00049668655,0.00022163922,0.00007701911,0.0017041152,0.000699229,0.6473084,0.00014271481,0.00009779191,0.00029501074],"about_ca_topic_score_codex":0.00020737246,"about_ca_topic_score_gemma":0.00015060598,"teacher_disagreement_score":0.2792839,"about_ca_system_score_codex":0.00010884471,"about_ca_system_score_gemma":0.000084269595,"threshold_uncertainty_score":0.68613625},"labels":[],"label_agreement":null},{"id":"W2154113980","doi":"10.1128/ec.3.5.1169-1175.2004","title":"Gene Replacement of Fructose-1,6-Bisphosphate Aldolase Supports the Hypothesis of a Single Photosynthetic Ancestor of Chromalveolates","year":2004,"lang":"en","type":"article","venue":"Eukaryotic Cell","topic":"Protist diversity and phylogeny","field":"Biochemistry, Genetics and Molecular Biology","cited_by":140,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia; Canadian Institute for Advanced Research","funders":"Canadian Institutes of Health Research; Genome Atlantic","keywords":"Plastid; Endosymbiosis; Biology; Fructose-bisphosphate aldolase; Aldolase A; Algae; Eukaryote; Red algae; Photosynthesis; Genetics; Gene; Botany; Chloroplast; Enzyme; Biochemistry; Genome","score_opus":0.011099818214709962,"score_gpt":0.19481260106617207,"score_spread":0.18371278285146211,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2154113980","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9975306,0.001143987,0.00013586825,0.000039278784,0.00009831599,0.0002539403,0.00007221353,0.0000037881089,0.00072204805],"genre_scores_gemma":[0.9979375,0.0001495552,0.0015970935,0.00005771273,0.00002258514,0.0000031290078,0.000019655683,0.000012437359,0.0002003296],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99909914,0.000040879662,0.00029824642,0.00022638445,0.00015894491,0.00017641445],"domain_scores_gemma":[0.9991025,0.000028775274,0.00028153262,0.00046474664,0.00007346134,0.00004900606],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001787962,0.0001324884,0.00021625195,0.000029347773,0.000042081585,0.000003489814,0.00026432687,0.00007987953,0.000105501],"category_scores_gemma":[0.00004255471,0.00010930761,0.0001505056,0.000092184506,0.00021658075,0.000003500166,0.000116268486,0.00004355571,0.0000048282955],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00023112213,0.00044364086,0.026066959,0.00014304448,0.00007707311,0.000005058916,0.0002504311,0.00024962428,0.9720804,0.000013124203,0.000113194415,0.0003263066],"study_design_scores_gemma":[0.00066643185,0.00087488303,0.022571003,0.0000339311,0.00006957886,0.0000089268315,0.000073443596,0.000004554704,0.9753186,0.00016284558,0.00010763762,0.00010817922],"about_ca_topic_score_codex":0.00013885603,"about_ca_topic_score_gemma":0.000012498434,"teacher_disagreement_score":0.0034959556,"about_ca_system_score_codex":0.000015347809,"about_ca_system_score_gemma":0.00009331321,"threshold_uncertainty_score":0.4457435},"labels":[],"label_agreement":null},{"id":"W2155458286","doi":"10.1128/ec.2.6.1350-1360.2003","title":"<i>MFα1</i> , the Gene Encoding the α Mating Pheromone of <i>Candida albicans</i>","year":2003,"lang":"en","type":"article","venue":"Eukaryotic Cell","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":70,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Biotechnology Research Institute","funders":"National Institute of Allergy and Infectious Diseases","keywords":"Biology; Candida albicans; Mating; Gene; Genetics; Pheromone; Encoding (memory); Fungal protein; Saccharomyces cerevisiae; Neuroscience","score_opus":0.013866452977527885,"score_gpt":0.2365875376361326,"score_spread":0.2227210846586047,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2155458286","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9030044,0.0014879754,0.0004988626,0.0006041907,0.0001531638,0.0003597223,0.0000047330705,0.000023735767,0.09386321],"genre_scores_gemma":[0.9937642,0.00012784234,0.0007208789,0.0009213936,0.00008721401,0.000007951324,0.000003643809,0.000019050198,0.0043477863],"study_design_codex":"observational","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.998669,0.000101275094,0.00035797112,0.00022499955,0.00035461306,0.00029210304],"domain_scores_gemma":[0.9987272,0.0003522368,0.00013784757,0.00063421094,0.00007302688,0.00007545246],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00079364114,0.00014744714,0.0002712022,0.000018365588,0.00019433384,0.000015688187,0.00017579642,0.000053294134,0.0005202779],"category_scores_gemma":[0.00021216655,0.0000781107,0.00014911918,0.00025426986,0.00021056691,0.000039205243,0.00003337695,0.0002614539,0.00004429751],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002027524,0.0005468856,0.7314286,0.00048446306,0.00011921879,0.00005902304,0.002935308,0.00007141044,0.2521566,0.0021940486,0.00739712,0.0024045638],"study_design_scores_gemma":[0.0028198306,0.0005034409,0.42162812,0.00030311267,0.000535008,0.00011440188,0.0062134787,0.00035759134,0.56037134,0.00097023963,0.0057244063,0.0004590718],"about_ca_topic_score_codex":0.00008989955,"about_ca_topic_score_gemma":0.000038612612,"teacher_disagreement_score":0.3098005,"about_ca_system_score_codex":0.000041048545,"about_ca_system_score_gemma":0.00012735453,"threshold_uncertainty_score":0.5696678},"labels":[],"label_agreement":null},{"id":"W2156315763","doi":"10.1128/ec.1.3.341-352.2002","title":"Random Sequencing of <i>Paramecium</i> Somatic DNA","year":2002,"lang":"en","type":"article","venue":"Eukaryotic Cell","topic":"Protist diversity and phylogeny","field":"Biochemistry, Genetics and Molecular Biology","cited_by":39,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"York University","funders":"","keywords":"Biology; Genome; ORFS; Genetics; Paramecium; Gene; Computational biology; Open reading frame; Peptide sequence","score_opus":0.014433537566678837,"score_gpt":0.1897226267318915,"score_spread":0.17528908916521266,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2156315763","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97550344,0.0010193032,0.00087434665,0.00003825067,0.00013006247,0.00016421021,0.00001533567,0.000009935963,0.02224512],"genre_scores_gemma":[0.996509,0.00010576249,0.0007874853,0.00017742455,0.00007859338,0.0000030845638,0.000021909522,0.000009729949,0.0023070034],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99932545,0.000047353376,0.00016098129,0.00018460405,0.000106490836,0.00017513205],"domain_scores_gemma":[0.99953413,0.00001937187,0.00007713806,0.00027669524,0.0000320124,0.000060629212],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000099076766,0.00010476373,0.00014723427,0.000024791583,0.000051532257,0.000008023267,0.000186966,0.000086833614,0.00028421282],"category_scores_gemma":[0.000031923253,0.000105797,0.000100880694,0.00006466858,0.000062852174,0.0000026813238,0.00007963916,0.000059372673,0.00010970169],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000106626285,0.0002554945,0.07879853,0.00025698595,0.00008428227,0.000028869717,0.00044895345,0.0003791953,0.9069349,0.000059283702,0.011808863,0.0008380223],"study_design_scores_gemma":[0.0020552492,0.0002323441,0.008851748,0.000023947043,0.000054046646,0.000020947558,0.00008883575,0.00065793836,0.98678917,0.00016156443,0.0008212839,0.00024294047],"about_ca_topic_score_codex":0.00001448949,"about_ca_topic_score_gemma":0.0000032566722,"teacher_disagreement_score":0.079854265,"about_ca_system_score_codex":0.000011326196,"about_ca_system_score_gemma":0.000020767986,"threshold_uncertainty_score":0.43142766},"labels":[],"label_agreement":null},{"id":"W2156439732","doi":"10.1128/ec.4.1.134-146.2005","title":"Novel Interaction between Apc5p and Rsp5p in an Intracellular Signaling Pathway in <i>Saccharomyces cerevisiae</i>","year":2005,"lang":"en","type":"article","venue":"Eukaryotic Cell","topic":"Ubiquitin and proteasome pathways","field":"Biochemistry, Genetics and Molecular Biology","cited_by":20,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan; Royal University Hospital","funders":"","keywords":"Chromatin; Biology; Saccharomyces cerevisiae; Cell biology; Mutant; Ubiquitin; Chromatin remodeling; Protein subunit; Mutation; Genetics; DNA; Gene","score_opus":0.018321854780458252,"score_gpt":0.24475278457932423,"score_spread":0.22643092979886598,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2156439732","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99647367,0.0012314612,0.0006222546,0.00012437519,0.000059093865,0.00024435017,0.000014350408,0.0000132252835,0.0012172258],"genre_scores_gemma":[0.9969301,0.00008066371,0.002103855,0.00014878246,0.00041048773,0.000016275015,0.00011765907,0.000026096057,0.0001660604],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.998787,0.00008021139,0.00032120166,0.00042324973,0.00010052577,0.0002878052],"domain_scores_gemma":[0.99953383,0.000029942328,0.0000864987,0.00022261661,0.000023621105,0.000103476996],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00035052918,0.00018748389,0.00019853174,0.00009530866,0.000038028407,0.000044260276,0.00014922082,0.0001599288,0.000055763463],"category_scores_gemma":[0.000024613875,0.00019669949,0.00003995218,0.00010936647,0.00003562263,0.000023837052,0.0000867352,0.00022224194,0.000018018081],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000040290513,0.00017438074,0.07028559,0.000054005908,0.0000058599417,0.0000073998685,0.00027720229,0.00025503148,0.91323006,0.000019528283,0.000019275614,0.015631394],"study_design_scores_gemma":[0.0010185081,0.00022910624,0.011648327,0.00006245442,0.0000070456654,0.000012989827,0.0002359028,0.00043057412,0.9820065,0.00003717865,0.004016389,0.0002950336],"about_ca_topic_score_codex":0.00005160216,"about_ca_topic_score_gemma":0.00014702429,"teacher_disagreement_score":0.06877644,"about_ca_system_score_codex":0.000029706645,"about_ca_system_score_gemma":0.00004053756,"threshold_uncertainty_score":0.8021172},"labels":[],"label_agreement":null},{"id":"W2157136093","doi":"10.1128/ec.00128-12","title":"Peroxisomal and Mitochondrial β-Oxidation Pathways Influence the Virulence of the Pathogenic Fungus Cryptococcus neoformans","year":2012,"lang":"en","type":"article","venue":"Eukaryotic Cell","topic":"Fungal Infections and Studies","field":"Medicine","cited_by":65,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canada's Michael Smith Genome Sciences Centre; University of British Columbia","funders":"Canadian Institutes of Health Research; University of British Columbia; Burroughs Wellcome Fund","keywords":"Cryptococcus neoformans; Biology; Virulence; Virulence factor; Peroxisome; Microbiology; Cryptococcosis; Cryptococcus; Fungal protein; Pathogenic fungus; Fungus; Appressorium; Cell biology; Mutant; Biochemistry; Gene; Hypha","score_opus":0.012034218937084422,"score_gpt":0.22181822842975263,"score_spread":0.2097840094926682,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2157136093","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9941484,0.0012755351,0.00007195583,0.00018617975,0.000479421,0.0004740439,0.0000060769803,0.000018897405,0.0033395004],"genre_scores_gemma":[0.9989056,0.00014023964,0.00014988311,0.0001882826,0.0002574625,0.000027711385,0.000001906779,0.000008984054,0.00031993666],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9991938,0.000051704163,0.00021323969,0.00011801168,0.00018919168,0.00023409486],"domain_scores_gemma":[0.999351,0.000114087416,0.000094524825,0.00030571467,0.00007125318,0.00006337201],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015712231,0.00011681593,0.00015230814,0.000028247376,0.0002510061,0.0000118849875,0.00008871987,0.000051566596,0.000055882963],"category_scores_gemma":[0.00009790962,0.00006157475,0.00008468622,0.00016521962,0.00018345409,0.00012326676,0.00010690439,0.00017433135,0.000030001023],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007782633,0.0002515015,0.7638256,0.00013647108,0.00003998856,0.0000018035869,0.0035097129,0.000036445213,0.22916025,0.0007170123,0.00081465824,0.0014287134],"study_design_scores_gemma":[0.0004982283,0.00016222642,0.979815,0.0000434486,0.000110578505,0.00003490319,0.00041789998,0.00009054204,0.018023489,0.00004787813,0.0006780992,0.00007770709],"about_ca_topic_score_codex":0.000048843878,"about_ca_topic_score_gemma":0.000010952922,"teacher_disagreement_score":0.21598938,"about_ca_system_score_codex":0.000026548923,"about_ca_system_score_gemma":0.000041120555,"threshold_uncertainty_score":0.25109452},"labels":[],"label_agreement":null},{"id":"W2157149808","doi":"10.1128/ec.00070-08","title":"Genomewide