{"meta":{"query_hash":"bf321014d9c6","filters":{"venue":"FEMS Microbiology Letters"},"cohort_total":466,"direct_labels_cover":1,"predictions_cover":466,"exported":466,"export_cap":100000,"truncated":false,"label_status":"direct model label, unvalidated","prediction_status":"machine_predicted_unvalidated (Codex and Gemma teacher distillation)","score_status":"score_only:v0-immature-baseline","snapshot":{"source":"OpenAlex, pinned release, all 482 partitions","release":"2026-06-24","frame_built":"2026-07-12"},"permalink":"https://metacan.xera.ac/q/bf321014d9c6","api":"https://metacan.xera.ac/api/v1/cohort?venue=FEMS+Microbiology+Letters"},"results":[{"id":"W1499378530","doi":"10.1111/j.1574-6968.2011.02274.x","title":"V-REVCOMP: automated high-throughput detection of reverse complementary 16S rRNA gene sequences in large environmental and taxonomic datasets","year":2011,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Genomics and Phylogenetic Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":13,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"Engineering and Physical Sciences Research Council; Genome British Columbia; Tula Foundation","keywords":"Biology; 16S ribosomal RNA; Software; DNA sequencing; Computational biology; Sequence (biology); Sequence analysis; Gene; Genetics; Computer science","score_opus":0.011674310729318446,"score_gpt":0.201763213783751,"score_spread":0.19008890305443255,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1499378530","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99701744,0.00065537245,0.00008966312,0.00008308591,0.00021650647,0.00019400092,0.0017309533,0.000005523021,0.0000074473564],"genre_scores_gemma":[0.99567163,0.0003122581,0.0019001843,0.00077557884,0.000039266215,0.000012863889,0.0012732253,0.000011258606,0.0000037169305],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9990385,0.0000805875,0.00026030286,0.00035546898,0.000018327999,0.00024681713],"domain_scores_gemma":[0.9996208,0.000007866414,0.00012412618,0.00021462825,0.000004206541,0.000028360948],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012608501,0.00016013476,0.00020162963,0.00005232602,0.000059687558,0.0000029689534,0.00013813183,0.00009123982,0.00002690479],"category_scores_gemma":[0.0000029512871,0.00016084159,0.000037496648,0.00002593697,0.00024058361,0.0000020260036,0.00021311674,0.0000642867,0.0000065547006],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000057136087,0.000048126385,0.026217116,0.000007119704,0.000091969094,0.000005328983,0.00010004421,0.000007852369,0.97207904,0.0000022963009,0.0012593602,0.00012459],"study_design_scores_gemma":[0.0011337509,0.00022669564,0.12371089,0.00000664686,0.000028943614,0.00006002343,0.00014871173,0.00001570351,0.86486924,0.0000090172325,0.009556097,0.00023429815],"about_ca_topic_score_codex":0.00045528216,"about_ca_topic_score_gemma":0.00037357942,"teacher_disagreement_score":0.10720985,"about_ca_system_score_codex":0.000023128696,"about_ca_system_score_gemma":0.000008782914,"threshold_uncertainty_score":0.65589297},"labels":[],"label_agreement":null},{"id":"W1599002996","doi":"10.1111/j.1574-6968.2010.02130.x","title":"Pseudomonas aeruginosa and their small diffusible extracellular molecules inhibit Aspergillus fumigatus biofilm formation","year":2010,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Bacterial biofilms and quorum sensing","field":"Biochemistry, Genetics and Molecular Biology","cited_by":198,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Hospital for Sick Children","keywords":"Biofilm; Aspergillus fumigatus; Pseudomonas aeruginosa; Microbiology; Quorum sensing; Chemistry; Biology; Bacteria","score_opus":0.00622451992788149,"score_gpt":0.18189434245116598,"score_spread":0.1756698225232845,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1599002996","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9961166,0.0006120009,0.0005543454,0.0015710207,0.0007088924,0.00023667837,0.00007816762,0.00003724513,0.000085095366],"genre_scores_gemma":[0.9939204,0.000096007796,0.002604766,0.002089634,0.0004010639,0.000008710226,0.0007595281,0.00003495744,0.00008492283],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99862844,0.00007719071,0.0002878299,0.00049901014,0.000025902833,0.00048160934],"domain_scores_gemma":[0.99932337,0.000016550453,0.0001356838,0.0003739646,0.000044163316,0.00010626937],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00016196218,0.0003198673,0.00024244134,0.00008162937,0.00018153574,0.000058807476,0.00016826518,0.00043085238,0.000021002315],"category_scores_gemma":[0.0000262691,0.00026981308,0.00011093123,0.00007038224,0.00032908315,0.000010820306,0.00017576081,0.00028927525,0.000017547278],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000049332186,0.000029193468,0.0005190053,0.00001396895,0.00004235235,0.000008217644,0.00009269866,0.0000029511782,0.9966049,0.00006666361,0.00097020494,0.0016004721],"study_design_scores_gemma":[0.0006253493,0.000100755395,0.0006186249,0.000012725239,0.000016091,0.00042595444,0.000046768262,0.000030627918,0.9636643,0.0000061481683,0.034102876,0.0003497999],"about_ca_topic_score_codex":0.00004030606,"about_ca_topic_score_gemma":0.00013445532,"teacher_disagreement_score":0.033132672,"about_ca_system_score_codex":0.000009622906,"about_ca_system_score_gemma":0.000024229326,"threshold_uncertainty_score":0.9999754},"labels":[],"label_agreement":null},{"id":"W1718106869","doi":"10.1111/j.1574-6968.2006.00460.x","title":"Analysis of in vivo expressed genes in Mannheimia haemolytica A1","year":2006,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Microbial infections and disease research","field":"Immunology and Microbiology","cited_by":15,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Biology; Gene; Virulence; Gene expression; Polymerase chain reaction; Regulator gene; In vivo; Microbiology; Reverse transcriptase; Real-time polymerase chain reaction; Genetics","score_opus":0.010833319654216134,"score_gpt":0.24685171681941367,"score_spread":0.23601839716519754,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1718106869","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99678236,0.0014512369,0.00009988729,0.00056635117,0.00019924091,0.00024401539,0.00023488949,0.000029153081,0.00039287447],"genre_scores_gemma":[0.99862564,0.00004933944,0.000048123446,0.000336845,0.00001991729,0.000031555715,0.00044112373,0.000014791894,0.0004326395],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99797565,0.00035507802,0.0005864686,0.0004645023,0.000017778735,0.0006005368],"domain_scores_gemma":[0.99926883,0.00017437167,0.00012528652,0.00036986626,0.0000427043,0.000018930563],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00029846912,0.00021539828,0.00062402256,0.0015220903,0.00006144195,0.000011830012,0.0002651154,0.00031844483,0.0014455633],"category_scores_gemma":[0.000023230721,0.0002080541,0.00023830174,0.001158352,0.00045976034,0.000058172373,0.000107111686,0.00029543685,0.00010574327],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010654547,0.00027530044,0.118608505,0.00001164512,0.00033268615,0.0000292136,0.00005841572,0.0010308921,0.8731141,0.000120004435,0.006160913,0.00015178433],"study_design_scores_gemma":[0.0028579198,0.00007434227,0.09674628,0.000051594736,0.0003158869,0.000044124412,0.00009757818,0.000044889137,0.8746675,0.000041614956,0.024567537,0.00049069524],"about_ca_topic_score_codex":0.0041412325,"about_ca_topic_score_gemma":0.0025059066,"teacher_disagreement_score":0.021862224,"about_ca_system_score_codex":0.00009107946,"about_ca_system_score_gemma":0.000048592206,"threshold_uncertainty_score":0.99946725},"labels":[],"label_agreement":null},{"id":"W1748796273","doi":"10.1111/j.1574-6968.2007.00641.x","title":"Conjugative transfer of the Lactococcus lactis sex factor and pRS01 plasmid to Enterococcus faecalis","year":2007,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"RNA and protein synthesis mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Enterococcus faecalis; Lactococcus lactis; Plasmid; Mobile genetic elements; Biology; Genetics; Microbiology; Bacteria; Lactococcus; Enterococcus; Subspecies; Gene; Staphylococcus aureus; Zoology","score_opus":0.007639530350950275,"score_gpt":0.21937661959947374,"score_spread":0.21173708924852347,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1748796273","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9923722,0.00009132415,0.0051096035,0.0013002845,0.0002340416,0.00056871376,0.00020469486,0.000008963089,0.00011016032],"genre_scores_gemma":[0.9948633,0.00001238087,0.00027875407,0.004533077,0.00008055796,0.00002307151,0.0000257474,0.000019703015,0.00016341022],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9989212,0.000118584416,0.00024293127,0.0003520716,0.000044213157,0.00032097177],"domain_scores_gemma":[0.9994997,0.000052194122,0.0000617073,0.00027968507,0.00003187582,0.00007488658],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00018738011,0.0001965451,0.0002164714,0.00004694211,0.00007436891,0.000009225021,0.00024712284,0.0002100751,0.000037958736],"category_scores_gemma":[0.000037295817,0.000142674,0.00010318476,0.00006624355,0.00020590276,0.0000032873804,0.00009481004,0.00010532109,0.000007916071],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014844166,0.000020887484,0.0040483084,0.000009790778,0.00008045589,0.0000024057938,0.0003568392,0.0000018284445,0.9928266,0.000016590722,0.0011216386,0.0013662169],"study_design_scores_gemma":[0.00040310383,0.00017446844,0.0047033736,0.000016581369,0.000013203822,0.000026732509,0.00006984123,1.2029466e-7,0.95775175,0.000006180979,0.03667098,0.00016367312],"about_ca_topic_score_codex":0.000030455256,"about_ca_topic_score_gemma":0.0000710412,"teacher_disagreement_score":0.035549343,"about_ca_system_score_codex":0.000013940709,"about_ca_system_score_gemma":0.000017542507,"threshold_uncertainty_score":0.58180773},"labels":[],"label_agreement":null},{"id":"W1749673944","doi":"10.1111/j.1574-6968.2011.02295.x","title":"The olsA gene mediates the synthesis of an ornithine lipid in Pseudomonas aeruginosa during growth under phosphate-limiting conditions, but is not involved in antimicrobial peptide susceptibility","year":2011,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Antimicrobial Peptides and Activities","field":"Immunology and Microbiology","cited_by":51,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute for Biological Sciences; University of British Columbia; Health Sciences Centre; University of Calgary","funders":"Canadian Institutes of Health Research","keywords":"Pseudomonas aeruginosa; Virulence; Biology; Phosphate; Mutant; Biochemistry; Ornithine; Complementation; Antimicrobial; Microbiology; Bacteria; Gene; Genetics; Amino acid; Arginine","score_opus":0.016095057004722968,"score_gpt":0.21100785574018407,"score_spread":0.1949127987354611,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1749673944","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9941316,0.00025944103,0.000012479053,0.0038307284,0.0006631581,0.00054928986,0.00045080137,0.00006323109,0.000039218467],"genre_scores_gemma":[0.9960265,0.0003377167,0.0001936636,0.0029582637,0.00008632022,0.000056285477,0.00021388738,0.000046903268,0.00008046698],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9962323,0.00093407126,0.0010338112,0.000744391,0.000040885454,0.0010145972],"domain_scores_gemma":[0.99767274,0.0010185566,0.00051736244,0.000656508,0.00009781157,0.000036996615],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0010482717,0.0004976005,0.000746291,0.00024377403,0.00058906194,0.00003409408,0.0008796951,0.00046504982,0.00023218307],"category_scores_gemma":[0.00018810535,0.00034983188,0.0002361848,0.0002987884,0.0024884169,0.00027257513,0.00030263484,0.0009262858,0.000083090286],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00057351444,0.00023949226,0.04073001,0.000040512303,0.00017682562,0.000020852278,0.001961948,0.000022071637,0.9548647,0.00009159586,0.0011759828,0.00010250576],"study_design_scores_gemma":[0.0012904541,0.000066939414,0.0834433,0.00011025122,0.000052829124,0.00012917687,0.0021771532,0.0000029802736,0.912205,0.000060594622,0.00007710447,0.00038424163],"about_ca_topic_score_codex":0.003326591,"about_ca_topic_score_gemma":0.0029780779,"teacher_disagreement_score":0.042713292,"about_ca_system_score_codex":0.00012908976,"about_ca_system_score_gemma":0.00009111014,"threshold_uncertainty_score":0.9998954},"labels":[],"label_agreement":null},{"id":"W1750708191","doi":"10.1111/j.1574-6968.2008.01124.x","title":"Scratching the surface of the rare biosphere with ribosomal sequence tag primers","year":2008,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Microbial Community Ecology and Physiology","field":"Environmental Science","cited_by":12,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia; University of Waterloo","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"GenBank; 16S ribosomal RNA; Biology; Phylogenetic tree; Ribosomal RNA; Genetics; Gene; Evolutionary biology; Phylogenetics; Sequence (biology); Computational biology; Sequence analysis; Ribosomal DNA","score_opus":0.012081714772301123,"score_gpt":0.18987700868786883,"score_spread":0.1777952939155677,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1750708191","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9932256,0.0000383224,0.000030031995,0.005778195,0.00019381457,0.0002516331,0.000030712712,0.00002044136,0.00043125293],"genre_scores_gemma":[0.99178636,0.0000105666195,0.0005431212,0.007388269,0.000018090543,0.0000037725706,0.000024060131,0.00001183267,0.00021395144],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99862105,0.0005338667,0.00019062545,0.00025493826,0.000044036176,0.00035549552],"domain_scores_gemma":[0.9990565,0.00017659459,0.00017649519,0.00055346015,0.000008508,0.000028396047],"candidate_categories":["sts","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00018057406,0.00017922372,0.00020756166,0.000007930456,0.0006957855,0.000003882586,0.00094042707,0.0001309541,0.0009936676],"category_scores_gemma":[0.000015692798,0.00009667817,0.000080769714,0.00021674785,0.003250791,0.00007144164,0.00041193765,0.00056456315,0.00013398787],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00004021782,0.000025470123,0.06683469,0.00000248512,0.00003132249,0.0000062973313,0.00081276527,0.0028348593,0.91614014,0.000014319311,0.013232417,0.000025008929],"study_design_scores_gemma":[0.001977244,0.0005490075,0.49192473,0.00008586621,0.00010695095,0.0022248966,0.0007673332,0.000067051835,0.43754354,0.00016493889,0.063440934,0.0011474796],"about_ca_topic_score_codex":0.0009806136,"about_ca_topic_score_gemma":0.0010513788,"teacher_disagreement_score":0.4785966,"about_ca_system_score_codex":0.000063026884,"about_ca_system_score_gemma":0.000033310203,"threshold_uncertainty_score":0.99991953},"labels":[],"label_agreement":null},{"id":"W1800523728","doi":"10.1111/j.1574-6968.2010.02088.x","title":"Growth-phase-dependent expression of the operon coding for the glycosylated autotransporter adhesin AIDA-I of pathogenic Escherichia coli","year":2010,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Bacteriophages and microbial interactions","field":"Environmental Science","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal","funders":"Canadian Institutes of Health Research","keywords":"Operon; Biology; Escherichia coli; Gene; Molecular biology; Promoter; Gene expression; Repressor; Bacterial adhesin; Transcription (linguistics); Genetics","score_opus":0.008119532205257275,"score_gpt":0.22503993197809583,"score_spread":0.21692039977283856,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1800523728","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9958623,0.00001782427,0.00085274805,0.0015477549,0.000977006,0.0005081809,0.00018849305,0.00001534157,0.000030355284],"genre_scores_gemma":[0.9981789,0.000009233391,0.0005659953,0.0009977822,0.000038579718,0.000029383506,0.000025839232,0.00001810806,0.00013616003],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9990647,0.00006353994,0.00033156382,0.0002489934,0.000043370917,0.00024785488],"domain_scores_gemma":[0.9992688,0.00010766482,0.00024156243,0.0003372317,0.000016135153,0.00002865861],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00019501398,0.00015073558,0.00018975919,0.000019622921,0.00018259638,0.000010099949,0.00047382116,0.00013411634,0.00074197043],"category_scores_gemma":[0.00001961338,0.00008878585,0.0001808588,0.000096674084,0.00044818336,0.00008357933,0.000117897456,0.00028835164,0.000020520403],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008222057,0.00008572895,0.00079817505,0.000008275886,0.000023857663,7.0906907e-7,0.00028881745,0.000031533444,0.9961989,0.0000072079047,0.0022117342,0.00026283885],"study_design_scores_gemma":[0.0006729663,0.00006208905,0.022247475,0.000023297956,0.0000504144,0.000017905657,0.000032909393,0.000034281908,0.9701189,0.000003229341,0.0066282875,0.0001082532],"about_ca_topic_score_codex":0.0002709917,"about_ca_topic_score_gemma":0.0002441962,"teacher_disagreement_score":0.02608001,"about_ca_system_score_codex":0.000032771026,"about_ca_system_score_gemma":0.0000109750235,"threshold_uncertainty_score":0.8124056},"labels":[],"label_agreement":null},{"id":"W1802895072","doi":"10.1016/j.femsle.2005.07.040","title":"<i>Sclerotinia sclerotiorum</i>: When âto be or not to beâ a pathogen?","year":2005,"lang":"sah","type":"review","venue":"FEMS Microbiology Letters","topic":"Plant pathogens and resistance mechanisms","field":"Agricultural and Biological Sciences","cited_by":210,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Agriculture and Agri-Food Canada","funders":"","keywords":"Sclerotinia sclerotiorum; Biology; Pathogen; Microbiology; Enzyme; Oxalic acid; Botrytis cinerea; Mycelium; Secretion; Sclerotinia; Proteases; Host (biology); Biochemistry; Botany; Ecology","score_opus":0.056971644282675704,"score_gpt":0.26385098363437154,"score_spread":0.20687933935169583,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1802895072","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.33951023,0.4896197,0.00014365104,0.09183709,0.010999844,0.01298356,0.05356689,0.0008786706,0.00046036317],"genre_scores_gemma":[0.0028613822,0.82443815,0.005188123,0.13449608,0.008468927,0.0007144684,0.0093192635,0.00009671222,0.014416921],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9920278,0.00083231943,0.0018056344,0.0025918488,0.00030570713,0.0024366702],"domain_scores_gemma":[0.9971425,0.0005092927,0.0009513809,0.00057895307,0.00013663844,0.0006812675],"candidate_categories":["metaepi_narrow","research_integrity","insufficient_payload"],"consensus_categories":["metaepi_narrow","insufficient_payload"],"category_scores_codex":[0.0010700515,0.0017855181,0.0031190487,0.00018837124,0.00089427247,0.00026075577,0.002272379,0.0017012309,0.004642286],"category_scores_gemma":[0.0001112813,0.00075293164,0.0013475958,0.0008801673,0.00041236862,0.00014228476,0.0007456259,0.001214056,0.002886215],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00018862875,0.00016204212,0.000018611536,0.00026269525,0.00018815063,0.00020984282,0.00015591613,0.000002847692,0.79794383,0.000021552172,0.050031725,0.15081416],"study_design_scores_gemma":[0.0003901158,0.0006662988,0.0003138824,0.0030232095,0.00043296718,0.0006530204,0.00010296916,6.072363e-7,0.0013819954,0.0000029879668,0.99121445,0.0018174854],"about_ca_topic_score_codex":0.000097554584,"about_ca_topic_score_gemma":0.0018985854,"teacher_disagreement_score":0.94118273,"about_ca_system_score_codex":0.00028282093,"about_ca_system_score_gemma":0.00012159143,"threshold_uncertainty_score":0.99959475},"labels":[],"label_agreement":null},{"id":"W1803082143","doi":"10.1111/j.1574-6968.2011.02324.x","title":"Harvesting of novel polyhydroxyalkanaote (PHA) synthase encoding genes from a soil metagenome library using phenotypic screening","year":2011,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"biodegradable polymer synthesis and properties","field":"Materials Science","cited_by":38,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; University of Waterloo","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Complementation; Cosmid; Biology; Gene; Metagenomics; Sinorhizobium meliloti; Genetics; Mutant; Genomic library; Computational biology; Phenotype; Phenotypic screening; Peptide sequence","score_opus":0.07332481721361526,"score_gpt":0.2179577998309847,"score_spread":0.14463298261736945,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1803082143","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9800376,0.009583774,0.008899958,0.00023340901,0.0005361936,0.00011047231,0.00032360372,0.00011504185,0.00015990998],"genre_scores_gemma":[0.9147559,0.00001877715,0.08383427,0.001074054,0.0001678695,0.0000072343164,0.000030330284,0.000048913727,0.00006264697],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9980578,0.00019894127,0.0005558959,0.00055533083,0.00007156522,0.0005605051],"domain_scores_gemma":[0.99893796,0.00015946533,0.0003873358,0.00040801064,0.000019294084,0.00008795325],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00030706587,0.0003150395,0.0005319718,0.00016771618,0.0002661404,0.000061016017,0.0005702527,0.00016054875,0.0008311068],"category_scores_gemma":[0.000034423243,0.00026559093,0.00014658085,0.000152431,0.00045462677,0.00048746765,0.0002749366,0.00015629944,0.00003271617],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008590799,0.000052243486,0.0016986179,0.00002047262,0.00008742039,0.000011698076,0.00087224744,0.00003326548,0.9943957,0.000020640433,0.00004638103,0.0026754374],"study_design_scores_gemma":[0.00030874554,0.00002987015,0.00028337646,0.0001314976,0.00009571252,0.000030670908,0.00013072827,0.00041324322,0.9979011,0.000008502343,0.0003343365,0.00033224848],"about_ca_topic_score_codex":0.0053696004,"about_ca_topic_score_gemma":0.000032167118,"teacher_disagreement_score":0.07493431,"about_ca_system_score_codex":0.000017565319,"about_ca_system_score_gemma":0.000050063503,"threshold_uncertainty_score":0.9999796},"labels":[],"label_agreement":null},{"id":"W1835124919","doi":"10.1111/j.1574-6968.2010.02076.x","title":"Identification of putative two-component regulatory systems in the bovine pathogen Mannheimia haemolytica A1, and preliminary characterization of the NarQ/P system","year":2010,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Bacterial Genetics and Biotechnology","field":"Biochemistry, Genetics and Molecular Biology","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"Fonds De La Recherche Scientifique - FNRS","keywords":"Biology; Mutant; Periplasmic space; Two-component regulatory system; Response regulator; Gene; In silico; Pathogen; Genetics; Sequence analysis; Molecular biology; Gene expression; Escherichia coli","score_opus":0.003684958682046909,"score_gpt":0.19029074573097304,"score_spread":0.18660578704892614,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1835124919","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99740416,0.00013496549,0.000107303866,0.0011189993,0.0005705866,0.0004920609,0.0001616551,0.000005564182,0.0000047152],"genre_scores_gemma":[0.99937344,0.00001564039,0.00003905442,0.00015276925,0.00008536069,0.000027883312,0.00028037312,0.000011398981,0.000014095634],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99891126,0.00021114196,0.0004085586,0.00027107375,0.000043132783,0.00015486004],"domain_scores_gemma":[0.9990949,0.000016523898,0.00036708542,0.00045310808,0.000054088596,0.000014272682],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00038806564,0.00013179576,0.00019004368,0.000056454268,0.00005163212,0.0000117459185,0.00032728695,0.000246095,6.2330133e-7],"category_scores_gemma":[0.000020084017,0.000087471206,0.00005150547,0.000090273425,0.0004283783,0.0000032800774,0.00013369184,0.00015280161,8.483852e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008314296,0.00003348696,0.0015244201,0.00004900122,0.000031160675,0.0000013326005,0.00014291209,0.00000946047,0.9976945,0.0001962249,0.000030626026,0.00020371904],"study_design_scores_gemma":[0.00036900147,0.00014402649,0.0705746,0.00002791509,0.00002953012,0.00015452612,0.00013517914,0.00007502109,0.9274971,0.0000029014534,0.00088598725,0.000104256156],"about_ca_topic_score_codex":0.000023645443,"about_ca_topic_score_gemma":0.000008778089,"teacher_disagreement_score":0.070197456,"about_ca_system_score_codex":0.00000968971,"about_ca_system_score_gemma":0.00002336362,"threshold_uncertainty_score":0.35669723},"labels":[],"label_agreement":null},{"id":"W1861531665","doi":"10.1111/j.1574-6968.2011.02264.x","title":"Flagella and pili are both necessary for efficient attachment of Methanococcus maripaludis to surfaces","year":2011,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Micro and Nano Robotics","field":"Physics and Astronomy","cited_by":85,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Queen's University","funders":"Biotechnology and Biological Sciences Research Council; Leverhulme Trust; Cancer Research UK","keywords":"Pilus; Flagellum; Methanococcus; Cell biology; Biophysics; Mutant; Appendage; Biology; Microbiology; Chemistry; Archaea; Gene; Biochemistry; Anatomy; Virulence","score_opus":0.02076167224065741,"score_gpt":0.24318249431132694,"score_spread":0.22242082207066952,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1861531665","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98925865,0.00018373926,0.008904675,0.00048542794,0.0002716219,0.000465802,0.00020247881,0.000013006678,0.00021459347],"genre_scores_gemma":[0.9943754,0.000002466551,0.0046878015,0.0006258912,0.000060715116,0.000024900613,0.000044045857,0.000017089102,0.00016165637],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99904513,0.000050356844,0.0002487151,0.0003125508,0.0000236829,0.000319536],"domain_scores_gemma":[0.9994756,0.00007048804,0.00015069239,0.0002048782,0.00003026317,0.00006806732],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001565743,0.00018258078,0.00031577758,0.00007435556,0.000072894705,0.000007919088,0.00016614105,0.000055484714,0.0001195953],"category_scores_gemma":[0.0000028394381,0.00015952552,0.00009149165,0.00007604257,0.00012122546,0.00001756189,0.0001048687,0.00007554689,0.000014181354],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006353166,0.000105220846,0.06313468,0.000038248705,0.00012025852,8.3901415e-7,0.00063708256,0.00025349887,0.9267362,0.00017143636,0.008375154,0.00036389162],"study_design_scores_gemma":[0.0023718774,0.00038390944,0.040866606,0.00013384406,0.0002043942,0.0000049610053,0.0008847679,0.00009607091,0.94336253,0.00021995122,0.010684887,0.0007861942],"about_ca_topic_score_codex":0.00012971519,"about_ca_topic_score_gemma":0.0000060640864,"teacher_disagreement_score":0.02226807,"about_ca_system_score_codex":0.000014247291,"about_ca_system_score_gemma":0.000014756239,"threshold_uncertainty_score":0.65052617},"labels":[],"label_agreement":null},{"id":"W1861833923","doi":"10.1111/j.1574-6968.2006.00623.x","title":"Presence of a novel 16Sâ23S rRNA gene intergenic spacer insert in Bradyrhizobium canariense strains","year":2007,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Legume Nitrogen Fixing Symbiosis","field":"Agricultural and Biological Sciences","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Waterloo","funders":"Russian Foundation for Basic Research","keywords":"Biology; Amplified fragment length polymorphism; Intergenic region; Bradyrhizobium; Genetics; 16S ribosomal RNA; Restriction fragment length polymorphism; Gene cluster; Spacer DNA; Gene; Ribosomal RNA; Botany; Rhizobium; Internal transcribed spacer; Genotype; Genome; Genetic diversity; Population","score_opus":0.01406149485023231,"score_gpt":0.21282591123756409,"score_spread":0.19876441638733178,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1861833923","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9952095,0.00009125022,0.000022417375,0.0038019773,0.0003825419,0.000240737,0.00014401104,0.000042369382,0.000065181026],"genre_scores_gemma":[0.99655133,0.0000028163347,0.00052396965,0.0026039672,0.00012984032,0.0000067786405,0.000098735116,0.000002974084,0.00007960565],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99828863,0.00007986107,0.00044812742,0.00045752848,0.00007431568,0.00065152394],"domain_scores_gemma":[0.9993578,0.00019356329,0.00018048505,0.00012758316,0.00004772165,0.00009284707],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004652028,0.00022553046,0.00031147315,0.000067809284,0.000063398395,0.000012780218,0.0004288766,0.00021332043,0.00014639694],"category_scores_gemma":[0.00007474891,0.00010943772,0.00013429314,0.00049081794,0.0002814111,0.0000847435,0.00013969767,0.0002705574,0.000023230072],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00005272587,0.00012433142,0.032676883,0.0000042888214,0.00003208024,0.000023450904,0.00032105698,0.0000011699266,0.9649449,0.000019776713,0.0013767633,0.00042259207],"study_design_scores_gemma":[0.00052035257,0.0001640589,0.20388389,0.00003568951,0.0000132433,0.00010860811,0.00019373238,0.0000049365685,0.79348767,0.0000074189093,0.0012517556,0.00032867168],"about_ca_topic_score_codex":0.004127383,"about_ca_topic_score_gemma":0.015695857,"teacher_disagreement_score":0.17145723,"about_ca_system_score_codex":0.00009421945,"about_ca_system_score_gemma":0.000018586716,"threshold_uncertainty_score":0.87586564},"labels":[],"label_agreement":null},{"id":"W1869853393","doi":"10.1111/j.1574-6968.2011.02228.x","title":"Maintaining network security: how macromolecular structures cross the peptidoglycan layer","year":2011,"lang":"en","type":"review","venue":"FEMS Microbiology Letters","topic":"Bacterial Genetics and Biotechnology","field":"Biochemistry, Genetics and Molecular Biology","cited_by":92,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University; Health Sciences Centre","funders":"Canadian Institutes of Health Research; Advanced Foods and Materials Network","keywords":"Peptidoglycan; Cell envelope; FtsZ; Bacterial cell structure; Cell wall; Cell biology; Macromolecule; Biochemistry; Biology; Structural biology; Lytic cycle; Cell division; Biophysics; Chemistry; Cell; Bacteria","score_opus":0.017754920166154764,"score_gpt":0.25985220916713325,"score_spread":0.2420972890009785,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1869853393","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.012007617,0.983812,0.00012128415,0.000894834,0.0018703544,0.00085904694,0.00029562754,0.00005043384,0.00008880208],"genre_scores_gemma":[0.0040049106,0.9869288,0.0005474083,0.0033385549,0.0026110306,0.000113391885,0.0020629598,0.00017304324,0.00021989204],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9965453,0.0005228343,0.00055161933,0.0011900592,0.00005621691,0.001133985],"domain_scores_gemma":[0.99788207,0.000033024276,0.0005792252,0.0013435243,0.00006241665,0.00009974381],"candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.0003943603,0.00089718145,0.0012225208,0.000098200515,0.0002969805,0.00014055833,0.001543086,0.0019947372,0.00006892573],"category_scores_gemma":[0.000044232384,0.0006169982,0.0007557778,0.0002014907,0.0010433864,0.0000029938014,0.0009777958,0.000988617,0.000043810818],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001553449,0.000076886055,0.00008364721,0.0015085562,0.0036375104,0.00019816149,0.00019379554,0.000021277856,0.66896755,0.00092682766,0.103445075,0.22078536],"study_design_scores_gemma":[0.0002266882,0.00016896833,0.0000066483794,0.00027183144,0.00029767663,0.00060751813,0.000012140419,2.2464295e-7,0.0037856672,0.00011277996,0.9937745,0.00073537935],"about_ca_topic_score_codex":0.000020551084,"about_ca_topic_score_gemma":0.000043100154,"teacher_disagreement_score":0.8903294,"about_ca_system_score_codex":0.00004366129,"about_ca_system_score_gemma":0.00014736954,"threshold_uncertainty_score":0.9996281},"labels":[],"label_agreement":null},{"id":"W1873124370","doi":"10.1111/j.1574-6968.2010.01954.x","title":"Characterization of  two aerobic ultramicrobacteria isolated from urban soil and a description of Oxalicibacterium solurbis sp. nov.","year":2010,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Microbial Community Ecology and Physiology","field":"Environmental Science","cited_by":34,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"","keywords":"Characterization (materials science); Biology; Environmental science; Materials science; Nanotechnology","score_opus":0.006698427808251404,"score_gpt":0.187716935894381,"score_spread":0.18101850808612957,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1873124370","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99821746,0.0000049663804,0.00021858119,0.00042048818,0.0006516856,0.00021310712,0.00021145625,0.000027889893,0.000034334043],"genre_scores_gemma":[0.9967795,0.000012345288,0.00046412338,0.0011914783,0.000053117936,0.0000057426114,0.0014387972,0.00001851131,0.000036402023],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9986129,0.00026682756,0.00043804568,0.00034506636,0.000025057212,0.00031211923],"domain_scores_gemma":[0.99907404,0.000077423094,0.0003845491,0.00039388624,0.000019038727,0.000051039322],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0001917254,0.00022237486,0.00040628717,0.0000715791,0.00011463727,0.0000104267365,0.0003297069,0.00029475818,0.0020086416],"category_scores_gemma":[0.000016974658,0.00022336186,0.00007036162,0.00013767787,0.0010626753,0.00017125721,0.0002319617,0.0004200164,0.0000681772],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000118136726,0.000088800516,0.059723876,0.000008635749,0.000043294353,0.0000010649484,0.0007094558,0.000004977735,0.938458,0.0000071456075,0.0007399401,0.00009661523],"study_design_scores_gemma":[0.0007538644,0.00011830813,0.3153409,0.000015985057,0.000040886265,0.000038863447,0.000012012594,0.000023427712,0.6816217,0.000036701862,0.0017578241,0.00023957391],"about_ca_topic_score_codex":0.0019622506,"about_ca_topic_score_gemma":0.002717225,"teacher_disagreement_score":0.25683638,"about_ca_system_score_codex":0.000028699493,"about_ca_system_score_gemma":0.00001073448,"threshold_uncertainty_score":0.99890363},"labels":[],"label_agreement":null},{"id":"W1886644559","doi":"10.1111/j.1574-6968.2008.01166.x","title":"Interaction of enterohemorrhagic Escherichia coli O157:H7 with mouse intestinal mucosa","year":2008,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Escherichia coli research studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":10,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Biotechnology and Biological Sciences Research Council; Natural Sciences and Engineering Research Council of Canada; Royal Society; Department for Environment, Food and Rural Affairs, UK Government","keywords":"Escherichia coli; Biology; Secretion; Microbiology; Intestinal mucosa; Epithelium; Enterobacteriaceae; Intestinal epithelium; Effector; Signal transducing adaptor protein; Bacteria; Lumen (anatomy); Virulence; Molecular biology; Cell biology; Biochemistry; Gene; Signal transduction; Medicine; Genetics","score_opus":0.01256439497117271,"score_gpt":0.23697537111852146,"score_spread":0.22441097614734876,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1886644559","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9973528,0.00018748078,0.0011296982,0.0006263706,0.00014063939,0.00023038118,0.000024753825,0.00002418401,0.00028368653],"genre_scores_gemma":[0.99403036,0.00010833233,0.0036414808,0.001457123,0.0001336492,0.000041228745,0.00016428834,0.000029444225,0.00039408234],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99872607,0.00013967861,0.00025676342,0.00041847496,0.00006685704,0.00039213145],"domain_scores_gemma":[0.9992692,0.000036409903,0.00016525689,0.00033182185,0.00013159624,0.00006572285],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000116356736,0.0002370498,0.00027517584,0.00007885544,0.00011605482,0.000006647821,0.00026612487,0.0001177625,0.00002585668],"category_scores_gemma":[0.000095954674,0.00019818205,0.00009130653,0.00013694713,0.00066237705,0.000007346575,0.00020126541,0.00025795042,0.000019834648],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00039492844,0.00010184811,0.02084902,0.000021435679,0.00016103486,0.000028457811,0.00011349058,0.000039007613,0.9694188,0.0000035382072,0.008799678,0.000068737696],"study_design_scores_gemma":[0.00111056,0.0009099618,0.007067941,0.000030210353,0.000022534257,0.00045097858,0.0001166716,0.000020619535,0.97535783,9.212922e-7,0.014609089,0.0003026552],"about_ca_topic_score_codex":0.0000675044,"about_ca_topic_score_gemma":0.000059078193,"teacher_disagreement_score":0.013781078,"about_ca_system_score_codex":0.00003527211,"about_ca_system_score_gemma":0.000068277324,"threshold_uncertainty_score":0.808163},"labels":[],"label_agreement":null},{"id":"W1896232177","doi":"10.1111/j.1574-6968.2010.02107.x","title":"mutL as a genetic switch of bacterial mutability: turned on or off through repeat copy number changes","year":2010,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Bacterial Genetics and Biotechnology","field":"Biochemistry, Genetics and Molecular Biology","cited_by":17,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"Canadian Institutes of Health Research","keywords":"Biology; DNA mismatch repair; Genetics; Population; Mutation Accumulation; Mutation; DNA repair; Gene; Genome; Medicine","score_opus":0.00764024617075081,"score_gpt":0.23866173224218315,"score_spread":0.23102148607143233,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1896232177","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99406946,0.00006119465,0.000029418687,0.0032562877,0.0017947609,0.00038965832,0.00015324361,0.000033538916,0.00021241073],"genre_scores_gemma":[0.99224395,0.00019965677,0.0022945842,0.003687951,0.0008131595,0.000037886795,0.0004359106,0.000049011654,0.0002379179],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9980683,0.000115477174,0.0003967476,0.0007896638,0.000058290352,0.0005715403],"domain_scores_gemma":[0.99867415,0.00003300564,0.00023750331,0.000905271,0.00008148005,0.00006859058],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0001690046,0.0003602866,0.000432852,0.000055497316,0.00008449376,0.000019878542,0.00048738107,0.0009330688,0.00067513215],"category_scores_gemma":[0.00011725969,0.00028925942,0.00014259007,0.00011846149,0.00065619993,0.0000030545225,0.00027647518,0.0003494643,0.00009138848],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00089796406,0.0001181524,0.0011152221,0.00001707075,0.000112077236,0.00001596636,0.000077020966,9.965954e-7,0.9909948,0.000027307433,0.0037952098,0.002828214],"study_design_scores_gemma":[0.0008565269,0.00081933,0.0008995443,0.0000102549475,0.000028337397,0.00029090993,0.000019419675,4.1847971e-7,0.77920675,0.000028171431,0.21755826,0.0002820504],"about_ca_topic_score_codex":0.00007841975,"about_ca_topic_score_gemma":0.0005266783,"teacher_disagreement_score":0.21376306,"about_ca_system_score_codex":0.00001424467,"about_ca_system_score_gemma":0.000083914085,"threshold_uncertainty_score":0.99995595},"labels":[],"label_agreement":null},{"id":"W1896269736","doi":"10.1111/j.1574-6968.2011.02277.x","title":"Effects of nitrite on ammonia-oxidizing activity and gene regulation in three ammonia-oxidizing bacteria","year":2011,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Wastewater Treatment and Nitrogen Removal","field":"Environmental Science","cited_by":80,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"University of Alberta","keywords":"Nitrite; Nitrosomonas europaea; Nitrite reductase; Nitrosomonas; Ammonia monooxygenase; Ammonia; Nitric oxide; Bacteria; Biochemistry; Nitrification; Cytochrome; Chemistry; Biology; Microbiology; Food science; Nitrate; Enzyme; Gene; Organic chemistry","score_opus":0.01104596966004028,"score_gpt":0.18310005815307995,"score_spread":0.17205408849303966,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1896269736","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9992038,0.000035883066,0.00005531562,0.0001114157,0.00013712521,0.0004048495,0.0000060331295,0.000024608855,0.000020945037],"genre_scores_gemma":[0.9791923,0.000008073961,0.02053277,0.0001757323,0.000027032993,0.000018613899,0.000012683811,0.00001715827,0.000015613115],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99890935,0.00012578747,0.0001938739,0.0003888384,0.000048747374,0.00033341203],"domain_scores_gemma":[0.9995662,0.0000693783,0.00012958529,0.00018483322,0.0000028188135,0.000047205565],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014764829,0.00021011899,0.00025936557,0.00009509648,0.00006570914,0.000008554187,0.00013076297,0.00012516888,0.00004202051],"category_scores_gemma":[0.000007385393,0.00018555198,0.000056286877,0.00012093611,0.00024389745,0.00014315963,0.00012637854,0.00012826259,0.00005699724],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001976607,0.0001079514,0.035126824,0.000012702729,0.000027442391,0.00003079459,0.00034770794,0.0000071567756,0.96289575,0.0000026311784,0.000036899582,0.0012064954],"study_design_scores_gemma":[0.0006202283,0.00008472978,0.38000315,0.000025308236,0.000013907623,0.000017736924,0.0000030012418,0.0000065735962,0.61905384,0.000029008554,0.000032007145,0.00011052503],"about_ca_topic_score_codex":0.0009986918,"about_ca_topic_score_gemma":0.0003975241,"teacher_disagreement_score":0.34487632,"about_ca_system_score_codex":0.00011068114,"about_ca_system_score_gemma":0.0000032595071,"threshold_uncertainty_score":0.75665903},"labels":[],"label_agreement":null},{"id":"W1897020877","doi":"10.1111/j.1574-6968.2008.01088.x","title":"Characterization of the NleF effector protein from attaching and effacing bacterial pathogens","year":2008,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Escherichia coli research studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":32,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canada's Michael Smith Genome Sciences Centre; McGill University; University of British Columbia","funders":"National Institute of Allergy and Infectious Diseases; National Institutes of Health; University of British Columbia; South Dakota State University; Howard Hughes Medical Institute","keywords":"Effector; Biology; Virulence; Secretion; Microbiology; Type three secretion system; Enterocyte; Citrobacter rodentium; Escherichia coli; Enteropathogenic Escherichia coli; Shigella; Pathogen; Cell biology; Gene; Small intestine","score_opus":0.007326688075025643,"score_gpt":0.20763417573535536,"score_spread":0.2003074876603297,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1897020877","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9985477,0.00008829662,0.0001745066,0.00046549703,0.0001828878,0.00034867055,0.00017687354,0.000007454888,0.000008117581],"genre_scores_gemma":[0.9987699,0.000035650017,0.00022834925,0.00040328715,0.00020611472,0.00002832321,0.00027666692,0.000013958661,0.000037752096],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99911064,0.00023128818,0.0001555104,0.0002656488,0.00003561621,0.00020130261],"domain_scores_gemma":[0.99960357,0.00002185104,0.00010289276,0.0002182716,0.000027871627,0.000025523517],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001075456,0.00012951547,0.00016262874,0.000021023361,0.0001590042,0.000006607788,0.00014723944,0.00010602201,0.0000068459617],"category_scores_gemma":[0.000095123345,0.00009567317,0.00006091114,0.00004846206,0.00030179825,0.0000036289032,0.00024340233,0.00011254151,0.0000026186297],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006027407,0.000013153887,0.023254247,0.0000113710985,0.00006508763,0.0000021230749,0.000145564,9.111705e-7,0.9762261,6.7348196e-7,0.000121355864,0.000099172314],"study_design_scores_gemma":[0.00037434415,0.0000612273,0.117299624,0.000021278922,0.000008083557,0.000015054633,0.00000543079,0.0000025751178,0.87927085,5.2620607e-7,0.0028404081,0.00010057584],"about_ca_topic_score_codex":0.000044815904,"about_ca_topic_score_gemma":0.000018192948,"teacher_disagreement_score":0.096955195,"about_ca_system_score_codex":0.0000124038515,"about_ca_system_score_gemma":0.000027207476,"threshold_uncertainty_score":0.39014384},"labels":[],"label_agreement":null},{"id":"W1908523536","doi":"10.1111/j.1574-6968.2010.01982.x","title":"Characterization of swarming motility in Rhizobium leguminosarum bv. viciae","year":2010,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Legume Nitrogen Fixing Symbiosis","field":"Agricultural and Biological Sciences","cited_by":33,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Regina; University of Calgary","funders":"","keywords":"Swarming (honey bee); Motility; Biology; Swarming motility; Microbiology; Rhizobium leguminosarum; Cell biology; Bacteria; Rhizobiaceae; Biofilm; Symbiosis; Quorum sensing; Genetics","score_opus":0.006666718677572297,"score_gpt":0.18657470429367262,"score_spread":0.17990798561610033,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1908523536","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99517214,0.000005675454,0.0000014346138,0.003921888,0.0005349502,0.0001835078,0.00009920735,0.00004411475,0.000037081678],"genre_scores_gemma":[0.9978487,0.0000010350203,0.000087854176,0.0015490069,0.00015607917,0.000009170912,0.00032530606,0.0000015626076,0.00002129131],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9988479,0.00009926733,0.00032907014,0.00033606577,0.000044031713,0.00034368748],"domain_scores_gemma":[0.9995731,0.00009338107,0.00016277804,0.00009480517,0.00003574922,0.00004015266],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00026731734,0.00015457913,0.00024355204,0.000035478017,0.00006376913,0.000012748513,0.00030161333,0.00020861771,0.00020513988],"category_scores_gemma":[0.000043233635,0.00007403082,0.00008989873,0.00026631972,0.0001710807,0.000103620434,0.00007922101,0.00028958725,0.000046426154],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000011180002,0.00005042639,0.14745016,0.0000037557604,0.0000070369633,0.000002365547,0.00007439201,3.840844e-8,0.85115325,0.000010570449,0.000063626496,0.0011731905],"study_design_scores_gemma":[0.00008527779,0.00002418123,0.41438755,0.000007003077,0.0000036664712,0.0000097091415,0.000011866564,0.0000011879692,0.5845273,0.000006420536,0.0008472529,0.00008853683],"about_ca_topic_score_codex":0.00034013778,"about_ca_topic_score_gemma":0.00083012553,"teacher_disagreement_score":0.2669374,"about_ca_system_score_codex":0.000021109667,"about_ca_system_score_gemma":0.0000065182835,"threshold_uncertainty_score":0.3018889},"labels":[],"label_agreement":null},{"id":"W1911152711","doi":"10.1111/j.1574-6968.2010.01904.x","title":"So similar, yet so different: uncovering distinctive features in the genomes of Salmonella enterica serovars Typhimurium and Typhi","year":2010,"lang":"en","type":"review","venue":"FEMS Microbiology Letters","topic":"Salmonella and Campylobacter epidemiology","field":"Agricultural and Biological Sciences","cited_by":270,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Salmonella enterica; Biology; Serotype; Genome; Virulence; Salmonella; Salmonella typhi; Genetics; Pathogenesis; Pathogen; Microbiology; Gene; Computational biology; Bacteria; Immunology; Escherichia coli","score_opus":0.020004138730917137,"score_gpt":0.24833246470079978,"score_spread":0.22832832596988265,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1911152711","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.3962793,0.60120255,7.6441177e-7,0.0011054222,0.00048641078,0.00050024135,0.00035564724,0.000022421555,0.00004724181],"genre_scores_gemma":[0.03288161,0.9633046,0.000031642012,0.0022213976,0.00038638318,0.00006999493,0.0010481172,0.000008670795,0.000047628462],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99716204,0.000821211,0.0006628996,0.0007168304,0.00006199676,0.00057504437],"domain_scores_gemma":[0.9975906,0.0015924056,0.0005263384,0.00020481767,0.00002369446,0.0000621602],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00041531835,0.0005818232,0.0016751699,0.000057596848,0.00018060763,0.000053370397,0.0007893061,0.00069889316,0.000061048275],"category_scores_gemma":[0.00007562083,0.00019711297,0.00038847397,0.00025957086,0.0007807672,0.00003535222,0.00028671385,0.0009393675,0.00001497095],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009079497,0.00020826884,0.009018772,0.0010695326,0.00034543494,0.00007259634,0.00070849276,0.0000014850418,0.21383336,0.000064861284,0.0048593003,0.7697271],"study_design_scores_gemma":[0.00013799002,0.00014800958,0.022336656,0.0005298388,0.0001771784,0.00028182685,0.00009027085,2.3178048e-7,0.000037850823,0.00007219728,0.9757325,0.00045546165],"about_ca_topic_score_codex":0.00017309956,"about_ca_topic_score_gemma":0.00047385722,"teacher_disagreement_score":0.9708732,"about_ca_system_score_codex":0.000040989566,"about_ca_system_score_gemma":0.000017846338,"threshold_uncertainty_score":0.8038033},"labels":[],"label_agreement":null},{"id":"W1914032873","doi":"10.1111/j.1574-6968.2011.02340.x","title":"Model of the molecular basis for hydroxylamine oxidation and nitrous oxide production in methanotrophic bacteria","year":2011,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Microbial metabolism and enzyme function","field":"Biochemistry, Genetics and Molecular Biology","cited_by":103,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"Natural Sciences and Engineering Research Council of Canada; Joint Genome Institute; University of Louisville; U.S. Department of Energy; Office of Science; National Science Foundation","keywords":"Hydroxylamine; Nitrite; Nitrite reductase; Biochemistry; Ammonia; Bacteria; Chemistry; Rhodobacter; Biology; Enzyme; Gene; Nitrate; Organic chemistry; Nitrate reductase; Genetics","score_opus":0.015712662169658265,"score_gpt":0.1962731373221629,"score_spread":0.18056047515250462,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1914032873","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99493986,0.00016840463,0.0037911362,0.00035224616,0.00036080676,0.00032782773,0.000047396163,0.000005102948,0.0000072045386],"genre_scores_gemma":[0.994677,0.000038289472,0.0043309843,0.0006860948,0.00006923956,0.000035149624,0.00009475222,0.000016400701,0.000052054864],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99922687,0.000083477156,0.00020208769,0.0002987529,0.000017666824,0.00017115616],"domain_scores_gemma":[0.99958354,0.000004941011,0.000113597125,0.00024589384,0.000035621906,0.000016395827],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00017395466,0.00012401404,0.00014848987,0.00005889979,0.000034497523,0.0000024621686,0.00011338129,0.00013328195,0.000002432251],"category_scores_gemma":[0.00007721266,0.00010122817,0.00006347953,0.00006917568,0.00012244776,0.0000060638868,0.000061606486,0.00006171312,7.160463e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015356226,0.000028310547,0.00069303636,0.000018018698,0.000027391296,1.5485725e-7,0.000073633295,0.00019126371,0.99807733,0.000027594428,0.0005571813,0.0001525278],"study_design_scores_gemma":[0.00034011263,0.000043912503,0.0033793964,0.000011650252,0.000031034746,0.000015916148,0.000009832209,0.000035223256,0.9954254,0.000048900376,0.0005498659,0.00010873927],"about_ca_topic_score_codex":0.000064223066,"about_ca_topic_score_gemma":0.000056162975,"teacher_disagreement_score":0.0026863602,"about_ca_system_score_codex":0.000010091989,"about_ca_system_score_gemma":0.00001713328,"threshold_uncertainty_score":0.4127965},"labels":[],"label_agreement":null},{"id":"W1914742631","doi":"10.1111/j.1574-6968.2010.02084.x","title":"Screening, identification and evaluation of potential biocontrol fungal endophytes against Rhizoctonia solani AG3 on potato plants","year":2010,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Plant Disease Resistance and Genetics","field":"Agricultural and Biological Sciences","cited_by":177,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Rhizoctonia solani; Biology; Alternaria solani; Mycelium; Biological pest control; Pathogen; Rhizoctonia; Botany; Phomopsis; Trichoderma; Horticulture; Blight; Microbiology","score_opus":0.0108163620922226,"score_gpt":0.21487102190935292,"score_spread":0.20405465981713033,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1914742631","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99758965,0.00020691114,0.000006031186,0.0010335384,0.000259357,0.00026583503,0.0005889676,0.000020098045,0.000029619012],"genre_scores_gemma":[0.9985799,0.000042727082,0.000041675896,0.00069498783,0.00017388235,0.000013826166,0.0004396007,0.0000011752934,0.0000121763205],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99908006,0.0001121453,0.00020796005,0.00028037725,0.00010447308,0.00021496216],"domain_scores_gemma":[0.9995975,0.000079405196,0.0001502818,0.0000674711,0.000051358264,0.00005397081],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00030658382,0.00012722799,0.00015312238,0.000025391266,0.00011983097,0.00002695909,0.00014036553,0.000114097675,0.000044665445],"category_scores_gemma":[0.000026302254,0.00006134687,0.000058673053,0.00005725387,0.00012333244,0.000041539726,0.000023505148,0.00012514701,0.000017523684],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000811083,0.000035713205,0.005302045,0.0000029168702,0.000029160281,0.0000062856116,0.000017052265,0.000022086995,0.976173,0.000006304864,0.0009191298,0.017405204],"study_design_scores_gemma":[0.0007815108,0.00011186447,0.72387475,0.0000283498,0.00007436626,0.00006802458,0.000060101615,0.00030807775,0.27281746,0.00004909532,0.0015657288,0.00026068275],"about_ca_topic_score_codex":0.000022166056,"about_ca_topic_score_gemma":0.00017103182,"teacher_disagreement_score":0.7185727,"about_ca_system_score_codex":0.0000068600775,"about_ca_system_score_gemma":0.000007691586,"threshold_uncertainty_score":0.25016528},"labels":[],"label_agreement":null},{"id":"W1917854025","doi":"10.1111/j.1574-6968.2011.02351.x","title":"Induction of trap formation in nematode-trapping fungi by a bacterium","year":2011,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Nematode management and characterization studies","field":"Agricultural and Biological Sciences","cited_by":29,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Natural Science Foundation of Yunnan Province; National Natural Science Foundation of China; McMaster University","keywords":"Bacteria; Hypha; Biology; Microbiology; Nematode; Mycelium; Conidium; Microbiological culture; Bacterial cell structure; Botany; Ecology","score_opus":0.02578846821925623,"score_gpt":0.18768152270743405,"score_spread":0.1618930544881778,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1917854025","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9983415,0.000053711497,0.000056802826,0.00096843694,0.00013076012,0.00014672475,0.000019770756,0.000027715385,0.00025459434],"genre_scores_gemma":[0.99891955,0.000041240484,0.000026945092,0.00071629975,0.000028547425,0.000013980061,0.00021958629,7.226555e-7,0.0000331304],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9993507,0.00005073699,0.00026203215,0.00014586617,0.000025345124,0.00016528335],"domain_scores_gemma":[0.99977505,0.000017510258,0.00014476338,0.00003184484,0.000016898006,0.000013933649],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000091681,0.000094786934,0.00015799997,0.000030889343,0.000048502272,0.0000073108727,0.00010578384,0.00006173258,0.00015423883],"category_scores_gemma":[0.0000030754884,0.000044463068,0.00004399178,0.00019079696,0.000058402544,0.00016513454,0.000035317375,0.000059989226,0.000015472891],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000017976876,0.000034772962,0.0045372113,0.000009853785,0.00001122543,8.8696135e-7,0.00046584627,1.983173e-7,0.9904592,0.000022493205,0.0023344143,0.0021059043],"study_design_scores_gemma":[0.0005084811,0.00014832699,0.36028457,0.000072264156,0.000020646297,0.000025529675,0.0014647822,0.000006978409,0.6243534,0.000050030976,0.012682185,0.00038278886],"about_ca_topic_score_codex":0.00005693087,"about_ca_topic_score_gemma":0.000064695385,"teacher_disagreement_score":0.3661058,"about_ca_system_score_codex":0.000010909445,"about_ca_system_score_gemma":6.1082875e-7,"threshold_uncertainty_score":0.18131514},"labels":[],"label_agreement":null},{"id":"W1918630801","doi":"10.1111/j.1574-6968.2010.02064.x","title":"The F plasmid transfer activator TraJ is a dimeric helix-turn-helix DNA-binding protein","year":2010,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Bacterial Genetics and Biotechnology","field":"Biochemistry, Genetics and Molecular Biology","cited_by":17,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"Canadian Institutes of Health Research","keywords":"Plasmid; Biology; DNA; Bacterial conjugation; Molecular biology; DNA-binding protein; Psychological repression; Binding site; Operon; Chromatin immunoprecipitation; Promoter; Biochemistry; Transcription factor; Gene; Escherichia coli; Gene expression","score_opus":0.004150967153326261,"score_gpt":0.19163076616754804,"score_spread":0.18747979901422177,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1918630801","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9872698,0.00011140709,0.000105313375,0.01033685,0.0014849196,0.00048221092,0.00012289405,0.00004158273,0.000045023546],"genre_scores_gemma":[0.99481636,0.000093338436,0.0004093365,0.003242162,0.000497088,0.00008795323,0.00017909767,0.00005274453,0.00062189205],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99817634,0.00008977416,0.00032936013,0.00065249053,0.000053359287,0.0006986872],"domain_scores_gemma":[0.9991234,0.000023279219,0.00009197479,0.0006300211,0.00004252022,0.00008882056],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00021149225,0.00034891677,0.0002560078,0.00006714851,0.00034323975,0.000059247475,0.0006494032,0.000787293,0.00007286203],"category_scores_gemma":[0.00003891148,0.0002565051,0.00018974772,0.00013431274,0.0006663089,0.0000045818524,0.00015051948,0.0005912015,0.00008387301],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013818318,0.00003738385,0.00012339855,0.000006473595,0.00012130223,0.000004056905,0.000041642736,2.872356e-7,0.9906098,0.000037243342,0.006780609,0.0020995825],"study_design_scores_gemma":[0.0004161533,0.00016074293,0.00015258799,0.0000058117425,0.000014211776,0.00007255448,0.000015832935,8.285544e-7,0.68379486,0.000005968476,0.31511626,0.00024416266],"about_ca_topic_score_codex":0.0000151657405,"about_ca_topic_score_gemma":0.0000854885,"teacher_disagreement_score":0.30833566,"about_ca_system_score_codex":0.000015144087,"about_ca_system_score_gemma":0.00006406342,"threshold_uncertainty_score":0.99998873},"labels":[],"label_agreement":null},{"id":"W1935764071","doi":"10.1093/femsle/fnv153","title":"Regulation of indole-3-acetic acid biosynthesis by branched-chain amino acids in<i>Enterobacter cloacae</i>UW5","year":2015,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Probiotics and Fermented Foods","field":"Agricultural and Biological Sciences","cited_by":15,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of New Brunswick","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Enterobacter cloacae; Biochemistry; Valine; Aromatic amino acids; Isoleucine; Amino acid; Indole-3-acetic acid; Regulon; Biosynthesis; Biology; Branched-chain amino acid; Enzyme; Leucine; Chemistry; Transcription factor; Escherichia coli; Auxin; Gene; Enterobacteriaceae","score_opus":0.013954292252899736,"score_gpt":0.1894789218863931,"score_spread":0.17552462963349336,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1935764071","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9938424,0.00019322852,0.00002930556,0.0052016466,0.00024635482,0.00021723003,0.00014841765,0.000033596058,0.000087809676],"genre_scores_gemma":[0.99743295,0.000017139637,0.0001519521,0.0018835526,0.0000794896,0.00000894724,0.0003671103,0.000002534699,0.00005633835],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9986004,0.00017420402,0.00039173441,0.0003711658,0.000066195746,0.00039629356],"domain_scores_gemma":[0.9995293,0.00006221513,0.00018245539,0.00009978577,0.000040370775,0.00008589768],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003194869,0.00020929199,0.00031773423,0.00004160027,0.000046804198,0.000019974126,0.00030910323,0.00024513807,0.00007539507],"category_scores_gemma":[0.00003297615,0.00010030431,0.00009620972,0.00025545727,0.0002158877,0.00008870787,0.00010109262,0.00017625144,0.00003941594],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007436091,0.0000948891,0.024795799,0.0000049340556,0.000020511072,0.000001761819,0.00011439444,0.000004240338,0.96885484,0.000012438482,0.0035895624,0.002432267],"study_design_scores_gemma":[0.001055498,0.00048533888,0.14322314,0.000080114136,0.000024874498,0.000036690417,0.00017816314,0.000025471183,0.83672005,0.00009265143,0.017599301,0.00047871543],"about_ca_topic_score_codex":0.000077375524,"about_ca_topic_score_gemma":0.00008406662,"teacher_disagreement_score":0.1321348,"about_ca_system_score_codex":0.000060018243,"about_ca_system_score_gemma":0.0000068312315,"threshold_uncertainty_score":0.4090291},"labels":[],"label_agreement":null},{"id":"W1936829001","doi":"10.1111/j.1574-6968.2010.02172.x","title":"Ssg, a putative glycosyltransferase, functions in lipo- and exopolysaccharide biosynthesis and cell surface-related properties in Pseudomonas alkylphenolia","year":2010,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Bacterial biofilms and quorum sensing","field":"Biochemistry, Genetics and Molecular Biology","cited_by":32,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"Ministry of Education, Science and Technology; National Research Foundation of Korea; Changwon National University; National Research Foundation","keywords":"Mutant; Mannose; Transposable element; Biology; Glycosyltransferase; Fucose; Gene; Biochemistry; Pseudomonas aeruginosa; Pseudomonas; Microbiology; Transposon mutagenesis; Bacteria; Genetics; Glycoprotein","score_opus":0.005161255812585026,"score_gpt":0.18103776151412895,"score_spread":0.17587650570154392,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1936829001","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9974435,0.00042422515,0.000008493336,0.0014655165,0.00030105762,0.00023768796,0.00006362804,0.000013346909,0.000042521136],"genre_scores_gemma":[0.9985414,0.00010902748,0.0004539839,0.0006494796,0.000053853517,0.0000072667895,0.000087869776,0.000023528435,0.000073562966],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9987593,0.00009998817,0.0002727282,0.0004885875,0.00002106182,0.00035833352],"domain_scores_gemma":[0.9996722,0.000027437327,0.0000557555,0.00016648821,0.000018996323,0.00005915235],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00016374305,0.0002275663,0.00024314961,0.0001005328,0.00007647654,0.000028012311,0.00008030529,0.00032569555,0.000013807439],"category_scores_gemma":[0.00002906024,0.00020417228,0.000040367133,0.00010442498,0.00039017812,0.000010392737,0.00006913518,0.0002941472,0.0000065302866],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012608683,0.000050200673,0.009025425,0.000011975034,0.00002701937,0.00001140269,0.00032452153,0.000009955754,0.9898778,0.000004060165,0.000099340585,0.0004321833],"study_design_scores_gemma":[0.00091504154,0.00010081119,0.0063739996,0.000022128172,0.000015854019,0.00010360749,0.00018688946,0.00001532296,0.99081063,0.0000044449343,0.0011650241,0.00028626644],"about_ca_topic_score_codex":0.00044396825,"about_ca_topic_score_gemma":0.0011396526,"teacher_disagreement_score":0.002651425,"about_ca_system_score_codex":0.000010635835,"about_ca_system_score_gemma":0.000030498475,"threshold_uncertainty_score":0.8325904},"labels":[],"label_agreement":null},{"id":"W1940081949","doi":"10.1111/j.1574-6968.2010.01977.x","title":"ACC deaminase increases the Agrobacterium tumefaciens-mediated transformation frequency of commercial canola cultivars","year":2010,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Plant tissue culture and regeneration","field":"Biochemistry, Genetics and Molecular Biology","cited_by":24,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Waterloo","funders":"","keywords":"Agrobacterium tumefaciens; Canola; Brassica; Ethylene; Transformation (genetics); Biology; Cultivar; Horticulture; Botany; Gene; Biochemistry","score_opus":0.005592914536598528,"score_gpt":0.20593306941570558,"score_spread":0.20034015487910706,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1940081949","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9968177,0.00014787097,0.00018031608,0.001903729,0.00037675086,0.00019694967,0.00030110142,0.000011637964,0.00006391935],"genre_scores_gemma":[0.9943986,0.000032393087,0.00014422783,0.0016003974,0.00021690746,0.000014169383,0.003533164,0.000009422111,0.000050714876],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9992678,0.00009274372,0.00021959357,0.00018604769,0.000032008094,0.00020176539],"domain_scores_gemma":[0.9995651,0.000019825706,0.000111161484,0.00020797881,0.00005787219,0.000038023765],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012524918,0.00014574635,0.00013748907,0.000033392316,0.00012335944,0.000011121683,0.00021637898,0.00022205952,0.000019277244],"category_scores_gemma":[0.000047370275,0.00009728429,0.00007502921,0.000064450964,0.00027597698,0.000008197209,0.000027452717,0.00017046991,0.000013815365],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000025114168,0.000034383953,0.0023262403,0.0000061240116,0.000039631803,0.0000020603488,0.00021895643,0.0000048708143,0.9897078,0.00002208306,0.0073048957,0.00030783663],"study_design_scores_gemma":[0.00038277174,0.00005679903,0.010265562,0.000005889832,0.00002526997,0.00014956054,0.00004056495,0.000003019561,0.9554197,0.0000014099522,0.033501387,0.00014805756],"about_ca_topic_score_codex":0.0008555503,"about_ca_topic_score_gemma":0.0041056843,"teacher_disagreement_score":0.034288093,"about_ca_system_score_codex":0.000008089183,"about_ca_system_score_gemma":0.00005662256,"threshold_uncertainty_score":0.3967138},"labels":[],"label_agreement":null},{"id":"W1942421281","doi":"10.1111/j.1574-6968.2011.02209.x","title":"Isolation and identification of soil bacteria growing at the expense of arbuscular mycorrhizal fungi","year":2011,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Mycorrhizal Fungi and Plant Interactions","field":"Agricultural and Biological Sciences","cited_by":105,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Biology; Botany; Rhizosphere; Temperature gradient gel electrophoresis; Bacteria; Spore; Microbiology; Bacillus (shape); Paenibacillus; Hypha; Microbacterium; 16S ribosomal RNA","score_opus":0.01226566602060547,"score_gpt":0.18214967588019088,"score_spread":0.1698840098595854,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1942421281","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99840003,0.00027431964,0.000032845765,0.00037894017,0.00029910318,0.00011259644,0.00039573005,0.000011174519,0.00009527458],"genre_scores_gemma":[0.9986853,0.00013439346,0.000052191375,0.00032338922,0.000049747498,0.0000055827954,0.00069616677,8.636302e-7,0.00005235677],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9993234,0.00010149312,0.0002619679,0.00016270184,0.000026947859,0.00012348399],"domain_scores_gemma":[0.9992929,0.00039940892,0.00019128466,0.00006602826,0.00003039613,0.00001998254],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00017174972,0.00008533137,0.00012725047,0.000015202775,0.00010268846,0.0000066760163,0.00011856014,0.000071006485,0.0012802576],"category_scores_gemma":[0.000032986853,0.00003361581,0.000067035566,0.00008066938,0.000039577346,0.000094206254,0.00005159061,0.00006541248,0.00005165301],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000058733265,0.000015294965,0.047376957,0.0000043752048,0.000017608014,6.843847e-7,0.00029068877,0.00000246512,0.9506693,0.00008159613,0.0011338049,0.00034847745],"study_design_scores_gemma":[0.00005990713,0.00009544738,0.15734789,0.000032042903,0.00004041335,0.00010434412,0.0002803248,0.000035765646,0.83896035,0.000067822424,0.0028330078,0.00014270333],"about_ca_topic_score_codex":0.00056774233,"about_ca_topic_score_gemma":0.00009106382,"teacher_disagreement_score":0.111708984,"about_ca_system_score_codex":0.0000086595655,"about_ca_system_score_gemma":0.0000018492897,"threshold_uncertainty_score":0.9996327},"labels":[],"label_agreement":null},{"id":"W1947968047","doi":"10.1111/j.1574-6968.2010.02201.x","title":"Sphaerodes mycoparasitica biotrophic mycoparasite of 3-acetyldeoxynivalenol- and 15-acetyldeoxynivalenol-producing toxigenic Fusarium graminearum chemotypes","year":2010,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Mycotoxins in Agriculture and Food","field":"Agricultural and Biological Sciences","cited_by":25,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"Natural Sciences and Engineering Research Council of Canada; Ministry of Agriculture - Saskatchewan","keywords":"Fusarium; Chemotype; Biology; Trichothecene; Mycotoxin; Botany; Fungi imperfecti; Gibberella zeae; Microbiology","score_opus":0.0059949533210517676,"score_gpt":0.18863282442251272,"score_spread":0.18263787110146096,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1947968047","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.993352,0.00067304884,0.000008049166,0.004230622,0.0007329048,0.00040986398,0.00027140128,0.00012710773,0.00019503341],"genre_scores_gemma":[0.9961499,0.0001578026,0.0011945508,0.0013109292,0.00064332265,0.000017473238,0.00037665607,0.0000063095454,0.00014308275],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9976135,0.00012298423,0.0005178058,0.0008706157,0.00011727681,0.0007578464],"domain_scores_gemma":[0.9989743,0.0002266334,0.00026769796,0.00027100756,0.000095618976,0.00016469641],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00034499238,0.00044377873,0.0005982684,0.000051831783,0.00028049486,0.000057460922,0.00054798485,0.00042002622,0.0002724577],"category_scores_gemma":[0.000095042735,0.00020278285,0.00019343513,0.00041496352,0.00063558534,0.000143105,0.00021415454,0.00062458316,0.00007919211],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000562222,0.00009575034,0.011186163,0.000030311245,0.00006964796,0.0000095164705,0.00020385369,0.0000018759276,0.98393834,0.000101511905,0.000833082,0.0034737228],"study_design_scores_gemma":[0.00040732665,0.00039468802,0.13363737,0.00002853949,0.00007579011,0.00038019614,0.00014240481,0.000005121932,0.853563,0.000054446533,0.010705993,0.0006051242],"about_ca_topic_score_codex":0.0001667168,"about_ca_topic_score_gemma":0.0002299369,"teacher_disagreement_score":0.13037534,"about_ca_system_score_codex":0.000019970983,"about_ca_system_score_gemma":0.000012235002,"threshold_uncertainty_score":0.82692444},"labels":[],"label_agreement":null},{"id":"W1950654622","doi":"10.1016/s0378-1097(04)00006-0","title":"Environmental genomics, the big picture?","year":2004,"lang":"en","type":"review","venue":"FEMS Microbiology Letters","topic":"Genomics and Phylogenetic Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":149,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"European Commission; Genome Canada","keywords":"Metagenomics; Genome; Genomics; Biology; Comparative genomics; Evolutionary biology; Computational biology; Ecology; Gene; Genetics","score_opus":0.012901854119611214,"score_gpt":0.2197831221636167,"score_spread":0.20688126804400547,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1950654622","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.008590465,0.9889871,0.000036630074,0.00020334429,0.0010894395,0.0005757516,0.00047343265,0.00000472655,0.00003910665],"genre_scores_gemma":[0.001248813,0.99459106,0.00012991061,0.0017893631,0.000998545,0.000079926256,0.0009115649,0.00007845853,0.00017237735],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.99825436,0.0001472999,0.00041486952,0.0006819347,0.00003266672,0.00046887473],"domain_scores_gemma":[0.99895114,0.00002688776,0.00026181954,0.00070316374,0.000006151794,0.000050829236],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00013331519,0.00055009674,0.0007481743,0.00005184424,0.00020026682,0.000022777505,0.0006859344,0.00047846723,0.00001411308],"category_scores_gemma":[0.0000090346,0.0003671153,0.0005721585,0.000045135315,0.0004940507,2.2391613e-7,0.0004444577,0.00032004996,0.00013632995],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000012891306,0.000056882902,0.00003186251,0.0006625406,0.0015362267,0.000015186325,0.00010900485,0.000029336805,0.7025877,0.000011335112,0.008617371,0.28632966],"study_design_scores_gemma":[0.0001840433,0.000059665723,0.00002140566,0.00015513189,0.00026665704,0.00024183888,0.0000120780805,1.8787725e-8,0.00068310206,0.000005778572,0.99795365,0.00041661013],"about_ca_topic_score_codex":0.0000078687435,"about_ca_topic_score_gemma":0.000009669705,"teacher_disagreement_score":0.9893363,"about_ca_system_score_codex":0.000100119214,"about_ca_system_score_gemma":0.00013467888,"threshold_uncertainty_score":0.9998781},"labels":[],"label_agreement":null},{"id":"W1952076308","doi":"10.1111/j.1574-6968.2007.01045.x","title":"Parallel evolution of multidrug-resistance in Salmonella enterica isolated from swine","year":2008,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Salmonella and Campylobacter epidemiology","field":"Agricultural and Biological Sciences","cited_by":28,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Université de Montréal; McGill University","funders":"","keywords":"Salmonella enterica; Salmonella; Serotype; Multiple drug resistance; Biology; Antibiotic resistance; Multilocus sequence typing; Microbiology; Typing; Antibiotics; Enterobacteriaceae; Phylogenetic tree; Drug resistance; Genetics; Bacteria; Genotype; Gene; Escherichia coli","score_opus":0.014407256640524295,"score_gpt":0.19741944105272904,"score_spread":0.18301218441220474,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1952076308","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9959102,0.00086067576,0.00010229548,0.002484683,0.00022403049,0.00016524996,0.000120344375,0.000045536188,0.00008694341],"genre_scores_gemma":[0.9975973,0.00010015107,0.0005667024,0.0012074271,0.00012268324,0.000011847306,0.00031739674,0.0000018037548,0.00007471624],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99830604,0.00029582027,0.0004917037,0.0004512018,0.000039710267,0.00041550153],"domain_scores_gemma":[0.99926853,0.00032735296,0.00021685637,0.00010518179,0.00002890792,0.000053178],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014002534,0.00020210152,0.00045071714,0.000031795593,0.00007690826,0.000002969507,0.00030958612,0.00021589581,0.00013366158],"category_scores_gemma":[0.000041390063,0.000096076124,0.00012526537,0.0002695383,0.00029610848,0.000052481715,0.00006926489,0.00018481926,0.00006581742],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015439787,0.00006469421,0.20870404,0.0000015227038,0.000018321818,0.000021472299,0.00010589108,0.000016474809,0.7882621,0.000007349615,0.0024993236,0.00014435916],"study_design_scores_gemma":[0.0006033936,0.00010648592,0.98697776,0.000029811357,0.000009242788,0.000036232093,0.000056275116,0.000040050825,0.00522674,0.000117696254,0.0065206126,0.00027571942],"about_ca_topic_score_codex":0.0023153708,"about_ca_topic_score_gemma":0.0012350753,"teacher_disagreement_score":0.7830354,"about_ca_system_score_codex":0.00007144818,"about_ca_system_score_gemma":0.000007192451,"threshold_uncertainty_score":0.39178708},"labels":[],"label_agreement":null},{"id":"W1963784538","doi":"10.1111/j.1574-6968.1997.tb12599.x","title":"Identification of a Streptococcus suis 60-kDa heat-shock protein using Western blotting","year":2006,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Streptococcal Infections and Treatments","field":"Medicine","cited_by":10,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Cegep de Saint Hyacinthe","funders":"","keywords":"Streptococcus suis; Polyclonal antibodies; Heat shock protein; Antiserum; Monoclonal antibody; Biology; Blot; Microbiology; Serotype; HSPA14; GroEL; Heat shock; Western blot; Bacteria; Antigen; Molecular biology; Virulence; Antibody; Hsp70; Biochemistry; Escherichia coli; Immunology; Gene","score_opus":0.015332552341844297,"score_gpt":0.2702556793018847,"score_spread":0.25492312696004044,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1963784538","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99720824,0.00007436359,0.00081206666,0.0005543028,0.00016246985,0.0010288383,0.000041060754,0.00006473131,0.00005393925],"genre_scores_gemma":[0.9986886,8.716864e-7,0.00043743342,0.00020200368,0.00015062779,0.000076446995,0.00014349725,0.000023122402,0.0002773941],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99877924,0.00006062111,0.0004920787,0.00033418322,0.000046450885,0.0002874494],"domain_scores_gemma":[0.99937433,0.000030086658,0.00018529092,0.000300706,0.000070173286,0.00003943682],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00010194168,0.00018144955,0.00031358545,0.00016826294,0.00009686217,0.000014172044,0.00006327278,0.00012561936,0.000051330306],"category_scores_gemma":[0.000017170998,0.00016140613,0.00013381627,0.00019044666,0.00015721151,0.000055064236,0.00003308074,0.00013474714,0.00004390489],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000019365252,0.00013958309,0.33197656,0.000024860505,0.000074559786,0.000018623427,0.00002258011,0.000069377376,0.6673745,0.000005624716,0.00014674853,0.00012765033],"study_design_scores_gemma":[0.0018935889,0.0001689017,0.19213054,0.00017659891,0.0001792754,0.00019356751,0.000029915931,0.00010401618,0.8042339,0.000014827606,0.0006733151,0.00020153579],"about_ca_topic_score_codex":0.0009931305,"about_ca_topic_score_gemma":0.000043781198,"teacher_disagreement_score":0.13984603,"about_ca_system_score_codex":0.00012374966,"about_ca_system_score_gemma":0.000033196648,"threshold_uncertainty_score":0.65819514},"labels":[],"label_agreement":null},{"id":"W1965742411","doi":"10.1016/s0378-1097(03)00068-5","title":"Transferrin-dependent expression of TbpA by<i>Histophilus ovis</i>involves a poly G tract within<i>tbpA</i>","year":2003,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Microbial infections and disease research","field":"Immunology and Microbiology","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Transferrin; Strain (injury); Open reading frame; Molecular biology; Biology; Phase variation; Microbiology; Start codon; Gene; Chemistry; Messenger RNA; Biochemistry; Phenotype; Anatomy; Peptide sequence","score_opus":0.010464495352121713,"score_gpt":0.2286594702045042,"score_spread":0.21819497485238248,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1965742411","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9852808,0.009123275,0.0013809175,0.00071928924,0.0014019986,0.0005423567,0.000663331,0.0001182291,0.00076978584],"genre_scores_gemma":[0.9960799,0.0001580861,0.00013892526,0.0016500393,0.000036534067,0.0000497114,0.0005048859,0.000052673302,0.0013292255],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9967156,0.00084047316,0.00075622025,0.00076056796,0.00004739001,0.0008797352],"domain_scores_gemma":[0.9987842,0.00018848554,0.00023544331,0.00060008647,0.00009351952,0.00009828018],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0005117907,0.000455023,0.00067933026,0.0003131243,0.00036249863,0.000021447917,0.00042421697,0.00058030745,0.0015374856],"category_scores_gemma":[0.00007215433,0.00040541944,0.00034517772,0.000247528,0.00095168524,0.00013538328,0.00007235452,0.00073828123,0.00040358256],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00021844104,0.0006198023,0.0013837396,0.00004542729,0.00015139638,0.000020574324,0.0003940226,0.00001735712,0.95597935,0.00024426598,0.040765725,0.00015990967],"study_design_scores_gemma":[0.00233591,0.00023721848,0.00016247995,0.000058602927,0.00006940278,0.00047979798,0.00015087504,2.7397022e-7,0.9336948,0.000038747363,0.062357567,0.000414356],"about_ca_topic_score_codex":0.00031221943,"about_ca_topic_score_gemma":0.00003560701,"teacher_disagreement_score":0.022284571,"about_ca_system_score_codex":0.00011427899,"about_ca_system_score_gemma":0.00015480726,"threshold_uncertainty_score":0.9998398},"labels":[],"label_agreement":null},{"id":"W1965899226","doi":"10.1111/j.1574-6968.2011.02422.x","title":"A snap-shot of Mannheimia hemolyticaA1 gene expression during infection in the bovine host","year":2011,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Microbial infections and disease research","field":"Immunology and Microbiology","cited_by":12,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"Ontario Ministry of Agriculture, Food and Rural Affairs; Ministry of Agriculture, Food and Rural Affairs; U.S. Department of Agriculture","keywords":"Biology; Gene; Gene expression; In vivo; Virulence; Microarray; RNA; Microbiology; Complementary DNA; In vitro; Regulation of gene expression; Molecular biology; Genetics","score_opus":0.02872742863939889,"score_gpt":0.2525564149933516,"score_spread":0.22382898635395268,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1965899226","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9976603,0.00050254504,0.00009745527,0.00031364616,0.00039585552,0.00039363976,0.000062087325,0.000040381947,0.0005341113],"genre_scores_gemma":[0.99895316,0.00008803868,0.00007944742,0.00050572335,0.000040706178,0.000047613965,0.00015562709,0.000017930994,0.00011174991],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9981815,0.00048220248,0.00041311345,0.0003757513,0.000021856293,0.0005255434],"domain_scores_gemma":[0.99924695,0.00009042605,0.00014243735,0.00044644313,0.000049669972,0.00002408478],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0003749702,0.00021893292,0.00030531085,0.0003262069,0.0001977659,0.000011205114,0.00030461285,0.00028004072,0.0011660777],"category_scores_gemma":[0.00004574975,0.00016124648,0.00015249138,0.0002950392,0.00048992,0.000087986045,0.00014780276,0.00047368955,0.00027355563],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00034260974,0.0003079212,0.024264552,0.000031455616,0.00007054107,0.00002558073,0.0006988211,0.0000026851756,0.97130644,0.000049379334,0.0028502818,0.00004971695],"study_design_scores_gemma":[0.0012269769,0.00014547053,0.074029386,0.000048241604,0.000027652284,0.00043386462,0.000076808756,2.7448291e-7,0.92216593,0.0000113921415,0.0016490233,0.00018500163],"about_ca_topic_score_codex":0.00086671254,"about_ca_topic_score_gemma":0.00008434831,"teacher_disagreement_score":0.049764834,"about_ca_system_score_codex":0.00005536223,"about_ca_system_score_gemma":0.000035899353,"threshold_uncertainty_score":0.999747},"labels":[],"label_agreement":null},{"id":"W1967256623","doi":"10.1111/1574-6968.12248","title":"Sequence-based analysis of the microbial composition of water kefir from multiple sources","year":2013,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Probiotics and Fermented Foods","field":"Agricultural and Biological Sciences","cited_by":90,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"Science Foundation Ireland","keywords":"Kefir; Microorganism; Food science; Fermentation; Bacteria; Population; Yeast; Biology; Acetic acid bacteria; Lactobacillus paracasei; Lactic acid; Microbiology; Lactobacillus; Biochemistry","score_opus":0.012713070093635249,"score_gpt":0.17894301985817718,"score_spread":0.16622994976454192,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1967256623","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9945213,0.000020805108,0.000020993019,0.004569365,0.0001184321,0.00018096228,0.00054384925,0.000012806738,0.00001148117],"genre_scores_gemma":[0.99682945,0.0000014010142,0.0001467677,0.0020037275,0.000031272604,0.0000052933374,0.000972948,8.410156e-7,0.000008296904],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9991481,0.0001167574,0.00027152977,0.00021122351,0.000039217346,0.00021317601],"domain_scores_gemma":[0.9995769,0.00010631084,0.00014757359,0.00009580453,0.000048985487,0.000024413295],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0000726232,0.000118347525,0.0002639342,0.000029290472,0.00009109136,0.000013476432,0.00032939063,0.00011284404,0.00041372463],"category_scores_gemma":[0.000004479031,0.000036511716,0.00025035848,0.00024942053,0.00030285527,0.00003182946,0.00007682499,0.000092709786,0.00001640168],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00001575566,0.000053954205,0.033260014,0.0000018001289,0.00020536935,1.9642575e-7,0.00007938805,0.0002048363,0.9655611,0.0000018105582,0.00035949048,0.00025629107],"study_design_scores_gemma":[0.00016213984,0.000047925718,0.11920551,0.000012061577,0.00012913274,6.632403e-7,0.000027743054,0.00020014752,0.87956595,0.00001005073,0.00054129335,0.00009737044],"about_ca_topic_score_codex":0.0019125809,"about_ca_topic_score_gemma":0.00026037073,"teacher_disagreement_score":0.08599513,"about_ca_system_score_codex":0.000016282911,"about_ca_system_score_gemma":0.0000030368692,"threshold_uncertainty_score":0.45299944},"labels":[],"label_agreement":null},{"id":"W1968378474","doi":"10.1111/j.1574-6968.2000.tb08980.x","title":"Intact<i>Cryptosporidium parvum</i>oocysts isolated after in vitro excystation are infectious to neonatal mice","year":2000,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Parasitic Infections and Diagnostics","field":"Immunology and Microbiology","cited_by":43,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"Natural Sciences and Engineering Research Council of Canada; American Water Works Association Research Foundation; Water Research Foundation","keywords":"Cryptosporidium parvum; In vitro; Biology; Microbiology; Flow cytometry; In vitro toxicology; Immunology; Biochemistry","score_opus":0.0032439052659193313,"score_gpt":0.2028676401642394,"score_spread":0.19962373489832005,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1968378474","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99499375,0.00038696008,0.0006310877,0.0013489353,0.0015306695,0.0004807381,0.00025997413,0.0001461667,0.00022174668],"genre_scores_gemma":[0.9896767,0.000029080595,0.00015283754,0.008870744,0.00008821111,0.0001464844,0.00064382167,0.00003353524,0.000358565],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9978452,0.00028623975,0.0004986756,0.0005790546,0.000019678506,0.000771206],"domain_scores_gemma":[0.99923515,0.00023452086,0.000119138975,0.00029838472,0.000059442435,0.000053381722],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00018351806,0.0003545504,0.0004433014,0.00035848885,0.00013845158,0.000024569668,0.00019449016,0.0004662581,0.0012352054],"category_scores_gemma":[0.00007395651,0.00036249548,0.00011412787,0.00039742424,0.00020497991,0.00013026006,0.000055229666,0.00055579224,0.0051001823],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0009178134,0.00014145422,0.011094551,0.000009256464,0.00009043772,0.00014544521,0.00063047203,0.00023147432,0.97521925,0.000005804995,0.008871456,0.0026426066],"study_design_scores_gemma":[0.007195737,0.00060279405,0.105828844,0.00018516823,0.00013907936,0.0029191244,0.00025470366,0.000014750613,0.66736615,0.000058689413,0.21367231,0.0017626496],"about_ca_topic_score_codex":0.00045069406,"about_ca_topic_score_gemma":0.00023541643,"teacher_disagreement_score":0.30785307,"about_ca_system_score_codex":0.00018918754,"about_ca_system_score_gemma":0.000042057254,"threshold_uncertainty_score":0.9998827},"labels":[],"label_agreement":null},{"id":"W1968769252","doi":"10.1016/s0378-1097(03)00820-6","title":"Allelic exchange in<i>Francisella tularensis</i>using PCR products","year":2003,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Bacillus and Francisella bacterial research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":93,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Victoria","funders":"National Institute of Allergy and Infectious Diseases; National Institutes of Health","keywords":"Francisella tularensis; Biology; Mutant; Gene; Francisella; Polymerase chain reaction; Genetics; Microbiology; Ampicillin; Bacteria; Virulence","score_opus":0.017824349784083888,"score_gpt":0.23927747245203457,"score_spread":0.22145312266795067,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1968769252","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9954087,0.0021373418,0.0004148495,0.00061808375,0.0006602796,0.00033635716,0.000026451118,0.000013153748,0.0003847956],"genre_scores_gemma":[0.9950528,0.00025046125,0.0012383129,0.0026128301,0.0003408229,0.000022916249,0.00018835503,0.000045368473,0.00024813533],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9980741,0.0002525042,0.0002757947,0.000649523,0.000057241086,0.00069084496],"domain_scores_gemma":[0.99928737,0.00001360023,0.00007210408,0.00046522543,0.000080552236,0.00008114241],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004244042,0.00024904578,0.00026898895,0.00011424483,0.00008995281,0.00002235229,0.0002324474,0.00026454026,0.00008579884],"category_scores_gemma":[0.00013936413,0.0002423684,0.000087108056,0.00021579934,0.00022098918,0.000004737275,0.000093588904,0.00020208866,0.00005656147],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006669978,0.00004804149,0.001683697,0.000025551271,0.000033094744,0.00002291442,0.00006250555,0.000030668863,0.99303204,0.000019418263,0.0045013116,0.00047403167],"study_design_scores_gemma":[0.001061046,0.00009819079,0.0010242363,0.00001635874,0.000009050492,0.00014606694,0.000017240036,0.0000050980116,0.6712137,0.000009491437,0.32603127,0.00036827743],"about_ca_topic_score_codex":0.000050262242,"about_ca_topic_score_gemma":0.00006928308,"teacher_disagreement_score":0.32181838,"about_ca_system_score_codex":0.000040022354,"about_ca_system_score_gemma":0.000083380095,"threshold_uncertainty_score":0.9883497},"labels":[],"label_agreement":null},{"id":"W1968981551","doi":"10.1111/j.1574-6968.2001.tb10675.x","title":"Detection of the lst gene in different serogroups and LOS immunotypes of Neisseria meningitidis","year":2001,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":11,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Health Canada","funders":"Office of International Science and Engineering; Health Canada","keywords":"Neisseria meningitidis; Neisseria; Microbiology; Neisseriaceae; Gene; Biology; Biovar; Bacteria; Genetics; Antibiotics","score_opus":0.0066990219133749055,"score_gpt":0.1994521271271878,"score_spread":0.1927531052138129,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1968981551","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.997705,0.00075623626,0.000037424525,0.00038851428,0.00088600925,0.0001677241,0.000030883275,0.000013500847,0.000014719085],"genre_scores_gemma":[0.9996858,0.00008970047,0.000009975999,0.00008311276,0.00002583115,0.00001052987,0.000032790664,0.00000909156,0.00005311596],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99914074,0.0001685401,0.0003091017,0.00017850437,0.000003898238,0.00019922768],"domain_scores_gemma":[0.9995457,0.00005875141,0.00016553164,0.00019920689,0.000024342484,0.0000064745477],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000090428184,0.00014156489,0.00028823153,0.000104822866,0.000074697986,0.0000037426555,0.00012297195,0.00018028593,0.00007871281],"category_scores_gemma":[0.00001615696,0.0000951825,0.0000751018,0.00013991958,0.00023870255,0.000038027796,0.0000853695,0.00016347191,0.0000052614414],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012992937,0.000058867037,0.06383139,0.000009390589,0.00008167022,2.5783373e-7,0.00012100941,0.000003232846,0.93498194,0.000016276426,0.000065449545,0.00070059777],"study_design_scores_gemma":[0.000667544,0.000076809105,0.2701484,0.000023610903,0.00002155158,0.00014982597,0.0000339028,4.9219034e-7,0.72711676,0.000009265446,0.0016758275,0.000076019],"about_ca_topic_score_codex":0.00040437735,"about_ca_topic_score_gemma":0.00031764168,"teacher_disagreement_score":0.20786516,"about_ca_system_score_codex":0.00002076631,"about_ca_system_score_gemma":0.0000066732805,"threshold_uncertainty_score":0.38814297},"labels":[],"label_agreement":null},{"id":"W1969390206","doi":"10.1111/j.1574-6968.2011.02492.x","title":"TcyR regulates l-cystine uptake via the TcyABC transporter in Streptococcus mutans","year":2011,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Oral microbiology and periodontitis research","field":"Dentistry","cited_by":19,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"National Institute of Dental and Craniofacial Research; Canadian Institutes of Health Research; National Institutes of Health","keywords":"Cystine; Cysteine; Streptococcus mutans; Mutant; Biochemistry; Operon; Chemistry; Wild type; Biofilm; Microbiology; Transcriptional regulation; Regulator; Bacillus subtilis; Biology; Gene expression; Bacteria; Gene; Genetics","score_opus":0.024484307335157062,"score_gpt":0.2462025220990142,"score_spread":0.22171821476385714,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1969390206","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99545467,0.0003177211,0.0001421106,0.0016804202,0.0010247749,0.0005483186,0.00022267991,0.00008414957,0.0005251735],"genre_scores_gemma":[0.99586487,0.000015635695,0.00021594256,0.0022502076,0.00018920272,0.00006582389,0.0002943021,0.000037816357,0.0010661953],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9975565,0.00034758486,0.00057162356,0.00061697996,0.00005039752,0.0008569024],"domain_scores_gemma":[0.9990238,0.000099021665,0.00012512786,0.00062631373,0.000054869484,0.00007088011],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00046532514,0.00033120796,0.0004242464,0.00017939943,0.000192479,0.000025869402,0.0007540048,0.00041131317,0.003548885],"category_scores_gemma":[0.000027209606,0.00023978474,0.0001730708,0.0003454821,0.0008983492,0.00011120951,0.00009646061,0.0007896594,0.0013236309],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00016389777,0.00008206351,0.12780555,0.000013348438,0.00009124386,0.00048636482,0.00084014377,0.0000039059173,0.8589976,0.000027342694,0.010412156,0.0010764276],"study_design_scores_gemma":[0.0018467987,0.00016542553,0.83668566,0.000060880564,0.00004454207,0.0011186827,0.00018243318,0.000008459685,0.11212625,0.0001001499,0.047067765,0.0005929652],"about_ca_topic_score_codex":0.0006819188,"about_ca_topic_score_gemma":0.0030307856,"teacher_disagreement_score":0.7468713,"about_ca_system_score_codex":0.000059737566,"about_ca_system_score_gemma":0.000037703867,"threshold_uncertainty_score":0.99945396},"labels":[],"label_agreement":null},{"id":"W1970174932","doi":"10.1111/j.1574-6968.1997.tb10465.x","title":"Suppression of Francisella tularensis growth in the rat by co-infection with F. novicida","year":2006,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Bacillus and Francisella bacterial research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":16,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Victoria","funders":"","keywords":"Francisella tularensis; Francisella; Tularemia; Microbiology; Biology; In vivo; In vitro; Antimicrobial; Bacteria; Nitric oxide; Virology; Virulence; Biochemistry","score_opus":0.003925661513452932,"score_gpt":0.21090343375378987,"score_spread":0.20697777224033692,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1970174932","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99758285,0.00025683787,0.00077180663,0.00071708864,0.00012338786,0.00022477246,0.00006432089,0.0000054069947,0.00025351834],"genre_scores_gemma":[0.9981003,0.000053987496,0.00007793277,0.00080181344,0.00012085861,0.000017783546,0.0007628535,0.000015649062,0.0000488175],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99894565,0.00019476505,0.00020522902,0.00029642956,0.00006208444,0.00029582414],"domain_scores_gemma":[0.9995798,0.000027329605,0.0000815761,0.00023488876,0.000055792618,0.000020624151],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00026621803,0.00015204694,0.00017671626,0.000055680313,0.000063895655,0.000013515321,0.00018292891,0.00017683783,0.000023864019],"category_scores_gemma":[0.00001520103,0.00009954139,0.00006145979,0.00013088426,0.0002555657,0.0000035180947,0.00003246289,0.00014339667,0.000008196873],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002063121,0.00006175103,0.029975215,0.0000133577405,0.000014330234,0.000003861475,0.000024379535,0.000013501036,0.93420327,0.000009955033,0.03536268,0.00011139785],"study_design_scores_gemma":[0.0008411236,0.0002104666,0.0096136285,0.000012184385,0.000007761239,0.00003754835,0.000009021653,0.0000017420758,0.96056896,0.00000555346,0.028553061,0.00013895278],"about_ca_topic_score_codex":0.00066289416,"about_ca_topic_score_gemma":0.0001906243,"teacher_disagreement_score":0.0263657,"about_ca_system_score_codex":0.000012375004,"about_ca_system_score_gemma":0.00002038761,"threshold_uncertainty_score":0.405918},"labels":[],"label_agreement":null},{"id":"W1970200721","doi":"10.1111/j.1574-6968.2000.tb08889.x","title":"Tn<i>917-lac</i>mutagenesis of<i>Streptococcus mutans</i>to identify environmentally regulated genes","year":2000,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Bacterial Genetics and Biotechnology","field":"Biochemistry, Genetics and Molecular Biology","cited_by":34,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"National Institute of Dental and Craniofacial Research; Medical Research Council; National Institutes of Health; National Institute of General Medical Sciences; Medical Research Council Canada","keywords":"Transposon mutagenesis; Mutagenesis; Biology; lac operon; Transposable element; Mutant; Escherichia coli; Plasmid; Molecular biology; Streptococcus mutans; Gene; Operon; Strain (injury); Biochemistry; Bacteria; Genetics","score_opus":0.004491617929106581,"score_gpt":0.21031822247464535,"score_spread":0.20582660454553878,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1970200721","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99643713,0.0005249113,0.00013773073,0.0017743058,0.00034135944,0.00044193957,0.00021753565,0.000035164732,0.00008994176],"genre_scores_gemma":[0.99383163,0.0003917209,0.0011462136,0.0030577802,0.00022383813,0.00003912876,0.0006040984,0.000051625502,0.00065397064],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9980464,0.00011619907,0.00047987027,0.0007598723,0.000059922368,0.00053776044],"domain_scores_gemma":[0.99898696,0.000009738455,0.00013826281,0.0007247801,0.000033733297,0.00010655159],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0001436317,0.00034402244,0.00036541335,0.00010745211,0.00009115263,0.000017633678,0.0005482031,0.0005559636,0.0004960476],"category_scores_gemma":[0.000012256835,0.00034017916,0.0001690434,0.00020171047,0.00041593498,0.0000038049168,0.00015958672,0.00012642394,0.00019475482],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015591564,0.00007208148,0.0017479841,0.0000090317435,0.00014668885,0.0000114719,0.00002665933,0.000165289,0.9840313,0.0000026111722,0.004211197,0.009419755],"study_design_scores_gemma":[0.00048978516,0.00028411267,0.0068852585,0.000010399378,0.00003558638,0.0000706047,0.000012237886,0.0000011127912,0.82841676,0.0000037944967,0.163467,0.0003233459],"about_ca_topic_score_codex":0.00004187023,"about_ca_topic_score_gemma":0.000026244303,"teacher_disagreement_score":0.1592558,"about_ca_system_score_codex":0.000023801576,"about_ca_system_score_gemma":0.000030126224,"threshold_uncertainty_score":0.99990505},"labels":[],"label_agreement":null},{"id":"W1970600676","doi":"10.1111/j.1574-6968.2007.00989.x","title":"<i>Mycobacterium smegmatis</i>biofilm formation and sliding motility are affected by the serine/threonine protein kinase PknF","year":2007,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Mycobacterium research and diagnosis","field":"Medicine","cited_by":41,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"Fogarty International Center","keywords":"Mycobacterium smegmatis; Threonine; Biofilm; Serine; Kinase; Biology; Motility; Strain (injury); Protein kinase A; Mycobacterium tuberculosis; Microbiology; Cell biology; Beta-galactosidase; Biochemistry; Phosphorylation; Bacteria; Gene; Genetics; Tuberculosis; Escherichia coli","score_opus":0.010156176755759938,"score_gpt":0.24140024059261336,"score_spread":0.23124406383685342,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1970600676","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98431796,0.00040320665,0.0007233497,0.012756455,0.00016412395,0.0012611169,0.00017446055,0.00011342714,0.00008589555],"genre_scores_gemma":[0.993786,0.00004964519,0.00042048754,0.00475546,0.00017458318,0.00007836499,0.0006088376,0.000026169895,0.0001005027],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99822015,0.0001854792,0.00038465092,0.00039078048,0.000104802784,0.00071414135],"domain_scores_gemma":[0.99893934,0.00017868947,0.00018347248,0.00040026964,0.0000886405,0.00020957168],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00079687394,0.00027594675,0.0003761123,0.00012725299,0.00021786787,0.00005168992,0.00015452661,0.000188815,0.000116809795],"category_scores_gemma":[0.00025004524,0.00019386827,0.000088412955,0.00023672801,0.00023534294,0.00017994599,0.00012532956,0.0004526175,0.000050467464],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002387361,0.000083806604,0.028798051,0.00017211786,0.000052034895,0.000059191163,0.00012330692,1.3949206e-7,0.9435974,0.0000064627243,0.02547654,0.0013922501],"study_design_scores_gemma":[0.0020200198,0.00031083942,0.29794508,0.00021818391,0.000056341243,0.0005692483,0.00013473906,0.000020545414,0.6813734,0.00000500345,0.017093353,0.00025323432],"about_ca_topic_score_codex":0.00013247669,"about_ca_topic_score_gemma":0.00007520689,"teacher_disagreement_score":0.26914704,"about_ca_system_score_codex":0.00012282544,"about_ca_system_score_gemma":0.000023721943,"threshold_uncertainty_score":0.79057187},"labels":[],"label_agreement":null},{"id":"W1971206474","doi":"10.1111/j.1574-6968.2008.01445.x","title":"The GacSâGacA two-component regulatory system of<i>Pseudomonas fluorescens</i>: a bacterial two-hybrid analysis","year":2009,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Bacterial Genetics and Biotechnology","field":"Biochemistry, Genetics and Molecular Biology","cited_by":78,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research","keywords":"Pseudomonas fluorescens; Biology; Two-component regulatory system; Kinase; Regulator; Genetics; Gene; Bacteria; Mutant","score_opus":0.003613508929917262,"score_gpt":0.1967027395208841,"score_spread":0.19308923059096683,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1971206474","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9960148,0.0005032336,0.0003767636,0.0017065452,0.0008861933,0.00027558504,0.0001273312,0.000039942814,0.000069655995],"genre_scores_gemma":[0.99727887,0.00007884845,0.0005632746,0.0008459778,0.00054781977,0.000011662912,0.00060563214,0.000021739761,0.00004620476],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9979181,0.00024229406,0.0005747195,0.00062065135,0.000072568786,0.0005716161],"domain_scores_gemma":[0.9985376,0.000026035455,0.00033152365,0.0009424423,0.00008445219,0.000077927296],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0003733249,0.00032984014,0.00049365114,0.00014742653,0.00020344497,0.00003581927,0.00064572296,0.00026579786,0.000010568017],"category_scores_gemma":[0.000019869643,0.00025084423,0.00038926693,0.00023963717,0.0005021839,0.0000029931932,0.00017656795,0.00019517323,0.000013265008],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003118601,0.000042235028,0.00032818175,0.0000063354537,0.00059265847,0.000010493574,0.000012132847,0.00009214661,0.99453205,0.00018926676,0.0027277833,0.0011548864],"study_design_scores_gemma":[0.001119827,0.0002746578,0.0033083805,0.000012662612,0.00026606326,0.00014732301,0.000020286414,0.000023943117,0.9644456,0.000009223972,0.0300542,0.00031784043],"about_ca_topic_score_codex":0.00004329539,"about_ca_topic_score_gemma":0.000042289543,"teacher_disagreement_score":0.030086428,"about_ca_system_score_codex":0.000037908118,"about_ca_system_score_gemma":0.00005123083,"threshold_uncertainty_score":0.9999944},"labels":[],"label_agreement":null},{"id":"W1972235215","doi":"10.1111/j.1574-6968.2001.tb10851.x","title":"Characterization of biofilm growth and biocide susceptibility testing of<i>Mycobacterium phlei</i>using the MBEC⢠assay system","year":2001,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Mycobacterium research and diagnosis","field":"Medicine","cited_by":57,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"Mycobacterium phlei; Biofilm; Biocide; Microbiology; Biology; Chemistry; Bacteria; Mycobacterium","score_opus":0.02440405529983961,"score_gpt":0.2543566980463511,"score_spread":0.22995264274651148,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1972235215","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9969033,0.00007597632,0.0004470596,0.0016354749,0.00020663001,0.0004881484,0.0001259631,0.00004296188,0.00007451106],"genre_scores_gemma":[0.99806446,0.000051205603,0.00077424984,0.0007318686,0.00017171787,0.000010701631,0.00016766803,0.000020221516,0.000007927662],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9983968,0.0003079231,0.00048357068,0.00033602834,0.00008732371,0.00038836122],"domain_scores_gemma":[0.9986951,0.0003837697,0.000301859,0.00034750867,0.00017776342,0.00009399421],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006375387,0.00019195865,0.00046861195,0.00014806323,0.00009638669,0.000015364152,0.00013839331,0.00014282187,0.000024348668],"category_scores_gemma":[0.0003789595,0.00013513649,0.00009165539,0.0003637498,0.0004928155,0.000084824234,0.0001051878,0.00020366177,0.000004176065],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000103161554,0.000032678883,0.3803617,0.0002469374,0.000049086797,0.0000126964205,0.00007230611,2.6670324e-7,0.6189161,0.0000066481816,0.000062042294,0.00013633996],"study_design_scores_gemma":[0.00074639363,0.00020878851,0.3024726,0.00031780018,0.000109121574,0.00069755723,0.0001081272,0.00007061918,0.69494635,0.0000011904618,0.00017723587,0.00014420519],"about_ca_topic_score_codex":0.0003940046,"about_ca_topic_score_gemma":0.000008154842,"teacher_disagreement_score":0.07788913,"about_ca_system_score_codex":0.000064558575,"about_ca_system_score_gemma":0.00006723338,"threshold_uncertainty_score":0.55107063},"labels":[],"label_agreement":null},{"id":"W1972981895","doi":"10.1111/j.1574-6968.2008.01477.x","title":"Expression of the phosphonoalanine-degradative gene cluster from<i>Variovorax</i>sp. Pal2 is induced by growth on phosphonoalanine and phosphonopyruvate","year":2009,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Genomics and Phylogenetic Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":31,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Queen's University; Natural Environment Research Council; Sight Research UK; Invest Northern Ireland","keywords":"Operon; Gene; Biology; Gene cluster; Gammaproteobacteria; Transcription (linguistics); Genome; Genetics; Gene expression; Escherichia coli; 16S ribosomal RNA","score_opus":0.005105020821178285,"score_gpt":0.19029717137215257,"score_spread":0.1851921505509743,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1972981895","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99358255,0.0017020821,0.000071482595,0.0034321046,0.00035806894,0.00030989017,0.0004619645,0.0000064890555,0.00007535331],"genre_scores_gemma":[0.9828458,0.00039973954,0.00054497336,0.015737347,0.00010838433,0.0000134858155,0.00021527697,0.000027479742,0.00010751961],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99847776,0.000097686665,0.000349099,0.00064663443,0.00006538667,0.00036344226],"domain_scores_gemma":[0.9990683,0.00003870395,0.0002653282,0.0004973648,0.00006436513,0.000065908665],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00010642024,0.0003633947,0.00037356198,0.000031214295,0.00015339312,0.00001642225,0.00036688749,0.00025628964,0.00001888791],"category_scores_gemma":[0.000029341485,0.000264769,0.00012932297,0.0000928677,0.00022120909,0.0000021106248,0.00023493539,0.00020168592,0.000007119529],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00022337658,0.00006681478,0.005187435,0.0000031463285,0.00010644312,8.784477e-7,0.00035161586,0.000005200291,0.95784444,0.000004681052,0.035915725,0.00029022605],"study_design_scores_gemma":[0.0011394675,0.0003728272,0.026200473,0.000024787607,0.000034540335,0.0000071198297,0.000038994935,0.0000022773954,0.96566844,0.00006770987,0.006146818,0.00029654245],"about_ca_topic_score_codex":0.000205775,"about_ca_topic_score_gemma":0.0000125838305,"teacher_disagreement_score":0.029768907,"about_ca_system_score_codex":0.000020210855,"about_ca_system_score_gemma":0.000026758504,"threshold_uncertainty_score":0.99998045},"labels":[],"label_agreement":null},{"id":"W1973015488","doi":"10.1111/j.1574-6968.1997.tb10188.x","title":"Protein secretion in streptomycetes","year":2006,"lang":"en","type":"review","venue":"FEMS Microbiology Letters","topic":"Legume Nitrogen Fixing Symbiosis","field":"Agricultural and Biological Sciences","cited_by":32,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université du Québec; Institut National de la Recherche Scientifique","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Secretion; Signal peptide; Secretory protein; Ribosome; Identification (biology); Gene; Protein biosynthesis; Computational biology; Biology; Cell biology; Biochemistry; Peptide sequence; RNA; Ecology","score_opus":0.018951331990148024,"score_gpt":0.23354135570630932,"score_spread":0.2145900237161613,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1973015488","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.15264408,0.8452886,1.2531703e-7,0.00042710293,0.00019205552,0.0009839688,0.00027249343,0.00010667967,0.000084895866],"genre_scores_gemma":[0.0044822744,0.9760658,0.00029617993,0.0014235713,0.0016522225,0.0008428821,0.014470139,0.000021198284,0.0007457134],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9976352,0.00042450326,0.0006027546,0.000706459,0.00005484377,0.00057624583],"domain_scores_gemma":[0.99931085,0.00017011027,0.00034064348,0.000117097974,0.000017433378,0.0000438463],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00023294754,0.00047212135,0.0011059641,0.000069075875,0.00007784463,0.000039970902,0.00051877595,0.0006445455,0.00019656288],"category_scores_gemma":[0.00002462644,0.00018196137,0.00043547963,0.0004890325,0.00013553444,0.00005575485,0.00011789633,0.00052146334,0.00036093054],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000003089969,0.000058932856,0.0002154099,0.0005316631,0.000050717055,0.00003321223,0.000007733091,4.4780872e-8,0.57831323,0.000011506698,0.0045607323,0.41621372],"study_design_scores_gemma":[0.000079277146,0.00004952319,0.00013835137,0.0019848426,0.000063555715,0.000054512635,0.0000033345368,7.4266154e-8,0.0005727535,0.0000092452065,0.99655145,0.0004931055],"about_ca_topic_score_codex":0.0004102782,"about_ca_topic_score_gemma":0.00039359502,"teacher_disagreement_score":0.9919907,"about_ca_system_score_codex":0.00017513424,"about_ca_system_score_gemma":0.000017825061,"threshold_uncertainty_score":0.742017},"labels":[],"label_agreement":null},{"id":"W1973319869","doi":"10.1111/j.1574-6968.2008.01407.x","title":"Arginine and citrulline do not stimulate growth of two<i>Oenococcus oeni</i>strains in wine","year":2008,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Fermentation and Sensory Analysis","field":"Agricultural and Biological Sciences","cited_by":11,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"Lallemand","keywords":"Oenococcus oeni; Malolactic fermentation; Wine; Arginine; Biochemistry; Lactobacillus buchneri; Citrulline; Food science; Fermentation; Chemistry; Biology; Lactic acid; Bacteria; Amino acid; Lactobacillus plantarum","score_opus":0.019457286173897498,"score_gpt":0.2175325977604072,"score_spread":0.1980753115865097,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1973319869","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9927827,0.00004533182,0.000004302975,0.006851451,0.000046822624,0.00010741099,0.00008332141,0.000019353449,0.00005926752],"genre_scores_gemma":[0.99558604,0.00005237975,0.00014644006,0.0038667854,0.000081088685,0.0000032238556,0.0001642079,0.0000010244673,0.00009881979],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99905604,0.00010180356,0.00029671093,0.00027837558,0.000038550745,0.0002285394],"domain_scores_gemma":[0.9996814,0.000092407645,0.000102424674,0.00004657375,0.000028728276,0.00004845218],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00011574079,0.00013699017,0.0002801261,0.00004405365,0.00007860951,0.0000066053503,0.00012473954,0.00006799176,0.00023955366],"category_scores_gemma":[0.000017155744,0.000061992956,0.00007173941,0.00026878066,0.000289419,0.00004899166,0.000035852267,0.00011820113,0.000014173964],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000039796825,0.000041243155,0.039878003,0.000002611726,0.000022584927,0.000025413845,0.00015768089,0.00006499047,0.9589425,0.000023640605,0.00044827975,0.0003532877],"study_design_scores_gemma":[0.0023556356,0.00034374205,0.8577712,0.000027522132,0.000044087265,0.00019384485,0.00015785306,0.00013548297,0.13620336,0.00006174712,0.002215758,0.00048976555],"about_ca_topic_score_codex":0.00022111641,"about_ca_topic_score_gemma":0.00014633505,"teacher_disagreement_score":0.8227391,"about_ca_system_score_codex":0.0000116496085,"about_ca_system_score_gemma":0.0000030834283,"threshold_uncertainty_score":0.26229444},"labels":[],"label_agreement":null},{"id":"W1973631331","doi":"10.1111/1574-6968.12530","title":"Incubation temperature, osmolarity, and salicylate affect the expression of resistance-nodulation-division efflux pumps and outer membrane porins in<i>Acinetobacter baumannii</i>ATCC19606<sup>T</sup>","year":2014,"lang":"en","type":"letter","venue":"FEMS Microbiology Letters","topic":"Antibiotic Resistance in Bacteria","field":"Biochemistry, Genetics and Molecular Biology","cited_by":22,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba","funders":"Natural Sciences and Engineering Research Council of Canada; University of Manitoba","keywords":"Efflux; Incubation; Acinetobacter baumannii; Osmotic concentration; Microbiology; Biology; Bacteria; Bacterial outer membrane; Chemistry; Biochemistry; Pseudomonas aeruginosa; Genetics; Escherichia coli; Gene","score_opus":0.006941853898162858,"score_gpt":0.21873769343464525,"score_spread":0.2117958395364824,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1973631331","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.95707965,0.0005369891,0.00010216038,0.041100923,0.00030501254,0.0006660346,0.00014325879,0.000018218427,0.000047778765],"genre_scores_gemma":[0.9085169,0.000210169,0.00035618048,0.08595236,0.0010267827,0.000021243864,0.0033790732,0.00009062277,0.00044670294],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.99680316,0.0007175527,0.0007186787,0.0010785634,0.00013701573,0.0005450091],"domain_scores_gemma":[0.9982625,0.00018311098,0.0005155035,0.00089211215,0.00009430376,0.000052419004],"candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.00057675113,0.00062776153,0.00073833676,0.00020491821,0.00016325394,0.00008707091,0.00044038938,0.0015405926,0.00001439219],"category_scores_gemma":[0.00010256614,0.00047527926,0.00014677606,0.00012547852,0.00063955743,0.000022808148,0.00034366094,0.0010260153,0.0000052367827],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011747051,0.000017094051,0.024929773,0.00027058183,0.0000756638,0.000018813582,0.00015567741,0.00003362139,0.8507714,0.000002589542,0.12357117,0.000036092657],"study_design_scores_gemma":[0.0050202,0.0006058446,0.18460023,0.001979513,0.0002942288,0.0003647316,0.00008285723,0.000037721245,0.37655973,0.00013006921,0.42772102,0.00260385],"about_ca_topic_score_codex":0.00004495511,"about_ca_topic_score_gemma":0.00004999925,"teacher_disagreement_score":0.4742117,"about_ca_system_score_codex":0.000043621858,"about_ca_system_score_gemma":0.000037080405,"threshold_uncertainty_score":0.99976987},"labels":[],"label_agreement":null},{"id":"W1974256761","doi":"10.1111/j.1574-6968.2007.00642.x","title":"Mechanisms of action of ostrich β-defensins against<i>Escherichia coli</i>","year":2007,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Antimicrobial Peptides and Activities","field":"Immunology and Microbiology","cited_by":39,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"University of British Columbia; Massey University","keywords":"Peptide; Antimicrobial peptides; Escherichia coli; Bacteria; Antimicrobial; Defensin; Beta defensin; Cytoplasm; Biology; Biochemistry; Mechanism of action; Microbiology; Bacterial outer membrane; Chemistry; Gene; In vitro","score_opus":0.012936988007191287,"score_gpt":0.22251258113009117,"score_spread":0.2095755931228999,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1974256761","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9872765,0.0002473192,0.0097268615,0.00040042223,0.0013527182,0.00025119263,0.00014976658,0.00006286537,0.00053234654],"genre_scores_gemma":[0.9956286,0.000051275627,0.0013163614,0.002270326,0.00003637082,0.0000027998344,0.0002582634,0.000029748775,0.0004062597],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99826765,0.00014830084,0.0006315176,0.00035750863,0.000023350634,0.0005716436],"domain_scores_gemma":[0.9988467,0.00020412881,0.0005100401,0.00031742247,0.00009742485,0.000024284447],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0004290554,0.00028198442,0.0005985297,0.0002449461,0.000120428755,0.000004670761,0.0002728562,0.00046043436,0.00014955884],"category_scores_gemma":[0.00003800328,0.00026666254,0.00022919236,0.00025050488,0.00071152113,0.00009084956,0.00010348202,0.00038616933,0.00009817923],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002671293,0.00012916852,0.00041550293,0.00003539411,0.00024553153,0.0000061383853,0.0002199407,0.000016342423,0.98759556,0.000521737,0.0093251085,0.0012224223],"study_design_scores_gemma":[0.0009147761,0.00018296596,0.0018231812,0.00004434756,0.00005648287,0.000057497295,0.00039324444,3.90291e-7,0.98740655,0.00004988425,0.008822915,0.00024776638],"about_ca_topic_score_codex":0.0001724932,"about_ca_topic_score_gemma":0.00005068577,"teacher_disagreement_score":0.008410499,"about_ca_system_score_codex":0.00005001527,"about_ca_system_score_gemma":0.00004605024,"threshold_uncertainty_score":0.99997854},"labels":[],"label_agreement":null},{"id":"W1975182786","doi":"10.1111/j.1574-6968.2009.01706.x","title":"Natural competence in strains of<i>Actinobacillus pleuropneumoniae</i>","year":2009,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Microbial infections and disease research","field":"Immunology and Microbiology","cited_by":36,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"Biotechnology and Biological Sciences Research Council; Canadian Institutes of Health Research","keywords":"Biology; Actinobacillus pleuropneumoniae; Actinobacillus; Gene; Genetics; Pasteurellaceae; Competence (human resources); Genome; Microbiology; Haemophilus influenzae; Bacteria; Psychology","score_opus":0.00994470446246235,"score_gpt":0.24254143008024032,"score_spread":0.23259672561777797,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1975182786","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99547035,0.0011533404,0.00005127485,0.0018268416,0.000623959,0.00025225585,0.00011100677,0.000058267306,0.00045272298],"genre_scores_gemma":[0.9975006,0.00005103166,0.00007494457,0.0019013563,0.000026480831,0.0000054253933,0.00020923342,0.000010742363,0.00022017006],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9982212,0.00029340055,0.00042638436,0.0004092044,0.000019315927,0.0006305049],"domain_scores_gemma":[0.99937177,0.000095968004,0.00012509817,0.00032066667,0.0000560259,0.000030466508],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00022162477,0.0002267098,0.00040139697,0.00030691188,0.000109642024,0.000010870988,0.00032434938,0.00019835931,0.00027500535],"category_scores_gemma":[0.00005528743,0.00020782779,0.00015279467,0.00033466273,0.00048091455,0.00008414404,0.00006784551,0.0005819197,0.0003015427],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008158286,0.00018620315,0.0030617288,0.000008651308,0.00004583918,0.00003098182,0.00012696032,0.000029624804,0.99079055,0.00028363982,0.0037394871,0.0016147477],"study_design_scores_gemma":[0.005180926,0.0006618277,0.12648578,0.00014798084,0.000052943073,0.0014240189,0.00023471664,0.000009324071,0.83482164,0.00010766161,0.029884744,0.000988422],"about_ca_topic_score_codex":0.00015043639,"about_ca_topic_score_gemma":0.00006930896,"teacher_disagreement_score":0.1559689,"about_ca_system_score_codex":0.00006858745,"about_ca_system_score_gemma":0.00006484824,"threshold_uncertainty_score":0.8474971},"labels":[],"label_agreement":null},{"id":"W1975359336","doi":"10.1111/j.1574-6968.2001.tb10853.x","title":"Predicting the emergence of resistance to antifungal drugs","year":2001,"lang":"en","type":"review","venue":"FEMS Microbiology Letters","topic":"Microbial Natural Products and Biosynthesis","field":"Medicine","cited_by":34,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Credit Valley Hospital; University of Toronto","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Biology; Fitness landscape; Context (archaeology); Genetics; Genome; Gene; Antifungal; Human evolutionary genetics; Resistance (ecology); Antifungal drug; Allele; Drug resistance; Adaptation (eye); Adaptive evolution; Genetic Fitness; Evolutionary biology; Ecology; Population; Microbiology","score_opus":0.02463004001154348,"score_gpt":0.2867997484026036,"score_spread":0.26216970839106013,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1975359336","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0046566105,0.9866214,0.0000064758465,0.0058536003,0.0009657725,0.0013218492,0.00023978073,0.000044780507,0.0002897624],"genre_scores_gemma":[0.00078027986,0.99287564,0.00033147365,0.0028988398,0.0007535716,0.0000078307785,0.00017572168,0.000053298954,0.0021233256],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9976937,0.0002288059,0.0008282238,0.00067674275,0.00008238626,0.0004901127],"domain_scores_gemma":[0.9983899,0.00020748936,0.00048323235,0.00075079466,0.000088088455,0.00008047261],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00049472763,0.00044211352,0.0016402527,0.0001915172,0.00012438603,0.000010438694,0.00052041607,0.00034821246,0.0002658588],"category_scores_gemma":[0.00022609596,0.00024760573,0.0005148674,0.0006914726,0.00028838785,0.000024062123,0.00016597858,0.0006816923,0.00011597079],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000104980725,0.00006943692,0.000055863577,0.009536282,0.0006971761,0.00007277923,0.00026442323,3.5188603e-7,0.37975755,0.00001043931,0.38014165,0.22928904],"study_design_scores_gemma":[0.000100131525,0.00004182059,0.00001046459,0.0076497914,0.0006928504,0.00027163108,0.000030267323,4.4243492e-8,0.0023667589,4.1085687e-7,0.9885906,0.000245214],"about_ca_topic_score_codex":0.000034813373,"about_ca_topic_score_gemma":0.000013654558,"teacher_disagreement_score":0.608449,"about_ca_system_score_codex":0.000056867168,"about_ca_system_score_gemma":0.00011002689,"threshold_uncertainty_score":0.9999976},"labels":[],"label_agreement":null},{"id":"W1975550351","doi":"10.1111/j.1574-6968.2001.tb10685.x","title":"PhaR, a protein of unknown function conserved among short-chain-length polyhydroxyalkanoic acids producing bacteria, is a DNA-binding protein and represses<i>Paracoccus denitrificans phaP</i>expression in vitro","year":2001,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"biodegradable polymer synthesis and properties","field":"Materials Science","cited_by":47,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"RIKEN; Federation of European Microbiological Societies; Public Health Agency of Canada","keywords":"Biology; Biochemistry; Escherichia coli; Electrophoretic mobility shift assay; Molecular biology; Recombinant DNA; Molecular mass; Binding protein; Gel electrophoresis; FLAG-tag; Affinity chromatography; Nucleic acid sequence; Gene; Gene expression; Fusion protein; Enzyme","score_opus":0.015911565517717,"score_gpt":0.20804644729615515,"score_spread":0.19213488177843815,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1975550351","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.995601,0.0015740767,0.00010395241,0.0010847097,0.00028488922,0.001139047,0.00009242309,0.00008960273,0.000030272447],"genre_scores_gemma":[0.9978745,0.000026702635,0.000908297,0.0003383566,0.000091969894,0.00029311574,0.000040196606,0.000041644893,0.0003852191],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9968627,0.00051797135,0.0007678936,0.0010146244,0.00011902029,0.00071780983],"domain_scores_gemma":[0.99886316,0.00007605978,0.00035269634,0.00055609376,0.000052160547,0.00009980476],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0008085768,0.0004162937,0.0006586965,0.00024225858,0.00024152797,0.00008855768,0.00033983245,0.00027483836,0.00020299063],"category_scores_gemma":[0.00008781416,0.00034482285,0.00009684169,0.00028406843,0.0005876754,0.00034869707,0.00015878452,0.0002999861,0.000014482627],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0011887968,0.0001062692,0.0042806,0.00009850628,0.0000324013,0.000023123595,0.0007190426,8.7849827e-7,0.99176294,0.0000013534845,0.00018166106,0.0016044332],"study_design_scores_gemma":[0.00071253546,0.00011776024,0.0010066621,0.0004455895,0.00003710695,0.000053426713,0.00010417942,0.000025496924,0.99625146,0.0000048558986,0.00082749396,0.00041343013],"about_ca_topic_score_codex":0.0007311863,"about_ca_topic_score_gemma":0.000096789365,"teacher_disagreement_score":0.004488529,"about_ca_system_score_codex":0.00006788644,"about_ca_system_score_gemma":0.00006139686,"threshold_uncertainty_score":0.9999004},"labels":[],"label_agreement":null},{"id":"W1976064937","doi":"10.1111/j.1574-6968.2009.01777.x","title":"Yeast as a tool for characterizing mono-ADP-ribosyltransferase toxins","year":2009,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Toxin Mechanisms and Immunotoxins","field":"Immunology and Microbiology","cited_by":30,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"","keywords":"Yeast; Diphtheria toxin; Toxin; Saccharomyces cerevisiae; Biology; Microbiology; Mutant; Nap; Bacteria; Biochemistry; Genetics; Gene","score_opus":0.009110970401339142,"score_gpt":0.22042141704285803,"score_spread":0.21131044664151888,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1976064937","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9855523,0.00053590484,0.003636799,0.006531112,0.0019457071,0.0009447059,0.00046235163,0.00024368656,0.00014743343],"genre_scores_gemma":[0.9690386,0.00005640516,0.0009272488,0.027113914,0.00017689994,0.000105247025,0.0011646958,0.000050080656,0.0013669129],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.997512,0.00016213629,0.00054323266,0.0007178551,0.000021004249,0.0010437743],"domain_scores_gemma":[0.99912137,0.000097513075,0.0001565266,0.00052778836,0.000054931483,0.00004184583],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0002970431,0.00046909167,0.00059403176,0.00020203275,0.00040800465,0.000044189714,0.00050775975,0.00053716614,0.0005890878],"category_scores_gemma":[0.000061724,0.0004442575,0.0003509541,0.00013733347,0.00021579883,0.00017712082,0.000049686696,0.00048404638,0.0012886861],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003838478,0.00015803023,0.00006858395,0.000009338734,0.00016836284,0.000013689056,0.00035444504,0.0000018175082,0.98321927,0.0011727959,0.00888215,0.005567651],"study_design_scores_gemma":[0.0023436854,0.00065910287,0.0016524664,0.00003925276,0.000059277205,0.00032953132,0.000059719227,0.0000010713496,0.8100992,0.00012707977,0.18410365,0.0005259654],"about_ca_topic_score_codex":0.00002508439,"about_ca_topic_score_gemma":0.00000512141,"teacher_disagreement_score":0.1752215,"about_ca_system_score_codex":0.00008213521,"about_ca_system_score_gemma":0.000060526298,"threshold_uncertainty_score":0.9998009},"labels":[],"label_agreement":null},{"id":"W1978136031","doi":"10.1093/femsle/fnu058","title":"Rescue of fish exposed to a lethal dose of pathogen, by signals from sublethally exposed survivors","year":2014,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Fish Ecology and Management Studies","field":"Environmental Science","cited_by":11,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University; McMaster University Medical Centre","funders":"","keywords":"Bystander effect; Pathogen; Rainbow trout; Biology; Vibrio anguillarum; Fish <Actinopterygii>; Microbiology; Zoology; Andrology; Toxicology; Fishery; Immunology; Vibrio; Bacteria; Medicine; Genetics","score_opus":0.009012646417713894,"score_gpt":0.1927536053994623,"score_spread":0.1837409589817484,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1978136031","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.992176,0.00001238263,0.000629061,0.0055101095,0.00027654404,0.00034441228,0.00023737332,0.000030380832,0.0007837285],"genre_scores_gemma":[0.9831958,0.000008549492,0.00085394905,0.015549833,0.000028610746,0.000030230118,0.0001390136,0.000017478884,0.00017653621],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99822325,0.00032746335,0.00044795932,0.0005048607,0.00008159288,0.00041489725],"domain_scores_gemma":[0.9990754,0.0002758118,0.00019575651,0.00037646524,0.000012316005,0.00006420872],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.000522826,0.00022413727,0.00046388738,0.00006671666,0.00008812524,0.0000047715507,0.0004843977,0.00016120668,0.00094268983],"category_scores_gemma":[0.00008262662,0.00021246864,0.000099985475,0.00016598558,0.00056526635,0.00007008231,0.00041347253,0.00013481775,0.00014901774],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007186868,0.00007510925,0.054733396,0.0000065244144,0.00006683336,0.0000043505756,0.0004833709,0.00012490388,0.75020105,0.0000045059246,0.19410348,0.00012462179],"study_design_scores_gemma":[0.002254289,0.0007715737,0.39202708,0.00004414669,0.00009788111,0.0000051578872,0.0002869688,0.000014926431,0.5593173,0.00010274225,0.04435942,0.000718532],"about_ca_topic_score_codex":0.00069284794,"about_ca_topic_score_gemma":0.0023817378,"teacher_disagreement_score":0.33729368,"about_ca_system_score_codex":0.000044122546,"about_ca_system_score_gemma":0.000004245419,"threshold_uncertainty_score":0.99997056},"labels":[],"label_agreement":null},{"id":"W1978588781","doi":"10.1111/j.1574-6968.2009.01493.x","title":"Restoration of the crystallization of altered δ-endotoxins Cry1Ac, by the promotion of their<i>in vivo</i>integration into the<i>Bacillus thuringiensis</i>native crystals","year":2009,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Insect Resistance and Genetics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Agence Universitaire de la Francophonie","keywords":"Bacillus thuringiensis; Cry1Ac; Crystallization; In vivo; Promotion (chess); Chemistry; Microbiology; Biology; Biotechnology; Bacteria; Biochemistry; Genetically modified crops; Transgene; Gene; Genetics; Political science; Organic chemistry","score_opus":0.00637786576817851,"score_gpt":0.2125675573900653,"score_spread":0.2061896916218868,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1978588781","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9934287,0.0004241854,0.0035675943,0.001816184,0.00013178027,0.00049511093,0.00007111899,0.0000033652689,0.00006195893],"genre_scores_gemma":[0.99878883,0.00010367172,0.00013371947,0.0007081412,0.00005241911,0.000012793727,0.00012343902,0.000008916614,0.00006809404],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9988222,0.0003087749,0.00041933058,0.00021496521,0.000072918556,0.00016178745],"domain_scores_gemma":[0.9988811,0.00003149769,0.00052506954,0.0004042769,0.00014744079,0.0000106423595],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00030875325,0.00015100183,0.00018376508,0.00004363586,0.000081654565,0.00000680737,0.000306438,0.00013711335,0.00000441283],"category_scores_gemma":[0.0000735561,0.00008419888,0.00011076381,0.00018432303,0.0003485576,0.00000765553,0.00004383174,0.00010982314,1.9342446e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009032634,0.00006565827,0.00031573753,0.000011643083,0.000028242554,1.0433284e-7,0.0014394652,0.0004323705,0.9952149,0.00006877394,0.0019353188,0.00039749968],"study_design_scores_gemma":[0.00032926447,0.00024721117,0.0023393868,0.000039497118,0.000015678073,0.000005018408,0.00020110112,0.000023103687,0.994509,0.00013931585,0.002066304,0.00008512478],"about_ca_topic_score_codex":0.00005532977,"about_ca_topic_score_gemma":0.00035140908,"teacher_disagreement_score":0.005360103,"about_ca_system_score_codex":0.000027065287,"about_ca_system_score_gemma":0.000044244713,"threshold_uncertainty_score":0.3433531},"labels":[],"label_agreement":null},{"id":"W1979005457","doi":"10.1111/j.1574-6968.1997.tb12616.x","title":"The synthesis, secretion and role in virulence of the paracrystalline surface protein layers of Aeromonas salmonicida and A. hydrophila","year":2006,"lang":"en","type":"review","venue":"FEMS Microbiology Letters","topic":"Aquaculture disease management and microbiota","field":"Immunology and Microbiology","cited_by":62,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Victoria","funders":"","keywords":"Aeromonas salmonicida; Virulence; Bacterial outer membrane; Periplasmic space; Microbiology; Aeromonas hydrophila; Secretion; Peptidoglycan; Aeromonas; Biology; Laminin; Protease; Cell wall; Cell biology; Bacteria; Biochemistry; Cell; Gene; Enzyme; Escherichia coli","score_opus":0.007758914539254398,"score_gpt":0.22008767446237265,"score_spread":0.21232875992311825,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1979005457","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.20690459,0.7911228,0.000003119329,0.0003158233,0.00013941829,0.0011998403,0.00026747503,0.000012848782,0.00003411782],"genre_scores_gemma":[0.100809395,0.89789176,0.00003300384,0.000117027856,0.000025244783,0.000089832196,0.00044746324,0.000050375944,0.0005358907],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.99734426,0.0008598018,0.0008144846,0.0005275692,0.000025237261,0.00042867355],"domain_scores_gemma":[0.99831426,0.0003433106,0.0008162217,0.00048164782,0.000029425893,0.000015157067],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00047548432,0.0004699386,0.0011795863,0.00009766133,0.00017431489,0.000013699391,0.00055665127,0.00054547074,0.000012613611],"category_scores_gemma":[0.000053473024,0.00027129936,0.00026226632,0.00022377612,0.0014920647,0.000039623526,0.0003626578,0.0005366039,0.000010305696],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006487545,0.000073834126,0.00017985351,0.0018124777,0.00041876498,0.0000046905525,0.00010293025,0.0000064305264,0.97918266,0.00013133095,0.0015553499,0.016466798],"study_design_scores_gemma":[0.0006251792,0.00006199605,0.00027867086,0.0047024554,0.00076932966,0.00011871708,0.00011207359,9.206534e-7,0.011630644,0.000026796324,0.9811408,0.00053242286],"about_ca_topic_score_codex":0.0002530815,"about_ca_topic_score_gemma":0.00015228234,"teacher_disagreement_score":0.97958547,"about_ca_system_score_codex":0.00005494193,"about_ca_system_score_gemma":0.000057139212,"threshold_uncertainty_score":0.9999739},"labels":[],"label_agreement":null},{"id":"W1979619865","doi":"10.1016/s0378-1097(03)00429-4","title":"The HPr(Ser) kinase of<i>Streptococcus salivarius</i>: a hexameric bifunctional enzyme controlled by glycolytic intermediates and inorganic phosphate","year":2003,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Streptococcal Infections and Treatments","field":"Medicine","cited_by":10,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"Canadian Institutes of Health Research; Centre National de la Recherche Scientifique; Fonds Québécois de la Recherche sur la Nature et les Technologies","keywords":"Phosphofructokinase 2; PEP group translocation; Streptococcus salivarius; Phosphoenolpyruvate carboxykinase; Biochemistry; Pyruvate kinase; Fructose; Kinase; Chemistry; Catabolite repression; Fructose-bisphosphate aldolase; Enzyme; Glycolysis; Biology; Aldolase A; Streptococcus; Bacteria","score_opus":0.005208862416806232,"score_gpt":0.21753196846842168,"score_spread":0.21232310605161545,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1979619865","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9944523,0.0022298587,0.00013093138,0.0013584014,0.0005369131,0.0010253371,0.000050464747,0.000045233213,0.00017056343],"genre_scores_gemma":[0.99680966,0.00015535876,0.000062912855,0.0022118173,0.00004720399,0.00019985481,0.00009190077,0.00002326072,0.00039801927],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9986815,0.00014503887,0.00040995146,0.00034594905,0.000053202086,0.00036437754],"domain_scores_gemma":[0.99890226,0.00045740211,0.00020245754,0.00027195917,0.000062101,0.00010383038],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001660937,0.00025606662,0.00050691713,0.000087784465,0.00018915758,0.000021763064,0.000074392105,0.00011953982,0.00021388473],"category_scores_gemma":[0.0001680041,0.00016431796,0.00015584493,0.00020638091,0.0005945206,0.000040939885,0.000035529425,0.00021451422,0.00005036949],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00046345073,0.00022611805,0.13240577,0.000014663577,0.00072137214,0.00002211944,0.00005858128,0.0000023398259,0.8546313,0.00010135963,0.010767581,0.0005853285],"study_design_scores_gemma":[0.072256595,0.003963049,0.14380817,0.0002792539,0.0018204318,0.0018559181,0.00049772556,0.00006893791,0.6259568,0.00020567988,0.1480755,0.0012119706],"about_ca_topic_score_codex":0.00008672973,"about_ca_topic_score_gemma":0.000010613906,"teacher_disagreement_score":0.22867456,"about_ca_system_score_codex":0.00007277922,"about_ca_system_score_gemma":0.00006287191,"threshold_uncertainty_score":0.67006916},"labels":[],"label_agreement":null},{"id":"W1979810463","doi":"10.1016/s0378-1097(03)00299-4","title":"Induction of<i>Oenococcus oeni</i>H<sup>+</sup>-ATPase activity and mRNA transcription under acidic conditions","year":2003,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"ATP Synthase and ATPases Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":50,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"","keywords":"Oenococcus oeni; ATPase; Biochemistry; Biology; Enzyme; Messenger RNA; Protein subunit; Malic acid; Molecular biology; Chemistry; Gene; Lactic acid; Malolactic fermentation; Bacteria","score_opus":0.014722324634799848,"score_gpt":0.2582052324095417,"score_spread":0.24348290777474182,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1979810463","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99513626,0.0004282532,0.0028275587,0.0010183622,0.00009427395,0.00023382776,0.00012516597,0.000014421282,0.00012187677],"genre_scores_gemma":[0.9981362,0.00022064762,0.00023334459,0.0008650164,0.000085271095,0.000026867861,0.00030032106,0.000021127145,0.000111204936],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9987692,0.00026049884,0.00018707178,0.00040632844,0.00004820842,0.00032867215],"domain_scores_gemma":[0.99951553,0.00002486194,0.00007811636,0.0002551622,0.0000464736,0.000079863086],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014379238,0.00018415936,0.00019863891,0.000095789765,0.00013995652,0.000013090441,0.00010170417,0.00024313942,0.00005765175],"category_scores_gemma":[0.000030388212,0.00017986847,0.00010434464,0.00010743622,0.0005930572,0.000012571476,0.00003329301,0.00019992319,0.0000138401265],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000074230345,0.00007427322,0.00066080125,0.000017400416,0.000099305755,0.0000044030276,0.000051050334,0.0001581161,0.99608654,0.000084938016,0.0020257558,0.0006631853],"study_design_scores_gemma":[0.0008427363,0.00019087213,0.0011772385,0.000012506366,0.00003554146,0.00007440279,0.00014391878,0.000008929443,0.9837841,0.000042620723,0.013479669,0.00020745951],"about_ca_topic_score_codex":0.000056547604,"about_ca_topic_score_gemma":0.000012558088,"teacher_disagreement_score":0.012302435,"about_ca_system_score_codex":0.000022197655,"about_ca_system_score_gemma":0.000056561978,"threshold_uncertainty_score":0.7334823},"labels":[],"label_agreement":null},{"id":"W1980401895","doi":"10.1016/j.femsle.2004.10.043","title":"Characterization of<i>bdhA</i>, encoding the enzyme d-3-hydroxybutyrate dehydrogenase, from<i>Sinorhizobium</i>sp. strain NGR234","year":2004,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Amino Acid Enzymes and Metabolism","field":"Biochemistry, Genetics and Molecular Biology","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Waterloo; McGill University","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Sinorhizobium meliloti; Subcloning; EcoRV; Biology; Operon; Plasmid; Gene; Mutant; PBR322; Genetics; EcoRI","score_opus":0.005993497012378563,"score_gpt":0.19590398405134707,"score_spread":0.1899104870389685,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1980401895","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99285644,0.0007359196,0.0030664464,0.0015713201,0.0006325643,0.00027283863,0.0007463912,0.000024466297,0.00009358356],"genre_scores_gemma":[0.9895354,0.00022048118,0.000401862,0.006519051,0.00058597355,0.000023714216,0.0025734731,0.000038992315,0.00010107128],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.998456,0.0001250805,0.00040319725,0.00049855834,0.00006461656,0.00045252196],"domain_scores_gemma":[0.999065,0.000019447374,0.000269597,0.000525022,0.00005035112,0.000070584145],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00020744125,0.00029715116,0.00030321235,0.00005490538,0.00014225926,0.000022349277,0.0004319157,0.00025976537,0.000034460536],"category_scores_gemma":[0.00002934613,0.00023438656,0.00018841006,0.00012546053,0.00031737133,0.000011117793,0.00014510565,0.00019102724,0.000035665536],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000042108197,0.000039835846,0.00035754105,0.0000057613984,0.000118114825,0.0000061217493,0.00017241691,0.00013808075,0.99825174,0.000114581344,0.00052870956,0.00022499594],"study_design_scores_gemma":[0.0007925397,0.000064646,0.001622782,0.000016936538,0.00004922533,0.000044194487,0.000037472735,0.000002549394,0.95950615,0.00003082036,0.037568096,0.000264609],"about_ca_topic_score_codex":0.00012112951,"about_ca_topic_score_gemma":0.000048288835,"teacher_disagreement_score":0.038745604,"about_ca_system_score_codex":0.00002445673,"about_ca_system_score_gemma":0.000072640905,"threshold_uncertainty_score":0.95580065},"labels":[],"label_agreement":null},{"id":"W1982588729","doi":"10.1111/j.1574-6968.2001.tb10583.x","title":"Heat-labile proteases in molecular biology applications","year":2001,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Enzyme Production and Characterization","field":"Biochemistry, Genetics and Molecular Biology","cited_by":13,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Victoria","funders":"","keywords":"Thermolabile; Proteases; Protease; Psychrotrophic bacteria; Enzyme; Biochemistry; Biology; Bacteria; Thermophile; Chemistry; Genetics","score_opus":0.005102304489150948,"score_gpt":0.23665504911479607,"score_spread":0.23155274462564512,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1982588729","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9726891,0.00030054705,0.022217099,0.003978585,0.00016042042,0.00045572454,0.000025376323,0.000027763937,0.00014539332],"genre_scores_gemma":[0.99084616,0.000115548384,0.0009236715,0.005772115,0.00026301722,0.0003363098,0.001504003,0.000023224306,0.00021593668],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99901694,0.00009642047,0.00019795625,0.00042033682,0.000015866513,0.00025246872],"domain_scores_gemma":[0.9995991,0.0000048516104,0.000033123182,0.00029501933,0.000031448304,0.00003646705],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00008930777,0.00013679176,0.00012277428,0.00008664818,0.00004887261,0.000008477407,0.000152218,0.00016110431,0.000055484103],"category_scores_gemma":[0.000020962441,0.00013923716,0.000050058192,0.00015207045,0.00013159063,0.0000035822036,0.000055954828,0.000099744946,0.000050214094],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000027744056,0.000062637344,0.009833605,0.000004115654,0.00001530846,0.000002927676,0.00001277385,0.000043129392,0.98815256,0.00007174786,0.0010872714,0.00068617816],"study_design_scores_gemma":[0.0004040284,0.00006855725,0.0012321112,0.000004555914,0.0000051528386,0.000098185104,0.000013474458,0.0000037584848,0.67503923,0.000029384657,0.32291198,0.00018960616],"about_ca_topic_score_codex":0.000017183509,"about_ca_topic_score_gemma":0.000015606352,"teacher_disagreement_score":0.3218247,"about_ca_system_score_codex":0.000018398823,"about_ca_system_score_gemma":0.000021999715,"threshold_uncertainty_score":0.5677927},"labels":[],"label_agreement":null},{"id":"W1983345355","doi":"10.1016/j.femsle.2004.10.045","title":"Type III secretion system cluster 3 is required for maximal virulence of<i>Burkholderia pseudomallei</i>in a hamster infection model","year":2004,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Burkholderia infections and melioidosis","field":"Medicine","cited_by":116,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Health Sciences Centre; University of Calgary","funders":"","keywords":"Burkholderia pseudomallei; Virulence; Melioidosis; Microbiology; Biology; Pathogen; Type three secretion system; Ralstonia solanacearum; Burkholderia; Hamster; Pathogenicity island; Secretion; Effector; Virology; Bacteria; Gene; Genetics; Molecular biology; Immunology","score_opus":0.020152880309615265,"score_gpt":0.25380434724060635,"score_spread":0.2336514669309911,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1983345355","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.95338,0.000062359264,0.041943092,0.0024345398,0.0008992402,0.0010289999,0.0000377552,0.000083193394,0.00013085434],"genre_scores_gemma":[0.99185973,0.000030189989,0.0038584813,0.0036920107,0.00016041142,0.00013302625,0.00011878197,0.000036992475,0.00011034794],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9985594,0.00004542989,0.00051735324,0.0004385357,0.000055120276,0.00038416675],"domain_scores_gemma":[0.9992606,0.000030258383,0.00018993125,0.00032601622,0.000129062,0.00006412474],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00027617125,0.00023486176,0.0004826085,0.00030048483,0.00008165001,0.000011949303,0.00007609043,0.0003189417,0.000021652708],"category_scores_gemma":[0.000023647923,0.00021858564,0.00019012693,0.00027548114,0.00014715172,0.00012666741,0.000041180912,0.00015768885,0.00002859358],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00072895223,0.00011523459,0.0014961035,0.00023956878,0.00007828044,0.000005893853,0.0003938498,0.001821988,0.9928719,0.00014882543,0.0019818826,0.00011751629],"study_design_scores_gemma":[0.058835205,0.004664414,0.013801068,0.00413466,0.001214039,0.0036000907,0.0005068514,0.021059023,0.87799823,0.00026946122,0.011743711,0.0021732259],"about_ca_topic_score_codex":0.0003805178,"about_ca_topic_score_gemma":0.00004366097,"teacher_disagreement_score":0.11487365,"about_ca_system_score_codex":0.00028964426,"about_ca_system_score_gemma":0.000091501846,"threshold_uncertainty_score":0.8913664},"labels":[],"label_agreement":null},{"id":"W1984925862","doi":"10.1111/j.1574-6968.1997.tb10397.x","title":"Interaction between Actinobacillus actinomycetemcomitans lipopolysaccharides and human hemoglobin","year":2006,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Oral microbiology and periodontitis research","field":"Dentistry","cited_by":24,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"Medical Research Council; Medical Research Council Canada","keywords":"Actinobacillus; Hemoglobin; Bacteria; Microbiology; Chemistry; Sodium dodecyl sulfate; Gel electrophoresis; Polyacrylamide gel electrophoresis; Pasteurellaceae; Biochemistry; Biology; Antibiotics; Enzyme","score_opus":0.019490181194740705,"score_gpt":0.28320134141023995,"score_spread":0.26371116021549923,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1984925862","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99636716,0.00016295767,0.0000814467,0.0012925671,0.00075218483,0.00024066816,0.00022727883,0.00013579504,0.00073994865],"genre_scores_gemma":[0.996857,0.0000061426495,0.00016861105,0.0005506996,0.00060692505,0.000016401711,0.0005230903,0.000031839376,0.0012393286],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9980257,0.00027956316,0.00042384755,0.0005959964,0.000045697176,0.00062919594],"domain_scores_gemma":[0.9991964,0.00019282024,0.00017318346,0.0003226539,0.000041789288,0.00007316619],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00026789834,0.00030052644,0.0004262847,0.00021196285,0.00043531696,0.0001065431,0.00030437025,0.00037293567,0.0005466663],"category_scores_gemma":[0.000025119367,0.00029237458,0.00012648654,0.00014524095,0.00054516573,0.00022629306,0.00019334325,0.0006688662,0.00063251896],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000031643427,0.000023054517,0.29551005,0.000012406413,0.000060595703,0.000053887565,0.000027710494,0.0000012547683,0.6906981,0.000059508344,0.0129946275,0.0005271775],"study_design_scores_gemma":[0.0018227581,0.0001800373,0.5037424,0.00006209446,0.000077929435,0.001981783,0.00015931783,0.0000012874217,0.4147186,0.00010599975,0.07635087,0.0007969363],"about_ca_topic_score_codex":0.0020147432,"about_ca_topic_score_gemma":0.00083064643,"teacher_disagreement_score":0.2759795,"about_ca_system_score_codex":0.00012215223,"about_ca_system_score_gemma":0.000017413691,"threshold_uncertainty_score":0.99995285},"labels":[],"label_agreement":null},{"id":"W1985242678","doi":"10.1111/j.1574-6968.2000.tb09101.x","title":"Simple method to identify bacteriocin induction peptides and to auto-induce bacteriocin production at low cell density","year":2000,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Probiotics and Fermented Foods","field":"Agricultural and Biological Sciences","cited_by":9,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"Bacteriocin; Enterococcus faecium; Lactococcus lactis; Biology; Microbiology; Secretion; Bacteria; Gene; Transformation (genetics); Biochemistry; Lactic acid; Genetics; Antimicrobial","score_opus":0.012253514951532233,"score_gpt":0.23706176604602403,"score_spread":0.2248082510944918,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1985242678","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9904567,0.000014369759,0.000035599773,0.008565906,0.00030825814,0.0004599403,0.000058600202,0.00007252037,0.000028112045],"genre_scores_gemma":[0.9925744,0.0000132154855,0.0012899777,0.0049859905,0.00030534688,0.000017022201,0.00019075607,0.0000033287251,0.00061995623],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9983139,0.00019524118,0.0002627961,0.0007149944,0.000053901294,0.00045917407],"domain_scores_gemma":[0.9995664,0.000042264466,0.0000741355,0.000113352224,0.00003883565,0.0001650277],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00035804784,0.00023458354,0.0002583791,0.000038218066,0.00034510475,0.00007330059,0.00019564391,0.00018464401,0.00038064717],"category_scores_gemma":[0.000017700997,0.00012179017,0.00006922423,0.000286632,0.00007256064,0.00011341748,0.00015755708,0.00018370127,0.000321121],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000702095,0.000041082003,0.00224983,0.0000061875826,0.000013728598,0.0000031405966,0.00023822542,0.000013931239,0.96219987,6.4858784e-7,0.0031030336,0.032060105],"study_design_scores_gemma":[0.00011939845,0.00025693284,0.39501053,0.000020479853,0.000016900469,0.00008945001,0.00008191988,0.0000026540129,0.5670666,0.0000071420536,0.037001472,0.00032652883],"about_ca_topic_score_codex":0.0002585562,"about_ca_topic_score_gemma":0.0003257601,"teacher_disagreement_score":0.3951333,"about_ca_system_score_codex":0.00010487868,"about_ca_system_score_gemma":0.0000051241136,"threshold_uncertainty_score":0.4966459},"labels":[],"label_agreement":null},{"id":"W1985458451","doi":"10.1093/femsle/fnv016","title":"First draft genome sequence of Aureimonas altamirensis, isolated from patient blood culture","year":2015,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Genomics and Phylogenetic Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":13,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Toronto Public Health; University of Toronto; Public Health Ontario","funders":"","keywords":"Contig; Whole genome sequencing; Blood culture; Genome; Biology; Microbiology; Bacillus cereus; Cellulitis; Insertion sequence; Computational biology; Genetics; Bacteria; Gene; Transposable element; Immunology; Antibiotics","score_opus":0.011210941956326013,"score_gpt":0.20003034678437406,"score_spread":0.18881940482804804,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1985458451","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99345624,0.004446784,0.00008271297,0.0006381066,0.00044694575,0.00017871035,0.0006630617,0.000006941084,0.00008049262],"genre_scores_gemma":[0.995302,0.00025133215,0.0013015699,0.0019796297,0.00015784396,0.000012964982,0.0009063266,0.000022037233,0.00006629834],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9988435,0.0000650789,0.00029664292,0.00044778062,0.000042700245,0.00030427714],"domain_scores_gemma":[0.9992469,0.0000118216785,0.00017030143,0.00037157888,0.000113767754,0.000085633124],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00006690353,0.00023410817,0.00027638808,0.000033328233,0.00006773621,0.00000807225,0.00025414492,0.00022464302,0.000008700312],"category_scores_gemma":[0.00002953108,0.00020843554,0.00010653671,0.00006760302,0.00025675504,9.0153696e-7,0.00020952319,0.000105582694,0.000016361437],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000063313295,0.00004941506,0.004252356,0.0000051385546,0.00031497295,0.000009007172,0.00062765856,0.0002206898,0.98937315,0.000004354743,0.005036148,0.000043787077],"study_design_scores_gemma":[0.0020488757,0.0013145448,0.0040422,0.000029984247,0.00019047425,0.0001147395,0.0003035182,0.000017345623,0.662218,0.00009681532,0.32883167,0.0007918915],"about_ca_topic_score_codex":0.00019758323,"about_ca_topic_score_gemma":0.00010296954,"teacher_disagreement_score":0.3271552,"about_ca_system_score_codex":0.000016348598,"about_ca_system_score_gemma":0.000046549845,"threshold_uncertainty_score":0.8499754},"labels":[],"label_agreement":null},{"id":"W1985626817","doi":"10.1111/j.1574-6968.2000.tb09277.x","title":"Expression of the<i>tetA</i>(C) tetracycline efflux pump in<i>Escherichia coli</i>confers osmotic sensitivity","year":2000,"lang":"he","type":"article","venue":"FEMS Microbiology Letters","topic":"Bacterial Genetics and Biotechnology","field":"Biochemistry, Genetics and Molecular Biology","cited_by":34,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Robarts Clinical Trials; Western University","funders":"","keywords":"Tetracycline; Escherichia coli; Efflux; Osmotic shock; Aminoglycoside; Biology; Microbiology; Chemistry; Biochemistry; Antibiotics; Gene","score_opus":0.005083818710502302,"score_gpt":0.19643343661124674,"score_spread":0.19134961790074442,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1985626817","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9906872,0.00068238284,0.00003760125,0.0062348684,0.0012610595,0.00063014845,0.0002791545,0.00001630191,0.00017128758],"genre_scores_gemma":[0.9932326,0.0007909212,0.00033175992,0.0045515387,0.0003300081,0.000012204927,0.00019047018,0.00005627915,0.00050422363],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99645865,0.00075222977,0.00083846546,0.0009817962,0.00008612076,0.0008827367],"domain_scores_gemma":[0.9983117,0.00006826083,0.00035595178,0.0010987403,0.000067442525,0.0000978764],"candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.00045998965,0.00057003385,0.0007265972,0.000110765744,0.00014103438,0.000024955336,0.0006347118,0.0013808894,0.00032280036],"category_scores_gemma":[0.000078993,0.00046973285,0.00035829033,0.00034192958,0.0017187198,0.000006977088,0.00037067808,0.00071917806,0.00009124684],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00027789208,0.00025820165,0.0050989375,0.00005747998,0.00009119202,0.000018603483,0.00007882468,0.00020714276,0.9907901,0.000004847074,0.0017541957,0.0013625271],"study_design_scores_gemma":[0.0014488838,0.00026529087,0.014426065,0.00013477342,0.00006666337,0.0000853019,0.000039011542,0.000018343577,0.9399862,0.0000072424614,0.043042116,0.0004801113],"about_ca_topic_score_codex":0.00020404393,"about_ca_topic_score_gemma":0.00028779788,"teacher_disagreement_score":0.050803956,"about_ca_system_score_codex":0.000054805354,"about_ca_system_score_gemma":0.00015142869,"threshold_uncertainty_score":0.99991554},"labels":[],"label_agreement":null},{"id":"W1985796013","doi":"10.1111/j.1574-6968.2007.00745.x","title":"A subpopulation of<i>Candida albicans</i>and<i>Candida tropicalis</i>biofilm cells are highly tolerant to chelating agents","year":2007,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":47,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of Calgary","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Biofilm; Candida albicans; Candida tropicalis; Microbiology; Chelation; Biology; Corpus albicans; Population; Antimicrobial; Chemistry; Bacteria","score_opus":0.012329574226616829,"score_gpt":0.25735214114308647,"score_spread":0.24502256691646965,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1985796013","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99441516,0.0001224058,0.0014243476,0.0030599558,0.00027785078,0.000472313,0.00005687607,0.000042026266,0.00012907032],"genre_scores_gemma":[0.98772657,0.000011211468,0.0014243161,0.010370759,0.00014660256,0.000005692465,0.00008317462,0.000021835132,0.00020982556],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9983213,0.00005106863,0.00055389316,0.00047789037,0.00010337708,0.000492499],"domain_scores_gemma":[0.9990998,0.00011293451,0.00020451103,0.0003254262,0.000070559254,0.00018679933],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00035442406,0.00022757583,0.0005470382,0.00014752464,0.0000968059,0.000009640458,0.0001030137,0.00018974271,0.000073792864],"category_scores_gemma":[0.000073347175,0.00019594259,0.00013340433,0.00021967749,0.00020285198,0.00004703171,0.000053655844,0.00025389463,0.00002780114],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003479561,0.000042171407,0.32509562,0.000052055886,0.00004108818,0.000035690824,0.00027786143,0.0000057462985,0.6713549,0.00001187862,0.0022983681,0.0004366882],"study_design_scores_gemma":[0.0013903877,0.00021831915,0.8087053,0.00019254952,0.0000885755,0.00004125338,0.00020055694,0.000012114763,0.1806367,0.0000060643024,0.008253134,0.0002550823],"about_ca_topic_score_codex":0.00033134784,"about_ca_topic_score_gemma":0.00034104014,"teacher_disagreement_score":0.49071816,"about_ca_system_score_codex":0.000109215856,"about_ca_system_score_gemma":0.000029381572,"threshold_uncertainty_score":0.7990307},"labels":[],"label_agreement":null},{"id":"W1986592512","doi":"10.1111/j.1574-6968.1997.tb10217.x","title":"Comparison of the recombinant and authentic forms of the Pasteurella haemolytica A1 glycoprotease","year":2006,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Microbial infections and disease research","field":"Immunology and Microbiology","cited_by":16,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Microbiology; Polyclonal antibodies; Biology; Recombinant DNA; Monoclonal antibody; Escherichia coli; Pasteurella; Bacteria; Sialoglycoprotein; Virology; Antibody; Gene; Biochemistry; Immunology","score_opus":0.011259965132125063,"score_gpt":0.2560957979236514,"score_spread":0.24483583279152632,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1986592512","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9953317,0.0011433233,0.00004359735,0.0019902363,0.0007216372,0.0005157137,0.00007478221,0.000014206488,0.000164795],"genre_scores_gemma":[0.9988845,0.000009848146,0.000012417778,0.00025830415,0.000015944757,0.000013226165,0.000034617875,0.000012681349,0.0007584332],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9985697,0.0003268561,0.00045507614,0.0002574304,0.000023782248,0.00036713268],"domain_scores_gemma":[0.9990551,0.000120188415,0.00027394036,0.00047766292,0.00005656778,0.00001656117],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00021625335,0.00017419015,0.00036068747,0.000080247846,0.00028152313,0.000008605807,0.00035768046,0.00020364486,0.00014861904],"category_scores_gemma":[0.000044793822,0.000095512354,0.00020836211,0.00020654887,0.0014324331,0.000027273338,0.00028740373,0.0003466781,0.000033978744],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000065907865,0.00021617602,0.049442478,0.000037392172,0.00008029067,6.0625615e-7,0.000105432264,0.000012815925,0.93362623,0.0006448778,0.015532569,0.00023523385],"study_design_scores_gemma":[0.0015386334,0.00012260368,0.04036491,0.000114311646,0.000112722104,0.0001775501,0.000112287846,0.000006051563,0.94055337,0.00030881635,0.016390694,0.00019802668],"about_ca_topic_score_codex":0.00047056942,"about_ca_topic_score_gemma":0.00011004214,"teacher_disagreement_score":0.009077567,"about_ca_system_score_codex":0.000029939894,"about_ca_system_score_gemma":0.000055559085,"threshold_uncertainty_score":0.52778596},"labels":[],"label_agreement":null},{"id":"W1986712950","doi":"10.1016/s0378-1097(03)00693-1","title":"Effect of acid shock on protein expression by biofilm cells of<i>Streptococcus mutans</i>","year":2003,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Oral microbiology and periodontitis research","field":"Dentistry","cited_by":62,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba","funders":"","keywords":"Biofilm; Streptococcus mutans; Chemostat; Microbiology; Bacteria; In vitro; Cell; Chemistry; Amino acid; Dental plaque; Biology; Streptococcaceae; Biochemistry; Antibiotics","score_opus":0.006250174876400185,"score_gpt":0.24902741009302953,"score_spread":0.24277723521662936,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1986712950","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99676996,0.0003875157,0.000063534644,0.00011591652,0.00059896323,0.0009017342,0.0007618077,0.000037020094,0.00036356648],"genre_scores_gemma":[0.99840766,0.000008729763,0.00015201667,0.00035668426,0.00003323392,0.0000663278,0.00022317619,0.00003213221,0.00072003517],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9970454,0.0012900658,0.0004911135,0.0005437647,0.00007263197,0.0005570519],"domain_scores_gemma":[0.9988915,0.00018673805,0.00025832836,0.0005335895,0.000057532572,0.00007231192],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00055760983,0.00032804397,0.0006274831,0.00015793992,0.000098171826,0.00001176949,0.00041994828,0.0004849018,0.0012542515],"category_scores_gemma":[0.00011209073,0.00026288012,0.00020932555,0.00023377272,0.00060518895,0.000056908564,0.000082832914,0.00049714814,0.0005584149],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00038204546,0.00010143282,0.006580005,0.0001202187,0.00006671039,0.000038538965,0.000035670146,0.000004341379,0.9365352,0.000011963696,0.055881407,0.00024248939],"study_design_scores_gemma":[0.0013347829,0.0009172347,0.00013397975,0.00012555628,0.000015946694,0.000049017654,0.00000893587,2.2387582e-7,0.97826123,0.000002165503,0.018927421,0.00022348703],"about_ca_topic_score_codex":0.00003535634,"about_ca_topic_score_gemma":0.0000064618525,"teacher_disagreement_score":0.04172607,"about_ca_system_score_codex":0.000042762997,"about_ca_system_score_gemma":0.00003436234,"threshold_uncertainty_score":0.99998236},"labels":[],"label_agreement":null},{"id":"W1987066432","doi":"10.1111/j.1574-6968.2001.tb10638.x","title":"Variant toxin B and a functional toxin A produced by<i>Clostridium difficile</i>C34","year":2001,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Clostridium difficile and Clostridium perfringens research","field":"Medicine","cited_by":36,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University","funders":"","keywords":"Clostridium difficile toxin B; Toxin; Clostridium difficile toxin A; Microbiology; Enterotoxin; Clostridium difficile; GTPase; RAC1; Biology; Chemistry; Gene; Cell biology; Genetics; Escherichia coli; Signal transduction","score_opus":0.017008877649185714,"score_gpt":0.2434732760302345,"score_spread":0.2264643983810488,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1987066432","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9640468,0.000986682,0.00019936966,0.032934755,0.00042040882,0.0007381512,0.00013974303,0.00014581688,0.00038829967],"genre_scores_gemma":[0.98863274,0.00034916773,0.00018317095,0.007310932,0.0007324622,0.00008105811,0.0005262858,0.00006471802,0.0021194483],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9972693,0.00013464276,0.00048797528,0.00095718476,0.00020525831,0.0009456915],"domain_scores_gemma":[0.9987538,0.0001584356,0.00011060339,0.00054580293,0.00011344703,0.000317906],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00033059187,0.00042529096,0.0005841257,0.00025070005,0.00022561107,0.000051772222,0.0001643422,0.00029884782,0.00075961684],"category_scores_gemma":[0.00014933871,0.00037331152,0.00016653558,0.00043725152,0.00041183463,0.00007376436,0.00017545924,0.0006921981,0.00026856843],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00071811234,0.00032130128,0.0015756298,0.00003420817,0.00015516946,0.00031485216,0.00007383284,0.0000038102207,0.8483139,0.000019776871,0.14755769,0.0009117004],"study_design_scores_gemma":[0.004456434,0.0006175504,0.0017918674,0.00008164418,0.00013954859,0.0045220875,0.000101941354,0.0000494214,0.8407348,0.0000051607353,0.14694373,0.0005558194],"about_ca_topic_score_codex":0.00013037607,"about_ca_topic_score_gemma":0.000012271695,"teacher_disagreement_score":0.025623824,"about_ca_system_score_codex":0.00022321814,"about_ca_system_score_gemma":0.0001550249,"threshold_uncertainty_score":0.9998719},"labels":[],"label_agreement":null},{"id":"W1988315912","doi":"10.1111/j.1574-6968.2000.tb09039.x","title":"Novel growth characteristics and high rates of nitrate reduction of an<i>Escherichia coli</i>strain, LCB2048, that expresses only a periplasmic nitrate reductase","year":2000,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Wastewater Treatment and Nitrogen Removal","field":"Environmental Science","cited_by":18,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"Periplasmic space; Nitrate reductase; Nitrate; Escherichia coli; Biochemistry; Chemistry; Strain (injury); Mutant; Glycerol; Biology; Microbiology; Enzyme; Organic chemistry","score_opus":0.010167708004576632,"score_gpt":0.20044815752557163,"score_spread":0.190280449520995,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1988315912","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.998633,0.0000416696,0.0000113582355,0.00040174244,0.00013764092,0.0002494434,0.00045631407,0.000026525644,0.000042305768],"genre_scores_gemma":[0.99379015,0.000062718886,0.0052604754,0.00028713874,0.000049280916,0.000010535761,0.00036737288,0.000024211613,0.00014810682],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.998731,0.00009443296,0.000341524,0.00042849654,0.000067340516,0.00033720004],"domain_scores_gemma":[0.9994531,0.000019771607,0.00020855234,0.00022306514,0.000013692984,0.000081764185],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013649538,0.0002730818,0.00036223585,0.000053393735,0.00009293988,0.000019918873,0.00018166931,0.00012629514,0.00053233956],"category_scores_gemma":[0.0000036713277,0.00024066375,0.00006567981,0.00013439156,0.0008212666,0.00023664301,0.00004714695,0.0001350682,0.00003256078],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00022347846,0.00020582318,0.006824573,0.000020531337,0.0000683369,0.000012156767,0.00043621517,0.000028763274,0.99143517,0.000004642211,0.0002935698,0.0004467425],"study_design_scores_gemma":[0.00087742903,0.00022906116,0.05935518,0.000024690813,0.00007155115,0.00035844994,0.00010586379,0.000014037645,0.9386116,0.000026153144,0.0000835071,0.00024244816],"about_ca_topic_score_codex":0.0006265177,"about_ca_topic_score_gemma":0.0000133661915,"teacher_disagreement_score":0.05282354,"about_ca_system_score_codex":0.00004217526,"about_ca_system_score_gemma":0.000018083421,"threshold_uncertainty_score":0.9813983},"labels":[],"label_agreement":null},{"id":"W1988382137","doi":"10.1111/j.1574-6968.1997.tb10467.x","title":"Production of bleomycin N-acetyltransferase in Escherichia coli and Streptomyces verticillus","year":2006,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Enzyme Structure and Function","field":"Materials Science","cited_by":20,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"Escherichia coli; Bleomycin; Microbiology; Streptomyces; Acetyltransferase; Chemistry; Biology; Bacteria; Biochemistry; Genetics; Gene; Acetylation","score_opus":0.004893578594940522,"score_gpt":0.18963842318852808,"score_spread":0.18474484459358756,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1988382137","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9976832,0.00014334077,0.000106180836,0.0011286362,0.00068597385,0.00014700028,0.00001280768,0.000027786975,0.00006503706],"genre_scores_gemma":[0.9987754,0.0000074646637,0.0006011082,0.0004347936,0.00010290146,0.000007692102,0.00002386053,0.0000072366975,0.000039494415],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9992117,0.000074096555,0.00022655193,0.00026627126,0.000028547196,0.00019282807],"domain_scores_gemma":[0.9997591,0.000023071761,0.000057739933,0.00012116672,0.00002385506,0.000015115045],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014406285,0.00010717483,0.00017605211,0.00007339155,0.000039126182,0.000008960461,0.00006262575,0.00007781833,0.00006573383],"category_scores_gemma":[0.000016805852,0.00009400644,0.000021674472,0.0001145318,0.0002195196,0.00008170462,0.000015223614,0.000082130944,0.000009704677],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000053825963,0.000020253921,0.008088217,0.000019523733,0.0000036385811,0.0000027333372,0.00012784975,0.00019699315,0.9896199,0.000042606596,0.001752591,0.0000718274],"study_design_scores_gemma":[0.0003779911,0.000052987132,0.023885546,0.000015998985,0.00001055681,0.000017485443,0.000039910075,0.0000033246054,0.97460335,0.00003754935,0.0008514252,0.00010387872],"about_ca_topic_score_codex":0.0004676361,"about_ca_topic_score_gemma":0.00028939618,"teacher_disagreement_score":0.01579733,"about_ca_system_score_codex":0.000023423323,"about_ca_system_score_gemma":0.0000131121415,"threshold_uncertainty_score":0.38334715},"labels":[],"label_agreement":null},{"id":"W1988463834","doi":"10.1111/j.1574-6968.2006.00293.x","title":"Involvement of two related porins, OprD and OpdP, in the uptake of arginine by<i>Pseudomonas aeruginosa</i>","year":2006,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Bacterial Genetics and Biotechnology","field":"Biochemistry, Genetics and Molecular Biology","cited_by":41,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"Porin; Subfamily; Biology; Pseudomonas aeruginosa; Amino acid; Peptide sequence; Biochemistry; Genetics; Phylogenetic tree; Gene; Bacteria; Escherichia coli; Bacterial outer membrane","score_opus":0.004206319734230155,"score_gpt":0.19493060313724458,"score_spread":0.19072428340301442,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1988463834","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99576604,0.0015745236,0.00002380162,0.002064002,0.00017921113,0.00021127281,0.00009795718,0.0000052735195,0.00007789487],"genre_scores_gemma":[0.9977504,0.00023907206,0.0004435817,0.0009372009,0.000050504517,0.000010300529,0.00050185126,0.000011850607,0.000055262033],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9988876,0.00007638069,0.00044770545,0.0003081031,0.000033908076,0.00024629603],"domain_scores_gemma":[0.9994465,0.000012307624,0.0001903632,0.00030904784,0.000026009187,0.000015755617],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00025240058,0.00016429293,0.00024183554,0.00006419942,0.000025365433,0.000004847739,0.0002717616,0.00025094827,0.00000660322],"category_scores_gemma":[0.000009070233,0.00012626412,0.000058124846,0.000115322255,0.0004175667,0.0000017443139,0.00012338167,0.00013419654,0.000001160863],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000042214557,0.000084030726,0.0056508593,0.0000105216905,0.00003592378,0.0000034164377,0.0000320054,0.000011919759,0.98786587,0.00017793385,0.005658931,0.0004263821],"study_design_scores_gemma":[0.0013451542,0.00025740062,0.0065855044,0.000013048528,0.000018687506,0.00005222075,0.000041759406,0.0000015869564,0.94499767,0.00006752532,0.046466548,0.00015291439],"about_ca_topic_score_codex":0.00022219834,"about_ca_topic_score_gemma":0.00010381962,"teacher_disagreement_score":0.042868212,"about_ca_system_score_codex":0.000006761757,"about_ca_system_score_gemma":0.00001963584,"threshold_uncertainty_score":0.51489013},"labels":[],"label_agreement":null},{"id":"W1990916687","doi":"10.1111/j.1574-6968.1997.tb10441.x","title":"Isolation and characterization of an aluminum-sensitive mutant of Pseudomonas fluorescens","year":2006,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Aluminum toxicity and tolerance in plants and animals","field":"Agricultural and Biological Sciences","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Laurentian University","funders":"","keywords":"Pseudomonas fluorescens; Mutant; Mutagenesis; Wild type; Pseudomonadaceae; Pseudomonas; Pseudomonadales; Biochemistry; Biology; Molecular biology; Chemistry; Bacteria; Microbiology; Gene; Genetics","score_opus":0.0075977327750994805,"score_gpt":0.1846229991505953,"score_spread":0.17702526637549582,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1990916687","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99901587,0.00001146504,0.000027627755,0.00044294688,0.000054435433,0.00009199367,0.0003106444,0.000011997277,0.000033050324],"genre_scores_gemma":[0.9988768,0.000011184201,0.000112460955,0.00028721217,0.00012431307,0.0000012918283,0.00057326705,7.360467e-7,0.000012734699],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.999391,0.00005711089,0.00021957935,0.00017087211,0.00002933195,0.00013210492],"domain_scores_gemma":[0.9997048,0.00004620922,0.00016755016,0.000028871056,0.000034236193,0.000018339299],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00008720588,0.000089692054,0.00018197203,0.000013566801,0.00006257984,0.000007269,0.00006033502,0.000089371984,0.00002741253],"category_scores_gemma":[0.0000033615615,0.000041241976,0.00003532224,0.00007275003,0.00018631258,0.00008701074,0.000017251636,0.00005109798,0.0000018110854],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00004381471,0.000047284237,0.0056395964,0.000004114156,0.000007086438,0.0000029884986,0.00006321264,0.0000019027018,0.99198544,0.000076917546,0.00002369683,0.0021039383],"study_design_scores_gemma":[0.00011593436,0.00015184557,0.30621,0.00002092126,0.000008344734,0.000036369795,0.000047201796,0.000073662566,0.6928829,0.000026699341,0.0003302275,0.000095905845],"about_ca_topic_score_codex":0.0001871003,"about_ca_topic_score_gemma":0.000080623264,"teacher_disagreement_score":0.30057043,"about_ca_system_score_codex":0.0000044858084,"about_ca_system_score_gemma":0.000002090353,"threshold_uncertainty_score":0.1681799},"labels":[],"label_agreement":null},{"id":"W1991081822","doi":"10.1111/j.1574-6968.2002.tb11000.x","title":"Role of membranes in the activities of antimicrobial cationic peptides","year":2002,"lang":"en","type":"review","venue":"FEMS Microbiology Letters","topic":"Antimicrobial Peptides and Activities","field":"Immunology and Microbiology","cited_by":557,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"Cationic polymerization; Membrane; Antimicrobial peptides; Amphiphile; Antimicrobial; Chemistry; Biological membrane; Cytoplasm; Biophysics; Biochemistry; Biology; Peptide; Organic chemistry; Copolymer","score_opus":0.018905651564423975,"score_gpt":0.2440250761618394,"score_spread":0.22511942459741544,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1991081822","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.031014463,0.9663728,0.0000029527198,0.00016178249,0.0005079307,0.0008360358,0.00071773375,0.000029930292,0.0003563735],"genre_scores_gemma":[0.033691954,0.96444875,0.000052389998,0.00032054973,0.00008534447,0.000056573506,0.00088370277,0.000062485095,0.00039824698],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.99653316,0.0009876485,0.0012505843,0.00055568904,0.000032031392,0.0006409142],"domain_scores_gemma":[0.9972637,0.0008201015,0.0012010009,0.000663903,0.00003970968,0.0000115380135],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00041219755,0.0006571222,0.0025576337,0.0005546627,0.00013472434,0.000017283277,0.001093855,0.0008514026,0.00023378409],"category_scores_gemma":[0.000040662086,0.00046619735,0.0008470138,0.0003840453,0.0017050784,0.00012034642,0.00017295036,0.0009279943,0.00011988615],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000036019177,0.00031280864,0.00004128352,0.0049784896,0.0006914836,0.0000068221902,0.0015904856,0.0000062900594,0.9194934,0.00016398262,0.01143486,0.06124408],"study_design_scores_gemma":[0.0006352977,0.0001036157,0.000020961761,0.0047057997,0.0006609628,0.0008426142,0.0006601503,1.2676881e-7,0.035641067,0.000010716471,0.95602834,0.0006903619],"about_ca_topic_score_codex":0.00035549066,"about_ca_topic_score_gemma":0.0000880999,"teacher_disagreement_score":0.9445935,"about_ca_system_score_codex":0.00006738617,"about_ca_system_score_gemma":0.00012302415,"threshold_uncertainty_score":0.999779},"labels":[],"label_agreement":null},{"id":"W1991599818","doi":"10.1111/j.1574-6968.2001.tb10971.x","title":"Selection of peptides that bind to the core oligosaccharide of R-form LPS from a phage-displayed heptapeptide library","year":2001,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Monoclonal and Polyclonal Antibodies Research","field":"Medicine","cited_by":18,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"University of Calgary","keywords":"Biopanning; Phage display; Oligosaccharide; Mimotope; Peptide library; Molecular biology; Biology; Phagemid; Ligand (biochemistry); Lipopolysaccharide; Biochemistry; Bacteriophage; Chemistry; Peptide; Escherichia coli; Peptide sequence; Receptor; Gene","score_opus":0.029772001682558943,"score_gpt":0.2749620652787673,"score_spread":0.24519006359620837,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1991599818","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9841317,0.00024400307,0.00005265398,0.01428064,0.00016322163,0.0004069715,0.0002557457,0.000029084715,0.00043598443],"genre_scores_gemma":[0.9886123,0.00022171963,0.0009033678,0.007653074,0.00026776263,0.000017256945,0.00035684177,0.000024333462,0.0019433303],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99879503,0.00007102448,0.0003420252,0.00029304915,0.00011623246,0.00038265678],"domain_scores_gemma":[0.99917793,0.0002760688,0.00014112129,0.00025735958,0.00004429544,0.00010324979],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013727091,0.00019282511,0.00041582462,0.00017355781,0.00008775117,0.000008715911,0.00027392153,0.00011850406,0.0008182368],"category_scores_gemma":[0.000037520684,0.00012381558,0.00017806997,0.00031166195,0.0002859425,0.00008275878,0.00013956714,0.00029546634,0.000118587224],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00093536935,0.000060914204,0.15616038,0.000033077915,0.00018595344,0.000030041068,0.00038730103,0.0000070881924,0.7942086,0.000018114632,0.046868227,0.0011049145],"study_design_scores_gemma":[0.0010856632,0.0005333711,0.22848749,0.00021598756,0.00008985611,0.0003756856,0.000188567,0.000049946473,0.69496787,0.000042793283,0.07374656,0.00021619679],"about_ca_topic_score_codex":0.0009881499,"about_ca_topic_score_gemma":0.00020467018,"teacher_disagreement_score":0.09924072,"about_ca_system_score_codex":0.00002632716,"about_ca_system_score_gemma":0.00007281806,"threshold_uncertainty_score":0.89591193},"labels":[],"label_agreement":null},{"id":"W1992311251","doi":"10.1016/j.femsle.2004.12.027","title":"A carboxy-terminal domain of Tir from enterohemorrhagic<i>Escherichia coli</i>O157:H7 (EHEC O157:H7) required for efficient type III secretion","year":2005,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Escherichia coli research studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":20,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Health Sciences Centre; University of Calgary","funders":"","keywords":"Escherichia coli; Secretion; Microbiology; Terminal (telecommunication); Domain (mathematical analysis); Chemistry; Biology; Biochemistry; Gene; Computer science","score_opus":0.010007520452369653,"score_gpt":0.2502980780699251,"score_spread":0.24029055761755544,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1992311251","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9925808,0.0011053934,0.00258933,0.0020101443,0.00048017732,0.0007600175,0.00031231553,0.000030971947,0.00013090661],"genre_scores_gemma":[0.98747665,0.000096217525,0.007308735,0.00285853,0.00069621555,0.00013199745,0.0010927012,0.000052724896,0.0002862324],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9977059,0.00021707047,0.00050959364,0.0007486314,0.000109183304,0.0007096733],"domain_scores_gemma":[0.9988076,0.0000842828,0.00026748734,0.00053359004,0.00019510314,0.0001119485],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00034893188,0.00037418617,0.00049786345,0.00008924074,0.00015514069,0.000020241028,0.00045480145,0.00032842692,0.0000379282],"category_scores_gemma":[0.00011425612,0.00035658793,0.00023424934,0.00017075756,0.0004992584,0.0000068651893,0.00030166795,0.00022777791,0.00002221473],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0009401693,0.0001422307,0.0008312242,0.000037580292,0.00026784657,0.000008302756,0.0003068865,0.00016990637,0.9856322,0.000012538705,0.011322407,0.00032871458],"study_design_scores_gemma":[0.004541193,0.0011204609,0.0018728867,0.00007835469,0.00011964351,0.000040419094,0.0002446928,0.00053688086,0.8546346,0.000017206721,0.13605054,0.0007431399],"about_ca_topic_score_codex":0.00010615722,"about_ca_topic_score_gemma":0.000120277895,"teacher_disagreement_score":0.13099761,"about_ca_system_score_codex":0.00009500024,"about_ca_system_score_gemma":0.000113578375,"threshold_uncertainty_score":0.9998886},"labels":[],"label_agreement":null},{"id":"W1992353448","doi":"10.1111/j.1574-6968.2000.tb08870.x","title":"<i>Sinorhizobium meliloti</i>strain 1021<i>bioS</i>and<i>bdhA</i>gene transcriptions are both affected by biotin available in defined medium","year":2000,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Legume Nitrogen Fixing Symbiosis","field":"Agricultural and Biological Sciences","cited_by":20,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Waterloo","funders":"Natural Sciences and Engineering Research Council of Canada; Deutsche Forschungsgemeinschaft","keywords":"Sinorhizobium meliloti; Biotin; Biology; Immunogold labelling; Biochemistry; Gene; Molecular biology; Microbiology; Genetics; Mutant","score_opus":0.007532229098690616,"score_gpt":0.17287357569562223,"score_spread":0.16534134659693162,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1992353448","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9770893,0.0010664404,5.680859e-7,0.019202523,0.00026435734,0.00042980476,0.0015425798,0.00021156025,0.00019285841],"genre_scores_gemma":[0.98619354,0.000113597474,0.00026623273,0.010928909,0.00019370396,0.000047535643,0.0015186745,0.000009026726,0.0007288049],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9972152,0.0003645608,0.00049693877,0.0008838978,0.000099377816,0.000940027],"domain_scores_gemma":[0.9993151,0.00018260592,0.00014156294,0.000160146,0.000028551214,0.00017202849],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00033695897,0.0004480297,0.00052451965,0.000056513338,0.00026393455,0.00007157565,0.00046336168,0.00038618033,0.0029333255],"category_scores_gemma":[0.000028701023,0.00023552625,0.00016880251,0.0005957947,0.00030774763,0.00015029495,0.000050222236,0.00042122617,0.00069938943],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000045519293,0.00016603053,0.004784635,0.0000070028814,0.000037496215,0.000017609887,0.000078902856,2.977148e-7,0.8992516,0.0000022635754,0.09509411,0.000514551],"study_design_scores_gemma":[0.0015190243,0.00030615015,0.048352573,0.00008461112,0.000073015675,0.00016119007,0.00008604446,0.000001890211,0.84163886,0.000021184984,0.10673644,0.0010190448],"about_ca_topic_score_codex":0.0009786155,"about_ca_topic_score_gemma":0.0017695111,"teacher_disagreement_score":0.057612743,"about_ca_system_score_codex":0.00008023511,"about_ca_system_score_gemma":0.000015379379,"threshold_uncertainty_score":0.99797815},"labels":[],"label_agreement":null},{"id":"W1993000732","doi":"10.1111/j.1574-6968.2007.00972.x","title":"Survival of<i>Giardia lamblia</i>trophozoites after exposure to UV light","year":2007,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Parasitic Infections and Diagnostics","field":"Immunology and Microbiology","cited_by":21,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"Giardia lamblia; Giardia; Microbiology; Biology; In vitro; Biochemistry","score_opus":0.005644286279801781,"score_gpt":0.22270703937893974,"score_spread":0.21706275309913795,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1993000732","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9893298,0.0010148793,0.002587089,0.0011664083,0.003840003,0.00028753927,0.00016091381,0.000079085265,0.0015342562],"genre_scores_gemma":[0.9950785,0.00002085424,0.00049816555,0.0033659383,0.00015356335,0.000027051643,0.00014680989,0.000027167616,0.00068191695],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.998168,0.00015887985,0.00049855834,0.00041807303,0.00002219219,0.0007343012],"domain_scores_gemma":[0.9987383,0.0005511677,0.00012639901,0.0004262287,0.000103397346,0.000054545337],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.000471239,0.00028505042,0.0004730628,0.00042221675,0.00014464083,0.000009489927,0.00024147243,0.00041462824,0.00050005503],"category_scores_gemma":[0.00018230705,0.00025855657,0.00018984849,0.0003586462,0.0003007714,0.000049266633,0.00011338837,0.00031232767,0.0017337574],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00023335453,0.00010460453,0.07384035,0.0000103439415,0.00018605076,0.000045694815,0.0002746256,0.00001454238,0.9040299,0.00024603962,0.020754568,0.00025993056],"study_design_scores_gemma":[0.0013970757,0.00044407148,0.11837574,0.00005621728,0.000101198886,0.00029911308,0.00013384604,3.95844e-8,0.6304255,0.000013915983,0.24824898,0.00050431857],"about_ca_topic_score_codex":0.0000652692,"about_ca_topic_score_gemma":0.00011583537,"teacher_disagreement_score":0.27360442,"about_ca_system_score_codex":0.000052953164,"about_ca_system_score_gemma":0.000033236764,"threshold_uncertainty_score":0.99998665},"labels":[],"label_agreement":null},{"id":"W1996364851","doi":"10.1111/j.1574-6968.2000.tb09216.x","title":"<i>Candida glabrata</i>displays pseudohyphal growth","year":2000,"lang":"yi","type":"article","venue":"FEMS Microbiology Letters","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":114,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Biotechnology Research Institute","funders":"Medical Research Council; Medical Research Council Canada","keywords":"Candida glabrata; Hypha; Saccharomyces cerevisiae; Biology; Yeast; Microbiology; Filamentation; Agar; Ploidy; Ammonium; Biochemistry; Candida albicans; Chemistry; Bacteria; Genetics; Gene","score_opus":0.006448271847796969,"score_gpt":0.22365992521034725,"score_spread":0.21721165336255027,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1996364851","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9748144,0.003128145,0.000110999485,0.012834701,0.0013951553,0.00066736236,0.0005220582,0.00013138523,0.0063957768],"genre_scores_gemma":[0.95051503,0.0009582472,0.00023914583,0.03416433,0.0012136973,0.000018978015,0.000650659,0.000079403144,0.012160526],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.99573374,0.00038122793,0.00087993155,0.001314974,0.00016481527,0.0015252931],"domain_scores_gemma":[0.99812186,0.00022600009,0.00018773679,0.0009965665,0.00010316546,0.00036470042],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.0005167178,0.0007196388,0.0010909128,0.00015242927,0.00037194858,0.00005706926,0.0005257852,0.0006527925,0.010924844],"category_scores_gemma":[0.0000989296,0.00065047736,0.0004665955,0.00031731406,0.0013545043,0.00018194673,0.00008931318,0.0010784477,0.007856067],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0012022884,0.0002885945,0.08252427,0.00017069977,0.00032729172,0.0005411549,0.00052521634,0.0000034801542,0.72895235,0.000076489734,0.18323377,0.002154382],"study_design_scores_gemma":[0.020362493,0.0027345575,0.34217957,0.0018580041,0.002256289,0.0029796555,0.000963524,0.000087918794,0.110073544,0.00019465231,0.51150644,0.0048033474],"about_ca_topic_score_codex":0.00047596655,"about_ca_topic_score_gemma":0.00018777112,"teacher_disagreement_score":0.61887884,"about_ca_system_score_codex":0.00027907666,"about_ca_system_score_gemma":0.00022181631,"threshold_uncertainty_score":0.9995946},"labels":[],"label_agreement":null},{"id":"W1997102128","doi":"10.1111/j.1574-6968.1997.tb10268.x","title":"Utilization of alkaline phosphatase fusions to identify secreted proteins, including potential efflux proteins and virulence factors from Helicobacter pylori","year":2006,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Bacteriophages and microbial interactions","field":"Environmental Science","cited_by":23,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Victoria; University of British Columbia","funders":"","keywords":"Virulence; Biology; Gene; Helicobacter pylori; Efflux; Microbiology; Virulence factor; Phosphatase; Signal peptide; Genetics; Peptide sequence; Phosphorylation","score_opus":0.015754952891413068,"score_gpt":0.25512336288359794,"score_spread":0.23936840999218487,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1997102128","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99263394,0.000042007265,0.004475881,0.0007874673,0.00038159374,0.00072984,0.00088284194,0.00004715702,0.000019274614],"genre_scores_gemma":[0.99597514,0.0000122978045,0.0017667005,0.0008610841,0.00009214271,0.000033697168,0.0011426705,0.000022891141,0.00009337304],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99860823,0.00008704623,0.00039745754,0.0005024068,0.00006486715,0.0003399861],"domain_scores_gemma":[0.9994069,0.000033852833,0.00019847501,0.00025806867,0.000017024744,0.00008570728],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00009391052,0.00024113039,0.00025140686,0.00008544002,0.00022085641,0.000042113606,0.00022210363,0.0001415971,0.0012586284],"category_scores_gemma":[0.000025892798,0.0002215974,0.00007698002,0.00021361935,0.00024725217,0.00025037522,0.00038756413,0.0001750343,0.00016963127],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000038203994,0.000066563975,0.005245103,0.000006257934,0.000022224116,0.0000055689093,0.00019921781,0.000105942614,0.9922028,0.000004564723,0.0017746536,0.00032889302],"study_design_scores_gemma":[0.00038380414,0.00006368781,0.17863087,0.000052636657,0.000036007383,0.000016288395,0.000043127555,0.000030350171,0.81024003,0.000011630421,0.010238742,0.00025282247],"about_ca_topic_score_codex":0.0096392045,"about_ca_topic_score_gemma":0.0007209171,"teacher_disagreement_score":0.18196277,"about_ca_system_score_codex":0.000107581334,"about_ca_system_score_gemma":0.0000076910455,"threshold_uncertainty_score":0.99965435},"labels":[],"label_agreement":null},{"id":"W1997346743","doi":"10.1111/j.1574-6968.2000.tb09276.x","title":"Genomics of the 35-kb<i>pvd</i>locus and analysis of novel<i>pvdIJK</i>genes implicated in pyoverdine biosynthesis in<i>Pseudomonas aeruginosa</i>","year":2000,"lang":"yi","type":"article","venue":"FEMS Microbiology Letters","topic":"Vibrio bacteria research studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":72,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"Medical Research Council; Federation of European Microbiological Societies","keywords":"Pyoverdine; Siderophore; Biology; Mutant; Virulence; Gene; Locus (genetics); Microbiology; Pseudomonas aeruginosa; Genetics; Bacteria","score_opus":0.007870448426049463,"score_gpt":0.22568724894315148,"score_spread":0.217816800517102,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1997346743","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9886537,0.0061984165,0.000016637496,0.0029616284,0.00011833925,0.0005518089,0.0014275047,0.0000060799807,0.00006586363],"genre_scores_gemma":[0.99179965,0.006710507,0.00021154554,0.0008539607,0.000059522717,0.000029056886,0.0002230108,0.00003896541,0.00007375521],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99674815,0.0003799424,0.0010320564,0.0009300436,0.00009873207,0.0008110854],"domain_scores_gemma":[0.9983508,0.00015455842,0.00040440037,0.00092860404,0.00008103336,0.00008058242],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00048295144,0.00050387316,0.0012359356,0.00048304198,0.00008909866,0.000018676814,0.00074657245,0.0004794425,0.00006871565],"category_scores_gemma":[0.00009326962,0.00042156305,0.0004193403,0.0011228507,0.00145927,0.000010843587,0.0005966522,0.00031841762,0.0000032839193],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00041573658,0.00026861104,0.07521875,0.00006000316,0.0017609999,0.000007667496,0.00028710783,0.0004654007,0.91765004,0.0000030041822,0.0002710192,0.0035916262],"study_design_scores_gemma":[0.002006985,0.00016341839,0.10861683,0.000087163535,0.00054084754,0.000031857096,0.00010059561,0.00008644961,0.87702316,0.0000020219438,0.010872348,0.00046830616],"about_ca_topic_score_codex":0.00094609446,"about_ca_topic_score_gemma":0.001548056,"teacher_disagreement_score":0.04062689,"about_ca_system_score_codex":0.00011193365,"about_ca_system_score_gemma":0.0001350186,"threshold_uncertainty_score":0.99982363},"labels":[],"label_agreement":null},{"id":"W1997625271","doi":"10.1111/j.1574-6968.2011.02402.x","title":"Passage through Tetrahymena tropicalis enhances the resistance to stress and the infectivity of Legionella pneumophila","year":2011,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Legionella and Acanthamoeba research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":48,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University","funders":"","keywords":"Legionella pneumophila; Microbiology; Biology; Infectivity; Legionella; Candida tropicalis; Bacteria; Ciliate; Population; Virology; Ecology; Virus; Medicine","score_opus":0.01302823757037489,"score_gpt":0.2331261698784714,"score_spread":0.22009793230809652,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1997625271","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99034494,0.0006066644,0.00042502955,0.0073415022,0.00012664722,0.0003154971,0.000041766492,0.0000064174433,0.0007915187],"genre_scores_gemma":[0.996335,0.00029072713,0.00012782584,0.0028405632,0.00013051336,0.000036438178,0.000017837338,0.000011863252,0.00020919715],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9988561,0.00027760648,0.00018941324,0.00033367515,0.000052293126,0.00029085603],"domain_scores_gemma":[0.9993233,0.00009262575,0.000087921864,0.00041776945,0.000041994448,0.000036378886],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00025060188,0.00015078133,0.00019778917,0.000023085044,0.00015771622,0.000013257328,0.00037082945,0.00010893417,0.0000048108122],"category_scores_gemma":[0.00006558042,0.0000824201,0.00008545519,0.00010327227,0.0012457798,0.0000050242998,0.00020871058,0.00016808396,0.0000050830995],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00030177835,0.000033706594,0.0040852055,0.000015463693,0.00007518236,0.0000031746092,0.00069711445,0.0000017100324,0.98889947,0.00047389543,0.0053398316,0.000073441726],"study_design_scores_gemma":[0.000758492,0.00012139088,0.008843329,0.000023961387,0.000019731979,0.00001825455,0.00014207241,4.0697842e-7,0.9661823,0.00018854604,0.023543384,0.0001581109],"about_ca_topic_score_codex":0.00020143473,"about_ca_topic_score_gemma":0.0003097089,"teacher_disagreement_score":0.022717176,"about_ca_system_score_codex":0.000007585039,"about_ca_system_score_gemma":0.000022232643,"threshold_uncertainty_score":0.45901275},"labels":[],"label_agreement":null},{"id":"W1997953781","doi":"10.1016/s0378-1097(03)00088-0","title":"Identification and characterization of four proteases produced by<i>Streptococcus suis</i>","year":2003,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Peptidase Inhibition and Analysis","field":"Medicine","cited_by":49,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"","keywords":"Proteases; Streptococcus