Location Analysis of <i>Candida albicans</i> Upc2p, a Regulator of Sterol Metabolism and Azole Drug Resistance","year":2008,"lang":"en","type":"article","venue":"Eukaryotic Cell","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":118,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Montreal Clinical Research Institute; Université de Montréal; Institute for Research in Immunology and Cancer","funders":"Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research","keywords":"Biology; Gene; Promoter; Candida albicans; Repressor; Transcription factor; Genetics; Biochemistry; Gene expression","score_opus":0.009105583424874336,"score_gpt":0.22248342958026796,"score_spread":0.21337784615539362,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2157149808","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99068403,0.0054457877,0.00050647196,0.00014780078,0.00003769346,0.00023989461,0.000024716232,0.000015987038,0.0028976146],"genre_scores_gemma":[0.9890888,0.00044874946,0.0010821145,0.00013166487,0.000029706804,0.0000046022474,0.000032648844,0.000014195175,0.0091675315],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99852324,0.000046867146,0.0005323356,0.00032580533,0.00037519872,0.0001965419],"domain_scores_gemma":[0.9987183,0.000102062455,0.000245905,0.0005667289,0.00023578048,0.00013120956],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00027960152,0.0001507755,0.00072325766,0.00021569728,0.000058970287,0.0000036697134,0.00009202922,0.00006100432,0.00013701846],"category_scores_gemma":[0.000054692762,0.00013381304,0.0001709913,0.0009117353,0.00028196909,0.000071034476,0.000031420448,0.0001052415,0.000004078524],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0008325647,0.00041295445,0.9674717,0.0008990447,0.00061910547,0.000024020288,0.0020649612,0.000070110575,0.025677254,0.00018242671,0.0014665999,0.0002792417],"study_design_scores_gemma":[0.00087412755,0.00003198421,0.9793179,0.000060095623,0.0014161173,0.0000022674965,0.00020490377,0.0002306873,0.01719035,0.00003695252,0.0005257508,0.00010885028],"about_ca_topic_score_codex":0.00018419379,"about_ca_topic_score_gemma":0.00037183988,"teacher_disagreement_score":0.011846198,"about_ca_system_score_codex":0.00003918848,"about_ca_system_score_gemma":0.00014886649,"threshold_uncertainty_score":0.5456737},"labels":[],"label_agreement":null},{"id":"W2157949716","doi":"10.1128/ec.5.3.568-578.2006","title":"Mutational Analysis of the <i>Saccharomyces cerevisiae</i> Cytochrome <i>c</i> Oxidase Assembly Protein Cox11p","year":2006,"lang":"en","type":"article","venue":"Eukaryotic Cell","topic":"Photosynthetic Processes and Mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":51,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"Canadian Institutes of Health Research","keywords":"Cytochrome c oxidase; Biology; Intermembrane space; Mutant; Inner mitochondrial membrane; Cytochrome c; Electron Transport Complex IV; Protein subunit; Saccharomyces cerevisiae; Cytochrome b; Biochemistry; Cytochrome; Oxidase test; Genetics; Mitochondrion; Bacterial outer membrane; Gene; Enzyme; Mitochondrial DNA","score_opus":0.0034184073140394087,"score_gpt":0.19526187026877784,"score_spread":0.19184346295473842,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2157949716","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99242234,0.00031401546,0.0025367774,0.000110812696,0.000058385416,0.0003079565,0.00008725522,0.0000110112,0.004151452],"genre_scores_gemma":[0.9971213,0.000012812051,0.00041531754,0.0001797427,0.0000843757,0.000033811775,0.00014030056,0.000018169521,0.001994203],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.998823,0.000053662316,0.00030556013,0.00032808862,0.00026231844,0.0002273652],"domain_scores_gemma":[0.9991847,0.000017283346,0.00021365925,0.00042936674,0.00010409494,0.00005085208],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00016021554,0.00017090433,0.00023349102,0.00006126326,0.00008470039,0.000021678212,0.0003405006,0.00009752091,0.000091732276],"category_scores_gemma":[0.000028263401,0.00012869854,0.00027648683,0.00044893858,0.000073347146,0.000004831342,0.00011777433,0.00007161965,0.0000087000335],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000020164991,0.0001671811,0.00078066805,0.00004903913,0.00010878791,0.0000024561177,0.000011229204,0.00046232837,0.9977796,0.00032107852,0.00024395107,0.00005350758],"study_design_scores_gemma":[0.00032513373,0.00007893908,0.00834428,0.000017725715,0.00033315958,0.000007109174,0.000025492893,0.00029082215,0.9891677,0.00031953014,0.00092533795,0.00016477503],"about_ca_topic_score_codex":0.00009357786,"about_ca_topic_score_gemma":0.000053845528,"teacher_disagreement_score":0.008611913,"about_ca_system_score_codex":0.000012469404,"about_ca_system_score_gemma":0.00012259136,"threshold_uncertainty_score":0.5248174},"labels":[],"label_agreement":null},{"id":"W2158275075","doi":"10.1128/ec.00249-08","title":"KMP-11, a Basal Body and Flagellar Protein, Is Required for Cell Division in <i>Trypanosoma brucei</i>","year":2008,"lang":"en","type":"article","venue":"Eukaryotic Cell","topic":"Trypanosoma species research and implications","field":"Medicine","cited_by":50,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institutes of Health; University of California, San Francisco; University of Oxford; York University; National Institute of Allergy and Infectious Diseases; Johns Hopkins University","keywords":"Flagellum; Cytokinesis; Biology; Trypanosoma brucei; Cell biology; Cell division; Basal body; Microtubule; Kinetoplast; Gene silencing; Cell; Genetics; DNA; Gene","score_opus":0.023033823665921712,"score_gpt":0.26992600027251945,"score_spread":0.24689217660659774,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2158275075","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9860442,0.0007508585,0.0007097464,0.0025033522,0.00006059934,0.0022842805,0.000059266426,0.000068667934,0.00751901],"genre_scores_gemma":[0.9804556,0.00022745346,0.0028536562,0.0008031486,0.00015806455,0.00017286705,0.0000656609,0.000054570093,0.015208974],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9978983,0.000051946652,0.00042870658,0.00055627304,0.0004278093,0.0006369565],"domain_scores_gemma":[0.99863744,0.0001519015,0.00008723464,0.0005934508,0.00013537968,0.00039461761],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000040410727,0.00024697938,0.00038959147,0.00021661795,0.0002204792,0.0000387618,0.000177989,0.00015774318,0.0002186672],"category_scores_gemma":[0.00014544386,0.00022639032,0.00012554468,0.00039120123,0.00018242591,0.0001499094,0.00013259944,0.00023698447,0.0001156305],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002494781,0.0008634136,0.030327067,0.00045955804,0.000012677067,0.00013921023,0.00043584715,0.0000010075012,0.9230474,0.00006467469,0.044074345,0.00032531098],"study_design_scores_gemma":[0.0057724463,0.0010071918,0.6683517,0.00012105815,0.000029769419,0.00006807812,0.00011512904,0.00072437,0.30311644,0.00023572773,0.020147514,0.00031059186],"about_ca_topic_score_codex":0.000072958734,"about_ca_topic_score_gemma":0.000013506797,"teacher_disagreement_score":0.6380246,"about_ca_system_score_codex":0.00009357416,"about_ca_system_score_gemma":0.00024782962,"threshold_uncertainty_score":0.9231929},"labels":[],"label_agreement":null},{"id":"W2158372574","doi":"10.1128/ec.2.6.1336-1349.2003","title":"<i>Cryptococcus neoformans</i> Gene Expression during Experimental Cryptococcal Meningitis","year":2003,"lang":"en","type":"article","venue":"Eukaryotic Cell","topic":"Fungal Infections and Studies","field":"Medicine","cited_by":126,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"BC Cancer Agency; University of British Columbia","funders":"National Institute of Allergy and Infectious Diseases; Canadian Institutes of Health Research; Michael Smith Health Research BC; University of Oklahoma; Burroughs Wellcome Fund","keywords":"Cryptococcus neoformans; Biology; Gene; Gene expression; Transcriptome; Cryptococcosis; Fungus; Adaptation (eye); Gene expression profiling; Microbiology; Genetics; Botany","score_opus":0.011248746494356187,"score_gpt":0.2423360033076038,"score_spread":0.2310872568132476,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2158372574","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.92086643,0.0011369581,0.00030340103,0.000037140417,0.00043309893,0.0004953541,0.0000032987382,0.00011887382,0.07660546],"genre_scores_gemma":[0.9925258,0.000061397026,0.0033833939,0.000094085735,0.00016760037,0.00010158065,0.000009156784,0.000032628894,0.0036243328],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9987828,0.000036677397,0.00027137788,0.00030268857,0.00021333239,0.0003930983],"domain_scores_gemma":[0.9994084,0.000030564865,0.000055638255,0.000284039,0.000044039538,0.00017726698],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00009066186,0.00021428551,0.0002783516,0.00008799236,0.00032586668,0.000025609117,0.00005144525,0.00007874888,0.0011640828],"category_scores_gemma":[0.000023895149,0.00018300899,0.00013711936,0.00015261745,0.00006284283,0.00010253424,0.00005864779,0.00019891938,0.00023840101],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008828816,0.00058269093,0.06152081,0.00009074791,0.000033079432,0.00014535761,0.0006497086,0.00004051547,0.93297064,0.00013147289,0.0036942079,0.000052501797],"study_design_scores_gemma":[0.0021384563,0.0003174416,0.041685972,0.00006560711,0.000035905283,0.00017659848,0.0004466629,0.000025843863,0.9521683,0.000018857878,0.0027129976,0.00020739764],"about_ca_topic_score_codex":0.00001274302,"about_ca_topic_score_gemma":8.1056504e-7,"teacher_disagreement_score":0.072981134,"about_ca_system_score_codex":0.00011159406,"about_ca_system_score_gemma":0.00003847106,"threshold_uncertainty_score":0.999749},"labels":[],"label_agreement":null},{"id":"W2158592372","doi":"10.1128/ec.00325-09","title":"Role of Transcription Factor CaNdt80p in Cell Separation, Hyphal Growth, and Virulence in Candida albicans","year":2010,"lang":"en","type":"article","venue":"Eukaryotic Cell","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":79,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Université de Montréal; Biotechnology Research Institute","funders":"Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research","keywords":"Biology; Candida albicans; Transcription factor; Gene; Cell biology; Regulator; Saccharomyces cerevisiae; Fungal protein; Genetics","score_opus":0.006868243709482025,"score_gpt":0.24415635826335044,"score_spread":0.23728811455386842,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2158592372","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9934524,0.00035972064,0.00003577697,0.00009375987,0.000078775585,0.0002825187,0.000017887322,0.000009933726,0.005669173],"genre_scores_gemma":[0.9991343,0.00012483145,0.0001653716,0.000058820508,0.00003175781,0.000006012057,0.000012222882,0.000009902921,0.0004567814],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99900925,0.000035395555,0.00031529122,0.00025732437,0.00017890928,0.00020380624],"domain_scores_gemma":[0.99956065,0.00005797426,0.000054746844,0.00018359837,0.000042246058,0.000100787285],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014586507,0.00012019303,0.00026385544,0.000105296815,0.000022195429,0.000007115426,0.000059602422,0.00010702068,0.00021635104],"category_scores_gemma":[0.000041928804,0.00011059526,0.000041758372,0.0001812926,0.000099801095,0.000102199934,0.000009772355,0.00029585292,0.0000063670864],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011114093,0.00015876845,0.57949626,0.00012618369,0.0000013413197,0.000007673907,0.0011315556,0.0000014790212,0.4187058,0.000027439457,0.000012245635,0.00022010977],"study_design_scores_gemma":[0.0011709577,0.00011801633,0.8857716,0.00003705251,0.00001426733,0.0000029837242,0.00042286373,0.00023794398,0.11197688,0.00012064844,0.000035309706,0.000091509646],"about_ca_topic_score_codex":0.003387262,"about_ca_topic_score_gemma":0.01985659,"teacher_disagreement_score":0.30672893,"about_ca_system_score_codex":0.00003515295,"about_ca_system_score_gemma":0.00014553938,"threshold_uncertainty_score":0.99802846},"labels":[],"label_agreement":null},{"id":"W2159072518","doi":"10.1128/ec.00281-06","title":"MpkA-Dependent and -Independent Cell Wall Integrity Signaling in <i>Aspergillus nidulans</i>","year":2007,"lang":"en","type":"article","venue":"Eukaryotic Cell","topic":"Fungal and yeast genetics research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":165,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Bio-oriented Technology Research Advancement Institution; University of Toronto; Universität Wien; Ministry of Education, Culture, Sports, Science and Technology","keywords":"Aspergillus nidulans; Biology; Transcription factor; Transcription (linguistics); Promoter; Mutant; Saccharomyces cerevisiae; Cell biology; Gene; Response element; Molecular biology; Gene expression; Biochemistry","score_opus":0.010902859246365179,"score_gpt":0.24666060246551805,"score_spread":0.23575774321915288,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2159072518","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9852611,0.0020838787,0.000649511,0.00007161329,0.0001716638,0.00024597216,0.000010726094,0.000012320292,0.011493235],"genre_scores_gemma":[0.9949471,0.00034515467,0.0006979401,0.00021708933,0.00016902896,0.000006255699,0.000048380276,0.000032528642,0.003536557],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9980674,0.00007990163,0.0003390565,0.0005593735,0.00036089306,0.0005933695],"domain_scores_gemma":[0.9992443,0.00004257439,0.00005951828,0.00033486457,0.0000769117,0.00024184534],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008145383,0.00023379666,0.0001980804,0.000113835194,0.000073936164,0.000042685795,0.00027984314,0.00023994596,0.00007769993],"category_scores_gemma":[0.000029880131,0.00022071978,0.00007529274,0.00014333082,0.00007496844,0.00000452698,0.00028228358,0.00043177715,0.00005212758],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00020613412,0.00030091396,0.07386707,0.00008612564,0.000012394339,0.00011775209,0.00012951781,0.00032079994,0.9233236,0.000015175406,0.00022388448,0.0013966926],"study_design_scores_gemma":[0.0012687672,0.0003388219,0.036106,0.000019538742,0.000011968643,0.000027000044,0.0002800826,0.00023036837,0.96017903,0.0000964142,0.0011076911,0.0003343135],"about_ca_topic_score_codex":0.00018508897,"about_ca_topic_score_gemma":0.0003175399,"teacher_disagreement_score":0.037761062,"about_ca_system_score_codex":0.000047767517,"about_ca_system_score_gemma":0.00008907811,"threshold_uncertainty_score":0.9000691},"labels":[],"label_agreement":null},{"id":"W2159394744","doi":"10.1128/ec.5.5.789-793.2006","title":"Evidence of mRNA-Mediated Intron Loss in the Human-Pathogenic Fungus <i>Cryptococcus neoformans</i>","year":2006,"lang":"en","type":"article","venue":"Eukaryotic Cell","topic":"Fungal Infections and Studies","field":"Medicine","cited_by":54,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institute of Neurological Disorders and Stroke; Genome Canada; Canada's Michael Smith Genome Sciences Centre; Broad Institute; National Institutes of Health; National Science Foundation","keywords":"Cryptococcus neoformans; Biology; Intron; Fungus; Pathogenic fungus; Cryptococcus; Genetics; Messenger RNA; Microbiology; Gene; Botany","score_opus":0.020276022379580934,"score_gpt":0.26655464782873906,"score_spread":0.24627862544915813,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2159394744","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9755372,0.0041886573,0.000035013403,0.00039733533,0.00014094399,0.00050943217,0.000004436309,0.00003181224,0.019155184],"genre_scores_gemma":[0.9982764,0.00025821055,0.00006528091,0.00023500311,0.00020072091,0.000036723053,0.000016402902,0.000013002277,0.00089825783],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9987863,0.000068104375,0.00041224837,0.00018702638,0.0002581303,0.00028820944],"domain_scores_gemma":[0.99918187,0.0002646654,0.000105266176,0.00033605704,0.00007683278,0.00003530688],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00039495566,0.00015280698,0.000292533,0.000115448194,0.00010240785,0.000011372521,0.00013067458,0.000065310756,0.0001536493],"category_scores_gemma":[0.000059801005,0.000102692895,0.000115167684,0.00042154524,0.00012344892,0.00007380548,0.00004760672,0.0002605275,0.00009135743],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009951425,0.0008042637,0.9501409,0.0003850802,0.00002690653,0.00016448376,0.0007675145,0.00015649127,0.035766162,0.00038338892,0.010971787,0.00033348563],"study_design_scores_gemma":[0.0011826516,0.00056605495,0.9926518,0.00024309561,0.00010087187,0.000042121923,0.00024543042,0.00011472836,0.0036138296,0.00017320218,0.00093154825,0.00013465309],"about_ca_topic_score_codex":0.0005393119,"about_ca_topic_score_gemma":0.00023032409,"teacher_disagreement_score":0.04251089,"about_ca_system_score_codex":0.000062459614,"about_ca_system_score_gemma":0.000047502086,"threshold_uncertainty_score":0.41876948},"labels":[],"label_agreement":null},{"id":"W2160067598","doi":"10.1128/ec.00141-10","title":"Ras Proteins Have Multiple Functions in Vegetative Cells of Dictyostelium","year":2010,"lang":"en","type":"article","venue":"Eukaryotic Cell","topic":"Cellular Mechanics and Interactions","field":"Biochemistry, Genetics and Molecular Biology","cited_by":16,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"Chemotaxis; Biology; Dictyostelium; Dictyostelium discoideum; Cell biology; Motility; Cytokinesis; Cell; Receptor; Cell division; Genetics; Gene","score_opus":0.005617722238553078,"score_gpt":0.21221377199334335,"score_spread":0.20659604975479026,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2160067598","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9869132,0.00011843265,0.0033567077,0.00004660875,0.0007193164,0.00034312272,0.000033877608,0.0000074650693,0.008461261],"genre_scores_gemma":[0.9947645,0.000021271471,0.0008836692,0.000044587898,0.00012185191,0.000031044732,0.000093052404,0.000021294085,0.0040187286],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9991694,0.000035487865,0.00024357432,0.0002654825,0.000095669704,0.000190376],"domain_scores_gemma":[0.99938494,0.000026165288,0.00009810948,0.0003419579,0.00008139799,0.00006743621],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012085972,0.0001289038,0.00013500391,0.000075866126,0.000045508456,0.000010495214,0.0001344711,0.00012717016,0.00016483656],"category_scores_gemma":[0.00006278731,0.00012876549,0.000103440165,0.0000858095,0.000049122355,0.0000050209314,0.000081210506,0.00023968972,0.000044128592],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000033158572,0.00028548486,0.0072116223,0.000020640633,0.0000128181255,0.0000030393091,0.00010310256,0.00008036654,0.99145204,0.0000390464,0.00052701787,0.0002316679],"study_design_scores_gemma":[0.0006236464,0.00022702084,0.006714872,0.0000118230855,0.000013622126,0.0000046869354,0.00029876732,0.0010201854,0.98498124,0.000043702097,0.005914611,0.00014580268],"about_ca_topic_score_codex":0.00014196093,"about_ca_topic_score_gemma":0.001129046,"teacher_disagreement_score":0.007851291,"about_ca_system_score_codex":0.000009182971,"about_ca_system_score_gemma":0.00006617158,"threshold_uncertainty_score":0.5250904},"labels":[],"label_agreement":null},{"id":"W2160293546","doi":"10.1128/ec.00158-13","title":"Evolution of the Cytosolic Iron-Sulfur Cluster Assembly Machinery in Blastocystis Species and Other Microbial Eukaryotes","year":2013,"lang":"en","type":"article","venue":"Eukaryotic Cell","topic":"Protist diversity and phylogeny","field":"Biochemistry, Genetics and Molecular Biology","cited_by":57,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University","funders":"Canadian Institutes of Health Research","keywords":"Biology; Cytosol; Blastocystis; Sulfur; Iron–sulfur cluster; Cluster (spacecraft); Cell biology; Biochemistry; Genetics; Evolutionary biology; Microbiology; Enzyme; Chemistry","score_opus":0.0053684843829156816,"score_gpt":0.18044493068478507,"score_spread":0.1750764463018694,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2160293546","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9956994,0.00043047138,0.00017802702,0.00014059785,0.0001287559,0.00030654823,0.000030531235,0.000003993211,0.003081686],"genre_scores_gemma":[0.9974478,0.000019703626,0.00018295986,0.0002549297,0.0001094938,0.0000059081713,0.00000810806,0.000011277095,0.0019598606],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99928665,0.00008330768,0.00015425048,0.000212594,0.00008120006,0.00018200597],"domain_scores_gemma":[0.99960774,0.000017194878,0.00007391411,0.00023672421,0.00002628282,0.000038120696],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00008780814,0.00012359067,0.00012170052,0.000036493024,0.00005543086,0.0000167406,0.00019553705,0.000109958186,0.00007402162],"category_scores_gemma":[0.000021306245,0.00009917102,0.000063341424,0.00007716231,0.00013774786,0.000006295115,0.00024004965,0.00009436013,0.000027398077],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000028624088,0.000059622074,0.57086015,0.00003962629,0.000007745699,5.545611e-7,0.00008509392,0.000100054094,0.42675713,0.00003416868,0.0019572598,0.00006998777],"study_design_scores_gemma":[0.00058215024,0.000078691126,0.87718064,0.000018032713,0.000012322227,0.000009761938,0.00005578641,0.00010306098,0.12137733,0.00008182033,0.00037561017,0.00012477666],"about_ca_topic_score_codex":0.0005705076,"about_ca_topic_score_gemma":0.00024455885,"teacher_disagreement_score":0.30632052,"about_ca_system_score_codex":0.00002157705,"about_ca_system_score_gemma":0.00003874162,"threshold_uncertainty_score":0.40440768},"labels":[],"label_agreement":null},{"id":"W2160666805","doi":"10.1128/ec.00013-14","title":"The Path to Triacylglyceride Obesity in the <i>sta6</i> Strain of Chlamydomonas reinhardtii","year":2014,"lang":"en","type":"article","venue":"Eukaryotic Cell","topic":"Algal biology and biofuel production","field":"Energy","cited_by":165,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"National Institute of Environmental Health Sciences; National Institute of General Medical Sciences; Office of Science; National Institutes of Health; University of Texas Southwestern Medical Center; Korea Carbon Capture and Sequestration R and D Center; U.S. Department of Energy","keywords":"Biology; Chlamydomonas reinhardtii; Biochemistry; Chlamydomonas; Transcriptome; Gene; Glyoxylate cycle; Gene