suis; Microbiology; Aminopeptidase; Serotype; Zymography; Biology; Pathogen; Chymotrypsin; Biochemistry; Virulence; Enzyme; Trypsin; Amino acid","score_opus":0.008695571883936748,"score_gpt":0.21969284922138335,"score_spread":0.2109972773374466,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1997953781","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9955868,0.000022951308,0.00040764094,0.0034413715,0.0000282656,0.00040549666,0.00006264049,0.000027007996,0.000017819762],"genre_scores_gemma":[0.99742544,0.000009256407,0.00004149349,0.0016764416,0.000028540404,0.000038016577,0.00044812585,0.000009078538,0.00032359117],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99927473,0.00008071334,0.00024777398,0.00023883507,0.0000327585,0.00012516083],"domain_scores_gemma":[0.9995657,0.000012014993,0.00016137153,0.00016261777,0.000057437304,0.00004085306],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012748732,0.000095301584,0.00019148052,0.000095333016,0.00004033499,0.00000785326,0.000027356169,0.00006314373,0.000073184885],"category_scores_gemma":[0.00006342448,0.000085418586,0.0000506186,0.00012667177,0.00011782234,0.000049096423,0.0000074800864,0.00007005853,0.000016306203],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000144032365,0.000059830018,0.017617943,0.000037660666,0.00003926959,0.0000029179312,0.000038521674,1.2279588e-7,0.97999275,0.000013725012,0.0020628083,0.000120075085],"study_design_scores_gemma":[0.0005282057,0.000035955458,0.012781382,0.0000678247,0.00004646354,0.000036874066,0.000012888765,0.0000026907635,0.98383385,0.000002445679,0.002571184,0.000080252394],"about_ca_topic_score_codex":0.000003838051,"about_ca_topic_score_gemma":6.111635e-7,"teacher_disagreement_score":0.004836561,"about_ca_system_score_codex":0.000017399796,"about_ca_system_score_gemma":0.00001801054,"threshold_uncertainty_score":0.3483269},"labels":[],"label_agreement":null},{"id":"W1998627160","doi":"10.1016/s0378-1097(03)00247-7","title":"Identification, cloning and characterization of<i>rfaE</i>of<i>Actinobacillus pleuropneumoniae</i>serotype 1, a gene involved in lipopolysaccharide inner-core biosynthesis","year":2003,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Microbial infections and disease research","field":"Immunology and Microbiology","cited_by":11,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université du Québec à Trois-Rivières; Université de Montréal","funders":"","keywords":"Actinobacillus pleuropneumoniae; Complementation; Salmonella enterica; Biology; Microbiology; Mutant; Virulence; Novobiocin; Salmonella; Gene; Lipid A; Molecular biology; Escherichia coli; Serotype; Genetics; Bacteria","score_opus":0.015671390872670478,"score_gpt":0.23264205905718097,"score_spread":0.2169706681845105,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1998627160","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9977886,0.0006136266,0.00030446588,0.00026533092,0.00040890233,0.00036491724,0.00020380509,0.000032068157,0.000018277058],"genre_scores_gemma":[0.99894226,0.0002721448,0.00009075571,0.0002675826,0.000015038047,0.000027429684,0.0002826527,0.000025352942,0.000076794844],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99792594,0.0004383958,0.00071046484,0.00047046522,0.000024978317,0.00042975572],"domain_scores_gemma":[0.998937,0.00016401631,0.0003733939,0.00036493829,0.0001252666,0.000035368572],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005066591,0.00023765724,0.0004689457,0.00047088435,0.00013360062,0.000014244875,0.00019278938,0.00027741594,0.00015334248],"category_scores_gemma":[0.0002102297,0.00023577051,0.00009964196,0.00038697245,0.00053299905,0.000117472664,0.00008308025,0.00028878733,0.0000541548],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009135255,0.00014392516,0.047134224,0.0000493021,0.000108340675,0.0000044635376,0.00024785753,0.000005314717,0.95148134,0.00036470767,0.00011175641,0.00025739954],"study_design_scores_gemma":[0.0007554283,0.00005760769,0.012303583,0.00005161961,0.000038446193,0.000096873315,0.0000751279,0.000002017432,0.98500764,0.000021796443,0.0013809653,0.00020889335],"about_ca_topic_score_codex":0.0002304752,"about_ca_topic_score_gemma":0.00006237853,"teacher_disagreement_score":0.03483064,"about_ca_system_score_codex":0.000048850303,"about_ca_system_score_gemma":0.00008273504,"threshold_uncertainty_score":0.9614442},"labels":[],"label_agreement":null},{"id":"W1999913434","doi":"10.1111/j.1574-6968.2000.tb08909.x","title":"Construction of mini-Tn<i>10luxABcam/Ptac</i>-ATS and its use for developing a bacteriophage that transduces bioluminescence to<i>Escherichia coli</i>O157:H7","year":2000,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Bacteriophages and microbial interactions","field":"Environmental Science","cited_by":61,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Health Canada","funders":"","keywords":"Escherichia coli; Bacteriophage; Vibrio harveyi; Biology; Microbiology; Bioluminescence; Plasmid; Prophage; Lysogenic cycle; Transposable element; Luciferase; Shuttle vector; Molecular biology; Virology; Bacteria; Vibrio; Genetics; Gene; Mutant; Vector (molecular biology); Biochemistry; Recombinant DNA","score_opus":0.017479350146271017,"score_gpt":0.22492603526733948,"score_spread":0.20744668512106845,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1999913434","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9957465,0.000038698352,0.0005361328,0.0022273366,0.00046196085,0.00063374685,0.00027844307,0.0000371003,0.000040091916],"genre_scores_gemma":[0.9795553,0.000106513544,0.014910162,0.0048150495,0.000054320008,0.000053544547,0.000078354824,0.00002739985,0.0003993434],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99855757,0.000068444446,0.00035730307,0.0005383914,0.000039119663,0.00043914712],"domain_scores_gemma":[0.99947333,0.00009601283,0.00013446684,0.0001858744,0.000018720382,0.00009161917],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00011020483,0.00027045805,0.0003345658,0.000065349755,0.00018286704,0.00005419173,0.00022116819,0.00014660845,0.00074193097],"category_scores_gemma":[0.000018624316,0.00026391013,0.00010064183,0.00019565683,0.0003529033,0.00039202953,0.00006601668,0.00013323418,0.00011375969],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011890158,0.00003080405,0.0014730031,0.000023144656,0.000032917993,0.0000031492934,0.00047042186,0.000010252544,0.99335283,0.0000072393395,0.0013310418,0.0031462798],"study_design_scores_gemma":[0.00080203713,0.00015619757,0.08833163,0.000106806634,0.000055731332,0.00019531332,0.00007432336,0.000016393313,0.76967615,0.000003322424,0.14005686,0.00052522175],"about_ca_topic_score_codex":0.00023734178,"about_ca_topic_score_gemma":0.0001492796,"teacher_disagreement_score":0.22367668,"about_ca_system_score_codex":0.000082141596,"about_ca_system_score_gemma":0.00001530989,"threshold_uncertainty_score":0.9999813},"labels":[],"label_agreement":null},{"id":"W2000025323","doi":"10.1016/j.femsle.2005.09.043","title":"Genome-wide expression analysis of iron regulation in<i>Burkholderia pseudomallei</i>and<i>Burkholderia mallei</i>using DNA microarrays","year":2005,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Burkholderia infections and melioidosis","field":"Medicine","cited_by":52,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Health Sciences Centre; University of Calgary","funders":"National Institute of Allergy and Infectious Diseases","keywords":"Burkholderia pseudomallei; Biology; Burkholderia; DNA microarray; Gene; Siderophore; Microbiology; Hemin; Gene expression; Bacteria; Microarray analysis techniques; Heme; Enzyme; Genetics; Biochemistry","score_opus":0.012993132773106089,"score_gpt":0.23753638256764845,"score_spread":0.22454324979454235,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2000025323","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99445355,0.0004587554,0.0019586934,0.0020843318,0.00026771857,0.00054728735,0.000034238823,0.000068239984,0.00012721033],"genre_scores_gemma":[0.99020755,0.00013613331,0.006659937,0.0022806139,0.0002337766,0.000029125571,0.0003106428,0.000048579433,0.00009365824],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99760914,0.00016328233,0.00086110854,0.0007100271,0.00009927106,0.00055715675],"domain_scores_gemma":[0.9987268,0.0001020121,0.0003678888,0.00058001396,0.00008462841,0.00013865497],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00040231293,0.00038342774,0.00097515946,0.0012527982,0.00013575093,0.00002272816,0.0001458768,0.000378332,0.00035985472],"category_scores_gemma":[0.00004484333,0.00036574897,0.0003086667,0.0009923669,0.0003147372,0.00017925813,0.00011575515,0.00031468854,0.000013691766],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00017559991,0.0001783602,0.04602858,0.000055716224,0.0003595691,0.000009997268,0.00046936612,0.0023638147,0.94958365,0.0000070111405,0.00049120514,0.0002771114],"study_design_scores_gemma":[0.003498674,0.00016136181,0.45209315,0.00020417119,0.0015018127,0.00017956593,0.00015896925,0.00083801505,0.53197837,0.0000039768993,0.00883037,0.0005515366],"about_ca_topic_score_codex":0.00013878425,"about_ca_topic_score_gemma":0.00009930399,"teacher_disagreement_score":0.41760528,"about_ca_system_score_codex":0.00021026445,"about_ca_system_score_gemma":0.000050601655,"threshold_uncertainty_score":0.9998794},"labels":[],"label_agreement":null},{"id":"W2000184787","doi":"10.1016/s0378-1097(03)00923-6","title":"The Mig protein of<i>Streptococcus dysgalactiae</i>inhibits bacterial internalization into bovine mammary gland epithelial cells","year":2003,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Streptococcal Infections and Treatments","field":"Medicine","cited_by":18,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"","keywords":"Internalization; Streptococcus dysgalactiae; Microbiology; Biology; Mammary gland; Mutant; Adhesion; Strain (injury); Epithelium; Cell biology; Streptococcus; Bacteria; Chemistry; Cell; Biochemistry; Gene; Anatomy; Genetics","score_opus":0.0065441264820994775,"score_gpt":0.22638740858315712,"score_spread":0.21984328210105764,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2000184787","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9946157,0.00009443494,0.00182994,0.0010246678,0.00090009335,0.0010962599,0.000032032713,0.00004489889,0.0003619803],"genre_scores_gemma":[0.9979081,0.000023154731,0.0005803571,0.0005153123,0.00017444765,0.00012379425,0.0001332528,0.000024810734,0.00051673036],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99876076,0.00018177602,0.00039356304,0.00031404893,0.00005324259,0.00029662493],"domain_scores_gemma":[0.9992106,0.000075372875,0.00020467817,0.00036205183,0.000075055985,0.00007221636],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015621418,0.00022119294,0.00029946002,0.00008848082,0.00015034062,0.000026185395,0.00010627909,0.0001452396,0.00012848871],"category_scores_gemma":[0.000058585734,0.00014847657,0.00014981358,0.00015144165,0.00022644308,0.00006417791,0.00004434331,0.0001778352,0.00006751812],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00024458932,0.00014111697,0.019839685,0.00002304296,0.00021760896,0.000020968866,0.00008309106,0.0000013256678,0.97665966,0.00015217699,0.0017638198,0.0008529376],"study_design_scores_gemma":[0.0025411092,0.00045519954,0.0024319605,0.00006964827,0.000075847536,0.00013144824,0.000016692282,0.000002710072,0.95068604,0.000051478084,0.043392967,0.00014490612],"about_ca_topic_score_codex":0.000107283624,"about_ca_topic_score_gemma":0.000039459435,"teacher_disagreement_score":0.041629147,"about_ca_system_score_codex":0.000089673296,"about_ca_system_score_gemma":0.000064394684,"threshold_uncertainty_score":0.6054699},"labels":[],"label_agreement":null},{"id":"W2002006497","doi":"10.1016/s0378-1097(03)00956-x","title":"Production of heterologous protein by<i>Methylobacterium extorquens</i>in high cell density fermentation","year":2004,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Microbial Metabolic Engineering and Bioproduction","field":"Biochemistry, Genetics and Molecular Biology","cited_by":53,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"National Research Council Canada; Biotechnology Research Institute; McGill University","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Heterologous; Methylobacterium; Fermentation; Chemistry; Yeast; Biochemistry; Gene","score_opus":0.002836837142007742,"score_gpt":0.18019478658073046,"score_spread":0.1773579494387227,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2002006497","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9969227,0.00017007349,0.0008200697,0.00091158174,0.00077659404,0.0003531211,0.000023836788,0.00001870856,0.000003354266],"genre_scores_gemma":[0.99726576,0.000032331518,0.0014472555,0.00036412303,0.00021298477,0.000022003795,0.000516473,0.000017926213,0.00012116653],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99892956,0.0000777097,0.0002673869,0.000443075,0.000030911833,0.00025135212],"domain_scores_gemma":[0.99954706,9.422398e-7,0.00012922914,0.0002548672,0.0000407774,0.000027093223],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00017516167,0.00017329822,0.00019507892,0.000075121294,0.000032706026,0.0000056060658,0.000110592395,0.00018257304,0.000003527459],"category_scores_gemma":[0.000025019011,0.00017358002,0.00005691177,0.000104865336,0.000121479694,0.0000064153883,0.00003859552,0.00012188849,0.000007074765],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009357411,0.00010158671,0.00059207965,0.000028900595,0.000018123197,0.0000014730869,0.000043027165,0.00061334687,0.9975026,0.0000027135638,0.00087271974,0.00012982247],"study_design_scores_gemma":[0.00064601476,0.00015597732,0.0038864587,0.000014616592,0.000009806082,0.000040838968,0.000009593461,1.450637e-7,0.99360883,0.0000073546453,0.0014563036,0.00016404713],"about_ca_topic_score_codex":0.00017290376,"about_ca_topic_score_gemma":0.000025443513,"teacher_disagreement_score":0.0038937891,"about_ca_system_score_codex":0.000043277065,"about_ca_system_score_gemma":0.000019734409,"threshold_uncertainty_score":0.7078387},"labels":[],"label_agreement":null},{"id":"W2002360137","doi":"10.1111/j.1574-6968.2007.00806.x","title":"A hyperconserved protein in<i>Prochlorococcus</i>and marine<i>Synechococcus</i>","year":2007,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Genomics and Phylogenetic Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University","funders":"","keywords":"Prochlorococcus; Synechococcus; Biology; Genome; Genetics; Gene; Nucleic acid; Most recent common ancestor; Amino acid; Evolutionary biology; Cyanobacteria; Bacteria","score_opus":0.0057560303244001375,"score_gpt":0.2008410110063653,"score_spread":0.19508498068196517,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2002360137","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9974968,0.000559679,0.00013554808,0.00086279016,0.00013703358,0.0004114173,0.0000221498,0.0000073462274,0.00036726388],"genre_scores_gemma":[0.9938446,0.00007247642,0.001731559,0.003909938,0.00014216335,0.000040922718,0.00007111047,0.000025065307,0.00016215935],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99868065,0.000045596546,0.0002885273,0.0004808662,0.00002647573,0.00047789633],"domain_scores_gemma":[0.9995464,0.000023408813,0.000072200855,0.00026265244,0.000029050645,0.00006625897],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00034951657,0.0002279572,0.00022150886,0.00008311245,0.00007470919,0.000012388058,0.00017934153,0.0001930885,0.0000072586736],"category_scores_gemma":[0.000039361257,0.00021929393,0.00006364278,0.00008604587,0.00022598458,0.0000010055286,0.00028177962,0.00013883981,0.000011181852],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000098477816,0.00002903059,0.060047872,0.000011109473,0.000042475804,0.000013900127,0.000065100154,0.0000031093266,0.9378872,0.000019621453,0.00073914987,0.0010429886],"study_design_scores_gemma":[0.0016957157,0.0002318617,0.11647334,0.00002048497,0.00001691684,0.00013065663,0.00010623254,0.0000013561981,0.763702,0.000076488024,0.11699033,0.00055463024],"about_ca_topic_score_codex":0.0000972704,"about_ca_topic_score_gemma":0.0006754812,"teacher_disagreement_score":0.17418517,"about_ca_system_score_codex":0.000017798924,"about_ca_system_score_gemma":0.00002428404,"threshold_uncertainty_score":0.8942547},"labels":[],"label_agreement":null},{"id":"W2002422062","doi":"10.1111/j.1574-6968.2002.tb11060.x","title":"FlaK of the archaeon<i>Methanococcus maripaludis</i>possesses preflagellin peptidase activity.","year":2002,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Protist diversity and phylogeny","field":"Biochemistry, Genetics and Molecular Biology","cited_by":93,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Queen's University","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Methanococcus; Biochemistry; Biology; Enzyme; Membrane; Collodion; Escherichia coli; Chemistry; Molecular biology; Gene","score_opus":0.011919689735702689,"score_gpt":0.19588945158339427,"score_spread":0.1839697618476916,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2002422062","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99642813,0.000409574,0.00036945424,0.0015449785,0.00033856576,0.0002869771,0.0001732687,0.000011120734,0.00043791434],"genre_scores_gemma":[0.9966659,0.0000859177,0.00021229922,0.0018868472,0.0001324256,0.000012281018,0.000049459417,0.000014172246,0.000940686],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9988999,0.00020815742,0.00016022226,0.00036520488,0.00004730962,0.0003192461],"domain_scores_gemma":[0.99921876,0.000030046454,0.00014576755,0.0005213895,0.00003742857,0.00004663379],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012062851,0.00018977173,0.0001936322,0.000040341794,0.00013058782,0.000008230446,0.00052843813,0.00019971965,0.0001351634],"category_scores_gemma":[0.000044574314,0.00015182079,0.00018931761,0.00010991059,0.00059478206,0.000004755275,0.00034659824,0.00018592918,0.000041746596],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00005118366,0.000072768715,0.013420076,0.000022446628,0.000091478134,0.0000050042654,0.000117187235,0.0000319581,0.9700919,0.000008634786,0.015502134,0.00058526726],"study_design_scores_gemma":[0.0004689711,0.00010657361,0.009681635,0.000014907067,0.00003097626,0.00004402082,0.000013929193,0.0000044386425,0.9665697,0.000016656468,0.022849998,0.00019815932],"about_ca_topic_score_codex":0.000040359377,"about_ca_topic_score_gemma":0.00004571991,"teacher_disagreement_score":0.007347864,"about_ca_system_score_codex":0.000013197643,"about_ca_system_score_gemma":0.000018066445,"threshold_uncertainty_score":0.61910725},"labels":[],"label_agreement":null},{"id":"W2002487744","doi":"10.1111/j.1574-6968.2001.tb10574.x","title":"Chlamydia pneumoniae and atherosclerosis: does the evidence support a causal or contributory role?","year":2001,"lang":"en","type":"review","venue":"FEMS Microbiology Letters","topic":"Reproductive tract infections research","field":"Immunology and Microbiology","cited_by":58,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"St. Joseph’s Healthcare Hamilton; McMaster University; St. Joseph's Hospital","funders":"Canadian Institutes of Health Research","keywords":"Immune system; Chlamydia; Inflammation; Immunology; Chlamydophila pneumoniae; Chemokine; Biology; Crosstalk; Medicine; Chlamydiaceae","score_opus":0.056718538111445505,"score_gpt":0.3300158165202617,"score_spread":0.2732972784088162,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2002487744","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.010527287,0.9827172,0.0000137417055,0.0018195484,0.002040733,0.0022442238,0.0004280518,0.00016118874,0.00004802714],"genre_scores_gemma":[0.0007627739,0.9932499,0.000011621501,0.00073437166,0.00034029654,0.0007578985,0.00042699708,0.000103543076,0.0036125903],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99367595,0.0023509057,0.0009739197,0.0015266414,0.000048903254,0.0014237025],"domain_scores_gemma":[0.9954787,0.0023482062,0.0005877308,0.0013667473,0.00015694457,0.00006168773],"candidate_categories":["metaepi_narrow","research_integrity","insufficient_payload"],"consensus_categories":["research_integrity","insufficient_payload"],"category_scores_codex":[0.001630132,0.0009152451,0.0021112163,0.00038837886,0.0008258827,0.000096940836,0.0010709368,0.0013047211,0.0012381168],"category_scores_gemma":[0.00077350636,0.00046329666,0.0005114555,0.00051666197,0.002472331,0.00018495692,0.00057409966,0.002499889,0.002320946],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00018406376,0.00025834717,0.0016339741,0.0017963095,0.0034845485,0.00010316906,0.0005840786,6.179044e-7,0.44869655,0.000041254436,0.036390483,0.5068266],"study_design_scores_gemma":[0.0004072748,0.00021433945,0.00038397894,0.00197074,0.0006582686,0.0045677554,0.00007710916,2.4423477e-8,0.0004597418,0.0000034296972,0.9906702,0.00058711594],"about_ca_topic_score_codex":0.0002347286,"about_ca_topic_score_gemma":0.00017951825,"teacher_disagreement_score":0.9542797,"about_ca_system_score_codex":0.00033548367,"about_ca_system_score_gemma":0.00054673397,"threshold_uncertainty_score":0.9999918},"labels":[],"label_agreement":null},{"id":"W2002498973","doi":"10.1111/1574-6968.12571","title":"Microbial weeds in hypersaline habitats: the enigma of the weed-like<i>Haloferax mediterranei</i>","year":2014,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Microbial Community Ecology and Physiology","field":"Environmental Science","cited_by":71,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Queen's University; Queen's University Belfast","keywords":"Halophile; Archaea; Biology; Microbial ecology; Ecology; Weed; Haloferax volcanii; Botany; Bacteria","score_opus":0.005456308402581131,"score_gpt":0.1837969764476871,"score_spread":0.17834066804510598,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2002498973","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98240715,0.000037735223,0.000045297056,0.015030665,0.0012788074,0.00037588787,0.00003223825,0.000020363146,0.0007718394],"genre_scores_gemma":[0.9719425,0.0000056101153,0.00015034717,0.027506715,0.000112921036,0.000022005384,0.000062323066,0.000018602088,0.0001789904],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.99731433,0.0013257463,0.00044558456,0.00034392855,0.000052590916,0.0005178359],"domain_scores_gemma":[0.9984661,0.0005088005,0.00020963252,0.0007675445,0.000009460453,0.00003845984],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0008048978,0.00025188795,0.00037704397,0.0000537851,0.00028987994,0.000007936171,0.0013976333,0.00026275072,0.0011052559],"category_scores_gemma":[0.000078407684,0.00015713829,0.00016420137,0.00030474804,0.0022100874,0.00006550604,0.000668042,0.000746607,0.0002866141],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00005653081,0.0000692992,0.009185176,0.0000053000044,0.000022056302,0.0000011900297,0.0008773931,0.00031267654,0.9184042,0.000031298296,0.0707882,0.00024665508],"study_design_scores_gemma":[0.0033872994,0.0004010349,0.20662828,0.00008148994,0.0000993034,0.00032287108,0.00031168578,0.00010314738,0.10657078,0.00056121935,0.6805891,0.00094382226],"about_ca_topic_score_codex":0.0014359821,"about_ca_topic_score_gemma":0.0062331394,"teacher_disagreement_score":0.81183344,"about_ca_system_score_codex":0.000088468354,"about_ca_system_score_gemma":0.000015215979,"threshold_uncertainty_score":0.9998079},"labels":[],"label_agreement":null},{"id":"W2002751711","doi":"10.1111/j.1574-6968.1997.tb12709.x","title":"Ampicillin-induced bacteriolysis of Escherichia coli is not affected by reduction in levels of anionic phospholipids","year":2006,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Lipid Membrane Structure and Behavior","field":"Biochemistry, Genetics and Molecular Biology","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Victoria","funders":"Natural Sciences and Engineering Research Council of Canada; University of Victoria","keywords":"Phosphatidylglycerol; Escherichia coli; Cardiolipin; Lysis; Membrane; Chemistry; Bacteria; Biochemistry; Phospholipid; Membrane protein; Microbiology; Biology; Gene","score_opus":0.0074067798725786374,"score_gpt":0.21844675617745118,"score_spread":0.21103997630487253,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2002751711","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9986549,0.00007983487,0.00004320514,0.00031014762,0.00039854445,0.00020888641,0.00027693406,0.000008474367,0.000019062256],"genre_scores_gemma":[0.9983891,0.000017896662,0.0002612012,0.00052515004,0.00015757908,0.000011582894,0.0005059956,0.000021269201,0.00011019039],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9987545,0.00010298497,0.0004266793,0.00039116357,0.000044419663,0.00028027562],"domain_scores_gemma":[0.99935114,0.000008114056,0.0002425743,0.0003142797,0.00005747152,0.000026436675],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000110095454,0.00020881045,0.00035941793,0.000082249906,0.000027908261,0.0000046579435,0.00018283061,0.0003202114,0.00005690976],"category_scores_gemma":[0.00001102807,0.00019895371,0.00013921395,0.00019291622,0.00017520154,0.000005204013,0.000051928415,0.0001371199,0.0000028799304],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009727869,0.00011743986,0.0015519366,0.000020770283,0.00004587462,7.7951006e-7,0.000046211884,0.0000078791645,0.99519044,0.0000016497623,0.0026468453,0.0002729149],"study_design_scores_gemma":[0.00097425026,0.00015622437,0.02843212,0.000015205861,0.0000378987,0.000013612858,0.00001699453,6.432957e-7,0.9682324,7.9261673e-7,0.001927669,0.00019220701],"about_ca_topic_score_codex":0.00040183504,"about_ca_topic_score_gemma":0.00003923256,"teacher_disagreement_score":0.026958037,"about_ca_system_score_codex":0.000025294916,"about_ca_system_score_gemma":0.000043030122,"threshold_uncertainty_score":0.8113097},"labels":[],"label_agreement":null},{"id":"W2002753896","doi":"10.1016/s0378-1097(03)00173-3","title":"Enhanced production of poly(3-hydroxybutyrate-<i>co</i>-3-hydroxyhexanoate) via manipulating the fatty acid β-oxidation pathway in<i>E. coli</i>","year":2003,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"biodegradable polymer synthesis and properties","field":"Materials Science","cited_by":49,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Tsinghua University; National Natural Science Foundation of China; RIKEN; Public Health Agency of Canada","keywords":"Chemistry; Poly-3-hydroxybutyrate; Biochemistry; Fatty acid; Production (economics); Beta oxidation; Food science","score_opus":0.016056961261529317,"score_gpt":0.21051219189138493,"score_spread":0.19445523062985562,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2002753896","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99234265,0.0022302275,0.002216301,0.0014578871,0.0011106451,0.00033662937,0.000018012795,0.000049500668,0.00023815376],"genre_scores_gemma":[0.9976944,0.00002495399,0.00066483184,0.0013335044,0.00008045745,0.000051177867,0.000026684998,0.00002422193,0.00009982117],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99775755,0.00058346736,0.00057892833,0.0005031074,0.000094899326,0.00048204986],"domain_scores_gemma":[0.9990622,0.00007801608,0.00034582947,0.0004367757,0.000042880696,0.000034335008],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00086585875,0.000258708,0.00035370875,0.00010052825,0.0002377246,0.000037135636,0.00030272856,0.00015826363,0.00016363178],"category_scores_gemma":[0.00007896274,0.00018019197,0.0000834868,0.00021858093,0.00035805415,0.00020448361,0.000041059782,0.00018853629,0.000091021946],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000048317746,0.000048168367,0.00054868794,0.000025361358,0.000012974586,0.0000013384441,0.0005388424,0.000033095148,0.99694747,0.00005948267,0.00020252028,0.0015337295],"study_design_scores_gemma":[0.00023326774,0.00004562439,0.00044358318,0.000048096932,0.000009984303,0.000031531425,0.00010344102,0.000013179435,0.99756056,0.000026458625,0.001258324,0.00022592198],"about_ca_topic_score_codex":0.0002653509,"about_ca_topic_score_gemma":0.00008594095,"teacher_disagreement_score":0.0053517036,"about_ca_system_score_codex":0.00006646943,"about_ca_system_score_gemma":0.000043333108,"threshold_uncertainty_score":0.73480153},"labels":[],"label_agreement":null},{"id":"W2003286804","doi":"10.1111/j.1574-6968.2007.00768.x","title":"Rac1, RhoA, and Cdc42 participate in HeLa cell invasion by group B streptococcus","year":2007,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Neonatal and Maternal Infections","field":"Medicine","cited_by":30,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Provincial Laboratory of Public Health; University of Alberta","funders":"Natural Sciences and Engineering Research Council of Canada; Children's Health Foundation; University of Alberta","keywords":"RHOA; CDC42; HeLa; GTPase; Biology; Clostridium difficile toxin B; RAC1; Cell biology; Internalization; Cell; Microbiology; Clostridium difficile toxin A; Signal transduction; Biochemistry","score_opus":0.008147650159918052,"score_gpt":0.23711930585920124,"score_spread":0.22897165569928318,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2003286804","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.996763,0.00037274777,0.00026930217,0.001782439,0.00024771426,0.00028088925,0.000023251216,0.00004023079,0.00022045874],"genre_scores_gemma":[0.9919518,0.00004831641,0.00013578794,0.0072852625,0.000063482614,0.000016694996,0.000109434826,0.000013683757,0.00037549387],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9990865,0.00003604402,0.00023768372,0.0002586838,0.000026189755,0.00035487764],"domain_scores_gemma":[0.99964696,0.000063179934,0.000056301855,0.00012765713,0.0000111770105,0.000094701005],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00021702531,0.0001353112,0.00020719097,0.000114255614,0.00004823822,0.0000075134026,0.000044914435,0.0001145719,0.0000728187],"category_scores_gemma":[0.000009951906,0.000113212765,0.000039698487,0.000094368894,0.00014196621,0.00004740874,0.000053512835,0.00023166319,0.00008380612],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008505101,0.00009503256,0.071587175,0.000026758824,0.000013289178,0.00012744773,0.00010909933,8.1457614e-7,0.91843873,0.000008360243,0.008546974,0.000961285],"study_design_scores_gemma":[0.0037690264,0.00045827567,0.1136721,0.000121055025,0.000056552228,0.00047272578,0.00010495456,0.0000049960313,0.7756039,0.00003547107,0.10536139,0.00033955506],"about_ca_topic_score_codex":0.00034075323,"about_ca_topic_score_gemma":0.00019431848,"teacher_disagreement_score":0.14283481,"about_ca_system_score_codex":0.000045328055,"about_ca_system_score_gemma":0.000006938683,"threshold_uncertainty_score":0.46166825},"labels":[],"label_agreement":null},{"id":"W2004127343","doi":"10.1111/j.1574-6968.1997.tb10213.x","title":"Cloning and characterization of the groE locus from Actinobacillus pleuropneumoniae","year":2006,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Microbial infections and disease research","field":"Immunology and Microbiology","cited_by":17,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université du Québec à Trois-Rivières; Université Laval","funders":"","keywords":"GroES; GroEL; Biology; Genetics; Actinobacillus pleuropneumoniae; Nucleic acid sequence; Complementation; Gene; Molecular biology; Escherichia coli; Sequence analysis; Mutant","score_opus":0.005860632964134283,"score_gpt":0.1934304434919213,"score_spread":0.187569810527787,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2004127343","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99683195,0.0003978327,0.00012348848,0.0012543332,0.0006491818,0.0002142508,0.00039777526,0.000037953872,0.000093206814],"genre_scores_gemma":[0.9983738,0.00002925471,0.000013581161,0.00055836973,0.00006723826,0.000008897153,0.0005772533,0.000015579686,0.00035603327],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99877495,0.00028447376,0.0002853972,0.00031254647,0.000015106201,0.000327545],"domain_scores_gemma":[0.9993976,0.00009472212,0.00016627354,0.00028219062,0.000044150183,0.000015102604],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000105642335,0.00016667608,0.00023325499,0.000089905,0.00025622218,0.00001734553,0.000189485,0.00018610372,0.00023424446],"category_scores_gemma":[0.000020352873,0.00012430684,0.00009672222,0.00015239674,0.0005753195,0.00006138911,0.0001688117,0.00027284678,0.00009334122],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00004226776,0.000053308555,0.01595389,0.0000072574717,0.00006695561,0.0000023054088,0.000056528927,0.0000038535663,0.981872,0.00009004619,0.0015021175,0.00034941942],"study_design_scores_gemma":[0.000735694,0.000030334442,0.09214657,0.000027927817,0.000040233004,0.000095731855,0.000017078019,0.0000011438098,0.88632745,0.000024193256,0.020391623,0.00016205198],"about_ca_topic_score_codex":0.0011483381,"about_ca_topic_score_gemma":0.00006916258,"teacher_disagreement_score":0.095544636,"about_ca_system_score_codex":0.00003165613,"about_ca_system_score_gemma":0.000030018406,"threshold_uncertainty_score":0.5069086},"labels":[],"label_agreement":null},{"id":"W2004496496","doi":"10.1111/j.1574-6968.2009.01539.x","title":"A genome map of<i>Salmonella enterica</i>serovar Agona: numerous insertions and deletions reflecting the evolutionary history of a human pathogen","year":2009,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Salmonella and Campylobacter epidemiology","field":"Agricultural and Biological Sciences","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary; Public Health Agency of Canada","funders":"Public Health Agency of Canada","keywords":"Biology; Salmonella enterica; Genome; Genomic island; Genetics; Salmonella; Serotype; Pathogen; Pathogenicity island; Pulsed-field gel electrophoresis; Gene; Microbiology; Computational biology; Bacteria; Genotype","score_opus":0.02743596752712735,"score_gpt":0.23300120663980578,"score_spread":0.20556523911267843,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2004496496","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.988977,0.0023249825,0.000015573241,0.008109131,0.00017164409,0.00017538709,0.00008146581,0.00003310002,0.0001116781],"genre_scores_gemma":[0.99579304,0.000057668243,0.00019959817,0.003485974,0.0001240815,0.000011378151,0.00021153342,0.0000015860262,0.00011514051],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9985921,0.00032022802,0.00042712814,0.00031734986,0.000038660746,0.00030455246],"domain_scores_gemma":[0.9993018,0.00022149843,0.0002712344,0.00011613822,0.00004291087,0.00004642914],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002619405,0.00016451746,0.0003250572,0.000029491179,0.00017720352,0.0000034089373,0.00027568155,0.00013630846,0.00006869969],"category_scores_gemma":[0.000025518331,0.00007199664,0.00013764387,0.00012381493,0.0005123086,0.00003846516,0.00007202661,0.00017769802,0.00001019539],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000024323925,0.00006493279,0.009750564,0.0000038382523,0.000029566103,0.0000034864747,0.00031668006,0.000003781211,0.9863285,0.00007687769,0.0027939607,0.0006035309],"study_design_scores_gemma":[0.00036254057,0.0009762135,0.9066102,0.00003682247,0.00008787582,0.00037158452,0.0004062491,0.0000066825555,0.003226056,0.00065272575,0.08685072,0.00041233344],"about_ca_topic_score_codex":0.00022982029,"about_ca_topic_score_gemma":0.00005195789,"teacher_disagreement_score":0.9831024,"about_ca_system_score_codex":0.000084496154,"about_ca_system_score_gemma":0.0000122067495,"threshold_uncertainty_score":0.29359376},"labels":[],"label_agreement":null},{"id":"W2004986356","doi":"10.1111/j.1574-6968.2009.01781.x","title":"Strain-specific probiotic (<i>Lactobacillus helveticus</i>) inhibition of<i>Campylobacter jejuni</i>âinvasion of human intestinal epithelial cells","year":2009,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Salmonella and Campylobacter epidemiology","field":"Agricultural and Biological Sciences","cited_by":113,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hospital for Sick Children","funders":"Canadian Institutes of Health Research; Lallemand; Canada Research Chairs; Canadian Association of Gastroenterology","keywords":"Probiotic; Microbiology; Campylobacter jejuni; Lactobacillus rhamnosus; Lactobacillus helveticus; Biology; Pathogen; Lactobacillus; Strain (injury); Bacteria; Genetics","score_opus":0.019814744226094257,"score_gpt":0.21112154746972095,"score_spread":0.1913068032436267,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2004986356","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9965124,0.0001042293,0.000061011022,0.0020973068,0.00032438504,0.000359648,0.0003281424,0.00006369239,0.00014916711],"genre_scores_gemma":[0.99650073,0.00004243748,0.00030735915,0.0022638817,0.0002856659,0.000004690337,0.00056588784,0.0000030307215,0.000026322361],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9975382,0.00037684478,0.00083794334,0.0005746317,0.00008763266,0.0005847567],"domain_scores_gemma":[0.998812,0.00027790773,0.0005230299,0.0001739819,0.000111430396,0.00010162685],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004299717,0.00034642493,0.00065539207,0.00006150703,0.000129377,0.000014968707,0.0003635599,0.0003134361,0.00027302513],"category_scores_gemma":[0.000030125555,0.00016757325,0.0002899972,0.00031092318,0.000515063,0.00008743597,0.00007700449,0.0003044463,0.000051445448],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000093024326,0.00023213074,0.0021303291,0.000011919636,0.000020236384,0.000011694139,0.00009864418,0.0000068806894,0.99018973,0.00021189988,0.0018472187,0.00514632],"study_design_scores_gemma":[0.00053131167,0.0015962785,0.07738529,0.00010059538,0.000030435685,0.00010368895,0.00008977466,9.628367e-7,0.91556907,0.0005700649,0.003637454,0.0003850758],"about_ca_topic_score_codex":0.00005897439,"about_ca_topic_score_gemma":0.00003874753,"teacher_disagreement_score":0.07525496,"about_ca_system_score_codex":0.00004798915,"about_ca_system_score_gemma":0.000010048548,"threshold_uncertainty_score":0.6833439},"labels":[],"label_agreement":null},{"id":"W2005056679","doi":"10.1016/j.femsle.2005.07.030","title":"Modulation of plant ethylene levels by the bacterial enzyme ACC deaminase","year":2005,"lang":"en","type":"review","venue":"FEMS Microbiology Letters","topic":"Legume Nitrogen Fixing Symbiosis","field":"Agricultural and Biological Sciences","cited_by":854,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Waterloo","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Ethylene; Enzyme; Enzyme assay; Chemistry; Biochemistry; Biology","score_opus":0.034215056490239246,"score_gpt":0.2473492984735977,"score_spread":0.21313424198335845,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2005056679","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.18163419,0.8090315,0.0000012594596,0.0015172776,0.00066693535,0.00078457623,0.006293841,0.000057885845,0.0000125324095],"genre_scores_gemma":[0.023412522,0.9500865,0.00016573184,0.0029605718,0.0029949022,0.00018018369,0.019858198,0.000019862895,0.00032157678],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9977169,0.0005456536,0.00067442865,0.00053016405,0.000078395584,0.00045446417],"domain_scores_gemma":[0.99858576,0.0005246103,0.00063090096,0.00017528736,0.00003064328,0.000052785486],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00035224913,0.0004503261,0.0010455718,0.000028200953,0.0001506988,0.000033525932,0.00080962956,0.00058858155,0.00041593652],"category_scores_gemma":[0.00003715511,0.00014656357,0.00047532417,0.0002354138,0.00024334397,0.0000619305,0.00016021452,0.00039112312,0.00011909809],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000005937398,0.000026855167,0.000003575452,0.0000805099,0.00008840009,0.0000016914098,0.00001784339,6.981948e-8,0.70922107,0.000002191297,0.01615294,0.27439892],"study_design_scores_gemma":[0.00010030681,0.000061770144,0.00008336129,0.00042281736,0.00017899695,0.000107770524,0.0000049799673,2.3825791e-7,0.007356628,0.000001384895,0.9913413,0.0003404667],"about_ca_topic_score_codex":0.00013956019,"about_ca_topic_score_gemma":0.00007601978,"teacher_disagreement_score":0.9751883,"about_ca_system_score_codex":0.00009360701,"about_ca_system_score_gemma":0.000021124466,"threshold_uncertainty_score":0.59766895},"labels":[],"label_agreement":null},{"id":"W2006420907","doi":"10.1016/j.femsle.2005.09.030","title":"From bioremediation to biowarfare: On the impact and mechanism of type IV secretion systems","year":2005,"lang":"en","type":"review","venue":"FEMS Microbiology Letters","topic":"Antibiotic Resistance in Bacteria","field":"Biochemistry, Genetics and Molecular Biology","cited_by":34,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research; Ontario Innovation Trust","keywords":"Secretion; Pilus; Virulence; Chromosomal translocation; Effector; Mechanism (biology); Biology; Cell biology; Horizontal gene transfer; DNA; Cell envelope; Type VI secretion system; Exogenous DNA; Microbiology; Gene; Biochemistry; Escherichia coli; Genome","score_opus":0.020330766078088928,"score_gpt":0.28419513558953524,"score_spread":0.2638643695114463,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2006420907","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.24812418,0.7485474,0.00025778371,0.00030863914,0.0009718082,0.0009743319,0.00078713027,0.000012318696,0.000016422344],"genre_scores_gemma":[0.02520518,0.96978986,0.0001571779,0.00049974944,0.00100719,0.000021795273,0.0032032377,0.00006182818,0.000053969437],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9984923,0.00028558297,0.00042441682,0.00050469796,0.000045525336,0.0002474715],"domain_scores_gemma":[0.99891925,0.00007389412,0.00039251897,0.0005155021,0.00004657125,0.00005227475],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00022076209,0.00036090537,0.0006942443,0.00009408315,0.00004744489,0.00002457475,0.00030709256,0.00053392205,0.000020948815],"category_scores_gemma":[0.00007678713,0.00022831252,0.00017983295,0.000117133946,0.00013020863,0.000002238672,0.0001045337,0.00016952897,0.000050122802],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000060822676,0.000022203194,0.000026107606,0.0002990247,0.0003822541,0.0000021033031,0.000037377522,0.000007970563,0.9711827,0.000050380084,0.012842455,0.015086594],"study_design_scores_gemma":[0.00019272392,0.0003915509,0.00006298408,0.001815445,0.0002251337,0.00004103802,0.000027895063,0.0000057901957,0.002799734,0.0000058243922,0.99394214,0.0004897284],"about_ca_topic_score_codex":0.00006679557,"about_ca_topic_score_gemma":0.0000055354703,"teacher_disagreement_score":0.9810997,"about_ca_system_score_codex":0.00006222889,"about_ca_system_score_gemma":0.00006975016,"threshold_uncertainty_score":0.93103147},"labels":[],"label_agreement":null},{"id":"W2007709133","doi":"10.1111/1574-6968.12185","title":"Role of uropathogenic<i>Escherichia coli</i>OmpT in the resistance against human cathelicidin LL-37","year":2013,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Antimicrobial Peptides and Activities","field":"Immunology and Microbiology","cited_by":36,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"Canadian Institutes of Health Research","keywords":"Escherichia coli; Microbiology; Cathelicidin; Bacterial outer membrane; Biology; Mutant; Antimicrobial peptides; Chemistry; Antimicrobial; Biochemistry; Gene","score_opus":0.0068350039905402836,"score_gpt":0.19629586409810884,"score_spread":0.18946086010756855,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2007709133","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99366415,0.0017782666,0.000013387633,0.002199329,0.00024907093,0.00052802,0.00010516608,0.000044234228,0.0014183862],"genre_scores_gemma":[0.99153316,0.00007498373,0.0001372329,0.007102872,0.000054500564,0.0000636717,0.00023803719,0.000030230747,0.0007653216],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9978162,0.0005415084,0.00054235396,0.0004297434,0.000022800708,0.0006473764],"domain_scores_gemma":[0.99896944,0.00018178282,0.0002840746,0.0004978079,0.000049637325,0.000017233184],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00034427844,0.00031785466,0.0004969602,0.00011608171,0.00023946719,0.000023680379,0.0007041889,0.00029951855,0.00023907551],"category_scores_gemma":[0.00002719443,0.00024143582,0.00018781028,0.00021430837,0.00091002707,0.00011684043,0.00011826874,0.00056347897,0.00044964708],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00003893028,0.00012246709,0.0017212806,0.000013305815,0.00007460812,0.000005105925,0.0012802107,0.00000786543,0.96603096,0.00033594292,0.030126985,0.00024234227],"study_design_scores_gemma":[0.0014383178,0.000134855,0.024892477,0.0001026527,0.00003895699,0.00005048415,0.0020799462,7.8378076e-7,0.891474,0.00016513174,0.07904528,0.0005770919],"about_ca_topic_score_codex":0.0007071512,"about_ca_topic_score_gemma":0.00034341917,"teacher_disagreement_score":0.07455694,"about_ca_system_score_codex":0.00004392533,"about_ca_system_score_gemma":0.00003290416,"threshold_uncertainty_score":0.98454666},"labels":[],"label_agreement":null},{"id":"W2007773643","doi":"10.1016/s0378-1097(03)00682-7","title":"Nitrogen status modulates the expression of RNA-binding proteins in cyanobacteria","year":2003,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Photosynthetic Processes and Mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":15,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Memorial University of Newfoundland","funders":"National Institute of General Medical Sciences","keywords":"Cyanobacteria; RNA-binding protein; RNA; Protein expression; Gene expression; Biology; Chemistry; Bacteria; Cell biology; Biochemistry; Genetics; Gene","score_opus":0.005891949067776577,"score_gpt":0.20477232150838098,"score_spread":0.1988803724406044,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2007773643","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9982999,0.00016668737,0.00079476775,0.00014955997,0.00015506666,0.00028048822,0.0000415084,0.0000061904543,0.00010583805],"genre_scores_gemma":[0.9985819,0.000058114783,0.00069400674,0.00047384974,0.00002712205,0.00004013019,0.00008206832,0.000016925891,0.00002590066],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9990077,0.00011993419,0.00021443362,0.00027613336,0.000029255843,0.00035255085],"domain_scores_gemma":[0.99953103,0.000013207205,0.0001193208,0.00027969148,0.000022239547,0.00003448552],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001912145,0.0001463091,0.00015992008,0.000045104312,0.000055037282,0.000007652481,0.00019657466,0.00013948149,0.000026555876],"category_scores_gemma":[0.00006210091,0.00010514467,0.000064370484,0.00007411878,0.00011307986,0.00000334018,0.0000718124,0.00010084831,0.0000053757235],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00003994915,0.000034051533,0.0011299942,0.00001099928,0.000016565375,0.0000020175034,0.00008925349,0.000019423984,0.9984698,0.000039213628,0.000086103726,0.00006257689],"study_design_scores_gemma":[0.00038618626,0.00007430143,0.00007121594,0.000026391162,0.0000061891087,0.00002823254,0.00008082174,0.0000011317587,0.9930943,0.00010587246,0.0060000364,0.00012531568],"about_ca_topic_score_codex":0.000023907865,"about_ca_topic_score_gemma":0.000014989218,"teacher_disagreement_score":0.0059139323,"about_ca_system_score_codex":0.0000148325935,"about_ca_system_score_gemma":0.00004419996,"threshold_uncertainty_score":0.4287675},"labels":[],"label_agreement":null},{"id":"W2007823827","doi":"10.1016/j.femsle.2004.07.052","title":"Molecular characterization of extraintestinal pathogenic (ExPEC) pathogenicity islands in F165-positive strain from a diseased animal","year":2004,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Escherichia coli research studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Cegep de Saint Hyacinthe","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Operon; Biology; Gene; Escherichia coli; Genetics; Pathogenicity island; L-arabinose operon; gal operon; Chromosome; Gene cluster; Bacterial adhesin","score_opus":0.006153686150641192,"score_gpt":0.22553094779244465,"score_spread":0.21937726164180346,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2007823827","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99428886,0.00023038806,0.002844315,0.00066312996,0.00005602108,0.0003234941,0.0015589582,0.000012310438,0.000022502076],"genre_scores_gemma":[0.9954944,0.00003562006,0.00073520816,0.001063656,0.00009232055,0.000045879737,0.0025032721,0.000024418458,0.0000052018013],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9984859,0.00020802094,0.00031610046,0.0005120539,0.00006998603,0.00040790415],"domain_scores_gemma":[0.99943703,0.00002591247,0.00013666289,0.00026141643,0.000071245675,0.00006773059],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015154797,0.00023492285,0.0002696576,0.000082298706,0.000048895858,0.000010661944,0.00023958349,0.00016130453,0.000013740106],"category_scores_gemma":[0.00012299097,0.00023576528,0.00013597327,0.00013946832,0.00030194776,0.000006637114,0.0001549771,0.00018430976,0.000005159566],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00033919973,0.00014270688,0.012103628,0.000009929374,0.000098880075,0.00008630586,0.00021878106,0.00003133752,0.98678595,0.00001707394,0.000014981547,0.00015122221],"study_design_scores_gemma":[0.001711786,0.00039039907,0.27438048,0.00005056024,0.000023096238,0.000022298847,0.000058510923,0.000015228716,0.7229595,0.000024684703,0.00008645281,0.00027700383],"about_ca_topic_score_codex":0.00006226521,"about_ca_topic_score_gemma":0.000063135776,"teacher_disagreement_score":0.26382643,"about_ca_system_score_codex":0.000061962586,"about_ca_system_score_gemma":0.00012404201,"threshold_uncertainty_score":0.9614229},"labels":[],"label_agreement":null},{"id":"W2009237609","doi":"10.1111/j.1574-6968.2002.tb11387.x","title":"High expression of a sucrose non-fermenting (SNF1)-related protein kinase from<i>Colletotrichum gloeosporoides</i>f. sp.<i>malvae</i>is associated with penetration of<i>Malva pusilla</i>","year":2002,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Plant Pathogens and Fungal Diseases","field":"Biochemistry, Genetics and Molecular Biology","cited_by":20,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Appressorium; Biology; Sucrose; Colletotrichum; Microbiology; Fungus; Glycerol; Botany; Gene expression; Glycerol kinase; Fermentation; Penetration (warfare); Gene; Biochemistry","score_opus":0.004730489702552658,"score_gpt":0.17140487546764116,"score_spread":0.1666743857650885,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2009237609","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99590474,0.00068595563,0.00012436138,0.00019344201,0.00012239277,0.0005459918,0.002311847,0.00002216897,0.00008912466],"genre_scores_gemma":[0.9956357,0.000059405294,0.00069561676,0.00081710017,0.000068992726,0.000034103672,0.0024066183,0.00003832153,0.0002441783],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9980948,0.00016211832,0.00058294146,0.00060713605,0.000116506155,0.00043652797],"domain_scores_gemma":[0.9987333,0.00003718301,0.00060429267,0.0004112808,0.00012425438,0.0000897148],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00016104573,0.00034308588,0.00048283322,0.00009918116,0.00011578765,0.00001612013,0.00026668303,0.000363288,0.00012855942],"category_scores_gemma":[0.000072588184,0.00029935627,0.00018516245,0.00024648677,0.00023852255,0.000013587592,0.00011108858,0.00016969565,0.00001167223],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002210798,0.00025604843,0.017505456,0.000024900817,0.0001930495,0.000043953154,0.000089321686,0.00007618614,0.9757613,0.0000017916316,0.0057421066,0.00008478922],"study_design_scores_gemma":[0.0018842194,0.00037955516,0.013736139,0.000209581,0.000104923965,0.000023523444,0.000025274958,0.00002939628,0.9826708,0.000004494721,0.00055735186,0.00037473688],"about_ca_topic_score_codex":0.000096432814,"about_ca_topic_score_gemma":0.000021911148,"teacher_disagreement_score":0.006909486,"about_ca_system_score_codex":0.000027402577,"about_ca_system_score_gemma":0.000032063508,"threshold_uncertainty_score":0.9999459},"labels":[],"label_agreement":null},{"id":"W2009314991","doi":"10.1016/j.femsle.2005.07.028","title":"Transcriptional regulation of the S-layer protein type I secretion system in<i>Caulobacter crescentus</i>","year":2005,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Bacterial Genetics and Biotechnology","field":"Biochemistry, Genetics and Molecular Biology","cited_by":10,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"Caulobacter crescentus; Operon; Transcription (linguistics); Secretion; Biology; Gene; Transcriptional regulation; Transcription factor; Cell biology; Escherichia coli; Genetics; Biochemistry; Bacterial protein","score_opus":0.00580209244091811,"score_gpt":0.18724537646702646,"score_spread":0.18144328402610835,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2009314991","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99659306,0.00014975578,0.00012391845,0.0023536815,0.00036672945,0.00031011907,0.000032307402,0.0000106883945,0.000059769867],"genre_scores_gemma":[0.9983986,0.000011583861,0.00039752864,0.000663895,0.00021777976,0.0000120726445,0.00016663322,0.000012673903,0.000119209144],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99913496,0.00009804795,0.00026416781,0.00026157984,0.000036120928,0.0002051394],"domain_scores_gemma":[0.9995444,0.0000025873308,0.00011362502,0.0002762453,0.000045571764,0.000017560362],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012434016,0.00012743213,0.00013393813,0.00004875924,0.000038366445,0.0000059033655,0.0002067121,0.00032718308,0.000019512083],"category_scores_gemma":[0.000009222796,0.00009873918,0.000076190074,0.00010832387,0.00016431765,0.0000031227116,0.000060239832,0.00012016132,0.000010349975],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010545562,0.000029077653,0.0013887741,0.000014691415,0.000020038786,2.5417242e-7,0.000017689401,0.00006879248,0.9972348,0.00015571916,0.0006675546,0.0002971417],"study_design_scores_gemma":[0.00047603418,0.00008892786,0.020069424,0.00003624964,0.000009000818,0.000030185409,0.000010957748,0.000020088128,0.9218991,0.000004082508,0.057237536,0.0001184314],"about_ca_topic_score_codex":0.000013658588,"about_ca_topic_score_gemma":0.00007180071,"teacher_disagreement_score":0.075335726,"about_ca_system_score_codex":0.0000364754,"about_ca_system_score_gemma":0.000030737225,"threshold_uncertainty_score":0.4026467},"labels":[],"label_agreement":null},{"id":"W2010537819","doi":"10.1111/1574-6968.12463","title":"Enterohemorrhagic<i>Escherichia coli</i>OmpT regulates outer membrane vesicle biogenesis","year":2014,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Escherichia coli research studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":33,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Centennial College; Ontario Tech University","funders":"University of Ontario Institute of Technology","keywords":"Bacterial outer membrane; Biogenesis; Escherichia coli; Biology; Microbiology; Vesicle; Protease; Mutant; Cell biology; Gene; Biochemistry; Membrane; Enzyme","score_opus":0.007161357838035223,"score_gpt":0.21985132609000113,"score_spread":0.2126899682519659,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2010537819","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99353886,0.0005111967,0.0007150905,0.003993869,0.00043884123,0.00027932692,0.00005136599,0.000058492482,0.00041296866],"genre_scores_gemma":[0.9830172,0.00012800803,0.002713998,0.012428198,0.0005585174,0.000070296264,0.0003068902,0.000059823553,0.0007170896],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99780357,0.0003114042,0.00032149322,0.0007345926,0.000082417224,0.0007465368],"domain_scores_gemma":[0.9989753,0.000054192027,0.000121388664,0.00063574343,0.000085993066,0.0001274067],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00035926752,0.00035963734,0.00036635797,0.00008258513,0.00019810574,0.000038891594,0.00050492835,0.00024178142,0.000052221185],"category_scores_gemma":[0.00012113605,0.00032686148,0.00019124728,0.0001634353,0.0004655591,0.0000072136195,0.0003785411,0.00018863914,0.00013825753],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011075363,0.000059269085,0.0041497527,0.00002403278,0.00019227424,0.000007457071,0.00005184759,0.000024697374,0.9654787,0.000011560761,0.029410351,0.00047926063],"study_design_scores_gemma":[0.0008851066,0.00023492078,0.004127149,0.00001324165,0.0000296963,0.00003695798,0.000025288515,0.000043741205,0.8302655,0.0000064038213,0.16393323,0.00039874585],"about_ca_topic_score_codex":0.00004567098,"about_ca_topic_score_gemma":0.00004126717,"teacher_disagreement_score":0.13521323,"about_ca_system_score_codex":0.000029678862,"about_ca_system_score_gemma":0.00003112871,"threshold_uncertainty_score":0.99991834},"labels":[],"label_agreement":null},{"id":"W2011162409","doi":"10.1111/j.1574-6968.2001.tb10686.x","title":"Effects of 2,2â²,5,5â²-tetrachlorobiphenyl and biphenyl on cell membranes of<i>Ralstonia eutropha</i>H850","year":2001,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":63,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"Natural Sciences and Engineering Research Council of Canada; Korea Science and Engineering Foundation","keywords":"Membrane; Biphenyl; Fructose; Chemistry; Fluorescence anisotropy; Ralstonia; Cell membrane; Biophysics; Biochemistry; Fatty acid; Cytoplasm; Cell; Polarization (electrochemistry); Biology; Organic chemistry; Enzyme","score_opus":0.003278981506312186,"score_gpt":0.1737203281912086,"score_spread":0.17044134668489644,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2011162409","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9978618,0.00021663061,0.000018938286,0.00058169104,0.0003099469,0.00030063002,0.00003668978,0.000027170967,0.0006464723],"genre_scores_gemma":[0.99649036,0.00026093374,0.00039424404,0.0025780033,0.000035443823,0.0000030661975,0.000024821202,0.000017149769,0.00019599531],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9986849,0.00011466512,0.00035658586,0.00040568563,0.00008334793,0.00035481757],"domain_scores_gemma":[0.99929076,0.00015278476,0.00024413427,0.00022129556,0.000009100709,0.000081907034],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015961032,0.00024149302,0.0003562583,0.000082166516,0.00006103419,0.0000075929256,0.0002489321,0.00016419168,0.00049197144],"category_scores_gemma":[0.000022301763,0.00020154688,0.00009358021,0.00021537811,0.0006102426,0.000071493356,0.00011173816,0.00015204951,0.00020159493],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000929828,0.00013677914,0.018046448,0.00005748167,0.000018709228,0.000015014443,0.00022538824,0.00004826779,0.9774904,0.0000031538038,0.0032887084,0.0005766286],"study_design_scores_gemma":[0.001011287,0.00019356875,0.032637574,0.000028420787,0.000028780903,0.000029283654,0.000017218767,0.0000043918785,0.9556761,0.000004397615,0.010141692,0.00022731595],"about_ca_topic_score_codex":0.00014185015,"about_ca_topic_score_gemma":0.000024129944,"teacher_disagreement_score":0.021814369,"about_ca_system_score_codex":0.000047049358,"about_ca_system_score_gemma":0.0000066562084,"threshold_uncertainty_score":0.8218843},"labels":[],"label_agreement":null},{"id":"W2011172109","doi":"10.1111/j.1574-6968.2006.00413.x","title":"Identification of a<i>Francisella tularensis</i>LVS outer membrane protein that confers adherence to A549 human lung cells","year":2006,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Bacillus and Francisella bacterial research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":56,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"University of Victoria","keywords":"Francisella tularensis; Francisella; Microbiology; A549 cell; Bacterial outer membrane; Biology; Bacteria; Recombinant DNA; Escherichia coli; Biotinylation; Virology; Molecular biology; Cell; Virulence; Biochemistry; Gene","score_opus":0.010456218835924812,"score_gpt":0.24203600596609684,"score_spread":0.23157978713017202,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2011172109","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99537385,0.00015454991,0.0025750634,0.00048283077,0.0003512417,0.00072854053,0.00017483148,0.000016719845,0.00014234959],"genre_scores_gemma":[0.99729276,0.000011246706,0.0002636194,0.00069849694,0.00022759162,0.00006321704,0.00047997007,0.000034196764,0.00092887814],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9982107,0.00014007834,0.00046010004,0.0006030677,0.0000971926,0.0004888467],"domain_scores_gemma":[0.99903136,0.000012380841,0.00019454675,0.00053521595,0.00014340311,0.000083096995],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00032395974,0.00025119152,0.0003127065,0.00010775778,0.000111241265,0.00003701217,0.00040115623,0.00025823186,0.00008489896],"category_scores_gemma":[0.000018566245,0.00024408975,0.00014869368,0.00012347754,0.00029384028,0.0000065893246,0.00013362877,0.00014138606,0.00006985128],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000118127144,0.000054399145,0.0005647164,0.00005256941,0.000046792684,0.000006064437,0.000042578697,0.0000424079,0.9896145,0.000034430726,0.009232264,0.00019117874],"study_design_scores_gemma":[0.00059465045,0.00016114942,0.00086564827,0.000024103785,0.000015539152,0.000010215367,0.00001198462,0.000004202702,0.9854263,0.000007516959,0.012612042,0.00026666193],"about_ca_topic_score_codex":0.00022117152,"about_ca_topic_score_gemma":0.00009728369,"teacher_disagreement_score":0.004188186,"about_ca_system_score_codex":0.000027868824,"about_ca_system_score_gemma":0.000038519727,"threshold_uncertainty_score":0.99536914},"labels":[],"label_agreement":null},{"id":"W2011660173","doi":"10.1111/j.1574-6968.2009.01625.x","title":"The presence of a 1-aminocyclopropane-1-carboxylate (ACC) deaminase deletion mutation alters the physiology of the endophytic plant growth-promoting bacterium<i>Burkholderia phytofirmans</i>PsJN","year":2009,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Plant-Microbe Interactions and Immunity","field":"Agricultural and Biological Sciences","cited_by":217,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Waterloo","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Biology; rpoS; Mutant; Siderophore; Microbiology; Burkholderia; Bacteria; Biochemistry; Gene; Gene expression; Genetics; Promoter","score_opus":0.009042547854989827,"score_gpt":0.18898089078132263,"score_spread":0.17993834292633282,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2011660173","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9927015,0.00012236177,0.000006274977,0.006041073,0.0005278767,0.0003781414,0.00017520513,0.000020151952,0.000027461214],"genre_scores_gemma":[0.99857545,0.000082573635,0.000019884881,0.001014551,0.000112680296,0.000015597941,0.00015420186,0.0000017755884,0.000023265775],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9983555,0.000499411,0.00044199819,0.0002658731,0.00006577658,0.00037143598],"domain_scores_gemma":[0.99858075,0.0006191232,0.00049674104,0.0001947379,0.00008354731,0.0000250722],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003218929,0.00020132204,0.000244624,0.000017108283,0.00048640423,0.000028639539,0.000713649,0.00009895295,0.000020203792],"category_scores_gemma":[0.000093047856,0.000063104184,0.0001683653,0.00023249505,0.00045257033,0.00010216057,0.00010747192,0.00031523334,0.000007733213],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000089623376,0.0000529228,0.00031705335,0.0000074982963,0.000033352717,0.0000021395542,0.000314166,0.000017033373,0.99561167,0.000017531904,0.00056482066,0.002972192],"study_design_scores_gemma":[0.0002477917,0.00027968673,0.18581286,0.00009107249,0.000041032778,0.00025916076,0.00030537698,0.00010705388,0.80964035,0.000096450785,0.0029319257,0.0001872621],"about_ca_topic_score_codex":0.00046062603,"about_ca_topic_score_gemma":0.00017315448,"teacher_disagreement_score":0.18597133,"about_ca_system_score_codex":0.00003081303,"about_ca_system_score_gemma":0.000010695727,"threshold_uncertainty_score":0.37410775},"labels":[],"label_agreement":null},{"id":"W2011789799","doi":"10.1111/j.1574-6968.2007.00964.x","title":"Growth with high planktonic biomass in<i>Shewanella oneidensis</i>fuel cells","year":2007,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Microbial Fuel Cells and Bioremediation","field":"Environmental Science","cited_by":151,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Agriculture and Agri-Food Canada","funders":"","keywords":"Shewanella oneidensis; Microbial fuel cell; Anode; Electron acceptor; Oxidizing agent; Chemistry; Electron transfer; Bacteria; Biophysics; Electrode; Chemical engineering; Biology; Biochemistry; Photochemistry; Organic chemistry","score_opus":0.0034534334521482044,"score_gpt":0.16502898117846854,"score_spread":0.16157554772632032,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2011789799","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99734634,0.00003833514,0.00019053543,0.0012008266,0.000380271,0.00024805823,0.000024520283,0.000042234347,0.00052886334],"genre_scores_gemma":[0.9936921,0.00003116487,0.0012799875,0.004630022,0.00008690106,0.000003263052,0.00011079594,0.000022167525,0.00014361739],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9983745,0.00005399584,0.00031766092,0.00052518497,0.00008858401,0.00064003596],"domain_scores_gemma":[0.9994551,0.00009110987,0.0001307212,0.00023048103,0.000008402496,0.00008417672],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00045000523,0.00023993521,0.00022761138,0.00010703269,0.00006863728,0.000019512247,0.0002847384,0.00019826397,0.00048674532],"category_scores_gemma":[0.000006511562,0.00019261322,0.000049350936,0.00032858347,0.00038077674,0.00008956456,0.00011454828,0.00024577192,0.00091265165],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007341782,0.00004986736,0.03962143,0.000013128935,0.000011178137,0.000102225524,0.00016508545,0.00005024157,0.9522692,0.000007254935,0.0075721866,0.000064784974],"study_design_scores_gemma":[0.0009932708,0.00013202945,0.097875856,0.000021799635,0.000017497903,0.00009758442,0.000034546887,0.0000024665037,0.88890433,0.000038745962,0.011425986,0.00045588985],"about_ca_topic_score_codex":0.0026380578,"about_ca_topic_score_gemma":0.0058764466,"teacher_disagreement_score":0.06336487,"about_ca_system_score_codex":0.00022268509,"about_ca_system_score_gemma":0.000011240661,"threshold_uncertainty_score":0.99986523},"labels":[],"label_agreement":null},{"id":"W2011894409","doi":"10.1111/j.1574-6968.2005.00071.x","title":"A recombinant<i>Mycobacterium tuberculosis in vitro</i>transcription system","year":2005,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Tuberculosis Research and Epidemiology","field":"Medicine","cited_by":40,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Sherbrooke","funders":"National Science Council; Canada Research Chairs; Canadian Lung Association","keywords":"RNA polymerase; Recombinant DNA; Transcription (linguistics); Biology; Sigma factor; Polymerase; Mycobacterium tuberculosis; Molecular biology; RNA polymerase II; Gene; Gene expression; Escherichia coli; Promoter; Genetics; Tuberculosis; Medicine","score_opus":0.013756220895018352,"score_gpt":0.2573797910349496,"score_spread":0.24362357013993127,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2011894409","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9377392,0.00048543644,0.00008144347,0.059987288,0.00058040913,0.00048345036,0.00003218381,0.00013496632,0.00047563508],"genre_scores_gemma":[0.9815496,0.0001576786,0.0011641511,0.016141417,0.000361372,0.000086214335,0.00036114518,0.0000334809,0.0001449422],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9974681,0.0004082648,0.0005873403,0.00055924297,0.00006510467,0.0009119359],"domain_scores_gemma":[0.9991798,0.00011972966,0.000083394436,0.00039151177,0.000044566572,0.00018104602],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000652129,0.00026807413,0.0006912923,0.00038713697,0.00006994467,0.000011881387,0.00016182695,0.00032296882,0.00008944641],"category_scores_gemma":[0.00008235424,0.00023157906,0.00021522019,0.00025936012,0.00019097749,0.000112057714,0.000046534416,0.0005935827,0.00063800527],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000597779,0.00012332835,0.012582417,0.000102433674,0.000096614676,0.00008683402,0.00013620246,0.000011444228,0.96572953,0.00002915406,0.017985163,0.0025190872],"study_design_scores_gemma":[0.011413429,0.0008218809,0.12676598,0.00064684136,0.0002548168,0.006786539,0.0003399048,0.00079766335,0.47845885,0.000009750451,0.3724773,0.0012270346],"about_ca_topic_score_codex":0.0003124121,"about_ca_topic_score_gemma":0.00008682756,"teacher_disagreement_score":0.48727068,"about_ca_system_score_codex":0.0005348238,"about_ca_system_score_gemma":0.000043258122,"threshold_uncertainty_score":0.944352},"labels":[],"label_agreement":null},{"id":"W2012323538","doi":"10.1016/j.femsle.2005.05.029","title":"Heterologous extracellular production of enterocin P from<i>Enterococcus faecium</i>P13 in the methylotrophic bacterium<i>Methylobacterium extorquens</i>","year":2005,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Probiotics and Fermented Foods","field":"Agricultural and Biological Sciences","cited_by":32,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Biotechnology Research Institute","funders":"","keywords":"Enterococcus faecium; Methanol dehydrogenase; Bacteriocin; Plasmid; Heterologous expression; Heterologous; Biology; Recombinant DNA; Bacteria; Microbiology; Methylobacterium; Biochemistry; Gene; Genetics","score_opus":0.0114162521951035,"score_gpt":0.196320656665373,"score_spread":0.18490440447026948,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2012323538","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98371536,0.00057624874,0.000025709554,0.014337629,0.0006755347,0.00046688004,0.00013680321,0.00004175338,0.00002410163],"genre_scores_gemma":[0.9944425,0.00006935362,0.00026773135,0.004146416,0.00053413905,0.000033835626,0.0004606615,0.0000037274126,0.000041623996],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9976859,0.00049280084,0.0005880116,0.0005972541,0.00009430631,0.00054173346],"domain_scores_gemma":[0.9992756,0.0001352304,0.0002761669,0.000220179,0.0000416369,0.00005118584],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00048173591,0.00030953734,0.00040385747,0.000045676326,0.00011020721,0.000037921538,0.0006754182,0.00023470492,0.00014242421],"category_scores_gemma":[0.000026607531,0.00012798749,0.00018914609,0.00026212784,0.0002656855,0.00013154648,0.000116931915,0.0003995695,0.000050159186],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010237181,0.00021177647,0.005163701,0.00000512983,0.000040800933,0.000009675797,0.00032673054,0.000019254601,0.9889915,0.000008043153,0.0011454769,0.003975517],"study_design_scores_gemma":[0.0010906403,0.0008597504,0.18041103,0.00007381465,0.00008878749,0.00015139974,0.00036394678,0.000021273003,0.70213467,0.00008445428,0.11396857,0.0007516873],"about_ca_topic_score_codex":0.00024504907,"about_ca_topic_score_gemma":0.00043823384,"teacher_disagreement_score":0.2868569,"about_ca_system_score_codex":0.000061232706,"about_ca_system_score_gemma":0.0000049072505,"threshold_uncertainty_score":0.5219178},"labels":[],"label_agreement":null},{"id":"W2012358097","doi":"10.1093/femsle/fnv002","title":"Draft genome sequences of two Aeromonas salmonicida subsp. salmonicida isolates harboring plasmids conferring antibiotic resistance","year":2015,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Aquaculture disease management and microbiota","field":"Immunology and Microbiology","cited_by":25,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval; Institut universitaire de cardiologie et de pneumologie de Québec","funders":"Fisheries and Oceans Canada; Natural Sciences and Engineering Research Council of Canada","keywords":"Aeromonas salmonicida; Plasmid; Biology; Microbiology; Antibiotic resistance; Aeromonas; Bacteria; Genome; Effector; Gene; Antibiotics; Vibrionaceae; Genetics","score_opus":0.017919844326141278,"score_gpt":0.23729872867033266,"score_spread":0.2193788843441914,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2012358097","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98579043,0.009670783,0.00023471742,0.0010949561,0.0013102231,0.00048545055,0.00019145025,0.00020067605,0.0010213252],"genre_scores_gemma":[0.99582565,0.00007138396,0.0005925597,0.0010255023,0.000090563524,0.000013119026,0.00074689824,0.000057671215,0.0015766483],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99692255,0.0003445758,0.00078562566,0.0008750082,0.0000430856,0.0010291317],"domain_scores_gemma":[0.998537,0.00011929948,0.00047807628,0.0006262635,0.00014820806,0.00009113834],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00048371495,0.0005792973,0.0008446776,0.0002747391,0.00022978827,0.000041675503,0.000851433,0.0003738731,0.00019993754],"category_scores_gemma":[0.000052705578,0.0005333274,0.00026010533,0.00029323346,0.0010508492,0.00021249344,0.00033848087,0.0005258552,0.00068505394],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00024048172,0.000106897714,0.0054042777,0.00007372492,0.00048823163,0.000050907056,0.00096380373,0.00010819187,0.9853869,0.00045087514,0.006674635,0.000051072493],"study_design_scores_gemma":[0.0043864707,0.00021391753,0.0024848368,0.00027354513,0.00034628256,0.00017238798,0.0009261195,0.0000027338908,0.91989386,0.00005630683,0.0701448,0.001098724],"about_ca_topic_score_codex":0.00029021283,"about_ca_topic_score_gemma":0.00021990492,"teacher_disagreement_score":0.06549303,"about_ca_system_score_codex":0.00023137685,"about_ca_system_score_gemma":0.00012683628,"threshold_uncertainty_score":0.9997118},"labels":[],"label_agreement":null},{"id":"W2013222840","doi":"10.1111/j.1574-6968.2001.tb10605.x","title":"A novel actin-related protein gene of<i>Colletotrichum gloeosporioides</i>f. sp.<i>malvae</i>shows altered expression corresponding with spore production","year":2001,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Plant Pathogens and Fungal Diseases","field":"Biochemistry, Genetics and Molecular Biology","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"Advanced Research Projects Agency; Federation of European Microbiological Societies","keywords":"Biology; Gene; Spore; Gene expression; Hypha; Fungus; Fungal protein; Genetics; Microbiology; Botany; Cell biology; Saccharomyces cerevisiae","score_opus":0.007872123613738607,"score_gpt":0.1992745053563951,"score_spread":0.1914023817426565,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2013222840","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9964034,0.00037466682,0.0011780584,0.00035279847,0.00042451307,0.000681904,0.00047681772,0.000037722282,0.00007010984],"genre_scores_gemma":[0.9940249,0.00005317368,0.0026813769,0.00054323394,0.0003113166,0.000050030805,0.0014330328,0.000045750294,0.0008572167],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9982659,0.00009449616,0.0003872195,0.0007043503,0.00008382928,0.0004641942],"domain_scores_gemma":[0.99899936,0.000013658118,0.0003482479,0.00044977394,0.00008922574,0.0000997444],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00018624967,0.00032852017,0.00033458506,0.00013943779,0.00014041999,0.000014901335,0.00024911392,0.00025259715,0.000033653763],"category_scores_gemma":[0.00006755469,0.00027292533,0.00013543728,0.00027024705,0.00019596041,0.00001266622,0.00010029404,0.00018607057,0.000010043737],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0015170028,0.00017086764,0.009953839,0.000023120732,0.00011009995,0.000050335904,0.000038697093,0.00020891805,0.9839845,0.0000027489227,0.0037651444,0.00017475392],"study_design_scores_gemma":[0.0011623211,0.0003108091,0.006550001,0.00010446588,0.000057460333,0.0010036782,0.000043756052,0.0000060857337,0.9773773,0.0000013944727,0.012995968,0.00038675332],"about_ca_topic_score_codex":0.000019103116,"about_ca_topic_score_gemma":0.000013426728,"teacher_disagreement_score":0.009230823,"about_ca_system_score_codex":0.000029336104,"about_ca_system_score_gemma":0.00007322623,"threshold_uncertainty_score":0.9999723},"labels":[],"label_agreement":null},{"id":"W2013228057","doi":"10.1093/femsle/fnv048","title":"Uptake of chitosan-derived D-glucosamine oligosaccharides in Streptomyces coelicolor A3(2)","year":2015,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Carbohydrate Chemistry and Synthesis","field":"Chemistry","cited_by":16,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Sherbrooke","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Streptomyces coelicolor; Chitosan; Glucosamine; Chemistry; Streptomycetaceae; Streptomyces; D-Glucosamine; Microbiology; Actinomycetales; Oligosaccharide; Biochemistry; Biology; Bacteria; Genetics","score_opus":0.021741172952823518,"score_gpt":0.2259999856050906,"score_spread":0.20425881265226709,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2013228057","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9956392,0.0003429568,0.000005731421,0.0009947759,0.00017194952,0.00006707838,0.0001858884,0.00006022071,0.0025322102],"genre_scores_gemma":[0.9987162,0.000025799987,0.00025427586,0.00044985116,0.00015756485,0.000026317859,0.0002887428,0.000024158175,0.000057135145],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9985139,0.000035518595,0.00053742,0.0004277134,0.000064673884,0.00042077838],"domain_scores_gemma":[0.9991145,0.00012979069,0.00021660648,0.0004086892,0.000024887528,0.000105484454],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00012196536,0.00027297882,0.0004908299,0.00009025595,0.000031319494,0.0000137242405,0.00039141605,0.00027577905,0.00025234834],"category_scores_gemma":[0.00015933883,0.00026504934,0.00012536129,0.0001601079,0.00031969123,0.0000619526,0.00010634521,0.0002591272,0.000019352728],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001025149,0.00009332584,0.0057019526,0.00005673564,0.000068047964,0.000037365335,0.0004109334,0.000038647606,0.9915038,0.000004773849,0.0013558561,0.000626087],"study_design_scores_gemma":[0.0009017207,0.000016874077,0.000554772,0.0000695059,0.000022331506,0.00004743527,0.00036590462,0.000014690537,0.9955187,0.000013822234,0.0022202323,0.00025399763],"about_ca_topic_score_codex":0.00011890559,"about_ca_topic_score_gemma":0.000036807916,"teacher_disagreement_score":0.0051471805,"about_ca_system_score_codex":0.000050185907,"about_ca_system_score_gemma":0.00006701491,"threshold_uncertainty_score":0.99998015},"labels":[],"label_agreement":null},{"id":"W2014865051","doi":"10.1111/j.1574-6968.2012.02528.x","title":"Resistance to antimicrobial peptides in Gram-negative bacteria","year":2012,"lang":"en","type":"review","venue":"FEMS Microbiology Letters","topic":"Antimicrobial Peptides and Activities","field":"Immunology and Microbiology","cited_by":153,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"Canadian Institutes of Health Research; Natural Sciences and Engineering Research Council of Canada; Canada Research Chairs","keywords":"Antimicrobial peptides; Microbiology; Bacteria; Biology; Antimicrobial; Gram-negative bacteria; Innate immune system; Pathogenic bacteria; Antibiotic resistance; Immune system; Immunology; Escherichia coli; Antibiotics; Biochemistry; Genetics","score_opus":0.02744243014736994,"score_gpt":0.26496195934773076,"score_spread":0.23751952920036082,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2014865051","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.008864999,0.98114866,0.000035977668,0.0006691161,0.005107474,0.0019516518,0.0016966715,0.00018785418,0.00033760417],"genre_scores_gemma":[0.002480935,0.98176295,0.001473291,0.003723254,0.0007054531,0.0002714209,0.003137943,0.0002824166,0.0061623612],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.99414945,0.0010712551,0.0014197313,0.0013662839,0.000029531428,0.0019637274],"domain_scores_gemma":[0.99773204,0.00054710044,0.0007301843,0.00084067415,0.00005658865,0.00009339833],"candidate_categories":["metaepi_narrow","research_integrity","insufficient_payload"],"consensus_categories":["metaepi_narrow"],"category_scores_codex":[0.0005219696,0.0013628338,0.0035814862,0.0009202265,0.0002848502,0.00007086235,0.001109449,0.0015390676,0.00045303698],"category_scores_gemma":[0.000087307286,0.0012116844,0.0008469161,0.0006322757,0.000918929,0.00023351099,0.00054454716,0.0016761745,0.005496461],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002531499,0.00034620176,0.00006899911,0.0040388885,0.001076344,0.00008832628,0.0010109035,0.0000018141964,0.700409,0.00012405845,0.20976552,0.0828168],"study_design_scores_gemma":[0.00062413287,0.00005117603,0.000039495928,0.0056100185,0.00039712086,0.00035935643,0.000045087505,3.7406047e-9,0.0045937155,0.000004442847,0.9869716,0.0013038305],"about_ca_topic_score_codex":0.00020824322,"about_ca_topic_score_gemma":0.0005259104,"teacher_disagreement_score":0.7772061,"about_ca_system_score_codex":0.0004354868,"about_ca_system_score_gemma":0.00018653362,"threshold_uncertainty_score":0.99991226},"labels":[],"label_agreement":null},{"id":"W2014995328","doi":"10.1016/j.femsle.2004.07.032","title":"ComX activity of growing in biofilms","year":2004,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Antimicrobial Resistance in Staphylococcus","field":"Medicine","cited_by":65,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"National Institute of Dental and Craniofacial Research","keywords":"Biofilm; Quorum sensing; Biology; Reporter gene; Streptococcus mutans; Transformation (genetics); Shuttle vector; Population; Gene; Expression vector; Green fluorescent protein; Microbiology; Gene expression; Cell biology; Bacteria; Genetics; Recombinant DNA; Vector (molecular biology)","score_opus":0.012322574359327088,"score_gpt":0.25357168153014814,"score_spread":0.24124910717082104,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2014995328","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9927382,0.000083741616,0.00026661612,0.006180302,0.00020450774,0.00026675768,0.000023116792,0.000033607346,0.00020313554],"genre_scores_gemma":[0.99422795,0.000013861552,0.0017041588,0.0039360886,0.00004351396,0.0000056560257,0.000022511213,0.000018603256,0.000027673726],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9990121,0.000043681604,0.00026816237,0.00028174094,0.00004037939,0.00035392508],"domain_scores_gemma":[0.9994969,0.00005524398,0.00011268757,0.00026291073,0.000026912985,0.000045340636],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014565811,0.00015830681,0.00042379988,0.00019795835,0.000028473,0.0000032408273,0.00012255137,0.00015748607,0.00002986596],"category_scores_gemma":[0.00004834473,0.00014817638,0.00011820941,0.0002529326,0.0003871974,0.00006985802,0.000047973568,0.00029930173,0.000037334365],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00021979181,0.00011947753,0.019993473,0.00004452636,0.00003648154,0.00009891025,0.00012914432,0.00005681953,0.97822225,0.00006936548,0.0006802627,0.00032950536],"study_design_scores_gemma":[0.0024215986,0.000110905334,0.049670484,0.00022610863,0.000023758346,0.000102505845,0.000036775793,8.240322e-7,0.94574076,0.000014331859,0.0014862969,0.00016562408],"about_ca_topic_score_codex":0.00026161593,"about_ca_topic_score_gemma":0.00005997215,"teacher_disagreement_score":0.032481454,"about_ca_system_score_codex":0.00016447612,"about_ca_system_score_gemma":0.0000713434,"threshold_uncertainty_score":0.6042457},"labels":[],"label_agreement":null},{"id":"W2015065885","doi":"10.1016/j.femsle.2005.01.017","title":"<i>Streptococcus suis</i>serotype 2 binding to extracellular matrix proteins","year":2005,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Streptococcal Infections and Treatments","field":"Medicine","cited_by":52,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal","funders":"","keywords":"Fibronectin; Streptococcus suis; Vitronectin; Laminin; Extracellular matrix; Microbiology; Tenascin; Biology; Bacterial adhesin; Biochemistry; Chemistry; Virulence","score_opus":0.013159293492784803,"score_gpt":0.2775262348071536,"score_spread":0.2643669413143688,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2015065885","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9876724,0.00024099328,0.0005078975,0.009014986,0.00028093654,0.0017266425,0.00004040831,0.00017270433,0.0003430568],"genre_scores_gemma":[0.98686683,0.0000065297368,0.0050839745,0.00246614,0.00044463985,0.0003286469,0.00018598276,0.000043843163,0.0045734146],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.998618,0.000044253993,0.00030554328,0.0004658652,0.000050830942,0.00051548984],"domain_scores_gemma":[0.99926543,0.00003425668,0.00007927889,0.00039105566,0.00004238477,0.00018760074],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00009826198,0.00025775793,0.00033068095,0.00023317443,0.00014383088,0.000021374153,0.00010320086,0.00016495642,0.0007857408],"category_scores_gemma":[0.000028522636,0.00021889796,0.0001592622,0.000271615,0.00009094637,0.00006009932,0.000058996757,0.00024413437,0.0032058426],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000057182206,0.00017654077,0.13145219,0.000010462641,0.00013197046,0.00006888968,0.00006364451,0.000030886647,0.85499555,0.000028274406,0.011374875,0.0016095282],"study_design_scores_gemma":[0.0032151584,0.0006980074,0.028061893,0.00013943382,0.00019056493,0.000568303,0.00003758421,0.0000107094265,0.49204016,0.0000039481592,0.4745278,0.000506419],"about_ca_topic_score_codex":0.00006194772,"about_ca_topic_score_gemma":0.000024253388,"teacher_disagreement_score":0.46315295,"about_ca_system_score_codex":0.00020468626,"about_ca_system_score_gemma":0.000035057863,"threshold_uncertainty_score":0.9975703},"labels":[],"label_agreement":null},{"id":"W2015259086","doi":"10.1111/j.1574-6968.2009.01849.x","title":"Identification of a gene coding for a deglycosylating enzyme in<i>Hypocrea jecorina</i>","year":2009,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Studies on Chitinases and Chitosanases","field":"Biochemistry, Genetics and Molecular Biology","cited_by":66,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Iogen Corporation","funders":"","keywords":"Hypocrea; Trichoderma reesei; Cellulase; Biochemistry; Biology; Gene; Glycoside hydrolase; Enzyme; Microbiology","score_opus":0.009112658674551055,"score_gpt":0.23911508098920223,"score_spread":0.23000242231465118,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2015259086","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99479795,0.0005774619,0.0034288575,0.00067887426,0.00015894487,0.00023213321,0.000081165716,0.000008268172,0.000036336496],"genre_scores_gemma":[0.99694765,0.00006874502,0.0009846023,0.0015568391,0.00016594373,0.000025513622,0.00021879139,0.000010594587,0.000021346894],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9990485,0.00003261335,0.00033612596,0.00030488835,0.000021650589,0.0002562562],"domain_scores_gemma":[0.9995455,0.000033567205,0.00017286897,0.00019229838,0.000033987428,0.000021748274],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012877664,0.00013116313,0.00019115054,0.00005849512,0.00006258012,0.000006585509,0.0001396555,0.00009328348,0.0000020375182],"category_scores_gemma":[0.00008565038,0.0001331149,0.00010362703,0.000071962844,0.00006974165,0.0000026860553,0.000027490329,0.00005134226,0.0000013956474],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007383047,0.00004317059,0.0031396295,0.000011958984,0.000028155277,0.0000017602612,0.000045346893,0.00006819192,0.9942108,0.000033255477,0.0015076475,0.0008362484],"study_design_scores_gemma":[0.0006860063,0.00020378339,0.0065707783,0.000017072065,0.000014730547,0.000024784134,0.00010533083,0.000020699239,0.9905128,0.000016095539,0.0016755109,0.00015241615],"about_ca_topic_score_codex":0.0000117342015,"about_ca_topic_score_gemma":0.000054408698,"teacher_disagreement_score":0.0036980119,"about_ca_system_score_codex":0.000012818191,"about_ca_system_score_gemma":0.00001488798,"threshold_uncertainty_score":0.5428268},"labels":[],"label_agreement":null},{"id":"W2016001814","doi":"10.1111/j.1574-6968.2000.tb08969.x","title":"Mannanase Man26A from<i>Cellulomonas fimi</i>has a mannan-binding module","year":2000,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Enzyme Production and Characterization","field":"Biochemistry, Genetics and Molecular Biology","cited_by":51,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Mannan; Chitin; Locust bean gum; Chemistry; Carbohydrate-binding module; Cellulose; Xylan; Biochemistry; Glycoside hydrolase; Cellulase; Polysaccharide; Enzyme; Chitosan; Materials science","score_opus":0.008824623578773536,"score_gpt":0.19807521715162102,"score_spread":0.1892505935728475,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2016001814","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99232715,0.00026371845,0.000319741,0.0058846893,0.0004768876,0.00016778284,0.00015558371,0.000048904945,0.0003555389],"genre_scores_gemma":[0.9770624,0.00018431664,0.00078823185,0.009683463,0.000839109,0.000030799925,0.005082197,0.00004918224,0.006280292],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9986381,0.000092083836,0.00024984815,0.0006143608,0.00004103687,0.0003645554],"domain_scores_gemma":[0.99924564,0.0000059934687,0.000085094085,0.0005657041,0.00002641344,0.00007115904],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00009059849,0.00023164296,0.00017627775,0.00005761157,0.00016884592,0.000039170856,0.0003123525,0.00022360406,0.000992081],"category_scores_gemma":[0.000015331054,0.00023700298,0.000109638415,0.00008542252,0.00016949854,0.000008631136,0.00008145263,0.00014487587,0.00062736304],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000081173304,0.000045887748,0.0007727519,0.0000045916067,0.000058304217,0.000011139491,0.00006069499,0.00004473966,0.9369493,0.0000033064814,0.060483977,0.0014841327],"study_design_scores_gemma":[0.00046307498,0.00005309149,0.0010932198,0.000009245429,0.000016443513,0.00004559303,0.000015123508,0.000009474608,0.6214291,0.0000093187155,0.37659574,0.0002606059],"about_ca_topic_score_codex":0.000038786107,"about_ca_topic_score_gemma":0.000016710745,"teacher_disagreement_score":0.31611174,"about_ca_system_score_codex":0.000020944697,"about_ca_system_score_gemma":0.000019461499,"threshold_uncertainty_score":0.99992114},"labels":[],"label_agreement":null},{"id":"W2017253768","doi":"10.1016/j.femsle.2004.01.050","title":"Oxygen flux magnitude and location along growing hyphae of<i>Neurospora crassa</i>","year":2004,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Photosynthetic Processes and Mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":12,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"York University","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Hypha; Neurospora crassa; Biology; Oxygen; Flux (metallurgy); Biophysics; Biochemistry; Chemistry; Botany","score_opus":0.004619724660802998,"score_gpt":0.19714427458797842,"score_spread":0.19252454992717544,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2017253768","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99226224,0.00038166196,0.0059786364,0.0009405113,0.00020287314,0.00014605535,0.00002355884,0.000014863448,0.000049603197],"genre_scores_gemma":[0.99449146,0.000072082716,0.0010028718,0.0041045505,0.00007955121,0.000011682036,0.00018239238,0.000021073914,0.000034367156],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9991264,0.000028657309,0.0002068503,0.00035807872,0.000031853528,0.00024815963],"domain_scores_gemma":[0.9995593,0.000008084305,0.00010153608,0.00021863444,0.00006171341,0.00005074312],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012107489,0.0001601309,0.0001697841,0.00004411982,0.00006185125,0.000009455567,0.0001632204,0.0001433243,0.000005219838],"category_scores_gemma":[0.00004351538,0.0001565431,0.000047093265,0.0000868829,0.00015563684,0.0000075280896,0.00010301995,0.00008350188,0.000007869803],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00003126403,0.000030298888,0.0002530573,0.000029779452,0.000031725955,0.0000069911725,0.000047024456,0.00007938545,0.9989524,0.000078653095,0.00015991091,0.00029953604],"study_design_scores_gemma":[0.00061612047,0.00013618033,0.00058287935,0.000024898545,0.000022499853,0.00018654043,0.000037570466,0.0000012077165,0.9940563,0.00009714681,0.004069816,0.00016887754],"about_ca_topic_score_codex":0.000053139815,"about_ca_topic_score_gemma":0.000016801316,"teacher_disagreement_score":0.004975765,"about_ca_system_score_codex":0.000011519133,"about_ca_system_score_gemma":0.000053429758,"threshold_uncertainty_score":0.63836426},"labels":[],"label_agreement":null},{"id":"W2017391093","doi":"10.1111/j.1574-6968.2006.00388.x","title":"Developing insect models for the study of current and emerging human pathogens","year":2006,"lang":"en","type":"review","venue":"FEMS Microbiology Letters","topic":"Insect symbiosis and bacterial influences","field":"Agricultural and Biological Sciences","cited_by":83,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Brock University","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Biology; Insect; Human pathogen; Ecology; Evolutionary biology; Genetics; Gene","score_opus":0.12652144307397203,"score_gpt":0.31660542589301843,"score_spread":0.1900839828190464,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2017391093","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.39997587,0.59822756,0.0000056626905,0.000099513716,0.0003542104,0.0011140952,0.0002050189,0.000015521395,0.0000025591796],"genre_scores_gemma":[0.042837404,0.9548927,0.0000473146,0.00031288288,0.0007956009,0.00036365888,0.0007339871,0.0000066229777,0.000009860307],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99843895,0.00020702864,0.00058753195,0.00041898928,0.000039589537,0.00030791468],"domain_scores_gemma":[0.9990699,0.0003529799,0.00043645015,0.000080510195,0.00004113748,0.00001897373],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00031955398,0.00031815824,0.0008826072,0.000029153072,0.00041763778,0.00004292502,0.00038676587,0.00015552946,0.00000799588],"category_scores_gemma":[0.000008343146,0.000097474454,0.00023937615,0.00016365827,0.0001367611,0.00004154114,0.00013558574,0.00017391761,0.0000014077342],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000007300086,0.0001341592,0.00011518563,0.0009178629,0.00020968913,0.0000016006182,0.00022574145,0.0000032942798,0.19369325,0.00013647818,0.000867225,0.8036882],"study_design_scores_gemma":[0.00017975223,0.00032438096,0.000497474,0.0012686664,0.00041836355,0.000020351761,0.00012398051,0.0000013187044,0.00008052484,0.00005038465,0.9965202,0.0005146025],"about_ca_topic_score_codex":0.0002870354,"about_ca_topic_score_gemma":0.0004677274,"teacher_disagreement_score":0.995653,"about_ca_system_score_codex":0.000028998107,"about_ca_system_score_gemma":0.0000123283435,"threshold_uncertainty_score":0.39748928},"labels":[],"label_agreement":null},{"id":"W2017469118","doi":"10.1111/j.1574-6968.2000.tb09360.x","title":"Sequencing and characterization of a novel serine metalloprotease from Burkholderia pseudomallei","year":2000,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Burkholderia infections and melioidosis","field":"Medicine","cited_by":51,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"National Defence Medical Centre","funders":"","keywords":"Burkholderia pseudomallei; Biology; Microbiology; Proteases; Virulence; Serine protease; Burkholderia; Peptide sequence; Protease; Open reading frame; Nucleic acid sequence; TMPRSS6; Hemolysin; Lecithinase; Bacteria; Genetics; Gene; Biochemistry; Enzyme","score_opus":0.01596710958568632,"score_gpt":0.2196324282164643,"score_spread":0.203665318630778,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2017469118","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9965399,0.00004931461,0.00067485095,0.001945616,0.00016981573,0.0003547479,0.00012903656,0.00005312795,0.000083596286],"genre_scores_gemma":[0.99318695,0.00008082786,0.0030454434,0.0027724823,0.0001600105,0.00003038195,0.00047984676,0.000022989756,0.00022103859],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9991485,0.000031038708,0.0002885581,0.00029858793,0.00003311272,0.00020023544],"domain_scores_gemma":[0.9995479,0.000020231788,0.000095837524,0.00022772005,0.000035102246,0.00007323763],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00008800518,0.00016485369,0.00035576362,0.00010484796,0.00005738786,0.000009431031,0.00004966854,0.0001280736,0.000897322],"category_scores_gemma":[0.000011762736,0.00014823067,0.000074230724,0.00013659599,0.00015298017,0.000079259036,0.00002410527,0.00013733299,0.000018293838],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011129057,0.00007788886,0.0018035438,0.000025685258,0.00013543133,0.0000113523665,0.00015337735,0.000004323452,0.99582475,0.0000070818483,0.000087937595,0.0017573269],"study_design_scores_gemma":[0.004658439,0.00026265837,0.07475974,0.0001984669,0.00031994176,0.00078301213,0.00004611197,0.00014872848,0.90147567,0.0000037641846,0.016995616,0.00034784753],"about_ca_topic_score_codex":0.0004230452,"about_ca_topic_score_gemma":0.0000067449355,"teacher_disagreement_score":0.09434909,"about_ca_system_score_codex":0.00003942287,"about_ca_system_score_gemma":0.000031633193,"threshold_uncertainty_score":0.9825047},"labels":[],"label_agreement":null},{"id":"W2018372716","doi":"10.1111/j.1574-6968.2000.tb09423.x","title":"Production of green fluorescent protein by the methylotrophic bacterium<i>Methylobacterium extorquens</i>","year":2000,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Microbial Metabolic Engineering and Bioproduction","field":"Biochemistry, Genetics and Molecular Biology","cited_by":26,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Biotechnology Research Institute","funders":"","keywords":"Green fluorescent protein; Electroporation; Plasmid; Methylobacterium; Promoter; Biology; Expression vector; Chemistry; Molecular biology; Bacteria; Gene; Gene expression; Recombinant