expression; Enzyme; Mutant","score_opus":0.009259885979347916,"score_gpt":0.21343797996981564,"score_spread":0.20417809399046774,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2160666805","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.95838857,0.00022449471,0.00014185935,0.0026529245,0.0005414426,0.00032580225,0.000007960042,0.000031495594,0.037685435],"genre_scores_gemma":[0.9971768,0.00003887687,0.00010819764,0.00061586825,0.00029304085,0.000012940387,0.000014748971,0.00000906502,0.001730423],"study_design_codex":"design_other","study_design_gemma":"observational","domain_scores_codex":[0.99861723,0.00042407284,0.00029480096,0.00024034533,0.00016268122,0.00026084014],"domain_scores_gemma":[0.99900573,0.00034178773,0.00009623772,0.00048407644,0.00003474611,0.000037418074],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0015516476,0.00012697319,0.00016930698,0.00003068714,0.0001491147,0.000016722137,0.00038658964,0.00009141301,0.00007592935],"category_scores_gemma":[0.00023825128,0.000068848465,0.00007520581,0.0002295453,0.00011217983,0.00003834551,0.000058418882,0.00020684405,0.00014275622],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.005748998,0.0035137644,0.22260554,0.0007676928,0.00026039194,0.00010566886,0.015966581,0.004750446,0.21456107,0.20654158,0.07915998,0.24601826],"study_design_scores_gemma":[0.0025169188,0.0012033737,0.72740626,0.000061085724,0.00007889919,0.00002920612,0.0014673781,0.00035019923,0.09229047,0.01893292,0.15501793,0.00064539595],"about_ca_topic_score_codex":0.00046785438,"about_ca_topic_score_gemma":0.00046118695,"teacher_disagreement_score":0.5048007,"about_ca_system_score_codex":0.000023866845,"about_ca_system_score_gemma":0.000025293511,"threshold_uncertainty_score":0.28075588},"labels":[],"label_agreement":null},{"id":"W2161359562","doi":"10.1128/ec.00236-12","title":"Normal Adaptation of Candida albicans to the Murine Gastrointestinal Tract Requires Efg1p-Dependent Regulation of Metabolic and Host Defense Genes","year":2012,"lang":"en","type":"article","venue":"Eukaryotic Cell","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":85,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Biotechnology Research Institute","funders":"National Institute of Neurological Disorders and Stroke; National Institute of Allergy and Infectious Diseases; Canadian Institutes of Health Research","keywords":"Biology; Candida albicans; Microbiology; Cecum; Mutant; Corpus albicans; Gene expression; Gastrointestinal tract; Gene; Genetics; Biochemistry","score_opus":0.01966054700669537,"score_gpt":0.250923265812894,"score_spread":0.2312627188061986,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2161359562","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9946848,0.0018357763,0.0017840406,0.00019511813,0.000057246143,0.000307584,0.000015514432,0.000008467675,0.001111439],"genre_scores_gemma":[0.9967955,0.000052367723,0.0018965342,0.000043517633,0.000119850425,0.000004518895,0.000011346027,0.0000100158895,0.0010664013],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9990009,0.00004769696,0.00031866654,0.00014183708,0.00028566382,0.00020523951],"domain_scores_gemma":[0.99924976,0.000111363355,0.00013830447,0.0002532872,0.00011854414,0.00012876837],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00042859215,0.00010793268,0.00024450183,0.00005822963,0.00004568171,0.0000045229144,0.00005336685,0.000026530133,0.00021009981],"category_scores_gemma":[0.00012956733,0.00007552436,0.00006209215,0.00012340897,0.000087018496,0.0000929782,0.000028794486,0.000081058446,0.000010221263],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00037829322,0.00023089541,0.96171564,0.00013959917,0.000010905263,0.0000028883435,0.00097225764,0.000121089215,0.034370508,0.0001513239,0.00006410246,0.0018425279],"study_design_scores_gemma":[0.00047905894,0.00026641347,0.9765207,0.00006659443,0.00013968296,0.00005293706,0.0008401887,0.00036146323,0.021097321,0.0000059451895,0.000108178596,0.000061517254],"about_ca_topic_score_codex":0.00072463055,"about_ca_topic_score_gemma":0.0004557727,"teacher_disagreement_score":0.014805088,"about_ca_system_score_codex":0.000017707076,"about_ca_system_score_gemma":0.0000664403,"threshold_uncertainty_score":0.30797938},"labels":[],"label_agreement":null},{"id":"W2161970873","doi":"10.1128/ec.00090-07","title":"Barrier Activity in <i>Candida albicans</i> Mediates Pheromone Degradation and Promotes Mating","year":2007,"lang":"en","type":"article","venue":"Eukaryotic Cell","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":40,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Canadian Institutes of Health Research; Rhode Island Foundation","keywords":"Candida albicans; Biology; Pheromone; Mating type; Cell biology; Mating; Saccharomyces cerevisiae; Mutant; Corpus albicans; Microbiology; Biochemistry; Yeast; Gene; Genetics","score_opus":0.011271801236115174,"score_gpt":0.25540425018147994,"score_spread":0.24413244894536476,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2161970873","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9917292,0.00037494703,0.0006214158,0.00020180197,0.000058053083,0.00032281622,0.0000035033117,0.000035153804,0.0066531384],"genre_scores_gemma":[0.99714446,0.00004882292,0.0012015565,0.0001245198,0.00006864494,0.0000037846532,0.000011640101,0.000015074281,0.0013815183],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9989176,0.000038203452,0.00024108261,0.0002819375,0.00022749319,0.00029373143],"domain_scores_gemma":[0.9993261,0.00022510612,0.00006867743,0.00019164948,0.00003687678,0.00015155078],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007093854,0.00013362055,0.0002493945,0.00006973334,0.000057273694,0.0000146757975,0.000041478375,0.000084538675,0.0001654102],"category_scores_gemma":[0.0001974791,0.000115675124,0.000038102382,0.00019216204,0.00009649544,0.00011960263,0.000027350652,0.00021509806,0.000014033492],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00018161097,0.0001813563,0.9122036,0.00019081158,0.000006851926,0.000054658343,0.0004200125,4.896304e-7,0.07630077,0.000011539329,0.000055845692,0.010392422],"study_design_scores_gemma":[0.0008497153,0.00011682737,0.9052411,0.000078951176,0.00002558507,0.000006523586,0.00032900812,0.00026014782,0.092868805,0.00009099267,0.000022873088,0.00010950128],"about_ca_topic_score_codex":0.00026862192,"about_ca_topic_score_gemma":0.0009542077,"teacher_disagreement_score":0.01656804,"about_ca_system_score_codex":0.000077512006,"about_ca_system_score_gemma":0.00006578283,"threshold_uncertainty_score":0.47170946},"labels":[],"label_agreement":null},{"id":"W2162320275","doi":"10.1128/ec.05027-11","title":"Genomic Characterization of Neoparamoeba pemaquidensis (Amoebozoa) and Its Kinetoplastid Endosymbiont","year":2011,"lang":"en","type":"article","venue":"Eukaryotic Cell","topic":"Insect symbiosis and bacterial influences","field":"Agricultural and Biological Sciences","cited_by":20,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University; University of Prince Edward Island; Canadian Institute for Advanced Research","funders":"Nova Scotia Health Research Foundation; Canadian Institutes of Health Research; Tula Foundation; Canadian Institute for Advanced Research","keywords":"Biology; Protist; Genome; Genetics; Evolutionary biology; Gene","score_opus":0.022534832309216917,"score_gpt":0.17719270712848392,"score_spread":0.15465787481926702,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2162320275","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9980072,0.00008406112,9.444119e-7,0.000059857506,0.0002399981,0.0001663608,0.000035430214,0.00002711555,0.0013790285],"genre_scores_gemma":[0.9993199,0.000106596315,0.000045955105,0.00010082931,0.00014007524,0.0000051191146,0.000042180935,0.0000012621109,0.00023804387],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9991557,0.00004619892,0.0002756745,0.0002275089,0.00010101976,0.00019391999],"domain_scores_gemma":[0.99961543,0.00004461022,0.00015915617,0.000045136738,0.0000623416,0.00007331835],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00010796707,0.00013313744,0.00020496473,0.000015268135,0.00008496573,0.000024545825,0.0001364107,0.000072507755,0.001105551],"category_scores_gemma":[0.000013401213,0.00005722484,0.000055598648,0.00011801848,0.000045594352,0.00012202626,0.00006402373,0.000051383056,0.000046823152],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000338028,0.00006946054,0.051040657,0.000014166461,0.000005055386,0.0000023235582,0.00016932692,8.523704e-8,0.94710374,0.000114670685,0.00001074119,0.0014359629],"study_design_scores_gemma":[0.000074575626,0.00019763218,0.68991333,0.000011802759,0.000012497651,0.000005089417,0.000030491765,0.000022530878,0.3094865,0.00003253935,0.00011527592,0.00009774242],"about_ca_topic_score_codex":0.00022739418,"about_ca_topic_score_gemma":0.000055695615,"teacher_disagreement_score":0.6388727,"about_ca_system_score_codex":0.000008562108,"about_ca_system_score_gemma":0.000006300653,"threshold_uncertainty_score":0.9998076},"labels":[],"label_agreement":null},{"id":"W2163956111","doi":"10.1128/ec.00149-06","title":"Molecular Genetic Analysis of an <i>SNF2</i> / <i>brahma</i> -Related Gene in <i>Tetrahymena thermophila</i> Suggests Roles in Growth and Nuclear Development","year":2006,"lang":"en","type":"article","venue":"Eukaryotic Cell","topic":"Epigenetics and DNA Methylation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":17,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"York University; University of Toronto","funders":"Canadian Institutes of Health Research; York University","keywords":"Tetrahymena; Biology; Macronucleus; Gene knockout; Gene; Chromatin; Genetics; Cell biology; Chromatin remodeling","score_opus":0.0027468310799673118,"score_gpt":0.1888169600132875,"score_spread":0.18607012893332017,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2163956111","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99328816,0.004652346,0.00013208379,0.000023235587,0.000029662298,0.00018741259,0.000010288235,0.000008657132,0.0016681768],"genre_scores_gemma":[0.99690956,0.00037547149,0.0023040033,0.000078685334,0.000017696857,0.000005805401,0.00024473367,0.000036891128,0.000027135122],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9983232,0.00012667192,0.00057162985,0.0004956443,0.00018891605,0.00029393405],"domain_scores_gemma":[0.99939877,0.000017058748,0.00014573227,0.000318149,0.00004126193,0.00007900495],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00022728296,0.00022404958,0.0003201045,0.0003101366,0.00003312497,0.000020052508,0.00017523945,0.00016704957,0.000008585939],"category_scores_gemma":[0.000011899125,0.00023883446,0.00008083077,0.0006068985,0.00007091097,0.0000067837836,0.00008715548,0.00010137954,0.0000016932496],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00003159828,0.00029467038,0.18769081,0.000021228245,0.000059562353,0.000028423883,0.00014980743,0.009090605,0.8019311,0.000028938772,0.0000035704315,0.0006696927],"study_design_scores_gemma":[0.0006400582,0.000102655875,0.5166593,0.000008467453,0.00007687858,0.0000014199533,0.000020546624,0.00092741725,0.4811401,0.00017721036,0.000033003995,0.00021293211],"about_ca_topic_score_codex":0.00027860893,"about_ca_topic_score_gemma":0.0006656204,"teacher_disagreement_score":0.3289685,"about_ca_system_score_codex":0.000019452049,"about_ca_system_score_gemma":0.00005331511,"threshold_uncertainty_score":0.97393864},"labels":[],"label_agreement":null},{"id":"W2164048622","doi":"10.1128/ec.00387-06","title":"Identification and Characterization of <i>MFA1</i> , the Gene Encoding <i>Candida albicans</i> <b>a</b> -Factor Pheromone","year":2007,"lang":"en","type":"article","venue":"Eukaryotic Cell","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":44,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Biotechnology Research Institute","funders":"Canadian Institutes of Health Research; Science Foundation Ireland","keywords":"Biology; Candida albicans; Gene; Corpus albicans; Genetics; Open reading frame; Saccharomyces cerevisiae; Mating type; Fungal protein; Schizosaccharomyces pombe; Peptide sequence","score_opus":0.011383092395033897,"score_gpt":0.24247211690257006,"score_spread":0.23108902450753616,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2164048622","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9921096,0.00024576005,0.0051135877,0.00025632873,0.00013445925,0.00032586552,0.000015274753,0.000023917988,0.0017752236],"genre_scores_gemma":[0.9972171,0.00023210685,0.00010351213,0.0002344172,0.00011193211,0.0000026481225,0.00003921198,0.000014179643,0.0020448444],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99893135,0.00003070639,0.00037371722,0.00022471324,0.00025194313,0.00018759177],"domain_scores_gemma":[0.9992376,0.00009971508,0.00016526332,0.00032051333,0.00009119018,0.000085692416],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00047591032,0.00010989952,0.00020031443,0.000041586427,0.00007783893,0.00001579293,0.000073187024,0.000062457155,0.00011654397],"category_scores_gemma":[0.00004614154,0.00007983841,0.00005629528,0.00018783726,0.00012911085,0.0000850533,0.000025165067,0.00011912466,0.0000133212325],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000099492674,0.00008392952,0.21986343,0.000091048765,0.000009240761,0.000005517403,0.0003760894,1.5671482e-7,0.7773715,0.000031538617,0.000031085685,0.0020369443],"study_design_scores_gemma":[0.00029380576,0.00004883942,0.62012166,0.000023098497,0.000040404346,0.0000058128385,0.00010686166,0.000035571597,0.37916344,0.000012475273,0.00009591707,0.000052121195],"about_ca_topic_score_codex":0.000029110004,"about_ca_topic_score_gemma":0.000024437513,"teacher_disagreement_score":0.4002582,"about_ca_system_score_codex":0.000038015263,"about_ca_system_score_gemma":0.000044427627,"threshold_uncertainty_score":0.32557163},"labels":[],"label_agreement":null},{"id":"W2164277425","doi":"10.1128/ec.00411-07","title":"Phenotype of a Mechanosensitive Channel Mutant, <i>mid</i> - <i>1</i> , in a Filamentous Fungus, <i>Neurospora crassa</i>","year":2008,"lang":"en","type":"article","venue":"Eukaryotic Cell","topic":"Fungal and yeast genetics research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":48,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"York University","funders":"Natural Sciences and Engineering Research Council of Canada; York University","keywords":"Neurospora crassa; Biology; Mutant; Cell biology; Wild type; Saccharomyces cerevisiae; Fungal protein; Complementation; Biochemistry; Yeast; Gene","score_opus":0.01282541825847552,"score_gpt":0.22248934390883154,"score_spread":0.20966392565035602,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2164277425","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.990438,0.0010375857,0.00019512732,0.00004925334,0.00020809573,0.00031997304,0.000068979454,0.0000125901715,0.0076703946],"genre_scores_gemma":[0.9965936,0.0007323139,0.00019318926,0.00031479387,0.00013732878,0.000013798845,0.00008377794,0.000040939558,0.0018902621],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99826294,0.000102078404,0.00033722242,0.0004899101,0.00033074286,0.0004771086],"domain_scores_gemma":[0.99917334,0.000024974011,0.00010462251,0.00042662353,0.00012692067,0.00014350117],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00017472146,0.00023300445,0.0002808122,0.000101767735,0.000064676984,0.00000843641,0.00026346018,0.00015684101,0.000041190226],"category_scores_gemma":[0.00004882982,0.00023262917,0.000118470685,0.00030486597,0.0001506354,0.000004251697,0.00022464918,0.00019561611,0.000046348665],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00027142468,0.00040775217,0.0041021653,0.00006155398,0.000018181061,0.00019114274,0.00019189471,0.0003113732,0.9928445,0.000015313328,0.0014550596,0.00012959803],"study_design_scores_gemma":[0.0011961014,0.0006264716,0.010544403,0.000024579356,0.000010932312,0.00006255878,0.00008432682,0.00028374343,0.98617595,0.00008470571,0.0006416958,0.00026450522],"about_ca_topic_score_codex":0.00009815718,"about_ca_topic_score_gemma":0.000041959807,"teacher_disagreement_score":0.006668565,"about_ca_system_score_codex":0.00002009172,"about_ca_system_score_gemma":0.00017178486,"threshold_uncertainty_score":0.9486342},"labels":[],"label_agreement":null},{"id":"W2164315014","doi":"10.1128/ec.00002-09","title":"Identification of the <i>Candida albicans</i> Cap1p Regulon","year":2009,"lang":"en","type":"article","venue":"Eukaryotic Cell","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":110,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Institute for Research in Immunology and Cancer","funders":"National Institute of Allergy and Infectious Diseases; Canadian Institutes of Health Research; National Institutes of Health","keywords":"Biology; Regulon; Chromatin immunoprecipitation; Transcription factor; Gene; Candida albicans; Genetics; Chromatin; Transcriptional regulation; Leucine zipper; Cell biology; Computational biology; Promoter; Gene expression","score_opus":0.006425154217999275,"score_gpt":0.23452998827589353,"score_spread":0.22810483405789425,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2164315014","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97488016,0.00034820614,0.0002860676,0.002316254,0.00012970384,0.0002654543,0.000004113765,0.000021701644,0.021748358],"genre_scores_gemma":[0.9853548,0.000029980365,0.00005473309,0.0005330152,0.000052212115,0.0000013805462,0.0000047761437,0.0000059670565,0.013963145],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9991221,0.000036753547,0.0002822428,0.00017757219,0.0002460005,0.00013533312],"domain_scores_gemma":[0.9991835,0.000028308968,0.00011229001,0.00054925797,0.00007288536,0.000053810763],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00021468656,0.00007900195,0.00016493046,0.000023093287,0.00006243005,0.000006492268,0.00011798889,0.000048430393,0.00008234681],"category_scores_gemma":[0.00006708681,0.000053965032,0.000117883435,0.0001886162,0.000090439775,0.000038627928,0.000013295303,0.000111836634,0.000024448986],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00031218826,0.0009945184,0.47452766,0.00026603346,0.000023560799,0.000012928728,0.0006607439,0.000018503913,0.49938908,0.0016559826,0.015367614,0.006771192],"study_design_scores_gemma":[0.00040146956,0.000073582756,0.8823432,0.000037182523,0.000041389558,0.0000035752025,0.00010666229,0.000055713757,0.11607653,0.0004434645,0.0003670707,0.000050160754],"about_ca_topic_score_codex":0.000056504847,"about_ca_topic_score_gemma":0.000028465058,"teacher_disagreement_score":0.40781555,"about_ca_system_score_codex":0.00003634495,"about_ca_system_score_gemma":0.00013612003,"threshold_uncertainty_score":0.220063},"labels":[],"label_agreement":null},{"id":"W2165627464","doi":"10.1128/ec.4.4.673-684.2005","title":"Contribution of CAF-I to Anaphase-Promoting-Complex-Mediated Mitotic Chromatin Assembly in <i>Saccharomyces cerevisiae</i>","year":2005,"lang":"en","type":"article","venue":"Eukaryotic Cell","topic":"Microtubule and mitosis dynamics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":17,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan; Royal University Hospital","funders":"Fondation pour la Recherche Médicale","keywords":"Chromatin; Biology; Anaphase; Phenotype; Cell biology; Mitosis; Histone; Mutant; Saccharomyces cerevisiae; Protein subunit; Mutation; Gene; Genetics; Molecular biology; Chromosome","score_opus":0.0070636923438820555,"score_gpt":0.23454008977977703,"score_spread":0.22747639743589498,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2165627464","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9970011,0.0006291045,0.0007488087,0.0003766634,0.00008282111,0.0004201634,0.00004611794,0.000016958444,0.0006782441],"genre_scores_gemma":[0.9971335,0.00010261841,0.0015345974,0.00043767138,0.00017381803,0.000015558151,0.00040236104,0.000026086676,0.00017381008],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9985524,0.00008152083,0.0004699235,0.00037967024,0.00014639429,0.0003701225],"domain_scores_gemma":[0.9992355,0.00003170491,0.0001540393,0.00035168612,0.00010246635,0.00012461888],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002507922,0.0002059967,0.0002943374,0.00010038172,0.000037638136,0.00001797576,0.0002491605,0.00014863761,0.0000662769],"category_scores_gemma":[0.0001249498,0.00021280634,0.00009916432,0.00023616254,0.000036609505,0.0000071289196,0.000096571355,0.000097738906,0.000072557625],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000040074072,0.00029481386,0.014311189,0.0000594609,0.000018339855,0.0000045212455,0.00009780896,0.00023561042,0.981824,0.000013202141,0.0022746644,0.000826324],"study_design_scores_gemma":[0.0017151819,0.0004408907,0.04934758,0.000080141785,0.000028469989,0.000013207622,0.000054930435,0.0020888152,0.93979347,0.000008967796,0.0060808416,0.0003475295],"about_ca_topic_score_codex":0.00006858287,"about_ca_topic_score_gemma":0.00031732942,"teacher_disagreement_score":0.042030547,"about_ca_system_score_codex":0.000045569286,"about_ca_system_score_gemma":0.00007060677,"threshold_uncertainty_score":0.86779904},"labels":[],"label_agreement":null},{"id":"W2165906021","doi":"10.1128/ec.00278-10","title":"G <sub>1</sub> /S Transcription Factor Orthologues Swi4p and Swi6p Are Important but Not Essential for Cell Proliferation and Influence Hyphal Development in the Fungal Pathogen Candida albicans","year":2011,"lang":"en","type":"article","venue":"Eukaryotic Cell","topic":"Fungal and yeast genetics research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":38,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Biotechnology Research Institute; University of Saskatchewan; Concordia University","funders":"Canadian Institutes of Health Research","keywords":"Candida albicans; Biology; Schizosaccharomyces pombe; Transcription factor; Corpus albicans; Saccharomyces cerevisiae; Hypha; Fungal protein; Cell biology; Yeast; Gene; Cell growth; Cell cycle; Microbiology; Schizosaccharomyces; Genetics","score_opus":0.01732174474942073,"score_gpt":0.22321310855632837,"score_spread":0.20589136380690765,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2165906021","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9981528,0.00057217584,0.00036079154,0.0000401635,0.000058452144,0.0006192458,0.000088127315,0.0000056903054,0.000102582286],"genre_scores_gemma":[0.99860346,0.00047212062,0.00042670066,0.0001192879,0.00007679769,0.000099958525,0.00011180183,0.000016885091,0.00007301417],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.998801,0.00007641122,0.0002712232,0.00037775334,0.00017362884,0.0002999773],"domain_scores_gemma":[0.9995732,0.000017538103,0.00007786501,0.0001606236,0.00008151295,0.000089312205],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00025183705,0.00017486897,0.0001351756,0.000050523926,0.00012365358,0.000042719374,0.00013039727,0.00012987331,0.000004147731],"category_scores_gemma":[0.000024874402,0.00013584555,0.00003792995,0.00005784365,0.00008481645,0.000009955036,0.00005443867,0.000117168966,0.0000020290001],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000219422,0.00011745631,0.10273325,0.00008692337,0.000009179184,0.00001433116,0.0010237889,0.0000043975747,0.89450103,0.000005603805,0.000015962543,0.0012686413],"study_design_scores_gemma":[0.0005299276,0.0002304482,0.3256518,0.0000075997887,0.000011662674,0.000014625462,0.00018421751,0.00006640067,0.67304397,0.000013754184,0.00011439939,0.00013124387],"about_ca_topic_score_codex":0.000039661045,"about_ca_topic_score_gemma":0.0005450269,"teacher_disagreement_score":0.22291853,"about_ca_system_score_codex":0.000009801217,"about_ca_system_score_gemma":0.00012478142,"threshold_uncertainty_score":0.55396205},"labels":[],"label_agreement":null},{"id":"W2167269636","doi":"10.1128/ec.00316-06","title":"In Vivo and In Vitro Anaerobic Mating in <i>Candida albicans</i>","year":2007,"lang":"en","type":"article","venue":"Eukaryotic Cell","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":95,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Biotechnology Research Institute","funders":"Canadian Institutes of Health Research; National Science Foundation","keywords":"Biology; Candida albicans; Farnesol; Mating; Microbiology; Mating