DNA; Biochemistry; Genetics","score_opus":0.003959892959791339,"score_gpt":0.18543349359756223,"score_spread":0.18147360063777088,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2018372716","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99403614,0.0007255865,0.000097955824,0.0039505456,0.00064452965,0.00043854295,0.000060714658,0.00002813285,0.000017840488],"genre_scores_gemma":[0.9943609,0.00015824178,0.00056664,0.0008837191,0.0008794077,0.00004637588,0.0004212639,0.00003678759,0.0026466534],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99862933,0.0001847854,0.00031481142,0.00049417705,0.00004924458,0.00032766786],"domain_scores_gemma":[0.99924415,0.0000026933046,0.00011800437,0.00053809356,0.000056602366,0.000040454135],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00028354026,0.00023668185,0.00022500812,0.000040842224,0.0000843239,0.0000110078545,0.00028010266,0.00017697722,0.00007355675],"category_scores_gemma":[0.000030314006,0.00017557095,0.000117855074,0.00014043569,0.000289744,0.0000060131097,0.000047388414,0.00017659979,0.000026884807],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011619462,0.000049525104,0.000055277265,0.00002292074,0.00007599554,5.465062e-7,0.00004552963,0.000043918953,0.98046625,0.0000019790953,0.014826098,0.004295746],"study_design_scores_gemma":[0.00018773637,0.00009248537,0.00047909547,0.000012698683,0.000021143525,0.00007430497,0.0000060996963,5.989776e-7,0.8011742,0.000001268081,0.19778737,0.0001629921],"about_ca_topic_score_codex":0.00014705812,"about_ca_topic_score_gemma":0.000008347292,"teacher_disagreement_score":0.18296127,"about_ca_system_score_codex":0.000017289198,"about_ca_system_score_gemma":0.000018917588,"threshold_uncertainty_score":0.7159576},"labels":[],"label_agreement":null},{"id":"W2018564148","doi":"10.1016/s0378-1097(03)00930-3","title":"An extra large insertion in the polyhydroxyalkanoate synthase from<i>Delftia acidovorans</i>DS-17: its deletion effects and relation to cellular proteolysis","year":2004,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"biodegradable polymer synthesis and properties","field":"Materials Science","cited_by":21,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Public Health Agency of Canada","keywords":"Proteolysis; Mutant; Escherichia coli; Biology; Wild type; Biochemistry; Insertion sequence; Molecular biology; Enzyme; ATP synthase; Recombinant DNA; Gene; Transposable element","score_opus":0.008916321732471044,"score_gpt":0.201249872294322,"score_spread":0.19233355056185097,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2018564148","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98587567,0.0023353177,0.004381996,0.0063716136,0.00027767548,0.00060907996,0.00007816477,0.00006234101,0.000008120069],"genre_scores_gemma":[0.99405044,0.000020333484,0.00085792894,0.0047153016,0.00009675332,0.00012692934,0.00010333316,0.000020094545,0.000008893985],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9980627,0.0005411993,0.0003237992,0.00053922023,0.00008898865,0.00044410903],"domain_scores_gemma":[0.9993613,0.00008399995,0.00010962012,0.0003545838,0.000020752392,0.00006974361],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00060037326,0.0002464944,0.00026862815,0.00013627233,0.00027147666,0.00010278935,0.00030285073,0.00021856901,0.00006745115],"category_scores_gemma":[0.000036390837,0.00017377912,0.00005206981,0.00019481564,0.000101109224,0.00030482278,0.00004187954,0.00020485249,0.0001261008],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012439168,0.000091778515,0.0003902247,0.000019829442,0.00001041551,0.000019850702,0.0020695655,0.000057529094,0.9962986,0.00002901249,0.00007609319,0.00081272575],"study_design_scores_gemma":[0.0006522966,0.00014864295,0.004053274,0.00007750573,0.00003711991,0.000019571351,0.00008155569,0.00006768041,0.9939152,0.000035975172,0.0006603887,0.00025081437],"about_ca_topic_score_codex":0.0009194313,"about_ca_topic_score_gemma":0.00022324182,"teacher_disagreement_score":0.008174741,"about_ca_system_score_codex":0.000059153757,"about_ca_system_score_gemma":0.000020114207,"threshold_uncertainty_score":0.70865065},"labels":[],"label_agreement":null},{"id":"W2020479918","doi":"10.1111/j.1574-6968.2001.tb10953.x","title":"Vacuolar H+-ATPase, but not mitochondrial F1F0-ATPase, is required for aluminum resistance in Saccharomyces cerevisiae","year":2001,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Aluminum toxicity and tolerance in plants and animals","field":"Agricultural and Biological Sciences","cited_by":26,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"Natural Sciences and Engineering Research Council of Canada; Directorate for Biological Sciences","keywords":"Saccharomyces cerevisiae; ATPase; Biology; Mutant; Biochemistry; Yeast; Vacuole; Mitochondrion; Enzyme; V-ATPase; Cell biology; Gene","score_opus":0.02219435378649175,"score_gpt":0.22502854024942884,"score_spread":0.20283418646293708,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2020479918","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.978528,0.0005089821,0.000022897759,0.018452808,0.0006014196,0.0005485227,0.0010960693,0.000069367314,0.00017188302],"genre_scores_gemma":[0.9808813,0.00022968047,0.00069750455,0.014787544,0.0013157793,0.00009268598,0.000456667,0.0000055404003,0.0015333473],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.99768853,0.00012000567,0.0005415567,0.0007615982,0.000089763,0.00079852465],"domain_scores_gemma":[0.9991463,0.00035744993,0.00021839933,0.00013109503,0.000047841037,0.00009892255],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00025027242,0.0003433787,0.0005290256,0.000041426618,0.00032100792,0.00008184168,0.00051864353,0.00031739334,0.00045553962],"category_scores_gemma":[0.000052248026,0.00016960393,0.00023484752,0.0002838224,0.00021817614,0.00021115366,0.00006744112,0.00024294884,0.00010058535],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00052027375,0.00008043443,0.0032992659,0.00001403261,0.000028762845,0.000051206353,0.00010998121,0.0000011484308,0.95102704,0.000061021092,0.04297217,0.0018346492],"study_design_scores_gemma":[0.001731612,0.00033568763,0.02693438,0.00020742501,0.000038185048,0.00008811414,0.00024468816,0.000013851327,0.094488524,0.0002715557,0.87467045,0.0009755188],"about_ca_topic_score_codex":0.00021677848,"about_ca_topic_score_gemma":0.001553826,"teacher_disagreement_score":0.85653853,"about_ca_system_score_codex":0.00004900641,"about_ca_system_score_gemma":0.000012849518,"threshold_uncertainty_score":0.69162476},"labels":[],"label_agreement":null},{"id":"W2020773828","doi":"10.1111/j.1574-6968.2006.00372.x","title":"Sequence and comparative genomic analysis of lactococcal bacteriophages jj50, 712 and P008: evolutionary insights into the 936 phage species","year":2006,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Bacteriophages and microbial interactions","field":"Environmental Science","cited_by":69,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"Science Foundation Ireland; Irish Research Council for Science, Engineering and Technology","keywords":"Biology; Bacteriophage; Sequence (biology); Sequence analysis; Computational biology; Genetics; Microbiology; Gene; Escherichia coli","score_opus":0.015093049265240145,"score_gpt":0.22690156250698468,"score_spread":0.21180851324174454,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2020773828","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9978395,0.00037644766,0.000089427645,0.0009432691,0.000103743005,0.00021063101,0.0000724107,0.000015427715,0.0003491291],"genre_scores_gemma":[0.99814826,0.00006681853,0.00044022372,0.00081896276,0.000040975312,0.000012239469,0.000118943695,0.000006304393,0.00034725497],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9989742,0.00014890733,0.00027373893,0.00035444702,0.00003281432,0.00021590583],"domain_scores_gemma":[0.9994707,0.00013394201,0.00015499807,0.0001946537,0.000009424859,0.000036271424],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000081317805,0.00018592809,0.00031557167,0.00010130286,0.00027015532,0.00003108452,0.00017603273,0.00007660719,0.00045061737],"category_scores_gemma":[0.0000040964715,0.00013565912,0.00008757526,0.00026107568,0.0014645098,0.00017314419,0.00021439692,0.00018779846,0.000039083367],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000020827074,0.000030272402,0.01032752,0.000003081162,0.00015228314,0.0000058992932,0.001519824,0.00016425732,0.9859982,0.000044871664,0.0016238714,0.00010910767],"study_design_scores_gemma":[0.00020773338,0.000041718587,0.9418624,0.0000071594695,0.00019991904,0.000049983166,0.0002257988,0.00012502303,0.026813535,0.000015690926,0.030268675,0.00018237214],"about_ca_topic_score_codex":0.0022003625,"about_ca_topic_score_gemma":0.0017353492,"teacher_disagreement_score":0.95918465,"about_ca_system_score_codex":0.00010680127,"about_ca_system_score_gemma":0.000005942213,"threshold_uncertainty_score":0.55320185},"labels":[],"label_agreement":null},{"id":"W2021208061","doi":"10.1016/s0378-1097(03)00163-0","title":"Direct sequencing and PCR mapping of integrons reveals multiple class 1 integrons in the multiresistant strain<i>Enterobacter cloacae</i>SCH88040794","year":2003,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Antibiotic Resistance in Bacteria","field":"Biochemistry, Genetics and Molecular Biology","cited_by":10,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval; Centre hospitalier de l'Université Laval","funders":"Canadian Institutes of Health Research","keywords":"Integron; Enterobacter cloacae; Microbiology; Amikacin; Biology; Amplicon; Strain (injury); Gentamicin; Polymerase chain reaction; Gene; Enterobacteriaceae; Genetics; Antibiotics; Escherichia coli; Antibiotic resistance","score_opus":0.015051132428626228,"score_gpt":0.22234781247099972,"score_spread":0.20729668004237348,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2021208061","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9970367,0.00038060112,0.000781899,0.00062221417,0.00023317638,0.00038202005,0.00016422204,0.000011404347,0.00038776433],"genre_scores_gemma":[0.99521065,0.000099658,0.0022946135,0.002044922,0.000056292345,0.000015019674,0.00017056869,0.000029320136,0.00007893789],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9977779,0.0005649065,0.0005424649,0.0005607634,0.0000555409,0.00049844803],"domain_scores_gemma":[0.9990121,0.00014847462,0.00023500437,0.0005128977,0.000042820186,0.00004869369],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006900974,0.0003067226,0.0003880585,0.000103026956,0.000089501904,0.00002830912,0.00036759954,0.00025942113,0.000013541326],"category_scores_gemma":[0.0003079218,0.00023499054,0.00012707259,0.00013543713,0.000553451,0.000010201257,0.00009378073,0.0002968286,0.0000039646575],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000055881785,0.000036594978,0.07375672,0.00003449438,0.00007005252,0.000013637721,0.00042579017,0.000008318881,0.9241217,0.00006747454,0.0013351373,0.00007422571],"study_design_scores_gemma":[0.0038346373,0.0004314519,0.19480382,0.00067294383,0.0000994443,0.000601518,0.0069418983,0.000028023602,0.7214795,0.000058721347,0.069628894,0.0014191483],"about_ca_topic_score_codex":0.00006126255,"about_ca_topic_score_gemma":0.00031452047,"teacher_disagreement_score":0.20264217,"about_ca_system_score_codex":0.00006646705,"about_ca_system_score_gemma":0.000053975116,"threshold_uncertainty_score":0.95826364},"labels":[],"label_agreement":null},{"id":"W2021284680","doi":"10.1111/j.1574-6968.2007.00735.x","title":"Mutagenesis of the carboxy terminal protease CtpA decreases desiccation tolerance in<i>Rhizobium leguminosarum</i>","year":2007,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Legume Nitrogen Fixing Symbiosis","field":"Agricultural and Biological Sciences","cited_by":32,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Regina","funders":"","keywords":"Rhizobium leguminosarum; Proteases; Mutant; Biology; Protease; Rhizobiaceae; Desiccation; Gene; Mutagenesis; Microbiology; Molecular biology; Biochemistry; Genetics; Botany; Bacteria; Enzyme","score_opus":0.008527348766768614,"score_gpt":0.19725037394935466,"score_spread":0.18872302518258605,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2021284680","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99669385,0.000119121265,0.0000028761451,0.0023498954,0.00026751158,0.00044196472,0.0000415924,0.000031411022,0.00005176416],"genre_scores_gemma":[0.99694675,0.0000014445135,0.00016522937,0.0026324966,0.0001497664,0.0000244802,0.00003973513,0.0000021231358,0.00003796905],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9985956,0.00016883068,0.00037357205,0.00035085643,0.000075832395,0.00043530957],"domain_scores_gemma":[0.9993448,0.00020506307,0.00021164674,0.00013740208,0.00004593521,0.000055130422],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00039974143,0.00018844797,0.00022657779,0.000024235867,0.00011837456,0.000012869105,0.0004702702,0.00014733,0.000044699293],"category_scores_gemma":[0.00007170365,0.00007574178,0.00014760715,0.00041305518,0.0002653272,0.000072922645,0.00008728752,0.00016017864,0.000017435006],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000047256035,0.00006245886,0.17980736,0.0000060939,0.000008652467,0.000008785314,0.00007384427,9.460163e-7,0.817883,0.00000494935,0.00032498458,0.0017716618],"study_design_scores_gemma":[0.0001327538,0.00003629459,0.4048496,0.00002945588,0.000011482762,0.00003672989,0.00004580249,8.2588565e-7,0.5942234,0.000007595302,0.0005034298,0.00012266733],"about_ca_topic_score_codex":0.0010875334,"about_ca_topic_score_gemma":0.0010271303,"teacher_disagreement_score":0.22504222,"about_ca_system_score_codex":0.00006829101,"about_ca_system_score_gemma":0.000016729851,"threshold_uncertainty_score":0.30886602},"labels":[],"label_agreement":null},{"id":"W2022179869","doi":"10.1111/j.1574-6968.2003.tb11492.x","title":"Iron-regulated phenylalanyl-tRNA synthetase activity in<i>Azotobacter vinelandii</i>","year":2003,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"RNA and protein synthesis mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Azotobacter vinelandii; Mutant; Biology; Gene; Mutagenesis; Plasmid; Strain (injury); Reporter gene; Mutation; DNA; Genetics; Molecular biology; Gene expression; Bacteria; Nitrogenase; Nitrogen fixation","score_opus":0.006160619645919776,"score_gpt":0.20136509040043063,"score_spread":0.19520447075451086,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2022179869","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99714243,0.0002066883,0.0007991374,0.00060092844,0.00040466362,0.00032132244,0.00006478415,0.000025152542,0.00043488241],"genre_scores_gemma":[0.9965222,0.000029377008,0.00063528446,0.0021178254,0.000087906024,0.00004903322,0.00020291547,0.000040251023,0.00031521101],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9981995,0.00036037943,0.00024837998,0.00059762463,0.000045609308,0.00054848363],"domain_scores_gemma":[0.99923325,0.000029013554,0.00012290275,0.00051066215,0.000021429383,0.000082770835],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00033215096,0.00030844408,0.00029472087,0.00008941957,0.000080388665,0.000020154916,0.0002497069,0.0003546278,0.00013259544],"category_scores_gemma":[0.00007285082,0.00028356604,0.00013761665,0.00010693594,0.00014029891,0.000007043651,0.00006631471,0.00016955384,0.00009824925],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009385285,0.00007903438,0.004493002,0.000009095796,0.000048367107,0.000021165637,0.000023432596,0.000027085034,0.9926109,0.000025590947,0.002025178,0.00054332253],"study_design_scores_gemma":[0.0007911948,0.000094822826,0.002067189,0.000018752155,0.000015688152,0.00008597799,0.000010397104,0.0000015403984,0.9517826,0.000022562994,0.04474244,0.00036684892],"about_ca_topic_score_codex":0.000034263525,"about_ca_topic_score_gemma":0.000043604363,"teacher_disagreement_score":0.04271726,"about_ca_system_score_codex":0.000032428372,"about_ca_system_score_gemma":0.00004001398,"threshold_uncertainty_score":0.9999617},"labels":[],"label_agreement":null},{"id":"W2022318552","doi":"10.1111/j.1574-6968.2000.tb09313.x","title":"Molecular differentiation of<i>Bifidobacterium</i>species with amplified ribosomal DNA restriction analysis and alignment of short regions of the<i>ldh</i>gene","year":2000,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Genomics and Phylogenetic Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":92,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Agriculture and Agri-Food Canada","funders":"","keywords":"Bifidobacterium animalis; Restriction enzyme; Biology; Bifidobacterium longum; Amplified Ribosomal DNA Restriction Analysis; BamHI; Molecular biology; Gene; Genetics; Ribosomal RNA; TaqI; Bifidobacterium; Primer (cosmetics); 16S ribosomal RNA; Polymerase chain reaction; Ribosomal DNA; Lactobacillus; Restriction fragment length polymorphism; Bacteria; Phylogenetic tree; Chemistry","score_opus":0.005475541579928044,"score_gpt":0.18025014156414962,"score_spread":0.17477459998422157,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2022318552","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99826676,0.0002497288,0.00089724356,0.00023495658,0.00004532375,0.00014573276,0.00011321534,0.0000013904049,0.00004565418],"genre_scores_gemma":[0.9990373,0.00035968178,0.00026479975,0.00014433076,0.000020228586,0.000008122203,0.00013083029,0.000008339831,0.000026367365],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99924624,0.000073010735,0.00026094855,0.00024137406,0.000043352473,0.00013509882],"domain_scores_gemma":[0.9994712,0.000010665281,0.00014644113,0.0003032426,0.000048879385,0.000019576135],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00005367376,0.00013181196,0.0002575583,0.000059999235,0.00004554755,0.000003124834,0.00012343105,0.00008389427,0.000005339218],"category_scores_gemma":[0.000004488487,0.00009779099,0.00012705266,0.00016903614,0.00030927887,8.088389e-7,0.000059666098,0.000038296104,1.0802366e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007844619,0.000035212015,0.06923696,0.000008881458,0.0007516532,3.169793e-7,0.000061410574,0.0004029454,0.92926705,0.00002180893,0.00006286313,0.0000724408],"study_design_scores_gemma":[0.00019270986,0.00010719589,0.26573926,0.000005810366,0.00026127117,0.0000053036897,0.000019055498,0.0000021546728,0.73323697,0.0000047416656,0.00034886226,0.00007663535],"about_ca_topic_score_codex":0.00005027651,"about_ca_topic_score_gemma":0.0000451114,"teacher_disagreement_score":0.19650231,"about_ca_system_score_codex":0.000007251386,"about_ca_system_score_gemma":0.000013842527,"threshold_uncertainty_score":0.39878008},"labels":[],"label_agreement":null},{"id":"W2022456957","doi":"10.1111/j.1574-6968.2006.00565.x","title":"Generation and annotation of lodgepole pine and oleoresin-induced expressed sequences from the blue-stain fungus<i>Ophiostoma clavigerum</i>, a Mountain Pine Beetle-associated pathogen","year":2006,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Forest Insect Ecology and Management","field":"Environmental Science","cited_by":47,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"BC Cancer Agency; Canada's Michael Smith Genome Sciences Centre; University of British Columbia","funders":"Natural Sciences and Engineering Research Council of Canada; Canada's Michael Smith Genome Sciences Centre","keywords":"Pinus contorta; Biology; Expressed sequence tag; Dendroctonus; cDNA library; Ophiostoma; Mountain pine beetle; Fungus; Botany; Ceratocystis; Bark beetle; Complementary DNA; Genetics; Gene; Twig; Ecology","score_opus":0.008545186424337926,"score_gpt":0.1985295957913311,"score_spread":0.18998440936699315,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2022456957","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99576527,0.0001999798,0.00018089399,0.003181725,0.00011908538,0.00035546772,0.00013199045,0.000027123193,0.00003849211],"genre_scores_gemma":[0.99594253,0.00002496171,0.000303829,0.0030687077,0.00006162191,0.000028926972,0.00049717905,0.000011089118,0.00006115182],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9987801,0.00024890507,0.00027841888,0.00037089174,0.000059254326,0.00026242863],"domain_scores_gemma":[0.9994737,0.00010526895,0.0002071945,0.00017668719,0.000010411901,0.000026725002],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00029317374,0.00017060009,0.00019174247,0.00003881966,0.00020989434,0.00002152571,0.00014783359,0.00014164232,0.000089703186],"category_scores_gemma":[0.000030153951,0.00013600821,0.000030602085,0.00013624517,0.0004937861,0.00010633938,0.00012897386,0.00011878883,0.000014119417],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000029139836,0.000045852747,0.027754385,0.0000030788476,0.000032031254,0.000011002802,0.00044128427,0.0005241649,0.96309483,0.000054021577,0.0077265063,0.00028371686],"study_design_scores_gemma":[0.0015115526,0.00027621625,0.86621803,0.00002217543,0.00008342533,0.000019485255,0.00021699653,0.0007420928,0.12773685,0.0004949406,0.0023053733,0.00037284204],"about_ca_topic_score_codex":0.0032657073,"about_ca_topic_score_gemma":0.0038057615,"teacher_disagreement_score":0.83846366,"about_ca_system_score_codex":0.00008111726,"about_ca_system_score_gemma":0.000007992415,"threshold_uncertainty_score":0.5546254},"labels":[],"label_agreement":null},{"id":"W2023099022","doi":"10.1111/1574-6968.12403","title":"Phenotypic investigations of the depletion of EngA in<i>Escherichia coli</i>are consistent with a role in ribosome biogenesis","year":2014,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"RNA and protein synthesis mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":24,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"Canadian Institutes of Health Research","keywords":"Ribosome biogenesis; Ribosome; Biology; Biogenesis; Cell biology; 50S; Escherichia coli; Ribosomal protein; Ribosomal RNA; Genetics; RNA; Gene","score_opus":0.006400100710059995,"score_gpt":0.18126131742062399,"score_spread":0.17486121671056398,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2023099022","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99809086,0.00019761887,0.0003673673,0.00095650693,0.00006405765,0.0002546405,0.000032935834,0.0000033035872,0.000032692766],"genre_scores_gemma":[0.9974272,0.0000123246755,0.0011436223,0.001293026,0.000022700668,0.00003947197,0.000037423346,0.000012671733,0.000011550879],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9990152,0.0003007172,0.0002556206,0.00022483981,0.00003382508,0.00016977206],"domain_scores_gemma":[0.9994138,0.00003112022,0.00020690748,0.00029366266,0.000032652733,0.000021849639],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00021684093,0.00012152814,0.00020999851,0.000062644736,0.000030159252,0.0000026606283,0.00019283756,0.00013976858,0.0000050239114],"category_scores_gemma":[0.00006714795,0.000090465546,0.0000611637,0.00015677918,0.00025721642,0.000002364695,0.00005424347,0.00007039537,0.000001520215],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000051205538,0.00003616492,0.08316978,0.000016723314,0.000023513547,2.8548948e-7,0.00007371474,0.00012743728,0.9163066,0.00006304814,0.00005376057,0.00007777276],"study_design_scores_gemma":[0.00048084723,0.00009538888,0.04816719,0.00006280643,0.000012071376,0.0000050166786,0.00006372333,0.000005102296,0.9496411,0.000050388448,0.0013093026,0.000107036576],"about_ca_topic_score_codex":0.00012482353,"about_ca_topic_score_gemma":0.00049627403,"teacher_disagreement_score":0.03500259,"about_ca_system_score_codex":0.000012668287,"about_ca_system_score_gemma":0.00003788721,"threshold_uncertainty_score":0.3689078},"labels":[],"label_agreement":null},{"id":"W2023699434","doi":"10.1016/s0378-1097(03)00304-5","title":"Distinguishing<i>Ophiostoma ips</i>and<i>Ophiostoma montium</i>, two bark beetle-associated sapstain fungi","year":2003,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Forest Insect Ecology and Management","field":"Environmental Science","cited_by":54,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"Ophiostoma; Bark beetle; Dendroctonus; Biology; Mountain pine beetle; Bark (sound); Gene; Internal transcribed spacer; Botany; Ascomycota; Genetics; Phylogenetic tree; Fungus; Ecology","score_opus":0.004467479653608473,"score_gpt":0.18926939745587756,"score_spread":0.1848019178022691,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2023699434","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99144036,0.00016655713,0.00010283898,0.0011178164,0.00087067985,0.00042447564,0.00003298141,0.00016271902,0.005681603],"genre_scores_gemma":[0.985431,0.000019771136,0.0008736888,0.012642617,0.00003915857,0.000045287485,0.00007692755,0.00003922096,0.00083232246],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99751204,0.00037476397,0.00038165195,0.0007509015,0.00008963023,0.00089098356],"domain_scores_gemma":[0.99906695,0.00018325997,0.00020279325,0.0003926664,0.00001101544,0.00014330746],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00068045495,0.00037033085,0.00036819302,0.000089473884,0.00042135944,0.00003973843,0.00038164196,0.0002253437,0.000902989],"category_scores_gemma":[0.0002563781,0.00036610174,0.00011234745,0.00031119876,0.0007184135,0.00014240647,0.00032146877,0.0003872322,0.0007817134],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00004984188,0.00017356065,0.11138845,0.000010902833,0.00013573897,0.0002390917,0.0006036414,0.00037034065,0.77919894,0.0011865383,0.10617223,0.00047071316],"study_design_scores_gemma":[0.005598115,0.0006334721,0.7089944,0.000067154055,0.0002510556,0.0006794861,0.0002797673,0.00013597326,0.009999781,0.0019124033,0.2692151,0.002233285],"about_ca_topic_score_codex":0.00032206942,"about_ca_topic_score_gemma":0.0011305581,"teacher_disagreement_score":0.7691992,"about_ca_system_score_codex":0.0002746098,"about_ca_system_score_gemma":0.000011941186,"threshold_uncertainty_score":0.9999963},"labels":[],"label_agreement":null},{"id":"W2024011853","doi":"10.1016/s0378-1097(03)00512-3","title":"Characterization of species-specific genes using a flexible, web-based querying system","year":2003,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Genomics and Phylogenetic Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":28,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Google (Canada); Genome Canada; University of Ottawa","funders":"Natural Sciences and Engineering Research Council of Canada; Genome Canada","keywords":"Gene; Computational biology; Web application; Biology; Computer science; World Wide Web; Genetics","score_opus":0.01675013415934453,"score_gpt":0.20473107554340964,"score_spread":0.1879809413840651,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2024011853","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9938251,0.0008901643,0.0042413385,0.00006629429,0.00052793475,0.00018677278,0.00009680905,0.000008382802,0.00015725012],"genre_scores_gemma":[0.99727535,0.00010083644,0.0018373474,0.00040965097,0.00013851697,0.000009835257,0.00015845204,0.000025454574,0.000044546476],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9989422,0.00012377865,0.0002914335,0.00034120664,0.000031406886,0.00026999816],"domain_scores_gemma":[0.99942994,0.000011056842,0.00018191308,0.00028285792,0.00006258645,0.000031633303],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015431593,0.00018805757,0.00024273936,0.000079764264,0.000100338264,0.0000107134565,0.00013461472,0.00013412115,0.000010225092],"category_scores_gemma":[0.000008412358,0.00018563644,0.00010863556,0.00009693891,0.00015300223,8.3228826e-7,0.00004099974,0.00005360855,0.000004806866],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000029262756,0.00001845661,0.007135591,0.000030286965,0.00006587851,0.0000018922484,0.000020988531,0.00022370927,0.9921667,0.000107411455,0.00014095381,0.000058877995],"study_design_scores_gemma":[0.0004967495,0.00005282872,0.0022320095,0.00002191082,0.00001756397,0.000035281515,0.000042646694,0.000022040691,0.9399767,7.377906e-7,0.05690759,0.00019394828],"about_ca_topic_score_codex":0.000005794805,"about_ca_topic_score_gemma":0.00000272816,"teacher_disagreement_score":0.056766637,"about_ca_system_score_codex":0.000031482872,"about_ca_system_score_gemma":0.000054832657,"threshold_uncertainty_score":0.7570034},"labels":[],"label_agreement":null},{"id":"W2024078883","doi":"10.1111/j.1574-6968.2009.01689.x","title":"Tryptophan auxotrophs were obtained by random transposon insertions in the<i>Methanococcus maripaludis</i>tryptophan operon","year":2009,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Biofuel production and bioconversion","field":"Engineering","cited_by":11,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Oak Ridge National Laboratory; National Institutes of Health; National Institute of General Medical Sciences; Queen's University","keywords":"Methanococcus; Operon; Transposable element; Genetics; trp operon; Biology; Auxotrophy; Tryptophan; Transformation (genetics); Chemistry; Gene; Genome; Archaea; Amino acid; Mutant","score_opus":0.006130485261189905,"score_gpt":0.1947948034029749,"score_spread":0.188664318141785,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2024078883","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9760565,0.0009430822,0.00084219786,0.020089747,0.00086049264,0.00055458717,0.000060491257,0.0002345291,0.00035838282],"genre_scores_gemma":[0.990685,0.00019412789,0.00019045504,0.008322403,0.00017373924,0.00002839107,0.00026885705,0.000021938045,0.00011508084],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9985495,0.00019239032,0.00034587926,0.0003687371,0.00005937674,0.0004840994],"domain_scores_gemma":[0.99951833,0.00003912298,0.0000416089,0.0003282496,0.000014120307,0.000058550664],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00023768489,0.0002979177,0.0003058762,0.00015589522,0.00012356216,0.000033175318,0.00037630522,0.00025949036,0.00013038098],"category_scores_gemma":[0.0000084281855,0.00023131877,0.00013495826,0.00028782955,0.00012664312,0.00012300098,0.000011353449,0.00047513325,0.00008798846],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001160177,0.000062194515,0.00013199326,0.000021481237,0.000024691764,0.000012216338,0.00048900093,0.0002040429,0.9474356,0.000008762569,0.049950354,0.001543612],"study_design_scores_gemma":[0.01158419,0.00045227635,0.007841561,0.0000847796,0.00009082347,0.0002199122,0.0005281086,0.00037847646,0.5617462,0.00012276108,0.41559365,0.0013572339],"about_ca_topic_score_codex":0.00003455731,"about_ca_topic_score_gemma":0.000013455687,"teacher_disagreement_score":0.38568944,"about_ca_system_score_codex":0.00009157883,"about_ca_system_score_gemma":0.000010644334,"threshold_uncertainty_score":0.9432906},"labels":[],"label_agreement":null},{"id":"W2025423007","doi":"10.1111/j.1574-6968.2009.01802.x","title":"Characterization of SgcE6, the flavin reductase component supporting FAD-dependent halogenation and hydroxylation in the biosynthesis of the enediyne antitumor antibiotic C-1027","year":2009,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Microbial Natural Products and Biosynthesis","field":"Medicine","cited_by":19,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Cancer Institute; Natural Sciences and Engineering Research Council of Canada; National Institutes of Health; Chinese Academy of Medical Sciences","keywords":"Flavin group; Hydroxylation; Enediyne; Biosynthesis; Flavin adenine dinucleotide; Stereochemistry; Reductase; Chemistry; Enzyme; Flavoprotein; Monooxygenase; Biochemistry; Oxidoreductase; Cofactor; Cytochrome P450","score_opus":0.008181439304515151,"score_gpt":0.22201918621576558,"score_spread":0.21383774691125043,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2025423007","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.948484,0.00010140505,0.000014855209,0.050513577,0.00016216583,0.00065223745,0.00004895303,0.0000086002365,0.000014222655],"genre_scores_gemma":[0.99681604,0.000058218026,0.00006616139,0.0028221244,0.00008951141,5.7822405e-7,0.00012115135,0.0000076600645,0.00001853357],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9986796,0.00027996724,0.00048951077,0.00025417455,0.00009154085,0.00020524386],"domain_scores_gemma":[0.9990654,0.0000981895,0.00044249033,0.00032279477,0.00005475642,0.000016376649],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007750181,0.00015126605,0.00028827105,0.00011419655,0.00010513368,0.000011769021,0.00020284975,0.00009690535,0.000015453825],"category_scores_gemma":[0.00016146479,0.000073689145,0.00008022543,0.0002506889,0.0002772529,0.00005709093,0.000039498973,0.00019767783,0.0000019873912],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007318172,0.000099471785,0.0032357546,0.000035923036,0.000025828758,0.0000039464744,0.00046953696,0.0000031434056,0.9941818,0.000029760098,0.0001739609,0.0016676956],"study_design_scores_gemma":[0.0002898376,0.00006527559,0.17467774,0.000107616164,0.000069893285,0.00012926756,0.000079726604,0.000021707685,0.82433915,0.0000064477795,0.00014239034,0.00007095862],"about_ca_topic_score_codex":0.00006610277,"about_ca_topic_score_gemma":0.000014330096,"teacher_disagreement_score":0.17144199,"about_ca_system_score_codex":0.000032844597,"about_ca_system_score_gemma":0.000023637249,"threshold_uncertainty_score":0.30049562},"labels":[],"label_agreement":null},{"id":"W2025475739","doi":"10.1111/j.1574-6968.2005.00081.x","title":"Impact of amino acid changes in the signal peptide on the secretion of the Tat-dependent xylanase C from<i>Streptomyces lividans</i>","year":2006,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"RNA and protein synthesis mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":21,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institut National de la Recherche Scientifique","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Signal peptide; Secretion; Biochemistry; Biology; Peptide; Xylanase; Amino acid; Arginine; Peptide sequence; Site-directed mutagenesis; Molecular biology; Enzyme; Mutant; Gene","score_opus":0.007063111335373652,"score_gpt":0.2075623364946749,"score_spread":0.20049922515930124,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2025475739","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9963916,0.00028987505,0.00011133232,0.0024677392,0.00009225359,0.00032645257,0.000220013,0.0000035279809,0.00009721893],"genre_scores_gemma":[0.99799955,0.000025053481,0.000037285346,0.0015668449,0.0001532822,0.000034790366,0.0001313123,0.0000123344835,0.000039560422],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99869156,0.0005187767,0.00022859187,0.00025474717,0.00007501761,0.00023131419],"domain_scores_gemma":[0.99916005,0.00011107604,0.00023541316,0.00045718008,0.000023238183,0.000013051907],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00038701057,0.00017932296,0.00017831007,0.000035837962,0.00006622637,0.000009987335,0.00052001316,0.00015062057,0.00006488432],"category_scores_gemma":[0.00002886435,0.00008671951,0.00018115579,0.00007876399,0.00023011155,0.0000023525743,0.00007215142,0.00013234637,0.0000048682728],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008825566,0.000056133915,0.007381511,0.00000408421,0.00005444998,0.0000020332566,0.00012825674,0.00006980708,0.9892771,0.000022617563,0.0027072837,0.00020844248],"study_design_scores_gemma":[0.00023496128,0.00025557564,0.01859671,0.000030082329,0.000019985993,0.00001177919,0.000097982185,0.0000014832704,0.97996545,0.00006268694,0.0006222392,0.0001010595],"about_ca_topic_score_codex":0.00072070176,"about_ca_topic_score_gemma":0.0004984259,"teacher_disagreement_score":0.011215199,"about_ca_system_score_codex":0.00001719069,"about_ca_system_score_gemma":0.00002719437,"threshold_uncertainty_score":0.35363188},"labels":[],"label_agreement":null},{"id":"W2025501144","doi":"10.1111/j.1574-6968.2000.tb09245.x","title":"Partial characterization of a genomic island associated with the multidrug resistance region of<i>Salmonella enterica</i>Typhymurium DT104","year":2000,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Salmonella and Campylobacter epidemiology","field":"Agricultural and Biological Sciences","cited_by":135,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Canadian Science Centre for Human and Animal Health; Health Canada; Health Sciences Centre; Manitoba Health","funders":"","keywords":"Prophage; Salmonella enterica; Genomic island; Genetics; Biology; Integrase; Genome; Gene; Open reading frame; Direct repeat; Salmonella; Sequence analysis; Inverted repeat; Insertion sequence; Multiple drug resistance; Homology (biology); Whole genome sequencing; Escherichia coli; Drug resistance; Bacteriophage; Peptide sequence; Transposable element; Bacteria","score_opus":0.00951753566758628,"score_gpt":0.17659651327627443,"score_spread":0.16707897760868815,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2025501144","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9947245,0.000069140726,0.0000197295,0.0046295067,0.000090242,0.00022702494,0.00013759626,0.00002612298,0.00007615242],"genre_scores_gemma":[0.9972219,0.00006809567,0.000012303564,0.0017815756,0.000115644085,0.000013707357,0.00043656924,0.0000024888222,0.00034772226],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99853677,0.00042468432,0.00036013697,0.00031693527,0.000046039168,0.0003154529],"domain_scores_gemma":[0.9991644,0.0002680486,0.0003769453,0.000115191106,0.000042617037,0.00003276966],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00023197265,0.00017807452,0.00036890293,0.000012861118,0.000101740785,0.000007637644,0.00029840204,0.00014147094,0.00016374314],"category_scores_gemma":[0.000017175234,0.00006548847,0.00010692294,0.00018076203,0.00039632415,0.000043313117,0.000030241868,0.00013242502,0.000016125796],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00028928835,0.00005435325,0.020442747,0.0000034542493,0.000054026546,0.0000054856964,0.00018089186,0.000009328061,0.97677195,0.0000040153855,0.0013888133,0.00079565647],"study_design_scores_gemma":[0.00067805866,0.00033139452,0.9045092,0.000068021705,0.00006932788,0.00005602726,0.00006280826,0.000017483755,0.05958628,0.000011404724,0.034266435,0.00034355698],"about_ca_topic_score_codex":0.00008448152,"about_ca_topic_score_gemma":0.00023494044,"teacher_disagreement_score":0.91718566,"about_ca_system_score_codex":0.000021888733,"about_ca_system_score_gemma":0.000006307533,"threshold_uncertainty_score":0.26705423},"labels":[],"label_agreement":null},{"id":"W2025762507","doi":"10.1016/j.femsle.2005.02.031","title":"Disruption of a gene encoding glycerol 3-phosphatase from<i>Candida albicans</i>impairs intracellular glycerol accumulation-mediated salt-tolerance","year":2005,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Fungal and yeast genetics research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":33,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Biotechnology Research Institute; Hôpital Maisonneuve-Rosemont","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Glycerol; Biology; Candida albicans; Phosphatase; Biochemistry; Gene expression; Gene; Osmoregulation; Microbiology; Phosphorylation; Salinity","score_opus":0.01132363260843227,"score_gpt":0.25373356456570667,"score_spread":0.2424099319572744,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2025762507","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99158233,0.002559813,0.0033549927,0.0011112888,0.0002379069,0.00033425097,0.0007598039,0.000023811383,0.000035785688],"genre_scores_gemma":[0.9912617,0.0002501649,0.0023322573,0.00166795,0.0005537619,0.000033797332,0.0037839334,0.00003906744,0.00007733223],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9980794,0.00015153679,0.0005027128,0.000613248,0.00011677041,0.0005363106],"domain_scores_gemma":[0.99899364,0.00006203606,0.00021565975,0.00049230014,0.00009469396,0.00014169326],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00020690008,0.00028756566,0.00032622964,0.00009871465,0.000110589914,0.000022045591,0.00040036105,0.00029856764,0.00019737742],"category_scores_gemma":[0.00006801689,0.00027964317,0.00014777806,0.00016706911,0.00029245653,0.000012392956,0.00012983072,0.00023938836,0.000093492956],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0004509335,0.00009123192,0.007344882,0.00001419325,0.00011769381,0.000009109912,0.00012630946,0.002813021,0.9851158,0.0000034671114,0.0024006206,0.0015127248],"study_design_scores_gemma":[0.0014573045,0.00018952391,0.0020689834,0.000022962391,0.000027909793,0.00002279172,0.00002511171,0.0009086947,0.96892583,0.000003982935,0.026040444,0.0003064386],"about_ca_topic_score_codex":0.00019764887,"about_ca_topic_score_gemma":0.00011864676,"teacher_disagreement_score":0.023639824,"about_ca_system_score_codex":0.000050947587,"about_ca_system_score_gemma":0.000071981936,"threshold_uncertainty_score":0.99996555},"labels":[],"label_agreement":null},{"id":"W2026342287","doi":"10.1111/j.1574-6968.2002.tb11357.x","title":"Impact of feed processing and mixed ruminal culture on the fate of recombinant EPSP synthase and endogenous canola plant DNA","year":2002,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Genetically Modified Organisms Research","field":"Agricultural and Biological Sciences","cited_by":31,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta; Agriculture Food and Rural Development; Agriculture and Agri-Food Canada","funders":"Natural Sciences and Engineering Research Council of Canada; Canadian Food Inspection Agency","keywords":"Canola; Recombinant DNA; Endogeny; Biology; Rumen; DNA; Biochemistry; Genetically modified organism; DNA shuffling; Gene; Food science; Fermentation","score_opus":0.03733960454135291,"score_gpt":0.22029297903713055,"score_spread":0.18295337449577764,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2026342287","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9967156,0.00036969603,7.258415e-7,0.0024964875,0.00003782502,0.00021690094,0.000120288336,0.000009045442,0.000033424105],"genre_scores_gemma":[0.9995905,0.00009951831,0.000031688065,0.0001938486,0.00002261974,0.000005096756,0.00002600992,0.0000015817524,0.000029103418],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9990093,0.00015393498,0.00019452098,0.00026025984,0.000060522576,0.00032143077],"domain_scores_gemma":[0.99955314,0.000176809,0.00010694238,0.00006509118,0.000033718625,0.00006431263],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00016541392,0.00015187035,0.00023195412,0.000019507883,0.00014839652,0.00002136583,0.00019730281,0.00011146879,0.00009954936],"category_scores_gemma":[0.000047273625,0.00004826855,0.000056844092,0.00012322285,0.00043919217,0.000021111186,0.00008136067,0.00017258692,0.000004574261],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000051187963,0.000069666276,0.003371555,0.0000105545,0.000028505485,0.000009584643,0.00032907733,0.0000011861389,0.9871294,0.0000059038994,0.0008425541,0.008150805],"study_design_scores_gemma":[0.0005298914,0.0020344951,0.18177125,0.00009603214,0.000032162712,0.00048913044,0.00037568735,0.00004028175,0.8138687,0.000028174418,0.0004465442,0.00028767754],"about_ca_topic_score_codex":0.00026550682,"about_ca_topic_score_gemma":0.00005888935,"teacher_disagreement_score":0.1783997,"about_ca_system_score_codex":0.00001966321,"about_ca_system_score_gemma":0.0000061378337,"threshold_uncertainty_score":0.19683343},"labels":[],"label_agreement":null},{"id":"W2026527014","doi":"10.1111/j.1574-6968.2002.tb11129.x","title":"LC-MS analysis of pig intestine sulfatides: Interaction with<i>Escherichia coli</i>STb enterotoxin and characterization of molecular species present","year":2002,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Escherichia coli research studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":17,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institut National de la Recherche Scientifique; Université de Montréal","funders":"","keywords":"Enterotoxin; Chemistry; Escherichia coli; Enterotoxigenic Escherichia coli; Biochemistry; Monoclonal antibody; Fatty acid; Residue (chemistry); Chromatography; Electrospray ionization; Epitope; Mass spectrometry; Antibody; Biology","score_opus":0.011518649986939428,"score_gpt":0.2263205701338651,"score_spread":0.21480192014692567,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2026527014","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9964139,0.00022283704,0.0020021019,0.0008056923,0.00004907412,0.00032238636,0.0000841483,0.000008885898,0.00009097432],"genre_scores_gemma":[0.9981422,0.0002539827,0.00056490203,0.00045174314,0.000041230614,0.00004310405,0.00035654736,0.00001704113,0.00012923843],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9988476,0.00016016478,0.00033203638,0.0003555132,0.000071145754,0.00023355515],"domain_scores_gemma":[0.9992311,0.000036702426,0.0002687423,0.0002801625,0.00013965086,0.000043626787],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012184021,0.0001934011,0.00037851767,0.00019495927,0.00004080817,0.000011665982,0.00015873094,0.00009137358,0.000047773632],"category_scores_gemma":[0.00006828667,0.00016804664,0.00010068115,0.00037528135,0.00043342516,0.000009455101,0.00015573515,0.00011987745,0.0000013597592],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014277005,0.000095669144,0.028932717,0.00003958757,0.0011977047,0.0000037531624,0.00018352625,0.00008608024,0.96889687,0.000005127084,0.00031103115,0.000105192565],"study_design_scores_gemma":[0.0005012359,0.0004351732,0.04586298,0.000036358553,0.00022439452,0.00000874798,0.000068906455,0.00028805874,0.94907576,4.7408324e-7,0.0033223655,0.00017553961],"about_ca_topic_score_codex":0.00004563769,"about_ca_topic_score_gemma":0.000043044292,"teacher_disagreement_score":0.019821076,"about_ca_system_score_codex":0.000017715605,"about_ca_system_score_gemma":0.000009811927,"threshold_uncertainty_score":0.6852743},"labels":[],"label_agreement":null},{"id":"W2026935866","doi":"10.1111/j.1574-6968.2008.01343.x","title":"Linkage of microbial ecology to phenotype: correlation of rumen microbial ecology to cattle's feed efficiency","year":2008,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Ruminant Nutrition and Digestive Physiology","field":"Agricultural and Biological Sciences","cited_by":319,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Agriculture Food and Rural Development; University of Alberta","funders":"","keywords":"Rumen; Temperature gradient gel electrophoresis; Biology; Microbial ecology; Host (biology); Microbiome; Bacteria; Fermentation; Food science; Animal science; Ecology; Genetics; 16S ribosomal RNA","score_opus":0.011121442879601852,"score_gpt":0.2028223350668639,"score_spread":0.19170089218726205,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2026935866","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98695487,0.0000314233,0.000062277926,0.010946705,0.00086247205,0.0006356736,0.00037724763,0.00004364743,0.00008565951],"genre_scores_gemma":[0.9932024,0.000014149379,0.00051784894,0.0054537863,0.00021822195,0.000024022533,0.00042519404,0.000004082349,0.00014033364],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9977942,0.00029056205,0.00064400944,0.0005981752,0.00005580314,0.0006172294],"domain_scores_gemma":[0.99887544,0.00038026826,0.0003002614,0.00013867505,0.00016493135,0.00014045321],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00020312861,0.00028167988,0.0006667525,0.00012568725,0.00020405055,0.0000052385103,0.00048830954,0.0003557429,0.00032657594],"category_scores_gemma":[0.000116826974,0.0001592179,0.00018367133,0.00052231055,0.0005486837,0.000051156923,0.00020310331,0.00021067294,0.00032422715],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00029418364,0.00030626627,0.0170258,0.000009868579,0.000028961345,0.0000074772447,0.00024885833,0.0001283105,0.9640626,0.00006378788,0.017466191,0.00035771658],"study_design_scores_gemma":[0.0010355889,0.0022249578,0.6832112,0.000035351066,0.000034370743,0.00015433731,0.00008691752,0.000004449348,0.29405552,0.000026080888,0.018640347,0.00049088005],"about_ca_topic_score_codex":0.0001743331,"about_ca_topic_score_gemma":0.00040896723,"teacher_disagreement_score":0.67000705,"about_ca_system_score_codex":0.000071057744,"about_ca_system_score_gemma":0.000034898247,"threshold_uncertainty_score":0.6492718},"labels":[],"label_agreement":null},{"id":"W2028114326","doi":"10.1111/j.1574-6968.2007.00830.x","title":"The Outer membrane protein OmpA of<i>Mannheimia haemolytica</i>A1 is involved in the binding of fibronectin","year":2007,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Vibrio bacteria research studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":23,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Fibronectin; Bacterial outer membrane; Fibronectins; Biology; Binding protein; Binding site; Molecular biology; Trypsin; Chemistry; Biochemistry; Enzyme; Extracellular matrix; Gene; Escherichia coli","score_opus":0.01344866555568843,"score_gpt":0.2572498668906611,"score_spread":0.24380120133497266,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2028114326","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9937482,0.00035598004,0.000087591616,0.005069422,0.00010744483,0.00049900264,0.000034039444,0.0000045570505,0.00009375886],"genre_scores_gemma":[0.99830455,0.00005121113,0.00026407317,0.0010737693,0.00009141091,0.000025448162,0.00005611344,0.000015571084,0.000117848984],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99852896,0.00020903576,0.00039948564,0.0002955579,0.00007839532,0.0004885599],"domain_scores_gemma":[0.99914986,0.00013266329,0.00017280146,0.00046145837,0.0000571686,0.000026019563],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010953193,0.00017553511,0.00024387937,0.00007768832,0.00011060665,0.000015239205,0.0005326441,0.00014456746,0.000007145498],"category_scores_gemma":[0.00014661337,0.00010719243,0.00011894374,0.0001639584,0.0006545721,0.000004077885,0.00022660245,0.00020780231,0.0000074963514],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002098511,0.000032566397,0.003149801,0.000026155003,0.000114365735,0.000008034307,0.00039194964,0.0000020703744,0.9912378,0.00001485236,0.0046171565,0.00019536288],"study_design_scores_gemma":[0.00054612703,0.00016131318,0.0037249394,0.000033625776,0.0000101177775,0.000017018381,0.00035461425,0.0000011348511,0.97900265,0.00000548827,0.016021417,0.00012153282],"about_ca_topic_score_codex":0.00007408572,"about_ca_topic_score_gemma":0.00021592891,"teacher_disagreement_score":0.012235165,"about_ca_system_score_codex":0.000020307236,"about_ca_system_score_gemma":0.000035000456,"threshold_uncertainty_score":0.43711802},"labels":[],"label_agreement":null},{"id":"W2028667410","doi":"10.1111/j.1574-6968.2009.01551.x","title":"Immunization with SsEno fails to protect mice against challenge with<i>Streptococcus suis</i>serotype 2","year":2009,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Streptococcal Infections and Treatments","field":"Medicine","cited_by":35,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Streptococcus suis; Microbiology; Immunization; Virology; Antibody; Biology; Serotype; Vaccination; Bacterial adhesin; Titer; Immunoglobulin G; Virulence; Immunology","score_opus":0.00833168411492483,"score_gpt":0.23381181073867197,"score_spread":0.22548012662374714,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2028667410","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98460084,0.00007085887,0.00079840375,0.010911693,0.00007957527,0.0023691829,0.000014801009,0.00017018152,0.0009844782],"genre_scores_gemma":[0.99098724,0.000013216714,0.0016484852,0.006554346,0.00010723018,0.00020881425,0.00025251208,0.000033051685,0.00019509072],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99875385,0.000058395242,0.00022214027,0.0004729784,0.000058413087,0.00043420497],"domain_scores_gemma":[0.9992121,0.000027477727,0.00010162323,0.0004221812,0.00010615964,0.00013045839],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000062214815,0.0003023622,0.00036053985,0.00018448352,0.00015041801,0.000027795544,0.000099638884,0.00013838112,0.00007262551],"category_scores_gemma":[0.000014904935,0.00020997648,0.000064433094,0.0003722158,0.000107743406,0.000089828296,0.000021832315,0.0002513187,0.00019644682],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005366075,0.0003684064,0.04763029,0.000016438664,0.00027672332,0.00015310467,0.00022367794,0.000100502795,0.944912,0.000017836323,0.0014316618,0.0043327245],"study_design_scores_gemma":[0.017377568,0.021018226,0.47679958,0.0012352128,0.00068278704,0.0014305037,0.0003818645,0.000017983759,0.42923012,0.000021845177,0.049938224,0.001866073],"about_ca_topic_score_codex":0.000062149426,"about_ca_topic_score_gemma":0.00005078773,"teacher_disagreement_score":0.5156819,"about_ca_system_score_codex":0.00013266773,"about_ca_system_score_gemma":0.000051169587,"threshold_uncertainty_score":0.8562593},"labels":[],"label_agreement":null},{"id":"W2029536289","doi":"10.1111/j.1574-6968.2007.00734.x","title":"The O<sub>2</sub>-responsive repressor PpsR2 but not PpsR1 transduces a light signal sensed by the BphP1 phytochrome in<i>Rhodopseudomonas palustris</i>CGA009","year":2007,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Light effects on plants","field":"Agricultural and Biological Sciences","cited_by":20,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"Boehringer Ingelheim Fonds; U.S. Department of Energy","keywords":"Repressor; Complementation; Rhodopseudomonas palustris; Phytochrome; Lac repressor; Transcription (linguistics); Psychological repression; Biology; Gene; Photosynthesis; Biophysics; Chemistry; Biochemistry; Transcription factor; Gene expression; Genetics; Mutant; Botany; Bacteria; Red light","score_opus":0.007353557825973703,"score_gpt":0.1923382402237032,"score_spread":0.18498468239772947,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2029536289","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.96529484,0.0005683141,0.000011069746,0.032238867,0.00048527512,0.0009086739,0.00032448902,0.00009807381,0.00007040401],"genre_scores_gemma":[0.9880093,0.000077056444,0.000014015114,0.0111080725,0.00042475908,0.000056924615,0.00015885133,0.000006312954,0.00014472012],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99623215,0.00090698386,0.0006287505,0.00082941324,0.00019394276,0.0012087593],"domain_scores_gemma":[0.99513537,0.0041191354,0.00029160807,0.00025294014,0.000067368805,0.00013356317],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001827059,0.00046778147,0.00047086866,0.000041169613,0.00067770097,0.000117531985,0.0009692381,0.0003735952,0.0000426602],"category_scores_gemma":[0.00013153987,0.00015444098,0.00024381698,0.0005057608,0.00059882994,0.000121441284,0.00012014326,0.0006800437,0.00015513085],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00062597496,0.00006378127,0.00046566583,0.000004023613,0.00006963767,0.00012479012,0.00023855054,0.0000041589765,0.9616837,0.0000051825978,0.029861117,0.006853404],"study_design_scores_gemma":[0.0005731389,0.00020677707,0.018578652,0.000034198387,0.000026988713,0.00024336537,0.0002407138,0.0000046652026,0.9537991,0.000016227666,0.025881344,0.00039478703],"about_ca_topic_score_codex":0.00021633286,"about_ca_topic_score_gemma":0.0009046269,"teacher_disagreement_score":0.022714457,"about_ca_system_score_codex":0.000086294174,"about_ca_system_score_gemma":0.000020234771,"threshold_uncertainty_score":0.629792},"labels":[],"label_agreement":null},{"id":"W2029628361","doi":"10.1111/1574-6968.12223","title":"The anticancer drug tirapazamine has antimicrobial activity against<i>Escherichia coli</i>,<i>Staphylococcus aureus</i>and<i>Clostridium difficile</i>","year":2013,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Clostridium difficile and Clostridium perfringens research","field":"Medicine","cited_by":22,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University Health Centre; McGill University","funders":"Canadian Institutes of Health Research","keywords":"Microbiology; Staphylococcus aureus; Tirapazamine; Antimicrobial; Escherichia coli; Clostridium difficile; Chemistry; Antibiotics; Bacteria; Biology; In vitro; Biochemistry; Cytotoxicity","score_opus":0.012863557197957988,"score_gpt":0.23536207893370045,"score_spread":0.22249852173574247,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2029628361","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.92235166,0.00081729656,0.000030946856,0.07384757,0.0006936374,0.00163421,0.00012342945,0.00017170816,0.0003295577],"genre_scores_gemma":[0.98492986,0.0010202564,0.0001380257,0.01182916,0.0007300925,0.00016103957,0.00013352424,0.00009621841,0.0009618243],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99628675,0.00029950697,0.0006183249,0.0009919426,0.00025902488,0.0015444304],"domain_scores_gemma":[0.9976395,0.00052820146,0.0002377038,0.0009667731,0.00023295578,0.00039487565],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00044244822,0.000657633,0.0008334643,0.00018982346,0.0009168604,0.00026168817,0.0005137854,0.00032170265,0.00015463268],"category_scores_gemma":[0.00016164932,0.00047619213,0.0003249818,0.0005342921,0.0019630645,0.00015069233,0.00039503133,0.0012954181,0.0004302836],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00030777065,0.00022174872,0.0013006504,0.00005722379,0.0002237118,0.00004742827,0.00013638944,0.0000067710052,0.8129428,0.0000060542457,0.18240969,0.0023397487],"study_design_scores_gemma":[0.0027757932,0.00020166268,0.0044076447,0.00009221414,0.00011962797,0.00007163292,0.0000805783,0.00012321326,0.8954575,0.0000034904426,0.0960906,0.00057603914],"about_ca_topic_score_codex":0.0005420052,"about_ca_topic_score_gemma":0.00006899989,"teacher_disagreement_score":0.08631908,"about_ca_system_score_codex":0.00025874106,"about_ca_system_score_gemma":0.00029997548,"threshold_uncertainty_score":0.999769},"labels":[],"label_agreement":null},{"id":"W2029785407","doi":"10.1111/j.1574-6968.2007.00756.x","title":"Development of species-specific primers for detection of<i>Streptococcus mutans</i>in mixed bacterial samples","year":2007,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Oral microbiology and periodontitis research","field":"Dentistry","cited_by":77,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institute of Dental and Craniofacial Research; National Institutes of Health; York University","keywords":"Streptococcus mutans; Streptococcus sobrinus; Primer (cosmetics); Microbiology; Streptococcus sanguinis; Saliva; Biology; Polymerase chain reaction; Bacteria; Chemistry; Gene; Genetics; Biochemistry","score_opus":0.03368790538494054,"score_gpt":0.275860833105829,"score_spread":0.24217292772088844,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2029785407","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9902293,0.00012382632,0.006878445,0.00005421065,0.0017192049,0.0006237284,0.00030617544,0.000021601254,0.00004351918],"genre_scores_gemma":[0.98831695,0.000008665089,0.010847604,0.000062553,0.0001505303,0.000028017497,0.00045791938,0.000022975031,0.00010479894],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.998041,0.00012267345,0.0008098685,0.0004124709,0.00004848619,0.0005655157],"domain_scores_gemma":[0.999087,0.0002616946,0.00025791524,0.00024919305,0.00009940463,0.000044819637],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000825255,0.00020982735,0.00047472946,0.00032026594,0.000094768504,0.000010062463,0.00029772584,0.0003180034,0.00030198984],"category_scores_gemma":[0.000058621205,0.00020837017,0.00014241706,0.00026155444,0.000460408,0.00005598945,0.00007994505,0.0002272628,0.000042346775],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0008005425,0.000077074685,0.009981782,0.00005269682,0.00008360593,0.000013432018,0.00031459698,0.0000022095098,0.9818107,0.000023658786,0.00090373954,0.005936002],"study_design_scores_gemma":[0.0011592493,0.00006482913,0.12802331,0.000027027967,0.0000059333975,0.000031143005,0.00012529088,1.8908949e-7,0.7735773,0.0000025714462,0.09682637,0.00015683733],"about_ca_topic_score_codex":0.000050110062,"about_ca_topic_score_gemma":0.0015598957,"teacher_disagreement_score":0.20823342,"about_ca_system_score_codex":0.000129427,"about_ca_system_score_gemma":0.00007143204,"threshold_uncertainty_score":0.8497089},"labels":[],"label_agreement":null},{"id":"W2029785496","doi":"10.1111/j.1574-6968.2007.00948.x","title":"Comparison of five rep-PCR genomic fingerprinting methods for differentiation ofâ fecal<i>Escherichia coli</i>from humans, poultry and wild birds","year":2007,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Enterobacteriaceae and Cronobacter Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":118,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Agriculture and Agri-Food Canada; University of Victoria","funders":"Natural Sciences and Engineering Research Council of Canada; Canada Research Chairs; University of Victoria","keywords":"Feces; Biology; Escherichia coli; Escherichia; Microbiology; Polymerase chain reaction; Genetics; Gene","score_opus":0.01864379616546488,"score_gpt":0.3364484098375356,"score_spread":0.31780461367207075,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2029785496","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.95582217,0.00049143884,0.04278981,0.00024158356,0.00023505095,0.00031697517,0.00007400478,0.00001361252,0.000015383377],"genre_scores_gemma":[0.9802297,0.000043912187,0.017852765,0.00078697497,0.00019579397,0.000017901366,0.00077810616,0.000031269654,0.00006360164],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9985003,0.00016776526,0.00042363096,0.00048512983,0.00003008497,0.00039309295],"domain_scores_gemma":[0.99924254,0.00010992291,0.00023684812,0.00029579704,0.00005417991,0.000060697785],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00045783797,0.00020051323,0.00034201992,0.00007157866,0.000107072214,0.000024919871,0.00021744127,0.00024507078,0.000011295885],"category_scores_gemma":[0.00005633092,0.00019756108,0.000115379,0.000051058076,0.00018846008,0.000006046146,0.00018266623,0.00016783603,0.0000020918799],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00021889126,0.000053471696,0.14569746,0.000030073288,0.0001422261,4.0543026e-7,0.00022610434,0.000003865352,0.8511499,0.0000042811425,0.00064269686,0.0018306351],"study_design_scores_gemma":[0.0008461931,0.00019413696,0.11643054,0.000026130245,0.00004267175,0.0000030584213,0.00026016097,0.00002166893,0.8736385,0.00001034368,0.008309923,0.00021664762],"about_ca_topic_score_codex":0.00009054148,"about_ca_topic_score_gemma":0.00005644037,"teacher_disagreement_score":0.029266912,"about_ca_system_score_codex":0.000026418433,"about_ca_system_score_gemma":0.000020157433,"threshold_uncertainty_score":0.80563074},"labels":[],"label_agreement":null},{"id":"W2030996373","doi":"10.1111/j.1574-6968.2008.01351.x","title":"The involvement of the pyruvate dehydrogenase E1α subunit, in<i>Streptococcus mutans</i>acid tolerance","year":2008,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Enzyme Structure and Function","field":"Materials Science","cited_by":32,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Canadian Institutes of Health Research; Canada Research Chairs","keywords":"Streptococcus mutans; Pyruvate dehydrogenase complex; Biochemistry; Dehydrogenase; Citric acid cycle; Bacteria; Pyruvic acid; Enzyme; Chemistry; Pyruvate dehydrogenase kinase; Metabolism; Biology; Microbiology","score_opus":0.008516088464242106,"score_gpt":0.18859522417843566,"score_spread":0.18007913571419357,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2030996373","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9961704,0.00041734584,0.000045641464,0.0016570649,0.0012592954,0.00030459045,0.000035216406,0.000025555924,0.00008488921],"genre_scores_gemma":[0.9959533,0.000046544137,0.00007400164,0.003702356,0.00009538049,0.000033522003,0.000013822278,0.00001135206,0.00006970221],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99874395,0.00018624307,0.0003527307,0.0002789015,0.000070060865,0.0003680831],"domain_scores_gemma":[0.99919915,0.00007289418,0.00018800977,0.00046926463,0.000043266115,0.000027424448],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002627481,0.0001637235,0.0001925198,0.0000401008,0.00031176244,0.000011421506,0.00046231982,0.00008792535,0.00006550249],"category_scores_gemma":[0.000029976496,0.0000933335,0.00008009337,0.00024664824,0.00072504644,0.000061996776,0.00009942039,0.00019027725,0.000039336235],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00003618649,0.000014972197,0.0103992615,0.0000068354557,0.000008703897,0.000008969253,0.00045208517,0.00013075993,0.9838565,0.000039171162,0.004997244,0.000049319136],"study_design_scores_gemma":[0.0004121165,0.000031784908,0.006553603,0.000022879822,0.000007345619,0.00003875112,0.000048279322,0.0000058687874,0.9820848,0.00003943065,0.010640232,0.00011490062],"about_ca_topic_score_codex":0.00016230134,"about_ca_topic_score_gemma":0.00057814794,"teacher_disagreement_score":0.005642988,"about_ca_system_score_codex":0.000054262808,"about_ca_system_score_gemma":0.000046939927,"threshold_uncertainty_score":0.380603},"labels":[],"label_agreement":null},{"id":"W2031924069","doi":"10.1016/j.femsle.2005.08.044","title":"Acquisition of plasmin activity and induction of arachidonic acid release by<i>Streptococcus suis</i>in contact with human brain microvascular endothelial cells","year":2005,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Streptococcal Infections and Treatments","field":"Medicine","cited_by":23,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; University of Saskatchewan; Natural Sciences and Engineering Research Council of Canada; Université Laval","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Streptococcus suis; Zymography; Plasmin; Phospholipase A2; Microbiology; Biology; Hemolysin; Arachidonic acid; Phospholipase; Urokinase receptor; Interleukin 8; Inflammation; Immunology; Receptor; Biochemistry; Enzyme; Virulence","score_opus":0.0059966359423844874,"score_gpt":0.22913598450749315,"score_spread":0.22313934856510867,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2031924069","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9981043,0.00011025759,0.00007234226,0.00083255215,0.00005229316,0.0006638195,0.000118903066,0.000018399654,0.000027180973],"genre_scores_gemma":[0.999187,0.000014727065,0.000162764,0.00035356928,0.000052988682,0.00003811901,0.00013444728,0.000016809998,0.00003955825],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99902266,0.00010429716,0.00027568414,0.00032692493,0.000044285687,0.00022616197],"domain_scores_gemma":[0.99943554,0.00005546794,0.00020164804,0.00022211844,0.000031621967,0.00005359086],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00010708788,0.00019177022,0.00041506524,0.00017733398,0.00004740759,0.00000447971,0.000041658397,0.00014851082,0.00005761663],"category_scores_gemma":[0.0000075809835,0.00015995784,0.000095600946,0.00012173224,0.0002288633,0.000080794125,0.000019606208,0.00020437434,0.0000057898355],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003124628,0.0004425445,0.0848693,0.000035357723,0.0002142399,0.000012494545,0.000087671455,0.000010106369,0.91256267,0.0000046863297,0.00047833874,0.00097013405],"study_design_scores_gemma":[0.004911848,0.0006923441,0.09739337,0.000091127426,0.00011223103,0.00009147082,0.000021062135,0.0000039240476,0.8961304,0.0000013854917,0.00043682932,0.000114018134],"about_ca_topic_score_codex":0.00049512484,"about_ca_topic_score_gemma":0.00011897675,"teacher_disagreement_score":0.016432274,"about_ca_system_score_codex":0.00009885138,"about_ca_system_score_gemma":0.0000279858,"threshold_uncertainty_score":0.6522891},"labels":[],"label_agreement":null},{"id":"W2032028496","doi":"10.1016/s0378-1097(03)00168-x","title":"Isolation and characterisation of<i>Nocardioides</i>sp. SP12, an atrazine-degrading bacterial strain possessing the gene<i>trzN</i>from bulk- and maize rhizosphere soil","year":2003,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Pesticide and Herbicide Environmental Studies","field":"Environmental Science","cited_by":102,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Agriculture and Agri-Food Canada","funders":"Institut National de la Recherche Agronomique","keywords":"Atrazine; Rhizosphere; Microbiology; Biology; Cyanuric acid; 16S ribosomal RNA; Bacteria; Chemistry; Stereochemistry; Organic chemistry; Genetics","score_opus":0.008096592843895507,"score_gpt":0.19281481774380965,"score_spread":0.18471822489991416,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2032028496","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99773026,0.00023094426,0.0006160514,0.0008295175,0.00020809157,0.00017891401,0.00008705184,0.000019026425,0.000100163146],"genre_scores_gemma":[0.9962279,0.00009710891,0.0021635462,0.0012646175,0.000095189804,0.000008247682,0.000114640156,0.000018120116,0.000010610786],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99880743,0.00018679573,0.00026822044,0.0003973495,0.00006251965,0.000277661],"domain_scores_gemma":[0.99950546,0.00008940622,0.00016245262,0.0001854574,0.0000022645838,0.000054930326],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002503742,0.00021007091,0.00024758262,0.000015591884,0.0002843773,0.000044729866,0.000107844506,0.00009990167,0.0003538684],"category_scores_gemma":[0.000016554297,0.00016851873,0.000043633634,0.000061260456,0.0006262354,0.00024832328,0.00009363783,0.000136343,0.00001825188],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000021007094,0.000014353748,0.11614017,0.0000028657673,0.000031711905,0.0000034055824,0.00056537514,0.00007157586,0.8816987,0.0000072301264,0.00013596608,0.0013076329],"study_design_scores_gemma":[0.00064221874,0.00009549221,0.9218878,0.00002076431,0.00008251365,0.000097432996,0.00024348161,0.00004827697,0.074020274,0.00022747224,0.0023111168,0.00032314565],"about_ca_topic_score_codex":0.00048727283,"about_ca_topic_score_gemma":0.00016477398,"teacher_disagreement_score":0.8076784,"about_ca_system_score_codex":0.000070615315,"about_ca_system_score_gemma":0.0000044293606,"threshold_uncertainty_score":0.6871995},"labels":[],"label_agreement":null},{"id":"W2032985706","doi":"10.1111/j.1574-6968.2000.tb09002.x","title":"A second<i>tonB</i>gene in<i>Pseudomonas aeruginosa</i>is linked to the<i>exbB</i>and<i>exbD</i>genes","year":2000,"lang":"he","type":"article","venue":"FEMS Microbiology Letters","topic":"Bacterial Genetics and Biotechnology","field":"Biochemistry, Genetics and Molecular Biology","cited_by":79,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Queen's University","funders":"Medical Research Council; Cystic Fibrosis Foundation","keywords":"Biology; Complementation; Hemin; Gene; Escherichia coli; Mutant; Pseudomonas aeruginosa; Microbiology; Molecular biology; Genetics; Heme; Bacteria; Biochemistry","score_opus":0.005016798273792323,"score_gpt":0.19681337704976834,"score_spread":0.19179657877597603,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2032985706","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.91424406,0.007798145,0.00003300554,0.07432379,0.0013947244,0.0010241542,0.0008398894,0.000043175176,0.000299057],"genre_scores_gemma":[0.92433846,0.005493627,0.00079643825,0.063942246,0.0012655355,0.00011140688,0.00059509627,0.00011480564,0.0033423842],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9950444,0.00040140506,0.0009853625,0.0018443116,0.000130496,0.0015940286],"domain_scores_gemma":[0.99789613,0.000056942605,0.00022626897,0.0014195385,0.00011601839,0.00028506856],"candidate_categories":["metaepi_narrow","research_integrity","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00062244677,0.000930846,0.0008623902,0.00023380209,0.0003244751,0.00013165928,0.0012369825,0.0015949978,0.001191181],"category_scores_gemma":[0.00004263449,0.00080068794,0.00030803296,0.00049263303,0.0012342101,0.000010213855,0.00066634873,0.0007911342,0.00076407345],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003772386,0.00012013018,0.00089836615,0.000032168926,0.00022536589,0.000047906895,0.00046116923,0.000039104172,0.9373539,0.000013217935,0.041727778,0.018703645],"study_design_scores_gemma":[0.0011675166,0.00038847903,0.0016817693,0.000036841444,0.000058385587,0.00031528974,0.000054272048,0.000006693469,0.3567517,0.000012401925,0.63882154,0.00070507644],"about_ca_topic_score_codex":0.00027149814,"about_ca_topic_score_gemma":0.0012544685,"teacher_disagreement_score":0.59709376,"about_ca_system_score_codex":0.00006693277,"about_ca_system_score_gemma":0.00015563352,"threshold_uncertainty_score":0.9997219},"labels":[],"label_agreement":null},{"id":"W2033531618","doi":"10.1016/j.femsle.2004.10.039","title":"Characterization of pRAS1-like plasmids from atypical North American psychrophilic<i>Aeromonas salmonicida</i>","year":2004,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Microbial Community Ecology and Physiology","field":"Environmental Science","cited_by":46,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Government of Newfoundland and Labrador; University of Prince Edward Island","funders":"","keywords":"Psychrophile; Aeromonas salmonicida; Plasmid; Microbiology; Aeromonas; Vibrionaceae; Biology; Bacteria; Genetics; Gene","score_opus":0.005689356216866023,"score_gpt":0.19462630337759268,"score_spread":0.18893694716072665,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2033531618","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9967973,0.000005897682,0.00024382315,0.0020430076,0.00038006285,0.00021101123,0.00020361043,0.000047806454,0.000067438436],"genre_scores_gemma":[0.9892603,0.000021403688,0.00070247345,0.008397367,0.00006551328,0.000011566532,0.0015058507,0.000020244817,0.000015284939],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99852014,0.0002547567,0.0003586228,0.00041830758,0.00004277204,0.00040541939],"domain_scores_gemma":[0.99911016,0.00008568823,0.00027724993,0.00044788932,0.00000875682,0.00007022535],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.000085147585,0.00023269188,0.00039598809,0.000047501446,0.00015939085,0.0000055383925,0.00051549624,0.00014870771,0.0010854398],"category_scores_gemma":[0.000012102638,0.00022749085,0.000095749165,0.00026900286,0.0016069432,0.000092225506,0.0002732515,0.00038969843,0.00067572074],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00018041239,0.00015724354,0.061375868,0.0000022847905,0.00004345504,0.000006134382,0.0003980208,0.00030405022,0.9359781,0.000010144313,0.001297126,0.00024717217],"study_design_scores_gemma":[0.0008389345,0.0003565956,0.89734244,0.0000101031055,0.000030836774,0.000034995686,0.000019517489,0.0000035628518,0.08819094,0.00008100478,0.012737068,0.000354014],"about_ca_topic_score_codex":0.0015112202,"about_ca_topic_score_gemma":0.0051316503,"teacher_disagreement_score":0.84778714,"about_ca_system_score_codex":0.000148043,"about_ca_system_score_gemma":0.000018260373,"threshold_uncertainty_score":0.9998277},"labels":[],"label_agreement":null},{"id":"W2034034784","doi":"10.1111/j.1574-6968.2002.tb11078.x","title":"Oral colonization and immune responses to<i>Streptococcus gordonii</i>expressing a pertussis toxin S1 fragment in mice","year":2002,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":36,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Izaak Walton Killam Health Centre; Dalhousie University","funders":"Medical Research Council; IWK Health Centre","keywords":"Streptococcus gordonii; Immunogenicity; Biology; Microbiology; Antibody; Recombinant DNA; Pertussis toxin; Fusion protein; Virology; Immunoglobulin A; Immune system; Saliva; Colonization; Immunoglobulin G; Immunology; Receptor; Streptococcaceae; Gene; G protein","score_opus":0.013817842398338536,"score_gpt":0.22926384946883183,"score_spread":0.2154460070704933,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2034034784","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9907603,0.001263528,0.00009670438,0.006297503,0.0009473745,0.0004389016,0.00006327125,0.00007673716,0.000055672503],"genre_scores_gemma":[0.99628997,0.00007574403,0.00024864424,0.0023026452,0.000049274375,0.000084634186,0.0001464448,0.00002344741,0.0007791843],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99820936,0.0004023721,0.00041992156,0.0004707255,0.000008065831,0.0004895599],"domain_scores_gemma":[0.9994289,0.00015891445,0.00011734759,0.0002290031,0.000034867073,0.00003091181],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00018805313,0.00025800127,0.00038654695,0.00030623475,0.00024191533,0.000041433963,0.00015887393,0.0003049591,0.0009093761],"category_scores_gemma":[0.000086560845,0.00023780536,0.000063734675,0.00025498756,0.00017838826,0.00011287467,0.00013895579,0.00027588214,0.00046246513],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00017410697,0.00011574614,0.015312033,0.0000076304,0.00006290681,0.000005495012,0.0007392017,0.000012133054,0.9705831,0.000014159886,0.010947947,0.0020255463],"study_design_scores_gemma":[0.004598777,0.00055979454,0.084942296,0.00018959618,0.000073434196,0.00048058468,0.00029204783,0.000017752642,0.68435526,0.000010460015,0.22358826,0.00089170685],"about_ca_topic_score_codex":0.0003446591,"about_ca_topic_score_gemma":0.00014530083,"teacher_disagreement_score":0.2862278,"about_ca_system_score_codex":0.0000865137,"about_ca_system_score_gemma":0.0000124792805,"threshold_uncertainty_score":0.99570304},"labels":[],"label_agreement":null},{"id":"W2034133670","doi":"10.1111/j.1574-6968.2007.00979.x","title":"Genetic elements for selection, deletion mutagenesis and complementation in<i>Francisella</i>spp.","year":2007,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Bacillus and Francisella bacterial research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":24,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Victoria","funders":"National Institute of Allergy and Infectious Diseases","keywords":"Francisella; Francisella tularensis; Complementation; Tularemia; Plasmid; Mutagenesis; Biology; Genetics; Pathogen; Selection (genetic algorithm); Mutant; Gene; Virology; Virulence","score_opus":0.009960649739828013,"score_gpt":0.26406016820461514,"score_spread":0.2540995184647871,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2034133670","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.968074,0.00028034384,0.03062543,0.0002502304,0.00019879051,0.000494175,0.000044189364,0.000007912628,0.000024925672],"genre_scores_gemma":[0.9930122,0.00010673634,0.004723493,0.0013473094,0.0002446973,0.000045422537,0.00043699084,0.000021488113,0.00006168045],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9987906,0.000054790988,0.00030885974,0.00038075264,0.000037606227,0.00042738797],"domain_scores_gemma":[0.999662,0.000026626241,0.000075685995,0.00011222668,0.000068043555,0.000055431945],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00045611887,0.00014248003,0.00014081613,0.000101749996,0.00010681356,0.000016666667,0.00009520923,0.00013366737,0.00003222196],"category_scores_gemma":[0.0000284383,0.00014905786,0.00004620936,0.00010047979,0.00009717172,0.0000037724778,0.000042811625,0.00006365126,0.000007789098],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00023999433,0.000026288637,0.043872304,0.000016894592,0.000028436038,0.0000013918085,0.000031153875,0.000016984504,0.947762,0.000007991086,0.0019774404,0.006019085],"study_design_scores_gemma":[0.003752875,0.0005469739,0.20447114,0.000012713048,0.000025370602,0.00006791599,0.0000655622,0.000079062505,0.64587,0.00003335126,0.14462404,0.00045102363],"about_ca_topic_score_codex":0.00005109236,"about_ca_topic_score_gemma":0.0004902042,"teacher_disagreement_score":0.30189207,"about_ca_system_score_codex":0.000034278546,"about_ca_system_score_gemma":0.000019802854,"threshold_uncertainty_score":0.6078403},"labels":[],"label_agreement":null},{"id":"W2034451821","doi":"10.1111/j.1574-6968.2001.tb10885.x","title":"Studies on the resistance/reactivation of<i>Giardia muris</i>cysts and<i>Cryptosporidium parvum</i>oocysts exposed to medium-pressure ultraviolet radiation","year":2001,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Parasitic Infections and Diagnostics","field":"Immunology and Microbiology","cited_by":65,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"Multidisciplinary University Research Initiative","keywords":"Infectivity; Cryptosporidium parvum; Microbiology; Biology; In vivo; Giardia; Ex vivo; Apicomplexa; Cryptosporidium; Virology; Feces; Immunology; Protozoal disease; Virus","score_opus":0.015154362533042727,"score_gpt":0.2476759770269226,"score_spread":0.23252161449387987,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2034451821","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9870566,0.0018219305,0.00029284332,0.007820462,0.00200983,0.000553422,0.00013758853,0.00006300696,0.00024432648],"genre_scores_gemma":[0.99336433,0.00035352906,0.000072824885,0.0054978593,0.00013848765,0.00008823285,0.00019149527,0.000020520389,0.00027270152],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99825114,0.00038709538,0.0004708487,0.00043178527,0.000034322926,0.00042479526],"domain_scores_gemma":[0.997883,0.0012704311,0.00027620565,0.00041002434,0.00012692036,0.00003340057],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00050041365,0.00028778028,0.00044988934,0.00018384003,0.000319124,0.000012244201,0.00020466174,0.0002852996,0.00005321596],"category_scores_gemma":[0.0006203117,0.00021332083,0.00009587982,0.000249772,0.00045774144,0.00006858225,0.00005799497,0.00035054123,0.00016092006],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002625655,0.00007702929,0.006471124,0.000014175921,0.00034090655,0.00000828507,0.0011456101,0.000099265824,0.92657757,0.0006761366,0.06413995,0.00018738132],"study_design_scores_gemma":[0.0015994954,0.00025986473,0.034701362,0.00015010034,0.00019437868,0.00013822841,0.0006586521,7.0284193e-7,0.8161786,0.00010470611,0.14559661,0.00041729392],"about_ca_topic_score_codex":0.000028409091,"about_ca_topic_score_gemma":0.00003153753,"teacher_disagreement_score":0.11039896,"about_ca_system_score_codex":0.000059354945,"about_ca_system_score_gemma":0.000037096976,"threshold_uncertainty_score":0.86989707},"labels":[],"label_agreement":null},{"id":"W2034724021","doi":"10.1111/j.1574-6968.2000.tb09219.x","title":"<i>Pseudomonas aeruginosa</i>B-band lipopolysaccharide genes<i>wbpA</i>and<i>wbpI</i>and their<i>Escherichia coli</i>homologues<i>wecC</i>and<i>wecB</i>are not functionally interchangeable","year":2000,"lang":"he","type":"article","venue":"FEMS Microbiology Letters","topic":"Bacterial Genetics and Biotechnology","field":"Biochemistry, Genetics and Molecular Biology","cited_by":19,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph; Toronto General Hospital; University of Toronto","funders":"University of Guelph","keywords":"Escherichia coli; Pseudomonas aeruginosa; Microbiology; Lipopolysaccharide; Gene; Pseudomonas; Biology; Chemistry; Genetics; Bacteria; Immunology","score_opus":0.008118684926130213,"score_gpt":0.18948698605929273,"score_spread":0.18136830113316252,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2034724021","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9553017,0.020910427,0.00017429721,0.019502712,0.0016309677,0.00093743077,0.0012299289,0.00011345492,0.00019910545],"genre_scores_gemma":[0.93857545,0.02584222,0.0008734982,0.030353859,0.0014078112,0.00011886974,0.00078480045,0.0001938764,0.0018496001],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9937897,0.00056623603,0.001139105,0.0025832527,0.00013743536,0.0017843082],"domain_scores_gemma":[0.9975437,0.00014475777,0.00052699016,0.001121221,0.00016662876,0.0004967243],"candidate_categories":["metaepi_narrow","sts","research_integrity"],"consensus_categories":["metaepi_narrow"],"category_scores_codex":[0.00066089287,0.0015133306,0.0014526959,0.00026368006,0.00068040163,0.0002421698,0.00078944204,0.0022867536,0.00031775],"category_scores_gemma":[0.00005627614,0.0014043368,0.00033296229,0.00025869015,0.0035690588,0.000036659825,0.00085884635,0.0011681388,0.00013842696],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00096766336,0.00018798305,0.0016141749,0.00013450917,0.0006785428,0.00005479497,0.00032674428,0.000008986142,0.97813684,0.000090240865,0.00841043,0.009389083],"study_design_scores_gemma":[0.0024913687,0.0009952317,0.0010901896,0.00012575088,0.00023359012,0.0011806653,0.00019464004,0.000018976365,0.61272913,0.000057626927,0.3794854,0.0013974243],"about_ca_topic_score_codex":0.0004745352,"about_ca_topic_score_gemma":0.00068674126,"teacher_disagreement_score":0.37107497,"about_ca_system_score_codex":0.000073491916,"about_ca_system_score_gemma":0.00016337133,"threshold_uncertainty_score":0.9997616},"labels":[],"label_agreement":null},{"id":"W2035053506","doi":"10.1093/femsle/fnx018","title":"Commentary on “Goodacre R, Timmins ÉM, Rooney PJ, Rowland JJ, Kell DB: Rapid identification of <i>Streptococcus</i> and <i>Enterococcus</i> species using diffuse reflectance-absorbance Fourier transform infrared spectroscopy and artificial neural networks. FEMS Microbiol Lett 1996; 140:233-239”, the most cited paper in the Journal for that year","year":2017,"lang":"en","type":"letter","venue":"FEMS Microbiology Letters","topic":"Spectroscopy Techniques in Biomedical and Chemical Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":165,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"Biotechnology and Biological Sciences Research Council","keywords":"Absorbance; Spectroscopy; Fourier transform infrared spectroscopy; Diffuse reflectance infrared fourier transform; Fourier transform; Analytical Chemistry (journal); Physics; Chemistry; Optics; Chromatography; Biochemistry; Astronomy","score_opus":0.019901987874951562,"score_gpt":0.2850532463945137,"score_spread":0.2651512585195621,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2035053506","genre_codex":"empirical","genre_gemma":"commentary","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.71766055,0.0021067362,0.0018818825,0.27333972,0.0008441424,0.0026717568,0.0013567243,0.00002605583,0.00011241708],"genre_scores_gemma":[0.28276858,0.006149257,0.0008619905,0.6914733,0.008457828,0.0005370408,0.008728097,0.00026296324,0.0007609407],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.99705195,0.00037311733,0.00075067865,0.0007599713,0.00020269888,0.0008615808],"domain_scores_gemma":[0.9981914,0.00025147948,0.0005941376,0.00081056106,0.000073335505,0.00007907203],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0007307098,0.0005801038,0.00060296885,0.0001491082,0.00050570304,0.00019019282,0.0010868595,0.0008637138,0.000015790845],"category_scores_gemma":[0.000069019254,0.0003882257,0.00022736577,0.00014182655,0.0016860033,0.000027218226,0.0001877931,0.0018189371,8.619546e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00038754818,0.000051764982,0.00046631144,0.000052085303,0.000083276085,0.000012746492,0.000076766846,0.0000018666717,0.56300545,5.496132e-7,0.43578184,0.00007982836],"study_design_scores_gemma":[0.001721581,0.00054269,0.00021270095,0.00019973719,0.00012484362,0.00015856292,0.00007938566,0.00009045873,0.47952828,0.00007488613,0.5167486,0.00051825366],"about_ca_topic_score_codex":0.00003438894,"about_ca_topic_score_gemma":0.000051663003,"teacher_disagreement_score":0.434892,"about_ca_system_score_codex":0.00008355892,"about_ca_system_score_gemma":0.000041355346,"threshold_uncertainty_score":0.99985695},"labels":[],"label_agreement":null},{"id":"W2035056781","doi":"10.1111/j.1574-6968.2002.tb11014.x","title":"<i>Salmonella typhimurium</i>DsbA is growth-phase regulated","year":2002,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Bacterial Genetics and Biotechnology","field":"Biochemistry, Genetics and Molecular Biology","cited_by":12,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Queen's University","funders":"Canadian Institutes of Health Research","keywords":"DsbA; Transcription (linguistics); Primer extension; Promoter; Molecular biology; Western blot; Biology; rpoS; Transcription factor; Chemistry; Gene expression; Gene; Genetics; Escherichia coli; Messenger RNA","score_opus":0.008143921082468785,"score_gpt":0.20507260868224467,"score_spread":0.1969286875997759,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2035056781","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98866993,0.0010069954,0.00012800848,0.008806251,0.00066540134,0.00020672023,0.00012195893,0.00006047687,0.0003342578],"genre_scores_gemma":[0.9843239,0.000513257,0.00059276033,0.012604803,0.00042365515,0.000014889376,0.00040294408,0.00004869122,0.001075056],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9983056,0.00007937672,0.0003245537,0.00068793737,0.000040021074,0.0005624635],"domain_scores_gemma":[0.9991232,0.000008633746,0.00012993356,0.0005820961,0.0000672968,0.000088822155],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.000098505116,0.0003128753,0.00027320808,0.00009727327,0.00011229635,0.000024256657,0.00042706856,0.00068974437,0.0003453977],"category_scores_gemma":[0.00002554211,0.00029865914,0.00015089448,0.00016064606,0.0003898873,0.0000029428008,0.00020356053,0.00021610016,0.0002968086],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000056471432,0.00010348236,0.00018954556,0.00000577498,0.0000894742,0.000014694223,0.000029149496,0.0000014183856,0.8631047,0.000014358567,0.13547811,0.0009128161],"study_design_scores_gemma":[0.0011790356,0.00032837817,0.000100439756,0.0000058180544,0.00002230329,0.00017560062,0.0000057914076,0.000012544585,0.7570425,0.000014345449,0.2407893,0.00032394895],"about_ca_topic_score_codex":0.000014149307,"about_ca_topic_score_gemma":0.0000055288933,"teacher_disagreement_score":0.10606221,"about_ca_system_score_codex":0.000016648075,"about_ca_system_score_gemma":0.000011264087,"threshold_uncertainty_score":0.99994653},"labels":[],"label_agreement":null},{"id":"W2035355487","doi":"10.1111/j.1574-6968.2012.02648.x","title":"ACC deaminase genes are conserved among<i>Mesorhizobium</i>species able to nodulate the same host plant","year":2012,"lang":"en","type":"letter","venue":"FEMS Microbiology Letters","topic":"Legume Nitrogen Fixing Symbiosis","field":"Agricultural and Biological Sciences","cited_by":56,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Waterloo","funders":"","keywords":"Mesorhizobium; Biology; Rhizobia; Gene; Genetics; Microbiology; Symbiosis; Bacteria","score_opus":0.01858952085054025,"score_gpt":0.18639047650981105,"score_spread":0.1678009556592708,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2035355487","genre_codex":"empirical","genre_gemma":"commentary","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"commentary","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.570931,0.00050533697,2.961806e-7,0.4246362,0.0010940834,0.00060012593,0.0020572306,0.000137009,0.00003872047],"genre_scores_gemma":[0.13076922,0.000030352536,0.0000763729,0.8556659,0.0062438385,0.0001848607,0.0037970834,0.000021474047,0.0032109069],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9955545,0.0006508238,0.00065721263,0.0011507376,0.00020527907,0.0017814643],"domain_scores_gemma":[0.99774873,0.0008709889,0.00059838465,0.00048763122,0.0001121385,0.00018214903],"candidate_categories":["metaepi_narrow","research_integrity","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00045322848,0.00094204216,0.00096831657,0.00007537044,0.00064399536,0.00022209235,0.0018946509,0.0013633021,0.0008914282],"category_scores_gemma":[0.0000766243,0.00035614858,0.00051318336,0.00043453783,0.0007466409,0.00013808538,0.00056243717,0.0016923293,0.0014543526],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000166504,0.000018436986,0.010113882,0.000012261319,0.00010768786,0.00008787095,0.000068235095,1.6436002e-7,0.49892566,7.397253e-7,0.4906001,0.00004829244],"study_design_scores_gemma":[0.00018200584,0.00009448877,0.053329047,0.00010145611,0.00014115368,0.00021571529,0.00009936354,2.0203481e-7,0.07952082,0.000003414091,0.8653291,0.0009832719],"about_ca_topic_score_codex":0.0017238308,"about_ca_topic_score_gemma":0.0013737627,"teacher_disagreement_score":0.4401618,"about_ca_system_score_codex":0.00017377832,"about_ca_system_score_gemma":0.000020636546,"threshold_uncertainty_score":0.9999331},"labels":[],"label_agreement":null},{"id":"W2035529026","doi":"10.1016/s0378-1097(03)00256-8","title":"Species level identification of conifer associated<i>Ceratocystis</i>sapstain fungi by PCR-RFLP on a β-tubulin gene fragment","year":2003,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Forest Insect Ecology and Management","field":"Environmental Science","cited_by":11,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Ceratocystis; Restriction fragment length polymorphism; Biology; Amplicon; Polymerase chain reaction; Gene; Genetics; Restriction enzyme; Genotyping; Specific identification; Molecular biology; Botany; Microbiology; Genotype; Fungus","score_opus":0.010322677291379161,"score_gpt":0.19474432975556083,"score_spread":0.18442165246418166,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2035529026","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99509937,0.000073034025,0.0013010487,0.00111251,0.0005169466,0.00045068545,0.00021067701,0.000034662306,0.0012010775],"genre_scores_gemma":[0.9912753,0.000034246434,0.00022225549,0.0045613577,0.00001562793,0.000051251754,0.00022713811,0.000017158103,0.0035956595],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99832064,0.00025074102,0.00043556656,0.0004664619,0.0000939615,0.0004326334],"domain_scores_gemma":[0.99926317,0.00008787528,0.00026629094,0.00032081333,0.0000106755915,0.000051193627],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00046807106,0.00021815518,0.00025605195,0.00006526746,0.0001567147,0.000015496786,0.00027433812,0.00018158832,0.0017969775],"category_scores_gemma":[0.00006580232,0.00021198446,0.00008544205,0.00017233254,0.00044970066,0.00006792815,0.00008929307,0.00018823854,0.0008642956],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000023371116,0.0001833894,0.007605517,0.000004304601,0.00007353808,0.000011391593,0.00014701407,0.00083161204,0.8376568,0.00034811246,0.15305214,0.00006282468],"study_design_scores_gemma":[0.0017539614,0.0003452208,0.15022787,0.000019623001,0.00007594568,0.000037579925,0.00011721944,0.000025706278,0.7351462,0.00022258014,0.11141531,0.00061277533],"about_ca_topic_score_codex":0.000092221846,"about_ca_topic_score_gemma":0.00011518697,"teacher_disagreement_score":0.14262235,"about_ca_system_score_codex":0.00034189827,"about_ca_system_score_gemma":0.000010165422,"threshold_uncertainty_score":0.99991363},"labels":[],"label_agreement":null},{"id":"W2036335530","doi":"10.1111/1574-6968.12158","title":"Shiga toxins decrease enterohaemorrhagic<i>Escherichia coli</i>survival within<i>Acanthamoeba castellanii</i>","year":2013,"lang":"he","type":"letter","venue":"FEMS Microbiology Letters","topic":"Legionella and Acanthamoeba research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":21,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institut National de la Recherche Scientifique; Université Laval; Institut universitaire de cardiologie et de pneumologie de Québec; Université de Montréal","funders":"","keywords":"Microbiology; Acanthamoeba; Biology; Pathogen; Escherichia coli; Gentamicin protection assay; Human pathogen; Amoeba (genus); Bacteria","score_opus":0.01442962939083954,"score_gpt":0.2347323046675888,"score_spread":0.22030267527674924,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2036335530","genre_codex":"empirical","genre_gemma":"commentary","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.85539335,0.002519719,0.0003114065,0.12964,0.0066526495,0.0022009579,0.0016283185,0.000110300905,0.0015432921],"genre_scores_gemma":[0.32718158,0.0013497499,0.0011549974,0.62726,0.014096839,0.00023792042,0.016238086,0.0007149435,0.011765852],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9882957,0.0019864496,0.0018934606,0.0036450818,0.0005177682,0.003661536],"domain_scores_gemma":[0.9944169,0.0002773478,0.0011299197,0.0026634585,0.0004421117,0.0010702643],"candidate_categories":["metaepi_narrow","sts","research_integrity","insufficient_payload"],"consensus_categories":["metaepi_narrow","research_integrity","insufficient_payload"],"category_scores_codex":[0.0008624307,0.002468229,0.0021671897,0.00044386584,0.00063469773,0.00043607657,0.0029612356,0.0042631193,0.0018744932],"category_scores_gemma":[0.0002840003,0.0023342723,0.0011979127,0.0005014533,0.0032425118,0.000034718145,0.0016421063,0.0045668646,0.003662978],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00023737308,0.00014967065,0.0005427567,0.00019404986,0.0007455713,0.0008461385,0.00014486967,0.0000193692,0.5418397,0.000007554396,0.45514092,0.00013201703],"study_design_scores_gemma":[0.0028072256,0.00067997444,0.00007878704,0.00024761946,0.00034612775,0.0009681263,0.0002641069,0.000041470048,0.22445752,0.000007421761,0.7674014,0.0027002485],"about_ca_topic_score_codex":0.0014651017,"about_ca_topic_score_gemma":0.00027149476,"teacher_disagreement_score":0.5282118,"about_ca_system_score_codex":0.00033173774,"about_ca_system_score_gemma":0.0010592544,"threshold_uncertainty_score":0.9994701},"labels":[],"label_agreement":null},{"id":"W2038355080","doi":"10.1111/j.1574-6968.2001.tb10644.x","title":"Inhibition of sporulation, glycopeptide antibiotic production and resistance in Streptomyces toyocaensis NRRL 15009 by protein kinase inhibitors","year":2001,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Microbial Natural Products and Biosynthesis","field":"Medicine","cited_by":17,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University; McMaster University Medical Centre","funders":"","keywords":"Glycopeptide; Glycopeptide antibiotic; Genistein; Biochemistry; Streptomyces; Streptomyces coelicolor; Antibiotics; Protein kinase A; Kinase; Phosphoprotein; Biology; Microbiology; Chemistry; Bacteria; Phosphorylation; Staphylococcus aureus; Vancomycin","score_opus":0.006234056624008142,"score_gpt":0.20718931189507514,"score_spread":0.200955255271067,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2038355080","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9804423,0.0009348004,0.000003974284,0.01758058,0.0001504563,0.0007692262,0.0000293594,0.0000352411,0.000054089487],"genre_scores_gemma":[0.9974092,0.00011032916,0.00096479955,0.0007772505,0.00015586652,0.0000017971148,0.00015527803,0.000017903445,0.00040755954],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9985781,0.00009194674,0.00045914043,0.0005295854,0.00006244246,0.00027882124],"domain_scores_gemma":[0.99939054,0.000021870763,0.00021748069,0.00023368909,0.00008835803,0.000048055357],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00027463984,0.00020402411,0.00037108152,0.00022457451,0.000060512073,0.000010181769,0.00004586548,0.00016557775,0.00003066578],"category_scores_gemma":[0.00019864623,0.00017269766,0.000052353833,0.00038339142,0.00030174796,0.00012466856,0.000031433327,0.00020975682,0.0000074250656],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00034822378,0.000105135885,0.022233594,0.00012362072,0.0000237981,0.00003139749,0.00012313305,0.0000012274414,0.9627029,0.000008059652,0.013531486,0.0007674577],"study_design_scores_gemma":[0.000617598,0.00009677447,0.016303066,0.00066642725,0.000033453936,0.000088061395,0.000057285022,5.757401e-7,0.97691673,0.000015196402,0.005010976,0.00019388302],"about_ca_topic_score_codex":0.0001260721,"about_ca_topic_score_gemma":0.00021906316,"teacher_disagreement_score":0.016966943,"about_ca_system_score_codex":0.0000800969,"about_ca_system_score_gemma":0.00002443537,"threshold_uncertainty_score":0.7042406},"labels":[],"label_agreement":null},{"id":"W2038898991","doi":"10.1111/j.1574-6968.2002.tb10981.x","title":"Studies