type; Auxotrophy; Genetics; Biochemistry; Gene; Mutant","score_opus":0.008327353808501319,"score_gpt":0.25260329699103234,"score_spread":0.244275943182531,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2167269636","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9864245,0.00046979115,0.000053589574,0.00021492345,0.00005816799,0.00026138578,0.0000019809247,0.000011626061,0.012504004],"genre_scores_gemma":[0.996901,0.000055093056,0.00089773873,0.0006206659,0.00003935962,0.0000030137253,0.0000031513246,0.000012761234,0.0014672418],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9987546,0.00003527509,0.0003916906,0.0002848314,0.00015726547,0.00037631023],"domain_scores_gemma":[0.9995006,0.00015271391,0.000042844375,0.00019207502,0.00001367213,0.00009812662],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007547053,0.00012308732,0.00030528186,0.00019764432,0.000017475659,0.0000080175105,0.000051295956,0.00008239663,0.0001828939],"category_scores_gemma":[0.00007976259,0.000117108284,0.000031198677,0.00039684912,0.00006213367,0.00007844055,0.000029797402,0.000288077,0.000011497511],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00049458694,0.00019989202,0.91569775,0.00015891307,0.000001707516,0.00051354774,0.00056058285,0.0000050523013,0.08132753,0.000011182866,0.00014200206,0.0008872407],"study_design_scores_gemma":[0.0018803945,0.00005767375,0.96160823,0.00013505155,0.000006456255,0.000008450113,0.00071862875,0.00019586597,0.035062656,0.00008080587,0.00012820255,0.0001175772],"about_ca_topic_score_codex":0.00092884165,"about_ca_topic_score_gemma":0.0061935866,"teacher_disagreement_score":0.046264872,"about_ca_system_score_codex":0.00015824364,"about_ca_system_score_gemma":0.000060789942,"threshold_uncertainty_score":0.47755373},"labels":[],"label_agreement":null},{"id":"W2167460646","doi":"10.1128/ec.00327-07","title":"Genome-Wide Expression and Location Analyses of the <i>Candida albicans</i> Tac1p Regulon","year":2007,"lang":"en","type":"article","venue":"Eukaryotic Cell","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":128,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Biotechnology Research Institute; Université de Montréal; Institute for Research in Immunology and Cancer","funders":"National Institute of Allergy and Infectious Diseases; Canadian Institutes of Health Research; National Institutes of Health","keywords":"Biology; Promoter; Regulon; Genetics; Gene; Chromatin immunoprecipitation; Candida albicans; ATP-binding cassette transporter; Regulation of gene expression; Gene expression","score_opus":0.01841231944641943,"score_gpt":0.28347786329628466,"score_spread":0.26506554384986525,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2167460646","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98814,0.0013656573,0.0020865018,0.00018179162,0.00006342947,0.0002320778,0.0000020053083,0.000014112377,0.007914432],"genre_scores_gemma":[0.99601394,0.000085980435,0.00030016273,0.00024747854,0.00005432488,0.0000012581559,0.000008116486,0.000009745351,0.003278986],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9990567,0.0000359469,0.00027115343,0.00020735839,0.00025820205,0.00017066856],"domain_scores_gemma":[0.99912757,0.00013916018,0.00011248503,0.00041014858,0.0001208506,0.00008979548],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00035325074,0.00009995732,0.00020261655,0.00004415966,0.00007286509,0.0000058015,0.00007782549,0.000061233004,0.00010365027],"category_scores_gemma":[0.00015458753,0.00006323141,0.00006247763,0.00030082435,0.00015121965,0.000042639906,0.000043296895,0.00011735952,0.0000058033424],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00016093165,0.00009725985,0.7494718,0.00018423077,0.0000092991095,0.0000051844963,0.00019919196,0.000008930349,0.24913119,0.000006080475,0.00034051965,0.00038537206],"study_design_scores_gemma":[0.0003774935,0.000062315085,0.8086778,0.000084249805,0.00006416703,0.000002475076,0.00023590362,0.000016752589,0.19014788,0.00003724684,0.00024197181,0.00005174524],"about_ca_topic_score_codex":0.000090856534,"about_ca_topic_score_gemma":0.000086496875,"teacher_disagreement_score":0.059205994,"about_ca_system_score_codex":0.0000438898,"about_ca_system_score_gemma":0.00008195804,"threshold_uncertainty_score":0.2578502},"labels":[],"label_agreement":null},{"id":"W2167468940","doi":"10.1128/ec.00330-07","title":"Increased Respiration in the <i>sch9Δ</i> Mutant Is Required for Increasing Chronological Life Span but Not Replicative Life Span","year":2008,"lang":"en","type":"article","venue":"Eukaryotic Cell","topic":"Genetics, Aging, and Longevity in Model Organisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":67,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Biotechnology Research Institute","funders":"National Research Council Canada; Canadian Institutes of Health Research","keywords":"Mutant; Biology; Saccharomyces cerevisiae; Respiration; Gene; Cell biology; Genetics","score_opus":0.03319095404360793,"score_gpt":0.2469517053496856,"score_spread":0.2137607513060777,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2167468940","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99007666,0.0004321772,0.006276831,0.001603841,0.00010624203,0.0007781129,0.000045937802,0.000027796485,0.0006524159],"genre_scores_gemma":[0.98995817,0.0002482054,0.0020264075,0.0067917434,0.00051539514,0.00007396208,0.00017355186,0.000039736995,0.0001728258],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9978095,0.00030865846,0.0004883524,0.0006989415,0.00024736105,0.00044715704],"domain_scores_gemma":[0.9985444,0.00012003757,0.0002135835,0.0008356903,0.000110740046,0.00017555401],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007380211,0.0002850157,0.0003002442,0.000060441052,0.00027015613,0.00004192324,0.00046635035,0.00027152037,0.000035011064],"category_scores_gemma":[0.000741609,0.00023584304,0.00014787259,0.00013859077,0.00022756477,0.000009397183,0.00013289676,0.00020255249,0.00003120604],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0010122866,0.0007019319,0.04290314,0.000096341646,0.00007214277,0.0000340637,0.002945338,0.000754828,0.9446362,0.000070998154,0.006366832,0.00040587236],"study_design_scores_gemma":[0.0030747636,0.0016112659,0.18108337,0.000027377499,0.00009586007,0.00009299003,0.0005918427,0.0028305443,0.8044998,0.00019994873,0.005158981,0.000733265],"about_ca_topic_score_codex":0.0004214776,"about_ca_topic_score_gemma":0.00007770013,"teacher_disagreement_score":0.14013644,"about_ca_system_score_codex":0.000041035633,"about_ca_system_score_gemma":0.00029195394,"threshold_uncertainty_score":0.96173996},"labels":[],"label_agreement":null},{"id":"W2167525762","doi":"10.1128/ec.00055-10","title":"Role of Aspergillus fumigatus DvrA in Host Cell Interactions and Virulence","year":2010,"lang":"en","type":"article","venue":"Eukaryotic Cell","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":31,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"National Center for Research Resources; National Institute of Allergy and Infectious Diseases; Canadian Institutes of Health Research; National Institutes of Health","keywords":"Biology; Virulence; Aspergillus fumigatus; Microbiology; Candida albicans; Mutant; Virulence factor; Proinflammatory cytokine; Tumor necrosis factor alpha; Fungal protein; Transcription factor; Cell biology; Gene; Immunology; Inflammation; Genetics","score_opus":0.005516631714606671,"score_gpt":0.23847538690154532,"score_spread":0.23295875518693865,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2167525762","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9619314,0.00044454748,0.00001649975,0.0001022949,0.00015790948,0.00017484967,0.0000073236415,0.000015830436,0.03714935],"genre_scores_gemma":[0.9967286,0.00009720285,0.00066445215,0.00007931307,0.000052149604,0.000003438817,0.0000050073295,0.000011538823,0.002358325],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9991482,0.000021099053,0.00025046483,0.00024210206,0.0001468583,0.00019129537],"domain_scores_gemma":[0.99933714,0.000106455926,0.00006204126,0.0003197729,0.000055553755,0.00011901978],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014972885,0.00011030075,0.00023373969,0.00008077024,0.000033128923,0.000007746398,0.000069123336,0.000072701805,0.0004970496],"category_scores_gemma":[0.000078310564,0.00009827402,0.000056580146,0.00014571902,0.00013624685,0.00008103441,0.00004426617,0.00041626763,0.000057168334],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008449807,0.00027788623,0.50413,0.00010254844,0.000003022234,0.000013971408,0.00032124546,6.77497e-7,0.49419683,0.000059936672,0.00006862764,0.00074076053],"study_design_scores_gemma":[0.00059284596,0.00010127161,0.8900982,0.000050664778,0.000025375413,0.000009204048,0.00060016976,0.00020365104,0.107582524,0.00008708581,0.0005621811,0.00008682561],"about_ca_topic_score_codex":0.00022102824,"about_ca_topic_score_gemma":0.0008948566,"teacher_disagreement_score":0.38661432,"about_ca_system_score_codex":0.00002346738,"about_ca_system_score_gemma":0.000076544835,"threshold_uncertainty_score":0.54423445},"labels":[],"label_agreement":null},{"id":"W2167605032","doi":"10.1128/ec.00262-09","title":"<i>abc3</i> <sup>+</sup> Encodes an Iron-Regulated Vacuolar ABC-Type Transporter in <i>Schizosaccharomyces pombe</i>","year":2009,"lang":"en","type":"article","venue":"Eukaryotic Cell","topic":"Fungal and yeast genetics research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":24,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Sherbrooke","funders":"Faculty of Medicine and Health, University of Sydney; Natural Sciences and Engineering Research Council of Canada; Fondation des Etoiles","keywords":"Schizosaccharomyces pombe; Vacuole; Biology; Saccharomyces cerevisiae; Schizosaccharomyces; Antiporter; Biochemistry; Cell biology; Transport protein; Yeast; Molecular biology","score_opus":0.009058097276680896,"score_gpt":0.24089290295564628,"score_spread":0.2318348056789654,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2167605032","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9932298,0.0016919852,0.00006723537,0.00020300101,0.00009534282,0.00029277932,0.00002820805,0.00003291418,0.0043587363],"genre_scores_gemma":[0.995706,0.00049906014,0.00075956824,0.00060326594,0.0002588838,0.000007113057,0.00041340766,0.000042070093,0.0017105944],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9977944,0.00012798046,0.00038507133,0.0006954757,0.00033602116,0.00066108286],"domain_scores_gemma":[0.9989375,0.000014641309,0.00005741666,0.00062184356,0.0000952673,0.00027334955],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00027565807,0.00033200165,0.00027932067,0.000110878646,0.00009575867,0.0000557558,0.0004952363,0.00028342582,0.00020673913],"category_scores_gemma":[0.000016281996,0.00031279583,0.000120070115,0.00030841655,0.0000896034,0.000016373739,0.00005620951,0.00029308198,0.00009415592],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005073581,0.0008635253,0.03769634,0.00006347663,0.000023547575,0.00011568236,0.00034439686,0.005701706,0.9503575,0.00003629944,0.0013110505,0.002979129],"study_design_scores_gemma":[0.003368529,0.0033489743,0.14285451,0.00006795595,0.00005706596,0.00006860424,0.00030875334,0.004642894,0.83796644,0.0005698917,0.0055447975,0.0012015564],"about_ca_topic_score_codex":0.000048011625,"about_ca_topic_score_gemma":0.000037406346,"teacher_disagreement_score":0.112391025,"about_ca_system_score_codex":0.000023941375,"about_ca_system_score_gemma":0.00014873243,"threshold_uncertainty_score":0.9999324},"labels":[],"label_agreement":null},{"id":"W2169337056","doi":"10.1128/ec.3.6.1433-1444.2004","title":"Potential Link between the NIMA Mitotic Kinase and Nuclear Membrane Fission during Mitotic Exit in<i>Aspergillus nidulans</i>","year":2004,"lang":"en","type":"article","venue":"Eukaryotic Cell","topic":"Microtubule and mitosis dynamics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":30,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Biotechnology Research Institute","funders":"National Institute of General Medical Sciences; National Institutes of Health","keywords":"Aspergillus nidulans; Biology; Mitosis; Cell biology; Nuclear membrane; Cell cycle; Nuclear protein; Cytoplasm; Molecular biology; Cell; Genetics; Gene; Transcription