on the production of quorum-sensing signal molecules in<i>Mannheimia haemolytica</i>A1 and other Pasteurellaceae species","year":2002,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Bacterial biofilms and quorum sensing","field":"Biochemistry, Genetics and Molecular Biology","cited_by":26,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Quorum sensing; Vibrio harveyi; Microbiology; Biology; Actinobacillus pleuropneumoniae; Pasteurella multocida; Pasteurellaceae; Autoinducer; Escherichia coli; Bacteria; Bioluminescence; Luciferase; Virulence; Gene; Vibrio; Serotype; Genetics; Biochemistry; Haemophilus influenzae","score_opus":0.025176650930181177,"score_gpt":0.22038812148416728,"score_spread":0.1952114705539861,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2038898991","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9915004,0.0008423685,0.0000067016936,0.006917662,0.00040266913,0.00017342556,0.000010043017,0.0000072154676,0.00013952545],"genre_scores_gemma":[0.996336,0.00008379863,0.00022362806,0.0029060286,0.0002309211,0.0000016337358,0.000009031276,0.000018435316,0.0001905249],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9989795,0.00014349658,0.0002489006,0.00035067796,0.000032534568,0.00024487416],"domain_scores_gemma":[0.99955076,0.000045411718,0.00012462994,0.00022683004,0.00003249428,0.000019858959],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00018459285,0.00018206824,0.00021525727,0.000055236804,0.00008347751,0.000014468634,0.00008217974,0.00011991388,0.000015055727],"category_scores_gemma":[0.00008274535,0.00012916155,0.000056214318,0.00007055309,0.00053061766,0.0000028138384,0.00007624503,0.00012394076,0.000007150896],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000057708246,0.00002267354,0.0010150447,0.00000952842,0.000077692705,0.0000043044647,0.00028826596,0.000041661086,0.99260974,0.00005577062,0.005450821,0.00036676464],"study_design_scores_gemma":[0.00022429904,0.00015996488,0.00066662696,0.000065017615,0.00001784148,0.00008891578,0.0003117962,0.000013785351,0.9821585,0.0000036867368,0.016105015,0.00018458422],"about_ca_topic_score_codex":0.00000982682,"about_ca_topic_score_gemma":0.00005666044,"teacher_disagreement_score":0.010654194,"about_ca_system_score_codex":0.000012396645,"about_ca_system_score_gemma":0.000004970218,"threshold_uncertainty_score":0.5267055},"labels":[],"label_agreement":null},{"id":"W2038955183","doi":"10.1016/j.femsle.2004.10.011","title":"The<i>Aeromonas hydrophila</i>LuxR homologue AhyR regulates the<i>N</i>-acyl homoserine lactone synthase, AhyI positively and negatively in a growth phase-dependent manner","year":2004,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Bacterial biofilms and quorum sensing","field":"Biochemistry, Genetics and Molecular Biology","cited_by":58,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"Biotechnology and Biological Sciences Research Council; Medical Research Council","keywords":"Quorum sensing; Biology; Electrophoretic mobility shift assay; Homoserine; Operon; Mutant; Gene; Molecular biology; Gene expression; Genetics; Microbiology; Virulence","score_opus":0.005121153736226272,"score_gpt":0.20991400607207353,"score_spread":0.20479285233584726,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2038955183","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9816325,0.00083993305,0.000025010018,0.016566701,0.00033753278,0.0003978904,0.0001277265,0.00002606723,0.000046657286],"genre_scores_gemma":[0.9951192,0.00038665003,0.00021728063,0.0036082636,0.00024980286,0.000025835323,0.00026250165,0.000045656656,0.000084769395],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9979822,0.00022000304,0.00039965814,0.0006663934,0.00005949359,0.00067227246],"domain_scores_gemma":[0.9992003,0.00007212979,0.00018853757,0.00039767777,0.00005804689,0.0000833207],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00032922075,0.00039247758,0.00033158454,0.000065411165,0.0003953715,0.000082096834,0.0003383969,0.00027804513,0.000004477849],"category_scores_gemma":[0.0000578558,0.00026879867,0.00011362122,0.00014085749,0.0009806079,0.000015230486,0.00027743875,0.00031642383,0.000014642886],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00040256657,0.00010102047,0.00026450492,0.000007327554,0.00011355747,0.00010239774,0.00016071678,0.000017035092,0.99776965,0.000117996504,0.0005812859,0.00036193235],"study_design_scores_gemma":[0.0029859615,0.0004444871,0.006546415,0.00004563591,0.000035142202,0.0008093181,0.00008397189,0.000003061191,0.981641,0.0000828676,0.006874245,0.00044787535],"about_ca_topic_score_codex":0.00046820485,"about_ca_topic_score_gemma":0.0004567329,"teacher_disagreement_score":0.016128639,"about_ca_system_score_codex":0.000048283517,"about_ca_system_score_gemma":0.000049318085,"threshold_uncertainty_score":0.9999764},"labels":[],"label_agreement":null},{"id":"W2039150371","doi":"10.1111/j.1574-6968.1997.tb10444.x","title":"Expression of P, S, and F1C adhesins by cytotoxic necrotizing factor 1-producing Escherichia coli from septicemic and diarrheic pigs","year":2006,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Clostridium difficile and Clostridium perfringens research","field":"Medicine","cited_by":40,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Cegep de Saint Hyacinthe","funders":"","keywords":"Bacterial adhesin; Fimbria; Microbiology; Biology; Immunofluorescence; Agglutination (biology); Hemagglutination; Escherichia coli; Antiserum; Serotype; Virology; Antibody; Gene; Immunology; Virus; Biochemistry","score_opus":0.013257281836875018,"score_gpt":0.24520186949967954,"score_spread":0.2319445876628045,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2039150371","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9948994,0.0027013202,0.000041488733,0.0014731776,0.00008730517,0.00041942802,0.00030081064,0.000044812445,0.000032256125],"genre_scores_gemma":[0.99810404,0.00015655386,0.00045746242,0.00060251605,0.00019308362,0.000013602461,0.00032172527,0.000036708567,0.00011433122],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9984143,0.00009810992,0.000371278,0.0005810861,0.000091113914,0.00044412128],"domain_scores_gemma":[0.9991817,0.00020358032,0.00013980559,0.0003136944,0.000043771404,0.00011747018],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000116327705,0.00025790816,0.0004956528,0.00012412731,0.000114026414,0.000024227942,0.00008682204,0.00021431712,0.00008711604],"category_scores_gemma":[0.00007361524,0.00022848586,0.00007064811,0.00014227681,0.0003582963,0.000059976974,0.00013610275,0.00037772913,0.000012051561],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00016287943,0.000077731755,0.019158423,0.000072753486,0.000049650847,0.000026690765,0.00023738053,0.0000017764874,0.97101694,8.481389e-7,0.0089608105,0.00023410055],"study_design_scores_gemma":[0.0014773931,0.00014941573,0.02337466,0.00017482461,0.000065833075,0.000050831848,0.00009224324,0.000020427728,0.9729098,0.0000028031536,0.0014721788,0.00020957761],"about_ca_topic_score_codex":0.0010782283,"about_ca_topic_score_gemma":0.000026493448,"teacher_disagreement_score":0.0074886316,"about_ca_system_score_codex":0.0000737624,"about_ca_system_score_gemma":0.000047449885,"threshold_uncertainty_score":0.9317383},"labels":[],"label_agreement":null},{"id":"W2039919664","doi":"10.1111/j.1574-6968.1997.tb12630.x","title":"The lipopolysaccharide of Helicobacter mustelae type strain ATCC 43772 expresses the monofucosyl A type 1 histo-blood group epitope","year":2006,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Helicobacter pylori-related gastroenterology studies","field":"Medicine","cited_by":40,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"National Research Council Canada; Institute for Biological Sciences","funders":"","keywords":"Epitope; Strain (injury); Lipopolysaccharide; Microbiology; Type (biology); Biology; Virology; Chemistry; Antibody; Immunology; Anatomy","score_opus":0.010204048507020369,"score_gpt":0.21928911286343905,"score_spread":0.2090850643564187,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2039919664","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9743283,0.0023944825,0.00003689664,0.021021016,0.0014258341,0.0005548574,0.00006090926,0.00009106981,0.000086661596],"genre_scores_gemma":[0.9906068,0.0003616377,0.00026795294,0.007491919,0.0005543202,0.000040264546,0.00016415319,0.000057477035,0.00045548927],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9976214,0.00029450093,0.00069445634,0.00050279143,0.00010484468,0.00078196963],"domain_scores_gemma":[0.9982406,0.00036631903,0.0003358372,0.0007837146,0.00020459059,0.000068949324],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003980201,0.00039563046,0.0005906423,0.00011510614,0.00031868427,0.000023197807,0.00047830908,0.00026933686,0.0000645932],"category_scores_gemma":[0.0001556901,0.00023508303,0.00018572135,0.0002535635,0.0011657525,0.00006685847,0.0002077502,0.0006783775,0.000102882856],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00041674668,0.00013488176,0.035684973,0.000020400052,0.00068510976,0.000051862513,0.0002881052,0.000006741882,0.9340441,0.00006757052,0.02817701,0.0004224528],"study_design_scores_gemma":[0.012925313,0.0049263854,0.22053705,0.0005542155,0.003564083,0.0037600813,0.0015021329,0.000019381487,0.35830793,0.00017320925,0.3920868,0.0016434132],"about_ca_topic_score_codex":0.00031874748,"about_ca_topic_score_gemma":0.00028683318,"teacher_disagreement_score":0.5757362,"about_ca_system_score_codex":0.00008454499,"about_ca_system_score_gemma":0.000052414296,"threshold_uncertainty_score":0.9586408},"labels":[],"label_agreement":null},{"id":"W2040434273","doi":"10.1111/j.1574-6968.2010.01921.x","title":"<i>Escherichia coli</i>ArgR mutants defective in<i>cer</i>/Xer recombination, but not in DNA binding","year":2010,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Bacterial Genetics and Biotechnology","field":"Biochemistry, Genetics and Molecular Biology","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Repressor; Mutant; Repressor lexA; Escherichia coli; Lac repressor; DNA; Molecular biology; Biology; SOS response; Mutagenesis; Chemistry; lac operon; Gene; Biochemistry; Gene expression","score_opus":0.0050988638993975976,"score_gpt":0.2048619328460262,"score_spread":0.1997630689466286,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2040434273","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.996258,0.000042397107,0.000023707587,0.0017957602,0.0013227923,0.00032978057,0.00007471613,0.00002296696,0.00012984317],"genre_scores_gemma":[0.99576044,0.000071476636,0.0006145909,0.0029679812,0.000150062,0.000041548345,0.0002599805,0.000034887275,0.00009901142],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9982481,0.000120814664,0.0003753847,0.00066125015,0.000035323836,0.00055912515],"domain_scores_gemma":[0.9993632,0.000024160929,0.00013937638,0.00037406676,0.000045339628,0.000053861775],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00030799845,0.00027237122,0.0002954728,0.00021558984,0.00006360728,0.000022224553,0.0003707587,0.0008058217,0.000035810208],"category_scores_gemma":[0.00009012034,0.0002785562,0.00008322378,0.0002561206,0.00028918037,0.000005893784,0.00019361706,0.0005542073,0.00005777376],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010310265,0.00008741008,0.009241612,0.0000056154254,0.00002880371,0.000015337013,0.000049430648,0.0000037425707,0.9892418,0.000025864516,0.00054412876,0.00065319444],"study_design_scores_gemma":[0.0012339177,0.00014804349,0.017605085,0.0000118013595,0.000007831381,0.000049016868,0.0000304935,0.0000037297646,0.9624948,0.00002770356,0.0180445,0.00034310154],"about_ca_topic_score_codex":0.0000789355,"about_ca_topic_score_gemma":0.0011714261,"teacher_disagreement_score":0.026746983,"about_ca_system_score_codex":0.000039572216,"about_ca_system_score_gemma":0.000061706276,"threshold_uncertainty_score":0.9999667},"labels":[],"label_agreement":null},{"id":"W2041235271","doi":"10.1111/j.1574-6968.2002.tb11086.x","title":"Vacuolar H<sup>+</sup>-ATPase, but not mitochondrial F<sub>1</sub>F<sub>0</sub>-ATPase, is required for NaCl tolerance in<i>Saccharomyces cerevisiae</i>","year":2002,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Plant Stress Responses and Tolerance","field":"Agricultural and Biological Sciences","cited_by":32,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"Natural Sciences and Engineering Research Council of Canada; Directorate for Biological Sciences","keywords":"Vacuole; ATPase; V-ATPase; Biochemistry; Saccharomyces cerevisiae; Antiporter; F-ATPase; ATP synthase; Adenosine triphosphate; Proton transport; Chemiosmosis; Biology; Chemistry; Enzyme; Yeast; Membrane; Gene; Cytoplasm; Chloroplast; Thylakoid","score_opus":0.016668601886909138,"score_gpt":0.19884166427116784,"score_spread":0.1821730623842587,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2041235271","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97975034,0.0012036448,0.000028164466,0.013515702,0.00080062455,0.0011146776,0.0033805096,0.0001733548,0.00003301099],"genre_scores_gemma":[0.9805844,0.0009759186,0.00020938183,0.015869068,0.0013621785,0.0002393015,0.0006585303,0.000016520282,0.00008470766],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99547887,0.00035207078,0.00095042994,0.0014837319,0.00020677161,0.0015281502],"domain_scores_gemma":[0.9980958,0.0008280765,0.00040960865,0.00031827335,0.00010565194,0.00024257826],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0002546223,0.0007724433,0.0010182535,0.00010521653,0.0005172051,0.00015540583,0.0009374929,0.0006080098,0.00013040019],"category_scores_gemma":[0.000113582675,0.00043034842,0.0005248076,0.00057268573,0.00036895717,0.00037235068,0.00017342756,0.00055607466,0.0004019905],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0007373847,0.00016100623,0.00082547514,0.00004164098,0.00006986413,0.00009512513,0.00016020196,0.000119910015,0.93699336,0.000010220283,0.047497727,0.0132880565],"study_design_scores_gemma":[0.0021956053,0.00038265425,0.004388048,0.00023304814,0.000055413537,0.00020083581,0.00007463113,0.0006002974,0.8975203,0.000029266757,0.09314467,0.0011752507],"about_ca_topic_score_codex":0.00010946123,"about_ca_topic_score_gemma":0.0002265027,"teacher_disagreement_score":0.04564694,"about_ca_system_score_codex":0.00011294881,"about_ca_system_score_gemma":0.000018818619,"threshold_uncertainty_score":0.9998148},"labels":[],"label_agreement":null},{"id":"W2041725454","doi":"10.1016/j.femsle.2005.01.001","title":"Assessment of a new technique combining a viability test, whole-cell hybridization and laser-scanning cytometry for the direct counting of viable Enterobacteriaceae cells in drinking water","year":2005,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Fecal contamination and water quality","field":"Environmental Science","cited_by":24,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval; Polytechnique Montréal; Natural Sciences and Engineering Research Council of Canada","funders":"Natural Sciences and Engineering Research Council of Canada; Canadian Water Network","keywords":"Enterobacteriaceae; Enumeration; Microbiology; Flow cytometry; Cytometry; Fish <Actinopterygii>; Biology; Molecular biology; Escherichia coli; Fishery; Biochemistry; Mathematics","score_opus":0.008673491638103619,"score_gpt":0.23272386724962324,"score_spread":0.2240503756115196,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2041725454","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9762444,0.000006748972,0.022317579,0.00073148153,0.00005213797,0.00051449006,0.000019041521,0.000013718511,0.000100416735],"genre_scores_gemma":[0.9934701,0.0000017525574,0.0056795226,0.00069651013,0.000014141185,0.000028212058,0.000029792003,0.000009147869,0.00007086718],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9989844,0.00011442165,0.00036863342,0.0002544829,0.000050617975,0.00022745923],"domain_scores_gemma":[0.9993697,0.00028186647,0.00016230039,0.00015156863,0.000010947594,0.000023649853],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0011140226,0.00011702457,0.00022407099,0.000057308673,0.000066889406,0.000015380338,0.00014625076,0.000060792354,0.000054615095],"category_scores_gemma":[0.000024444922,0.000084206804,0.0000416347,0.000106234096,0.00017153376,0.00012003121,0.0001423837,0.00011006353,0.0000020562172],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000068485697,0.000050675662,0.22480237,0.000023308636,0.0000049483438,1.8962587e-7,0.00038973463,0.0005117079,0.77386624,7.7345993e-7,0.00015314986,0.00019006076],"study_design_scores_gemma":[0.0006086318,0.000065338216,0.06766701,0.000040033854,0.000014398708,0.0000025848624,0.000050192324,0.0013230563,0.9270462,0.000008422774,0.0030587842,0.000115394265],"about_ca_topic_score_codex":0.00025173443,"about_ca_topic_score_gemma":0.00006934322,"teacher_disagreement_score":0.15713537,"about_ca_system_score_codex":0.000118051496,"about_ca_system_score_gemma":0.00000765817,"threshold_uncertainty_score":0.34338537},"labels":[],"label_agreement":null},{"id":"W2042263556","doi":"10.1111/j.1574-6968.2006.00230.x","title":"Utilization of myoglobin as a heme source by<i>Haemophilus influenzae</i>requires binding of myoglobin to haptoglobin","year":2006,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Hemoglobin structure and function","field":"Biochemistry, Genetics and Molecular Biology","cited_by":14,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institute of Allergy and Infectious Diseases; Vector Institute","keywords":"Myoglobin; Haptoglobin; Haemophilus influenzae; Heme; Chemistry; Microbiology; Hemeprotein; Biochemistry; Medicine; Biology; Internal medicine; Enzyme; Antibiotics","score_opus":0.007802254762853338,"score_gpt":0.23016306445427398,"score_spread":0.22236080969142064,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2042263556","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9899059,0.00038332393,0.007805324,0.000572533,0.00036483642,0.00037393178,0.00023374184,0.00003026505,0.000330126],"genre_scores_gemma":[0.9941726,0.00001706731,0.0008934167,0.0031214193,0.0002157256,0.000019150471,0.0011599218,0.000041527408,0.00035918658],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99809206,0.00012311396,0.0006383794,0.00058114843,0.00009975844,0.00046553157],"domain_scores_gemma":[0.9989873,0.000025909932,0.00033502767,0.0004563428,0.000115758405,0.00007965566],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0002042293,0.00032834316,0.0004178786,0.00017088125,0.00008426305,0.000013573713,0.0003276663,0.00037339696,0.000052448442],"category_scores_gemma":[0.000074138516,0.0003278625,0.00017444315,0.0003226031,0.00028319127,0.0000109841,0.00016573755,0.00012664656,0.000033784407],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00019345719,0.000060957416,0.004793393,0.000029197352,0.000075310425,0.0000021021933,0.0000614295,0.00044076212,0.9401156,0.000050877097,0.052938167,0.00123875],"study_design_scores_gemma":[0.00072426,0.0003554439,0.0006953317,0.00003208029,0.00003372717,0.00006568427,0.00004353384,0.000005087738,0.9005013,0.000024209716,0.097229585,0.00028976882],"about_ca_topic_score_codex":0.00043708997,"about_ca_topic_score_gemma":0.000025416864,"teacher_disagreement_score":0.044291414,"about_ca_system_score_codex":0.000048881964,"about_ca_system_score_gemma":0.000060096325,"threshold_uncertainty_score":0.9999173},"labels":[],"label_agreement":null},{"id":"W2042334041","doi":"10.1111/j.1574-6968.2001.tb10615.x","title":"Assessment of the serodiagnostic potential of nine novel proteins from<i>Mycobacterium tuberculosis</i>","year":2001,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Tuberculosis Research and Epidemiology","field":"Medicine","cited_by":26,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Victoria","funders":"National Institute of Allergy and Infectious Diseases","keywords":"Mycobacterium tuberculosis; Antigen; Tuberculosis; Recombinant DNA; Virology; Serology; Biology; Antibody; Microbiology; Tuberculosis diagnosis; Immunology; Gene; Medicine; Genetics; Pathology","score_opus":0.013743841924019904,"score_gpt":0.2769360369701857,"score_spread":0.2631921950461658,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2042334041","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.96871614,0.00015423403,0.0009344248,0.02853609,0.00044669065,0.0007151205,0.00027220967,0.00002292674,0.00020214471],"genre_scores_gemma":[0.99001324,0.00011416264,0.0018894792,0.007314032,0.00024005162,0.00004533863,0.00027127017,0.00002352563,0.00008888581],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9980588,0.0002801455,0.0006143972,0.0003986053,0.00012243826,0.00052564155],"domain_scores_gemma":[0.99857754,0.0002910856,0.00026438377,0.0006347197,0.00012351673,0.000108756205],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00038400042,0.0002244994,0.00069392833,0.00012134471,0.00006301463,0.0000040275104,0.00031078953,0.00022196479,0.0003782008],"category_scores_gemma":[0.0003406844,0.00014910396,0.00029444208,0.00024573688,0.0005847874,0.00004198723,0.00020277634,0.00046692308,0.000018171373],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010827475,0.00024384071,0.25592566,0.000035658573,0.00027303267,0.000016442491,0.000021136302,0.000057295325,0.73678696,0.000015762396,0.006421397,0.00009452174],"study_design_scores_gemma":[0.0019440859,0.0003324905,0.9102043,0.00014694226,0.00018259446,0.00033161874,0.000020785754,0.000077481585,0.082066864,0.000007666619,0.004536947,0.00014824179],"about_ca_topic_score_codex":0.0011951826,"about_ca_topic_score_gemma":0.00008471074,"teacher_disagreement_score":0.6547201,"about_ca_system_score_codex":0.00008392291,"about_ca_system_score_gemma":0.00011572939,"threshold_uncertainty_score":0.6080283},"labels":[],"label_agreement":null},{"id":"W2043130403","doi":"10.1111/j.1574-6968.2008.01375.x","title":"Regulation of<i>sagA, siaA</i>and<i>scpC</i>by SilCR, a putative signaling peptide of<i>Streptococcus pyogenes</i>","year":2008,"lang":"he","type":"article","venue":"FEMS Microbiology Letters","topic":"Streptococcal Infections and Treatments","field":"Medicine","cited_by":13,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Canadian Institutes of Health Research","keywords":"Streptococcus pyogenes; Pathogenesis; Biology; In vitro; Microbiology; Downregulation and upregulation; In vivo; Gene; Gene expression; Bacteria; Immunology; Genetics; Staphylococcus aureus","score_opus":0.016459438923455402,"score_gpt":0.23865940806380853,"score_spread":0.22219996914035312,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2043130403","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9924212,0.0032693231,0.00055549684,0.0008954027,0.0004893203,0.0013835601,0.0006326673,0.000056331883,0.00029666544],"genre_scores_gemma":[0.996257,0.0003946368,0.0006998217,0.0010409373,0.0001872465,0.000081265905,0.000644134,0.00006416343,0.00063078036],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99699503,0.00031295957,0.001114349,0.00079656724,0.00013509503,0.00064600335],"domain_scores_gemma":[0.9978121,0.0004679335,0.0008185329,0.0004910571,0.00022449916,0.00018588525],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00023195328,0.0005742552,0.0011751149,0.00031036302,0.000263186,0.000009347803,0.0001507366,0.0004384989,0.00026899477],"category_scores_gemma":[0.00008623476,0.0005294458,0.00038464033,0.00046202826,0.0014843793,0.00011230161,0.00010811351,0.0003850668,0.00009017818],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000202186,0.00038404466,0.17496376,0.00012508706,0.00095953414,0.0000579787,0.0011382042,0.00012538614,0.8133669,0.000016512877,0.007976382,0.00068404624],"study_design_scores_gemma":[0.0055490597,0.0012430694,0.0532338,0.00050380826,0.00085744227,0.0005954452,0.00028495755,0.000037968694,0.9309848,0.000026542022,0.006115369,0.0005677546],"about_ca_topic_score_codex":0.0005204649,"about_ca_topic_score_gemma":0.000009020455,"teacher_disagreement_score":0.12172996,"about_ca_system_score_codex":0.00015202118,"about_ca_system_score_gemma":0.00013693293,"threshold_uncertainty_score":0.9997157},"labels":[],"label_agreement":null},{"id":"W2043180876","doi":"10.1016/j.femsle.2004.02.027","title":"Cel6B of Thermobifidus fusca and a Cel5-CBM6 of Ruminococcus albus containing a cellulose binding site show synergistic effect on hydrolysis of native plant cellulose","year":2004,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Biofuel production and bioconversion","field":"Engineering","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"","keywords":"Cellulase; Cellulose; Xylanase; Hydrolysis; Chemistry; Enzymatic hydrolysis; Biochemistry; Ruminococcus; Substrate (aquarium); Enzyme; Biology","score_opus":0.005764198033533379,"score_gpt":0.17908728369483498,"score_spread":0.1733230856613016,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2043180876","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99831575,0.0003665074,0.00015089808,0.00013304276,0.00035214363,0.00033391398,0.00019116465,0.000050814426,0.00010573696],"genre_scores_gemma":[0.9995524,0.000030344692,0.000108102984,0.000091929316,0.000038772258,0.000009151598,0.00012182066,0.00002635011,0.000021084668],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9988296,0.00010300832,0.0003932674,0.00032025922,0.000068776084,0.00028508168],"domain_scores_gemma":[0.9993176,0.00017072463,0.00021602584,0.00021697253,0.000027056329,0.00005166166],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00025859676,0.00027169017,0.0005333005,0.0003203218,0.000036161764,0.000005714773,0.0001469486,0.00020289041,0.00002569235],"category_scores_gemma":[0.000021954507,0.00023172233,0.00012873519,0.00019176518,0.00032650767,0.000043218595,0.000043513093,0.00024405317,0.0000124794715],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00027488143,0.000047336995,0.0007023605,0.00044076392,0.00018138555,0.00001742762,0.0010353702,0.0011610782,0.9956687,0.000011555898,0.0001913832,0.0002677207],"study_design_scores_gemma":[0.0014596707,0.00069457694,0.00037459686,0.00018910118,0.00009003896,0.000022452141,0.000090569774,0.00018406802,0.99641746,0.0000027945227,0.0002538863,0.00022078786],"about_ca_topic_score_codex":0.00011143337,"about_ca_topic_score_gemma":0.0000065380723,"teacher_disagreement_score":0.0012366656,"about_ca_system_score_codex":0.00007972051,"about_ca_system_score_gemma":0.000013628052,"threshold_uncertainty_score":0.9449362},"labels":[],"label_agreement":null},{"id":"W2045404590","doi":"10.1016/s0378-1097(03)00178-2","title":"The collagenase activity of<i>Porphyromonas gingivalis</i>is due to Arg-gingipain","year":2003,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Oral microbiology and periodontitis research","field":"Dentistry","cited_by":59,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"Canadian Institutes of Health Research","keywords":"Porphyromonas gingivalis; Leupeptin; Collagenase; Pepstatin; Chemistry; Gel electrophoresis; Cathepsin; Protease; Polyacrylamide gel electrophoresis; Biochemistry; Molecular biology; Autolysis (biology); Sodium dodecyl sulfate; Microbiology; Type I collagen; Proteases; Enzyme; Biology; Bacteria","score_opus":0.015763288506577114,"score_gpt":0.2706007861452954,"score_spread":0.2548374976387183,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2045404590","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99201035,0.00046159202,0.00047435038,0.0043220012,0.0013058721,0.0004480385,0.0003770012,0.000050246384,0.00055055635],"genre_scores_gemma":[0.9910988,0.000027212469,0.00039376048,0.0055729393,0.000092731156,0.00003733131,0.00004068163,0.000035462974,0.0027010376],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99727225,0.0009177014,0.0003674051,0.00054455746,0.00007544467,0.00082265347],"domain_scores_gemma":[0.9984896,0.00045092235,0.0001591267,0.0006828424,0.000092103604,0.00012540795],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0010017317,0.00028368758,0.0004467033,0.0001422334,0.00048126603,0.000055931265,0.0005924028,0.00027310412,0.0006050048],"category_scores_gemma":[0.0002654546,0.00022200374,0.00022289858,0.0003943019,0.0006607048,0.00007012873,0.0001620642,0.0004491647,0.0011009547],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000105650994,0.0000483081,0.0070694583,0.000012852919,0.0001330895,0.00016350405,0.00019134591,0.000008412687,0.86423665,0.00020127682,0.12730534,0.00052412524],"study_design_scores_gemma":[0.00055036537,0.00009735762,0.010028903,0.000021875261,0.0000217213,0.0005089777,0.000054290682,0.0000015015765,0.70763034,0.000053203636,0.2807247,0.00030675618],"about_ca_topic_score_codex":0.00020643193,"about_ca_topic_score_gemma":0.00023701058,"teacher_disagreement_score":0.15660629,"about_ca_system_score_codex":0.00008232497,"about_ca_system_score_gemma":0.000083536026,"threshold_uncertainty_score":0.9996768},"labels":[],"label_agreement":null},{"id":"W2046120950","doi":"10.1111/j.1574-6968.2002.tb11137.x","title":"Production of PHA depolymerase A (PhaZ5) from<i>Paucimonas lemoignei</i>in<i>Bacillus subtilis</i>","year":2002,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"biodegradable polymer synthesis and properties","field":"Materials Science","cited_by":22,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"Natural Sciences and Engineering Research Council of Canada; Deutsche Forschungsgemeinschaft","keywords":"Bacillus subtilis; Escherichia coli; Bacillaceae; Glycosylation; Recombinant DNA; Protease; Extracellular; Bacillales; Biochemistry; Enzyme; Biology; Mutant; Molecular biology; Bacteria; Specific activity; Microbiology; Chemistry; Gene","score_opus":0.01853236759948067,"score_gpt":0.19239867116858067,"score_spread":0.1738663035691,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2046120950","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97494113,0.018632123,0.000037790727,0.0043739984,0.0014867976,0.00018553417,0.00011660404,0.000066186985,0.00015981412],"genre_scores_gemma":[0.99679685,0.00013362496,0.00056934246,0.0019655412,0.00017867262,0.000031385498,0.000028616958,0.00002516404,0.00027081903],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99800456,0.00025733386,0.0005294573,0.00061623036,0.000083896804,0.00050855236],"domain_scores_gemma":[0.99913573,0.00009114239,0.0002159034,0.0004725803,0.000027251372,0.000057361536],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00026029613,0.00026847888,0.00045228354,0.00013441224,0.00010900926,0.000026214862,0.00036765423,0.00016205573,0.0011497831],"category_scores_gemma":[0.00004869088,0.00022072007,0.0001041848,0.00018543316,0.00047362468,0.00018516187,0.000078772195,0.00016259024,0.0003172996],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007614768,0.00011996901,0.0013860391,0.000017680972,0.000018388544,0.00001805828,0.00075173384,0.0000042081115,0.9836508,0.000004589487,0.007281843,0.006670524],"study_design_scores_gemma":[0.00038759527,0.000048054648,0.0003430006,0.00005024062,0.00002148732,0.000050356466,0.00007431754,0.000017743936,0.9936456,0.000008987605,0.005094371,0.00025826105],"about_ca_topic_score_codex":0.001900965,"about_ca_topic_score_gemma":0.00024503752,"teacher_disagreement_score":0.021855682,"about_ca_system_score_codex":0.00004226028,"about_ca_system_score_gemma":0.000015394284,"threshold_uncertainty_score":0.9997633},"labels":[],"label_agreement":null},{"id":"W2046225429","doi":"10.1111/j.1574-6968.2006.00289.x","title":"The enhancin-like metalloprotease from the<i>Bacillus cereus</i>group is regulated by the pleiotropic transcriptional activator PlcR but is not essential for larvicidal activity","year":2006,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Bacillus and Francisella bacterial research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":24,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Institut National de la Recherche Agronomique; Agence Universitaire de la Francophonie","keywords":"Virulence; Bacillus cereus; Biology; Microbiology; Gene; Metalloproteinase; Bacillus thuringiensis; Hemolysin; Quorum sensing; Genetics; Bacteria; Matrix metalloproteinase","score_opus":0.00706815590722102,"score_gpt":0.21466502546196697,"score_spread":0.20759686955474596,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2046225429","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9680602,0.00097490347,0.0053039677,0.02090648,0.00078527175,0.000882972,0.0030526575,0.000017382354,0.00001618219],"genre_scores_gemma":[0.9875974,0.000089124056,0.00009608312,0.008456019,0.0008788266,0.00018008504,0.0013208768,0.000044519096,0.0013370494],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99775344,0.00034621003,0.00032053917,0.00068828237,0.00014275737,0.0007487765],"domain_scores_gemma":[0.9988011,0.00018355288,0.00016356996,0.0006833483,0.00009590536,0.000072533825],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00042195906,0.00035012444,0.000275688,0.00001928917,0.00082997506,0.000119142765,0.00074885663,0.00035402994,0.00013166488],"category_scores_gemma":[0.000038012997,0.00020094901,0.00034626052,0.00009449978,0.0007291139,0.000011782935,0.00013948097,0.00034701749,0.000025271927],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0009647855,0.00006639976,0.000045787212,0.000005630745,0.00028324913,0.0000012034543,0.00005227892,0.0000021364651,0.914362,0.000018755434,0.08289528,0.0013024784],"study_design_scores_gemma":[0.0009575715,0.000085355234,0.0015933141,0.0000033415156,0.000039284176,0.000009335217,0.000015316857,0.000016090591,0.6210163,0.00002549305,0.37605664,0.00018189443],"about_ca_topic_score_codex":0.0010324032,"about_ca_topic_score_gemma":0.00048979867,"teacher_disagreement_score":0.29334566,"about_ca_system_score_codex":0.00004995344,"about_ca_system_score_gemma":0.00008792828,"threshold_uncertainty_score":0.81944627},"labels":[],"label_agreement":null},{"id":"W2047117498","doi":"10.1016/s0378-1097(03)00961-3","title":"The role of histidine residues conserved in the putative ATP-binding region of macrolide 2â²-phosphotransferase II","year":2004,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Genomics and Rare Diseases","field":"Biochemistry, Genetics and Molecular Biology","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Institute of Genetics","keywords":"Oleandomycin; Phosphotransferase; Enzyme; Biochemistry; Histidine; Conserved sequence; Mutant; Binding site; Chemistry; Biology; Stereochemistry; Peptide sequence; Antibiotics; Erythromycin","score_opus":0.005725060459808883,"score_gpt":0.2057119610132129,"score_spread":0.199986900553404,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2047117498","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9946801,0.0021732426,0.000039681236,0.002631795,0.00009009968,0.00021450393,0.000106743944,0.0000031854615,0.000060656672],"genre_scores_gemma":[0.99839,0.00022677139,0.00006829256,0.0010305931,0.000039317183,0.0000152516295,0.00019755958,0.000011685461,0.00002049018],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9991249,0.00011271181,0.00028139364,0.00022064972,0.000031750496,0.00022862022],"domain_scores_gemma":[0.99948734,0.000052558367,0.00013014083,0.00026657426,0.000041648913,0.000021725917],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00019067252,0.00013516964,0.00016928882,0.000036972728,0.00013468391,0.0000061129626,0.00031257086,0.00009988583,0.0000014933097],"category_scores_gemma":[0.00004191655,0.000087330875,0.00011506212,0.00007902628,0.00043579433,0.0000021225032,0.000050575207,0.00009701218,0.0000011736934],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00030223638,0.00005686977,0.0019366835,0.000007677882,0.000060157097,0.000020400172,0.00084814854,0.00014778676,0.99588543,0.0001283085,0.0005126451,0.00009364023],"study_design_scores_gemma":[0.0008197556,0.00021105155,0.0028322975,0.000023494418,0.000024172388,0.00009474497,0.0007959182,6.2674866e-7,0.98815995,0.0002510625,0.0066672075,0.00011969407],"about_ca_topic_score_codex":0.0002449048,"about_ca_topic_score_gemma":0.00016707496,"teacher_disagreement_score":0.0077254716,"about_ca_system_score_codex":0.000019333695,"about_ca_system_score_gemma":0.00006386244,"threshold_uncertainty_score":0.35612497},"labels":[],"label_agreement":null},{"id":"W2047217698","doi":"10.1111/j.1574-6968.2009.01612.x","title":"Application of an immunoaffinity-based preconcentration method for mass spectrometric analysis of the O-chain polysaccharide of<i>Aeromonas salmonicida</i>from<i>in vitro</i>- and<i>in vivo</i>-grown cells","year":2009,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Aquaculture disease management and microbiota","field":"Immunology and Microbiology","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University; Institute for Marine Biosciences; Institute for Biological Sciences","funders":"","keywords":"Aeromonas salmonicida; Polyclonal antibodies; In vivo; Lipopolysaccharide; Polysaccharide; In vitro; Chemistry; Antiserum; Microbiology; Capillary electrophoresis; Chromatography; Biochemistry; Bacteria; Molecular biology; Biology; Antibody; Immunology","score_opus":0.0051387676117904905,"score_gpt":0.22587619769363856,"score_spread":0.22073743008184807,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2047217698","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9807572,0.0007807256,0.016017936,0.000580531,0.00014253196,0.000920011,0.00077317044,0.00001585118,0.000012038148],"genre_scores_gemma":[0.99369323,0.0000207372,0.004685288,0.00080374035,0.0000105574145,0.000030147874,0.0007260555,0.000012485613,0.00001775416],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9978933,0.00044920537,0.00076529355,0.00050207967,0.00002734125,0.00036280576],"domain_scores_gemma":[0.99851155,0.000301426,0.0006394752,0.00047705727,0.00005328738,0.000017182814],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00054821384,0.00025510442,0.0007669764,0.00072715915,0.000052641022,0.000006002473,0.00043557343,0.00026481372,0.000029173641],"category_scores_gemma":[0.00003023133,0.00021351063,0.0003016083,0.0012351259,0.00022992658,0.00007299251,0.000040987772,0.00020227532,0.0000013209059],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0007097862,0.00028550052,0.0022064382,0.000024447232,0.00044854902,5.9032044e-7,0.00027276255,0.00073587795,0.99422586,0.000076321994,0.000090674905,0.00092317397],"study_design_scores_gemma":[0.0017654378,0.00011759907,0.016322544,0.000020504895,0.0006198662,0.0000012174995,0.000093328774,0.00041667724,0.9801662,0.000055135268,0.00023042868,0.00019106078],"about_ca_topic_score_codex":0.00056069886,"about_ca_topic_score_gemma":0.00018895349,"teacher_disagreement_score":0.014116106,"about_ca_system_score_codex":0.00007122987,"about_ca_system_score_gemma":0.00003524786,"threshold_uncertainty_score":0.8706711},"labels":[],"label_agreement":null},{"id":"W2047462163","doi":"10.1111/j.1574-6968.2000.tb09234.x","title":"Antibiotic production in relation to bacterial growth and nematode development in<i>PhotorhabdusâHeterorhabditis</i>infected<i>Galleria mellonella</i>larvae","year":2000,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Entomopathogenic Microorganisms in Pest Control","field":"Agricultural and Biological Sciences","cited_by":89,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Simon Fraser University","funders":"Natural Sciences and Engineering Research Council of Canada; Directorate for Biological Sciences","keywords":"Galleria mellonella; Photorhabdus luminescens; Biology; Photorhabdus; Heterorhabditis; Microbiology; Heterorhabditis bacteriophora; Nematode; Entomopathogenic nematode; Xenorhabdus; Larva; Population; Antibiotics; Biological pest control; Ecology; Virulence","score_opus":0.0056480780576520315,"score_gpt":0.1770551374722506,"score_spread":0.17140705941459858,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2047462163","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9960684,0.00006935145,0.000002901542,0.0026739738,0.00043266296,0.0006313593,0.000014995897,0.000060584498,0.000045736022],"genre_scores_gemma":[0.9976445,0.000060035854,0.00044331525,0.0014242666,0.00017372139,0.000022161466,0.00017736269,0.000004181999,0.000050460887],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9980698,0.00021617374,0.0004607504,0.00066059054,0.000056980534,0.0005356798],"domain_scores_gemma":[0.99967223,0.00006877426,0.000082133134,0.000081527454,0.00001978094,0.000075538934],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00033932657,0.00024961904,0.00031352436,0.00007111611,0.000105364066,0.0000437842,0.00019826739,0.00020239643,0.0003351611],"category_scores_gemma":[0.000054744625,0.00014205536,0.00003838679,0.00035377988,0.00008343942,0.00013638464,0.00006588714,0.0002258378,0.00012221212],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008518115,0.00006559408,0.026058737,0.0000069047423,0.000009652761,0.000016173411,0.00031830338,0.000017584485,0.96738106,0.0000032850676,0.0002258056,0.005811726],"study_design_scores_gemma":[0.0007788184,0.00013075715,0.5740422,0.00010967055,0.000009567095,0.00017393807,0.000029553628,0.000003295655,0.41892868,0.000022273036,0.005257742,0.00051348336],"about_ca_topic_score_codex":0.00025063468,"about_ca_topic_score_gemma":0.0019221137,"teacher_disagreement_score":0.5484524,"about_ca_system_score_codex":0.00010271342,"about_ca_system_score_gemma":0.000014263296,"threshold_uncertainty_score":0.57928497},"labels":[],"label_agreement":null},{"id":"W2048104500","doi":"10.1111/j.1574-6968.2006.00428.x","title":"Molecular serotype identification of<i>Streptococcus agalactiae</i>of bovine origin by multiplex PCR-based reverse line blot (mPCR/RLB) hybridization assay","year":2006,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Neonatal and Maternal Infections","field":"Medicine","cited_by":22,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal","funders":"","keywords":"Streptococcus agalactiae; Serotype; Biology; Multiplex polymerase chain reaction; Microbiology; Multiplex; Streptococcus; Polymerase chain reaction; Molecular biology; Virology; Gene; Genetics; Bacteria","score_opus":0.007753081534057714,"score_gpt":0.23632261724472042,"score_spread":0.2285695357106627,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2048104500","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9738746,0.00015506269,0.022224093,0.0024411366,0.00037060207,0.00052363676,0.00029081551,0.00006833602,0.000051707968],"genre_scores_gemma":[0.99555755,0.000008979441,0.00058191817,0.0012297116,0.00008268,0.000028689174,0.0020004876,0.000027124266,0.00048286244],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9986942,0.00011726775,0.00059295323,0.00030706238,0.00007526269,0.00021325864],"domain_scores_gemma":[0.9990124,0.000066405526,0.00040940853,0.00030667335,0.00015970666,0.00004539285],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00025069615,0.0001853016,0.0003280092,0.00016623295,0.00004434792,0.0000065545623,0.00009437298,0.00012430984,0.00007195455],"category_scores_gemma":[0.000066527224,0.00017316738,0.00013246357,0.0002376732,0.00018237109,0.000059890193,0.00002364371,0.00016148498,0.000045565197],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014732756,0.00023842008,0.014606274,0.000095594005,0.000065858374,0.000019169185,0.000008673881,0.0005822651,0.9695732,0.000027990964,0.014438239,0.00019700162],"study_design_scores_gemma":[0.0013536208,0.00015621283,0.0043417807,0.00006397099,0.000116803334,0.00004805549,0.000003529395,0.00019700897,0.9752891,0.000008573617,0.01827417,0.00014715544],"about_ca_topic_score_codex":0.0010919146,"about_ca_topic_score_gemma":0.000026359583,"teacher_disagreement_score":0.021682939,"about_ca_system_score_codex":0.00006302997,"about_ca_system_score_gemma":0.000044358814,"threshold_uncertainty_score":0.7061561},"labels":[],"label_agreement":null},{"id":"W2049364433","doi":"10.1111/j.1574-6968.2002.tb11212.x","title":"A molecular approach for early monitoring of decay basidiomycetes in wood chips","year":2002,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Mycorrhizal Fungi and Plant Interactions","field":"Agricultural and Biological Sciences","cited_by":41,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Restriction fragment length polymorphism; Biology; Spacer DNA; Ribosomal DNA; Primer (cosmetics); Basidiomycota; Dead wood; Terminal restriction fragment length polymorphism; DNA; Polymerase chain reaction; Botany; Genetics; Gene; Phylogenetics; Chemistry; Ecology","score_opus":0.017216930611885613,"score_gpt":0.19393364954840217,"score_spread":0.17671671893651655,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2049364433","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9977592,0.00040209552,0.0000614694,0.00060563366,0.00020826767,0.000227172,0.00037008533,0.00002023395,0.00034584728],"genre_scores_gemma":[0.9983078,0.000048497208,0.00094755925,0.00022998617,0.000112649686,0.00003761805,0.00028040123,0.0000012149291,0.000034256493],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99924004,0.000060018752,0.00019470355,0.00022041705,0.00002510171,0.0002597401],"domain_scores_gemma":[0.9994263,0.00040915693,0.000069043774,0.00004630738,0.000017935834,0.00003125715],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00008983749,0.00011195628,0.00017961959,0.000030362315,0.000051447296,0.000011469982,0.00017660199,0.0000990363,0.00018556477],"category_scores_gemma":[0.000029216759,0.000051690833,0.00010126536,0.00015991079,0.000015282114,0.000047022804,0.00002276252,0.0001190142,0.00003073464],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000017425082,0.000050827784,0.084548466,0.000005345516,0.000014792592,0.0000026218008,0.00007214406,0.000023283766,0.9130801,0.0000342142,0.0011725164,0.0009782941],"study_design_scores_gemma":[0.00046079498,0.00052751927,0.03859395,0.00013318798,0.000040793293,0.00015390104,0.00028798787,0.00024284696,0.9410911,0.000057351044,0.017752083,0.0006584408],"about_ca_topic_score_codex":0.00018272073,"about_ca_topic_score_gemma":0.000008222504,"teacher_disagreement_score":0.04595451,"about_ca_system_score_codex":0.000012828888,"about_ca_system_score_gemma":9.787647e-7,"threshold_uncertainty_score":0.2107891},"labels":[],"label_agreement":null},{"id":"W2049647012","doi":"10.1111/1574-6968.12106","title":"<i>Bacillus weihenstephanensis</i>characteristics are present in<i>Bacillus cereus</i>and<i>Bacillus mycoides</i>strains","year":2013,"lang":"en","type":"letter","venue":"FEMS Microbiology Letters","topic":"Bacillus and Francisella bacterial research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":22,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Agriculture and Agri-Food Canada; Université du Québec à Trois-Rivières","funders":"","keywords":"Bacillus cereus; Bacillus anthracis; Bacillus thuringiensis; Biology; Cereus; Microbiology; Bacillus (shape); Bacteria; Genetics","score_opus":0.012280919301864895,"score_gpt":0.22030413944027227,"score_spread":0.20802322013840738,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2049647012","genre_codex":"empirical","genre_gemma":"commentary","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"commentary","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.7565984,0.0038756586,0.00014769487,0.22817722,0.0037662287,0.0024500727,0.00413824,0.00011978811,0.00072666735],"genre_scores_gemma":[0.17470072,0.0050117346,0.00060580525,0.7752842,0.01587247,0.00064746354,0.018570818,0.00070163223,0.008605199],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.99231464,0.00076056423,0.0014542957,0.0025555517,0.0003638446,0.002551132],"domain_scores_gemma":[0.99653834,0.00015373669,0.0008067584,0.0017962622,0.00034900632,0.00035588842],"candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":["metaepi_narrow","research_integrity"],"category_scores_codex":[0.00059113535,0.0016005639,0.0018102555,0.0005038856,0.00028937648,0.0002613522,0.0013296371,0.003597192,0.00030969863],"category_scores_gemma":[0.0002513192,0.001551038,0.00053122523,0.00031535415,0.0014689894,0.000026423828,0.0011461921,0.003232194,0.00046754014],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000090487054,0.000052648276,0.0006730328,0.00019849496,0.00022913494,0.00051406724,0.00006931996,0.0000038966805,0.51534563,0.000001939379,0.4809656,0.0018557481],"study_design_scores_gemma":[0.0019108042,0.0003285558,0.0019722895,0.00019676112,0.00008579641,0.0006825415,0.00003783294,0.000010194109,0.00931531,0.000014588381,0.98372287,0.0017224426],"about_ca_topic_score_codex":0.00031799058,"about_ca_topic_score_gemma":0.00015473724,"teacher_disagreement_score":0.5818977,"about_ca_system_score_codex":0.00023005325,"about_ca_system_score_gemma":0.00025703615,"threshold_uncertainty_score":0.9996742},"labels":[],"label_agreement":null},{"id":"W2051561730","doi":"10.1111/j.1574-6968.2001.tb10515.x","title":"Phylogenetic relationship of<i>Ophiostoma piliferum</i>to other sapstain fungi based on the nuclear rRNA gene","year":2001,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Plant Pathogens and Fungal Diseases","field":"Biochemistry, Genetics and Molecular Biology","cited_by":30,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"Ophiostoma; Biology; Internal transcribed spacer; Phylogenetic tree; HaeIII; Ribosomal RNA; Genetics; Gene; Phylogenetics; Spacer DNA; Restriction fragment length polymorphism; Botany; Polymerase chain reaction; Fungus","score_opus":0.010510421448037077,"score_gpt":0.20331270655243847,"score_spread":0.1928022851044014,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2051561730","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99526256,0.0002772858,0.00047125554,0.002630702,0.00012196247,0.00027052502,0.0006557637,0.000015894098,0.0002940537],"genre_scores_gemma":[0.9746435,0.000019948335,0.00033462705,0.02448413,0.00014845651,0.000017464592,0.00022841591,0.000033167198,0.00009026634],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99885,0.00019224691,0.0002150952,0.00037129928,0.000051798026,0.00031954295],"domain_scores_gemma":[0.9992229,0.00008316152,0.00008830664,0.0004921907,0.000034324432,0.00007913902],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00017243608,0.0001992312,0.00016459385,0.000080201506,0.00011898052,0.000010550632,0.00029757348,0.00014923511,0.000066475535],"category_scores_gemma":[0.00009086738,0.00015276043,0.00014064468,0.00013874685,0.00014255606,0.0000015199757,0.000060608818,0.00010760656,0.0001151758],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00024188476,0.00006067555,0.038715433,0.0000044330604,0.00003832606,0.000012567844,0.000015767748,0.0012353202,0.949386,0.00004918579,0.010134138,0.00010625883],"study_design_scores_gemma":[0.0017166918,0.0013712209,0.36259654,0.00008719524,0.00013948609,0.0001990188,0.000078996294,0.000265766,0.400557,0.000034841883,0.23184389,0.0011093515],"about_ca_topic_score_codex":0.000009544797,"about_ca_topic_score_gemma":0.0000129138,"teacher_disagreement_score":0.548829,"about_ca_system_score_codex":0.000013916933,"about_ca_system_score_gemma":0.00002939201,"threshold_uncertainty_score":0.62293893},"labels":[],"label_agreement":null},{"id":"W2053657698","doi":"10.1111/j.1574-6968.2005.00090.x","title":"Diversity of soluble methane monooxygenase-containing methanotrophs isolated from polluted environments","year":2006,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Microbial metabolism and enzyme function","field":"Biochemistry, Genetics and Molecular Biology","cited_by":78,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Biotechnology Research Institute","funders":"Natural Environment Research Council","keywords":"Methane monooxygenase; Methanotroph; Bacteria; Biology; Gene; Microbiology; Ammonia monooxygenase; 16S ribosomal RNA; Monooxygenase; Biochemistry; Phylogenetic tree; Genetic diversity; Enzyme; Genetics; Chemistry; Anaerobic oxidation of methane; Archaea","score_opus":0.006654443839411207,"score_gpt":0.18205207278732155,"score_spread":0.17539762894791033,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2053657698","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98948205,0.00087946974,0.008246365,0.00020005899,0.0006759585,0.00015229487,0.0003112894,0.000016996373,0.000035503122],"genre_scores_gemma":[0.99530184,0.00004418498,0.0011645004,0.0011148874,0.00027158143,0.000004810926,0.0016710688,0.00002380142,0.00040334935],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9986743,0.00015946971,0.0003028114,0.0004647234,0.000044932494,0.0003538159],"domain_scores_gemma":[0.99937695,0.000017054164,0.00020315887,0.00033869705,0.000018423796,0.000045687644],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013687894,0.00022627435,0.00030745685,0.00007597011,0.00016895954,0.0000041205853,0.0002461901,0.00027666052,0.00010234115],"category_scores_gemma":[0.000015446627,0.00023046651,0.00014899901,0.00008524446,0.00016081183,0.000007789395,0.0004669629,0.00012491952,0.00003809894],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00035670117,0.000056481957,0.0033793044,0.0000031542875,0.00016073945,0.00000446203,0.0000610315,0.00019852766,0.9829601,0.0000032446794,0.0127128335,0.000103390266],"study_design_scores_gemma":[0.0012398436,0.00013847768,0.0067479312,0.000006853121,0.00008343404,0.000010496799,0.00002303741,0.000009119884,0.95388716,0.00001419602,0.037586767,0.00025265882],"about_ca_topic_score_codex":0.0023712965,"about_ca_topic_score_gemma":0.000096911215,"teacher_disagreement_score":0.029072946,"about_ca_system_score_codex":0.000023448114,"about_ca_system_score_gemma":0.00001588019,"threshold_uncertainty_score":0.93981516},"labels":[],"label_agreement":null},{"id":"W2055466479","doi":"10.1111/j.1574-6968.1997.tb12761.x","title":"Cloning and characterization of the lytB gene of Campylobacter jejuni","year":2006,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Salmonella and Campylobacter epidemiology","field":"Agricultural and Biological Sciences","cited_by":10,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Victoria","funders":"","keywords":"Campylobacter jejuni; Biology; Gene; Mutant; Escherichia coli; Cloning (programming); Molecular biology; Genetics; Ribosomal protein; Molecular cloning; Microbiology; Bacteria; Peptide sequence; RNA; Ribosome","score_opus":0.0072663898334065415,"score_gpt":0.17114055282772433,"score_spread":0.16387416299431778,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2055466479","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9968121,0.000065557375,0.0000075129087,0.0026504504,0.00020068511,0.000114853356,0.00009176149,0.000012420133,0.000044630728],"genre_scores_gemma":[0.9982597,0.000016066268,0.000044209904,0.001291522,0.00013352661,0.000003212487,0.00019919788,9.933738e-7,0.000051533967],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9991077,0.00016537492,0.0002997995,0.00020075338,0.000026193506,0.00020015983],"domain_scores_gemma":[0.9995102,0.00011713078,0.00025439414,0.00007111772,0.000029846937,0.000017293927],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015634413,0.000111479814,0.00023525338,0.000011675795,0.00006715864,0.000004684982,0.00018233809,0.00012103184,0.00005179277],"category_scores_gemma":[0.000013441246,0.000040102197,0.000078586694,0.00013323073,0.00027983473,0.000033466556,0.00008155568,0.00007953397,0.0000027263404],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000010883155,0.000018637913,0.17097868,0.0000029893713,0.000009075153,3.7133248e-7,0.000019944262,0.000001239175,0.82821023,0.000052319774,0.0001808811,0.0005147646],"study_design_scores_gemma":[0.00008061065,0.00003670079,0.69789094,0.000009182374,0.000009758789,0.000025266465,0.00000813953,0.000001663766,0.29889533,0.0000326116,0.0029416066,0.00006817655],"about_ca_topic_score_codex":0.00030766058,"about_ca_topic_score_gemma":0.00007989725,"teacher_disagreement_score":0.5293149,"about_ca_system_score_codex":0.000008853802,"about_ca_system_score_gemma":0.0000031082022,"threshold_uncertainty_score":0.163532},"labels":[],"label_agreement":null},{"id":"W2056571363","doi":"10.1111/j.1574-6968.2007.01026.x","title":"Effect of low temperature on stability of θ-type plasmids in<i>Carnobacterium maltaromaticum</i>","year":2008,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Probiotics and Fermented Foods","field":"Agricultural and Biological Sciences","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta; Agriculture Food and Rural Development","funders":"Natural Sciences and Engineering Research Council of Canada; Rijksuniversiteit Groningen; Oregon State University","keywords":"Plasmid; Chemistry; Biology; Food science; Microbiology; Biochemistry; DNA","score_opus":0.0075699336091533,"score_gpt":0.19116049996924356,"score_spread":0.18359056636009025,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2056571363","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.998745,0.000032624615,6.294438e-8,0.00054576923,0.00023370577,0.00024901744,0.000113801136,0.000015876549,0.00006409726],"genre_scores_gemma":[0.9992776,0.000017681132,0.000019705907,0.00049802783,0.000036406385,0.000003722546,0.00013751129,0.0000012249347,0.000008155329],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9988915,0.00023041952,0.00031380157,0.00025990052,0.000047767997,0.00025666383],"domain_scores_gemma":[0.9994593,0.0002525718,0.0001265545,0.00009579279,0.000030459316,0.000035285128],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002574445,0.00016883374,0.00037817776,0.000023832761,0.000046807003,0.0000031912562,0.00021946944,0.00018864802,0.00008209005],"category_scores_gemma":[0.000041052434,0.00006673863,0.00009907931,0.00025163582,0.0002853361,0.000030855317,0.000052851672,0.00020162239,0.00001036425],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00026188281,0.00010818301,0.04171474,0.00003889598,0.000017019816,0.000006437145,0.000063723666,0.000007841738,0.957236,0.0000037322113,0.00036611853,0.00017542236],"study_design_scores_gemma":[0.0003557663,0.0018264924,0.11651131,0.000060632694,0.0000062225704,0.000020261275,0.000012009608,0.000002784193,0.880877,0.0000020705365,0.00019941805,0.000126022],"about_ca_topic_score_codex":0.000044448334,"about_ca_topic_score_gemma":0.000025955429,"teacher_disagreement_score":0.07635899,"about_ca_system_score_codex":0.000025646248,"about_ca_system_score_gemma":0.0000069300877,"threshold_uncertainty_score":0.27215222},"labels":[],"label_agreement":null},{"id":"W2056576841","doi":"10.1111/j.1574-6968.1997.tb10417.x","title":"Expression and phylogenetic relationships of a novel lacZ homologue from Actinobacillus pleuropneumoniae","year":2006,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Microbial infections and disease research","field":"Immunology and Microbiology","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Actinobacillus pleuropneumoniae; Biology; lac operon; Gene; Escherichia coli; Homology (biology); Beta-galactosidase; Genetics; Virulence; Plasmid; Mutant; Complementation; Peptide sequence; Molecular biology","score_opus":0.021261164787186083,"score_gpt":0.2292390598505403,"score_spread":0.2079778950633542,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2056576841","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99517304,0.0019810423,0.00083347695,0.00054969214,0.00030289337,0.0002496859,0.0007027582,0.000058129874,0.00014926985],"genre_scores_gemma":[0.9980492,0.00004439039,0.00043144237,0.0002496699,0.000057295507,0.000020283625,0.00088161253,0.000022197311,0.00024391977],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99831945,0.0003728364,0.00039419194,0.00047291463,0.000018739578,0.00042187652],"domain_scores_gemma":[0.9990479,0.00034839645,0.00017664174,0.000338376,0.000059443613,0.000029275434],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00017720165,0.00023005044,0.00033983146,0.00021071114,0.0002904398,0.000014475278,0.00018368459,0.00034767707,0.00021245763],"category_scores_gemma":[0.000049183647,0.00020855315,0.00009906255,0.00015983684,0.0007212532,0.000056407833,0.00016692017,0.0004446723,0.00013752948],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000085320586,0.00021264331,0.025263365,0.000010932516,0.00007863226,0.000007974497,0.00007418493,0.00004086247,0.96879756,0.0000785762,0.0052096085,0.00014032704],"study_design_scores_gemma":[0.0028626856,0.000114048074,0.09125131,0.00006251928,0.00008997096,0.0002867647,0.00008450834,0.0000050179874,0.88966745,0.00007235214,0.01511281,0.00039056173],"about_ca_topic_score_codex":0.0011844173,"about_ca_topic_score_gemma":0.00012357677,"teacher_disagreement_score":0.07913013,"about_ca_system_score_codex":0.000034963687,"about_ca_system_score_gemma":0.000038834412,"threshold_uncertainty_score":0.85045505},"labels":[],"label_agreement":null},{"id":"W2057242133","doi":"10.1016/j.femsle.2005.05.022","title":"HP0958 is an essential motility gene in<i>Helicobacter pylori</i>","year":2005,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Helicobacter pylori-related gastroenterology studies","field":"Medicine","cited_by":22,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"Darwin Trust of Edinburgh; Biotechnology and Biological Sciences Research Council; Irish Research Council; Science Foundation Ireland","keywords":"Flagellin; rpoN; Biology; Flagellum; Mutant; Gene; Genetics; Transcription (linguistics); Molecular biology; Gene expression; Cell biology; Microbiology; Promoter","score_opus":0.013446006488834468,"score_gpt":0.247145147468829,"score_spread":0.23369914097999456,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2057242133","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9486219,0.00015980007,0.00012114518,0.049687885,0.0006752867,0.00041105755,0.00008403709,0.00014281405,0.00009605526],"genre_scores_gemma":[0.9243654,0.000055760294,0.001413022,0.072913565,0.00074236834,0.000035026413,0.00028428793,0.00004795396,0.000142603],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99719864,0.00020413581,0.00065876497,0.00087325374,0.00008435666,0.0009808509],"domain_scores_gemma":[0.9988358,0.000043785247,0.0001410853,0.0006920359,0.00009558903,0.00019169557],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0002980584,0.0004254817,0.00070294604,0.00027666416,0.000105237494,0.000016222948,0.00026802163,0.0003888812,0.00027680423],"category_scores_gemma":[0.0000391927,0.0003966924,0.00016469228,0.00023795721,0.0005545466,0.00020186066,0.00015832976,0.00078672805,0.0005208444],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00026124562,0.00026041555,0.28314912,0.000010532139,0.00025395807,0.00008796592,0.0008093125,0.000008588209,0.70578283,0.0000014435784,0.008447729,0.0009268712],"study_design_scores_gemma":[0.0074313954,0.00067455636,0.7963289,0.00006589656,0.00027557657,0.0011810813,0.00010341217,0.000053142543,0.13142033,0.0000056927543,0.061910342,0.00054967543],"about_ca_topic_score_codex":0.00010848402,"about_ca_topic_score_gemma":0.00022712842,"teacher_disagreement_score":0.57436246,"about_ca_system_score_codex":0.0002305363,"about_ca_system_score_gemma":0.000045063472,"threshold_uncertainty_score":0.9998485},"labels":[],"label_agreement":null},{"id":"W2057301130","doi":"10.1111/j.1574-6968.2002.tb11150.x","title":"Detection of methanotrophs with highly divergent<i>pmoA</i>genes from Arctic soils","year":2002,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Microbial metabolism and enzyme function","field":"Biochemistry, Genetics and Molecular Biology","cited_by":58,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Biotechnology Research Institute","funders":"","keywords":"Soil water; Arctic; Environmental chemistry; Environmental science; Chemistry; Biology; Ecology","score_opus":0.007079189666339546,"score_gpt":0.17230783938570168,"score_spread":0.16522864971936213,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2057301130","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9917052,0.002671587,0.004131956,0.00032435625,0.0008125301,0.00014586053,0.00016228209,0.000020158392,0.000026102976],"genre_scores_gemma":[0.9966208,0.00037588598,0.0007714842,0.0013209158,0.0004000646,0.000014442291,0.00027592477,0.000027779262,0.00019272162],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9988662,0.00012076145,0.00024100485,0.00043893527,0.00004331926,0.00028980817],"domain_scores_gemma":[0.9993583,0.000015357195,0.00016264818,0.00035232838,0.000060328126,0.00005106842],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00006963628,0.00021746794,0.00025125113,0.00007081673,0.000085277374,0.0000069608323,0.00017472407,0.00019842728,0.00012760906],"category_scores_gemma":[0.000020171965,0.00018494345,0.00010876234,0.00012140169,0.00018770338,0.000006907948,0.00007030119,0.00010917153,0.000062898274],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015894027,0.000047248945,0.0011100717,0.000011160441,0.00016323863,0.0000029946082,0.000047559937,0.00008611382,0.991923,0.0000019340284,0.004780047,0.0016677107],"study_design_scores_gemma":[0.00073741184,0.00021813429,0.0013283408,0.000012391263,0.00008090883,0.000032870415,0.000014707263,0.0000053978542,0.95073205,0.0000037337625,0.046613608,0.00022044679],"about_ca_topic_score_codex":0.0003198105,"about_ca_topic_score_gemma":0.000103461905,"teacher_disagreement_score":0.041833557,"about_ca_system_score_codex":0.000015175835,"about_ca_system_score_gemma":0.000007848364,"threshold_uncertainty_score":0.7541775},"labels":[],"label_agreement":null},{"id":"W2058068864","doi":"10.1016/s0378-1097(03)00164-2","title":"Acid tolerance response of biofilm cells of<i>Streptococcus mutans</i>","year":2003,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Oral microbiology and periodontitis research","field":"Dentistry","cited_by":82,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba","funders":"Canadian Institutes of Health Research","keywords":"Biofilm; Streptococcus mutans; Chemostat; Microbiology; Dental plaque; Incubation; Bacteria; Streptococcaceae; Biology; Streptococcus; Multidrug tolerance; Chemistry; Antibiotics; Biochemistry","score_opus":0.01208626800227227,"score_gpt":0.2552294410830923,"score_spread":0.24314317308082004,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2058068864","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99642766,0.00069012406,0.00013549993,0.0002968853,0.0011079205,0.00032263968,0.00069244497,0.00003284009,0.00029398323],"genre_scores_gemma":[0.9973941,0.000023104125,0.00073180714,0.000923767,0.000036540194,0.000016738133,0.000073352436,0.000025348007,0.00077525177],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99733937,0.001007902,0.00058069476,0.00046240972,0.00005586365,0.00055376114],"domain_scores_gemma":[0.99871284,0.00026019168,0.00025962124,0.00057455106,0.00012668969,0.000066114604],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0007048584,0.00024969497,0.00056456873,0.00019743016,0.0000862637,0.000010296243,0.00045194622,0.00037433868,0.0014664354],"category_scores_gemma":[0.00015896116,0.0002362952,0.00020374621,0.0003717118,0.0009809847,0.000068113346,0.00007868997,0.00037843155,0.0004635503],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006489541,0.00008291083,0.026864259,0.00004224411,0.000086626125,0.000089071,0.000121239005,0.000013781843,0.94996727,0.00005235342,0.021953948,0.00007735171],"study_design_scores_gemma":[0.000944399,0.0001523278,0.0052653085,0.000038060953,0.000015210454,0.00020209682,0.00004018745,5.2498314e-7,0.94772947,0.0000062338813,0.045395836,0.00021036515],"about_ca_topic_score_codex":0.000055348377,"about_ca_topic_score_gemma":0.000038910508,"teacher_disagreement_score":0.023441887,"about_ca_system_score_codex":0.000038256992,"about_ca_system_score_gemma":0.00010004653,"threshold_uncertainty_score":0.99944633},"labels":[],"label_agreement":null},{"id":"W2058090291","doi":"10.1111/j.1574-6968.2002.tb11158.x","title":"PCR cloning of polyhydroxyalkanoate biosynthesis genes from<i>Burkholderia caryophylli</i>and their functional expression in recombinant<i>Escherichia coli</i>","year":2002,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"biodegradable polymer synthesis and properties","field":"Materials Science","cited_by":30,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Chinese Academy of Sciences; Tsinghua University; National Natural Science Foundation of China; Public Health Agency of Canada","keywords":"Polyhydroxyalkanoates; Burkholderia; Escherichia coli; Cloning (programming); Pseudomonas; Biology; Gene; Microbiology; Recombinant DNA; Polyhydroxybutyrate; ATP synthase; Open reading frame; Biochemistry; Bacteria; Molecular biology; Chemistry; Genetics; Peptide sequence","score_opus":0.021167974513279432,"score_gpt":0.17978279888793805,"score_spread":0.15861482437465863,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2058090291","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9768606,0.020043029,0.000091477756,0.0016821394,0.0009670816,0.00012591516,0.0001315019,0.00004358438,0.000054694177],"genre_scores_gemma":[0.9969698,0.00042876505,0.0010549963,0.0012911588,0.00009268816,0.000026972859,0.000020114703,0.000028311128,0.00008720001],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99815905,0.0003265333,0.0004798608,0.0005360885,0.000058057958,0.0004403886],"domain_scores_gemma":[0.99913543,0.00025088203,0.0002191821,0.00031233364,0.000020643267,0.000061518615],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00026934373,0.0003032647,0.00051102194,0.00012820368,0.00016912082,0.0000388937,0.00027208668,0.00020372627,0.00068750855],"category_scores_gemma":[0.000023176257,0.00022279756,0.00009228106,0.00013526843,0.00039599932,0.00014669346,0.0001304155,0.00016007322,0.00006702798],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008877651,0.00006308006,0.0021774503,0.000018071178,0.000020596593,0.0000039601887,0.00070202484,0.000004972513,0.9930946,0.0000026877037,0.0015447591,0.0022790045],"study_design_scores_gemma":[0.0003831818,0.000045663495,0.0016029058,0.00012607758,0.00001359241,0.000011702548,0.000112079,0.0000667954,0.9933124,0.000017717828,0.004031618,0.00027626587],"about_ca_topic_score_codex":0.00077178737,"about_ca_topic_score_gemma":0.000049047576,"teacher_disagreement_score":0.020109216,"about_ca_system_score_codex":0.000029082565,"about_ca_system_score_gemma":0.000013427367,"threshold_uncertainty_score":0.9085421},"labels":[],"label_agreement":null},{"id":"W2058935505","doi":"10.1111/j.1574-6968.2007.00672.x","title":"<i>ampC</i>gene expression in promoter mutants of cefoxitin-resistant<i>Escherichia coli</i>clinical isolates","year":2007,"lang":"he","type":"article","venue":"FEMS Microbiology Letters","topic":"Antibiotic Resistance in Bacteria","field":"Biochemistry, Genetics and Molecular Biology","cited_by":83,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Sunnybrook Health Science Centre; Health Sciences Centre; Mount Sinai Hospital; Vancouver General Hospital; Public Health Agency of Canada","funders":"","keywords":"Cefoxitin; Attenuator (electronics); Escherichia coli; Biology; Promoter; Gene; Mutant; Microbiology; Polymerase chain reaction; Point mutation; Molecular biology; Gene expression; Genetics; Bacteria; Staphylococcus aureus","score_opus":0.0116625774343586,"score_gpt":0.26652401730557185,"score_spread":0.25486143987121324,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2058935505","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99263406,0.001968259,0.0015820041,0.000837986,0.001691999,0.0007412978,0.00032798303,0.000020973772,0.00019542601],"genre_scores_gemma":[0.9889106,0.0005444663,0.006666429,0.0024921526,0.0005860952,0.0000056026606,0.00044130467,0.00009819549,0.0002551578],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9944841,0.00065550214,0.002109545,0.0013489693,0.000110258865,0.0012915774],"domain_scores_gemma":[0.99748415,0.00020110977,0.0009340734,0.0010344203,0.00014152098,0.0002046984],"candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.0017816824,0.00067942415,0.0010870359,0.00018374964,0.00010669248,0.000032250075,0.0007978744,0.0013691183,0.00013521896],"category_scores_gemma":[0.0002376877,0.00065706053,0.00039544454,0.0003138766,0.00176896,0.000015139161,0.00040550754,0.00067617215,0.00006729296],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0020243211,0.00043474822,0.0773498,0.000121794605,0.0001759135,0.00011026226,0.00015091282,0.0000042976835,0.91521454,0.000003953712,0.004117861,0.00029159288],"study_design_scores_gemma":[0.0020952933,0.0005624157,0.059412643,0.00036054893,0.000055787623,0.000042345448,0.00015461197,0.0000028782244,0.9230235,0.000006603777,0.013618251,0.0006651119],"about_ca_topic_score_codex":0.000065781715,"about_ca_topic_score_gemma":0.00023210768,"teacher_disagreement_score":0.01793716,"about_ca_system_score_codex":0.00008424165,"about_ca_system_score_gemma":0.0001840987,"threshold_uncertainty_score":0.99992734},"labels":[],"label_agreement":null},{"id":"W2060832873","doi":"10.1016/s0378-1097(03)00504-4","title":"The putative anti-anti-sigma factor BldG is post-translationally modified by phosphorylation in<i>Streptomyces coelicolor</i>","year":2003,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Bacterial Genetics and Biotechnology","field":"Biochemistry, Genetics and Molecular Biology","cited_by":16,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"Streptomyces coelicolor; Phosphorylation; Serine; Biochemistry; Streptomycetaceae; Mutant; Bacillus subtilis; Streptomyces; Sigma factor; Chemistry; Biology; Actinomycetales; Gene; Genetics; Bacteria; Gene expression; Promoter","score_opus":0.005764967968748743,"score_gpt":0.21067073396181293,"score_spread":0.2049057659930642,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2060832873","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99143845,0.0011620393,0.00057379366,0.0055039492,0.00043618513,0.00036934816,0.00042451857,0.00001949656,0.00007221887],"genre_scores_gemma":[0.99418944,0.0004244927,0.00023744353,0.004168075,0.000057485264,0.0000289799,0.00077449915,0.000026859117,0.000092695824],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9983451,0.00017776011,0.00037730305,0.0005702536,0.000054895278,0.00047468927],"domain_scores_gemma":[0.99931884,0.000048967304,0.00017483957,0.00032360404,0.00008727623,0.000046473167],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00018015617,0.00027940617,0.000244262,0.00006163887,0.00018632441,0.000042418644,0.00031542857,0.00051280775,0.000030732775],"category_scores_gemma":[0.000051927065,0.00022430712,0.000111435504,0.00013956545,0.00040242862,0.000006147597,0.000046200512,0.00022817591,0.000019440187],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000058839745,0.00004737031,0.0050553274,0.0000032807775,0.00008597598,0.000002244424,0.00008952378,0.00004909495,0.9902264,0.00005937347,0.003579645,0.0007429633],"study_design_scores_gemma":[0.00074035523,0.00015868517,0.006864019,0.000004720154,0.000011878321,0.000022363898,0.000044034507,0.000008687299,0.9001396,0.000034918354,0.091689646,0.0002811324],"about_ca_topic_score_codex":0.000037052054,"about_ca_topic_score_gemma":0.00005417645,"teacher_disagreement_score":0.0900868,"about_ca_system_score_codex":0.000024687952,"about_ca_system_score_gemma":0.00007209857,"threshold_uncertainty_score":0.9146979},"labels":[],"label_agreement":null},{"id":"W2060841375","doi":"10.1111/j.1574-6968.1997.tb10349.x","title":"Identification of Saccharomyces cerevisiae GLY1 as a threonine aldolase: a key enzyme in glycine biosynthesis","year":2006,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Amino Acid Enzymes and Metabolism","field":"Biochemistry, Genetics and Molecular Biology","cited_by":75,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Amgen (Canada)","funders":"","keywords":"Auxotrophy; Biochemistry; Glycine; Biosynthesis; Glyoxylate cycle; Aldolase A; Serine hydroxymethyltransferase; Serine; Saccharomyces cerevisiae; Enzyme; Biology; Threonine; Yeast; Amino acid; Mutant; Gene","score_opus":0.003421487047361921,"score_gpt":0.20647456976196274,"score_spread":0.20305308271460082,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2060841375","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99408287,0.003339225,0.0003890382,0.001520854,0.00021339787,0.00021844594,0.000083790444,0.00001374025,0.00013863979],"genre_scores_gemma":[0.9973437,0.00021982667,0.00040812287,0.00093675917,0.0002573854,0.000023366913,0.00039266932,0.00002558561,0.0003925502],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9985226,0.00010295963,0.00052325777,0.0004634853,0.00004777014,0.00033993315],"domain_scores_gemma":[0.999239,0.000021572341,0.0002560233,0.00040419455,0.000044486118,0.000034668246],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00023682289,0.00022468387,0.00032838422,0.00014148212,0.000040298582,0.000011886932,0.00027097797,0.00021983049,0.00005450513],"category_scores_gemma":[0.000050553925,0.00020960481,0.00012861578,0.00016348694,0.00020028652,0.000007174729,0.000086060296,0.000103690596,0.000035643458],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008069415,0.0000760029,0.002604585,0.000019361345,0.00003987226,0.00000628952,0.0000327617,0.00007430368,0.9891676,0.00015309516,0.0073284674,0.00041701493],"study_design_scores_gemma":[0.00069944205,0.000070438124,0.009081902,0.000022245275,0.000028510114,0.000059780774,0.000028694085,0.0000065719596,0.9459612,0.000024631074,0.043797903,0.00021868621],"about_ca_topic_score_codex":0.00035508044,"about_ca_topic_score_gemma":0.00012957511,"teacher_disagreement_score":0.043206356,"about_ca_system_score_codex":0.000017714909,"about_ca_system_score_gemma":0.00003781094,"threshold_uncertainty_score":0.8547436},"labels":[],"label_agreement":null},{"id":"W2061662945","doi":"10.1111/j.1574-6968.1997.tb10249.x","title":"Description of an albumin binding activity for Streptococcus suis serotype 2","year":2006,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Streptococcal Infections and Treatments","field":"Medicine","cited_by":27,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ministère de l'Agriculture, des Pêcheries et de l'Alimentation; Université de Montréal; Institut de Technologie Agroalimentaire; Agriculture and Agri-Food Canada","funders":"","keywords":"Streptococcus suis; Virulence; Microbiology; Serotype; Albumin; Biology; Bovine serum albumin; Streptococcaceae; Biochemistry; Gene","score_opus":0.023053557850436335,"score_gpt":0.2750935102499709,"score_spread":0.2520399523995346,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2061662945","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9973963,0.000014843846,0.00084971776,0.00040031257,0.00023630676,0.0008538303,0.00010527308,0.000049763345,0.000093653354],"genre_scores_gemma":[0.9976897,0.0000010060605,0.0011692924,0.00016000778,0.00012684155,0.000107840926,0.0004657035,0.000016669304,0.00026288812],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9992687,0.000036998168,0.00018104177,0.00025618006,0.000023331917,0.00023373765],"domain_scores_gemma":[0.9995571,0.000046112607,0.00011123459,0.0001989132,0.0000475729,0.00003908251],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00007299303,0.00013648531,0.00025063864,0.00013312166,0.000075783726,0.0000073461156,0.000041570118,0.00012201906,0.000054188953],"category_scores_gemma":[0.000012822907,0.000117878,0.00011747361,0.000109813234,0.00010692647,0.00007754061,0.000013577947,0.00008471205,0.000018191402],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010879803,0.00023743323,0.2497692,0.000017082304,0.00006691825,0.0000045791608,0.000012186933,0.000008850808,0.74732083,0.000012810989,0.0014661241,0.0009752054],"study_design_scores_gemma":[0.0024393192,0.0006875268,0.3482031,0.00003907027,0.00013772101,0.000060827664,0.000016636428,0.00003232159,0.6458871,0.000022403232,0.002332057,0.00014193448],"about_ca_topic_score_codex":0.0005226455,"about_ca_topic_score_gemma":0.00010570286,"teacher_disagreement_score":0.10143373,"about_ca_system_score_codex":0.000094698145,"about_ca_system_score_gemma":0.000021004567,"threshold_uncertainty_score":0.48069254},"labels":[],"label_agreement":null},{"id":"W2061772696","doi":"10.1016/j.femsle.2005.08.018","title":"Peptide pheromone induced cell death of<i>Streptococcus mutans</i>","year":2005,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Oral microbiology and periodontitis research","field":"Dentistry","cited_by":67,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"National Institute of Dental and Craniofacial Research; Canadian Institutes of Health Research; National Institutes of Health","keywords":"Streptococcus mutans; Biofilm; Microbiology; Cell; Signal transduction; Cell division; Cell growth; Programmed cell death; Biology; Pathogenesis; Chemistry; Cell biology; Immunology; Bacteria; Biochemistry; Genetics; Apoptosis","score_opus":0.019788386941940416,"score_gpt":0.2691884633682074,"score_spread":0.249400076426267,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2061772696","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99474657,0.00033482598,0.00008469361,0.0010727942,0.000619028,0.0003692788,0.00029518057,0.00008805804,0.002389597],"genre_scores_gemma":[0.99437517,0.000019565647,0.0009268086,0.0021005985,0.00030888623,0.000028128663,0.0002622472,0.00003952686,0.0019390702],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9977835,0.00030010604,0.00053515367,0.0005752352,0.000062282255,0.00074374286],"domain_scores_gemma":[0.99892426,0.00012438525,0.00020667443,0.0005468034,0.00009536095,0.000102503145],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.0002852763,0.0003157197,0.0005156182,0.00016836467,0.00014684611,0.00002513896,0.00059077743,0.00044747107,0.0017880262],"category_scores_gemma":[0.000036770532,0.00029964736,0.00020390739,0.0002274466,0.00036750283,0.00012950264,0.00019056043,0.0006384153,0.002616356],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007486504,0.00012480382,0.046696264,0.00002305185,0.00008018473,0.000091899055,0.00013607217,0.000014944525,0.92731935,0.000030001287,0.02470923,0.00069932546],"study_design_scores_gemma":[0.0014300176,0.0001454138,0.01895801,0.000028386288,0.00002929506,0.00030747175,0.0000440886,0.000003328005,0.9363899,0.000007136967,0.042284843,0.00037206965],"about_ca_topic_score_codex":0.00025409646,"about_ca_topic_score_gemma":0.00024519124,"teacher_disagreement_score":0.027738255,"about_ca_system_score_codex":0.000085994296,"about_ca_system_score_gemma":0.0000650918,"threshold_uncertainty_score":0.9999456},"labels":[],"label_agreement":null},{"id":"W2062209188","doi":"10.1016/s0378-1097(03)00127-7","title":"Identification and characterization of a diamide sensitive mutant of<i>Mycobacterium smegmatis</i>","year":2003,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Mycobacterium research and diagnosis","field":"Medicine","cited_by":10,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"British Columbia Lung Association","keywords":"Mycobacterium smegmatis; Mutant; Complementation; Biology; Biochemistry; Transposable element; Transposon mutagenesis; Cloning (programming); Mycobacterium tuberculosis; Molecular biology; Chemistry; Gene; Tuberculosis","score_opus":0.00798101504970451,"score_gpt":0.23240502547755623,"score_spread":0.22442401042785173,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2062209188","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99767345,0.000036026482,0.00061666826,0.0009215701,0.00013365933,0.00034749424,0.00019868955,0.00001156663,0.000060844985],"genre_scores_gemma":[0.99846727,0.00015595961,0.00024755433,0.000697922,0.00003101436,0.000013658332,0.00034375789,0.000012642817,0.000030194436],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99897087,0.00015992967,0.00036910383,0.00023269771,0.000056494635,0.00021089929],"domain_scores_gemma":[0.99927294,0.00010364283,0.00021942996,0.00020774655,0.00012367532,0.00007258478],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00025003965,0.00012035744,0.00033597532,0.00015344756,0.000028433056,0.0000072783782,0.000039934384,0.00009462128,0.00005261989],"category_scores_gemma":[0.00016708972,0.000108203094,0.0000602098,0.00014758087,0.00024586482,0.000070980765,0.000023128909,0.00010380963,0.000014152608],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010057362,0.000061835904,0.034133267,0.00011220809,0.00007098397,0.000012881944,0.0002394653,1.093519e-7,0.9646941,0.000062866384,0.00013018805,0.00038151618],"study_design_scores_gemma":[0.0005432751,0.0000949987,0.18124753,0.000071741626,0.000048399725,0.00015901135,0.000029145262,0.0000034113511,0.8170243,0.000004318586,0.00070037134,0.00007352969],"about_ca_topic_score_codex":0.000015408747,"about_ca_topic_score_gemma":0.0000018236261,"teacher_disagreement_score":0.14766984,"about_ca_system_score_codex":0.000026636593,"about_ca_system_score_gemma":0.00004100649,"threshold_uncertainty_score":0.44123942},"labels":[],"label_agreement":null},{"id":"W2063339873","doi":"10.1111/j.1574-6968.2003.tb11502.x","title":"Identification of peptide inhibitors of<i>Pseudomonas aeruginosa</i>exotoxin A function using a yeast two-hybrid approach","year":2003,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Toxin Mechanisms and Immunotoxins","field":"Immunology and Microbiology","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"","keywords":"Peptide; Peptide library; Biochemistry; Maltose-binding protein; Biopanning; Fusion protein; Biology; Pseudomonas exotoxin; Yeast; Function (biology); Two-hybrid screening; Enzyme; Peptide sequence; Chemistry; Gene; Recombinant DNA; Genetics","score_opus":0.01126898051368914,"score_gpt":0.21128729279776415,"score_spread":0.20001831228407502,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2063339873","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97411317,0.0011163378,0.022093134,0.000040446423,0.0017608698,0.0005018117,0.0001605014,0.00005239444,0.0001613201],"genre_scores_gemma":[0.9978669,0.000017231963,0.0011997464,0.0003044685,0.00003937966,0.000027800555,0.00027903824,0.000038520655,0.0002269007],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99744594,0.0005344635,0.00093530666,0.00053877063,0.000036732403,0.00050879543],"domain_scores_gemma":[0.9985344,0.00006214892,0.00072124845,0.0005343795,0.00012270016,0.00002512172],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00063037913,0.00033017865,0.00058264245,0.00031643637,0.00016322709,0.00001061859,0.0002882991,0.00026907952,0.000145258],"category_scores_gemma":[0.00008412449,0.0003226489,0.0002406368,0.00032363142,0.00056508026,0.00012848244,0.0000714332,0.0003755615,0.000094443756],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013246553,0.00021417522,0.0006481596,0.00003798018,0.00029775163,0.0000020177329,0.00022441208,0.0002249001,0.9955851,0.001091756,0.0012867884,0.00025453386],"study_design_scores_gemma":[0.0016483192,0.00012860657,0.00036133308,0.000040642262,0.0001481262,0.0003439352,0.00024562582,0.000011638078,0.9920026,0.00006970483,0.0046984414,0.00030101824],"about_ca_topic_score_codex":0.0001134322,"about_ca_topic_score_gemma":0.0000043152486,"teacher_disagreement_score":0.023753729,"about_ca_system_score_codex":0.00006329574,"about_ca_system_score_gemma":0.000083441744,"threshold_uncertainty_score":0.9999226},"labels":[],"label_agreement":null},{"id":"W2063817763","doi":"10.1111/j.1574-6968.2012.02553.x","title":"Regulatory systems controlling motility and gene transfer agent production and release in Rhodobacter capsulatus","year":2012,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Bacterial Genetics and Biotechnology","field":"Biochemistry, Genetics and Molecular Biology","cited_by":50,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia; Memorial University of Newfoundland","funders":"Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research","keywords":"Caulobacter crescentus; Rhodobacter; Biology; Mutant; Motility; Transcription (linguistics); Cell biology; Transcription factor; Gene; Regulation of gene expression; Biochemistry; Cell cycle","score_opus":0.0070242004593889145,"score_gpt":0.18827908082659334,"score_spread":0.1812548803672044,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2063817763","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99393135,0.0041480334,0.00012039233,0.00065414986,0.00076294167,0.00033366075,0.000031365547,0.0000139012,0.000004215539],"genre_scores_gemma":[0.9985544,0.00032196438,0.00015352812,0.00047379042,0.00034220173,0.000019630193,0.00008640582,0.000017791424,0.00003027943],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9987656,0.000137833,0.00025179618,0.00042716964,0.000023007138,0.0003946345],"domain_scores_gemma":[0.99959224,0.000006556127,0.00004474619,0.00025834687,0.000021589747,0.000076545635],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00031667683,0.00018761429,0.00023191952,0.00006875425,0.000054590146,0.000013817668,0.00007169866,0.00037996031,0.0000026139385],"category_scores_gemma":[0.000028996907,0.0001727003,0.000035676123,0.000046927533,0.00025837732,0.0000046298005,0.000062559855,0.00014727168,0.000002124812],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008983849,0.00003515876,0.030191759,0.000020411117,0.000039520237,0.0000018328816,0.000056461504,0.000023552091,0.96900123,0.00000861844,0.00013237582,0.0003992679],"study_design_scores_gemma":[0.0010006912,0.00013024839,0.1429159,0.000024069099,0.00003715664,0.0003120632,0.00003912676,0.00001562168,0.8466519,0.0000027601402,0.008552219,0.0003182246],"about_ca_topic_score_codex":0.000047153568,"about_ca_topic_score_gemma":0.00002937559,"teacher_disagreement_score":0.12234929,"about_ca_system_score_codex":0.000021188021,"about_ca_system_score_gemma":0.000012027582,"threshold_uncertainty_score":0.70425135},"labels":[],"label_agreement":null},{"id":"W2063867104","doi":"10.1111/j.1574-6968.2007.00978.x","title":"Implication of a regulator of G protein signalling (BbRGS1) in conidiation and conidial thermotolerance of the insect pathogenic fungus<i>Beauveria bassiana</i>","year":2008,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Entomopathogenic Microorganisms in Pest Control","field":"Agricultural and Biological Sciences","cited_by":51,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Brock University","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Conidiation; Biology; Beauveria bassiana; Microbiology; Bassiana; Virulence; Entomopathogenic fungus; Pathogenic fungus; Metarhizium anisopliae; Germ tube; Fungal protein; Gene; Conidium; Genetics; Botany; Spore; Saccharomyces cerevisiae; Biological pest control","score_opus":0.00866714583520517,"score_gpt":0.16768196554273346,"score_spread":0.1590148197075283,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2063867104","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9980734,0.00049942965,0.000016217986,0.0006320558,0.000063697,0.0005868459,0.00011164668,0.000008767349,0.000007937179],"genre_scores_gemma":[0.9995211,0.000033877786,0.000120759156,0.00023531514,0.00003720712,0.000021703972,0.000021350681,0.0000019222175,0.0000067854926],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99881446,0.00023276132,0.0004657277,0.00024618284,0.000057793815,0.00018304642],"domain_scores_gemma":[0.99923456,0.00011750155,0.00046358665,0.00010580088,0.000057674763,0.000020874288],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00028144973,0.00012744252,0.00030364914,0.000021715687,0.00005828883,0.0000027363592,0.000254768,0.00013353415,0.000028547227],"category_scores_gemma":[0.000046054134,0.000057626807,0.00009026791,0.00023991069,0.0003598646,0.000042956086,0.000059294045,0.000112730384,8.4018063e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006251488,0.000037394904,0.0306722,0.000013291015,0.000013808003,9.0308896e-7,0.00021771112,0.000009695022,0.967916,0.000040253453,0.0000196077,0.0009965836],"study_design_scores_gemma":[0.00037690304,0.000083165265,0.27874947,0.000042132204,0.000008390092,0.000024161109,0.000016997838,0.000009918748,0.720491,0.000029013121,0.00008641407,0.00008243166],"about_ca_topic_score_codex":0.00019014708,"about_ca_topic_score_gemma":0.00015645164,"teacher_disagreement_score":0.24807726,"about_ca_system_score_codex":0.000025890557,"about_ca_system_score_gemma":0.000024512754,"threshold_uncertainty_score":0.23499529},"labels":[],"label_agreement":null},{"id":"W2064550566","doi":"10.1111/j.1574-6968.2001.tb10923.x","title":"Effect of environmental and chemotactic stimuli on the activity of the<i>Campylobacter jejuni flaA</i>Ï<sup>28</sup>promoter","year":2001,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Salmonella and Campylobacter epidemiology","field":"Agricultural and Biological Sciences","cited_by":29,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"","keywords":"Campylobacter jejuni; Chemotaxis; Bioreporter; Biology; Microbiology; Osmotic concentration; Biochemistry; Bacteria; Reporter gene; Gene; Gene expression; Receptor; Genetics","score_opus":0.009603702463320499,"score_gpt":0.19795951373105566,"score_spread":0.18835581126773515,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2064550566","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9912604,0.000056269724,7.896321e-7,0.008015495,0.00012138343,0.00035521583,0.00008487734,0.000014204381,0.00009133556],"genre_scores_gemma":[0.9969052,0.000041365507,0.00000430267,0.0028507782,0.000099012446,0.00001024471,0.000022176051,0.0000023786206,0.00006452952],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9981317,0.00083028607,0.00025409175,0.00036723548,0.00006132356,0.00035538786],"domain_scores_gemma":[0.9981374,0.0013993222,0.00022550623,0.0001858207,0.000007161381,0.000044748627],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004984768,0.00024794578,0.00040237923,0.000013031249,0.00013781166,0.0000082311,0.0003776717,0.00018847981,0.00037047494],"category_scores_gemma":[0.000063959924,0.000074920245,0.00019060094,0.00010673644,0.0006902217,0.00004506466,0.00016846074,0.00027602055,0.000030645053],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00019014643,0.000073266965,0.080603085,0.0000058990872,0.000048300735,0.000002234089,0.000062261126,0.000004879844,0.91145825,0.000004736397,0.0006051152,0.0069417977],"study_design_scores_gemma":[0.0005576802,0.0012848546,0.6277357,0.00003785414,0.00007716722,0.00016542576,0.000046559766,0.000025720112,0.36224583,0.000029356132,0.0075156875,0.0002782288],"about_ca_topic_score_codex":0.000078123725,"about_ca_topic_score_gemma":0.000011736797,"teacher_disagreement_score":0.54921246,"about_ca_system_score_codex":0.000027546883,"about_ca_system_score_gemma":0.000002598821,"threshold_uncertainty_score":0.4056441},"labels":[],"label_agreement":null},{"id":"W2065202257","doi":"10.1111/1574-6968.12533","title":"<i>Bacteria</i>associated with arbuscular mycorrhizal fungi within roots of plants growing in a soil highly contaminated with aliphatic and aromatic petroleum hydrocarbons","year":2014,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Mycorrhizal Fungi and Plant Interactions","field":"Agricultural and Biological Sciences","cited_by":55,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal","funders":"Genome Canada","keywords":"Biology; Methylobacterium; Propagule; Botany; Symbiosis; Ribotyping; Bacteria; Glomeromycota; Mycorrhiza; 16S ribosomal RNA","score_opus":0.004103266031825,"score_gpt":0.1586950183743186,"score_spread":0.1545917523424936,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2065202257","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9985699,0.00009213843,0.0000137426,0.00049970957,0.00013757935,0.00021322929,0.00030668094,0.000052840194,0.000114176226],"genre_scores_gemma":[0.9971781,0.000023836634,0.000087705084,0.0009204781,0.000037083657,0.000019586776,0.001702811,0.000004189767,0.00002624504],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99851894,0.00026331056,0.0003654009,0.00037512972,0.00007576177,0.00040142785],"domain_scores_gemma":[0.99844664,0.0011089816,0.00026836043,0.000083062805,0.0000146039065,0.00007833204],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00027317405,0.0002675411,0.00047806508,0.000062723935,0.00009985863,0.000029879215,0.00017570997,0.00014391326,0.000055952994],"category_scores_gemma":[0.000061883766,0.00011354992,0.000049143568,0.00020556738,0.000057968642,0.00014093358,0.000034832876,0.0002283362,0.000016200367],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00018098367,0.00007254485,0.09951242,0.000009947087,0.00008918844,0.000030076095,0.000119078686,0.0000808058,0.8996575,0.000042431624,0.00013591285,0.00006913563],"study_design_scores_gemma":[0.004541252,0.005264748,0.7804524,0.0050196294,0.00055935234,0.002569013,0.001923315,0.005999858,0.18795398,0.00018847146,0.0025344691,0.0029935727],"about_ca_topic_score_codex":0.0009901129,"about_ca_topic_score_gemma":0.002042981,"teacher_disagreement_score":0.7117035,"about_ca_system_score_codex":0.00003156854,"about_ca_system_score_gemma":0.000009712775,"threshold_uncertainty_score":0.46304312},"labels":[],"label_agreement":null},{"id":"W2065871023","doi":"10.1111/j.1574-6968.2000.tb09024.x","title":"A simple method to evaluate the concentration of pentachlorophenol degraders in contaminated soils","year":2000,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Analytical chemistry methods development","field":"Chemistry","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Polytechnique Montréal; Natural Sciences and Engineering Research Council of Canada","funders":"","keywords":"Pentachlorophenol; Soil water; Chemistry; Most probable number; Environmental chemistry; Contamination; Detection limit; Soil contamination; Environmental science; Chromatography; Soil