factor","score_opus":0.004262744400885021,"score_gpt":0.19170278511395009,"score_spread":0.18744004071306505,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2169337056","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99701,0.0009797756,0.00012011056,0.0007552531,0.00019010826,0.00028191926,0.00001459203,0.000019779342,0.00062846346],"genre_scores_gemma":[0.9973592,0.0010072589,0.00034878333,0.00021092678,0.000597247,0.0000051277557,0.000075613796,0.000049918213,0.00034592955],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9986261,0.000063175044,0.00029765663,0.0004648198,0.00014988499,0.00039836063],"domain_scores_gemma":[0.99931073,0.000014231686,0.000077965735,0.00043861492,0.000027824086,0.00013065364],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001225508,0.00024833056,0.00021789034,0.000087170854,0.00018073163,0.000049660703,0.00026999976,0.00018479118,0.000027505439],"category_scores_gemma":[0.000024138071,0.00020341355,0.00010788191,0.00015529535,0.00011631924,0.000008056464,0.00023359146,0.00024153382,0.00003190978],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010174228,0.00011975401,0.013245734,0.00017471668,0.000045351044,0.00012455323,0.00020321482,0.0015176545,0.9835374,0.00002247461,0.00016686374,0.00074057496],"study_design_scores_gemma":[0.007449404,0.0006504209,0.35438457,0.00025482557,0.00026697599,0.0002437226,0.00039886456,0.0005295081,0.6301283,0.00033176696,0.004168352,0.0011932774],"about_ca_topic_score_codex":0.00009869252,"about_ca_topic_score_gemma":0.000046191704,"teacher_disagreement_score":0.35340905,"about_ca_system_score_codex":0.000029743629,"about_ca_system_score_gemma":0.00004116705,"threshold_uncertainty_score":0.8294964},"labels":[],"label_agreement":null},{"id":"W2169494061","doi":"10.1128/ec.05030-11","title":"Modulation of Morphogenesis in Candida albicans by Various Small Molecules","year":2011,"lang":"en","type":"review","venue":"Eukaryotic Cell","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":140,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal","funders":"Natural Sciences and Engineering Research Council of Canada; Fonds Québécois de la Recherche sur la Nature et les Technologies","keywords":"Candida albicans; Biology; Morphogenesis; Microbiology; Hypha; Corpus albicans; Yeast; Fungal protein; Cell biology; Farnesol; Saccharomyces cerevisiae; Genetics; Gene; Biochemistry","score_opus":0.03925684452116513,"score_gpt":0.28240168296921386,"score_spread":0.24314483844804874,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2169494061","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0027888918,0.9899139,0.00042747203,0.000008478699,0.00009451525,0.0008859107,0.000086425585,0.000021587452,0.0057728267],"genre_scores_gemma":[0.010577875,0.98393744,0.00044107967,0.000028353437,0.000039367205,0.000028287317,0.0003186264,0.00005913167,0.004569855],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99803543,0.00013140505,0.0008206547,0.00049708225,0.00020803305,0.00030741916],"domain_scores_gemma":[0.9987328,0.000108912325,0.0003284013,0.0006279838,0.0000679129,0.00013397785],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00025028712,0.00036384515,0.0017127711,0.00018877132,0.000022195698,0.00000556568,0.00018012826,0.00033647762,0.000437124],"category_scores_gemma":[0.00006257288,0.00030294788,0.00041707806,0.00034422483,0.000090198126,0.000023396757,0.00004806328,0.00030272623,0.00005590665],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00016059373,0.001974435,0.04809061,0.08990065,0.00032609087,0.00023497855,0.00044440164,0.000010840557,0.00021454174,0.00011253774,0.0031103683,0.85541993],"study_design_scores_gemma":[0.0037230044,0.0015420356,0.14549324,0.03649972,0.007164594,0.000104159655,0.00016802433,0.00046263632,0.0002915557,0.00023178941,0.8018263,0.002492956],"about_ca_topic_score_codex":0.0017765906,"about_ca_topic_score_gemma":0.0004996639,"teacher_disagreement_score":0.85292697,"about_ca_system_score_codex":0.00019701643,"about_ca_system_score_gemma":0.00046300073,"threshold_uncertainty_score":0.99994224},"labels":[],"label_agreement":null},{"id":"W2171195564","doi":"10.1128/ec.00015-11","title":"Grx4 Monothiol Glutaredoxin Is Required for Iron Limitation-Dependent Inhibition of Fep1","year":2011,"lang":"en","type":"article","venue":"Eukaryotic Cell","topic":"Trace Elements in Health","field":"Nursing","cited_by":57,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Sherbrooke","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Glutaredoxin; Schizosaccharomyces pombe; Transcription factor; Biology; Thioredoxin; Psychological repression; Gene; Transcription (linguistics); Chromatin; Cell biology; Promoter; Biochemistry; Gene expression; Saccharomyces cerevisiae","score_opus":0.05189698261616722,"score_gpt":0.2803728667274276,"score_spread":0.2284758841112604,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2171195564","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9906051,0.00020544433,0.0025135973,0.0006306191,0.0012581114,0.0013045025,0.000095254276,0.000104086874,0.003283288],"genre_scores_gemma":[0.98193866,0.000014199682,0.01665354,0.00048779993,0.0001401771,0.000058238304,0.00006106142,0.000053852484,0.00059244764],"study_design_codex":"observational","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9982377,0.00008160844,0.000608027,0.00036898212,0.00030945044,0.00039421138],"domain_scores_gemma":[0.99886423,0.00018678319,0.0003300414,0.00039860347,0.00011610082,0.000104221595],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00037149133,0.0001861929,0.00024448152,0.00013714474,0.0001139299,0.0000135513965,0.0001547179,0.000127234,0.00029956855],"category_scores_gemma":[0.00007862025,0.00020216667,0.00010517406,0.00013271176,0.000055013803,0.0002109796,0.000035530255,0.00013419722,0.0001229664],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0075047133,0.009834359,0.40115163,0.009652464,0.00023669457,0.000056252095,0.18729079,0.0005330704,0.20000888,0.0047076074,0.09911964,0.0799039],"study_design_scores_gemma":[0.0054894583,0.0025312318,0.20388415,0.0002959918,0.0002379055,0.000006904773,0.0024569808,0.0014219268,0.77274865,0.0095352335,0.00069447927,0.00069710176],"about_ca_topic_score_codex":0.0002815214,"about_ca_topic_score_gemma":0.000080813385,"teacher_disagreement_score":0.5727397,"about_ca_system_score_codex":0.00018742461,"about_ca_system_score_gemma":0.00004740409,"threshold_uncertainty_score":0.8244118},"labels":[],"label_agreement":null},{"id":"W2171315640","doi":"10.1128/ec.00312-12","title":"Complete Genome Sequences from Three Genetically Distinct Strains Reveal High Intraspecies Genetic Diversity in the Microsporidian Encephalitozoon cuniculi","year":2013,"lang":"en","type":"article","venue":"Eukaryotic Cell","topic":"Parasitic Infections and Diagnostics","field":"Immunology and Microbiology","cited_by":62,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia; Canadian Institute for Advanced Research","funders":"National Institute of Allergy and Infectious Diseases; Canadian Institutes of Health Research; U.S. Department of Health and Human Services; National Institutes of Health; Compute Canada; Health Canada; U.S. Public Health Service; Canadian Institute for Advanced Research","keywords":"Biology; Encephalitozoon cuniculi; Genetics; Genome; Genetic diversity; Intergenic region; Nonsynonymous substitution; Genetic variation; Comparative genomics; Gene; Genomics; Microsporidia; Evolutionary biology; Population","score_opus":0.01925847683569717,"score_gpt":0.21228993345980754,"score_spread":0.19303145662411036,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2171315640","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9937504,0.0010778785,0.0006233643,0.00040540242,0.0006192423,0.00046069533,0.00030620443,0.000035007128,0.0027218068],"genre_scores_gemma":[0.998208,0.000100602905,0.00075152074,0.00032410418,0.0001297355,0.00002259074,0.00027393218,0.000010394958,0.00017916068],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99847776,0.00022395227,0.00034939876,0.0003731813,0.0000787279,0.0004969702],"domain_scores_gemma":[0.9988789,0.00048507276,0.00009818663,0.00042590586,0.00006618492,0.000045767138],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00016468394,0.00023294373,0.00027735293,0.00006587237,0.00047218468,0.00006097464,0.0005761879,0.00017643186,0.0028359306],"category_scores_gemma":[0.00004814673,0.0001770755,0.00008717617,0.0001702837,0.00063163973,0.0000740142,0.000226558,0.00035442266,0.0018067161],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000015116834,0.00039291993,0.9180722,0.00001825968,0.00009025308,0.0000994449,0.0018140151,0.00012651904,0.07615685,0.0009817141,0.0013989328,0.00083375705],"study_design_scores_gemma":[0.00058243517,0.00013707209,0.99391794,0.000013022912,0.000071689734,0.000030134546,0.0004074943,0.0000136750605,0.0005398092,0.0036718764,0.00038290975,0.00023192339],"about_ca_topic_score_codex":0.011906025,"about_ca_topic_score_gemma":0.0022310955,"teacher_disagreement_score":0.07584573,"about_ca_system_score_codex":0.00007422161,"about_ca_system_score_gemma":0.00006650527,"threshold_uncertainty_score":0.9989705},"labels":[],"label_agreement":null},{"id":"W2171444280","doi":"10.1128/ec.00153-14","title":"Asexual Propagation of a Virulent Clone Complex in a Human and Feline Outbreak of Sporotrichosis","year":2014,"lang":"en","type":"article","venue":"Eukaryotic Cell","topic":"Fungal Infections and Studies","field":"Medicine","cited_by":57,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"Coordenação de Aperfeiçoamento de Pessoal de Nível Superior; Fundação de Amparo à Pesquisa do Estado de São Paulo; Conselho Nacional de Desenvolvimento Científico e Tecnológico; Genome British Columbia; Genome Canada","keywords":"Biology; Sporotrichosis; Genetics; Sporothrix schenckii; Sporothrix; Population; Mating type; Locus (genetics); Genotype; Microbiology; Gene","score_opus":0.02242768216888275,"score_gpt":0.2747172535578173,"score_spread":0.25228957138893454,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2171444280","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9962837,0.00016886077,0.0002031977,0.00015842581,0.00003355818,0.00024726213,0.0000060297807,0.000009699302,0.0028892634],"genre_scores_gemma":[0.9988549,0.00003272299,0.00074531155,0.000041727213,0.00004589842,0.0000069813045,0.00001872928,0.0000068505697,0.00024689562],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9993518,0.000025456196,0.00030136533,0.000118544245,0.00011400718,0.00008885222],"domain_scores_gemma":[0.9996247,0.000048880906,0.00009688205,0.00012171766,0.00007291031,0.000034852677],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00020474575,0.00007562903,0.00028891553,0.00012678694,0.000028108489,0.0000020549624,0.000020425427,0.000031028765,0.00004444849],"category_scores_gemma":[0.000049693233,0.00006254358,0.00003051102,0.00015538505,0.000070259775,0.000018970883,0.000031532316,0.0000694371,0.0000022310282],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011132752,0.0011468828,0.90911144,0.0007692878,0.000033673092,0.0000045268134,0.0007234137,0.00003509935,0.08409342,0.00035231197,0.00056113047,0.0030574705],"study_design_scores_gemma":[0.0016723555,0.0009032834,0.9853694,0.00008608702,0.000059158014,0.000005674435,0.00014539591,0.0017527754,0.009731498,0.000054763757,0.00015654539,0.000063101594],"about_ca_topic_score_codex":0.00062121643,"about_ca_topic_score_gemma":0.00008127621,"teacher_disagreement_score":0.07625791,"about_ca_system_score_codex":0.00002013877,"about_ca_system_score_gemma":0.000011380131,"threshold_uncertainty_score":0.25504532},"labels":[],"label_agreement":null},{"id":"W2171820658","doi":"10.1128/ec.00291-12","title":"The Carboxyl Terminus of Rtt109 Functions in Chaperone Control of Histone Acetylation","year":2013,"lang":"en","type":"article","venue":"Eukaryotic Cell","topic":"Histone