science; Bacteria; Biology; Ecology","score_opus":0.021110640280451804,"score_gpt":0.30033721275474057,"score_spread":0.2792265724742888,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2065871023","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98906505,0.000043715867,0.0066308533,0.0029674026,0.00003005931,0.00017562283,0.000028044344,0.000028316343,0.0010309487],"genre_scores_gemma":[0.98414755,0.000006369105,0.011490593,0.0037868766,0.000035879468,0.000043143005,0.00012300399,0.000019801162,0.00034678628],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99841857,0.00022061971,0.00048329378,0.00037856324,0.0000799853,0.00041894658],"domain_scores_gemma":[0.999161,0.00035681692,0.00007721567,0.00030034248,0.0000375337,0.00006708113],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0005987683,0.00020410109,0.00033606542,0.000028922954,0.00005146743,0.000010976385,0.00034831386,0.00014286388,0.0030328343],"category_scores_gemma":[0.000091816946,0.00015910943,0.0000819972,0.00020298397,0.00018746303,0.00002986584,0.00004611871,0.00026426296,0.00006059654],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009947602,0.00003409465,0.0016844497,0.000022632317,0.00006817457,0.000010107492,0.0006393548,0.00024062589,0.9913099,0.000009951456,0.0008497409,0.0050314856],"study_design_scores_gemma":[0.0009046879,0.000015735272,0.0011963642,0.000032619937,0.000040989395,0.000028217575,0.00029370643,0.00031519125,0.99183726,0.000044188007,0.0050703394,0.00022068637],"about_ca_topic_score_codex":0.00014539705,"about_ca_topic_score_gemma":0.00001812744,"teacher_disagreement_score":0.004917489,"about_ca_system_score_codex":0.00018767334,"about_ca_system_score_gemma":0.000052427487,"threshold_uncertainty_score":0.99787855},"labels":[],"label_agreement":null},{"id":"W2065883344","doi":"10.1111/j.1574-6968.2000.tb09136.x","title":"Multicopy suppression of a<i>gacA</i>mutation by the<i>infC</i>operon in<i>Pseudomonas fluorescens</i>CHA0: competition with the global translational regulator RsmA","year":2000,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Genomics and Phylogenetic Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":21,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Infrastructure Canada; Schweizerischer Nationalfonds zur Förderung der Wissenschaftlichen Forschung","keywords":"Operon; Pseudomonas fluorescens; Biology; Gene; Regulator; Repressor; Genetics; Mutant; Gene expression; Bacteria","score_opus":0.0034717072772274793,"score_gpt":0.19374029026969902,"score_spread":0.19026858299247154,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2065883344","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9920641,0.0010086431,0.00022031773,0.0059322957,0.00008797143,0.00031561992,0.00023114918,0.0000035260218,0.00013637662],"genre_scores_gemma":[0.9970598,0.000107516295,0.00030563946,0.0019079938,0.00008034744,0.00002608841,0.00044380606,0.000013171126,0.000055631823],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9990129,0.0001463459,0.00023604509,0.00030311962,0.00006124474,0.00024037203],"domain_scores_gemma":[0.999564,0.000031959113,0.00009472651,0.0002455203,0.000039261966,0.000024529776],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013598075,0.00018210408,0.00016709087,0.000015332298,0.00012626425,0.000010313416,0.00021609434,0.00011896911,0.00003225506],"category_scores_gemma":[0.0000043443006,0.00011241417,0.00006691888,0.00008562369,0.0004261918,0.0000020493515,0.000031287054,0.00009649712,0.000007110837],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00030654183,0.000043057276,0.005403215,0.000005987852,0.00006171886,0.0000014004598,0.00015088556,0.001317403,0.98556596,0.000028747456,0.0064037596,0.00071134046],"study_design_scores_gemma":[0.00403938,0.00049850455,0.07506091,0.000058026257,0.00008678409,0.00022302206,0.00020386218,0.0001354862,0.80453193,0.00007153751,0.11454421,0.00054635416],"about_ca_topic_score_codex":0.000061400795,"about_ca_topic_score_gemma":0.00012946696,"teacher_disagreement_score":0.18103403,"about_ca_system_score_codex":0.00001607797,"about_ca_system_score_gemma":0.000025833446,"threshold_uncertainty_score":0.4584117},"labels":[],"label_agreement":null},{"id":"W2066366443","doi":"10.1111/j.1574-6968.2002.tb11134.x","title":"Construction and initial characterization of a luminescent<i>Synechococcus</i>sp. PCC 7942 Fe-dependent bioreporter","year":2002,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"bioluminescence and chemiluminescence research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":57,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Toronto Metropolitan University","funders":"Natural Sciences and Engineering Research Council of Canada; Bowling Green State University; National Science Foundation","keywords":"Bioreporter; Synechococcus; Biology; Luminescence; Vibrio harveyi; Vibrio parahaemolyticus; Cyanobacteria; Transcription (linguistics); Exponential growth; Biophysics; Vibrio; Microbiology; Molecular biology; Reporter gene; Gene; Biochemistry; Bacteria; Gene expression; Materials science; Genetics; Physics; Optoelectronics","score_opus":0.010974821380483907,"score_gpt":0.2287733414863083,"score_spread":0.21779852010582437,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2066366443","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99777067,0.00015510665,0.00048097697,0.0009269497,0.00026658934,0.00023921169,0.00007887893,0.00001700715,0.0000646111],"genre_scores_gemma":[0.9974603,0.0003843656,0.00022029619,0.0008631282,0.0002829646,0.000022552947,0.00059848407,0.000022160737,0.00014573804],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9986445,0.000068514775,0.00036781258,0.0004822224,0.00007384277,0.00036311813],"domain_scores_gemma":[0.99931014,0.000009323975,0.00019802213,0.0003045164,0.00010001152,0.00007796176],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013215994,0.00021545994,0.0002372889,0.000097143275,0.00007556069,0.000019342971,0.00017320237,0.00029065556,0.000078917015],"category_scores_gemma":[0.000037176047,0.0002049575,0.00007763357,0.0001198089,0.0006143437,0.000015744463,0.00012265625,0.00012064315,0.00001348179],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000047043024,0.00006510438,0.020960154,0.00004081885,0.000039717914,0.0000107515725,0.000047980808,1.2796075e-7,0.975068,0.000002986585,0.0010599643,0.0026573688],"study_design_scores_gemma":[0.00060389214,0.00012231016,0.002468951,0.000028711807,0.00002053187,0.00037091802,0.00004116313,0.000007780453,0.99098366,0.0000012588152,0.0051173135,0.00023349246],"about_ca_topic_score_codex":0.000014856894,"about_ca_topic_score_gemma":0.0000057617913,"teacher_disagreement_score":0.018491203,"about_ca_system_score_codex":0.000016363694,"about_ca_system_score_gemma":0.00002006729,"threshold_uncertainty_score":0.8357924},"labels":[],"label_agreement":null},{"id":"W2066759831","doi":"10.1111/j.1574-6968.2004.tb09610.x","title":"Differences in biofilm and planktonic cell mediated reduction of metalloid oxyanions","year":2004,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Bacterial biofilms and quorum sensing","field":"Biochemistry, Genetics and Molecular Biology","cited_by":48,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"Metalloid; Tellurate; Biofilm; Microbiology; Chemistry; Selenium; Staphylococcus aureus; Pseudomonas aeruginosa; Bacteria; Biology; Organic chemistry; Metal","score_opus":0.007199354232105889,"score_gpt":0.19178186781112497,"score_spread":0.1845825135790191,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2066759831","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9983029,0.00044844096,0.000027868302,0.00081874116,0.00021829989,0.00010106174,0.000041988435,0.0000070563833,0.000033655593],"genre_scores_gemma":[0.9983007,0.00021562185,0.0007828158,0.00030937948,0.00005770728,0.0000026047617,0.00030612267,0.000009446705,0.000015614924],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9992465,0.000051302908,0.00020337594,0.00027236476,0.000017999879,0.00020845355],"domain_scores_gemma":[0.9997273,0.000008170531,0.0000909727,0.00012790781,0.000013967441,0.00003170198],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00008438946,0.00012857847,0.00018741479,0.00007485702,0.000034462737,0.0000065872255,0.00007715482,0.0001794984,0.0000069333537],"category_scores_gemma":[0.000010229702,0.00011457903,0.000042437074,0.00007253265,0.00022465596,0.0000035338544,0.00005347264,0.000088946836,0.0000035396138],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000044553817,0.000034188935,0.0011150019,0.000007652591,0.000023389619,0.0000016315441,0.00006207896,0.000005802802,0.99852765,0.00001176152,0.00010014332,0.00006614125],"study_design_scores_gemma":[0.00072577054,0.0001456444,0.005532902,0.000015015716,0.000011540096,0.000066928806,0.000052716525,6.036442e-7,0.9918967,0.000004075814,0.0014089528,0.00013916439],"about_ca_topic_score_codex":0.00013259635,"about_ca_topic_score_gemma":0.000042439988,"teacher_disagreement_score":0.006630969,"about_ca_system_score_codex":0.000011447335,"about_ca_system_score_gemma":0.000028203325,"threshold_uncertainty_score":0.46723974},"labels":[],"label_agreement":null},{"id":"W2067056975","doi":"10.1111/j.1574-6968.2001.tb10835.x","title":"Inactivation of tissue inhibitor of metalloproteinases-1 (TIMP-1) by<i>Porphyromonas gingivalis</i>","year":2001,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Oral microbiology and periodontitis research","field":"Dentistry","cited_by":28,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"Canadian Institutes of Health Research","keywords":"Porphyromonas gingivalis; Matrix metalloproteinase; Chemistry; Microbiology; Metalloproteinase; Proteolytic enzymes; Inflammation; Tissue inhibitor of metalloproteinase; Periodontal pathogen; Proteolysis; Molecular biology; Biology; Bacteria; Biochemistry; Enzyme; Immunology","score_opus":0.012651646615501791,"score_gpt":0.26541482156120255,"score_spread":0.2527631749457008,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2067056975","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9961997,0.00055152713,0.0006840211,0.00082370604,0.0005437799,0.0003822031,0.0004430307,0.00004074944,0.00033124143],"genre_scores_gemma":[0.99663544,0.000042744734,0.0005021052,0.000629411,0.000107644344,0.000020478976,0.000600389,0.000029580819,0.0014322333],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9981872,0.0002994794,0.00057677727,0.0004136655,0.00007768709,0.0004451921],"domain_scores_gemma":[0.99896777,0.000116349525,0.00034081837,0.00039271812,0.00012577006,0.00005658019],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0003214158,0.00024121131,0.0005451358,0.00021041877,0.00008529137,0.000011815238,0.00038830304,0.00032561965,0.0010785055],"category_scores_gemma":[0.00008473863,0.0002289295,0.00015332847,0.00033471858,0.0006857142,0.00015110464,0.00013951599,0.0003413363,0.00020729491],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00018151377,0.00012659148,0.011950036,0.00004570198,0.0001490642,0.00005865124,0.00006793422,0.000003216162,0.9443697,0.000051519415,0.04219903,0.0007970655],"study_design_scores_gemma":[0.0007090694,0.00020401226,0.0041771354,0.000040609262,0.000028479892,0.00024174631,0.000023946468,7.8225145e-7,0.9463064,0.000026508906,0.048034444,0.00020687905],"about_ca_topic_score_codex":0.0007396474,"about_ca_topic_score_gemma":0.00006212965,"teacher_disagreement_score":0.0077728997,"about_ca_system_score_codex":0.00005823861,"about_ca_system_score_gemma":0.000036561516,"threshold_uncertainty_score":0.99983466},"labels":[],"label_agreement":null},{"id":"W2067683133","doi":"10.1111/1574-6968.12236","title":"The arbuscular mycorrhizal fungus,<i>Glomus irregulare</i>, controls the mycotoxin production of<i>Fusarium sambucinum</i>in the pathogenesis of potato","year":2013,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Mycorrhizal Fungi and Plant Interactions","field":"Agricultural and Biological Sciences","cited_by":46,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Trichothecene; Biology; Mycotoxin; Fungus; Fusarium; Glomus; Postharvest; Symbiosis; Diacetoxyscirpenol; Botany; Spore; Bacteria","score_opus":0.005383118557916723,"score_gpt":0.17346953811622873,"score_spread":0.168086419558312,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2067683133","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97650015,0.0010034632,0.0000063210537,0.02016501,0.00086371566,0.0009566367,0.0004035032,0.000017140073,0.00008404474],"genre_scores_gemma":[0.9955399,0.00048866734,0.000025165305,0.0028019992,0.00027917075,0.00014274025,0.0005563038,0.0000023793814,0.00016367598],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.99802274,0.0006617763,0.00047742645,0.00030425788,0.000107051776,0.0004267691],"domain_scores_gemma":[0.99662435,0.002795221,0.00021372657,0.00024066643,0.00009636887,0.0000296465],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007539511,0.00020456396,0.00028086637,0.000020976166,0.00033023514,0.00004680223,0.00068176066,0.00011743335,0.00052139675],"category_scores_gemma":[0.00020379463,0.000047446938,0.00020821777,0.00030370723,0.000116937845,0.0000847594,0.000053095468,0.00026385102,0.00015150782],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000109555294,0.000057045578,0.009728785,0.0000056592767,0.000040792667,0.0000033590172,0.0003033236,0.00003419107,0.9675654,0.000086506916,0.020837242,0.0012281039],"study_design_scores_gemma":[0.00050759036,0.000851648,0.28349212,0.00015933918,0.00022762503,0.001361363,0.005063824,0.00008281704,0.32020652,0.00060651335,0.38656947,0.0008711932],"about_ca_topic_score_codex":0.0017745221,"about_ca_topic_score_gemma":0.0005599498,"teacher_disagreement_score":0.64735895,"about_ca_system_score_codex":0.000017330944,"about_ca_system_score_gemma":0.000009486513,"threshold_uncertainty_score":0.5708929},"labels":[],"label_agreement":null},{"id":"W2069226360","doi":"10.1111/j.1574-6968.2000.tb09284.x","title":"A novel degradative pathway of 2-nitrobenzoate via 3-hydroxyanthranilate in<i>Pseudomonas fluorescens</i>strain KU-7","year":2000,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Microbial Metabolic Engineering and Bioproduction","field":"Biochemistry, Genetics and Molecular Biology","cited_by":54,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"National Research Council Canada; Biotechnology Research Institute","funders":"","keywords":"Pseudomonas fluorescens; Metabolite; Pseudomonas; Bacteria; Strain (injury); Metabolism; Chemistry; Metabolic pathway; Biochemistry; Thin-layer chromatography; Pseudomonadaceae; Enzyme; Stereochemistry; Chromatography; Biology","score_opus":0.0048892469722113495,"score_gpt":0.19063446657156055,"score_spread":0.1857452195993492,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2069226360","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9964735,0.00035920838,0.0018604611,0.00048086795,0.00028790708,0.00022152114,0.00022127863,0.000022129647,0.000073122224],"genre_scores_gemma":[0.9955356,0.00010992769,0.0025899168,0.0007179146,0.00023778908,0.000012611298,0.0004887297,0.000033648554,0.000273873],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.998573,0.000073584735,0.00038945407,0.0005137633,0.000039582166,0.00041062944],"domain_scores_gemma":[0.9994648,0.0000060845377,0.00010436496,0.00034125324,0.00003402948,0.000049442144],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00021839196,0.0002659271,0.00032094252,0.00010506118,0.000041364103,0.0000066841553,0.00022124399,0.00023278373,0.00006824777],"category_scores_gemma":[0.00002126458,0.00025296843,0.0001256271,0.00017968017,0.0002274144,0.000006020906,0.000042172996,0.00019900047,0.000022502822],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012494414,0.00010291618,0.00017865618,0.00001687595,0.00006260477,0.0000049694218,0.00009282467,0.0006814837,0.9939868,0.000007357333,0.0004887007,0.004251911],"study_design_scores_gemma":[0.00095056853,0.00011656487,0.0013677429,0.000030568917,0.000013961519,0.00023135277,0.000011475445,0.000020749298,0.9777276,0.000004502036,0.019236721,0.0002882033],"about_ca_topic_score_codex":0.0001389149,"about_ca_topic_score_gemma":0.000051878393,"teacher_disagreement_score":0.01874802,"about_ca_system_score_codex":0.000019109379,"about_ca_system_score_gemma":0.000027509157,"threshold_uncertainty_score":0.99999225},"labels":[],"label_agreement":null},{"id":"W2069519905","doi":"10.1111/j.1574-6968.2000.tb09300.x","title":"Protoplast preparation and regeneration from spores of the biocontrol fungus<i>Pseudozyma flocculosa</i>","year":2000,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Plant Parasitism and Resistance","field":"Agricultural and Biological Sciences","cited_by":45,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Protoplast; Spore; Sucrose; Biological pest control; Regeneration (biology); Fungus; Biology; Microbiology; Chemistry; Biochemistry; Botany; Cell biology","score_opus":0.00402308609027854,"score_gpt":0.1714751430622357,"score_spread":0.16745205697195717,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2069519905","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9953371,0.00026515036,0.0000024781227,0.0033779126,0.000097514254,0.00040082313,0.00041238175,0.000016555914,0.00009006758],"genre_scores_gemma":[0.99806106,0.000042144336,0.000037403806,0.0012138208,0.00014957605,0.000024774812,0.0002512804,5.8367317e-7,0.00021933201],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.999361,0.000084577616,0.00016373869,0.00021704234,0.00003367625,0.00013999507],"domain_scores_gemma":[0.9997649,0.000061712155,0.000082486564,0.000058282854,0.00001151462,0.0000210875],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00006411191,0.00009598736,0.00012999226,0.0000046474415,0.00013444571,0.000017676088,0.0001379767,0.00008716248,0.00019215536],"category_scores_gemma":[0.0000054184943,0.000032649958,0.00004471635,0.00007227709,0.0001455582,0.00005595511,0.00001727279,0.000063000836,0.000014716138],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008219704,0.000013951316,0.01039675,0.0000017128201,0.000011273517,0.0000011404904,0.00004652142,0.000018622166,0.9827253,0.0000068905024,0.0033966182,0.003298988],"study_design_scores_gemma":[0.00043514042,0.00010804389,0.3604526,0.000049366387,0.000024635521,0.000042560645,0.000023015828,0.000052251973,0.5933787,0.00004971481,0.045161728,0.00022222528],"about_ca_topic_score_codex":0.0003085762,"about_ca_topic_score_gemma":0.0009089238,"teacher_disagreement_score":0.3893466,"about_ca_system_score_codex":0.000006622105,"about_ca_system_score_gemma":0.0000034467428,"threshold_uncertainty_score":0.21039665},"labels":[],"label_agreement":null},{"id":"W2069977059","doi":"10.1016/j.femsle.2004.07.033","title":"Suppressive subtractive hybridization and differential screening identified genes differentially expressed in yeast and mycelial forms of","year":2004,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Plant Disease Resistance and Genetics","field":"Agricultural and Biological Sciences","cited_by":15,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"Suppression subtractive hybridization; Biology; Mycelium; Yeast; Gene; cDNA library; Complementary DNA; Genetics; Escherichia coli; Genomic library; Molecular biology; Peptide sequence; Botany","score_opus":0.008148019896764691,"score_gpt":0.18873504153068482,"score_spread":0.18058702163392013,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2069977059","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99857277,0.00023838705,0.00015506506,0.0003896039,0.000063238396,0.00015351176,0.00041180704,0.000010565462,0.000005079816],"genre_scores_gemma":[0.99923056,0.0001596356,0.00005354268,0.00010920794,0.000054781176,0.0000064761057,0.0003797566,0.0000011458978,0.000004893416],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99929315,0.00004241459,0.00017824495,0.00024804848,0.00004114927,0.00019701471],"domain_scores_gemma":[0.9997616,0.000045284425,0.00009911474,0.00003247544,0.000018780387,0.000042759413],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0000346785,0.00012138406,0.00018790948,0.000024574962,0.00006625441,0.000025544363,0.000084698106,0.00007895288,0.000016022774],"category_scores_gemma":[0.000009136151,0.00005853006,0.000035247147,0.00006287118,0.00013748565,0.000073863965,0.000056801622,0.00006834823,9.254556e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012924973,0.000036251065,0.013921356,0.00000930515,0.000019083353,0.000008964634,0.00007768338,0.000019699602,0.9836248,0.000019172825,0.000023574778,0.002110853],"study_design_scores_gemma":[0.0006886244,0.000050253042,0.63027656,0.00005213218,0.000020244026,0.000013416065,0.00010299912,0.00000704543,0.36843723,0.00011432454,0.000089492816,0.00014766805],"about_ca_topic_score_codex":0.00008668281,"about_ca_topic_score_gemma":0.00047661932,"teacher_disagreement_score":0.61635524,"about_ca_system_score_codex":0.000006552512,"about_ca_system_score_gemma":0.0000044161734,"threshold_uncertainty_score":0.23867865},"labels":[],"label_agreement":null},{"id":"W2069984784","doi":"10.1111/j.1574-6968.2006.00587.x","title":"Structure of<i>Proteus mirabilis</i>biofilms grown in artificial urine and standard laboratory media","year":2007,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Bacterial biofilms and quorum sensing","field":"Biochemistry, Genetics and Molecular Biology","cited_by":64,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Biofilm; Proteus mirabilis; Confocal laser scanning microscopy; Microbiology; Chemistry; Proteus; Bacteria; Biology; Biochemistry; Pseudomonas aeruginosa; Escherichia coli","score_opus":0.004385951139524958,"score_gpt":0.20307020813428917,"score_spread":0.19868425699476422,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2069984784","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99807703,0.00038151664,0.000035027904,0.00047785553,0.00048630562,0.00017599204,0.0003435467,0.000009365329,0.000013347234],"genre_scores_gemma":[0.99661213,0.000026406615,0.0016970168,0.0010521637,0.00030251432,9.080681e-7,0.00028508806,0.000020050293,0.000003709429],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9987631,0.000072392344,0.00036142944,0.00038846573,0.00003869864,0.00037593552],"domain_scores_gemma":[0.99950916,0.000026700103,0.00012457652,0.00023000882,0.000046659567,0.0000628903],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002748049,0.00019730719,0.0002746868,0.00009736219,0.00004287324,0.0000108111835,0.00011096973,0.00032410733,0.000019476007],"category_scores_gemma":[0.000062155785,0.00018239232,0.00004833269,0.0001223278,0.00037640394,0.0000049210357,0.00009074923,0.0001684285,0.0000012791987],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000388363,0.000016495309,0.0047889263,0.000014415449,0.000027680911,0.000014698478,0.0000886647,0.0000018640897,0.9928456,0.000023743834,0.000658564,0.0011310107],"study_design_scores_gemma":[0.0005249769,0.00013180696,0.00853304,0.000014644959,0.000010747948,0.000038020877,0.000049494778,2.299926e-7,0.9822058,0.000008892,0.00827958,0.00020273936],"about_ca_topic_score_codex":0.000045241406,"about_ca_topic_score_gemma":0.00050618395,"teacher_disagreement_score":0.010639747,"about_ca_system_score_codex":0.000015236892,"about_ca_system_score_gemma":0.00003795608,"threshold_uncertainty_score":0.7437743},"labels":[],"label_agreement":null},{"id":"W2070585575","doi":"10.1016/s0378-1097(03)00209-x","title":"RNase H overproduction allows the expression of stress-induced genes in the absence of topoisomerase I","year":2003,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Cancer therapeutics and mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":18,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal","funders":"National Institute of General Medical Sciences","keywords":"Mutant; RNase P; Topoisomerase; Heat shock; Gene; Transcription (linguistics); Escherichia coli; Biology; Gene expression; DNA supercoil; Molecular biology; Cell biology; Overproduction; Heat shock protein; Chemistry; Genetics; DNA; RNA; DNA replication","score_opus":0.01065753672525299,"score_gpt":0.23281688420460717,"score_spread":0.22215934747935417,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2070585575","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9978181,0.00079851854,0.00021826198,0.00062814925,0.0002847435,0.00018686928,0.000024708328,0.0000017831148,0.000038847607],"genre_scores_gemma":[0.9982889,0.0001697715,0.00012167632,0.0012740066,0.00006517513,0.000016420418,0.000036232712,0.000007756855,0.000020025247],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99924314,0.0001706009,0.00019121416,0.00020650614,0.000038024493,0.00015049982],"domain_scores_gemma":[0.99944144,0.000019460877,0.00012821985,0.0003730276,0.000026585196,0.000011288386],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00025179752,0.0001010985,0.00011471782,0.000028669536,0.000040172166,0.000003774479,0.00021424414,0.00008554659,0.000012778631],"category_scores_gemma":[0.000018835244,0.00006205143,0.0000658614,0.00007327113,0.00010963153,0.000002361733,0.000029751967,0.00008527034,8.098287e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00004487787,0.000047445254,0.00054267194,0.000007678511,0.000016439348,0.0000010727434,0.00019994208,0.00007157849,0.998211,0.0000927355,0.00027421652,0.00049034134],"study_design_scores_gemma":[0.00028909562,0.00009713541,0.0004161701,0.000013013241,0.0000068307786,0.000019380397,0.00023542177,7.5461594e-7,0.9908456,0.000025352689,0.007979031,0.00007222066],"about_ca_topic_score_codex":0.000060872204,"about_ca_topic_score_gemma":0.000056820583,"teacher_disagreement_score":0.007704814,"about_ca_system_score_codex":0.000007216847,"about_ca_system_score_gemma":0.000027236143,"threshold_uncertainty_score":0.2530384},"labels":[],"label_agreement":null},{"id":"W2070884245","doi":"10.1016/j.femsle.2004.08.045","title":"Heterologous complementation of the exopolysaccharide synthesis and carbon utilization phenotypes of<i>Sinorhizobium meliloti</i>Rm1021 polyhydroxyalkanoate synthesis mutants","year":2004,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Legume Nitrogen Fixing Symbiosis","field":"Agricultural and Biological Sciences","cited_by":44,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; University of Waterloo","funders":"Natural Sciences and Engineering Research Council of Canada; China Scholarship Council; U.S. Department of Agriculture","keywords":"Complementation; Sinorhizobium meliloti; Biology; Phenotype; Mutant; Bradyrhizobium japonicum; Genetics; Sinorhizobium; Gene; Strain (injury); clone (Java method); Microbiology; Rhizobiaceae; Bacteria; Symbiosis","score_opus":0.017137858416221896,"score_gpt":0.2048666888796403,"score_spread":0.1877288304634184,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2070884245","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99613607,0.00017299425,0.0000019360027,0.0029924936,0.00019953701,0.00025110992,0.00019165513,0.00003202745,0.000022194667],"genre_scores_gemma":[0.99896735,0.000016647622,0.00012060623,0.0007982315,0.000048339658,0.000017736851,0.000024957284,0.0000033089852,0.0000027936735],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99865305,0.00022607726,0.00040321724,0.0003326889,0.000088513174,0.0002964274],"domain_scores_gemma":[0.99910474,0.00032223787,0.00036278486,0.00012298618,0.000050505074,0.000036730526],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00020108157,0.0001992042,0.00033374716,0.000034096913,0.00013852377,0.000013028319,0.00031893747,0.00012462959,0.000048369875],"category_scores_gemma":[0.0001031048,0.000086603104,0.000116267576,0.00025785316,0.0003711174,0.00006245268,0.00011553891,0.00009671026,0.000003375986],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00003726969,0.000048650207,0.017820364,0.000012287207,0.000070578695,0.0000010502682,0.0001461057,0.000003926232,0.98055357,0.000027237988,0.000021540349,0.0012574284],"study_design_scores_gemma":[0.00015085979,0.00006312366,0.047282085,0.000052719817,0.00008980059,0.000021262787,0.00009132972,0.0000018707549,0.9520256,0.00006192724,0.000020778574,0.00013867539],"about_ca_topic_score_codex":0.0015422133,"about_ca_topic_score_gemma":0.00046920805,"teacher_disagreement_score":0.029461721,"about_ca_system_score_codex":0.000045649296,"about_ca_system_score_gemma":0.000010747299,"threshold_uncertainty_score":0.3531572},"labels":[],"label_agreement":null},{"id":"W2071842442","doi":"10.1111/j.1574-6968.2010.01941.x","title":"The isolation of citric acid derivatives from<i>Aspergillus niger</i>","year":2010,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Fermentation and Sensory Analysis","field":"Agricultural and Biological Sciences","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of Manitoba","funders":"Natural Sciences and Engineering Research Council of Canada; Directorate for Biological Sciences","keywords":"Aspergillus niger; Citric acid; Fermentation; Oxalate; Chemistry; Fungus; Extraction (chemistry); Isolation (microbiology); Strain (injury); Food science; Biochemistry; Biology; Microbiology; Botany; Chromatography; Organic chemistry","score_opus":0.008182623774214196,"score_gpt":0.19260376942927207,"score_spread":0.18442114565505788,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2071842442","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99304616,0.000046140492,0.000023074845,0.006387125,0.00025034178,0.00007029036,0.000047514273,0.000020440442,0.00010890658],"genre_scores_gemma":[0.99733526,0.000017341612,0.00016469692,0.002079439,0.00011161559,0.000003824327,0.00018528513,5.973656e-7,0.00010195583],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99933314,0.00010460832,0.00019770885,0.00017310726,0.000035232355,0.0001562005],"domain_scores_gemma":[0.99948263,0.00026540746,0.0001282901,0.000062918174,0.000034414952,0.000026326521],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00011377443,0.000089331654,0.00012465246,0.000011969937,0.00023521384,0.000020011566,0.00020408085,0.00007947346,0.00040571066],"category_scores_gemma":[0.00003881127,0.000029953917,0.000092227005,0.00020674925,0.00022595518,0.000046643912,0.00002885964,0.00013725631,0.00004418649],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000017537848,0.00001283371,0.008966914,2.7985823e-7,0.00002934798,4.963121e-7,0.00010428799,0.0000021709805,0.9865944,0.00003724867,0.0011390138,0.0030955095],"study_design_scores_gemma":[0.00021442602,0.0000688517,0.24244985,0.0000033515971,0.000026890413,0.0000064605356,0.00044270212,0.00004329011,0.7290491,0.000109319735,0.027387086,0.0001986995],"about_ca_topic_score_codex":0.00012465782,"about_ca_topic_score_gemma":0.0006594973,"teacher_disagreement_score":0.2575453,"about_ca_system_score_codex":0.0000059101512,"about_ca_system_score_gemma":0.0000023829712,"threshold_uncertainty_score":0.44422475},"labels":[],"label_agreement":null},{"id":"W2072522551","doi":"10.1111/j.1574-6968.2002.tb11162.x","title":"Identification of in vivo essential genes from<i>Pseudomonas aeruginosa</i>by PCR-based signature-tagged mutagenesis","year":2002,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Bacterial Genetics and Biotechnology","field":"Biochemistry, Genetics and Molecular Biology","cited_by":34,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"Canadian Institutes of Health Research","keywords":"Mutant; Mutagenesis; Gene; Transposon mutagenesis; Transposable element; Biology; Pseudomonas aeruginosa; Genetics; Phenotype; Microbiology; Bacteria","score_opus":0.004582857243639388,"score_gpt":0.1886959634273834,"score_spread":0.18411310618374402,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2072522551","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9944406,0.0018692664,0.0007515142,0.0016721176,0.0004901206,0.00023620254,0.0005068771,0.000020922162,0.000012377789],"genre_scores_gemma":[0.9969477,0.0002656629,0.00045668503,0.001376905,0.00016063609,0.000025187825,0.00063553994,0.000029479546,0.00010218004],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99832195,0.00013980061,0.000502449,0.0006184212,0.00005270102,0.0003646804],"domain_scores_gemma":[0.9991377,0.000021854661,0.000263057,0.00048703057,0.00004742532,0.00004293569],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00012765027,0.00025861146,0.0003100901,0.0001324285,0.000050227023,0.000015503643,0.0004146501,0.0006508586,0.00014570064],"category_scores_gemma":[0.000025966683,0.00026262293,0.00013158494,0.00016390342,0.00033792,0.0000037674806,0.00009763479,0.00015560295,0.000018343098],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000729388,0.00013706475,0.0017303615,0.000009861808,0.00006260205,0.0000055394084,0.000019752815,0.00007125783,0.98661685,0.0000021749204,0.010646454,0.0006251441],"study_design_scores_gemma":[0.0008988517,0.00010077792,0.0004939753,0.000009200792,0.000026865819,0.0000072479775,0.000010546367,0.000052889114,0.9819347,0.000004197344,0.016187113,0.00027362086],"about_ca_topic_score_codex":0.00009101729,"about_ca_topic_score_gemma":0.00007240403,"teacher_disagreement_score":0.005540659,"about_ca_system_score_codex":0.000019966095,"about_ca_system_score_gemma":0.000018465365,"threshold_uncertainty_score":0.9999826},"labels":[],"label_agreement":null},{"id":"W2073013388","doi":"10.1111/j.1574-6968.2004.tb09590.x","title":"Corrigendum to âThe<i>csbX</i>gene of<i>Azotobacter vinelandii</i>encodes an MFS efflux pump required for catecholate siderophore exportâ [FEMS Microbiol. Lett. 228 (2004) 211â216]","year":2004,"lang":"en","type":"erratum","venue":"FEMS Microbiology Letters","topic":"Microbial Community Ecology and Physiology","field":"Environmental Science","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"Azotobacter vinelandii; Siderophore; Efflux; Operon; Gene; Aeromonas hydrophila; Microbiology; Biology; Chemistry; Biochemistry; Genetics; Bacteria; Escherichia coli; Nitrogenase","score_opus":0.01816683223534679,"score_gpt":0.23459034738759624,"score_spread":0.21642351515224945,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2073013388","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.95272964,0.00046739657,0.0007848709,0.0026989018,0.034144033,0.0036682284,0.004283953,0.00027306424,0.00094990665],"genre_scores_gemma":[0.63810277,0.0008756147,0.013103342,0.11844458,0.006256744,0.0020506142,0.11264102,0.0017110441,0.106814295],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.99297506,0.0008273856,0.0016856695,0.002157246,0.00014634803,0.0022082813],"domain_scores_gemma":[0.99569494,0.00020173407,0.0012263966,0.002337109,0.00010725139,0.00043259305],"candidate_categories":["metaepi_narrow","research_integrity","insufficient_payload"],"consensus_categories":["metaepi_narrow","research_integrity","insufficient_payload"],"category_scores_codex":[0.0009722027,0.0015633676,0.0022118578,0.00044619548,0.0007795427,0.00006786779,0.0029264996,0.0027346567,0.0027143557],"category_scores_gemma":[0.00012767011,0.0015259366,0.00073428254,0.00055299286,0.0018695337,0.00029724187,0.0011983848,0.0023532172,0.0011720371],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00022599414,0.00020769074,0.00054720184,0.00006955765,0.00019314501,0.000030150237,0.00052750844,0.00022418947,0.54719996,0.0000028052932,0.45069954,0.00007223209],"study_design_scores_gemma":[0.002533206,0.0018698766,0.0023134158,0.0002815223,0.00036827533,0.00044825472,0.00009572494,0.000006516283,0.16197011,0.00025737187,0.82720906,0.002646689],"about_ca_topic_score_codex":0.0021375772,"about_ca_topic_score_gemma":0.004006817,"teacher_disagreement_score":0.3852299,"about_ca_system_score_codex":0.0009718155,"about_ca_system_score_gemma":0.00027354358,"threshold_uncertainty_score":0.9999484},"labels":[],"label_agreement":null},{"id":"W2074387222","doi":"10.1111/j.1574-6968.2002.tb11032.x","title":"Inactivation of the<i>Mycobacterium tuberculosis Nramp</i>orthologue (<i>mntH</i>) does not affect virulence in a mouse model of tuberculosis","year":2002,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Tuberculosis Research and Epidemiology","field":"Medicine","cited_by":36,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institut National de la Recherche Scientifique","funders":"National Institutes of Health; European Commission; Wellcome Trust","keywords":"Virulence; Mycobacterium tuberculosis; Tuberculosis; Macrophage; Mutant; Biology; Intracellular; Microbiology; Pathogen; Gene; Genetics; Medicine; In vitro","score_opus":0.023282012535590084,"score_gpt":0.26092334024448177,"score_spread":0.23764132770889168,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2074387222","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97999203,0.0001306559,0.00014233617,0.018382207,0.00019112369,0.00070324785,0.00029199285,0.00003838926,0.00012800645],"genre_scores_gemma":[0.99005675,0.00048895326,0.00071721803,0.008350836,0.00006137569,0.00007791053,0.000062952306,0.000035829857,0.00014819538],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9969745,0.00063759636,0.0008893763,0.00060717994,0.00015649751,0.00073483656],"domain_scores_gemma":[0.9981681,0.0004649421,0.0003415853,0.00079142785,0.00012137649,0.00011255339],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00070058275,0.00034526736,0.000984021,0.00039619082,0.00007025974,0.000005717859,0.0003808808,0.0004138924,0.00008898458],"category_scores_gemma":[0.00067229423,0.00022566723,0.0003707144,0.0004409284,0.0008492712,0.00014130594,0.00020846304,0.00070250663,0.000026124117],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002616197,0.00027598074,0.1094126,0.00015971597,0.00014506972,0.000005827479,0.00036401593,0.0005137303,0.886569,0.000033164102,0.0018998305,0.00035939773],"study_design_scores_gemma":[0.001545412,0.00026870656,0.055010032,0.0001839633,0.0000892691,0.00008884696,0.00004803246,0.0021841135,0.94005793,0.000022482616,0.0002195333,0.0002816613],"about_ca_topic_score_codex":0.00067109347,"about_ca_topic_score_gemma":0.00022232585,"teacher_disagreement_score":0.054402567,"about_ca_system_score_codex":0.00017336626,"about_ca_system_score_gemma":0.000041904048,"threshold_uncertainty_score":0.9202443},"labels":[],"label_agreement":null},{"id":"W2074744858","doi":"10.1111/j.1574-6968.1997.tb10246.x","title":"Site-directed mutagenesis of the cysteine residues in the Pichia stipitis xylose reductase","year":2006,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Polyamine Metabolism and Applications","field":"Biochemistry, Genetics and Molecular Biology","cited_by":19,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"Canadian Diabetes Association","keywords":"Pichia stipitis; Biochemistry; Cysteine; Xylose metabolism; Cofactor; Xylose; Reductase; Chemistry; Enzyme; Mutagenesis; Yeast; Biology; Saccharomyces cerevisiae; Mutant; Fermentation; Gene","score_opus":0.003361637287429203,"score_gpt":0.19519635100533517,"score_spread":0.19183471371790597,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2074744858","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9939873,0.00081372313,0.00005137215,0.004371345,0.00012501498,0.00025052862,0.0002954261,0.000011053887,0.00009419546],"genre_scores_gemma":[0.99625397,0.000027978009,0.0002760485,0.0024096074,0.0002336862,0.00004178328,0.00049820455,0.000012393765,0.00024632138],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9990054,0.0002245883,0.00024973342,0.0002620741,0.00003693702,0.00022126726],"domain_scores_gemma":[0.9992521,0.000029492583,0.00014644356,0.00053414307,0.000024478839,0.0000133489975],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00016324033,0.0001355642,0.00014881398,0.000042479784,0.000080173646,0.0000073339006,0.00039610767,0.00010393392,0.0000061655155],"category_scores_gemma":[0.000043316802,0.00008599241,0.00008925391,0.00019574644,0.00028506847,0.0000019855868,0.00009021101,0.00009600168,0.0000070867013],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00001993458,0.000048745096,0.005020491,0.0000042710153,0.000013261869,0.000001965284,0.00004379524,0.00002825418,0.97287565,0.000058523918,0.021739673,0.00014544986],"study_design_scores_gemma":[0.00039938942,0.000027449774,0.09334029,0.0000073796755,0.000026028694,0.000049842605,0.000025343876,0.0000015452555,0.8721564,0.00002040821,0.033824727,0.000121184516],"about_ca_topic_score_codex":0.00053762214,"about_ca_topic_score_gemma":0.00046253807,"teacher_disagreement_score":0.10071923,"about_ca_system_score_codex":0.0000061096175,"about_ca_system_score_gemma":0.000024173958,"threshold_uncertainty_score":0.35066688},"labels":[],"label_agreement":null},{"id":"W2074902380","doi":"10.1111/j.1574-6968.2002.tb11173.x","title":"Rapid detection of human rotavirus using colorimetric nucleic acid sequence-based amplification (NASBA)âenzyme-linked immunosorbent assay in sewage treatment effluent","year":2002,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Viral gastroenteritis research and epidemiology","field":"Medicine","cited_by":37,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canadian Food Inspection Agency; Université Laval","funders":"","keywords":"NASBA; Amplicon; Rotavirus; Oligonucleotide; Molecular biology; Nucleic acid; Biology; Hybridization probe; RNA; Biotinylation; Virology; DNA; Chemistry; Polymerase chain reaction; Virus; Biochemistry; Gene","score_opus":0.09069485110767198,"score_gpt":0.317052724479329,"score_spread":0.226357873371657,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2074902380","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99580973,0.0008532257,0.00079027907,0.0012909084,0.00020625615,0.00092509005,0.00005078075,0.00005086544,0.000022852204],"genre_scores_gemma":[0.9975363,0.00016764704,0.0006666327,0.0011807081,0.000085143925,0.00007549244,0.00022908616,0.000030982043,0.000028002483],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9972517,0.00071643654,0.00074321433,0.0005121102,0.00008995024,0.0006865986],"domain_scores_gemma":[0.9990269,0.000072185176,0.0002893803,0.00042315436,0.000069467096,0.00011889674],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0005111987,0.0002863604,0.00070318545,0.000741662,0.000118633725,0.00001062774,0.00016049664,0.00024257247,0.00018004766],"category_scores_gemma":[0.00014685767,0.000257983,0.0002147439,0.00048491082,0.0003642938,0.00006304088,0.000037702273,0.00034832177,0.00005770373],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00033013432,0.0003924219,0.017450752,0.000039029732,0.00010175293,0.000061778635,0.000082688995,0.00012475118,0.9756867,0.0000018525391,0.00015523158,0.005572876],"study_design_scores_gemma":[0.009287055,0.0052783373,0.07271777,0.00023129463,0.00013241012,0.00033666063,0.00007083782,0.0028638872,0.9063557,0.000005396179,0.0023385058,0.00038217282],"about_ca_topic_score_codex":0.00082963664,"about_ca_topic_score_gemma":0.000089417845,"teacher_disagreement_score":0.069331065,"about_ca_system_score_codex":0.0010901967,"about_ca_system_score_gemma":0.00003413512,"threshold_uncertainty_score":0.99998724},"labels":[],"label_agreement":null},{"id":"W2074945105","doi":"10.1016/s0378-1097(03)00593-7","title":"A comparative study between an endoglucanase IV and its fused protein complex Cel5-CBM6","year":2003,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Biofuel production and bioconversion","field":"Engineering","cited_by":23,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Toronto Metropolitan University; Université Laval","funders":"","keywords":"Cellulase; Cellulose; Hydrolysis; Xylanase; Chemistry; Carbohydrate-binding module; Biochemistry; Enzyme","score_opus":0.040469076711294266,"score_gpt":0.24371903344048615,"score_spread":0.20324995672919188,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2074945105","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9981036,0.00010918599,0.000054038817,0.00042219754,0.0002044328,0.00080045854,0.000040850642,0.0001701272,0.00009508329],"genre_scores_gemma":[0.99910116,0.0000023774223,0.00026544652,0.00038183783,0.00008104675,0.000023545605,0.000081548314,0.000017011047,0.000046034187],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99896955,0.00020029348,0.0001901874,0.00032950687,0.000031298834,0.0002791578],"domain_scores_gemma":[0.9996608,0.00001677737,0.000037823764,0.00017585816,0.000020947376,0.00008779485],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015129123,0.00020452226,0.00028100467,0.0000988115,0.0001052936,0.000020356942,0.000108592285,0.00009337392,0.000099731435],"category_scores_gemma":[0.0000053079193,0.00019007643,0.000028830067,0.00011085656,0.00009298064,0.000086011205,0.000022513972,0.00021877786,0.00007499784],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000010843581,0.000053647967,0.0022672957,0.000023396993,0.000075512864,0.0000063739735,0.00080299395,0.000017683109,0.9942604,0.000008434946,0.002424147,0.000049323004],"study_design_scores_gemma":[0.004284843,0.00069378625,0.017415764,0.000022344344,0.000085487554,0.00008477492,0.002250915,0.00021641553,0.893389,0.000015026676,0.08051286,0.0010287926],"about_ca_topic_score_codex":0.000018695278,"about_ca_topic_score_gemma":0.000017447195,"teacher_disagreement_score":0.100871354,"about_ca_system_score_codex":0.000040856663,"about_ca_system_score_gemma":0.000007877469,"threshold_uncertainty_score":0.7751092},"labels":[],"label_agreement":null},{"id":"W2075151436","doi":"10.1111/j.1574-6968.1997.tb10295.x","title":"Cloning and characterization of the eae gene from a dog attaching and effacing Escherichia coli strain 4221","year":2006,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Escherichia coli research studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":34,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal","funders":"","keywords":"Escherichia coli; Citrobacter freundii; Biology; Fusion protein; Microbiology; Peptide sequence; Nucleic acid sequence; Molecular biology; Enteropathogenic Escherichia coli; Maltose-binding protein; Gene; Virology; Enterobacteriaceae; Biochemistry; Recombinant DNA","score_opus":0.0051789402241859085,"score_gpt":0.21579414933748156,"score_spread":0.21061520911329565,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2075151436","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9977084,0.00050493795,0.0005659556,0.0007685369,0.000092719194,0.00018388138,0.00015118916,0.0000075221005,0.000016870135],"genre_scores_gemma":[0.9978564,0.00008767799,0.0007787693,0.00080902677,0.00016258589,0.000011734208,0.00024351652,0.000014914586,0.00003539635],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99908847,0.00015232501,0.00018853118,0.00030622614,0.000034638,0.0002298103],"domain_scores_gemma":[0.99962205,0.00002904594,0.00012298122,0.0001751049,0.000026889107,0.00002395616],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015552207,0.00014428739,0.00016965256,0.00002492568,0.0001529303,0.000020441757,0.00011978579,0.00011360454,0.0000024252452],"category_scores_gemma":[0.000035763147,0.00011521511,0.000039799066,0.00006238485,0.0002709975,0.000005026403,0.00025687894,0.00013752136,4.8185e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00001667556,0.000011244711,0.073358,0.000012419226,0.000051757062,0.0000010834601,0.0000805418,0.000008273099,0.9262752,0.0000071052946,0.000080580496,0.00009715092],"study_design_scores_gemma":[0.00042053882,0.000041583688,0.37408394,0.000018374132,0.000019910214,0.0000072965736,0.00002044547,0.000024825396,0.6234735,0.0000066571006,0.001746372,0.0001365447],"about_ca_topic_score_codex":0.00015376687,"about_ca_topic_score_gemma":0.000054620537,"teacher_disagreement_score":0.30280164,"about_ca_system_score_codex":0.000010145947,"about_ca_system_score_gemma":0.000019802106,"threshold_uncertainty_score":0.46983358},"labels":[],"label_agreement":null},{"id":"W2075487534","doi":"10.1111/j.1574-6968.2006.00291.x","title":"Microbial adhesion to hydrocarbons: twenty-five years of doing MATH","year":2006,"lang":"en","type":"review","venue":"FEMS Microbiology Letters","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":253,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Citation; Adhesion; Perspective (graphical); Quarter (Canadian coin); Solid surface; Chemistry; Hydrocarbon; Bacteria; Nanotechnology; Mathematics; History; Biology; Archaeology; Organic chemistry; Computer science; Materials science; Library science; Paleontology; Geometry","score_opus":0.012192907399408193,"score_gpt":0.2417796832473557,"score_spread":0.22958677584794748,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2075487534","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.20713179,0.7804093,0.00010843982,0.00065626873,0.003873668,0.0044909324,0.0018487757,0.0002445625,0.0012363164],"genre_scores_gemma":[0.001936604,0.983615,0.0049901693,0.0053327754,0.0004959794,0.000046866775,0.0021475886,0.00019794326,0.0012370645],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.99742883,0.0002313141,0.0008646783,0.0007925299,0.00010580943,0.0005768321],"domain_scores_gemma":[0.9987527,0.0000955275,0.0005843427,0.00045056184,0.0000057121633,0.00011111686],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00028305626,0.0004921243,0.0012462724,0.00020746262,0.00006363828,0.000019899173,0.0006829685,0.00050387566,0.00030047022],"category_scores_gemma":[0.00002403773,0.00044367812,0.00045352624,0.0004430115,0.00031434753,0.000054502874,0.00045301474,0.00028028907,0.003195845],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000011123086,0.0000662109,0.00005508033,0.0003358002,0.000058470006,0.000024861543,0.00009903088,0.00000749159,0.8125563,0.000002042696,0.069257334,0.11752624],"study_design_scores_gemma":[0.00019119788,0.000047866175,0.000055882127,0.00096009293,0.00013896642,0.00005897178,0.000003837043,3.3109697e-7,0.00172541,6.4859273e-7,0.9963451,0.00047169297],"about_ca_topic_score_codex":0.00033540232,"about_ca_topic_score_gemma":0.000098481694,"teacher_disagreement_score":0.9270878,"about_ca_system_score_codex":0.00034437492,"about_ca_system_score_gemma":0.000038816845,"threshold_uncertainty_score":0.9998015},"labels":[],"label_agreement":null},{"id":"W2075689213","doi":"10.1111/j.1574-6968.1997.tb10197.x","title":"Capsaicin as an inhibitor of the growth of the gastric pathogen Helicobacter pylori","year":2006,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Helicobacter pylori-related gastroenterology studies","field":"Medicine","cited_by":158,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"SickKids Foundation; Hospital for Sick Children; University of Toronto","funders":"","keywords":"Capsaicin; Helicobacter pylori; Microbiology; Pathogen; Pharmacology; Chemistry; In vitro; Ingestion; Growth inhibition; Biology; Biochemistry; Receptor","score_opus":0.007004189822095324,"score_gpt":0.20732758174738047,"score_spread":0.20032339192528514,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2075689213","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9831758,0.00013089147,0.000017338747,0.015002769,0.0008974902,0.00051331957,0.0001258238,0.000032445227,0.00010408312],"genre_scores_gemma":[0.99147195,0.000008107789,0.00012962433,0.007817178,0.000309692,0.00001776904,0.00006091965,0.00003231769,0.00015243201],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99806,0.00033436043,0.0006105022,0.00038506446,0.000107749154,0.0005023097],"domain_scores_gemma":[0.99863935,0.000060040715,0.00038547558,0.0006908129,0.0001730936,0.000051202376],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000226061,0.00028874847,0.0005509224,0.00013100564,0.00011509305,0.000004270495,0.00041498267,0.00023165566,0.000027770155],"category_scores_gemma":[0.00009081772,0.00016415746,0.0002595184,0.00039717747,0.0010250035,0.00005177357,0.00022247502,0.00048627213,0.000024191368],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008923042,0.00010082622,0.36378825,0.000017652419,0.00013369037,0.000006277054,0.00019645317,0.000002647736,0.6298001,0.000016015265,0.00581284,0.00003602554],"study_design_scores_gemma":[0.0019518967,0.00044712488,0.7301114,0.0001179677,0.00029265266,0.00049944874,0.00007261156,0.0000014079345,0.26460904,0.000024104133,0.0017288239,0.00014348119],"about_ca_topic_score_codex":0.00043071015,"about_ca_topic_score_gemma":0.000115299634,"teacher_disagreement_score":0.3663232,"about_ca_system_score_codex":0.00008337376,"about_ca_system_score_gemma":0.000059766688,"threshold_uncertainty_score":0.6694147},"labels":[],"label_agreement":null},{"id":"W2076305829","doi":"10.1111/j.1574-6968.2010.01947.x","title":"Biochemical characteristics among<i>Mycobacterium bovis</i>BCG substrains","year":2010,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Tuberculosis Research and Epidemiology","field":"Medicine","cited_by":27,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Mycobacterium bovis; Chemistry; Catalase; Urease; Mycobacterium; Microbiology; Niacin; Hydrogen peroxide; Biochemistry; Hydrolysis; Bacteria; Enzyme; Mycobacterium tuberculosis; Biology; Tuberculosis; Medicine","score_opus":0.010896416122915926,"score_gpt":0.26377073619992547,"score_spread":0.25287432007700955,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2076305829","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9740531,0.00003185997,0.000049545968,0.02381727,0.0011105781,0.000327629,0.00015481848,0.0001353736,0.0003198639],"genre_scores_gemma":[0.97528964,0.000049282236,0.00086138904,0.021214906,0.0010426164,0.0000330547,0.0012213588,0.00004295297,0.0002447888],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9977395,0.00012681991,0.00048659212,0.0005881931,0.00007078479,0.0009881374],"domain_scores_gemma":[0.9985959,0.0001945806,0.00012895007,0.000598758,0.0000849285,0.00039688344],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00041783662,0.00030844274,0.0006385734,0.0001754269,0.00009850409,0.000019310044,0.00027566034,0.0005407287,0.0005454112],"category_scores_gemma":[0.0005618298,0.00022849304,0.00022728922,0.0001483389,0.0011145356,0.00005764784,0.00012232599,0.0014178806,0.000585808],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011322476,0.00007695637,0.16794185,0.000022515573,0.000093965595,0.00010733724,0.00004421739,4.2367418e-8,0.7444118,0.00002068802,0.086829595,0.0003377619],"study_design_scores_gemma":[0.0013141584,0.00022152207,0.6991176,0.00003145403,0.00007890155,0.0015072641,0.000016313044,0.000015696625,0.106535405,0.000008491875,0.1907529,0.00040027505],"about_ca_topic_score_codex":0.000075542965,"about_ca_topic_score_gemma":0.00003218492,"teacher_disagreement_score":0.63787645,"about_ca_system_score_codex":0.00005253651,"about_ca_system_score_gemma":0.000072429415,"threshold_uncertainty_score":0.9317676},"labels":[],"label_agreement":null},{"id":"W2077445390","doi":"10.1111/j.1574-6968.2000.tb08874.x","title":"Isolation and characterization of<i>Francisella novicida</i>mutants defective in lipopolysaccharide biosynthesis","year":2000,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Bacterial Genetics and Biotechnology","field":"Biochemistry, Genetics and Molecular Biology","cited_by":42,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Victoria","funders":"","keywords":"Mutant; Francisella; Transposable element; Biology; Gene; Lipopolysaccharide; Transposon mutagenesis; Biosynthesis; Microbiology; Molecular biology; Francisella tularensis; Genetics; Virulence","score_opus":0.003384673954924032,"score_gpt":0.1833855340071999,"score_spread":0.18000086005227586,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2077445390","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9987959,0.00011124304,0.00015033185,0.0005326522,0.00012218782,0.00017574248,0.000074058364,0.000010012901,0.00002787024],"genre_scores_gemma":[0.99831253,0.00037352106,0.00028801398,0.00072463823,0.000077450255,0.000008432255,0.00017670142,0.000015646658,0.000023043494],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99909043,0.00007006192,0.00024793757,0.00035093294,0.00002004624,0.0002206038],"domain_scores_gemma":[0.9996597,0.000010148071,0.00009365646,0.00018956732,0.00002173193,0.00002516447],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000101298625,0.00015058271,0.000202673,0.0000981183,0.00003293142,0.0000074194863,0.000113349735,0.00031631076,0.000059999627],"category_scores_gemma":[0.0000131340885,0.00014870186,0.000043331933,0.00009103934,0.0001864663,0.0000039920633,0.000043728753,0.000084604166,0.000009507047],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013791004,0.00003052251,0.007454285,0.0000065176832,0.000026392727,0.0000014864312,0.00004159935,0.0000035456937,0.98185676,0.000005443183,0.00001808034,0.010417477],"study_design_scores_gemma":[0.00040973083,0.00013006495,0.02746895,0.000013573219,0.000011487409,0.000033787164,0.0000075105963,0.000015962021,0.96900517,0.000006847784,0.0027349854,0.00016194514],"about_ca_topic_score_codex":0.00003687611,"about_ca_topic_score_gemma":0.000048680016,"teacher_disagreement_score":0.020014664,"about_ca_system_score_codex":0.000009999444,"about_ca_system_score_gemma":0.000014373096,"threshold_uncertainty_score":0.60638857},"labels":[],"label_agreement":null},{"id":"W2078258181","doi":"10.1111/j.1574-6968.2012.02660.x","title":"A novel function for the competence inducing peptide, XIP, as a cell death effector of<i>Streptococcus mutans</i>","year":2012,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Oral microbiology and periodontitis research","field":"Dentistry","cited_by":49,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University; University of Toronto","funders":"National Institute of Dental and Craniofacial Research; Canadian Institutes of Health Research; National Institutes of Health","keywords":"Biology; Cell biology; Effector; Streptococcus mutans; Transcription factor; Sigma factor; Regulation of gene expression; Population; Gene; Genetics; Gene expression; Promoter; Bacteria","score_opus":0.02414380002886196,"score_gpt":0.2743230209806974,"score_spread":0.2501792209518354,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2078258181","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98947656,0.00078090857,0.0054074815,0.0004442521,0.002163654,0.0010102349,0.00048505721,0.000049190377,0.00018264237],"genre_scores_gemma":[0.99598575,0.000010415876,0.0006611642,0.001986891,0.0004084759,0.00016216074,0.00023738272,0.000032626765,0.0005151226],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9982135,0.00020605317,0.00036601775,0.0003887079,0.000053745618,0.00077196164],"domain_scores_gemma":[0.99830985,0.00085790816,0.0002091698,0.00043862185,0.00010506091,0.00007939808],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006405118,0.00026322188,0.00037503793,0.0001061176,0.00031322366,0.000029267392,0.00044995223,0.0003104109,0.00041808235],"category_scores_gemma":[0.00011995464,0.00019440649,0.00022183904,0.00020303235,0.00042314318,0.00014358618,0.0001506801,0.0004799349,0.00061136286],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00020985417,0.00009859689,0.07203752,0.000061108294,0.00012955298,0.0000037938141,0.00018905975,0.0000135229775,0.9143074,0.00007353792,0.012648561,0.00022749067],"study_design_scores_gemma":[0.0035712358,0.000601897,0.18162844,0.000114338516,0.00023703836,0.00080556306,0.00030589048,0.000020634796,0.7062001,0.000012610211,0.10581874,0.00068351184],"about_ca_topic_score_codex":0.00038210882,"about_ca_topic_score_gemma":0.000080021,"teacher_disagreement_score":0.20810731,"about_ca_system_score_codex":0.00006202192,"about_ca_system_score_gemma":0.000054806413,"threshold_uncertainty_score":0.79276663},"labels":[],"label_agreement":null},{"id":"W2078362935","doi":"10.1016/j.femsle.2004.12.033","title":"Transformation of<i>Coniothyrium minitans</i>, a parasite of<i>Sclerotinia sclerotiorum</i>, with<i>Agrobacterium tumefaciens</i>","year":2005,"lang":"he","type":"article","venue":"FEMS Microbiology Letters","topic":"Plant pathogens and resistance mechanisms","field":"Agricultural and Biological Sciences","cited_by":61,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Natural Science Foundation of China; China Agricultural University; University of Guelph; University of Kentucky","keywords":"Biology; Sclerotinia sclerotiorum; Transformation (genetics); Mutant; Agrobacterium tumefaciens; Agrobacterium; Insertional mutagenesis; Genetics; Microbiology; Gene; Botany","score_opus":0.009468318080291815,"score_gpt":0.1830947975995962,"score_spread":0.1736264795193044,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2078362935","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9888109,0.0005480241,0.0002008668,0.0064082704,0.0005217035,0.0007514111,0.0024537367,0.000051906667,0.00025316197],"genre_scores_gemma":[0.9953076,0.0002878854,0.0013031974,0.0020512112,0.0003211148,0.000018270352,0.0004984603,0.000009314539,0.00020291778],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99685186,0.000265155,0.0011005474,0.0006763473,0.00019104884,0.00091502944],"domain_scores_gemma":[0.99849373,0.00015438504,0.0007853011,0.00023253173,0.00017410294,0.00015996875],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0005071873,0.00056046614,0.0009541415,0.00009506697,0.00023429886,0.000042126267,0.0005908643,0.0004443102,0.00030008532],"category_scores_gemma":[0.0000114119375,0.00027403518,0.00036586222,0.00056921574,0.0007497232,0.0002151514,0.00006120741,0.00034382573,0.000093847884],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00034063868,0.00022039139,0.0020660881,0.00009425816,0.00013437487,0.000010386459,0.00088653737,0.000113811,0.992216,0.00011742763,0.0007754832,0.0030245895],"study_design_scores_gemma":[0.001864375,0.001419013,0.043855764,0.0006602586,0.00026456438,0.00033799448,0.0010101084,0.000041527874,0.9098201,0.000008707755,0.039620455,0.0010971276],"about_ca_topic_score_codex":0.00010290505,"about_ca_topic_score_gemma":0.0007178433,"teacher_disagreement_score":0.08239591,"about_ca_system_score_codex":0.000058836777,"about_ca_system_score_gemma":0.000039807433,"threshold_uncertainty_score":0.9999712},"labels":[],"label_agreement":null},{"id":"W2079479993","doi":"10.1111/j.1574-6968.1997.tb12693.x","title":"Mineralization of p-nitrophenol by pentachlorophenol-degrading Sphingomonas spp.","year":2006,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":62,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"Natural Sciences and Engineering Research Council of Canada; Région Normandie","keywords":"Pentachlorophenol; Nitrophenol; Chemistry; Mineralization (soil science); Nitrite; 4-Nitrophenol; Sphingomonas paucimobilis; Biodegradation; Sphingomonas; Nuclear chemistry; Food science; Chromatography; Environmental chemistry; Biochemistry; Bacteria; Nitrogen; Biology; Organic chemistry; Catalysis","score_opus":0.003490199419019949,"score_gpt":0.17218010064379316,"score_spread":0.1686899012247732,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2079479993","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9971989,0.000045853565,0.00038163894,0.0009289617,0.00024974343,0.00016982983,0.00009326653,0.000039269675,0.0008925486],"genre_scores_gemma":[0.99627364,0.000009149404,0.0008114761,0.0018001636,0.00006095728,0.0000024608453,0.0004537408,0.000016041744,0.00057238655],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9989191,0.0000629008,0.00033258123,0.00031354808,0.00007099914,0.000300856],"domain_scores_gemma":[0.9995706,0.000020967549,0.00019858734,0.000164517,0.0000076477145,0.00003764928],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00010852455,0.00017146757,0.00018566281,0.000041312418,0.00007580096,0.000013141287,0.00021795336,0.00010587555,0.0018785045],"category_scores_gemma":[0.000009974876,0.0001546986,0.00006778666,0.00019089117,0.000282075,0.000092643764,0.00007819258,0.00009070745,0.0004682388],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000135109585,0.00004650572,0.053553846,0.0000031002003,0.0000065123118,0.0000017349664,0.000043074237,0.0000715521,0.81154495,0.000011916082,0.13459943,0.000103838174],"study_design_scores_gemma":[0.0008950766,0.000051807892,0.023368496,0.000011497162,0.00002071119,0.00002547642,0.000023823164,0.000038572263,0.91551226,0.000025919984,0.059651557,0.0003747732],"about_ca_topic_score_codex":0.0012480546,"about_ca_topic_score_gemma":0.00010323079,"teacher_disagreement_score":0.1039673,"about_ca_system_score_codex":0.00010768363,"about_ca_system_score_gemma":0.0000039730503,"threshold_uncertainty_score":0.9990339},"labels":[],"label_agreement":null},{"id":"W2079912143","doi":"10.1111/j.1574-6968.2005.00054.x","title":"Proteomic analysis of the bacteriocin thuricin 17 produced by<i>Bacillus thuringiensis</i>NEB17","year":2005,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Probiotics and Fermented Foods","field":"Agricultural and Biological Sciences","cited_by":54,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill Genome Centre; McGill University","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Bacteriocin; Bacillus thuringiensis; Edman degradation; Mass spectrometry; Biology; Chemistry; Microbiology; Lantibiotics; Bacillales; Biochemistry; Peptide sequence; Chromatography; Bacteria; Antimicrobial; Gene; Genetics","score_opus":0.006596112028859378,"score_gpt":0.17888703595000313,"score_spread":0.17229092392114376,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2079912143","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98454624,0.00009839713,0.0000033452216,0.014474156,0.00014027992,0.00037653622,0.0002571481,0.00003514785,0.00006874558],"genre_scores_gemma":[0.9957661,0.000013767369,0.000067554494,0.003613595,0.000111389,0.000013292228,0.00015516269,0.0000016805654,0.00025745307],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99864084,0.00012555416,0.00034190656,0.00042462783,0.000065499786,0.00040160248],"domain_scores_gemma":[0.9994541,0.000042652515,0.00023184255,0.0001857432,0.00003929005,0.000046385787],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00022657818,0.00020223454,0.0003530341,0.00003737878,0.00017419457,0.000023880084,0.0005385953,0.0001396941,0.00017949112],"category_scores_gemma":[0.000019020137,0.00007090666,0.00028785903,0.0007138064,0.0002279188,0.000052494783,0.00016140651,0.00019575394,0.000019755993],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000018937999,0.00006959106,0.006661946,0.0000022012919,0.00025779186,4.3992463e-7,0.00007082901,0.00004747356,0.9853493,0.000006228337,0.0041241576,0.0033911152],"study_design_scores_gemma":[0.00023919562,0.000120854456,0.13669018,0.000017692713,0.0002947004,0.000011163521,0.000022635084,0.000044494413,0.83178085,0.0000024916942,0.030465025,0.00031070627],"about_ca_topic_score_codex":0.00007895826,"about_ca_topic_score_gemma":0.00008983923,"teacher_disagreement_score":0.15356843,"about_ca_system_score_codex":0.00005073299,"about_ca_system_score_gemma":0.0000072738912,"threshold_uncertainty_score":0.289149},"labels":[],"label_agreement":null},{"id":"W2080313712","doi":"10.1111/j.1574-6968.2009.01658.x","title":"Assemblies of DegP underlie its dual chaperone and protease function","year":2009,"lang":"en","type":"review","venue":"FEMS Microbiology Letters","topic":"Heat shock proteins research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":15,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Centre National de la Recherche Scientifique; Department of Education of Guangdong Province; Institut national de la recherche scientifique","keywords":"Periplasmic space; Chaperone (clinical); Proteases; Protease; Heat shock protein; Protein folding; Biochemistry; Escherichia coli; Dual function; Cell biology; Chemistry; Biology; Enzyme","score_opus":0.03641437441142872,"score_gpt":0.30862406487554456,"score_spread":0.27220969046411586,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2080313712","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.018269429,0.9795674,0.00019542701,0.00026356487,0.00012926874,0.0013743971,0.00011736222,0.00001661923,0.000066499415],"genre_scores_gemma":[0.0020144214,0.9953464,0.00020275547,0.00046773534,0.00031369357,0.00015346453,0.0011071761,0.000058667432,0.0003356851],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9978296,0.0004049103,0.000494307,0.00071314414,0.00007170627,0.0004863165],"domain_scores_gemma":[0.9991051,0.000034126577,0.00023139796,0.00045653115,0.00007105557,0.00010182047],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0003331758,0.00043041032,0.00094801444,0.00021279587,0.0000848716,0.000019197138,0.00024703043,0.00078059494,0.000026634003],"category_scores_gemma":[0.00008642529,0.0003682624,0.00023262564,0.00014389404,0.00026881945,0.0000047467465,0.00023804698,0.00041182424,0.00004010607],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000043044693,0.000049696875,0.0000059180525,0.0021017964,0.00024396666,0.000011780639,0.0000073327988,6.262522e-7,0.7883581,0.000012511993,0.003110795,0.20605445],"study_design_scores_gemma":[0.00033463814,0.0005918923,0.000019433504,0.00082986965,0.00015664104,0.0002726111,0.000004972562,3.352956e-7,0.011986209,0.000002419486,0.985413,0.00038793852],"about_ca_topic_score_codex":0.000009887464,"about_ca_topic_score_gemma":0.000007909169,"teacher_disagreement_score":0.98230225,"about_ca_system_score_codex":0.000042081487,"about_ca_system_score_gemma":0.00022062857,"threshold_uncertainty_score":0.9998769},"labels":[],"label_agreement":null},{"id":"W2083563376","doi":"10.1111/j.1574-6968.2003.tb11536.x","title":"The<i>wbiA</i>locus is required for the 2-<i>O</i>-acetylation of lipopolysaccharides expressed by<i>Burkholderia pseudomallei</i>and<i>Burkholderia thailandensis</i>","year":2003,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Burkholderia infections and melioidosis","field":"Medicine","cited_by":33,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary; Health Sciences Centre","funders":"","keywords":"Burkholderia pseudomallei; Burkholderia; Microbiology; Acetylation; Mutant; Biology; Monoclonal antibody; Chemistry; Bacteria; Molecular biology; Antibody; Gene; Genetics","score_opus":0.013707520110763526,"score_gpt":0.237117239667292,"score_spread":0.22340971955652847,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2083563376","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9672399,0.004180034,0.00413817,0.020749709,0.0015573822,0.0017198309,0.00016691077,0.00009794573,0.00015010085],"genre_scores_gemma":[0.987499,0.0014694984,0.00076524843,0.008861382,0.00022484298,0.00034505932,0.00007410036,0.000070968694,0.0006899003],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9978811,0.0001653079,0.0006634252,0.0005631178,0.0001118694,0.0006151692],"domain_scores_gemma":[0.9977805,0.0008045442,0.00036840604,0.0007653468,0.00016839094,0.00011279407],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007299937,0.00038288746,0.0005754032,0.00009648847,0.0006682638,0.00006807142,0.0002306311,0.00028115985,0.00007209331],"category_scores_gemma":[0.00023479173,0.00024256187,0.0002955295,0.00026171462,0.0007361176,0.000108495675,0.000062442865,0.0002815496,0.000011287273],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00021559394,0.00006581952,0.00076538057,0.000041439784,0.00029142297,0.0000014971242,0.00028979604,0.000005093223,0.8699631,0.00021913956,0.12729985,0.0008418818],"study_design_scores_gemma":[0.0027852987,0.00023176004,0.00030311185,0.00006458968,0.00031969266,0.00019181392,0.00025616735,0.000026127991,0.68926775,0.00006472601,0.30622685,0.00026210974],"about_ca_topic_score_codex":0.00012802004,"about_ca_topic_score_gemma":0.000020818821,"teacher_disagreement_score":0.18069533,"about_ca_system_score_codex":0.000046439563,"about_ca_system_score_gemma":0.00007550952,"threshold_uncertainty_score":0.9891386},"labels":[],"label_agreement":null},{"id":"W2083637418","doi":"10.1111/1574-6968.12078","title":"The ecological habitat and transmission of<i>Escherichia coli</i>O157:H7","year":2013,"lang":"en","type":"review","venue":"FEMS Microbiology Letters","topic":"Escherichia coli research studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":103,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institut National de la Recherche Scientifique; Université de Montréal","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Escherichia coli; Outbreak; Biology; Diarrhea; Waterborne diseases; Adaptation (eye); Pathogen; Shiga toxin; Microbiology; Food safety; Transmission (telecommunications); Environmental health; Virology; Medicine; Food science; Genetics; Gene","score_opus":0.01960067912872095,"score_gpt":0.2841962890800591,"score_spread":0.2645956099513382,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2083637418","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.01764467,0.98006094,0.00006203802,0.00076004,0.00021981304,0.0010624451,0.000058829213,0.0000143488405,0.00011685187],"genre_scores_gemma":[0.00016675162,0.99747485,0.00066481304,0.0006049819,0.00016839444,0.00028807585,0.00020337338,0.000048851398,0.00037992458],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9974275,0.000670627,0.0005694336,0.00065515813,0.000069050766,0.00060819037],"domain_scores_gemma":[0.9987193,0.00031089006,0.000304219,0.00048174392,0.00007634876,0.00010753616],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00043250425,0.0005006435,0.0010974917,0.000056190973,0.0002752294,0.000034686724,0.0006051535,0.00064848596,0.000014280071],"category_scores_gemma":[0.00015351205,0.00029215319,0.00040082016,0.00013874087,0.0012417376,0.0000031061952,0.000447864,0.00053317455,0.00002421659],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00003514608,0.00006592852,0.00004944596,0.0017050318,0.0007447328,0.000007888879,0.000024270978,4.7665034e-7,0.7352123,0.00002172298,0.048770305,0.21336271],"study_design_scores_gemma":[0.00021596675,0.00025077685,0.000055810626,0.00034578567,0.00014495011,0.000040835686,0.00001188206,6.4187515e-7,0.0007332728,0.00000387761,0.99787956,0.0003166638],"about_ca_topic_score_codex":0.000010053688,"about_ca_topic_score_gemma":0.000014680417,"teacher_disagreement_score":0.94910926,"about_ca_system_score_codex":0.000029353983,"about_ca_system_score_gemma":0.00014554334,"threshold_uncertainty_score":0.99995303},"labels":[],"label_agreement":null},{"id":"W2084181607","doi":"10.1111/j.1574-6968.2008.01420.x","title":"Noncellulosomal cohesin- and dockerin-like modules in the three domains of life","year":2008,"lang":"en","type":"review","venue":"FEMS Microbiology Letters","topic":"Bacterial Genetics and Biotechnology","field":"Biochemistry, Genetics and Molecular Biology","cited_by":71,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Queen's University","funders":"Canadian Institutes of Health Research; Israel Science Foundation","keywords":"Cohesin; Cellulosome; Biology; Archaea; Proteome; Genetics; Computational biology; Bacteria; Gene; Biochemistry; Clostridium thermocellum; Cellulase; Chromatin; Enzyme","score_opus":0.014626009265843289,"score_gpt":0.23036715427261029,"score_spread":0.215741145006767,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2084181607","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.20562588,0.79296976,0.000029977866,0.00040423073,0.0003009962,0.000487406,0.00015739625,0.000007413241,0.000016945423],"genre_scores_gemma":[0.004967909,0.99280083,0.00036927793,0.0008995491,0.00026234356,0.000046312587,0.0005980514,0.000040189083,0.000015562777],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9981778,0.000232637,0.0005257942,0.00061686075,0.000042532694,0.00040436574],"domain_scores_gemma":[0.99890286,0.000046686786,0.0003398393,0.0006463643,0.000021577933,0.00004265879],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00014723062,0.00044084332,0.0010246207,0.00013461779,0.000065000786,0.000012346362,0.00069649913,0.001043507,0.000004656781],"category_scores_gemma":[0.000028558778,0.0003039845,0.00022587001,0.00014772703,0.0008931357,0.0000015428274,0.00032559395,0.0003751387,0.0000079339525],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000056699904,0.000110283334,0.00021666785,0.0009768177,0.0003589357,0.000046896213,0.00004168389,0.0000017829817,0.90436345,0.000044658256,0.008881602,0.08490052],"study_design_scores_gemma":[0.00035824545,0.00022658681,0.00013159133,0.00023989902,0.00007445933,0.000557975,0.0000070532355,2.7965922e-7,0.0012334759,0.0000045264087,0.9968186,0.0003472825],"about_ca_topic_score_codex":0.000027874674,"about_ca_topic_score_gemma":0.000112776994,"teacher_disagreement_score":0.98793703,"about_ca_system_score_codex":0.000013918326,"about_ca_system_score_gemma":0.00010088043,"threshold_uncertainty_score":0.99994123},"labels":[],"label_agreement":null},{"id":"W2088038333","doi":"10.1111/j.1574-6968.2006.00523.x","title":"Peptidoglycan lytic activity of the<i>Pseudomonas aeruginosa</i>phage ÏKZ gp144 lytic transglycosylase","year":2006,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Bacteriophages and microbial interactions","field":"Environmental Science","cited_by":56,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"Fonds Québécois de la Recherche sur la Nature et les Technologies; Université Laval","keywords":"Lytic cycle; Peptidoglycan; Lysin; Lysis; Escherichia coli; Biochemistry; Biology; Bacterial cell structure; Calcein; Bacteria; Pseudomonas aeruginosa; Microbiology; Membrane; Chemistry; Bacteriophage; Enzyme; Gene","score_opus":0.004237225943468276,"score_gpt":0.18445568072326946,"score_spread":0.18021845477980117,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2088038333","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9942905,0.000023319382,0.00034159672,0.0030113258,0.0006289512,0.00032723366,0.0001364762,0.000045007277,0.0011956082],"genre_scores_gemma":[0.99649704,0.0000047867384,0.00019055902,0.001752976,0.0000964183,0.0000143579155,0.00002862526,0.000026308237,0.0013889612],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99849635,0.00013957541,0.00033178952,0.0004539049,0.00006992726,0.00050845003],"domain_scores_gemma":[0.99916273,0.00007503884,0.00021494016,0.0004805951,0.000008597771,0.00005811266],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00012361899,0.00027664882,0.00029843606,0.000048427366,0.0002034147,0.000022091801,0.0004745866,0.00014391712,0.0011086746],"category_scores_gemma":[0.000010236705,0.00021921656,0.0002772514,0.00024187328,0.0007829846,0.0001707642,0.0001690006,0.00033260256,0.00040721922],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000036472637,0.0001452466,0.0021206038,0.000008935758,0.00002284224,0.000011601124,0.000144195,0.00020725037,0.9828328,0.000011075848,0.014096247,0.00036273227],"study_design_scores_gemma":[0.00090219075,0.00007813518,0.10411399,0.000039300565,0.0000868707,0.00030479033,0.000028724136,0.000028626311,0.8460721,0.000026663169,0.0478835,0.00043514706],"about_ca_topic_score_codex":0.0021847638,"about_ca_topic_score_gemma":0.0012729465,"teacher_disagreement_score":0.13676073,"about_ca_system_score_codex":0.00022138908,"about_ca_system_score_gemma":0.000017438251,"threshold_uncertainty_score":0.99980444},"labels":[],"label_agreement":null},{"id":"W2088903387","doi":"10.1111/j.1574-6968.2006.00211.x","title":"New models for circadian systems in microorganisms","year":2006,"lang":"en","type":"review","venue":"FEMS Microbiology Letters","topic":"Circadian rhythm and melatonin","field":"Neuroscience","cited_by":16,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"York University","funders":"","keywords":"Circadian rhythm; Biology; Neurospora; Bacterial circadian rhythms; Transcription (linguistics); Circadian clock; Gene; Genetics; Cell biology; Neurospora crassa; Neuroscience; Mutant","score_opus":0.047946085227689096,"score_gpt":0.27529876265252823,"score_spread":0.22735267742483914,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2088903387","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00016268574,0.99109393,0.0023563667,0.0002496093,0.0026251203,0.0025276504,0.00064754754,0.000109263725,0.00022782698],"genre_scores_gemma":[0.00008922194,0.992703,0.00043187066,0.0022715256,0.0009941485,0.0003245765,0.00052501925,0.00022862318,0.0024320104],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.99625146,0.00032110754,0.0009710706,0.0013078132,0.00005626012,0.0010923144],"domain_scores_gemma":[0.99830306,0.00046861664,0.00044897504,0.00059732405,0.000013030842,0.0001689714],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00022460365,0.00071132445,0.0019796637,0.0006358878,0.00011260084,0.00009036065,0.00073878607,0.000908562,0.000017534589],"category_scores_gemma":[0.00004914367,0.00067190325,0.0005685353,0.0004520764,0.00016846696,0.0001145719,0.00008590272,0.00066285994,0.00036767183],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000024943914,0.00013058771,0.000008058553,0.012070474,0.00012272273,0.00059242954,0.0003858412,0.00055834313,0.40482917,0.0142471455,0.27949792,0.28753236],"study_design_scores_gemma":[0.000522309,0.000023854876,5.8236833e-7,0.0020386605,0.00011090513,0.0009787609,0.0000027986061,0.000010541586,0.00117503,0.000032626645,0.9944197,0.0006842268],"about_ca_topic_score_codex":0.00026310384,"about_ca_topic_score_gemma":0.000034145938,"teacher_disagreement_score":0.7149218,"about_ca_system_score_codex":0.00038924257,"about_ca_system_score_gemma":0.0004000086,"threshold_uncertainty_score":0.99957323},"labels":[],"label_agreement":null},{"id":"W2089594998","doi":"10.1111/j.1574-6968.2008.01449.x","title":"Roundup Ready<sup>®</sup>soybean gene concentrations in field soil aggregate size classes","year":2008,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Genetically Modified Organisms Research","field":"Agricultural and Biological Sciences","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Recombinant DNA; Gene; Bacteria; Transformation (genetics); Glyphosate; Biology; Botany; Chemistry; Genetics; Agronomy","score_opus":0.02616160545883078,"score_gpt":0.22791422896771166,"score_spread":0.20175262350888087,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2089594998","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98061913,0.00014635974,0.000017825541,0.018415326,0.00010599327,0.00026838912,0.000059335263,0.00006640064,0.0003012364],"genre_scores_gemma":[0.9921335,0.00015711233,0.0003602909,0.006479057,0.00021593686,0.000024371884,0.00017988634,0.0000030227936,0.00044683827],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9980633,0.0002483752,0.00034400108,0.0005177207,0.00009738488,0.0007291911],"domain_scores_gemma":[0.9989216,0.0006946007,0.00006833673,0.00013597458,0.000055340293,0.00012419252],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00017088854,0.00021983328,0.00027257437,0.000027050975,0.00027695298,0.00004175638,0.00046274767,0.00026093086,0.0006451021],"category_scores_gemma":[0.00018020943,0.00010749465,0.00008564042,0.0003002958,0.00036718108,0.00008218134,0.0001253898,0.00038821972,0.00036564443],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000027880233,0.0000648474,0.022576243,0.0000019905829,0.00001578476,0.0000844822,0.00015255103,0.000079412974,0.9696322,0.000035772708,0.006521664,0.000807183],"study_design_scores_gemma":[0.001002138,0.00056804914,0.16120045,0.000031105013,0.000015842328,0.0005633598,0.00030882336,0.000118669224,0.8037581,0.000116856536,0.031506255,0.0008103696],"about_ca_topic_score_codex":0.00081346434,"about_ca_topic_score_gemma":0.0010062093,"teacher_disagreement_score":0.16587411,"about_ca_system_score_codex":0.0000681767,"about_ca_system_score_gemma":0.000033494674,"threshold_uncertainty_score":0.70634156},"labels":[],"label_agreement":null},{"id":"W2091704738","doi":"10.1111/j.1574-6968.2000.tb09402.x","title":"Demonstration of intracellular<i>Staphylococcus aureus</i>in bovine mastitis alveolar cells and macrophages isolated from naturally infected cow milk","year":2000,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Milk Quality and Mastitis in Dairy Cows","field":"Agricultural and Biological Sciences","cited_by":133,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal","funders":"Natural Sciences and Engineering Research Council of Canada; Dairy Farmers of Canada","keywords":"Staphylococcus aureus; Microbiology; Cell sorting; Biology; Intracellular; Extracellular; Mastitis; Cell culture; In vitro; Bacteria; Molecular biology; Flow cytometry; Cell biology; Biochemistry","score_opus":0.005460578958499013,"score_gpt":0.18054149779117803,"score_spread":0.175080918832679,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2091704738","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9958337,0.00096793077,0.000025922878,0.001946507,0.0001885638,0.00026000856,0.0006478108,0.000049649818,0.00007988398],"genre_scores_gemma":[0.99669075,0.0003248902,0.00033274517,0.0016234214,0.00010537843,0.0000069470375,0.0007947133,0.000002149197,0.000118998534],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99848497,0.00026719758,0.00043137872,0.00042039706,0.000055680077,0.00034036118],"domain_scores_gemma":[0.99945605,0.00022779043,0.00013148587,0.0000884384,0.000033254397,0.000062979125],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00016977466,0.00022226614,0.00033264302,0.000030971743,0.00008191976,0.000028401251,0.00023148942,0.00027670208,0.0014259161],"category_scores_gemma":[0.000017215565,0.00011830053,0.00007515017,0.00023639503,0.0003080438,0.000112081,0.000052263244,0.00029030212,0.000036356803],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011854483,0.00005781636,0.008382832,0.000007891824,0.000028084449,0.00003270192,0.000112932394,0.000023114279,0.9800477,0.000013597258,0.002073321,0.009101477],"study_design_scores_gemma":[0.002049245,0.00094113074,0.27484402,0.00020720313,0.00007473441,0.000056090386,0.0001472798,0.0002093132,0.67846143,0.00024521997,0.04168765,0.0010766999],"about_ca_topic_score_codex":0.0014752515,"about_ca_topic_score_gemma":0.0030000894,"teacher_disagreement_score":0.30158627,"about_ca_system_score_codex":0.000019989257,"about_ca_system_score_gemma":0.000007625432,"threshold_uncertainty_score":0.9994869},"labels":[],"label_agreement":null},{"id":"W2091866722","doi":"10.1111/j.1574-6968.2011.02464.x","title":"Decoding the roles of pilotins and accessory proteins in secretin escort services","year":2011,"lang":"en","type":"review","venue":"FEMS Microbiology Letters","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":64,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hospital for Sick Children; McMaster University; University of Toronto","funders":"Canadian Institutes of Health Research","keywords":"Secretin; Biology; Cell biology; Membrane; Bacterial outer membrane; Flagellum; Bacteria; Biochemistry; Gene; Genetics; Escherichia coli; Secretion","score_opus":0.030823795224154824,"score_gpt":0.2696674487979842,"score_spread":0.2388436535738294,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2091866722","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.15092582,0.84711933,0.000004561886,0.000103050996,0.00078877265,0.0008302445,0.00013565195,0.00003417992,0.000058394045],"genre_scores_gemma":[0.0063303076,0.99262303,0.000035650093,0.0001842299,0.00008519536,0.00015908811,0.00044258893,0.00004489235,0.00009502465],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9976934,0.00062436785,0.0007638739,0.0004855515,0.0000053609424,0.00042739965],"domain_scores_gemma":[0.9987305,0.00021269264,0.00060763245,0.00040558554,0.000028887147,0.000014732845],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00037861167,0.00044998838,0.0013767612,0.00031364372,0.00015184717,0.000019058869,0.00053761847,0.0006813838,0.00023262984],"category_scores_gemma":[0.000018374525,0.00028733027,0.00022576153,0.00020268282,0.00039589152,0.00007531854,0.00031860397,0.000688139,0.00008460405],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010026144,0.00021411043,0.0024689706,0.007066667,0.0011865975,0.000006043032,0.0012743945,3.160273e-7,0.7026928,0.00030847813,0.0011188233,0.28356254],"study_design_scores_gemma":[0.0004151558,0.000087499466,0.00041816823,0.0031379922,0.00029388384,0.00037410864,0.00006590024,4.3518572e-8,0.0014695931,0.000007961399,0.9933777,0.00035199503],"about_ca_topic_score_codex":0.0004607881,"about_ca_topic_score_gemma":0.0010576503,"teacher_disagreement_score":0.99225885,"about_ca_system_score_codex":0.000031895433,"about_ca_system_score_gemma":0.000057042773,"threshold_uncertainty_score":0.99995786},"labels":[],"label_agreement":null},{"id":"W2092026393","doi":"10.1111/j.1574-6968.2002.tb10989.x","title":"The triazine hydrolase gene<i>trz</i>N from<i>Nocardioides</i>sp. strain C190: Cloning and construction of gene-specific primers","year":2002,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Pesticide and Herbicide Environmental Studies","field":"Environmental Science","cited_by":117,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Agriculture and Agri-Food Canada","funders":"","keywords":"Transposase; Biology; Molecular biology; Gene; Nucleic acid sequence; Rhodococcus; Escherichia coli; Actinomycetales; Molecular cloning; Transposable element; Microbiology; Peptide sequence; Biochemistry; Streptomyces; Genetics; Bacteria; Mutant","score_opus":0.010123128346574957,"score_gpt":0.1758248142340659,"score_spread":0.16570168588749096,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2092026393","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9940685,0.0028547912,0.00032986334,0.0017322343,0.0002792366,0.00021955947,0.00011931294,0.0000254007,0.00037111287],"genre_scores_gemma":[0.9904007,0.0014921054,0.0063827736,0.0014488535,0.00011844384,0.000018459737,0.000052374227,0.000022984224,0.000063317835],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9985847,0.00012701588,0.00036242956,0.00044099145,0.00009051153,0.0003943851],"domain_scores_gemma":[0.99928963,0.00018538382,0.00018343951,0.00027112383,0.0000026112643,0.00006778068],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00020730452,0.00023067166,0.00030139682,0.000026389365,0.0003615269,0.00001995506,0.00020988825,0.00010003729,0.0006333941],"category_scores_gemma":[0.000014973322,0.00018116899,0.000095127376,0.00009898149,0.0017351038,0.000086159984,0.00016775841,0.00021344023,0.00017545496],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00002926515,0.0000186763,0.025953386,0.0000012169885,0.000075499294,0.000011705265,0.000269445,0.0001741311,0.964348,0.000005985254,0.0038317787,0.0052808775],"study_design_scores_gemma":[0.0032649154,0.00028216923,0.24706891,0.00003513518,0.00020556957,0.00040484837,0.0006304223,0.00016265265,0.63574475,0.00032313692,0.11086261,0.0010148603],"about_ca_topic_score_codex":0.000248103,"about_ca_topic_score_gemma":0.000039253126,"teacher_disagreement_score":0.32860327,"about_ca_system_score_codex":0.00010971268,"about_ca_system_score_gemma":0.0000017551583,"threshold_uncertainty_score":0.7387857},"labels":[],"label_agreement":null},{"id":"W2092343365","doi":"10.1111/1574-6968.12331","title":"Antibacterial activity of gemini quaternary ammonium salts","year":2013,"lang":"en","type":"letter","venue":"FEMS Microbiology Letters","topic":"Antimicrobial agents and applications","field":"Chemistry","cited_by":72,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Institute of Genetics","keywords":"Staphylococcus epidermidis; Ammonium; Antibacterial activity; Chemistry; Staphylococcus aureus; Pseudomonas aeruginosa; Escherichia coli; Bacteria; Biofilm; Hydrocarbon; Microbiology; Nuclear chemistry; Organic chemistry; Biochemistry; Biology","score_opus":0.012511174833616554,"score_gpt":0.21951199210622868,"score_spread":0.20700081727261213,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2092343365","genre_codex":"empirical","genre_gemma":"commentary","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.75288004,0.000027669857,0.000060768038,0.24412048,0.0007781865,0.0002119897,0.0013083417,0.00009780248,0.00051474833],"genre_scores_gemma":[0.29771107,0.00012761563,0.00071239995,0.67066437,0.01062537,0.00014110006,0.01037814,0.00030136041,0.009338573],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9977255,0.0000686227,0.00057643396,0.00082972687,0.00007997203,0.00071973907],"domain_scores_gemma":[0.9981062,0.0001142338,0.0007710088,0.0008914921,0.0000628153,0.000054296725],"candidate_categories":["metaepi_narrow","research_integrity","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0000643237,0.00058964035,0.0008514083,0.000116462914,0.00011369323,0.00004206487,0.0008809278,0.0015036262,0.0025069718],"category_scores_gemma":[0.000009476222,0.0005501766,0.000353847,0.00008333015,0.00057898276,0.0000830403,0.00029220645,0.0015850753,0.0006225796],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00002081917,0.000034050416,0.00013043098,0.00012440591,0.00011736762,0.000029839002,0.000023245897,4.3593403e-7,0.51208806,6.5831773e-7,0.48724845,0.00018222185],"study_design_scores_gemma":[0.0003043781,0.000012940906,0.00009385389,0.0000939224,0.00007181584,0.00006961807,0.0000023366501,0.0000019187312,0.3973301,0.0000030579906,0.60158247,0.00043359157],"about_ca_topic_score_codex":0.00059343857,"about_ca_topic_score_gemma":0.0000045055244,"teacher_disagreement_score":0.45516893,"about_ca_system_score_codex":0.000089246656,"about_ca_system_score_gemma":0.0000604076,"threshold_uncertainty_score":0.99979264},"labels":[],"label_agreement":null},{"id":"W2093292138","doi":"10.1111/j.1574-6968.2002.tb11369.x","title":"The identification of five genetic loci of<i>Francisella novicida</i>associated with intracellular growth","year":2002,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Bacillus and Francisella bacterial research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":175,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Victoria","funders":"","keywords":"Francisella; Biology; Francisella tularensis; Gene; Operon; Transposable element; Mutant; Genetics; Heat shock protein; Molecular biology; Virulence","score_opus":0.005899891317554644,"score_gpt":0.19042530718611628,"score_spread":0.18452541586856164,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2093292138","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9967107,0.0014839034,0.00074759143,0.0005412893,0.0001290413,0.00024355273,0.00007406046,0.0000058971764,0.00006393579],"genre_scores_gemma":[0.9988183,0.00037691134,0.00007648197,0.00019654026,0.000072728515,0.000014163205,0.00015023003,0.000020676112,0.0002739951],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99873745,0.00014948515,0.00041859338,0.00029719717,0.00007598939,0.00032130434],"domain_scores_gemma":[0.9990174,0.000057170684,0.0003027901,0.00036442786,0.00021845526,0.00003976589],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00029939518,0.00015253319,0.00021209629,0.000042527685,0.00010908173,0.000013024901,0.00034212825,0.00016985815,0.000034305132],"category_scores_gemma":[0.00013348399,0.00010898864,0.00008977318,0.00016000336,0.0006623008,0.0000027668755,0.000063208485,0.00011834661,0.0000145997565],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010013468,0.000055289744,0.0014149612,0.000013446514,0.00013793474,0.0000025717945,0.000090269765,0.000041522006,0.99452704,0.00001542514,0.0027445008,0.0008568966],"study_design_scores_gemma":[0.0007972294,0.0002594478,0.00488343,0.00001389407,0.000032293672,0.000017928276,0.000026279364,0.00009975675,0.9882269,0.000010055718,0.0054592807,0.0001735288],"about_ca_topic_score_codex":0.000033148644,"about_ca_topic_score_gemma":0.00003674499,"teacher_disagreement_score":0.0063001714,"about_ca_system_score_codex":0.000015322688,"about_ca_system_score_gemma":0.000019618643,"threshold_uncertainty_score":0.44444278},"labels":[],"label_agreement":null},{"id":"W2093682425","doi":"10.1016/j.femsle.2005.08.016","title":"A rapid screening test to distinguish between<i>Candida albicans</i>and<i>Candida dubliniensis</i>using NMR spectroscopy","year":2005,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":21,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"National Research Council Canada; National Research Council Institute for Biodiagnostics","funders":"","keywords":"Candida dubliniensis; Candida albicans; Nuclear magnetic resonance spectroscopy; Metabolite; Biology; Microbiology; Computational biology; Corpus albicans; Chemistry; Biochemistry; Stereochemistry","score_opus":0.021408822724343975,"score_gpt":0.2777495313155692,"score_spread":0.2563407085912252,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2093682425","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9815889,0.00042160167,0.0047397683,0.011995697,0.00015674495,0.00051618565,0.0001369382,0.00012847931,0.00031565578],"genre_scores_gemma":[0.9569729,0.000029891702,0.020666748,0.02074263,0.0011914034,0.00000995545,0.00013265821,0.000049770286,0.00020401744],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9974736,0.000094149655,0.0005697774,0.0008512477,0.000121311066,0.00088991894],"domain_scores_gemma":[0.99852455,0.00035826603,0.00016018833,0.00050571194,0.00009349817,0.00035776477],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00045754327,0.0003902829,0.0007723417,0.00020749534,0.00029375526,0.00004837042,0.00018459708,0.0002026649,0.00018350472],"category_scores_gemma":[0.00047500245,0.00035562718,0.00017441993,0.0003441234,0.0004617483,0.00009026524,0.00013193555,0.00051665667,0.00007083468],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015255257,0.000046058136,0.34152362,0.000025365312,0.00006744139,0.0000350816,0.00022783066,0.000005692301,0.64888906,0.0000031396228,0.006480212,0.0025439328],"study_design_scores_gemma":[0.0058292574,0.0012591485,0.64974725,0.00078642997,0.00066549703,0.00060410623,0.00042063175,0.00016318147,0.119428,0.000014602862,0.21947004,0.0016118829],"about_ca_topic_score_codex":0.00019277158,"about_ca_topic_score_gemma":0.0001940717,"teacher_disagreement_score":0.5294611,"about_ca_system_score_codex":0.00018508792,"about_ca_system_score_gemma":0.00008929919,"threshold_uncertainty_score":0.99988955},"labels":[],"label_agreement":null},{"id":"W2094662633","doi":"10.1016/j.femsle.2005.04.013","title":"The gene encoding xylulose-5-phosphate/fructose-6-phosphate phosphoketolase (<i>xfp</i>) is conserved among<i>Bifidobacterium</i>species within a more variable region of the genome and both are useful for strain identification","year":2005,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Enzyme Production and Characterization","field":"Biochemistry, Genetics and Molecular Biology","cited_by":45,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Agriculture and Agri-Food Canada","funders":"","keywords":"Gene; Genome; Genetics; Phosphate; Biochemistry; Biology; Chemistry","score_opus":0.01011522578307474,"score_gpt":0.2022545961304114,"score_spread":0.19213937034733666,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2094662633","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.989721,0.00088622485,0.001505348,0.006350417,0.00054665917,0.00063163,0.00033189022,0.000020375004,0.000006442789],"genre_scores_gemma":[0.992417,0.000400601,0.0005798816,0.0043368936,0.00022914946,0.00007610878,0.0004910779,0.000037048754,0.0014322884],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99848515,0.00011801711,0.0004948404,0.00052888336,0.000059772487,0.00031334514],"domain_scores_gemma":[0.9986035,0.000028466735,0.00063462043,0.00054546865,0.00013823783,0.000049700186],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003764514,0.00024344341,0.00022205169,0.00003458124,0.0003852207,0.00007282228,0.0003302347,0.00019717864,0.000010076635],"category_scores_gemma":[0.00008562883,0.00017889123,0.00010932125,0.0001312789,0.0005773526,0.000024964167,0.000110597175,0.0001361134,0.0000019188406],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001492902,0.00003011649,0.008072956,0.000030525545,0.00009352902,5.7769546e-7,0.00041776866,0.000067541805,0.9882163,0.000056568628,0.0028016213,0.00006322586],"study_design_scores_gemma":[0.00063121057,0.000042769076,0.041421846,0.000022434007,0.00005071702,0.00005514215,0.00020799607,0.000036554302,0.92001975,0.000011959361,0.037283655,0.00021594691],"about_ca_topic_score_codex":0.00001576251,"about_ca_topic_score_gemma":0.000037576665,"teacher_disagreement_score":0.068196505,"about_ca_system_score_codex":0.00003607845,"about_ca_system_score_gemma":0.000047849506,"threshold_uncertainty_score":0.7294973},"labels":[],"label_agreement":null},{"id":"W2095438923","doi":"10.1111/j.1574-6968.2001.tb10974.x","title":"A protein kinase inhibitor as an antimycobacterial agent","year":2001,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Mycobacterium research and diagnosis","field":"Medicine","cited_by":58,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"Canadian Institutes of Health Research; British Columbia Lung Association","keywords":"Mycobacterium smegmatis; Mycobacterium bovis; Growth inhibition; Kinase; Mycobacterium tuberculosis; Threonine; Protein kinase A; Biology; Antimycobacterial; Mycobacterium; Microbiology; Protein kinase C; Biochemistry; Serine; Phosphorylation; Molecular biology; Bacteria; Cell growth; Tuberculosis; Medicine","score_opus":0.016544462723294465,"score_gpt":0.27463541876099723,"score_spread":0.25809095603770277,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2095438923","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9879592,0.000054883305,0.00002439842,0.010075667,0.0005234365,0.00086745864,0.00006672155,0.00012406615,0.00030417187],"genre_scores_gemma":[0.9853354,0.00003974664,0.00070048426,0.011147839,0.0013548671,0.0001243897,0.0007726345,0.000038568487,0.00048604346],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99823725,0.00017339835,0.00028349823,0.00050903484,0.00009424335,0.0007025548],"domain_scores_gemma":[0.99900055,0.000036675527,0.00007167049,0.00045686474,0.0000643382,0.00036988864],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00021458488,0.00024360104,0.00036046206,0.00018444136,0.00010582829,0.000045142348,0.00017030911,0.00019543777,0.001541723],"category_scores_gemma":[0.00013894429,0.00020607492,0.0001295571,0.00017961407,0.00021461654,0.00012539337,0.00008762138,0.00030623344,0.0012178307],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0011201024,0.00030030494,0.016853044,0.00002655921,0.000059818274,0.0011885244,0.00008950935,1.6632426e-7,0.952562,0.000016066619,0.026328418,0.0014555214],"study_design_scores_gemma":[0.005486967,0.002490443,0.031610966,0.00020533473,0.0000748332,0.0020391594,0.00004812925,0.000005249359,0.54424757,0.000021060248,0.4132094,0.00056088355],"about_ca_topic_score_codex":0.00024412228,"about_ca_topic_score_gemma":0.000023215713,"teacher_disagreement_score":0.4083144,"about_ca_system_score_codex":0.00010415328,"about_ca_system_score_gemma":0.00010335344,"threshold_uncertainty_score":0.9995598},"labels":[],"label_agreement":null},{"id":"W2095541500","doi":"10.1111/1574-6968.12294","title":"Expression of an exogenous 1-aminocyclopropane-1-carboxylate deaminase gene in<i>Mesorhizobium</i>spp. reduces the negative effects of salt stress in chickpea","year":2013,"lang":"en","type":"letter","venue":"FEMS Microbiology Letters","topic":"Legume Nitrogen Fixing Symbiosis","field":"Agricultural and Biological Sciences","cited_by":51,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Waterloo","funders":"Fundação para a Ciência e a Tecnologia","keywords":"Salt (chemistry); Mesorhizobium; Biology; Gene; Gene expression; Chemistry; Genetics; Botany; Nitrogen fixation; Bacteria","score_opus":0.007142389043993431,"score_gpt":0.18738112981867666,"score_spread":0.18023874077468324,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2095541500","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9639993,0.0007372589,1.3483508e-7,0.033037096,0.00048484953,0.0012968052,0.0003901549,0.000037070728,0.000017368948],"genre_scores_gemma":[0.9529678,0.000053554286,0.00017390384,0.04460534,0.0007815556,0.00017155058,0.0011734534,0.000014767402,0.000058040037],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9955732,0.0014265691,0.0009340383,0.0009715208,0.00018938894,0.0009052394],"domain_scores_gemma":[0.9973863,0.0011839331,0.00090662827,0.00036865397,0.00009124222,0.00006326647],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00034635793,0.0006618368,0.0010886301,0.00014220447,0.00010620103,0.00003084622,0.0014228335,0.001166824,0.00007361283],"category_scores_gemma":[0.00010917925,0.00026854035,0.00026043516,0.0005109394,0.00073060923,0.0001497129,0.00029644163,0.0015621304,0.000024433062],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000051142855,0.00015409179,0.0016719087,0.00011423461,0.000050180228,0.00018085737,0.0006496092,0.0000024576602,0.9819896,2.074064e-7,0.014262877,0.0008728217],"study_design_scores_gemma":[0.00045898568,0.00035621165,0.013837216,0.00045062118,0.000046514342,0.00004823192,0.00009104388,0.0000012602369,0.9834201,0.000024094803,0.00077550346,0.0004902129],"about_ca_topic_score_codex":0.0038962574,"about_ca_topic_score_gemma":0.00048590172,"teacher_disagreement_score":0.013487374,"about_ca_system_score_codex":0.00011565298,"about_ca_system_score_gemma":0.00003129693,"threshold_uncertainty_score":0.9999767},"labels":[],"label_agreement":null},{"id":"W2095986631","doi":"10.1111/j.1574-6968.2011.02223.x","title":"The activity of bacteriocins from Carnobacterium maltaromaticum UAL307 against Gram-negative bacteria in combination with EDTA treatment","year":2011,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Probiotics and Fermented Foods","field":"Agricultural and Biological Sciences","cited_by":100,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of Alberta","funders":"Natural Sciences and Engineering Research Council of Canada; Fondation pour la Recherche Médicale; Alberta Heritage Foundation for Medical Research; Advanced Foods and Materials Network","keywords":"Bacteriocin; Nisin; Bacteria; Microbiology; Gram-negative bacteria; Pseudomonas; Biology; Antimicrobial; Escherichia coli; Pseudomonas aeruginosa; Biochemistry","score_opus":0.01651941155928367,"score_gpt":0.18614818039173212,"score_spread":0.16962876883244846,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2095986631","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9978161,0.000013846579,0.000004132112,0.0012342167,0.00019227082,0.00035438658,0.00024395665,0.000020234307,0.00012086225],"genre_scores_gemma":[0.99917877,0.000038997936,0.00019519895,0.00026425868,0.00003275976,0.00002128892,0.0002444492,0.000001980625,0.000022291088],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9989334,0.00018998608,0.00023606683,0.0002881696,0.00003872552,0.00031366842],"domain_scores_gemma":[0.9994312,0.00016592004,0.00022157552,0.000107516884,0.000031627857,0.000042168398],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00010982938,0.00020227525,0.00027195577,0.000018170975,0.00013239695,0.000023144828,0.00024126051,0.000112317124,0.000056137713],"category_scores_gemma":[0.000008858113,0.00006921907,0.00006780093,0.00015468198,0.0002800836,0.000083304054,0.000059076516,0.00011540711,0.000009181048],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00021333522,0.0002250554,0.016198963,0.0000017442651,0.000073671275,0.000004784419,0.0005795947,2.9389219e-7,0.97627234,0.0000131194665,0.000028950433,0.0063881697],"study_design_scores_gemma":[0.00059255963,0.0008693569,0.7613824,0.000031043426,0.000018862977,0.0000037546176,0.00020458826,0.0000060744405,0.23601992,0.00003684385,0.00065884006,0.00017574121],"about_ca_topic_score_codex":0.001951931,"about_ca_topic_score_gemma":0.0034243474,"teacher_disagreement_score":0.74518347,"about_ca_system_score_codex":0.00008264901,"about_ca_system_score_gemma":0.00001051611,"threshold_uncertainty_score":0.29507488},"labels":[],"label_agreement":null},{"id":"W2098136609","doi":"10.1016/j.femsle.2004.03.047","title":"The effect of NAG?thiazoline on morphology and surface hydrophobicity of Escherichia coli","year":2004,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Carbohydrate Chemistry and Synthesis","field":"Chemistry","cited_by":20,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research","keywords":"Thiazoline; Escherichia coli; Lysis; Biochemistry; Chemistry; Lytic cycle; Biosynthesis; Yield (engineering); Enzyme; Biology; Stereochemistry","score_opus":0.004553554602936123,"score_gpt":0.19674927713977158,"score_spread":0.19219572253683545,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2098136609","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9978511,0.00021629813,0.0000043228188,0.0012383589,0.00009885458,0.00007151364,0.00007130742,0.000021347407,0.00042694208],"genre_scores_gemma":[0.99946976,0.000041820374,0.00005503639,0.00027478317,0.000042189247,0.0000054979887,0.000028300572,0.000015917007,0.00006671339],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9990405,0.000067896115,0.0003034494,0.0002806948,0.000039704053,0.0002677501],"domain_scores_gemma":[0.9987796,0.00059016125,0.00020713605,0.0003652279,0.00001812083,0.000039775263],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00022360821,0.00020595829,0.00040587134,0.000017085458,0.000087300774,0.0000052889495,0.000235409,0.00022779651,0.000056501034],"category_scores_gemma":[0.000092396986,0.00014650032,0.00011084259,0.00007871031,0.00079747284,0.000011710457,0.00007250748,0.0002629746,0.0000070766823],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00031674284,0.000028951441,0.0013270412,0.00008759098,0.000096551776,0.000012032783,0.00006872763,0.0003978349,0.99733365,0.000012825376,0.00026400306,0.000054068416],"study_design_scores_gemma":[0.000889989,0.00009805101,0.00013448503,0.000041472664,0.00003883697,0.000038322774,0.000018204737,0.0000049455743,0.9979295,0.00001161925,0.0006683443,0.00012620633],"about_ca_topic_score_codex":0.00010617216,"about_ca_topic_score_gemma":0.0000059541494,"teacher_disagreement_score":0.0016186868,"about_ca_system_score_codex":0.000043806733,"about_ca_system_score_gemma":0.000017745057,"threshold_uncertainty_score":0.597411},"labels":[],"label_agreement":null},{"id":"W2099103625","doi":"10.1111/j.1574-6968.2009.01758.x","title":"Cell death in<i>Streptococcus mutans</i>â biofilms: a link between CSP and extracellular DNA","year":2009,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Streptococcal Infections and Treatments","field":"Medicine","cited_by":130,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"National Institute of Dental and Craniofacial Research; Canadian Institutes of Health Research; National Institutes of Health","keywords":"Streptococcus mutans; Biofilm; Quorum sensing; Microbiology; Biology; Population; Programmed cell death; Extracellular; Immunity; Immune system; Cell biology; Immunology; Bacteria; Genetics; Apoptosis; Medicine","score_opus":0.014889110653915245,"score_gpt":0.25196351131532496,"score_spread":0.23707440066140972,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2099103625","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99198014,0.0006966864,0.0000792769,0.005840515,0.000105617386,0.00071438553,0.00003881724,0.00007960134,0.00046497982],"genre_scores_gemma":[0.9965104,0.000044266504,0.00065022253,0.0020875046,0.00022807845,0.000033761975,0.00020927853,0.000018379813,0.00021812029],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99865866,0.0000583269,0.00032794825,0.00047700945,0.000035124107,0.0004429135],"domain_scores_gemma":[0.999398,0.000067184825,0.000084391955,0.00029416996,0.000026172165,0.00013006825],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009155184,0.00026600267,0.00042538546,0.00022278768,0.000078739715,0.000016562744,0.00006970749,0.00024401494,0.00007911961],"category_scores_gemma":[0.000014493979,0.00022653834,0.00009623282,0.00022929418,0.00012929653,0.00005052832,0.000026563379,0.00031506654,0.0000847578],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00002032271,0.00008209301,0.3940427,0.000008492447,0.000043701228,0.000157709,0.000059215447,9.597039e-7,0.6025677,0.000007337144,0.00056742865,0.0024423953],"study_design_scores_gemma":[0.0054293815,0.0010086477,0.7857855,0.00012806566,0.00023828135,0.0002921788,0.000034587072,0.00000705473,0.18579476,0.000053826865,0.020795576,0.00043214872],"about_ca_topic_score_codex":0.00006884598,"about_ca_topic_score_gemma":0.0000048342813,"teacher_disagreement_score":0.4167729,"about_ca_system_score_codex":0.000087954424,"about_ca_system_score_gemma":0.000029703971,"threshold_uncertainty_score":0.92379653},"labels":[],"label_agreement":null},{"id":"W2099315298","doi":"10.1111/j.1574-6968.2002.tb11378.x","title":"Interaction between Cry9Ca and two Cry1A δ-endotoxins from<i>Bacillus thuringiensis</i>in larval toxicity and binding to brush border membrane vesicles of the spruce budworm,<i>Choristoneura fumiferana</i>Clemens","year":2002,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Insect Resistance and Genetics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Natural Resources Canada; Canadian Forest Service","funders":"","keywords":"Choristoneura fumiferana; Spruce budworm; Bacillus thuringiensis; Brush border; Biology; Midgut; Frass; Bioassay; Bacillales; Vesicle; Botany; Biochemistry; Larva; Tortricidae; Membrane; Bacteria; Ecology","score_opus":0.009495689759019241,"score_gpt":0.23600266773765602,"score_spread":0.22650697797863678,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2099315298","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99724203,0.00042075012,0.000050074177,0.0015962641,0.0002175923,0.00024676314,0.00017418987,0.000008424423,0.000043932767],"genre_scores_gemma":[0.9971672,0.00018861661,0.00042426214,0.0018723055,0.0002049013,0.00000834196,0.000052156855,0.000020828273,0.000061356106],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9987025,0.00013001909,0.00031771144,0.00045542998,0.00005410587,0.00034019604],"domain_scores_gemma":[0.99942464,0.00004963902,0.00012436628,0.0003090413,0.000032384134,0.00005993026],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013440465,0.00021831514,0.00027257495,0.000083279585,0.000121064375,0.000022486802,0.00018555405,0.00014259575,0.000018582667],"category_scores_gemma":[0.000036779616,0.0001890503,0.00007118002,0.00012982091,0.00020837746,0.000008952152,0.00018531767,0.00019207003,0.000004680928],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000048864305,0.000025027059,0.038197182,0.000012188586,0.000063035804,0.0000031879067,0.00028129987,0.0000360039,0.9600193,0.0000023584412,0.0006144435,0.0006971034],"study_design_scores_gemma":[0.0009297789,0.00010612437,0.033527147,0.000037138758,0.000038145845,0.000020489033,0.00007975461,0.0000071309537,0.95538306,0.000005866628,0.009625096,0.00024028432],"about_ca_topic_score_codex":0.00020284476,"about_ca_topic_score_gemma":0.0009946185,"teacher_disagreement_score":0.009010653,"about_ca_system_score_codex":0.000027172244,"about_ca_system_score_gemma":0.000010501144,"threshold_uncertainty_score":0.7709248},"labels":[],"label_agreement":null},{"id":"W2101076752","doi":"10.1111/j.1574-6968.2007.01037.x","title":"Genome comparison of<i>Bifidobacterium longum</i>strains NCC2705 and CRC-002 using suppression subtractive hybridization","year":2008,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Probiotics and Fermented Foods","field":"Agricultural and Biological Sciences","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Bifidobacterium longum; Suppression subtractive hybridization; Bifidobacterium; Biology; Genetics; Computational biology; Microbiology; Bacteria; Gene","score_opus":0.03158618914946569,"score_gpt":0.23486519553255508,"score_spread":0.20327900638308938,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2101076752","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9984667,0.0001738895,0.0000862986,0.0006544705,0.00020549393,0.00018246355,0.00014831166,0.000028316716,0.00005409818],"genre_scores_gemma":[0.9988193,0.000044720397,0.00023803819,0.00038591353,0.00010965676,0.0000018484986,0.00038411297,0.0000019739646,0.000014428125],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99896836,0.00009339606,0.00028643783,0.00031701082,0.00004474955,0.00029002115],"domain_scores_gemma":[0.99957746,0.000054954657,0.00020121901,0.00006137095,0.000044524983,0.00006046321],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000087793385,0.00016835473,0.00028202057,0.000025653411,0.00022816808,0.000014449839,0.000149416,0.00014315342,0.000062656814],"category_scores_gemma":[0.000012251448,0.00008075371,0.00006483858,0.00013981201,0.00030534074,0.00009311397,0.00008510279,0.00016339705,0.000005662551],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000028998224,0.00008262466,0.025767796,0.000005390679,0.000024493307,0.000006082649,0.00023428886,0.000031059055,0.9733417,0.0000054023453,0.00016622046,0.0003059636],"study_design_scores_gemma":[0.00038271295,0.0003204537,0.6319141,0.000033507917,0.000034528388,0.00023301138,0.00017485404,0.0001486968,0.36263686,0.000007467037,0.0037435617,0.0003702396],"about_ca_topic_score_codex":0.00006692651,"about_ca_topic_score_gemma":0.000020032248,"teacher_disagreement_score":0.6107048,"about_ca_system_score_codex":0.000022640928,"about_ca_system_score_gemma":0.0000070108104,"threshold_uncertainty_score":0.32930407},"labels":[],"label_agreement":null},{"id":"W2101981952","doi":"10.1111/j.1574-6968.2000.tb09279.x","title":"Serological cross-reaction between the lipopolysaccharide O-polysaccharide antigens of<i>Escherichia coli</i>O157:H7 and strains of<i>Citrobacter freundii</i>and<i>Citrobacter sedlakii</i>","year":2000,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Escherichia coli research studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":47,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute for Biological Sciences","funders":"","keywords":"Citrobacter freundii; Escherichia coli; Antigen; Citrobacter; Epitope; Antiserum; Enterobacteriaceae; Microbiology; Lipopolysaccharide; Biology; Chemistry; Serology; Antigenicity; Antibody; Molecular biology; Biochemistry; Immunology","score_opus":0.011148043438137209,"score_gpt":0.251960175947129,"score_spread":0.24081213250899178,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2101981952","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9967458,0.00052432664,0.000109935,0.001654752,0.00012871221,0.00044580517,0.00025838593,0.00002468915,0.00010754837],"genre_scores_gemma":[0.9951884,0.00091739243,0.0004983927,0.0027389757,0.00033344983,0.000036573198,0.000103801605,0.000038558945,0.00014446164],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99758047,0.00032294213,0.00059286866,0.0007063102,0.00011904846,0.00067836675],"domain_scores_gemma":[0.9988525,0.00013407772,0.00025987398,0.0005211467,0.000106408486,0.00012600727],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0005003305,0.0004099459,0.00059144985,0.00007542408,0.00024812613,0.000042009884,0.00042677752,0.0003938989,0.000049411134],"category_scores_gemma":[0.00008626528,0.00030712818,0.00018995568,0.00014783154,0.0018390531,0.00002241909,0.0003031268,0.00047440166,0.000008435657],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00016008675,0.000047205544,0.11037323,0.00003249193,0.000378932,0.000003125276,0.00014204459,0.000011841029,0.88764536,0.000017848844,0.00058804086,0.0005997836],"study_design_scores_gemma":[0.001534906,0.0006396585,0.44416398,0.000038547674,0.00016310235,0.00006422609,0.00007068684,0.000010153684,0.5359144,0.000041629108,0.016784018,0.0005746412],"about_ca_topic_score_codex":0.00020979281,"about_ca_topic_score_gemma":0.00007095195,"teacher_disagreement_score":0.3517309,"about_ca_system_score_codex":0.000020369525,"about_ca_system_score_gemma":0.00005938551,"threshold_uncertainty_score":0.9999381},"labels":[],"label_agreement":null},{"id":"W2104256970","doi":"10.1111/1574-6968.12334","title":"Comparison of SEM and VPSEM imaging techniques with respect to<i>Streptococcus mutans</i>biofilm topography","year":2013,"lang":"en","type":"letter","venue":"FEMS Microbiology Letters","topic":"Bacterial biofilms and quorum sensing","field":"Biochemistry, Genetics and Molecular Biology","cited_by":56,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"York University","keywords":"Biofilm; Scanning electron microscope; Extracellular polymeric substance; Dehydration; Streptococcus mutans; Environmental scanning electron microscope; Chemistry; Microbiology; Materials science; Biomedical engineering; Chemical engineering; Bacteria; Biology; Composite material; Biochemistry; Medicine","score_opus":0.007290753340241039,"score_gpt":0.23639963014420592,"score_spread":0.22910887680396488,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2104256970","genre_codex":"empirical","genre_gemma":"commentary","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.868342,0.0005704085,0.00010267265,0.12926754,0.00031875228,0.00089449744,0.00027641014,0.000062497274,0.00016524039],"genre_scores_gemma":[0.3387257,0.00009366094,0.010866313,0.6417132,0.0033094403,0.00011581055,0.0045927158,0.00024605347,0.00033714477],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99754333,0.00016956987,0.00053525815,0.0009947481,0.000076932396,0.00068013713],"domain_scores_gemma":[0.9986507,0.000033414763,0.0004011422,0.0006893103,0.00014177518,0.000083605206],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00013181634,0.0006068821,0.0007980172,0.00027025797,0.000106907624,0.000064125285,0.0003521453,0.000834557,0.000025053163],"category_scores_gemma":[0.000017768254,0.0005147842,0.00016276562,0.0001882093,0.00058936886,0.0000072744756,0.00024473437,0.00073347037,0.000009186919],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00004739142,0.000011876329,0.0035227058,0.000036628888,0.00010295683,0.000022656925,0.00003711394,3.403175e-7,0.5734899,4.284806e-7,0.42203215,0.0006958366],"study_design_scores_gemma":[0.00019099093,0.00029653945,0.00033627817,0.00009217437,0.000050253886,0.00011323366,0.00002195117,3.251286e-7,0.55501103,6.616243e-7,0.44345456,0.0004319651],"about_ca_topic_score_codex":0.00010537009,"about_ca_topic_score_gemma":0.000027834994,"teacher_disagreement_score":0.5296163,"about_ca_system_score_codex":0.00002303267,"about_ca_system_score_gemma":0.000048082988,"threshold_uncertainty_score":0.99973035},"labels":[],"label_agreement":null},{"id":"W2104646315","doi":"10.1111/j.1574-6968.2001.tb10787.x","title":"A catalase gene of<i>Colletotrichum gloeosporioides</i>f. sp.<i>malvae</i>is highly expressed during the necrotrophic phase of infection of round-leaved mallow,<i>Malva pusilla</i>","year":2001,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Plant Pathogens and Fungal Diseases","field":"Biochemistry, Genetics and Molecular Biology","cited_by":14,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Catalase; Biology; Hydrogen peroxide; Microbiology; Pathogen; Fungal pathogen; Fungus; Colletotrichum gloeosporioides; Colletotrichum; Host (biology); Gene expression; Pathogenic fungus; Botany; Gene; Enzyme; Biochemistry; Genetics","score_opus":0.00731713576820403,"score_gpt":0.2135588831374855,"score_spread":0.20624174736928147,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2104646315","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9953325,0.0011213477,0.00029612595,0.00032431437,0.0002594824,0.00040436393,0.0022105249,0.000015486481,0.000035872705],"genre_scores_gemma":[0.9968606,0.00088798703,0.00017904773,0.001034378,0.00018060498,0.00003065126,0.0006674813,0.000032415865,0.00012678125],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9982251,0.00015213079,0.0006246265,0.00048502756,0.0000962235,0.00041690262],"domain_scores_gemma":[0.99860114,0.00003781037,0.0005142827,0.00062991463,0.0001360694,0.00008080896],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0001752074,0.0003129725,0.0004791244,0.00012616308,0.00011499776,0.000010280422,0.00032175813,0.00023759554,0.000030012136],"category_scores_gemma":[0.000052287796,0.00025726669,0.0003545615,0.00028234022,0.0003876157,0.000013192001,0.0001632207,0.00014347548,0.000005323188],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00088295084,0.00028393744,0.032822452,0.00008521327,0.00023898188,0.000039641913,0.000054631793,0.00018373426,0.96341354,0.0000036556055,0.0019150021,0.00007627549],"study_design_scores_gemma":[0.0023003002,0.00034886494,0.017836338,0.000040064297,0.00012765227,0.00022349342,0.0000153276,0.000008363859,0.9701061,0.0000033184988,0.0087137725,0.00027639518],"about_ca_topic_score_codex":0.00028378994,"about_ca_topic_score_gemma":0.00003537692,"teacher_disagreement_score":0.014986115,"about_ca_system_score_codex":0.000024165094,"about_ca_system_score_gemma":0.000072596944,"threshold_uncertainty_score":0.99998796},"labels":[],"label_agreement":null},{"id":"W2105532410","doi":"10.1111/j.1574-6968.2001.tb10761.x","title":"In vitro reconstruction of the biosynthetic pathway of peptidoglycan cytoplasmic precursor in Pseudomonas aeruginosa","year":2001,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Bacterial Genetics and Biotechnology","field":"Biochemistry, Genetics and Molecular Biology","cited_by":40,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"","keywords":"Peptidoglycan; Pseudomonas aeruginosa; In vitro; Cytoplasm; Microbiology; Pseudomonadaceae; Chemistry; Pseudomonadales; Bacteria; Biology; Cell biology; Biochemistry; Cell wall; Genetics","score_opus":0.004625011463118635,"score_gpt":0.18695355564287489,"score_spread":0.18232854417975625,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2105532410","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99726856,0.0001628472,0.000020866999,0.0016889761,0.0005145422,0.00023080384,0.000060321207,0.0000040378786,0.00004906975],"genre_scores_gemma":[0.99897414,0.00013896612,0.00036877187,0.0003678315,0.000053185722,0.000010496451,0.000033307235,0.000012490673,0.00004078052],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99885315,0.00013160906,0.00039051234,0.00032128955,0.000027558344,0.0002758672],"domain_scores_gemma":[0.9993738,0.000013589504,0.00020524953,0.00036455825,0.000025020725,0.000017776918],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001490934,0.00015657,0.00025673577,0.00013934376,0.000018930343,0.000002699455,0.00030819434,0.00035720953,0.00001340879],"category_scores_gemma":[0.000032866796,0.000126698,0.00009930897,0.00021203453,0.00059191353,0.0000027747699,0.00012797226,0.00016683398,0.0000027764804],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00020959208,0.000057688427,0.008700967,0.000009935732,0.00001792042,0.0000029887044,0.00003713485,0.00001985559,0.9885218,0.000010885063,0.00010363853,0.0023076003],"study_design_scores_gemma":[0.00064374856,0.000106004,0.0034160267,0.000029189914,0.0000059163863,0.00022712743,0.000030494992,0.000003971585,0.9909934,0.000024102555,0.004389973,0.00013003824],"about_ca_topic_score_codex":0.000072657735,"about_ca_topic_score_gemma":0.00023368445,"teacher_disagreement_score":0.0052849404,"about_ca_system_score_codex":0.000023278459,"about_ca_system_score_gemma":0.00004792353,"threshold_uncertainty_score":0.51665944},"labels":[],"label_agreement":null},{"id":"W2105816069","doi":"10.1111/j.1574-6968.2008.01162.x","title":"High spatial resolution analysis of fungal cell biochemistry â bridging the analytical gap using synchrotron FTIR spectromicroscopy","year":2008,"lang":"en","type":"review","venue":"FEMS Microbiology Letters","topic":"Spectroscopy Techniques in Biomedical and Chemical Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":45,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba; University of Saskatchewan","funders":"","keywords":"Synchrotron; Hypha; Context (archaeology); Fungal growth; Biology; Bridging (networking); Chemistry; Botany; Computational biology; Biophysics; Nanotechnology; Biochemistry; Biological system; Biochemical engineering; Materials science; Physics; Computer science; Optics; Engineering","score_opus":0.02217383739084266,"score_gpt":0.32657761700775767,"score_spread":0.304403779616915,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2105816069","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.16725153,0.82596576,0.0047935843,0.00021500456,0.0002774235,0.00065506174,0.0007113082,0.000042436415,0.00008786909],"genre_scores_gemma":[0.009918756,0.9820761,0.0025296328,0.0003701438,0.0009969885,0.0000466365,0.0038567965,0.00007817383,0.00012674986],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9966722,0.00030931758,0.0009186352,0.0010537707,0.00019917193,0.0008469202],"domain_scores_gemma":[0.9981136,0.00011050625,0.0005490756,0.0010092983,0.00007770207,0.00013984813],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00031449122,0.00060870673,0.0016375409,0.00032817305,0.0001772984,0.000024288813,0.0010580826,0.0010849378,0.00008705665],"category_scores_gemma":[0.00010750966,0.00044462757,0.0013005529,0.000841478,0.0016303317,0.0000030721617,0.0005609006,0.00091787375,0.00000881596],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000053255422,0.0000859701,0.000027007382,0.0005189617,0.0013514187,0.000020457026,0.0000048598326,0.000006742661,0.9847642,0.0000026233934,0.009851975,0.0033125065],"study_design_scores_gemma":[0.00037297103,0.00023026555,0.000011436371,0.00070301694,0.0034264235,0.00033167127,0.0000057943093,0.00018371615,0.6725575,0.0000027572532,0.32131884,0.0008556517],"about_ca_topic_score_codex":0.00024157157,"about_ca_topic_score_gemma":0.0000058263727,"teacher_disagreement_score":0.31220677,"about_ca_system_score_codex":0.00031376202,"about_ca_system_score_gemma":0.00031980927,"threshold_uncertainty_score":0.99980056},"labels":[],"label_agreement":null},{"id":"W2106472904","doi":"10.1111/1574-6968.12494","title":"Recovery of<i>Pseudomonas aeruginosa</i>culturability following copper- and chlorine-induced stress","year":2014,"lang":"en","type":"letter","venue":"FEMS Microbiology Letters","topic":"Bacterial biofilms and quorum sensing","field":"Biochemistry, Genetics and Molecular Biology","cited_by":45,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Polytechnique Montréal; Institut National de la Recherche Scientifique","funders":"Canada Research Chairs","keywords":"Chlorine; Copper; Pseudomonas aeruginosa; Chemistry; Chelation; Bacteria; Infectivity; Ion; Microbiology; Incubation; Nuclear chemistry; Inorganic chemistry; Biochemistry; Biology; Virology; Organic chemistry","score_opus":0.010675275458531861,"score_gpt":0.21444467430435832,"score_spread":0.20376939884582645,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2106472904","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.91156995,0.00030480805,0.000012361894,0.08544181,0.0019398715,0.0003397435,0.0002683232,0.000025925816,0.00009718154],"genre_scores_gemma":[0.63403565,0.00012748298,0.0005848459,0.35521242,0.0040590907,0.000019050647,0.0056457547,0.0001105118,0.00020520618],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9972436,0.0003005492,0.00059585617,0.001093899,0.00008055813,0.00068553153],"domain_scores_gemma":[0.9986018,0.00007639966,0.00041696575,0.00076013175,0.000073170166,0.00007151098],"candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.00027001803,0.00062436546,0.00086975243,0.00009747233,0.00012768323,0.00004439879,0.00035755237,0.0016738796,0.000009797627],"category_scores_gemma":[0.00008320721,0.00056746666,0.00045374993,0.00007536719,0.00032017028,0.000007753713,0.00027665877,0.000827822,0.0000110452465],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000056501023,0.000012765797,0.00054284115,0.00008900179,0.00024172563,0.000036076,0.000018491459,0.0000012203144,0.74443007,4.78903e-7,0.25432193,0.00024886735],"study_design_scores_gemma":[0.00063937786,0.00027223155,0.00027779338,0.00012519481,0.00011709265,0.00018229353,0.0000112371,3.4457813e-7,0.6044324,0.0000017748279,0.39326772,0.0006725453],"about_ca_topic_score_codex":0.00014086465,"about_ca_topic_score_gemma":0.000027687443,"teacher_disagreement_score":0.27753434,"about_ca_system_score_codex":0.00003471243,"about_ca_system_score_gemma":0.00005815348,"threshold_uncertainty_score":0.99967766},"labels":[],"label_agreement":null},{"id":"W2107193029","doi":"10.1111/j.1574-6968.2008.01138.x","title":"A new species of Pythium with inflated sporangia and coiled antheridia, isolated from India","year":2008,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Plant Pathogens and Resistance","field":"Agricultural and Biological Sciences","cited_by":24,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Agriculture and Agri-Food Canada","funders":"","keywords":"Sporangium; Antheridium; Pythium; Oomycete; Biology; Botany; Internal transcribed spacer; Ribosomal RNA; Spore; Microbiology; Genetics; Pathogen","score_opus":0.007087217907152788,"score_gpt":0.15037786901267947,"score_spread":0.1432906511055267,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2107193029","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9981406,0.00040218688,0.000010630197,0.0008111089,0.00006565649,0.00010699616,0.00034364144,0.000034099765,0.000085080464],"genre_scores_gemma":[0.9983782,0.00012670738,0.000276041,0.00057579804,0.00008392701,0.000001229973,0.00029765547,0.0000012783213,0.00025917232],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9992935,0.00004455833,0.00016885021,0.0002446337,0.00003397794,0.00021446006],"domain_scores_gemma":[0.99966407,0.000084840525,0.00012213782,0.000049267794,0.000020000374,0.00005966377],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000037437785,0.00014288662,0.0002588706,0.000014597299,0.000096999895,0.000007767452,0.00012772017,0.00012420308,0.00023874416],"category_scores_gemma":[0.000004182741,0.000052935335,0.000039498063,0.00016865211,0.00020879498,0.000039253067,0.000029342258,0.000103324535,0.0000130312255],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013755352,0.000012437675,0.044871602,0.0000015841161,0.000040620547,0.00007815968,0.00011310498,0.000001057134,0.9517597,0.0000029573453,0.0027187467,0.0002625012],"study_design_scores_gemma":[0.00043097185,0.0002025058,0.9220595,0.000041593546,0.000017943603,0.00013587443,0.000068012756,0.0000023860916,0.06486663,0.000004188558,0.011946919,0.00022349217],"about_ca_topic_score_codex":0.00044410373,"about_ca_topic_score_gemma":0.00026763687,"teacher_disagreement_score":0.88689303,"about_ca_system_score_codex":0.000007012061,"about_ca_system_score_gemma":0.000009322785,"threshold_uncertainty_score":0.26140812},"labels":[],"label_agreement":null},{"id":"W2107398951","doi":"10.1111/j.1574-6968.1997.tb10250.x","title":"Pseudomonas aeruginosa rfc genes of serotypes O2 and O5 could complement O-polymerase-deficient semi-rough mutants of either serotype","year":2006,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Bacterial Genetics and Biotechnology","field":"Biochemistry, Genetics and Molecular Biology","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"Medical Research Council","keywords":"Mutant; Gene; Biology; Pseudomonas aeruginosa; Serotype; Polymerase; Plasmid; Genetics; Molecular biology; Microbiology; Bacteria","score_opus":0.0063481211071325806,"score_gpt":0.20831246485869076,"score_spread":0.20196434375155817,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2107398951","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9957808,0.002054695,0.00023382368,0.0010504035,0.00023605062,0.00027075078,0.00029977254,0.000013980129,0.00005967508],"genre_scores_gemma":[0.9972587,0.00025300524,0.0012258054,0.0006680756,0.00015197028,0.000010842839,0.00033421148,0.00002572415,0.000071632116],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.998627,0.00007568073,0.00043699876,0.00044612342,0.000052885604,0.00036129626],"domain_scores_gemma":[0.9992525,0.000014043159,0.00025752478,0.00037109666,0.00007008232,0.000034750596],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012578144,0.00025081518,0.00035848003,0.00009956787,0.00005520397,0.0000076113565,0.00024005622,0.00035430078,0.000025829022],"category_scores_gemma":[0.000008168262,0.00022517168,0.00008807387,0.000116855306,0.0005563637,0.0000023386278,0.00021750262,0.00010152826,0.0000047489257],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010278135,0.0000937939,0.0071512866,0.000031260704,0.00009620957,0.0000040280515,0.000017963297,0.00005464233,0.9898658,0.00008954661,0.0014640815,0.0010286336],"study_design_scores_gemma":[0.00072231656,0.0003430605,0.00324777,0.000017949289,0.000031686734,0.00007335023,0.000018462873,0.000004695181,0.95317537,0.000018654238,0.042122487,0.00022420898],"about_ca_topic_score_codex":0.00033771442,"about_ca_topic_score_gemma":0.00012373223,"teacher_disagreement_score":0.040658403,"about_ca_system_score_codex":0.000013060403,"about_ca_system_score_gemma":0.000045586567,"threshold_uncertainty_score":0.91822344},"labels":[],"label_agreement":null},{"id":"W2107550729","doi":"10.1111/j.1574-6968.2011.02398.x","title":"Characterization of the Streptococcus suis XerS recombinase and its unconventional cleavage of the difSL site","year":2011,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Streptococcal Infections and Treatments","field":"Medicine","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal","funders":"","keywords":"Recombinase; Biology; DNA; Plasmid; Holliday junction; Maltose-binding protein; Genetics; Site-specific recombination; Gene; Recombinant DNA; Molecular biology; Microbiology; Biochemistry; Fusion protein; Recombination; Homologous recombination","score_opus":0.018771540649692543,"score_gpt":0.21829430536622976,"score_spread":0.1995227647165372,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2107550729","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99807435,0.000019965846,0.0000075780913,0.00075086724,0.00034489096,0.00053385313,0.00012868381,0.000009142887,0.00013068879],"genre_scores_gemma":[0.99915886,0.000008479315,0.000014741616,0.0004944789,0.000018183993,0.000020970441,0.00006230624,0.000008032842,0.00021396279],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9994201,0.00007268782,0.00020928844,0.00015253363,0.000030062267,0.00011532788],"domain_scores_gemma":[0.9995128,0.000023031167,0.000189432,0.0002090814,0.000040972816,0.000024682828],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000057276062,0.000097635835,0.00016619178,0.000043043387,0.00006571479,0.0000018698195,0.00006675042,0.000071593095,0.00012191412],"category_scores_gemma":[0.000019026382,0.000055592795,0.000115280425,0.00012135739,0.00021695488,0.000030375253,0.00006112054,0.00009840932,0.000008175001],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000025601626,0.00008622313,0.40715906,0.000012890785,0.00007034355,9.1694346e-7,0.00012142168,6.823149e-8,0.5922526,0.00003398667,0.00013391404,0.00010293206],"study_design_scores_gemma":[0.00063310226,0.00006896043,0.6103895,0.00004785005,0.00006549354,0.000021806343,0.000010700022,0.0000012620156,0.3885062,0.000007867484,0.00021373236,0.000033580513],"about_ca_topic_score_codex":0.000056477915,"about_ca_topic_score_gemma":0.000016621218,"teacher_disagreement_score":0.20374644,"about_ca_system_score_codex":0.000024074709,"about_ca_system_score_gemma":0.000019390627,"threshold_uncertainty_score":0.22670083},"labels":[],"label_agreement":null},{"id":"W2108106603","doi":"10.1111/j.1574-6968.2004.tb09689.x","title":"Effect of uncouplers on endogenous respiration and ferrous iron oxidation in a chemolithoautotrophic bacterium<i>Acidithiobacillus</i>(<i>Thiobacillus</i>)<i>ferrooxidans</i>","year":2004,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Metal Extraction and Bioleaching","field":"Engineering","cited_by":10,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba","funders":"","keywords":"Ferrous; Chemistry; Rotenone; Dinitrophenol; Redox; NAD+ kinase; Respiratory chain; Oxidative phosphorylation; Respiration; Biochemistry; Oxygen; Inorganic chemistry; Nuclear chemistry; Mitochondrion; Organic chemistry; Enzyme; Biology","score_opus":0.00844586251435459,"score_gpt":0.19874274878485026,"score_spread":0.19029688627049568,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2108106603","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9975115,0.00018740725,0.0006339319,0.00031464957,0.000563958,0.0004185762,0.000027083612,0.00014682795,0.00019606839],"genre_scores_gemma":[0.99862987,0.00007009389,0.00023589429,0.0008050441,0.000072744944,0.000025941232,0.00011525341,0.000038032555,0.000007148642],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9985154,0.00018076427,0.0004602858,0.0003745294,0.00008239863,0.00038658478],"domain_scores_gemma":[0.9994552,0.000094199786,0.000114087685,0.00025233912,0.000016866989,0.00006729027],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0004957953,0.00033727416,0.00042882652,0.00027910716,0.00006557612,0.000022000626,0.00013194933,0.00023929065,0.000013688917],"category_scores_gemma":[0.00004936502,0.00030508678,0.00008780687,0.0002208099,0.00012466118,0.00014330535,0.000026051952,0.00042496066,0.0000311942],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00016778243,0.000029003526,0.00027788104,0.00012619815,0.000024240713,0.000024722383,0.0002779136,0.020515304,0.9762821,0.000024683706,0.000037473113,0.0022126574],"study_design_scores_gemma":[0.002467587,0.000666715,0.0016527256,0.00013205939,0.000032707016,0.0002531022,0.000021055996,0.00019107666,0.9928108,0.000010402319,0.0013599955,0.00040179444],"about_ca_topic_score_codex":0.0001313229,"about_ca_topic_score_gemma":0.00009507165,"teacher_disagreement_score":0.020324228,"about_ca_system_score_codex":0.000252107,"about_ca_system_score_gemma":0.000015814383,"threshold_uncertainty_score":0.9999401},"labels":[],"label_agreement":null},{"id":"W2109558197","doi":"10.1093/femsle/fnv122","title":"Prebiotics and gut microbiota in chickens","year":2015,"lang":"en","type":"review","venue":"FEMS Microbiology Letters","topic":"Animal Nutrition and Physiology","field":"Agricultural and Biological Sciences","cited_by":284,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"","keywords":"Prebiotic; Gut flora; Biology; Immune system; Inulin; Health benefits; Lactobacillus; Probiotic; Biotechnology; Microbiology; Food science; Immunology; Bacteria; Medicine; Genetics; Fermentation","score_opus":0.04801759583520657,"score_gpt":0.2679305185088788,"score_spread":0.2199129226736722,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2109558197","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.026189106,0.9714502,1.2965305e-7,0.0009653068,0.0002677297,0.00049524213,0.00051332545,0.00004444723,0.000074489406],"genre_scores_gemma":[0.0006682113,0.99507165,0.00006177381,0.0019204745,0.00033068468,0.000018733617,0.0018307407,0.000004077609,0.00009365152],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9980533,0.00037661218,0.00046284226,0.00060868275,0.00002862578,0.0004699155],"domain_scores_gemma":[0.99937624,0.00019795216,0.00021311651,0.000087224216,0.000024743682,0.00010073061],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00020740619,0.0004143708,0.0012560886,0.0000509177,0.00007174069,0.000026952092,0.00034825937,0.000660545,0.00010816151],"category_scores_gemma":[0.000018476814,0.00016609688,0.00020656773,0.00026628896,0.0003158378,0.000033681674,0.00019741533,0.00052549894,0.00018543449],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00002752847,0.00014601107,0.00012682923,0.00097113516,0.00009494419,0.00004774278,0.000057797573,1.16656295e-7,0.38601118,0.000061228224,0.051670652,0.5607848],"study_design_scores_gemma":[0.0001338949,0.00010922995,0.00044095458,0.0007152323,0.00005323779,0.00020939847,0.000012656172,1.550684e-7,0.0000019124702,0.000017250884,0.99793655,0.00036952106],"about_ca_topic_score_codex":0.000076307646,"about_ca_topic_score_gemma":0.00019583592,"teacher_disagreement_score":0.9462659,"about_ca_system_score_codex":0.00006475282,"about_ca_system_score_gemma":0.000019352206,"threshold_uncertainty_score":0.6773234},"labels":[],"label_agreement":null},{"id":"W2110498723","doi":"10.1111/j.1574-6968.1997.tb12618.x","title":"Archaeosomes as novel antigen delivery systems1","year":2006,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Lipid Membrane Structure and Behavior","field":"Biochemistry, Genetics and Molecular Biology","cited_by":104,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute for Biological Sciences","funders":"","keywords":"Cholera toxin; Adjuvant; Immune system; Antigen; Bovine serum albumin; Liposome; Antibody; Biology; Lipid A; Microbiology; Biochemistry; Molecular biology; Immunology","score_opus":0.0047929371329338884,"score_gpt":0.20229256479954985,"score_spread":0.19749962766661597,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2110498723","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99735117,0.0002880808,0.00025472426,0.0006357444,0.0007630471,0.0002036068,0.00009003356,0.000033109984,0.00038046917],"genre_scores_gemma":[0.99373484,0.000024776971,0.00043986973,0.003047255,0.0009879344,0.000016307848,0.0008987692,0.000029938748,0.0008203021],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9987977,0.00004661171,0.00024156271,0.00046187022,0.000042103482,0.00041014596],"domain_scores_gemma":[0.9994634,0.000009943552,0.00009165055,0.00034799712,0.000039855175,0.000047145866],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00007930746,0.0002314273,0.00021513738,0.00006820315,0.00009389231,0.000016078322,0.00026011106,0.00023493438,0.000032979166],"category_scores_gemma":[0.0000082961715,0.00020448565,0.00013957752,0.00006468745,0.00022554919,0.0000037893628,0.00011377132,0.00011826431,0.0000912162],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000035119207,0.00003274037,0.006847248,0.000011531934,0.000044032236,0.000013151672,0.000015468102,0.000021228045,0.98391217,0.00004220922,0.0089010885,0.00012403495],"study_design_scores_gemma":[0.00056408864,0.00007633061,0.004908061,0.000010588314,0.000021827616,0.00039404974,0.000017026237,4.480633e-7,0.87456846,0.000003351356,0.11916969,0.00026609242],"about_ca_topic_score_codex":0.00030507953,"about_ca_topic_score_gemma":0.00006570171,"teacher_disagreement_score":0.1102686,"about_ca_system_score_codex":0.00001578708,"about_ca_system_score_gemma":0.000041784147,"threshold_uncertainty_score":0.83386827},"labels":[],"label_agreement":null},{"id":"W2112153736","doi":"10.1016/j.femsle.2004.07.059","title":"Cholesterol and the activity of bacterial toxins","year":2004,"lang":"en","type":"review","venue":"FEMS Microbiology Letters","topic":"Lipid Membrane Structure and Behavior","field":"Biochemistry, Genetics and Molecular Biology","cited_by":81,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Waterloo","funders":"","keywords":"Vibrio cholerae; Cytolysin; Toxin; Microbiology; Microbial toxins; Hemolysin; Staphylococcus aureus; Bacteria; Cholesterol; Biology; Diphtheria toxin; Cholera toxin; Chemistry; Biochemistry; Virulence","score_opus":0.011506380391888109,"score_gpt":0.25721783802471115,"score_spread":0.24571145763282304,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2112153736","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.22609834,0.77109355,0.000019227005,0.00020810206,0.0012076776,0.0009582102,0.00037222714,0.000010722382,0.00003196339],"genre_scores_gemma":[0.007956009,0.9900483,0.000049107864,0.00040295906,0.0006458484,0.00005144699,0.0007271431,0.000042528754,0.00007669172],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.99876946,0.00023817606,0.00030096207,0.00042346262,0.000027409029,0.00024052917],"domain_scores_gemma":[0.99917096,0.000029009876,0.00030712062,0.00044099014,0.000016986223,0.000034939574],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014481784,0.00034409337,0.0009372478,0.000046313697,0.000054183074,0.000014239807,0.00031054273,0.00048821207,0.000015949177],"category_scores_gemma":[0.000018763483,0.00020477129,0.0003608525,0.000049471037,0.00072134886,0.0000021905198,0.00019303842,0.00025628836,0.000004980317],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00005639098,0.000016316924,0.0000021917103,0.0010638972,0.00018050827,0.0000012087054,0.00001965689,1.4615003e-7,0.9232902,0.000006041152,0.000245431,0.07511801],"study_design_scores_gemma":[0.0013263336,0.00007738229,0.000014664359,0.00058394606,0.0005289888,0.00032599055,0.0000018631963,5.9425957e-9,0.060259588,6.8089554e-7,0.93660975,0.00027080168],"about_ca_topic_score_codex":0.000024174666,"about_ca_topic_score_gemma":0.000014362693,"teacher_disagreement_score":0.93636435,"about_ca_system_score_codex":0.000016265241,"about_ca_system_score_gemma":0.000104664185,"threshold_uncertainty_score":0.83503306},"labels":[],"label_agreement":null},{"id":"W2112767288","doi":"10.1111/j.1574-6968.2006.00366.x","title":"Identification of acquired DNA in<i>Neisseria lactamica</i>","year":2006,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Bacterial Genetics and Biotechnology","field":"Biochemistry, Genetics and Molecular Biology","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"","keywords":"Neisseria; Biology; Genome; Genetics; Operon; Gene; Microbiology; Bacteria; Escherichia coli","score_opus":0.003431593597970077,"score_gpt":0.19322821242852656,"score_spread":0.18979661883055648,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2112767288","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9980925,0.00019777764,0.0001541438,0.0009830631,0.00032176124,0.0001466424,0.00004509004,0.000012494918,0.0000465556],"genre_scores_gemma":[0.9986509,0.000037774258,0.00018891343,0.00044108462,0.00013252019,0.000011205867,0.00042429465,0.000015752892,0.00009754271],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99894404,0.000056735975,0.00038996743,0.00033864382,0.000017649012,0.00025298313],"domain_scores_gemma":[0.9994527,0.0000059114623,0.0001705479,0.00032555847,0.000029887808,0.000015382639],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001319773,0.0001389583,0.00018086926,0.0000925637,0.000024340807,0.000007693955,0.0002443867,0.00032502544,0.000010083743],"category_scores_gemma":[0.000013493366,0.0001393903,0.000066221226,0.0001154459,0.0002346925,0.0000021575588,0.00008594795,0.000042668744,0.0000132055575],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000051845567,0.0000533738,0.0037847203,0.000006868543,0.000015162517,0.0000013380594,0.0000062613026,0.000019996176,0.9938996,0.0000507273,0.0019350582,0.00017509118],"study_design_scores_gemma":[0.00042278218,0.00007006877,0.017515987,0.000005099547,0.0000070399524,0.000020482488,0.0000072239204,0.0000031189707,0.9705249,0.000034606463,0.01124457,0.00014413071],"about_ca_topic_score_codex":0.00004803452,"about_ca_topic_score_gemma":0.000103670696,"teacher_disagreement_score":0.023374666,"about_ca_system_score_codex":0.000012766272,"about_ca_system_score_gemma":0.00001955421,"threshold_uncertainty_score":0.56841713},"labels":[],"label_agreement":null},{"id":"W2114128472","doi":"10.1016/s0378-1097(03)00725-0","title":"Stereoselective biosynthesis of chloroarylpropane diols by the basidiomycete<i>Bjerkandera adusta</i>: exploring the roles of amino acids, pyruvate, glycerol and phenyl acetyl carbinol","year":2003,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Analytical Chemistry and Chromatography","field":"Chemistry","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Research and Productivity Council; Natural Resources Canada; Canadian Forest Service","funders":"","keywords":"Chemistry; Glycerol; Biosynthesis; Diol; Stereochemistry; Phenylalanine; Amino acid; Organic chemistry; Biochemistry; Enzyme","score_opus":0.01088294442644799,"score_gpt":0.1877445340561165,"score_spread":0.1768615896296685,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2114128472","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.996807,0.0011883309,0.000047115198,0.00079607434,0.000045134955,0.00014183501,0.00015846096,0.000035852827,0.0007802061],"genre_scores_gemma":[0.9990673,0.00016474142,0.00004038962,0.00047331807,0.00005254365,0.000053041178,0.000033425193,0.000030493247,0.00008476545],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.998383,0.00011697184,0.00047045515,0.00045315005,0.00009791352,0.00047852044],"domain_scores_gemma":[0.9985969,0.0004486512,0.00028577374,0.00053720025,0.000063426305,0.0000680204],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00021136682,0.00035437508,0.0005163418,0.000043866352,0.00018769145,0.000020163585,0.00045712222,0.00019405196,0.000120272525],"category_scores_gemma":[0.0000824077,0.00022234456,0.00021526989,0.00023958064,0.0012355025,0.00008031912,0.00009555476,0.00040957332,0.0000024701972],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009534464,0.000060984712,0.008933291,0.00011686285,0.00045056257,0.0000033509614,0.00061595876,0.0000032885978,0.9881681,0.00003681664,0.0011331851,0.00038221272],"study_design_scores_gemma":[0.00058273005,0.000042027816,0.00025334748,0.00007710721,0.00015936619,0.000068683345,0.0015222969,0.0000033333117,0.9947935,0.000026097106,0.0022291306,0.00024239918],"about_ca_topic_score_codex":0.000037888378,"about_ca_topic_score_gemma":0.000008171217,"teacher_disagreement_score":0.008679944,"about_ca_system_score_codex":0.000030970154,"about_ca_system_score_gemma":0.000028711493,"threshold_uncertainty_score":0.9066948},"labels":[],"label_agreement":null},{"id":"W2114420357","doi":"10.1016/s0378-1097(03)00311-2","title":"Interactions of the<i>Caulobacter crescentus</i>XerC and XerD recombinases with the<i>E. coli dif</i>site","year":2003,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Bacterial Genetics and Biotechnology","field":"Biochemistry, Genetics and Molecular Biology","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal","funders":"","keywords":"Caulobacter crescentus; Recombinase; Biology; Holliday junction; Escherichia coli; Chromosome segregation; Fusion protein; Cooperativity; Homologous recombination; Genetics; DNA; Maltose-binding protein; Cell biology; Gene; Chromosome; Recombination; Recombinant DNA; Bacterial protein","score_opus":0.0036766732537445025,"score_gpt":0.1811882913432819,"score_spread":0.17751161808953742,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2114420357","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99313533,0.0002311029,0.00006254807,0.0057168654,0.0004445581,0.0002300395,0.000057935464,0.000008559761,0.00011303421],"genre_scores_gemma":[0.9959167,0.00012889682,0.00021104518,0.003333333,0.000056131506,0.0000139654785,0.0000496537,0.000016853131,0.00027341652],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9990871,0.00014558868,0.00017591688,0.0003096927,0.000027010494,0.0002546716],"domain_scores_gemma":[0.9993361,0.000020646521,0.00014052051,0.0004270601,0.000045119297,0.000030509891],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009740014,0.00017530452,0.00016648557,0.000032093096,0.0001382039,0.00001622761,0.00021716763,0.00016542908,0.000025313688],"category_scores_gemma":[0.000023978642,0.00010199208,0.000073887175,0.00009726503,0.00063397124,0.0000029250925,0.0001368567,0.0001742223,0.0000049221308],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000063461746,0.00003900168,0.0045290077,0.0000058271976,0.00006865967,0.0000010077621,0.000029795261,0.0000027766416,0.98494476,0.000041502433,0.010150901,0.00012331517],"study_design_scores_gemma":[0.00043172538,0.00015427565,0.0054849563,0.000015262558,0.000032949778,0.00016062423,0.000036035395,2.8603034e-7,0.6902245,0.000007860936,0.30331635,0.00013514275],"about_ca_topic_score_codex":0.000019008208,"about_ca_topic_score_gemma":0.00016752114,"teacher_disagreement_score":0.29472023,"about_ca_system_score_codex":0.000009467195,"about_ca_system_score_gemma":0.000028207973,"threshold_uncertainty_score":0.41591164},"labels":[],"label_agreement":null},{"id":"W2115493975","doi":"10.1111/j.1574-6968.2011.02406.x","title":"Just scratching the surface: an expanding view of the Cpx envelope stress response","year":2011,"lang":"en","type":"review","venue":"FEMS Microbiology Letters","topic":"Vibrio bacteria research studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":189,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research; Fondation pour la Recherche Médicale","keywords":"Periplasmic space; Cell envelope; Cell biology; Biology; Regulon; Envelope (radar); Folding (DSP implementation); Computational biology; Genetics; Gene; Regulation of gene expression; Computer science; Engineering","score_opus":0.04875569386322094,"score_gpt":0.3288212679818147,"score_spread":0.2800655741185938,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2115493975","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.15162751,0.8459358,0.000015708882,0.0004612158,0.00060017983,0.00086455763,0.00045523973,0.000012225937,0.000027569627],"genre_scores_gemma":[0.0039478643,0.99418706,0.000120032455,0.00065226597,0.0002608507,0.000067743036,0.00041652148,0.000079417296,0.00026826895],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.99550635,0.002537161,0.00059860316,0.0006860227,0.000073465475,0.0005984123],"domain_scores_gemma":[0.9979087,0.00016883358,0.00050553965,0.0012832101,0.00007258719,0.00006110018],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0011385037,0.00053097284,0.0010144478,0.00006465723,0.00035112142,0.00003573891,0.0016255355,0.00044690736,0.000029445979],"category_scores_gemma":[0.00022017818,0.00028450016,0.00049791246,0.00019380733,0.00091058674,0.0000063664393,0.0011497841,0.0005784592,0.000020454867],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00016020703,0.00004984526,0.00011854805,0.0015370381,0.0007610155,0.000007002334,0.00036208212,0.0000030615981,0.9611361,0.0000060708303,0.006166214,0.029692816],"study_design_scores_gemma":[0.00018473681,0.000113487935,0.00015769654,0.0017379194,0.00020139803,0.00007750656,0.00008994026,6.6761324e-8,0.010491184,8.597903e-7,0.9865768,0.00036840566],"about_ca_topic_score_codex":0.00004838372,"about_ca_topic_score_gemma":0.000053581316,"teacher_disagreement_score":0.9804106,"about_ca_system_score_codex":0.00005703055,"about_ca_system_score_gemma":0.00027687583,"threshold_uncertainty_score":0.9999607},"labels":[],"label_agreement":null},{"id":"W2115990819","doi":"10.1016/j.femsle.2004.11.051","title":"Molecular cloning and functional analysis of two polyhydroxyalkanoate synthases from two strains of<i>Aeromonas hydrophila</i>spp.","year":2004,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"biodegradable polymer synthesis and properties","field":"Materials Science","cited_by":18,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Natural Science Foundation of China; Public Health Agency of Canada","keywords":"Aeromonas hydrophila; Polyhydroxyalkanoates; ATP synthase; Cloning (programming); Biology; Biochemistry; Escherichia coli; Bacteria; Microbiology; Gene; Chemistry; Genetics","score_opus":0.014012720059733665,"score_gpt":0.2167271380697387,"score_spread":0.20271441801000503,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2115990819","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9906879,0.0061622467,0.0011436539,0.0010496199,0.00023133795,0.000072075214,0.0005835458,0.00003003234,0.00003960319],"genre_scores_gemma":[0.9973714,0.000030454576,0.0015563099,0.00084651716,0.00004880607,0.000005586841,0.000115292896,0.000016253334,0.000009383624],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99852914,0.0001468891,0.00045524616,0.00045632364,0.0000927179,0.0003197124],"domain_scores_gemma":[0.9992131,0.00010491004,0.00027327373,0.00031467396,0.000033732354,0.000060330316],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002128618,0.00023094476,0.0005918043,0.00023274808,0.000107987056,0.00002426779,0.00020822795,0.00008898283,0.00030323045],"category_scores_gemma":[0.00002107345,0.00019159555,0.00019667097,0.00026137303,0.0006869084,0.00009180489,0.00009706021,0.00010583614,0.000018193938],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000049434046,0.000039488605,0.0016883359,0.000008795591,0.0005311681,0.000012515809,0.00020894408,0.0022111775,0.9948314,0.00012408156,0.000028385468,0.00026629967],"study_design_scores_gemma":[0.00057595636,0.000050556508,0.0014802635,0.00004355453,0.0005555427,0.000014980578,0.000034207693,0.00006521144,0.99682885,0.00007931297,0.0000625707,0.00020896125],"about_ca_topic_score_codex":0.004959967,"about_ca_topic_score_gemma":0.00019264942,"teacher_disagreement_score":0.0066835107,"about_ca_system_score_codex":0.000026687218,"about_ca_system_score_gemma":0.00004087141,"threshold_uncertainty_score":0.781304},"labels":[],"label_agreement":null},{"id":"W2116827759","doi":"10.1111/j.1574-6968.2006.00490.x","title":"Oral immunization of BALB/c mice by intragastric delivery of<i>Streptococcus gordonii</i>-expressing<i>Giardia</i>cyst wall protein 2 decreases cyst shedding in challenged mice","year":2006,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Parasitic Infections and Diagnostics","field":"Immunology and Microbiology","cited_by":23,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"","keywords":"Streptococcus gordonii; Giardia lamblia; Biology; Microbiology; Antibody; Cyst; Giardia; Antigen; Immunogenicity; Epitope; Immunization; Immunology; Streptococcaceae; Pathology; Medicine","score_opus":0.004658096812371972,"score_gpt":0.20083389368935545,"score_spread":0.19617579687698347,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2116827759","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9938668,0.0030943034,0.0009291764,0.0002920733,0.00035247876,0.0006760071,0.00044073124,0.00006026964,0.00028815787],"genre_scores_gemma":[0.9967748,0.00009495086,0.00062321185,0.00030848524,0.00003788086,0.00007635537,0.0019798917,0.000034005363,0.000070420436],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9973709,0.0005711974,0.0009020432,0.00048679247,0.000032106138,0.0006369681],"domain_scores_gemma":[0.99854124,0.0004530043,0.00051137764,0.00032234803,0.00014482405,0.000027207867],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0003330735,0.00037095352,0.0006945368,0.00040228403,0.00015593563,0.000014683949,0.0003379275,0.00050871394,0.00010138511],"category_scores_gemma":[0.000117494645,0.0003793097,0.00016567127,0.0003977997,0.0006579569,0.00015092769,0.00011179887,0.0004415093,0.000056668407],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014227197,0.00048758462,0.014083665,0.00005292414,0.00013203028,0.000019586041,0.00012530366,0.0002869033,0.9776098,0.000095238574,0.0065422514,0.0004224159],"study_design_scores_gemma":[0.003335033,0.0002428486,0.009639629,0.00031926914,0.00011881058,0.00023696573,0.00014642472,0.000014234704,0.9766674,0.000024692847,0.008745841,0.00050884223],"about_ca_topic_score_codex":0.0034610322,"about_ca_topic_score_gemma":0.00021931798,"teacher_disagreement_score":0.0044440357,"about_ca_system_score_codex":0.00012125421,"about_ca_system_score_gemma":0.000094222065,"threshold_uncertainty_score":0.9998659},"labels":[],"label_agreement":null},{"id":"W2118400381","doi":"10.1111/j.1574-6968.2004.tb09731.x","title":"The interaction of<i>Vatairea macrocarca</i>and<i>Rhizobium tropici</i>: net H<sup>+</sup>efflux stimulus and alteration of extracellular Na<sup>+</sup>concentration","year":2004,"lang":"fr","type":"article","venue":"FEMS Microbiology Letters","topic":"Legume Nitrogen Fixing Symbiosis","field":"Agricultural and Biological Sciences","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"Conselho Nacional de Desenvolvimento Científico e Tecnológico","keywords":"Efflux; Extracellular; Chemistry; Bacteria; Phaseolus; Biochemistry; Rhizobium; Lectin; Biology; Botany","score_opus":0.008475476437653864,"score_gpt":0.20356356939662634,"score_spread":0.19508809295897248,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2118400381","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9626452,0.005174404,0.0001506118,0.030556807,0.0005865779,0.00061508315,0.00021303944,0.000038232538,0.000020081863],"genre_scores_gemma":[0.99654967,0.00039480606,0.00039668794,0.0016620237,0.00043344183,0.000022445387,0.00033685614,0.00000941898,0.00019465017],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99709284,0.00052443094,0.00088843296,0.00068833266,0.00013615424,0.0006698349],"domain_scores_gemma":[0.9984921,0.00051494205,0.0005200623,0.00020689193,0.00014429707,0.00012165661],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004785171,0.0004372014,0.0005262441,0.000043464508,0.00046720429,0.00011663165,0.0003354161,0.0004038685,0.000087121334],"category_scores_gemma":[0.0001020505,0.0002389749,0.00019418304,0.00030081923,0.0012774271,0.00037862288,0.0001508472,0.00044093624,0.000030888667],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014784202,0.00011798657,0.008518493,0.00006270936,0.0001514556,0.000008183316,0.001573499,0.0011303007,0.9788927,0.0007805031,0.0011986063,0.0074177133],"study_design_scores_gemma":[0.0031734179,0.0019855385,0.010500111,0.0006164769,0.0004797818,0.0007106272,0.0024334765,0.0038433203,0.9528383,0.0004880902,0.021753035,0.0011778489],"about_ca_topic_score_codex":0.0015090038,"about_ca_topic_score_gemma":0.00009405389,"teacher_disagreement_score":0.033904508,"about_ca_system_score_codex":0.00015209537,"about_ca_system_score_gemma":0.0000458642,"threshold_uncertainty_score":0.9745114},"labels":[],"label_agreement":null},{"id":"W2118941129","doi":"10.1111/j.1574-6968.2004.tb09679.x","title":"Metabolism of octahydro-1,3,5,7-tetranitro-1,3,5,7-tetrazocine by<i>Clostridium bifermentans</i>strain HAW-1 and several other H<sub>2</sub>-producing fermentative anaerobic bacteria","year":2004,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Wastewater Treatment and Nitrogen Removal","field":"Environmental Science","cited_by":42,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Biotechnology Research Institute","funders":"Office of Naval Research; Strategic Environmental Research and Development Program; U.S. Navy","keywords":"Clostridium; Chemistry; Bacteria; Strain (injury); Formaldehyde; Metabolism; Nitrite; Anaerobic exercise; Microbial metabolism; Nitroso; Anaerobic bacteria; Biochemistry; Microbiology; Biology; Medicinal chemistry; Organic chemistry; Nitrate","score_opus":0.005333636156296314,"score_gpt":0.1865056093877011,"score_spread":0.1811719732314048,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2118941129","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9966269,0.00019424103,0.00009786213,0.0013868404,0.0004114231,0.0005493518,0.0006421216,0.00006465011,0.000026575251],"genre_scores_gemma":[0.99325275,0.0000456603,0.0037399319,0.0023425107,0.00011595673,0.000017811179,0.00037920143,0.00006165503,0.00004450924],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99749553,0.00017160486,0.00053471245,0.00088430184,0.00014350921,0.0007703472],"domain_scores_gemma":[0.99919295,0.0000391058,0.0002453453,0.00034789936,0.000011122139,0.0001635472],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00023048373,0.00053923886,0.000599811,0.00012254555,0.00018445874,0.000035343095,0.00030223926,0.00017963824,0.00032351978],"category_scores_gemma":[0.0000071996956,0.00047705197,0.0001643368,0.00028596376,0.0008613159,0.00028904414,0.00016918933,0.0002561515,0.000115349765],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000118045224,0.0001804849,0.0021068768,0.0000128739875,0.00023570593,0.000025339876,0.0013876833,0.0000814681,0.9935189,0.0000051185416,0.0021040782,0.00022340626],"study_design_scores_gemma":[0.0032216785,0.00019234503,0.008069912,0.000029117407,0.00012985255,0.00012169793,0.00015821573,0.0000017483046,0.9868506,0.000051005103,0.00071660127,0.0004572295],"about_ca_topic_score_codex":0.00037929136,"about_ca_topic_score_gemma":0.00007044522,"teacher_disagreement_score":0.006668322,"about_ca_system_score_codex":0.00027214194,"about_ca_system_score_gemma":0.00001913514,"threshold_uncertainty_score":0.99976814},"labels":[],"label_agreement":null},{"id":"W2120154703","doi":"10.1111/j.1574-6968.2002.tb11135.x","title":"Identification of lysine-78 as an essential residue in the<i>Saccharomyces cerevisiae</i>xylose reductase","year":2002,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Aldose Reductase and Taurine","field":"Biochemistry, Genetics and Molecular Biology","cited_by":12,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"Natural Sciences and Engineering Research Council of Canada; Korea Science and Engineering Foundation","keywords":"Saccharomyces cerevisiae; Biochemistry; Enzyme; Xylose; Active site; Residue (chemistry); Yeast; Aldehyde Reductase; Chemistry; Stereochemistry; Reductase; Lysine; Site-directed mutagenesis; Aldo-keto reductase; Amino acid; Mutant; Fermentation","score_opus":0.007227161235261056,"score_gpt":0.23514313944691614,"score_spread":0.2279159782116551,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2120154703","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9953337,0.00096563785,0.000033048007,0.0031323184,0.00016616467,0.00022040955,0.000061854946,0.00000850469,0.000078382145],"genre_scores_gemma":[0.99713063,0.00027007976,0.00008047629,0.0014115898,0.00031660436,0.000019356346,0.0006343129,0.0000171257,0.0001198192],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9985971,0.00024602338,0.0004083088,0.00042750247,0.000054770575,0.00026630113],"domain_scores_gemma":[0.9991316,0.00001495619,0.00020102577,0.0005776392,0.000038987033,0.00003574468],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002731762,0.00017732264,0.00020167617,0.00009066619,0.00006611633,0.000019643001,0.0003991319,0.00015460682,0.00008246045],"category_scores_gemma":[0.00004230523,0.00014612197,0.00009247124,0.00015527762,0.00025252084,0.000011342096,0.000059463706,0.00013223544,0.00005344123],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000044977176,0.00016054114,0.00041737827,0.000013796903,0.000049320097,0.000021525957,0.00021882591,0.000017442635,0.9876517,0.000045384593,0.011056331,0.00030276336],"study_design_scores_gemma":[0.00051814393,0.00014290886,0.00068078784,0.000012530309,0.00003443898,0.0002620464,0.00015367691,0.000008038019,0.9914652,0.000034265555,0.00649728,0.00019066756],"about_ca_topic_score_codex":0.00007204771,"about_ca_topic_score_gemma":0.000030114334,"teacher_disagreement_score":0.0045590503,"about_ca_system_score_codex":0.0000101998085,"about_ca_system_score_gemma":0.000017451543,"threshold_uncertainty_score":0.59586805},"labels":[],"label_agreement":null},{"id":"W2120365497","doi":"10.1111/j.1574-6968.2000.tb08886.x","title":"Evidence on the presence of two distinct alkaline phosphatases in<i>Serratia marcescens</i>","year":2000,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Alkaline Phosphatase Research Studies","field":"Medicine","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Department of National Defence; Defence Research and Development Canada","funders":"University of Sydney","keywords":"Serratia marcescens; Microbiology; Serratia; Alkaline phosphatase; Phosphatase; Chemistry; Enterobacteriaceae; Biology; Bacteria; Biochemistry; Escherichia coli; Enzyme; Genetics","score_opus":0.03848421390905727,"score_gpt":0.31143404116500456,"score_spread":0.2729498272559473,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2120365497","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.96152085,0.005485239,0.000015544456,0.031683195,0.00009986386,0.00072906783,0.00025027306,0.000032327167,0.0001836192],"genre_scores_gemma":[0.9898519,0.0012342423,0.00017983919,0.008030302,0.00011590421,0.000059127553,0.00017579677,0.00001990479,0.00033297433],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99818397,0.00026052378,0.00043349803,0.00043860252,0.00015622725,0.00052715914],"domain_scores_gemma":[0.99777204,0.0013382047,0.000110359535,0.0006426038,0.00006308785,0.000073730494],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0005905616,0.00024753218,0.00046437624,0.00009107625,0.000102568185,0.000009502484,0.0003672271,0.0000614803,0.0011256984],"category_scores_gemma":[0.0006780771,0.00015594318,0.000106261745,0.00035360333,0.0009907363,0.00007753711,0.00012190814,0.00043921397,0.00023563526],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0012756042,0.00028005408,0.037662618,0.000109026725,0.00017610428,0.0002885457,0.0003651516,0.00006174002,0.77587724,0.00011560226,0.18024342,0.0035448892],"study_design_scores_gemma":[0.009452022,0.002562118,0.19974826,0.007437088,0.00037197815,0.00073908316,0.00040718666,0.00038804798,0.65665436,0.0002583509,0.1205377,0.0014438236],"about_ca_topic_score_codex":0.00061244465,"about_ca_topic_score_gemma":0.00014233994,"teacher_disagreement_score":0.16208565,"about_ca_system_score_codex":0.00006878938,"about_ca_system_score_gemma":0.00006339546,"threshold_uncertainty_score":0.9997874},"labels":[],"label_agreement":null},{"id":"W2121566203","doi":"10.1111/j.1574-6968.2008.01289.x","title":"Localization of the ActIII actinorhodin polyketide ketoreductase to the cell wall","year":2008,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Microbial Natural Products and Biosynthesis","field":"Medicine","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Institute of Genetics","keywords":"Actinorhodin; Polyketide; Streptomyces coelicolor; Biology; Biochemistry; Polyketide synthase; Biosynthesis; Enzyme; Gene","score_opus":0.011860126183577962,"score_gpt":0.21055921793876692,"score_spread":0.19869909175518896,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2121566203","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9198818,0.00016270563,0.000049476213,0.07872553,0.00053646293,0.00048397176,0.000034499928,0.000022126917,0.00010342574],"genre_scores_gemma":[0.9684441,0.000034536035,0.00019825733,0.030091112,0.00025933163,0.0000016392615,0.0000321876,0.000016875678,0.00092195155],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99898106,0.00013606432,0.00025305606,0.00029032276,0.000061032108,0.0002784688],"domain_scores_gemma":[0.99918336,0.000064970554,0.00014004475,0.0004939538,0.00006373358,0.000053966978],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001668688,0.0001655335,0.00024066708,0.00006499273,0.00020624103,0.000004947643,0.00028046838,0.00011208551,0.00011382035],"category_scores_gemma":[0.000118317366,0.0000821677,0.00013459587,0.00028745743,0.0003087869,0.000027932721,0.00009464988,0.0002542714,0.00007472399],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011013574,0.000045808596,0.0015301921,0.000014997926,0.000027352287,0.0000054395578,0.00037677988,0.000021107127,0.8175535,0.0000018820255,0.1800411,0.00027169794],"study_design_scores_gemma":[0.0002721585,0.000051637828,0.00229375,0.000026809712,0.000046521956,0.00028676694,0.00003488961,0.0000025740887,0.8291346,5.552147e-7,0.1677557,0.00009404077],"about_ca_topic_score_codex":0.00019122682,"about_ca_topic_score_gemma":0.000019833426,"teacher_disagreement_score":0.048634417,"about_ca_system_score_codex":0.00005685409,"about_ca_system_score_gemma":0.000055334145,"threshold_uncertainty_score":0.33507016},"labels":[],"label_agreement":null},{"id":"W2122170012","doi":"10.1111/j.1574-6968.2008.01094.x","title":"The prpZ gene cluster encoding eukaryotic-type Ser/Thr protein kinases and phosphatases is repressed by oxidative stress and involved in Salmonella enterica serovar Typhi survival in human macrophages","year":2008,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Salmonella and Campylobacter epidemiology","field":"Agricultural and Biological Sciences","cited_by":35,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Université de Montréal","funders":"","keywords":"Salmonella enterica; Kinase; Phosphatase; Microbiology; Serotype; Gene; Biology; Oxidative stress; Salmonella; Bacteria; Cell biology; Genetics; Biochemistry; Phosphorylation","score_opus":0.02129225480396606,"score_gpt":0.22679941578982982,"score_spread":0.20550716098586375,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2122170012","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99304813,0.0024218538,0.0000013451764,0.0037035507,0.00012199398,0.00047131948,0.00019162807,0.000027844217,0.000012346823],"genre_scores_gemma":[0.9964619,0.00085796975,0.000050100312,0.0021086398,0.000071706505,0.000033622528,0.00033539865,0.00000383555,0.00007681025],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99769723,0.0006298366,0.00042633867,0.0006563154,0.000051413084,0.00053884933],"domain_scores_gemma":[0.9990349,0.00056019786,0.00018051437,0.00012456329,0.000028952583,0.00007088056],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00036289953,0.00028618722,0.0004294649,0.000029483108,0.00034796947,0.00003593957,0.00028828706,0.00018837523,0.00003342922],"category_scores_gemma":[0.000080981954,0.00012909352,0.00004489027,0.00022496622,0.0006452244,0.00009417772,0.00022520953,0.00026158436,0.0000054039488],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000105358384,0.000041749903,0.336742,0.0000061348096,0.00001731953,0.00003459682,0.0002098424,0.0000021286423,0.6612428,0.0000030231938,0.0013805006,0.00021456151],"study_design_scores_gemma":[0.0008756683,0.00037386577,0.67989075,0.00008148313,0.000011597749,0.00006689106,0.0005069138,0.0000134297825,0.31571233,0.00005618458,0.0019581642,0.00045273834],"about_ca_topic_score_codex":0.0015902142,"about_ca_topic_score_gemma":0.0010003154,"teacher_disagreement_score":0.34553045,"about_ca_system_score_codex":0.000033975593,"about_ca_system_score_gemma":0.000006438109,"threshold_uncertainty_score":0.5264281},"labels":[],"label_agreement":null},{"id":"W2123022248","doi":"10.1111/j.1574-6968.2000.tb08972.x","title":"Cloning, over-expression and purification of<i>Pseudomonas aeruginosa murC</i>encoding uridine diphosphate<i>N</i>-acetylmuramate: L-alanine ligase","year":2000,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Bacterial Genetics and Biotechnology","field":"Biochemistry, Genetics and Molecular Biology","cited_by":13,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"Global Health and Health Policy, Harvard University","keywords":"DNA ligase; Cloning (programming); Uridine diphosphate; Chemistry; Biochemistry; Uridine; Alanine; Molecular cloning; Pseudomonas aeruginosa; Molecular biology; Biology; Gene; Enzyme; Bacteria; Gene expression; Genetics; RNA; Amino acid; Computer science","score_opus":0.004636271855685902,"score_gpt":0.20151726278945736,"score_spread":0.19688099093377145,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2123022248","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.996872,0.0012508332,0.00007189776,0.0011011861,0.00024786347,0.00023500269,0.00008915936,0.00003478185,0.000097279764],"genre_scores_gemma":[0.99469745,0.0015301127,0.0017247063,0.0010786066,0.0001942401,0.000017937042,0.00054020167,0.000030004781,0.00018672836],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9985421,0.00007558929,0.0003774696,0.00057520904,0.000043986198,0.00038569517],"domain_scores_gemma":[0.9992578,0.000014059694,0.00018448549,0.0004345437,0.000035877056,0.000073233794],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00016177174,0.00027216383,0.00030136338,0.00006982341,0.000115069866,0.000021443382,0.00025815924,0.00044606198,0.00012814847],"category_scores_gemma":[0.000021093398,0.00024966695,0.00008618152,0.00010561234,0.00038197762,0.0000065533827,0.00013972464,0.00016673627,0.000014294125],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00017425505,0.000056902965,0.0017913482,0.000019020146,0.000042548083,0.0000053278895,0.000038406353,0.000017847935,0.99219626,0.00001679492,0.00334347,0.0022978357],"study_design_scores_gemma":[0.00079446397,0.00024256347,0.0020877325,0.000031555785,0.000022818847,0.00009884076,0.000009994966,0.000007636962,0.92737293,0.0000063008933,0.06906429,0.00026083883],"about_ca_topic_score_codex":0.000033723038,"about_ca_topic_score_gemma":0.0000058678197,"teacher_disagreement_score":0.06572082,"about_ca_system_score_codex":0.000011814357,"about_ca_system_score_gemma":0.000021893105,"threshold_uncertainty_score":0.9999955},"labels":[],"label_agreement":null},{"id":"W2124247856","doi":"10.1111/j.1574-6968.2000.tb09224.x","title":"Ribonuclease U2: cloning, production in<i>Pichia pastoris</i>and affinity chromatography purification of the active recombinant protein","year":2000,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Toxin Mechanisms and Immunotoxins","field":"Immunology and Microbiology","cited_by":9,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"Pichia pastoris; Recombinant DNA; Ribonuclease; Affinity chromatography; RNase P; Biochemistry; Pichia; Complementary DNA; Endoribonuclease; Amino acid; Biology; Yeast; Signal peptide; Molecular biology; FLAG-tag; Enzyme; RNA; Gene; Fusion protein","score_opus":0.005415136275009444,"score_gpt":0.18436336702825737,"score_spread":0.17894823075324792,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2124247856","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99494267,0.0005240223,0.0000068716627,0.0024466505,0.0011032509,0.00082633854,0.000039683033,0.00004219069,0.00006830054],"genre_scores_gemma":[0.99866104,0.00008111581,0.0001596274,0.00040433984,0.000028878878,0.000077955854,0.000066645785,0.0000204279,0.0004999658],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99827296,0.000455034,0.00040536735,0.00046697105,0.00001962826,0.0003800518],"domain_scores_gemma":[0.99921346,0.00003243543,0.00024997303,0.0004571266,0.000031438212,0.000015556021],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00028711982,0.0002318285,0.0003219473,0.00014494275,0.00023468994,0.000008563229,0.00028598163,0.00029684752,0.00025964604],"category_scores_gemma":[0.00004666223,0.00017835197,0.00011703475,0.00028176565,0.0005598235,0.000107685846,0.00006551192,0.00050311384,0.000067888424],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00020948375,0.0001789391,0.0017843024,0.000014999923,0.00007519292,0.000001043823,0.0007526866,0.0000046916007,0.99087083,0.00010503193,0.0012340186,0.004768777],"study_design_scores_gemma":[0.0010423884,0.00014998061,0.061497234,0.00010097572,0.000029834107,0.000086662716,0.00011307027,4.1954783e-7,0.9131308,0.000097111035,0.023526575,0.00022490537],"about_ca_topic_score_codex":0.00025782146,"about_ca_topic_score_gemma":0.00007320916,"teacher_disagreement_score":0.07773999,"about_ca_system_score_codex":0.000049203227,"about_ca_system_score_gemma":0.00003377251,"threshold_uncertainty_score":0.7272982},"labels":[],"label_agreement":null},{"id":"W2125442696","doi":"10.1111/j.1574-6968.1997.tb10201.x","title":"Analysis of the icsBA locus required for biosynthesis of the inner core region from Neisseria meningitidis lipopolysaccharide","year":2006,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Bacterial Genetics and Biotechnology","field":"Biochemistry, Genetics and Molecular Biology","cited_by":30,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"National Research Council Canada; Institute for Biological Sciences","funders":"","keywords":"Neisseria meningitidis; Lipopolysaccharide; Microbiology; Locus (genetics); Neisseriaceae; Biosynthesis; Inner core; Genetics; Biology; Gene; Bacteria; Antibiotics; Immunology; Physics","score_opus":0.009217967923779031,"score_gpt":0.20345050333979273,"score_spread":0.1942325354160137,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2125442696","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99536026,0.00022711635,0.00037508467,0.002851599,0.00043245606,0.00025734204,0.0004793355,0.0000072026733,0.00000959866],"genre_scores_gemma":[0.9985399,0.00002418725,0.0002944299,0.00062468904,0.00013593039,0.000014672141,0.00027586726,0.000018339955,0.00007198508],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9988759,0.00007815261,0.0003939377,0.0003724025,0.000031124473,0.00024848912],"domain_scores_gemma":[0.9987055,0.00003839022,0.00042318206,0.00074707303,0.000070559734,0.000015305422],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00010170573,0.0001820607,0.00034193395,0.000084056635,0.00008570374,0.00000680835,0.0005919756,0.00039319598,0.000008818621],"category_scores_gemma":[0.000057315974,0.00011489237,0.00041657628,0.00027955958,0.00054160523,0.0000018416338,0.00022381009,0.00008174453,5.2605367e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009373212,0.000031810276,0.010502784,0.0000053117674,0.0005265842,2.0251326e-7,0.000015840853,0.00006771909,0.9863621,0.00006574248,0.002110539,0.00021764012],"study_design_scores_gemma":[0.0002879177,0.00006155897,0.009063024,0.000012766535,0.00046488736,0.000004255966,0.000017649256,0.000016408134,0.98368925,0.00006136977,0.0061830124,0.0001378987],"about_ca_topic_score_codex":0.0004989297,"about_ca_topic_score_gemma":0.0004611087,"teacher_disagreement_score":0.0040724734,"about_ca_system_score_codex":0.000014273413,"about_ca_system_score_gemma":0.000032233496,"threshold_uncertainty_score":0.46851748},"labels":[],"label_agreement":null},{"id":"W2128856283","doi":"10.1111/j.1574-6968.2002.tb10994.x","title":"Identification of enteric pathogens by heat shock protein 60 kDa (HSP60) gene sequences","year":2002,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Salmonella and Campylobacter epidemiology","field":"Agricultural and Biological Sciences","cited_by":42,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia; Vancouver Hospital and Health Sciences Centre","funders":"","keywords":"Biology; Campylobacter jejuni; Microbiology; Shigella; Yersinia; Hypervariable region; Escherichia coli; Salmonella; Campylobacter; Heat shock protein; Yersinia enterocolitica; HSP60; Enterobacteriaceae; Gene; Bacteria; Restriction enzyme; Vibrio cholerae; Polymerase chain reaction; Genetics; Hsp70","score_opus":0.018041385057384222,"score_gpt":0.20223560251057834,"score_spread":0.18419421745319411,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2128856283","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99130815,0.0006341971,0.00003452138,0.0070949523,0.00024467698,0.00030191263,0.00029052718,0.00005361252,0.000037470094],"genre_scores_gemma":[0.9964862,0.00009002865,0.000054008564,0.0023963477,0.00013080619,0.00004114651,0.00036721534,0.000001980595,0.00043229366],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9981912,0.00033106285,0.0005282308,0.00047987848,0.000050948747,0.00041869306],"domain_scores_gemma":[0.99946254,0.000107468455,0.00020605118,0.00012032264,0.000039357816,0.00006422931],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00027692856,0.00020525361,0.00034007782,0.000021540594,0.00011706139,0.000017119173,0.000392201,0.00019424308,0.00063502195],"category_scores_gemma":[0.00003790116,0.00008325457,0.00013869224,0.00021649874,0.00027782132,0.00007073173,0.00006505372,0.000132481,0.00018711474],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000011193447,0.000058167865,0.006301823,0.000004428447,0.000024362322,0.000006045562,0.00006341611,0.000004194596,0.98077476,0.000004140065,0.010337805,0.0024096752],"study_design_scores_gemma":[0.00028954644,0.0003704098,0.030552521,0.000022980981,0.000032869833,0.00016197705,0.000116270254,0.000074198484,0.92379206,0.000046749614,0.0440306,0.0005098279],"about_ca_topic_score_codex":0.00013040158,"about_ca_topic_score_gemma":0.000030097279,"teacher_disagreement_score":0.0569827,"about_ca_system_score_codex":0.000033322896,"about_ca_system_score_gemma":0.000002103701,"threshold_uncertainty_score":0.6953045},"labels":[],"label_agreement":null},{"id":"W2129105382","doi":"10.1111/j.1574-6968.2005.00095.x","title":"<i>Plasmodium vivax</i>dihydrofolate reductase as a target of sulpha drugs","year":2006,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"HIV/AIDS drug development and treatment","field":"Medicine","cited_by":10,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Agence Universitaire de la Francophonie","keywords":"Dihydrofolate reductase; Dihydropteroate synthase; Pyrimethamine; Biology; Aminopterin; Mutant; Biochemistry; Enzyme; Plasmodium falciparum; Methotrexate; Gene","score_opus":0.0037829164808267732,"score_gpt":0.21009622957170515,"score_spread":0.2063133130908784,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2129105382","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97295487,0.0003204699,0.000044583838,0.023464829,0.0003389851,0.00039504995,0.00007274504,0.000082415885,0.0023260335],"genre_scores_gemma":[0.9805882,0.000018105758,0.0032421795,0.0032083269,0.00016468688,0.000027367696,0.0011562777,0.00003846168,0.011556377],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9985059,0.00006521196,0.00045059875,0.0004174915,0.000079982296,0.00048084825],"domain_scores_gemma":[0.9993222,0.000053916116,0.00016503528,0.00032339658,0.000049904113,0.00008554359],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015102346,0.00028724514,0.0005165917,0.00020726751,0.00007467104,0.0000072725265,0.00012677748,0.0001571525,0.00029793786],"category_scores_gemma":[0.000013742827,0.00024112375,0.00017181905,0.00020066935,0.00026489998,0.000048522696,0.000055519362,0.00018873812,0.000540584],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00018957842,0.0002240814,0.0059855212,0.00002888574,0.0002047172,0.00020633837,0.0003432948,0.000011442701,0.85345054,0.000065196444,0.13922434,0.00006605469],"study_design_scores_gemma":[0.003785825,0.0001355525,0.0010265999,0.00008685396,0.00017530046,0.00057173497,0.000067533525,0.00000711508,0.8378772,0.000099659104,0.1558354,0.0003311843],"about_ca_topic_score_codex":0.0001188005,"about_ca_topic_score_gemma":0.000004770468,"teacher_disagreement_score":0.020256503,"about_ca_system_score_codex":0.00010290301,"about_ca_system_score_gemma":0.00009918778,"threshold_uncertainty_score":0.9832741},"labels":[],"label_agreement":null},{"id":"W2129325232","doi":"10.1111/1574-6968.12629","title":"Differential expression of the seven rRNA operon promoters from the plant growth-promoting bacterium<i>Pseudomonas</i>sp. UW4","year":2014,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Legume Nitrogen Fixing Symbiosis","field":"Agricultural and Biological Sciences","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Waterloo","funders":"Natural Sciences and Engineering Research Council of Canada; Canadian Network for Research and Innovation in Machining Technology, Natural Sciences and Engineering Research Council of Canada","keywords":"Operon; Bacteria; Pseudomonas; Promoter; Biology; Microbiology; Ribosomal RNA; Gene expression; Genetics; Gene; Escherichia coli","score_opus":0.008870998656483404,"score_gpt":0.1696986334142465,"score_spread":0.1608276347577631,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2129325232","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9851155,0.000026806107,0.0000053880494,0.013486291,0.0006560702,0.0003271737,0.00031047358,0.000049824732,0.000022432652],"genre_scores_gemma":[0.9961119,0.0000026788061,0.00008327951,0.0030175068,0.00046140113,0.000017276334,0.00028344878,0.000004003991,0.000018485936],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.998042,0.0005986409,0.00035487543,0.00046283024,0.00010736718,0.00043429917],"domain_scores_gemma":[0.9989942,0.00041746767,0.00029158065,0.00021111117,0.000033732158,0.000051940708],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00023478518,0.00026122833,0.00030084315,0.000009121234,0.00034104064,0.0000463888,0.001070747,0.00018628998,0.00019541186],"category_scores_gemma":[0.00007584456,0.00007661824,0.00021690667,0.00013906285,0.0003075913,0.000074699405,0.0003994575,0.00031053743,0.000029639134],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000029480825,0.000040401264,0.020211257,0.0000041168314,0.000029804878,8.124866e-7,0.00044487906,1.6330335e-7,0.9754511,0.0000055212417,0.0031819162,0.00060053647],"study_design_scores_gemma":[0.00023855992,0.00007333836,0.09424185,0.00008924265,0.0000309619,0.000016912154,0.000056445435,0.0000053942763,0.90362597,0.000031515363,0.0013973679,0.00019243322],"about_ca_topic_score_codex":0.0006668642,"about_ca_topic_score_gemma":0.00011640927,"teacher_disagreement_score":0.07403059,"about_ca_system_score_codex":0.000030216048,"about_ca_system_score_gemma":0.000005547989,"threshold_uncertainty_score":0.31244013},"labels":[],"label_agreement":null},{"id":"W2129430260","doi":"10.1111/1574-6968.12599","title":"Sodium chloride-induced filamentation and alternative gene expression of<i>fts</i>,<i>murZ,</i>and<i>gnd</i>in<i>Listeria monocytogenes</i>08-5923 on vacuum-packaged ham","year":2014,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Listeria monocytogenes in Food Safety","field":"Biochemistry, Genetics and Molecular Biology","cited_by":22,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"Alberta Innovates; Alberta Innovates Bio Solutions; Alberta Livestock and Meat Agency","keywords":"Listeria monocytogenes; Filamentation; Flow cytometry; Food science; Protein filament; Gene; Gene expression; Microbiology; Biology; Chemistry; Molecular biology; Bacteria; Biochemistry; Genetics; Physics","score_opus":0.030801708645137663,"score_gpt":0.27526347004706075,"score_spread":0.2444617614019231,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2129430260","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9970476,0.00018622502,0.0006494721,0.00061795174,0.0008243083,0.0004541896,0.000107668086,0.000021237336,0.00009134778],"genre_scores_gemma":[0.99365467,0.000119257056,0.0013541239,0.0039208597,0.00032717516,0.000060365768,0.00046029652,0.000054597833,0.00004866747],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99764764,0.00035176912,0.00055489095,0.0009057877,0.00008217938,0.0004577527],"domain_scores_gemma":[0.9988583,0.00007634828,0.00033574598,0.00057416793,0.000053246826,0.00010223786],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0003924811,0.0004225771,0.00048059365,0.00014399303,0.000111455316,0.000029598474,0.0003154844,0.0003250809,0.000009960311],"category_scores_gemma":[0.00005499641,0.0004067067,0.00009954494,0.00009137148,0.00026733856,0.000017513263,0.00041465604,0.00018963797,0.000009494337],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00091090857,0.000055434735,0.005241779,0.000034723224,0.000055515236,0.000007783745,0.00026920103,0.000035226476,0.99262244,0.00001732216,0.0003825136,0.0003671828],"study_design_scores_gemma":[0.0024720833,0.0005405784,0.0060001453,0.000057101097,0.000028005084,0.000077190336,0.00004162088,0.000012014433,0.9871068,0.000033118333,0.003227895,0.0004034399],"about_ca_topic_score_codex":0.0000535919,"about_ca_topic_score_gemma":0.000031933672,"teacher_disagreement_score":0.005515601,"about_ca_system_score_codex":0.000051000177,"about_ca_system_score_gemma":0.000028454935,"threshold_uncertainty_score":0.9998385},"labels":[],"label_agreement":null},{"id":"W2130573633","doi":"10.1111/j.1574-6968.2008.01356.x","title":"CagA of<i>Helicobacter pylori</i>alters the expression and cellular distribution of host proteins involved in cell signaling","year":2008,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Helicobacter pylori-related gastroenterology studies","field":"Medicine","cited_by":11,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"Canadian Institutes of Health Research; Alberta Heritage Foundation for Medical Research","keywords":"CagA; Helicobacter pylori; Biology; Virulence; Microbiology; Membrane protein; Transmembrane protein; Lipid raft; Cell; Cell biology; Signal transduction; Biochemistry; Receptor; Gene; Genetics","score_opus":0.01352575756442959,"score_gpt":0.20784373082963178,"score_spread":0.1943179732652022,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2130573633","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9949571,0.00044506384,0.00034424878,0.003356908,0.0001732641,0.0006205317,0.0000732448,0.00002106724,0.000008598082],"genre_scores_gemma":[0.9980109,0.000094353636,0.00024184225,0.0013352162,0.00005894758,0.000033787182,0.00019084408,0.000019073852,0.000015058253],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9984333,0.00021048955,0.0005516748,0.00034091767,0.00007004711,0.00039359022],"domain_scores_gemma":[0.99918646,0.00010567628,0.00026976786,0.00029983756,0.00008357828,0.00005468147],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00024752217,0.00023440231,0.00052579993,0.00012078017,0.00009567236,0.0000024821009,0.0001361155,0.00019194499,0.0000073837164],"category_scores_gemma":[0.000049719027,0.00016683147,0.00009230523,0.00018435535,0.0009151198,0.000055232096,0.00012335888,0.00043625105,0.0000044643257],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002219359,0.00008087,0.25100172,0.000052024992,0.00006632685,0.000035626465,0.0010460962,0.0000080910495,0.746851,6.82929e-7,0.00062104093,0.000014592264],"study_design_scores_gemma":[0.0022977646,0.00032129933,0.115993604,0.00019006735,0.00006822359,0.00007645275,0.0002073308,0.0000041096177,0.8799546,0.0000010290928,0.0007627329,0.00012280759],"about_ca_topic_score_codex":0.00011783348,"about_ca_topic_score_gemma":0.00001350642,"teacher_disagreement_score":0.1350081,"about_ca_system_score_codex":0.00006435516,"about_ca_system_score_gemma":0.00003197024,"threshold_uncertainty_score":0.680319},"labels":[],"label_agreement":null},{"id":"W2131185922","doi":"10.1016/j.femsle.2005.02.025","title":"AvrPtoB: A bacterial type III effector that both elicits and suppresses programmed cell death associated with plant immunity","year":2005,"lang":"en","type":"review","venue":"FEMS Microbiology Letters","topic":"Plant