Deacetylase Inhibitors Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":23,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Toronto Metropolitan University","funders":"National Institute of Environmental Health Sciences; Natural Sciences and Engineering Research Council of Canada; National Institutes of Health; Universities Space Research Association; Banting Research Foundation","keywords":"Histone H3; Acetylation; Histone; Histone octamer; Biology; Histone code; SAP30; Histone H1; Cell biology; Lysine; Biochemistry; Histone methyltransferase; Chromatin; Nucleosome; Amino acid; Gene","score_opus":0.005221526614378155,"score_gpt":0.2492016795278911,"score_spread":0.24398015291351294,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2171820658","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99357235,0.0012476159,0.00036096704,0.00019427146,0.00013409228,0.000376193,0.000010805084,0.000003988627,0.0040996876],"genre_scores_gemma":[0.99483883,0.000050617906,0.000056222947,0.000018775281,0.00006930171,0.00004447585,0.0000258615,0.000014912498,0.004881006],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99900776,0.00008826637,0.0003231301,0.00018572756,0.00018218801,0.0002129409],"domain_scores_gemma":[0.9992573,0.0000605399,0.00011652391,0.00038195058,0.00013241543,0.000051235318],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00022794842,0.00009789169,0.00015353756,0.00006225623,0.000053018124,0.000006286174,0.00016614207,0.00009463365,0.00007019589],"category_scores_gemma":[0.00010059954,0.00007962629,0.000070966234,0.00012802448,0.00020015216,0.0000046569767,0.000053413667,0.000106174164,0.00003785499],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000061379935,0.00015390178,0.006701073,0.000032777934,0.000015626545,0.0000015962486,0.00010339223,0.00021139787,0.98825264,0.000014981846,0.002651012,0.0018002292],"study_design_scores_gemma":[0.0021687795,0.00056697335,0.087415576,0.000027002116,0.00002232186,0.000008540443,0.00026208806,0.0016773624,0.9044625,0.000028073853,0.0031587568,0.00020198672],"about_ca_topic_score_codex":0.0003979559,"about_ca_topic_score_gemma":0.00015431168,"teacher_disagreement_score":0.08379009,"about_ca_system_score_codex":0.000039501116,"about_ca_system_score_gemma":0.00009374982,"threshold_uncertainty_score":0.32470658},"labels":[],"label_agreement":null},{"id":"W2192699374","doi":"10.1128/ec.00106-15","title":"Eisosome Ultrastructure and Evolution in Fungi, Microalgae, and Lichens","year":2015,"lang":"en","type":"article","venue":"Eukaryotic Cell","topic":"Protist diversity and phylogeny","field":"Biochemistry, Genetics and Molecular Biology","cited_by":54,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"National Institute of Allergy and Infectious Diseases; National Center for Research Resources; National Institute of General Medical Sciences","keywords":"Biology; Lineage (genetic); Saccharomyces cerevisiae; Ultrastructure; Gene; Biophysics; Cell biology; Genetics; Botany","score_opus":0.006822208232244546,"score_gpt":0.1916429380765857,"score_spread":0.18482072984434114,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2192699374","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9945661,0.0038558675,0.00017499857,0.000045036402,0.000073605646,0.00010175039,0.000014801084,0.0000045976444,0.0011632786],"genre_scores_gemma":[0.99874735,0.00010437416,0.00044202962,0.00010365878,0.00006819515,0.0000014072281,0.00003535173,0.000005811325,0.00049179496],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9995162,0.000028391967,0.000069583744,0.00020125446,0.000048738264,0.0001358643],"domain_scores_gemma":[0.99974906,0.000004877727,0.000022812179,0.000107841515,0.000020823807,0.00009456788],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00007766556,0.00008515046,0.00007758094,0.000029012195,0.000028187796,0.000012343363,0.000059545204,0.00010482217,0.0000063947855],"category_scores_gemma":[0.000016334552,0.00008750329,0.000014761819,0.00004598558,0.000058675243,0.0000033610272,0.000084325045,0.00006994843,0.0000062555305],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00003607727,0.000019418045,0.9836696,0.000017549093,0.0000050810368,0.000005059847,0.0001305676,0.000015088711,0.015100734,0.000024603414,0.00080572785,0.00017053891],"study_design_scores_gemma":[0.00063048035,0.00011070644,0.98432493,0.000004477042,0.000008318263,0.000026060612,0.00010560983,0.000022807346,0.014267292,0.00034985674,0.00004405501,0.00010542543],"about_ca_topic_score_codex":0.0000836684,"about_ca_topic_score_gemma":0.00006340384,"teacher_disagreement_score":0.004181313,"about_ca_system_score_codex":0.000012667888,"about_ca_system_score_gemma":0.000033196335,"threshold_uncertainty_score":0.35682806},"labels":[{"model":"gemma","categories":[],"domain":null,"study_design":"observational","genre":"empirical","about_ca_system":false,"about_ca_topic":false,"confidence":"low"},{"model":"gpt","categories":[],"domain":null,"study_design":"observational","genre":"empirical","about_ca_system":false,"about_ca_topic":false,"confidence":"low"}],"label_agreement":"agree"},{"id":"W2315274736","doi":"10.1128/ec.00087-15","title":"A Cyclic GMP-Dependent K <sup>+</sup> Channel in the Blastocladiomycete Fungus Blastocladiella emersonii","year":2015,"lang":"en","type":"article","venue":"Eukaryotic Cell","topic":"Protist diversity and phylogeny","field":"Biochemistry, Genetics and Molecular Biology","cited_by":26,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canadian Institute for Advanced Research","funders":"Biotechnology and Biological Sciences Research Council","keywords":"Biology; Cyclic gmp; Biochemistry; Cell biology; Enzyme","score_opus":0.018350915983650847,"score_gpt":0.22003372732615042,"score_spread":0.20168281134249957,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2315274736","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9763093,0.00130073,0.0004529188,0.00034360535,0.00023571515,0.000577401,0.000038584138,0.000019506702,0.020722263],"genre_scores_gemma":[0.9954186,0.00006874699,0.0001175933,0.00094185246,0.00036170287,0.000032982378,0.000081668586,0.000024444706,0.00295238],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99826705,0.00020753122,0.00022962134,0.00048121647,0.00031181498,0.0005027471],"domain_scores_gemma":[0.9990618,0.000027866365,0.00008138706,0.0005803075,0.00005840619,0.00019023167],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005016991,0.00025762626,0.00020394102,0.00008021216,0.000111350666,0.000045059427,0.0006487107,0.0002012078,0.000058037673],"category_scores_gemma":[0.000046088455,0.00022107633,0.00013235498,0.00019224355,0.00010806506,0.0000073554806,0.00024192443,0.00026090193,0.00030710528],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.004298212,0.005129509,0.5041537,0.0007471071,0.00093039125,0.002497201,0.04352161,0.09217912,0.07213809,0.0010074327,0.26762766,0.0057699387],"study_design_scores_gemma":[0.04829199,0.016151337,0.3662348,0.00040804877,0.001162681,0.0022473752,0.06505187,0.022448031,0.33385152,0.005941064,0.12846158,0.009749686],"about_ca_topic_score_codex":0.00015654863,"about_ca_topic_score_gemma":0.00011136089,"teacher_disagreement_score":0.26171342,"about_ca_system_score_codex":0.000049588292,"about_ca_system_score_gemma":0.00014008631,"threshold_uncertainty_score":0.9015231},"labels":[],"label_agreement":null},{"id":"W24951438","doi":"10.1128/ec.00138-14","title":"Isolation of novel dinucleotide tandem repeat sequences from the pineapple genome","year":2007,"lang":"en","type":"article","venue":"Eukaryotic Cell","topic":"Pineapple and bromelain studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Canadian Institutes of Health Research; Wellcome Trust","keywords":"Microsatellite; GenBank; Genetics; Biology; Primer (cosmetics); Genetic marker; Germplasm; Population; Genome; Computational biology; Gene; Botany","score_opus":0.01455113164629396,"score_gpt":0.23588840230347674,"score_spread":0.22133727065718278,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W24951438","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9687747,0.0019639903,0.024149196,0.00014879038,0.00016393603,0.00014138687,0.000045731013,0.00000998087,0.0046023107],"genre_scores_gemma":[0.9956201,0.00021978261,0.0027463336,0.0002139578,0.00046281193,0.0000030898484,0.00014027406,0.000011809009,0.00058187486],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9992028,0.000016449287,0.000236946,0.00022812508,0.00012736999,0.00018833566],"domain_scores_gemma":[0.99946076,0.00005651477,0.00011245452,0.0002834619,0.000053995278,0.000032830172],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002573289,0.00011659449,0.00013104918,0.00001588812,0.00009138628,0.000009509443,0.00019196184,0.00006831466,0.00003139005],"category_scores_gemma":[0.00003760012,0.00008332285,0.00007578445,0.00009426612,0.00010683141,0.0000032027685,0.00011104222,0.000063030595,0.000009185953],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00002908789,0.00007383746,0.060978897,0.000007401113,0.00004345073,0.0000019560468,0.00013788583,0.000056104524,0.9368957,0.000023348706,0.0015290717,0.00022320727],"study_design_scores_gemma":[0.0009698392,0.00024981025,0.61815727,0.000017814538,0.000060820577,0.0000072158723,0.0007575651,0.00013992852,0.36454687,0.00010267001,0.014709032,0.00028117167],"about_ca_topic_score_codex":0.00016045409,"about_ca_topic_score_gemma":0.00013705359,"teacher_disagreement_score":0.5723489,"about_ca_system_score_codex":0.000010170147,"about_ca_system_score_gemma":0.000025650426,"threshold_uncertainty_score":0.33978072},"labels":[],"label_agreement":null},{"id":"W4231574665","doi":"10.1128/ec.4.12.2170.2005","title":"Unique Mitochondrial Genome Structure in Diplonemids, the Sister Group of Kinetoplastids","year":2005,"lang":"en","type":"article","venue":"Eukaryotic Cell","topic":"Marine Biology and Ecology Research","field":"Earth and Planetary Sciences","cited_by":6,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Canadian Institute for Advanced Research","funders":"","keywords":"Biology; Genetics; Genome; Mitochondrial DNA; Sister group; Computational biology; Evolutionary biology; Gene; Phylogenetics; Clade","score_opus":0.007586674599151799,"score_gpt":0.20044220053627312,"score_spread":0.19285552593712132,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4231574665","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98886037,0.00027050445,0.000008221195,0.0004854128,0.0002999797,0.00019003256,0.000024718205,0.000009329243,0.009851447],"genre_scores_gemma":[0.9974522,0.000037294343,0.00045422176,0.00018726272,0.00030058363,0.0000010561464,0.00008147825,0.000002468277,0.0014834497],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9990291,0.0001557758,0.00021547197,0.00019265321,0.00010959214,0.00029741856],"domain_scores_gemma":[0.9993137,0.00036895758,0.000049995964,0.0001963432,0.000014979621,0.000056012683],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00019372445,0.00010292323,0.0001593896,0.00006885604,0.00006793427,0.000009820394,0.0003147572,0.00013115667,0.008246019],"category_scores_gemma":[0.00004167143,0.00006462579,0.000039492174,0.00015796593,0.00017767386,0.000060889353,0.000034839843,0.00030145314,0.00012922689],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009712209,0.000024524497,0.9961211,0.000015233046,0.0000062989025,0.000007718479,0.000109411434,0.001547281,0.00029165752,0.000034278775,0.00035694963,0.001388395],"study_design_scores_gemma":[0.00035766175,0.00013401169,0.99506027,0.000003134815,0.0000054825155,0.00000988196,0.00002416551,0.0011843708,0.0001530373,0.00028216257,0.0027085445,0.000077256984],"about_ca_topic_score_codex":0.0004213198,"about_ca_topic_score_gemma":0.016490763,"teacher_disagreement_score":0.016069444,"about_ca_system_score_codex":0.0000053553654,"about_ca_system_score_gemma":0.000034818666,"threshold_uncertainty_score":0.9926606},"labels":[],"label_agreement":null}]}