Pathogenic Bacteria Studies","field":"Agricultural and Biological Sciences","cited_by":68,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Natural Sciences and Engineering Research Council of Canada; Triad Foundation; U.S. Department of Agriculture; National Science Foundation","keywords":"Pseudomonas syringae; Effector; Plant Immunity; Arabidopsis; Immunity; Biology; Programmed cell death; Type three secretion system; Cell biology; Plant defense against herbivory; Secretion; Hypersensitive response; Virulence; Microbiology; Pathogen; Gene; Immune system; Biochemistry; Immunology; Apoptosis; Mutant","score_opus":0.0360179783819047,"score_gpt":0.22862677631140127,"score_spread":0.19260879792949656,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2131185922","genre_codex":"empirical","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.56397223,0.4314782,1.0958333e-7,0.00010823368,0.00036620998,0.0009526977,0.002989185,0.00011369798,0.000019458512],"genre_scores_gemma":[0.0074633393,0.97345126,0.000063707965,0.00037651637,0.0005063531,0.00015148573,0.017871596,0.000012431008,0.00010330167],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9971903,0.00075529166,0.00042826912,0.00073782244,0.000078555815,0.00080979336],"domain_scores_gemma":[0.9982208,0.0009427239,0.00054657727,0.00013851754,0.000037883583,0.00011348184],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00031419462,0.00076708506,0.0018326158,0.000039376813,0.0003239321,0.00010511769,0.00050064264,0.0006050434,0.00010940859],"category_scores_gemma":[0.000051327337,0.0002796878,0.00021981413,0.00022716937,0.00027379848,0.000074785385,0.00028700914,0.00053757156,0.00004130869],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00020829988,0.00023043144,0.00067453,0.0006154218,0.0008988535,0.0000939409,0.00009423848,4.6568022e-8,0.82317024,9.401042e-7,0.0055652773,0.16844778],"study_design_scores_gemma":[0.0004931947,0.00038884074,0.0026062839,0.001829218,0.0006165858,0.0003305764,0.000011484418,9.8191606e-8,0.0004172452,1.9137585e-7,0.99252415,0.00078215334],"about_ca_topic_score_codex":0.0001471911,"about_ca_topic_score_gemma":0.0006423835,"teacher_disagreement_score":0.98695886,"about_ca_system_score_codex":0.00009695396,"about_ca_system_score_gemma":0.000035002686,"threshold_uncertainty_score":0.99996555},"labels":[],"label_agreement":null},{"id":"W2131507570","doi":"10.1111/1574-6968.12416","title":"Identification of VPA0451 as the specific chaperone for the<i>Vibrio parahaemolyticus</i>chromosome 1 type III-secreted effector VPA0450","year":2014,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Vibrio bacteria research studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"Canadian Institutes of Health Research","keywords":"Effector; Chaperone (clinical); Secretion; Type three secretion system; Biology; Vibrio parahaemolyticus; Cell biology; Virulence; Vibrio; Genetics; Microbiology; Gene; Biochemistry; Bacteria","score_opus":0.010151938061492526,"score_gpt":0.24693939344599902,"score_spread":0.2367874553845065,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2131507570","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9908252,0.0009783912,0.002002077,0.0044808122,0.00068349304,0.0009031224,0.00008750467,0.000016427644,0.000022971642],"genre_scores_gemma":[0.99680746,0.00026881087,0.00007684599,0.0014892833,0.0005201554,0.00012996225,0.00039387538,0.000032099502,0.00028151833],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9984689,0.00022600415,0.00035984945,0.0004457652,0.00007202935,0.00042746088],"domain_scores_gemma":[0.99858004,0.00028681103,0.00022194718,0.00072752504,0.0001425986,0.000041057217],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00063409156,0.00022405786,0.00027484627,0.00004381391,0.00025288004,0.000032921493,0.0005649289,0.00015125626,0.000025699475],"category_scores_gemma":[0.00024777514,0.00014045686,0.00015445713,0.00012729503,0.00071765645,0.0000055837336,0.00019780268,0.0001390576,0.00007726676],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00027097145,0.000021704145,0.00019458562,0.000020919711,0.00021142559,4.83222e-7,0.00010546349,0.00001900644,0.9826335,0.00006229734,0.016033314,0.00042635243],"study_design_scores_gemma":[0.0009145276,0.00040644658,0.0037137016,0.0000132524765,0.00004369225,0.000029861149,0.000039544833,0.000038508453,0.83118224,0.000013785519,0.16341169,0.00019277367],"about_ca_topic_score_codex":0.000024758967,"about_ca_topic_score_gemma":0.000014573186,"teacher_disagreement_score":0.15145126,"about_ca_system_score_codex":0.000026062728,"about_ca_system_score_gemma":0.000036448742,"threshold_uncertainty_score":0.5727665},"labels":[],"label_agreement":null},{"id":"W2132440445","doi":"10.1111/j.1574-6968.2000.tb08900.x","title":"Localization of heat shock proteins in clinical<i>Actinobacillus actinomycetemcomitans</i>strains and their effects on epithelial cell proliferation","year":2000,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Heat shock proteins research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":49,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia; Université Laval","funders":"Medical Research Council; Medical Research Council Canada; Helsingin Yliopisto","keywords":"GroEL; Actinobacillus; Periplasmic space; Heat shock protein; Cytoplasm; Biology; Microbiology; HSP60; Aggregatibacter actinomycetemcomitans; Bacterial outer membrane; Membrane ruffling; Cell; Cell biology; Molecular biology; Hsp70; Cytoskeleton; Biochemistry; Gene; Bacteria; Escherichia coli; Porphyromonas gingivalis; Genetics","score_opus":0.010035027921181494,"score_gpt":0.25508783224021936,"score_spread":0.24505280431903786,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2132440445","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99660504,0.0001077237,0.0009943327,0.00070939976,0.000085000356,0.0011976791,0.0000567882,0.000012600153,0.000231413],"genre_scores_gemma":[0.9977341,0.000117529344,0.00018028806,0.0013402363,0.00021225064,0.00008053729,0.00019824386,0.00002727218,0.00010953687],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9979608,0.00061657035,0.00045985886,0.00053333776,0.000053228472,0.0003761803],"domain_scores_gemma":[0.9993911,0.000072562114,0.00006681979,0.00035306253,0.00003956144,0.00007692022],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005169115,0.00022801122,0.00031333294,0.00010406239,0.00007249068,0.000013960195,0.00017403055,0.00036332832,0.000027769467],"category_scores_gemma":[0.00009757551,0.00019455973,0.000087987144,0.00012354225,0.00022247448,0.0000075148832,0.000054690987,0.00030091632,0.000017752594],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003918492,0.00013612404,0.0057523507,0.000058403446,0.000028625855,0.000005942685,0.00010774,0.00036192045,0.9799768,0.0000011501145,0.00026003123,0.012919105],"study_design_scores_gemma":[0.0018397104,0.0010097341,0.0020460382,0.000043988814,0.000004985338,0.000026127307,0.00001744216,0.0001239028,0.98949957,0.0000041843773,0.005189353,0.00019498942],"about_ca_topic_score_codex":0.0000463428,"about_ca_topic_score_gemma":0.00005131509,"teacher_disagreement_score":0.0127241155,"about_ca_system_score_codex":0.00003493109,"about_ca_system_score_gemma":0.000071917835,"threshold_uncertainty_score":0.7933915},"labels":[],"label_agreement":null},{"id":"W2134039055","doi":"10.1111/j.1574-6968.2007.00967.x","title":"<i>Escherichia coli</i>STb toxin and colibacillosis: knowing is half the battle","year":2007,"lang":"en","type":"review","venue":"FEMS Microbiology Letters","topic":"Escherichia coli research studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":57,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal","funders":"","keywords":"Enterotoxin; Microbiology; Escherichia coli; Enterotoxigenic Escherichia coli; Heat-stable enterotoxin; Toxin; Diarrhea; Biology; Enterobacteriaceae; Medicine; Gene","score_opus":0.030219167726590866,"score_gpt":0.30787484842482804,"score_spread":0.27765568069823715,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2134039055","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.005831315,0.9904224,0.000070370945,0.001537384,0.00065492484,0.0009062544,0.00017429526,0.000029233352,0.00037380925],"genre_scores_gemma":[0.00012624831,0.99020374,0.00037304818,0.0072282148,0.00064505276,0.00023146387,0.0003234652,0.000101062564,0.0007677139],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9969547,0.0004810624,0.0005737332,0.0009780697,0.00009961742,0.0009128441],"domain_scores_gemma":[0.9984183,0.0003359013,0.00027475154,0.0007699271,0.00007521675,0.0001259501],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0006918394,0.00070196425,0.0011632326,0.000115374656,0.0003573886,0.00006970391,0.00075657305,0.00072714436,0.00002899713],"category_scores_gemma":[0.00022432597,0.0004894825,0.00045943874,0.0002974963,0.00091352867,0.000004814439,0.00085278245,0.0007983396,0.00008087835],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000058287864,0.00009167764,0.000077037104,0.002979174,0.0024686616,0.00004727159,0.00021142945,8.8491026e-7,0.5916034,0.000025668905,0.2742786,0.1281579],"study_design_scores_gemma":[0.00025546516,0.00011153158,0.000011869774,0.0006199156,0.0002550858,0.00009388757,0.000036101123,3.8159132e-7,0.0014298286,7.56926e-7,0.99665624,0.0005289563],"about_ca_topic_score_codex":0.000044992725,"about_ca_topic_score_gemma":0.000050630573,"teacher_disagreement_score":0.7223776,"about_ca_system_score_codex":0.000069083,"about_ca_system_score_gemma":0.00022140329,"threshold_uncertainty_score":0.9997557},"labels":[],"label_agreement":null},{"id":"W2138112842","doi":"10.1111/j.1574-6968.2010.02034.x","title":"Histidine is a source of the antioxidant, α-ketoglutarate, in Pseudomonas fluorescens challenged by oxidative stress","year":2010,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Tryptophan and brain disorders","field":"Neuroscience","cited_by":59,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Laurentian University","funders":"Industry Canada","keywords":"Pseudomonas fluorescens; Biochemistry; Citric acid cycle; NAD+ kinase; Oxidative phosphorylation; Dehydrogenase; Oxidative stress; Biology; Reactive oxygen species; Metabolism; Isocitrate dehydrogenase; Enzyme; Chemistry; Bacteria","score_opus":0.010890831352446975,"score_gpt":0.22105825360795134,"score_spread":0.21016742225550436,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2138112842","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98913264,0.000054560012,0.000048116475,0.00958588,0.000480975,0.0003095586,0.00021066175,0.000036691257,0.00014089544],"genre_scores_gemma":[0.99275446,0.000027964676,0.000063924475,0.006778853,0.000035938658,0.000012536138,0.000009941818,0.000023194707,0.00029318756],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9984267,0.00023452872,0.00030564444,0.00052229466,0.00007295997,0.00043787246],"domain_scores_gemma":[0.99910647,0.00020211923,0.00019857057,0.00043003165,0.00001932742,0.00004350635],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012620277,0.00022950715,0.00027995667,0.00010913495,0.00010578253,0.000012442761,0.00066484633,0.00017302771,0.000116795294],"category_scores_gemma":[0.00018105558,0.00015469873,0.00010974063,0.00031362489,0.0010304118,0.00006755498,0.00015148366,0.0005860355,0.00003893008],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00003795572,0.0001378458,0.0027553854,0.000010945734,0.000007972893,0.000005414889,0.0009760003,0.0000058155483,0.98279154,0.00005229178,0.012985346,0.00023348168],"study_design_scores_gemma":[0.00082968746,0.000032877466,0.0053159026,0.000025839654,0.0000039265155,0.00002839353,0.000092447204,0.00001560434,0.9835144,0.000019128285,0.00992721,0.00019454418],"about_ca_topic_score_codex":0.00010905051,"about_ca_topic_score_gemma":0.00017149282,"teacher_disagreement_score":0.0036217975,"about_ca_system_score_codex":0.000022974766,"about_ca_system_score_gemma":0.000028782042,"threshold_uncertainty_score":0.63084316},"labels":[],"label_agreement":null},{"id":"W2138997537","doi":"10.1111/j.1574-6968.2001.tb10937.x","title":"Protein expression by planktonic and biofilm cells of<i>Streptococcus mutans</i>","year":2001,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Oral microbiology and periodontitis research","field":"Dentistry","cited_by":138,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba","funders":"Medical Research Council; Medical Research Council Canada; Pathological Society of Great Britain and Ireland","keywords":"Biofilm; Streptococcus mutans; Microbiology; Bacteria; Biology; Chemostat; Biochemistry; Amino acid; Chemistry; Genetics","score_opus":0.009285099067161795,"score_gpt":0.24094794608927522,"score_spread":0.23166284702211343,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2138997537","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99647266,0.0009509398,0.00009307529,0.0006756178,0.0003656517,0.0005116206,0.0006733489,0.000054388674,0.0002026978],"genre_scores_gemma":[0.99637336,0.00007961281,0.00027059842,0.0008836874,0.00007129004,0.000044110504,0.00036920415,0.00002648373,0.0018816805],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9982735,0.00026427582,0.00035828954,0.0005132332,0.000045440232,0.00054526044],"domain_scores_gemma":[0.9993046,0.000077088414,0.00014771837,0.00034382995,0.000043521726,0.000083246545],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00020548626,0.00024512742,0.00038072446,0.00011759835,0.00014271244,0.000026104766,0.0003228666,0.00038275734,0.00087863894],"category_scores_gemma":[0.000021854912,0.00021482132,0.000081772625,0.00017804207,0.0006677003,0.000089222354,0.0001696415,0.00040825023,0.00032693535],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012823296,0.00005247002,0.020220226,0.00002810474,0.000039731287,0.00010722435,0.000053416927,9.925512e-7,0.9014903,0.0000057974057,0.07751934,0.00035419536],"study_design_scores_gemma":[0.0008181536,0.000108707776,0.0014924703,0.00005830465,0.0000089949735,0.00030673,0.000027250468,0.0000010097165,0.8918554,0.000005330422,0.10509638,0.0002212488],"about_ca_topic_score_codex":0.00012297812,"about_ca_topic_score_gemma":0.000040434057,"teacher_disagreement_score":0.027577035,"about_ca_system_score_codex":0.00002950185,"about_ca_system_score_gemma":0.000028552851,"threshold_uncertainty_score":0.96204805},"labels":[],"label_agreement":null},{"id":"W2139198192","doi":"10.1016/j.femsle.2005.01.055","title":"Identification of<i>N</i>-acylhomoserine lactones in mucopurulent respiratory secretions from cystic fibrosis patients","year":2005,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Cystic Fibrosis Research Advances","field":"Medicine","cited_by":99,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Health Sciences Centre; University of Calgary","funders":"","keywords":"Quorum sensing; Pseudomonas aeruginosa; Cystic fibrosis; Lactone; Homoserine; Microbiology; Burkholderia; Burkholderia cepacia complex; Virulence; Bacteria; Chemistry; Pseudomonas; Biology; Biochemistry; Gene","score_opus":0.009576617664007022,"score_gpt":0.2667174862390951,"score_spread":0.25714086857508806,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2139198192","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9959792,0.0004709648,0.00036595782,0.0021070382,0.00019230242,0.00047590034,0.00034838586,0.000038151004,0.000022118817],"genre_scores_gemma":[0.9954538,0.000025887492,0.0023751634,0.0012012642,0.00012404683,0.000051736457,0.0007022582,0.000023067692,0.00004278629],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9983728,0.00013821942,0.00063748885,0.00039010256,0.000118257645,0.00034315742],"domain_scores_gemma":[0.99900997,0.00021227705,0.00019487245,0.00040036402,0.000098500546,0.00008402969],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00019765503,0.00017279458,0.0003678286,0.0002680567,0.000045697303,0.000010001918,0.00016619089,0.00010736394,0.00017692846],"category_scores_gemma":[0.00029653445,0.00016311904,0.000089261404,0.00026182146,0.00027889718,0.00012453663,0.00007759958,0.00023217268,0.0001509963],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002714266,0.00020241465,0.07974322,0.00003877435,0.000035163237,0.0000051201505,0.00017444782,0.00007466357,0.916184,0.000004467971,0.0016429881,0.001623312],"study_design_scores_gemma":[0.002810876,0.0002549941,0.6324707,0.00019534619,0.000045372017,0.000008026804,0.000048520895,0.000071252296,0.3336098,0.000016462449,0.030247979,0.00022064854],"about_ca_topic_score_codex":0.00012517608,"about_ca_topic_score_gemma":0.00011666011,"teacher_disagreement_score":0.58257425,"about_ca_system_score_codex":0.00020153151,"about_ca_system_score_gemma":0.0000433897,"threshold_uncertainty_score":0.6651801},"labels":[],"label_agreement":null},{"id":"W2139251535","doi":"10.1111/j.1574-6968.2009.01651.x","title":"The major outer membrane protein OprG of<i>Pseudomonas aeruginosa</i>contributes to cytotoxicity and forms an anaerobically regulated, cation-selective channel","year":2009,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Bacterial biofilms and quorum sensing","field":"Biochemistry, Genetics and Molecular Biology","cited_by":65,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"Pseudomonas aeruginosa; Bacterial outer membrane; Chemistry; Cytotoxic T cell; Regulator; Microbiology; Cytotoxicity; Bacteria; Membrane; Biophysics; Cell biology; Membrane protein; Biology; Biochemistry; Escherichia coli; In vitro; Gene; Genetics","score_opus":0.004553585494224108,"score_gpt":0.20481487782005828,"score_spread":0.20026129232583417,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2139251535","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99080414,0.00016848114,0.0003076782,0.007848207,0.0001246311,0.0006525426,0.00005468634,0.000017001448,0.00002261845],"genre_scores_gemma":[0.9940687,0.000020358459,0.0007966313,0.0046616946,0.00013308194,0.000017302247,0.00021990809,0.000015900216,0.00006646653],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99865603,0.000111532674,0.00030984243,0.0004601231,0.000035588513,0.00042686492],"domain_scores_gemma":[0.9992981,0.000017980477,0.00013831443,0.00035256875,0.000107001666,0.00008604944],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002580848,0.00023008145,0.0002599966,0.000055712222,0.00022562391,0.00004157713,0.00021737484,0.00024871834,0.0000013373268],"category_scores_gemma":[0.000050461094,0.00016691726,0.00007561892,0.00011644591,0.000230815,0.000010686949,0.00007782428,0.00012759009,0.0000029511025],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00036002742,0.000036877558,0.00008454111,0.0000039078295,0.00008184274,0.0000025130228,0.0000827407,0.000007968939,0.99781,0.00010630941,0.0008722489,0.00055102736],"study_design_scores_gemma":[0.00062803185,0.00051285524,0.0053433003,0.000019609817,0.000019584762,0.00005309974,0.000024140083,0.0000032978471,0.9909536,0.00003461113,0.0021879696,0.00021987002],"about_ca_topic_score_codex":0.00005527096,"about_ca_topic_score_gemma":0.00013992056,"teacher_disagreement_score":0.006856365,"about_ca_system_score_codex":0.000023009905,"about_ca_system_score_gemma":0.00003512369,"threshold_uncertainty_score":0.68066883},"labels":[],"label_agreement":null},{"id":"W2139553951","doi":"10.1016/j.femsle.2005.06.034","title":"Silicon and plant disease resistance against pathogenic fungi","year":2005,"lang":"en","type":"review","venue":"FEMS Microbiology Letters","topic":"Silicon Effects in Agriculture","field":"Agricultural and Biological Sciences","cited_by":698,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Agriculture and Agri-Food Canada; Université Laval","funders":"Natural Sciences and Engineering Research Council of Canada; Canada Research Chairs","keywords":"Signal transduction; Regulator; Cell biology; Plant defense against herbivory; Abiotic component; Biology; Second messenger system; Silicon; Biotic stress; Enzyme; Cell wall; Plant disease resistance; Abiotic stress; Biophysics; Biochemistry; Chemistry; Ecology; Gene","score_opus":0.01634754805279107,"score_gpt":0.2254002766761243,"score_spread":0.20905272862333324,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2139553951","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.032727007,0.9626794,8.6140936e-8,0.0008855389,0.00040372313,0.0008623045,0.002241499,0.00013374788,0.00006673287],"genre_scores_gemma":[0.0003116201,0.990935,0.000024255934,0.0029820192,0.0010540953,0.00011991376,0.0041916873,0.000006085933,0.00037529596],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99725723,0.00047440678,0.0005144645,0.0010314544,0.00007416149,0.00064830575],"domain_scores_gemma":[0.99860686,0.00058888586,0.00036044343,0.00018621607,0.000020516572,0.00023707275],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00021839573,0.00069381256,0.0012520183,0.00003426557,0.00021777667,0.00006841906,0.0005883452,0.0005677707,0.0000906889],"category_scores_gemma":[0.00004883647,0.00023935587,0.00048530952,0.0002808861,0.00026078353,0.000063290354,0.00019991912,0.00056847214,0.00018560748],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000015772634,0.00003641475,0.00003611857,0.00062919664,0.00009237412,0.00009101095,0.000012944442,2.44511e-7,0.09079891,0.000010401209,0.025852699,0.88242394],"study_design_scores_gemma":[0.000085998625,0.000026034968,0.0005279742,0.0016847852,0.00022026309,0.000064188134,0.000006006977,1.4932395e-7,0.000013492642,0.0000016982589,0.9967579,0.0006114596],"about_ca_topic_score_codex":0.0000052683663,"about_ca_topic_score_gemma":0.00015269461,"teacher_disagreement_score":0.97090524,"about_ca_system_score_codex":0.00010590437,"about_ca_system_score_gemma":0.000019839665,"threshold_uncertainty_score":0.9760649},"labels":[],"label_agreement":null},{"id":"W2139813657","doi":"10.1016/j.femsle.2005.08.030","title":"Survival of<i>Escherichia coli</i>O157:H7 in feces from corn- and barley-fed steers","year":2005,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Listeria monocytogenes in Food Safety","field":"Biochemistry, Genetics and Molecular Biology","cited_by":53,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Agriculture Food and Rural Development; Agriculture and Agri-Food Canada","funders":"Agriculture and Agri-Food Canada; Public Health Agency; Public Health Agency of Canada","keywords":"Feces; Escherichia coli; Biology; Food science; Microbiology; Animal science; Agronomy; Biochemistry","score_opus":0.022321680596250525,"score_gpt":0.2557429867027598,"score_spread":0.23342130610650927,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2139813657","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99669313,0.00091942126,0.00016535209,0.0011287223,0.00049363583,0.00020682797,0.00021114132,0.000013662156,0.00016807929],"genre_scores_gemma":[0.9939516,0.0001301899,0.0018711934,0.0032648975,0.00025262867,0.000014428986,0.00042638273,0.000029937664,0.000058695216],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9985079,0.00019618694,0.0003813811,0.00052517466,0.000040706487,0.0003486288],"domain_scores_gemma":[0.999337,0.000047707716,0.00014605118,0.00038027216,0.000027697959,0.00006124541],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00020312156,0.00024579078,0.00035228248,0.000058419366,0.000042112162,0.000012819586,0.000295033,0.0002849531,0.00002874955],"category_scores_gemma":[0.000033010692,0.00024810247,0.00008016879,0.00008353913,0.00036485534,0.0000072944235,0.00026091197,0.00014228193,0.0000118881],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00030404024,0.00003789288,0.040861268,0.000008591957,0.00009960852,0.00000438772,0.00011671328,0.000046378012,0.95673895,0.000009618143,0.001337372,0.00043518958],"study_design_scores_gemma":[0.0020584592,0.00023254303,0.04618371,0.000022843065,0.000034689092,0.000017813092,0.00011318827,0.000013288451,0.8844085,0.000007453376,0.06645565,0.0004519139],"about_ca_topic_score_codex":0.0001483943,"about_ca_topic_score_gemma":0.0004873412,"teacher_disagreement_score":0.07233049,"about_ca_system_score_codex":0.00003143559,"about_ca_system_score_gemma":0.00004360526,"threshold_uncertainty_score":0.99999714},"labels":[],"label_agreement":null},{"id":"W2140213642","doi":"10.1111/j.1574-6968.2001.tb10711.x","title":"<i>Lentinula edodes</i>produces a multicomponent protein complex containing manganese (II)-dependent peroxidase, laccase and β-glucosidase","year":2001,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Enzyme-mediated dye degradation","field":"Agricultural and Biological Sciences","cited_by":30,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canadian Forest Service","funders":"","keywords":"Lentinula; Chemistry; Size-exclusion chromatography; Polyacrylamide gel electrophoresis; Peroxidase; Gel electrophoresis; Sodium dodecyl sulfate; Molecular mass; Laccase; Manganese peroxidase; Chromatography; Biochemistry; Enzyme; Food science","score_opus":0.018510266483501053,"score_gpt":0.2061794812969926,"score_spread":0.18766921481349155,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2140213642","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9866108,0.0002533378,0.00001288097,0.011934263,0.0001720692,0.0007105977,0.00010844044,0.0001604073,0.000037234295],"genre_scores_gemma":[0.99419653,0.000031386026,0.0002884251,0.0038884894,0.00029276247,0.000073494244,0.0010220244,0.0000045828233,0.00020227383],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99793506,0.00026743574,0.00038666028,0.0007084596,0.00010620394,0.0005961919],"domain_scores_gemma":[0.99931425,0.00014633875,0.00020230853,0.00013221997,0.000059312784,0.00014554613],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00036611405,0.00032663738,0.00033642023,0.000046047575,0.00045329117,0.00007889029,0.00028573856,0.00017368028,0.00022891021],"category_scores_gemma":[0.00006140753,0.0001571945,0.00008779904,0.00020020759,0.00024581363,0.00016673912,0.00021183523,0.0002810747,0.00007689501],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012083606,0.0001463557,0.0053877397,0.000007574613,0.0000313928,0.00012454345,0.00020114654,0.0000063934717,0.98897284,0.000014049067,0.001423842,0.003563265],"study_design_scores_gemma":[0.0046485476,0.0015071486,0.19787063,0.00025457164,0.00014845154,0.0017862458,0.0016907321,0.00034761766,0.68248665,0.000059390968,0.10681753,0.0023824763],"about_ca_topic_score_codex":0.00040369638,"about_ca_topic_score_gemma":0.0006912098,"teacher_disagreement_score":0.3064862,"about_ca_system_score_codex":0.000054459626,"about_ca_system_score_gemma":0.0000058337578,"threshold_uncertainty_score":0.64102054},"labels":[],"label_agreement":null},{"id":"W2140619881","doi":"10.1016/j.femsle.2005.02.022","title":"A hyperactive, Ca<sup>2+</sup>-dependent antifreeze protein in an Antarctic bacterium","year":2005,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Physiological and biochemical adaptations","field":"Environmental Science","cited_by":174,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Queen's University","funders":"Canadian Institutes of Health Research","keywords":"Antifreeze protein; Freezing point; Ice crystals; Bacteria; Antifreeze; Freezing-point depression; Chemistry; Food science; Biology; Biophysics; Biochemistry; Genetics; Physics; Organic chemistry; Meteorology; Thermodynamics","score_opus":0.010561769127882622,"score_gpt":0.21012615875410037,"score_spread":0.19956438962621775,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2140619881","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99429035,0.000008395477,0.000024901017,0.0051035993,0.00003296144,0.00029891432,0.000045582536,0.000040025545,0.00015529257],"genre_scores_gemma":[0.991827,0.0000024521341,0.0015653606,0.006188573,0.00009102214,0.0000464181,0.00013232515,0.000010328616,0.00013653119],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99859893,0.00013321452,0.00023961083,0.0005187454,0.00005719168,0.00045232175],"domain_scores_gemma":[0.9995794,0.000035841418,0.000059274724,0.00022480481,0.000005249596,0.00009541614],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00010096784,0.00019404039,0.00020336571,0.00003734577,0.000081747545,0.000017440077,0.00031695148,0.00012907339,0.0016074288],"category_scores_gemma":[0.000019925637,0.00015200017,0.00005770557,0.0001501291,0.00033123195,0.00025183556,0.00016996426,0.00029499133,0.0012540187],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000044548473,0.00024244234,0.0050744773,0.000002053221,0.0000066087055,0.0000129930495,0.00019760743,0.0017724625,0.9912052,0.0000024344235,0.0006630562,0.0007761001],"study_design_scores_gemma":[0.0024533952,0.00059579266,0.21633926,0.000056749785,0.00003115983,0.00018040456,0.00031117146,0.003031434,0.7439228,0.00029824502,0.031175196,0.0016043748],"about_ca_topic_score_codex":0.00039318582,"about_ca_topic_score_gemma":0.00018757865,"teacher_disagreement_score":0.2472824,"about_ca_system_score_codex":0.00018197604,"about_ca_system_score_gemma":0.000006437698,"threshold_uncertainty_score":0.99952364},"labels":[],"label_agreement":null},{"id":"W2142207400","doi":"10.1111/j.1574-6968.2002.tb11403.x","title":"Cloning and characterization of the<i>Burkholderia vietnamiensis norM</i>gene encoding a multi-drug efflux protein","year":2002,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Antibiotic Resistance in Bacteria","field":"Biochemistry, Genetics and Molecular Biology","cited_by":37,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Western University","funders":"Canadian Institutes of Health Research","keywords":"Efflux; Mutant; Burkholderia; Biology; Escherichia coli; Microbiology; Polymyxin B; Molecular biology; Gene; Antibiotics; Genetics; Bacteria","score_opus":0.00821508662179389,"score_gpt":0.19319721901507125,"score_spread":0.18498213239327738,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2142207400","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9978678,0.00013932241,0.0005576547,0.0007303393,0.0002742429,0.00034914035,0.000050358165,0.000011527828,0.000019578587],"genre_scores_gemma":[0.9970051,0.000059332244,0.0014050374,0.0008887308,0.0001017764,0.000009854793,0.00010846056,0.000024042038,0.0003976586],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99891907,0.00012109138,0.00028237625,0.0003742994,0.00003492336,0.00026821022],"domain_scores_gemma":[0.99934775,0.000008577021,0.00022806508,0.00034368012,0.000038881582,0.000033044005],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012345563,0.00018720323,0.00020616244,0.00003847162,0.000120280085,0.000016916905,0.00021446828,0.00014620017,0.000020244668],"category_scores_gemma":[0.000042474217,0.00015376136,0.00007946774,0.00008882661,0.00031474914,0.0000070642536,0.00015479526,0.000105357394,0.0000063627617],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000016851385,0.00002702186,0.016223993,0.00002375542,0.000040246574,0.0000013854999,0.00016179857,0.0000022492072,0.98312575,0.0000031234958,0.00027471982,0.00009911942],"study_design_scores_gemma":[0.0004505307,0.000030267822,0.025458353,0.00005588872,0.000015599835,0.000047407568,0.000018075341,0.000026985594,0.97122496,4.6553788e-7,0.0024964318,0.00017501645],"about_ca_topic_score_codex":0.000009297684,"about_ca_topic_score_gemma":0.000010624506,"teacher_disagreement_score":0.0119007565,"about_ca_system_score_codex":0.00001569036,"about_ca_system_score_gemma":0.000009849674,"threshold_uncertainty_score":0.6270206},"labels":[],"label_agreement":null},{"id":"W2142380475","doi":"10.1111/j.1574-6968.2009.01570.x","title":"The serine/threonine protein kinase PknI controls the growth of<i>Mycobacterium tuberculosis</i>upon infection","year":2009,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Tuberculosis Research and Epidemiology","field":"Medicine","cited_by":47,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"Canadian Institutes of Health Research; British Columbia Centre for Disease Control; Council of Scientific and Industrial Research, India","keywords":"Mycobacterium tuberculosis; Mutant; Kinase; Threonine; Biology; Serine; Microbiology; Tuberculosis; Protein kinase A; Infectivity; Phenotype; Phosphorylation; Biochemistry; Gene; Virology; Medicine","score_opus":0.009555403046907694,"score_gpt":0.2581405071649331,"score_spread":0.2485851041180254,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2142380475","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.83118725,0.0006340982,0.00009712632,0.16651548,0.00024021466,0.0010425722,0.00002267443,0.00006263058,0.00019794141],"genre_scores_gemma":[0.981047,0.00036437903,0.000097199976,0.017716797,0.0004088275,0.000108650085,0.00010863975,0.000020670876,0.00012787897],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9975099,0.00066254445,0.0005578673,0.0003900952,0.000098089884,0.00078149664],"domain_scores_gemma":[0.99858505,0.00033037868,0.0002076907,0.00058529037,0.00016102678,0.00013056843],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010799923,0.00028291083,0.0005626713,0.00011342407,0.00029063274,0.00002177104,0.00026052908,0.00021900376,0.00004557188],"category_scores_gemma":[0.00072550686,0.00015014739,0.0002803775,0.000266182,0.00052266393,0.00007181843,0.00007178013,0.0006749604,0.00008305014],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0007245175,0.0000921321,0.012876005,0.000028083392,0.00016831844,0.000021136719,0.000042944157,0.000006683365,0.9641421,0.00038583082,0.019909214,0.0016030569],"study_design_scores_gemma":[0.0057018395,0.003291972,0.5357101,0.00023628079,0.00031755096,0.0014959819,0.000041423158,0.000105441024,0.28725934,0.00041706653,0.16480604,0.0006169987],"about_ca_topic_score_codex":0.00040442235,"about_ca_topic_score_gemma":0.000094308896,"teacher_disagreement_score":0.67688274,"about_ca_system_score_codex":0.0001036689,"about_ca_system_score_gemma":0.00006060213,"threshold_uncertainty_score":0.61228323},"labels":[],"label_agreement":null},{"id":"W2142673726","doi":"10.1016/j.femsle.2004.11.024","title":"The presence of the<i>tet</i>gene from cloning vectors impairs<i>Salmonella</i>survival in macrophages","year":2004,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Salmonella and Campylobacter epidemiology","field":"Agricultural and Biological Sciences","cited_by":10,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal","funders":"National Institute of Allergy and Infectious Diseases; Natural Sciences and Engineering Research Council of Canada; National Institutes of Health","keywords":"Complementation; Cloning (programming); Biology; Plasmid; Microbiology; Salmonella; Virulence; Mutagenesis; Gene; Tetracycline; Molecular biology; Mutant; Genetics; Bacteria; Antibiotics","score_opus":0.01049087377517269,"score_gpt":0.2005942409844921,"score_spread":0.19010336720931942,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2142673726","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98907423,0.0010302287,0.000005801464,0.008425322,0.0010946566,0.0002251039,0.00008344595,0.000031708296,0.000029507131],"genre_scores_gemma":[0.9977753,0.00011620258,0.000059690166,0.0017296947,0.00022526942,0.000014815797,0.000047145077,0.000002432434,0.000029405539],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9979658,0.0005005507,0.0004567367,0.0004357962,0.00006945444,0.0005716767],"domain_scores_gemma":[0.9983809,0.0011070939,0.00024057584,0.00019577939,0.000025756948,0.000049868686],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00045990883,0.00022614101,0.00035014935,0.000012660023,0.000281592,0.000020913874,0.0008834654,0.00018527123,0.000032189724],"category_scores_gemma":[0.000110773406,0.000073509465,0.00019044157,0.0003171924,0.00058654184,0.000045403587,0.00023515108,0.0003132127,0.000026624044],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000042385247,0.00002746881,0.1144416,0.0000010706,0.000022678109,0.000007865894,0.00013390093,0.00015542642,0.8840097,0.000035000216,0.00034072463,0.0007821601],"study_design_scores_gemma":[0.00042765547,0.00009077897,0.75976324,0.000037412858,0.000015657135,0.000033383156,0.00019197808,0.0000026884193,0.23195346,0.00060883205,0.006623347,0.00025154822],"about_ca_topic_score_codex":0.003216665,"about_ca_topic_score_gemma":0.0020880667,"teacher_disagreement_score":0.6520563,"about_ca_system_score_codex":0.000052299347,"about_ca_system_score_gemma":0.000014651599,"threshold_uncertainty_score":0.48626566},"labels":[],"label_agreement":null},{"id":"W2143197189","doi":"10.1111/j.1574-6968.2007.00637.x","title":"Multiple gene genealogies reveal important relationships between species of<i>Phaeophleospora</i>infecting<i>Eucalyptus</i>leaves","year":2007,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Plant Pathogens and Fungal Diseases","field":"Biochemistry, Genetics and Molecular Biology","cited_by":34,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Agriculture and Agri-Food Canada; Murdoch University; University of Pretoria; Australian Research Council; Université Laval","keywords":"Mycosphaerella; Eucalyptus; Biology; Subtropics; Quarantine; Botany; Phylogenetic tree; Biosecurity; Gene; Ecology; Genetics","score_opus":0.018467894801344916,"score_gpt":0.22220917339847684,"score_spread":0.20374127859713193,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2143197189","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9942452,0.0014332774,0.0017625401,0.00017759601,0.0002810195,0.00021974609,0.0017070078,0.00003721942,0.00013639743],"genre_scores_gemma":[0.99379265,0.00014184757,0.0023458756,0.0005429845,0.000499565,0.000006027891,0.0025060559,0.000029486175,0.00013552903],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9981939,0.00012655712,0.0006119342,0.0004893227,0.00006486908,0.0005133949],"domain_scores_gemma":[0.99891645,0.00017018386,0.00032292603,0.00040149436,0.000070369504,0.00011855406],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.000611304,0.00027776617,0.00035731512,0.00011666719,0.0001710182,0.000011941683,0.0002615458,0.00030177482,0.000011015845],"category_scores_gemma":[0.00027633895,0.00025946714,0.00022137392,0.00013973271,0.0003468801,0.0000069068633,0.0001380526,0.00021940943,0.000016491467],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000056888253,0.000024610394,0.4474544,0.000009838063,0.000077190765,0.000018553776,0.00003651304,0.000010384505,0.5498144,0.000008879954,0.0024261512,0.00006223544],"study_design_scores_gemma":[0.00036509323,0.00009529948,0.465042,0.000011822361,0.000051179897,0.000056871897,0.00007904007,6.28399e-7,0.52664465,0.000011713921,0.007386515,0.0002551661],"about_ca_topic_score_codex":0.00003229576,"about_ca_topic_score_gemma":0.000059396163,"teacher_disagreement_score":0.023169706,"about_ca_system_score_codex":0.00002022456,"about_ca_system_score_gemma":0.00004534954,"threshold_uncertainty_score":0.99998575},"labels":[],"label_agreement":null},{"id":"W2145423957","doi":"10.1111/j.1574-6968.2011.02302.x","title":"spyder, a new method for in silico design and assessment of 16S rRNA gene primers for molecular microbial ecology","year":2011,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Gut microbiota and health","field":"Biochemistry, Genetics and Molecular Biology","cited_by":15,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Agriculture and Agri-Food Canada; University of Lethbridge","funders":"Agriculture and Agri-Food Canada","keywords":"In silico; 16S ribosomal RNA; Biology; Microbial ecology; Computational biology; Gene; Ribosomal RNA; Genetics; Ecology; Evolutionary biology; Microbiology; Bacteria","score_opus":0.028331347979735164,"score_gpt":0.315813311743853,"score_spread":0.28748196376411783,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2145423957","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.6786641,0.00031527787,0.31871888,0.0007201484,0.0002212798,0.0012611658,0.000080669226,0.000007180628,0.000011304607],"genre_scores_gemma":[0.19120638,0.000090547386,0.803279,0.004743084,0.00009591551,0.000115824434,0.00035165294,0.000049589675,0.000068046626],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9981477,0.00021545785,0.00044473849,0.0006201505,0.000018587909,0.0005533331],"domain_scores_gemma":[0.9992749,0.00007816023,0.00021556538,0.00028145043,0.000057867757,0.00009201725],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0005545015,0.0002616199,0.00044974266,0.00014044206,0.000058181,0.0000060772513,0.00023454479,0.00038160942,0.000010161724],"category_scores_gemma":[0.00003825941,0.00026827282,0.00014833709,0.000068547924,0.0001721969,0.0000041727,0.000096275675,0.00013281254,9.23825e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00037230775,0.00009725006,0.0010337246,0.00005944841,0.00013227262,0.0000030483657,0.00014184779,0.00004381453,0.9912679,0.00007806113,0.0059801377,0.00079013826],"study_design_scores_gemma":[0.0032457402,0.0009981031,0.0050713234,0.000014068128,0.00006354059,0.00009016799,0.00002601168,0.000043190164,0.9807822,0.00007803091,0.009282857,0.00030474723],"about_ca_topic_score_codex":0.00013888245,"about_ca_topic_score_gemma":0.00008678783,"teacher_disagreement_score":0.4874577,"about_ca_system_score_codex":0.00004153211,"about_ca_system_score_gemma":0.0002991997,"threshold_uncertainty_score":0.99997693},"labels":[],"label_agreement":null},{"id":"W2145982040","doi":"10.1016/s0378-1097(02)00735-8","title":"Role of the Pseudomonas aeruginosa las and rhl quorum-sensing systems in rhlI regulation","year":2002,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Bacterial Genetics and Biotechnology","field":"Biochemistry, Genetics and Molecular Biology","cited_by":96,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba","funders":"National Institute of Allergy and Infectious Diseases; Federation of European Microbiological Societies; National Institute for Health and Care Research; National Institutes of Health; Cystic Fibrosis Foundation","keywords":"Quorum sensing; Pseudomonas aeruginosa; Biology; Population; Regulator; Regulation of gene expression; Gene; Microbiology; Virulence; Genetics; Bacteria; Medicine","score_opus":0.0049993350585277934,"score_gpt":0.1711230056692629,"score_spread":0.1661236706107351,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2145982040","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99587226,0.00176346,0.000023470166,0.0017238938,0.00032557992,0.00019029995,0.000019386354,0.0000075862913,0.0000740634],"genre_scores_gemma":[0.99901545,0.0001451926,0.00019099127,0.00043922424,0.00009945072,0.0000029487137,0.00002943524,0.0000123686905,0.00006494524],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99909985,0.00010561674,0.00024426737,0.00029081834,0.00002551497,0.00023391674],"domain_scores_gemma":[0.9995106,0.000010486894,0.00012792918,0.00030752452,0.000023718248,0.000019745861],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00010479524,0.00013606882,0.00017553913,0.00005892826,0.00004987436,0.0000105280515,0.00015730479,0.00032937623,0.00000598851],"category_scores_gemma":[0.000020423598,0.00010772576,0.00004906107,0.00009366034,0.00030707745,0.0000019783524,0.00014402531,0.000118455064,0.0000037605091],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000014973375,0.000014808477,0.0029565303,0.0000075100957,0.000020080912,7.819783e-7,0.00004358377,0.000044396176,0.99467534,0.0000394974,0.00088382926,0.0012986432],"study_design_scores_gemma":[0.0005533267,0.000097066026,0.013749027,0.00003489992,0.00001361182,0.00014942288,0.00006305815,0.00017376106,0.94787174,0.000023918863,0.0370682,0.00020197994],"about_ca_topic_score_codex":0.0000730714,"about_ca_topic_score_gemma":0.0000813492,"teacher_disagreement_score":0.04680364,"about_ca_system_score_codex":0.000012197442,"about_ca_system_score_gemma":0.000007294915,"threshold_uncertainty_score":0.4392929},"labels":[],"label_agreement":null},{"id":"W2147008159","doi":"10.1016/s0378-1097(03)00474-9","title":"BldD from<i>Streptomyces coelicolor</i>is a non-essential global regulator that binds its own promoter as a dimer","year":2003,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Microbial Natural Products and Biosynthesis","field":"Medicine","cited_by":31,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Streptomyces coelicolor; Tetramer; Dimer; Regulator; Gene; Genetics; Biology; Streptomyces; Chemistry; Biochemistry; Bacteria; Enzyme","score_opus":0.009649247437377738,"score_gpt":0.2383222401683189,"score_spread":0.22867299273094116,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2147008159","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9700164,0.0006280709,0.000009057659,0.02653633,0.0011896263,0.00077812845,0.00028876672,0.00010039301,0.00045319987],"genre_scores_gemma":[0.96988785,0.000037341593,0.0006337857,0.027368383,0.00049499865,0.0000067169944,0.00022370623,0.00003882186,0.0013084009],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99754685,0.00014687396,0.00041118998,0.0010164774,0.00012485658,0.00075372227],"domain_scores_gemma":[0.9988483,0.00005050046,0.00022133607,0.00058494875,0.00009991561,0.00019496056],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.0001950496,0.00048441818,0.00068623683,0.000108417116,0.00016732002,0.000053929754,0.00027036888,0.000494175,0.0025517852],"category_scores_gemma":[0.000099505196,0.0003559938,0.00029607335,0.00030534662,0.00036384843,0.000113920614,0.000103733626,0.00040002388,0.00104972],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00028478837,0.00013764045,0.0042669107,0.00002925619,0.0003604009,0.000090172216,0.00015359797,1.6015716e-7,0.872891,0.000011330809,0.121398,0.00037673203],"study_design_scores_gemma":[0.0015560397,0.00020624652,0.002664268,0.000109652865,0.00025467874,0.0005058932,0.00003266258,0.000001914241,0.8758187,0.000018383136,0.118411064,0.00042049415],"about_ca_topic_score_codex":0.00017085689,"about_ca_topic_score_gemma":0.000016890872,"teacher_disagreement_score":0.0029869366,"about_ca_system_score_codex":0.00013582491,"about_ca_system_score_gemma":0.00012331274,"threshold_uncertainty_score":0.9998892},"labels":[],"label_agreement":null},{"id":"W2148454764","doi":"10.1111/j.1574-6968.2000.tb09218.x","title":"Genes controlling circadian rhythm are widely distributed in cyanobacteria","year":2000,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Photosynthetic Processes and Mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":39,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"TerraBioGen (Canada)","funders":"","keywords":"Cyanobacteria; Circadian rhythm; Synechococcus; Biology; Gene; Circadian clock; Gene cluster; Genetics; Bacteria; Neuroscience","score_opus":0.005343499465249553,"score_gpt":0.19744906595893025,"score_spread":0.19210556649368069,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2148454764","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9959588,0.00042803562,0.0015329018,0.0013059503,0.00022705666,0.0002014084,0.0002489221,0.000022944832,0.00007398897],"genre_scores_gemma":[0.99392295,0.00025970562,0.00020519555,0.0045199036,0.00017459475,0.000036809834,0.00075816433,0.00002631891,0.000096350705],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99865776,0.00007244319,0.00027125655,0.00047676952,0.000027961365,0.00049381674],"domain_scores_gemma":[0.99950546,0.000011702675,0.00009092799,0.00028993716,0.000024965642,0.000076987555],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012913051,0.00022494346,0.00027149305,0.00005078503,0.000071020746,0.00002110411,0.0002248637,0.0002408324,0.00015715531],"category_scores_gemma":[0.0000213799,0.0002209481,0.00009489108,0.00009124694,0.000109194276,0.000004751991,0.000042129144,0.00012752782,0.00006203341],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001182237,0.0000326732,0.00072856835,0.000007788167,0.00003587455,0.00003394789,0.0000250129,0.00012798276,0.9971043,0.000006684336,0.0003771417,0.0014017901],"study_design_scores_gemma":[0.0010881478,0.000075200805,0.0009071074,0.000031299358,0.0000134126885,0.0002343132,0.00003171081,0.000022552982,0.90047973,0.000024595742,0.09677408,0.00031784188],"about_ca_topic_score_codex":0.000047054495,"about_ca_topic_score_gemma":0.00011974657,"teacher_disagreement_score":0.096624576,"about_ca_system_score_codex":0.000026649317,"about_ca_system_score_gemma":0.000037115333,"threshold_uncertainty_score":0.9010002},"labels":[],"label_agreement":null},{"id":"W2148795721","doi":"10.1016/j.femsle.2005.08.011","title":"Isolation and characterization of bacteriophages of the<i>Burkholderia cepacia</i>complex","year":2005,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Bacteriophages and microbial interactions","field":"Environmental Science","cited_by":65,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"Natural Sciences and Engineering Research Council of Canada; Directorate for Biological Sciences; University of Alberta","keywords":"Lytic cycle; Burkholderia; Bacteriophage; Lysogenic cycle; Biology; Microbiology; Burkholderia cepacia complex; Isolation (microbiology); Myoviridae; Lysis; Bacteria; Virology; Genetics; Escherichia coli; Virus; Molecular biology; Gene","score_opus":0.007446156778489743,"score_gpt":0.2008035001456916,"score_spread":0.19335734336720184,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2148795721","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99713284,0.000006403742,0.00023653875,0.0020778906,0.00019058598,0.00014434752,0.000073513605,0.0000102024,0.00012768865],"genre_scores_gemma":[0.99780357,0.000012711938,0.0007282193,0.0011868395,0.00004207989,0.0000032303724,0.000053562,0.000008518308,0.00016124241],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99935895,0.000056731486,0.0002503415,0.00017140075,0.00002457716,0.00013798098],"domain_scores_gemma":[0.9995632,0.000016125965,0.00022385694,0.0001690329,0.000007506316,0.000020256992],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00006163237,0.00010323,0.00014981143,0.000027362095,0.000067711,0.000007854986,0.00013246358,0.00006290087,0.0008512238],"category_scores_gemma":[0.000005262467,0.00008182968,0.000056776975,0.000093177936,0.0003306342,0.00016529384,0.00012362147,0.00007622645,0.00003112022],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000011498675,0.000026197531,0.0046258033,0.0000050331155,0.000010804562,1.2179022e-7,0.00028636598,0.000010470084,0.9932836,0.000004497477,0.00043523242,0.0013003564],"study_design_scores_gemma":[0.00013698026,0.000015989504,0.515449,0.0000101263995,0.000010553015,0.000023248362,0.000007797165,0.000017946355,0.47107184,9.372781e-7,0.013192152,0.000063452375],"about_ca_topic_score_codex":0.00007641305,"about_ca_topic_score_gemma":0.00005043692,"teacher_disagreement_score":0.5222118,"about_ca_system_score_codex":0.000034586905,"about_ca_system_score_gemma":0.000003122785,"threshold_uncertainty_score":0.93203044},"labels":[],"label_agreement":null},{"id":"W2150255449","doi":"10.1016/j.femsle.2004.06.020","title":"Multigene phylogenies of Ophiostoma clavigerum and closely related species from bark beetle-attacked Pinus in North America","year":2004,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Forest Insect Ecology and Management","field":"Environmental Science","cited_by":33,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Ophiostoma; Biology; Bark beetle; Phylogenetic tree; Botany; Clade; Phylogenetics; Gene; Paraphyly; Evolutionary biology; Genetics; Fungus; Curculionidae","score_opus":0.005126142257113181,"score_gpt":0.18235353022144948,"score_spread":0.1772273879643363,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2150255449","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9981573,0.00014337778,0.00002337381,0.0008991365,0.00022065891,0.00026110114,0.00006736141,0.000027561946,0.00020008316],"genre_scores_gemma":[0.9954098,0.00008419026,0.0011934334,0.0030603388,0.000015087095,0.000014182848,0.00011822005,0.000012588841,0.00009218963],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99880564,0.00007907479,0.00031724642,0.0004078423,0.000040995787,0.0003492091],"domain_scores_gemma":[0.99953306,0.0000592269,0.00013972021,0.00022172347,0.000003462886,0.000042799868],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00007182201,0.00018611454,0.00028543634,0.00008329051,0.00007826659,0.000005291116,0.00023197426,0.0001324122,0.00041233914],"category_scores_gemma":[0.000017425811,0.00017861805,0.000053103697,0.00024103984,0.0011779952,0.000069774884,0.0002281683,0.000188722,0.00024104581],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000055944838,0.00008391267,0.09954782,0.0000041895696,0.000051904128,0.000064883134,0.0011949181,0.0020838745,0.89467174,0.000010774792,0.0019813576,0.00024867905],"study_design_scores_gemma":[0.0010570872,0.00013115632,0.9846864,0.000009721634,0.000016854225,0.00001529863,0.00010374919,0.000006040466,0.008986005,0.00012520244,0.0046597007,0.00020279414],"about_ca_topic_score_codex":0.001045721,"about_ca_topic_score_gemma":0.0038460307,"teacher_disagreement_score":0.88568574,"about_ca_system_score_codex":0.0001204145,"about_ca_system_score_gemma":0.000006600231,"threshold_uncertainty_score":0.72838324},"labels":[],"label_agreement":null},{"id":"W2150588161","doi":"10.1111/j.1574-6968.2010.02086.x","title":"Cell surface characteristics of nontypeable isolates of Streptococcus suis","year":2010,"lang":"fr","type":"article","venue":"FEMS Microbiology Letters","topic":"Streptococcal Infections and Treatments","field":"Medicine","cited_by":48,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Fonds de Recherche du Québec - Santé; Université Laval","funders":"Natural Sciences and Engineering Research Council of Canada; Fonds Québécois de la Recherche sur la Nature et les Technologies; Johns Hopkins University","keywords":"Serotype; Streptococcus suis; Microbiology; Biology; Biofilm; Virology; Streptococcaceae; Bacteria; Virulence; Gene; Antibiotics","score_opus":0.007665213460061254,"score_gpt":0.2364825971054204,"score_spread":0.22881738364535917,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2150588161","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9907155,0.0012635386,0.00008309145,0.0010955975,0.004749044,0.00061703584,0.00076482736,0.000024382829,0.0006869609],"genre_scores_gemma":[0.99502456,0.00013893413,0.0011213337,0.00027142136,0.00029440678,0.0000111714435,0.0002517539,0.000036060854,0.002850338],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9983114,0.000085773485,0.00065047696,0.00036771415,0.00003996242,0.00054469175],"domain_scores_gemma":[0.9985014,0.00023916666,0.0004529041,0.00052210945,0.00016113605,0.00012325976],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00016783027,0.00031208838,0.00073330983,0.00011135225,0.000063782136,0.0000075660955,0.00015436164,0.00043325638,0.0020704602],"category_scores_gemma":[0.000054755932,0.0002904139,0.00024068347,0.00020600215,0.0007957802,0.000057067326,0.00007607016,0.00052880705,0.0003124754],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00004571729,0.0005229577,0.39328745,0.0001502183,0.00023217702,0.000017891103,0.00010611402,0.0000071178088,0.60102075,0.00003537632,0.003988915,0.00058528956],"study_design_scores_gemma":[0.0026292994,0.00083533337,0.14979099,0.00029350183,0.0005898437,0.00010574105,0.00007276124,0.00004104038,0.8186453,0.000009256045,0.02665102,0.00033590995],"about_ca_topic_score_codex":0.0010207475,"about_ca_topic_score_gemma":0.00004615916,"teacher_disagreement_score":0.24349646,"about_ca_system_score_codex":0.000054464686,"about_ca_system_score_gemma":0.000100361,"threshold_uncertainty_score":0.9999548},"labels":[],"label_agreement":null},{"id":"W2151091336","doi":"10.1111/j.1574-6968.2002.tb11051.x","title":"Diversity and phylogenetic analysis of bacteria in the mucosa of chicken ceca and comparison with bacteria in the cecal lumen","year":2002,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Gut microbiota and health","field":"Biochemistry, Genetics and Molecular Biology","cited_by":252,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph; Agriculture and Agri-Food Canada","funders":"","keywords":"Biology; Bacteria; Microbiology; 16S ribosomal RNA; Phylogenetic tree; Ribosomal RNA; Intestinal mucosa; Terminal restriction fragment length polymorphism; Population; Restriction fragment length polymorphism; Genetics; Polymerase chain reaction; Gene","score_opus":0.012973897450636186,"score_gpt":0.21887362571473926,"score_spread":0.20589972826410308,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2151091336","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99813503,0.00037133566,0.00001153213,0.0011961901,0.000021735981,0.00019042233,0.000057873985,0.0000012132757,0.000014673189],"genre_scores_gemma":[0.9984183,0.00015395111,0.000118733544,0.0011692541,0.000015785918,0.0000036658096,0.00011155707,0.000004760515,0.000003993337],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99897707,0.0002891977,0.00023421142,0.0002598512,0.00002946667,0.00021023568],"domain_scores_gemma":[0.9995526,0.000036357305,0.00012871363,0.0002479764,0.000014697651,0.00001961987],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00026675878,0.00013210581,0.00031382765,0.00011379123,0.000112326,0.0000059350627,0.00023320373,0.00011915421,0.00001468509],"category_scores_gemma":[0.000005981593,0.00008305677,0.00004419545,0.00021377749,0.0003610576,0.000002873815,0.00022118448,0.00012285441,3.6366043e-7],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000045160374,0.000049789614,0.36948124,0.000012480711,0.000087262044,0.0000016511619,0.0025921997,0.0000065162694,0.6274716,0.000002000013,0.0002041105,0.000045947458],"study_design_scores_gemma":[0.0006861693,0.00023850023,0.988818,0.000010332765,0.00012922658,0.000029004683,0.00040046292,0.000022728846,0.008738626,0.0000010110654,0.0008176405,0.00010833388],"about_ca_topic_score_codex":0.00032574494,"about_ca_topic_score_gemma":0.001600669,"teacher_disagreement_score":0.6193367,"about_ca_system_score_codex":0.000007177396,"about_ca_system_score_gemma":0.000006945545,"threshold_uncertainty_score":0.33869568},"labels":[],"label_agreement":null},{"id":"W2151779964","doi":"10.1016/j.femsle.2004.03.043","title":"An ffh mutant of Streptococcus mutans is viable and able to physiologically adapt to low pH in continuous culture","year":2004,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Genomics and Phylogenetic Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":31,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institute of Dental and Craniofacial Research; Université Laval","keywords":"Mutant; Operon; Chemostat; Biology; Streptococcus mutans; Biochemistry; Microbiology; Streptococcaceae; Bacteria; Wild type; Gene; Genetics","score_opus":0.0045714504418530345,"score_gpt":0.21211812215520567,"score_spread":0.20754667171335264,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2151779964","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99734324,0.000342797,0.00021998241,0.0013078937,0.0000735757,0.00045476187,0.00018915368,0.000004630879,0.000063981184],"genre_scores_gemma":[0.9891066,0.00006866445,0.0019301008,0.008670698,0.000075688215,0.000039535757,0.000059633265,0.000015445887,0.000033627013],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9987502,0.00004146267,0.00025583294,0.00054677326,0.000027593978,0.00037814898],"domain_scores_gemma":[0.9994556,0.0000071830104,0.00006913572,0.00030800642,0.000063011714,0.00009706911],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0000903847,0.00021924793,0.00034290444,0.000054976055,0.000053321677,0.000010762811,0.00023294888,0.0001766725,0.000009114137],"category_scores_gemma":[0.00002120794,0.00018743196,0.00005259877,0.00012181465,0.00012982244,0.0000012924949,0.00014959095,0.00008805245,0.0000082745],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009753386,0.00008594492,0.0023869136,0.000009353001,0.000056763234,0.0000069922257,0.0005938916,0.0014781534,0.9935592,0.000015899755,0.001490601,0.00021878745],"study_design_scores_gemma":[0.0009166753,0.0012778147,0.009634284,0.000030346851,0.000014521983,0.000019075416,0.0003138371,0.0000018914066,0.9712371,0.000050235256,0.01618485,0.000319362],"about_ca_topic_score_codex":0.00013245641,"about_ca_topic_score_gemma":0.00013293525,"teacher_disagreement_score":0.02232206,"about_ca_system_score_codex":0.00001794687,"about_ca_system_score_gemma":0.00003057354,"threshold_uncertainty_score":0.7643254},"labels":[],"label_agreement":null},{"id":"W2152092848","doi":"10.1016/s0378-1097(03)00430-0","title":"F factor conjugation is a true type IV secretion system","year":2003,"lang":"en","type":"review","venue":"FEMS Microbiology Letters","topic":"Escherichia coli research studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":425,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"Bacterial conjugation; Pilus; Plasmid; Secretion; Gene; Escherichia coli; Pilin; Biology; Genetics; Chemistry; Biochemistry","score_opus":0.030742268367024095,"score_gpt":0.3051825282156604,"score_spread":0.2744402598486363,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2152092848","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0044415435,0.9928429,0.00013168233,0.000117126154,0.0009123973,0.0009293772,0.00033418328,0.000037958554,0.0002528336],"genre_scores_gemma":[0.0003854099,0.99495995,0.00017060267,0.0010832084,0.00038893658,0.00013832768,0.0021040055,0.000079605095,0.0006899316],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9976035,0.00056758354,0.00047070486,0.0007719203,0.00006908951,0.000517254],"domain_scores_gemma":[0.998874,0.000042467185,0.00033074387,0.000554575,0.000120221586,0.000077984296],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00021017823,0.0005120304,0.0009963791,0.00012359617,0.00013526014,0.00003064367,0.0003529986,0.0007585605,0.000043323067],"category_scores_gemma":[0.000083589715,0.00043340342,0.00037137064,0.00021307121,0.00022201728,0.000003118791,0.00017229233,0.00039090333,0.00023480078],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000058972586,0.000057704416,0.00006982801,0.010095155,0.001988242,0.000030582287,0.00009396822,9.281209e-7,0.8291034,0.000049771934,0.10976298,0.04868843],"study_design_scores_gemma":[0.00020804074,0.00015504233,0.0000036841054,0.0008254972,0.00014686405,0.00012421724,0.000015888096,0.0000011516905,0.00031533267,3.091928e-7,0.9977886,0.0004153763],"about_ca_topic_score_codex":0.000010888899,"about_ca_topic_score_gemma":0.0000061977444,"teacher_disagreement_score":0.88802564,"about_ca_system_score_codex":0.00016322128,"about_ca_system_score_gemma":0.00021652883,"threshold_uncertainty_score":0.99981177},"labels":[],"label_agreement":null},{"id":"W2152548385","doi":"10.1016/j.femsle.2005.06.050","title":"Diverse pathogenicity of<i>Burkholderia cepacia</i>complex strains in the<i>Caenorhabditis elegans</i>host model","year":2005,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Cystic Fibrosis Research Advances","field":"Medicine","cited_by":56,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Western University","funders":"Canadian Institutes of Health Research","keywords":"Biology; Caenorhabditis elegans; Burkholderia; Pathogenicity; Phenotype; Microbiology; Burkholderia cepacia complex; Caenorhabditis; Strain (injury); Genetics; Host (biology); Bacteria; Gene","score_opus":0.027574559177446094,"score_gpt":0.28571190879339603,"score_spread":0.2581373496159499,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2152548385","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9879515,0.00019434029,0.0010781258,0.00913337,0.000083383944,0.00061660697,0.00055214466,0.000038206934,0.00035230088],"genre_scores_gemma":[0.98342526,0.00004704332,0.0076855454,0.008287585,0.00017785087,0.000029680994,0.0002519981,0.000023979059,0.00007103723],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9981138,0.00017984872,0.0004550471,0.00042851284,0.00016107746,0.00066171185],"domain_scores_gemma":[0.99906224,0.00015094258,0.0001292053,0.0005016641,0.00006126541,0.00009468675],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00039551483,0.00024908085,0.00048196857,0.00019816008,0.000087014756,0.000014149922,0.00039761188,0.00013161117,0.00017467856],"category_scores_gemma":[0.00012200428,0.00019297645,0.00017718093,0.0002855247,0.000651941,0.00012212098,0.000103111066,0.00046080348,0.00006085264],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013467931,0.00018082725,0.0022714867,0.00003763075,0.000044172495,0.000072392104,0.0008107209,0.00049314316,0.98059815,0.00006438684,0.014301606,0.0009908048],"study_design_scores_gemma":[0.021422904,0.002125822,0.35214984,0.00064200803,0.0004601054,0.003273942,0.004090097,0.007604055,0.44000906,0.00025484338,0.16560969,0.002357646],"about_ca_topic_score_codex":0.00013660433,"about_ca_topic_score_gemma":0.00038187945,"teacher_disagreement_score":0.5405891,"about_ca_system_score_codex":0.00012998347,"about_ca_system_score_gemma":0.00008865695,"threshold_uncertainty_score":0.78693515},"labels":[],"label_agreement":null},{"id":"W2153536272","doi":"10.1111/j.1574-6968.1997.tb12788.x","title":"The glycopeptide antibiotic producer Streptomyces toyocaensis NRRL 15009 has both d-alanyl-d-alanine and d-alanyl-d-lactate ligases","year":2006,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Carbohydrate Chemistry and Synthesis","field":"Chemistry","cited_by":24,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"Medical Research Council; Natural Sciences and Engineering Research Council of Canada; Medical Research Council Canada","keywords":"Glycopeptide; Peptidoglycan; Glycopeptide antibiotic; Biochemistry; Antibiotics; Depsipeptide; Biology; Enzyme; Streptomyces; DNA ligase; Dipeptidase; Vancomycin; Microbiology; Bacteria; Genetics; Staphylococcus aureus","score_opus":0.0074114862190196576,"score_gpt":0.18614442184189076,"score_spread":0.1787329356228711,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2153536272","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9877588,0.0009949902,0.0000030004223,0.008451028,0.00022802597,0.00014511259,0.00019707758,0.00019409077,0.0020278308],"genre_scores_gemma":[0.99416167,0.0001550948,0.00013167312,0.00087485305,0.00066124374,0.00001648138,0.00036001753,0.000060075457,0.0035788878],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99751806,0.000076024146,0.0005682188,0.0008897711,0.00010422958,0.0008436922],"domain_scores_gemma":[0.9983361,0.00046542461,0.00028723906,0.00074461335,0.00005847047,0.000108158616],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00023597981,0.0005307593,0.00051520293,0.000059285605,0.0006026993,0.00023775677,0.00044003277,0.00027987116,0.00022705703],"category_scores_gemma":[0.00011774734,0.000394151,0.00018104436,0.00016249562,0.0010189784,0.0001037694,0.00016459097,0.00040725744,0.00007905685],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000085615924,0.00006781156,0.015626356,0.00007310892,0.00014586844,0.00007630275,0.000105086605,0.000017970504,0.9454471,0.0000078197145,0.03766275,0.00068422325],"study_design_scores_gemma":[0.00065004476,0.000021661537,0.0024955398,0.000100421326,0.000105986444,0.00033221842,0.00016944016,0.000016007367,0.9339611,0.000018347288,0.0615982,0.0005310518],"about_ca_topic_score_codex":0.0003828937,"about_ca_topic_score_gemma":0.0001573213,"teacher_disagreement_score":0.02393545,"about_ca_system_score_codex":0.00008782405,"about_ca_system_score_gemma":0.000050560782,"threshold_uncertainty_score":0.99985105},"labels":[],"label_agreement":null},{"id":"W2154333277","doi":"10.1111/j.1574-6968.2009.01786.x","title":"Analysis of a collagen-binding trimeric autotransporter adhesin from<i>Mannheimia haemolytica</i>A1","year":2009,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Bacteriophages and microbial interactions","field":"Environmental Science","cited_by":13,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Bacterial adhesin; Bacterial outer membrane; Biology; Microbiology; Peptide sequence; Amino acid; Molecular biology; Antibody; Trypsin; Biochemistry; Escherichia coli; Gene; Genetics; Enzyme","score_opus":0.008134898650411252,"score_gpt":0.2216084923854621,"score_spread":0.21347359373505084,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2154333277","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9966065,0.000032510987,0.00055754185,0.0016812958,0.000239221,0.00015774593,0.00020906064,0.00004381553,0.00047225822],"genre_scores_gemma":[0.9935905,0.000010075347,0.0011605127,0.004440042,0.000032974316,0.0000040890013,0.0003619164,0.0000119745255,0.00038793197],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9986476,0.00006812641,0.00041312288,0.0004516111,0.000047278812,0.00037228042],"domain_scores_gemma":[0.9993315,0.000056283196,0.0002000852,0.0003333233,0.0000072935904,0.000071557246],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.000094678835,0.00021391215,0.00046029966,0.00017532473,0.000099442,0.000022280674,0.00029049994,0.00013286351,0.0040506367],"category_scores_gemma":[0.000006496367,0.00020212519,0.00030997052,0.0007089962,0.00024955653,0.00012722239,0.000042045463,0.00013218768,0.00039298518],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00003930091,0.00008375949,0.0053674714,7.9406175e-7,0.00036695082,0.000020923137,0.0003374271,0.00025235623,0.9863242,0.0000017025894,0.0061264364,0.0010786662],"study_design_scores_gemma":[0.00086440233,0.0001854082,0.6984386,0.000029000797,0.0019448597,0.00004128362,0.00007676289,0.0002192062,0.26202035,0.00000715307,0.035525084,0.00064793375],"about_ca_topic_score_codex":0.00083384576,"about_ca_topic_score_gemma":0.00018257997,"teacher_disagreement_score":0.7243039,"about_ca_system_score_codex":0.00012170299,"about_ca_system_score_gemma":0.000008525327,"threshold_uncertainty_score":0.9968598},"labels":[],"label_agreement":null},{"id":"W2156473421","doi":"10.1016/s0378-1097(03)00577-9","title":"The XerC recombinase of<i>Proteus mirabilis</i>: characterization and interaction with other tyrosine recombinases","year":2003,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Bacterial Genetics and Biotechnology","field":"Biochemistry, Genetics and Molecular Biology","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal","funders":"H2020 European Research Council; Natural Sciences and Engineering Research Council of Canada","keywords":"Recombinase; Proteus mirabilis; Biology; Site-specific recombination; Genetics; Escherichia coli; Gene; Recombination","score_opus":0.005303824013280907,"score_gpt":0.19239847771224078,"score_spread":0.18709465369895986,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2156473421","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99715805,0.00020147777,0.00041681615,0.0014931305,0.00040693328,0.0002503944,0.000029145718,0.00001053495,0.000033496628],"genre_scores_gemma":[0.9978969,0.00031703003,0.0005738966,0.00079407456,0.000046804562,0.000025436642,0.00016087676,0.000022702076,0.00016225853],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9991473,0.00012573766,0.0002039762,0.00029586724,0.000020338153,0.00020679149],"domain_scores_gemma":[0.99945855,0.000020413117,0.00016282153,0.00028250748,0.000049288807,0.000026440674],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015691337,0.00015288718,0.00014883475,0.000037403457,0.000104978666,0.000019240468,0.00011497614,0.00019129722,0.000010053366],"category_scores_gemma":[0.00004751177,0.00010449143,0.00003631771,0.000072308176,0.00035302227,0.0000039875877,0.00004422006,0.000102048434,0.0000027894005],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00016893775,0.00003877076,0.001695005,0.000006890943,0.000045570087,6.7537917e-7,0.000015350814,7.6716896e-7,0.99535185,0.000091308495,0.00030196158,0.002282925],"study_design_scores_gemma":[0.00045753704,0.00041936082,0.0014974879,0.000014181504,0.000013606591,0.00010337966,0.000024285971,6.616945e-7,0.81512517,0.000010739353,0.18220581,0.00012775583],"about_ca_topic_score_codex":0.00001734649,"about_ca_topic_score_gemma":0.00004184913,"teacher_disagreement_score":0.18190385,"about_ca_system_score_codex":0.000008253478,"about_ca_system_score_gemma":0.000020684354,"threshold_uncertainty_score":0.42610368},"labels":[],"label_agreement":null},{"id":"W2157273202","doi":"10.1016/j.femsle.2004.08.043","title":"Occurrence of d-histidine residues in antimicrobial poly(arginylâhistidine), conferring resistance to enzymatic hydrolysis","year":2004,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Biopolymer Synthesis and Applications","field":"Biochemistry, Genetics and Molecular Biology","cited_by":17,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute for Biological Sciences","funders":"","keywords":"Histidine; Peptide; Biochemistry; Chemistry; Antimicrobial; Hydrolysate; Hydrolysis; Enzyme; Organic chemistry","score_opus":0.00791542089384232,"score_gpt":0.22482313941683038,"score_spread":0.21690771852298807,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2157273202","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99202305,0.0008129273,0.0020584704,0.00431021,0.00011141129,0.00023013071,0.0003190168,0.000015085112,0.000119710894],"genre_scores_gemma":[0.9952365,0.000047639118,0.0025046475,0.0017808181,0.00006595545,0.000038870963,0.0002559242,0.000013244004,0.000056401786],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99863416,0.000056228502,0.0004219903,0.0004962771,0.000041331834,0.00034999967],"domain_scores_gemma":[0.9992794,0.000020778914,0.0001476014,0.00045317117,0.000034576635,0.00006447656],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015434081,0.00021093604,0.00031263888,0.00014532963,0.000067710294,0.000009778619,0.00035647192,0.00014681819,0.000013860505],"category_scores_gemma":[0.0000572718,0.0002172851,0.00009705277,0.00022851246,0.0002426284,0.0000042255742,0.00010978762,0.00010974488,0.000026120164],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007022839,0.00007358938,0.0015431171,0.000023365605,0.00003104947,0.0000035106646,0.000088472116,0.0000899731,0.993044,0.0001055788,0.0048249415,0.00010213393],"study_design_scores_gemma":[0.0004884567,0.000043331253,0.0012392917,0.00007749426,0.000016341985,0.000014814007,0.000018643957,4.6671815e-7,0.9875492,0.000009505761,0.010301316,0.00024112753],"about_ca_topic_score_codex":0.000117816926,"about_ca_topic_score_gemma":0.00040186904,"teacher_disagreement_score":0.00549483,"about_ca_system_score_codex":0.000040381226,"about_ca_system_score_gemma":0.00006052748,"threshold_uncertainty_score":0.8860629},"labels":[],"label_agreement":null},{"id":"W2158487979","doi":"10.1111/j.1574-6968.2000.tb09028.x","title":"Genetic analysis of SecAâSecY interaction required for spore development in<i>Bacillus subtilis</i>","year":2000,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Legume Nitrogen Fixing Symbiosis","field":"Agricultural and Biological Sciences","cited_by":9,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Saint Paul University","funders":"Japan Society for the Promotion of Science","keywords":"Bacillus subtilis; Translocase; Mutant; Biology; Gene; Response regulator; Histidine kinase; Transcription (linguistics); Suppressor; Genetics; Cell biology; Spore; Regulator; Microbiology; Bacteria","score_opus":0.013461217494773135,"score_gpt":0.2107000216444187,"score_spread":0.19723880414964556,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2158487979","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9984395,0.000065536704,0.0000043191767,0.000980747,0.00010836766,0.0002406785,0.000090660855,0.000028300079,0.00004187274],"genre_scores_gemma":[0.99742687,0.0000059941945,0.00065028545,0.001221089,0.000054036354,0.000033976597,0.00051669206,0.0000015719011,0.000089486115],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9988044,0.00007212566,0.0003833418,0.0003699803,0.000043285636,0.00032685706],"domain_scores_gemma":[0.9995858,0.00013347059,0.0001304625,0.0000768676,0.000036283007,0.000037091002],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001665282,0.0001576177,0.00034296818,0.00008018308,0.00006792578,0.000011401264,0.00023335998,0.00013148412,0.0006827837],"category_scores_gemma":[0.000013803284,0.00007650888,0.00018832326,0.00064432574,0.00008377795,0.00005917625,0.000026417658,0.00008510402,0.000029472882],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007414008,0.000048794842,0.030636245,0.000004201037,0.00020043695,0.0000027068336,0.00021153185,0.000026858634,0.9495077,0.0000011581291,0.00051085145,0.01877537],"study_design_scores_gemma":[0.00059407315,0.00016664749,0.6401962,0.0000334277,0.0002787506,0.000020922853,0.00012915359,0.00005365108,0.32046768,0.000010117201,0.03756732,0.00048202628],"about_ca_topic_score_codex":0.00020131127,"about_ca_topic_score_gemma":0.0012499259,"teacher_disagreement_score":0.62904,"about_ca_system_score_codex":0.000079410114,"about_ca_system_score_gemma":0.000008087487,"threshold_uncertainty_score":0.7476003},"labels":[],"label_agreement":null},{"id":"W2158932650","doi":"10.1111/j.1574-6968.2000.tb09191.x","title":"Development of a competitive polymerase chain reaction assay for the ruminal bacterium<i>Butyrivibrio fibrisolvens</i>OB156 and its use for tracking an OB156-derived recombinant","year":2000,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Microbial infections and disease research","field":"Immunology and Microbiology","cited_by":27,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Agriculture and Agri-Food Canada","funders":"","keywords":"Recombinant DNA; Polymerase chain reaction; Bacteria; Molecular biology; Primer (cosmetics); Biology; DNA; Rumen; Polymerase; Microbiology; Biochemistry; Chemistry; Gene; Genetics","score_opus":0.032539134830453585,"score_gpt":0.26814306393966153,"score_spread":0.23560392910920794,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2158932650","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9941861,0.000646829,0.0017099028,0.0010107443,0.00048691742,0.0013301666,0.0005756773,0.000047031866,0.000006647148],"genre_scores_gemma":[0.9955247,0.00012693311,0.0015312562,0.00068045146,0.00007665852,0.00025011404,0.0014187981,0.000041951036,0.00034914198],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9979215,0.00033817283,0.0005518042,0.00053031306,0.000020486135,0.0006376729],"domain_scores_gemma":[0.99862814,0.0007010654,0.00020957184,0.00026290308,0.00014294869,0.000055390785],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00069908635,0.00029667196,0.00044103304,0.00015174331,0.00078418513,0.00004756688,0.00019652215,0.0002727619,0.00020386552],"category_scores_gemma":[0.00008584553,0.00023826989,0.00018754562,0.00010809775,0.0003655459,0.00021897185,0.000058476122,0.00025922657,0.000032572083],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0012126308,0.00020708099,0.0001074521,0.00004685725,0.00034183045,0.0000015788256,0.00088205194,0.0000043167925,0.9815719,0.00010923929,0.0009931142,0.01452191],"study_design_scores_gemma":[0.0035230513,0.0004036786,0.0043910826,0.000110410256,0.00014326049,0.00025219715,0.0004117514,0.000037650065,0.8441379,0.000008697234,0.14613438,0.00044590808],"about_ca_topic_score_codex":0.00011203389,"about_ca_topic_score_gemma":0.00018495574,"teacher_disagreement_score":0.14514126,"about_ca_system_score_codex":0.00007948288,"about_ca_system_score_gemma":0.00013204133,"threshold_uncertainty_score":0.9716364},"labels":[],"label_agreement":null},{"id":"W2159294745","doi":"10.1111/j.1574-6968.2000.tb09282.x","title":"Purification and characterization of a surface-binding protein from<i>Lactobacillus fermentum</i>RC-14 that inhibits adhesion of<i>Enterococcus faecalis</i>1131","year":2000,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Probiotics and Fermented Foods","field":"Agricultural and Biological Sciences","cited_by":186,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Health Sciences Centre; Western University","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Lactobacillus fermentum; Enterococcus faecalis; Adhesion; Microbiology; Chemistry; Enterococcus; Streptococcaceae; Lactobacillus; Bacteria; Biochemistry; Biology; Lactobacillus plantarum; Lactic acid; Escherichia coli; Organic chemistry; Antibiotics","score_opus":0.012828070922627603,"score_gpt":0.18352229525656752,"score_spread":0.1706942243339399,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2159294745","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9973434,0.000056749937,0.0000072867674,0.0013649298,0.000086432156,0.00048875046,0.0005920625,0.000028931776,0.000031458767],"genre_scores_gemma":[0.99795103,0.0000951659,0.000088841814,0.00031382154,0.00003943553,0.000009018712,0.0014025021,0.0000024353383,0.00009776962],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9988316,0.00012265044,0.00035571874,0.00036492362,0.00006745096,0.00025763895],"domain_scores_gemma":[0.99953115,0.000036021178,0.0002609755,0.00008559339,0.000033781325,0.00005248813],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014874667,0.00018666347,0.00028663728,0.00002167206,0.00009981816,0.000023231858,0.00017693448,0.00018126427,0.00020300022],"category_scores_gemma":[0.0000055247037,0.00009363085,0.000073884905,0.00015879162,0.00016574265,0.00011764037,0.000054421598,0.00012398153,0.000016526845],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000095593496,0.00007996183,0.007519579,0.000012130772,0.00002653717,9.2093205e-7,0.00011483328,9.412905e-7,0.98643637,0.0000054240063,0.000047811947,0.0056599043],"study_design_scores_gemma":[0.00035050616,0.00018558485,0.044080634,0.00010150663,0.000017499922,0.0000050405515,0.000029943407,0.000006941033,0.9528215,0.0000110981755,0.0022185536,0.00017120046],"about_ca_topic_score_codex":0.000082033024,"about_ca_topic_score_gemma":0.000018803581,"teacher_disagreement_score":0.036561057,"about_ca_system_score_codex":0.000025396937,"about_ca_system_score_gemma":0.000004510444,"threshold_uncertainty_score":0.38181552},"labels":[],"label_agreement":null},{"id":"W2160029206","doi":"10.1111/j.1574-6968.2007.00919.x","title":"Effects of DNA supercoiling and topoisomerases on the expression of genes coding for F165<sub>1</sub>, a P-like fimbriae","year":2007,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Genomics and Chromatin Dynamics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"DNA supercoil; Transcription (linguistics); DNA gyrase; Operon; Topoisomerase; Biology; Gene; Genetics; Intergenic region; Fimbria; DNA; Molecular biology; Regulatory sequence; Regulation of gene expression; Mutant; Escherichia coli; DNA replication; Genome","score_opus":0.004558709275566476,"score_gpt":0.19680087985213923,"score_spread":0.19224217057657275,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2160029206","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9972441,0.00057785294,0.0014828857,0.00017141576,0.00017946302,0.0002935161,0.00004216678,0.0000040425502,0.0000045453294],"genre_scores_gemma":[0.99827236,0.00018286987,0.00052546896,0.00084292487,0.000072157665,0.000012401452,0.00007065996,0.000016382286,0.0000047928434],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9992676,0.000042940374,0.00022574891,0.00023065068,0.000023424163,0.00020965857],"domain_scores_gemma":[0.9994173,0.0002201691,0.00012358947,0.00018147948,0.000032424672,0.000025030928],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00022427249,0.00013598149,0.00018128997,0.000041217692,0.00007203203,0.000004885979,0.00013143299,0.00013283904,6.682426e-7],"category_scores_gemma":[0.00005347223,0.000102891565,0.00008684079,0.00003107746,0.0001681933,0.0000017474903,0.000077270124,0.000055821605,3.7872007e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010242096,0.000029206652,0.0006909982,0.00008572929,0.000038708615,0.0000010699976,0.00007538199,0.000029183286,0.9979153,0.000027207638,0.00046963373,0.0005351386],"study_design_scores_gemma":[0.0004769797,0.00019439432,0.0010807426,0.00005285185,0.000019449582,0.000012090631,0.00006045845,0.000013639966,0.9974733,0.000009267748,0.00049650506,0.00011034633],"about_ca_topic_score_codex":0.000004437144,"about_ca_topic_score_gemma":0.000010730437,"teacher_disagreement_score":0.0010282303,"about_ca_system_score_codex":0.000007961432,"about_ca_system_score_gemma":0.000012078227,"threshold_uncertainty_score":0.41957963},"labels":[],"label_agreement":null},{"id":"W2161173836","doi":"10.1111/j.1574-6968.2001.tb10637.x","title":"PCR cloning of type II polyhydroxyalkanoate biosynthesis genes from two<i>Pseudomonas</i>strains","year":2001,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"biodegradable polymer synthesis and properties","field":"Materials Science","cited_by":29,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Natural Science Foundation of China; Public Health Agency of Canada","keywords":"ORFS; Polyhydroxyalkanoates; Cloning (programming); Pseudomonas; Biology; Gene; Open reading frame; Escherichia coli; Molecular cloning; Biochemistry; genomic DNA; Molecular biology; Genetics; Bacteria; Peptide sequence","score_opus":0.020890997949922788,"score_gpt":0.2171598490521341,"score_spread":0.19626885110221132,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2161173836","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98427075,0.0106952535,0.00009934449,0.0033103884,0.0009814213,0.0001021387,0.00018775655,0.00009794999,0.00025500706],"genre_scores_gemma":[0.99474096,0.00027688124,0.0023747135,0.0020497632,0.00025961717,0.000007196895,0.000046123034,0.000034807927,0.00020992405],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9981177,0.00022013417,0.0004786867,0.00052958156,0.00007977731,0.0005741085],"domain_scores_gemma":[0.9990153,0.00013611077,0.0002470112,0.00048238205,0.000042981806,0.000076222546],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00029383093,0.00030312917,0.0004972779,0.000119307006,0.0003003445,0.000035270037,0.00055947865,0.00016962521,0.0015990116],"category_scores_gemma":[0.000035452835,0.00024068738,0.00013927303,0.00018082505,0.00053382677,0.000121673904,0.00018620565,0.00013328617,0.00026529375],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011242647,0.000038668677,0.0019210562,0.000006838723,0.000059229318,0.000015183625,0.00036133468,0.000010299615,0.9899427,0.000017428365,0.0011114854,0.006403335],"study_design_scores_gemma":[0.00028478025,0.000073603944,0.00036014934,0.000052141273,0.000049569928,0.000053382326,0.000060096627,0.000019135028,0.98370534,0.000016717628,0.015021985,0.0003031071],"about_ca_topic_score_codex":0.0022864372,"about_ca_topic_score_gemma":0.00009278367,"teacher_disagreement_score":0.0139105,"about_ca_system_score_codex":0.000030898245,"about_ca_system_score_gemma":0.000042117124,"threshold_uncertainty_score":0.99931365},"labels":[],"label_agreement":null},{"id":"W2164551734","doi":"10.1111/1574-6968.12240","title":"An ABC pleiotropic drug resistance transporter of<i>Fusarium graminearum</i>with a role in crown and root diseases of wheat","year":2013,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Mycotoxins in Agriculture and Food","field":"Agricultural and Biological Sciences","cited_by":47,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Australian Research Council; University of Toronto; Grains Research and Development Corporation; Commonwealth Scientific and Industrial Research Organisation","keywords":"Biology; Fusarium; Virulence; Fungus; Pathogen; ATP-binding cassette transporter; Crown (dentistry); Microbiology; Pathogenic fungus; Root rot; Plant disease resistance; Transporter; Botany; Gene; Genetics; Medicine","score_opus":0.0025666896578511304,"score_gpt":0.1565301535012974,"score_spread":0.15396346384344628,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2164551734","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9971535,0.0005078391,0.0000022676177,0.0017912365,0.000035373552,0.00027473466,0.00017305535,0.00001715384,0.00004480379],"genre_scores_gemma":[0.99889815,0.000018947385,0.00011648773,0.00046373854,0.00005185935,0.000024903638,0.00035436722,0.0000013937808,0.00007016356],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.999021,0.00007973358,0.000262214,0.00030492764,0.00004726288,0.00028489667],"domain_scores_gemma":[0.9996791,0.00005422157,0.00008229678,0.00008481207,0.000037938375,0.00006163001],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000053239655,0.00016231346,0.00030874243,0.000021645461,0.00004900189,0.00001445069,0.00020923636,0.00008854515,0.000071669514],"category_scores_gemma":[0.0000027919893,0.000053152107,0.000049185386,0.00014915783,0.00025807877,0.00011069672,0.000019204099,0.00011149924,0.0000033764973],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000053697073,0.00009562128,0.124075204,0.000012717769,0.000014924743,0.0000033784584,0.0002339962,0.000003251032,0.87461936,0.000012703363,0.00044971233,0.00042540918],"study_design_scores_gemma":[0.00035658522,0.00020050028,0.8093811,0.000030252842,0.000021601609,0.000009650202,0.00019503491,0.0000014547383,0.18737577,0.000046125613,0.0021780038,0.00020388931],"about_ca_topic_score_codex":0.0005836253,"about_ca_topic_score_gemma":0.002259725,"teacher_disagreement_score":0.68724364,"about_ca_system_score_codex":0.000008566104,"about_ca_system_score_gemma":0.0000033060592,"threshold_uncertainty_score":0.216748},"labels":[],"label_agreement":null},{"id":"W2164985688","doi":"10.1111/j.1574-6968.2010.01956.x","title":"Effect of trace iron levels and iron withdrawal by chelation on the growth of Candida albicans and Candida vini","year":2010,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":36,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Beef Farmers of Ontario","funders":"","keywords":"Candida albicans; Lactoferrin; Deferiprone; Chelation; Yeast; Chemistry; Microbiology; Food spoilage; Biochemistry; Biology; Bacteria; Inorganic chemistry","score_opus":0.004060770085745794,"score_gpt":0.2266290557387749,"score_spread":0.2225682856530291,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2164985688","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99605453,0.00013804258,0.00001790274,0.003171258,0.00008449988,0.0003416771,0.00008729823,0.00000790342,0.00009689138],"genre_scores_gemma":[0.99908674,0.000011249831,0.000027820834,0.0007111607,0.000032071046,0.000005265099,0.00003101037,0.000009982647,0.0000846725],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9992425,0.00009673149,0.00019836881,0.00024057606,0.000050328672,0.00017153674],"domain_scores_gemma":[0.9992309,0.00038384795,0.00011871761,0.0001959196,0.000024366518,0.000046241206],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003994489,0.00014256718,0.00031906096,0.000038690257,0.000058939164,0.0000037470668,0.00005859598,0.00014232608,0.000045694644],"category_scores_gemma":[0.000120664125,0.00008768611,0.000043697437,0.000055279095,0.0006873646,0.000027254233,0.000018438923,0.00030110808,0.0000015497152],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003597648,0.000019820209,0.22628222,0.000090694935,0.000021327534,0.0000016528621,0.00023061952,1.2407784e-7,0.77121156,0.00002539497,0.0014815133,0.00027531217],"study_design_scores_gemma":[0.0015688065,0.0011103648,0.48070112,0.00007131857,0.00010014871,0.00003619737,0.00004755052,0.0000060368493,0.51590323,0.0000056344475,0.00032825858,0.00012132865],"about_ca_topic_score_codex":0.00048463896,"about_ca_topic_score_gemma":0.00034840117,"teacher_disagreement_score":0.25530833,"about_ca_system_score_codex":0.000019188297,"about_ca_system_score_gemma":0.000022247865,"threshold_uncertainty_score":0.35757357},"labels":[],"label_agreement":null},{"id":"W2165143633","doi":"10.1016/s0378-1097(01)00474-8","title":"Vacuolar H+-ATPase, but not mitochondrial F1F0-ATPase, is required for aluminum resistance in Saccharomyces cerevisiae","year":2001,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Aluminum toxicity and tolerance in plants and animals","field":"Agricultural and Biological Sciences","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"Natural Sciences and Engineering Research Council of Canada; Directorate for Biological Sciences","keywords":"Saccharomyces cerevisiae; ATPase; Biology; Mutant; Biochemistry; Vacuole; Yeast; Mitochondrion; V-ATPase; Enzyme; Cell biology; Gene","score_opus":0.02219435378649175,"score_gpt":0.22502854024942884,"score_spread":0.20283418646293708,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2165143633","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.978528,0.0005089821,0.000022897759,0.018452808,0.0006014196,0.0005485227,0.0010960693,0.000069367314,0.00017188302],"genre_scores_gemma":[0.9808813,0.00022968047,0.00069750455,0.014787544,0.0013157793,0.00009268598,0.000456667,0.0000055404003,0.0015333473],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.99768853,0.00012000567,0.0005415567,0.0007615982,0.000089763,0.00079852465],"domain_scores_gemma":[0.9991463,0.00035744993,0.00021839933,0.00013109503,0.000047841037,0.00009892255],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00025027242,0.0003433787,0.0005290256,0.000041426618,0.00032100792,0.00008184168,0.00051864353,0.00031739334,0.00045553962],"category_scores_gemma":[0.000052248026,0.00016960393,0.00023484752,0.0002838224,0.00021817614,0.00021115366,0.00006744112,0.00024294884,0.00010058535],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00052027375,0.00008043443,0.0032992659,0.00001403261,0.000028762845,0.000051206353,0.00010998121,0.0000011484308,0.95102704,0.000061021092,0.04297217,0.0018346492],"study_design_scores_gemma":[0.001731612,0.00033568763,0.02693438,0.00020742501,0.000038185048,0.00008811414,0.00024468816,0.000013851327,0.094488524,0.0002715557,0.87467045,0.0009755188],"about_ca_topic_score_codex":0.00021677848,"about_ca_topic_score_gemma":0.001553826,"teacher_disagreement_score":0.85653853,"about_ca_system_score_codex":0.00004900641,"about_ca_system_score_gemma":0.000012849518,"threshold_uncertainty_score":0.69162476},"labels":[],"label_agreement":null},{"id":"W2165190091","doi":"10.1016/s0378-1097(03)00753-5","title":"The<i>csbX</i>gene of<i>Azotobacter vinelandii</i>encodes an MFS efflux pump required for catecholate siderophore export","year":2003,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Photosynthetic Processes and Mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":35,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Azotobacter vinelandii; Siderophore; Operon; Efflux; Major facilitator superfamily; Biosynthesis; Mutant; Biochemistry; Biology; Gene; Enterobactin; Microbiology; ATP-binding cassette transporter; Chemistry; Bacteria; Transporter; Genetics; Nitrogenase; Nitrogen fixation","score_opus":0.009816541379020058,"score_gpt":0.23048355796271372,"score_spread":0.22066701658369367,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2165190091","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99201816,0.00031503313,0.0060534007,0.00033253865,0.0005490544,0.0004844631,0.00013561228,0.00002091487,0.00009080225],"genre_scores_gemma":[0.9957301,0.00017759709,0.0012042088,0.00200348,0.000112056514,0.00013026489,0.00037243593,0.000047566336,0.00022226245],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99836075,0.0001057627,0.0003942805,0.0005436185,0.000047719837,0.0005478516],"domain_scores_gemma":[0.9989257,0.000044003456,0.0002236734,0.0006085547,0.00010597325,0.0000921069],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004511242,0.0002813304,0.0002873739,0.000042762196,0.00022097377,0.00002607481,0.00040337624,0.00026881968,0.000010592916],"category_scores_gemma":[0.00011499705,0.0002128504,0.00017548402,0.000073119576,0.00024903932,0.000008569649,0.00006813433,0.00011452027,0.000006934484],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011603518,0.000050585124,0.0002858881,0.00001787319,0.00009506273,0.0000035213163,0.000050899762,0.000008842566,0.99848413,0.000087719774,0.00064810266,0.00015131649],"study_design_scores_gemma":[0.00071479334,0.0003663715,0.000054082277,0.00001106262,0.000036521527,0.00014203014,0.000052976575,0.0000030806884,0.93720824,0.00019566261,0.060956407,0.00025877345],"about_ca_topic_score_codex":0.000013732856,"about_ca_topic_score_gemma":0.00002700109,"teacher_disagreement_score":0.061275918,"about_ca_system_score_codex":0.000018047762,"about_ca_system_score_gemma":0.0000897607,"threshold_uncertainty_score":0.8679787},"labels":[],"label_agreement":null},{"id":"W2165561182","doi":"10.1111/j.1574-6968.2010.02185.x","title":"Lactic acid bacteria fermentation of human milk oligosaccharide components, human milk oligosaccharides and galactooligosaccharides","year":2010,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Infant Nutrition and Health","field":"Nursing","cited_by":143,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"Lactobacillus fermentum; Lactose; Lactic acid; Lactobacillus plantarum; Streptococcus thermophilus; Bacteria; Lactobacillus acidophilus; Leuconostoc mesenteroides; Lactobacillus reuteri; Biochemistry; Lactobacillus; Fermentation; Microbiology; Biology; Hydrolysis; Food science; Chemistry; Probiotic","score_opus":0.01897880616508281,"score_gpt":0.2807699255486338,"score_spread":0.261791119383551,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2165561182","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99107075,0.00015096353,0.000015308267,0.0056565832,0.0021159113,0.00052146503,0.0002537987,0.00013683371,0.00007836904],"genre_scores_gemma":[0.990825,0.000026296273,0.0009911443,0.006651681,0.00041658452,0.000033635304,0.0009719731,0.00005536617,0.000028314067],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9974225,0.00021969154,0.00087167486,0.0006428159,0.00011700755,0.000726322],"domain_scores_gemma":[0.9986213,0.00007699478,0.0005402311,0.00047824104,0.0001023089,0.00018095718],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0004291389,0.00042999894,0.0006615633,0.0004343172,0.0006069278,0.0000794889,0.0003596012,0.0003627526,0.00044255468],"category_scores_gemma":[0.00003636449,0.00044185788,0.00014774788,0.00017122492,0.0006431469,0.00030766218,0.000105538435,0.00074509426,0.00006139181],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001707182,0.00014851992,0.0203954,0.00016892921,0.000058379745,0.000008429906,0.00094548636,1.5584142e-7,0.9708449,0.00038591077,0.006651688,0.00022144183],"study_design_scores_gemma":[0.001947174,0.00024261746,0.13963196,0.00010301125,0.000080326274,0.00019978243,0.00013136322,0.000004660126,0.8545085,0.0002095599,0.002477469,0.00046355877],"about_ca_topic_score_codex":0.00079419493,"about_ca_topic_score_gemma":0.00032237833,"teacher_disagreement_score":0.11923656,"about_ca_system_score_codex":0.00008718744,"about_ca_system_score_gemma":0.000021621328,"threshold_uncertainty_score":0.9998033},"labels":[],"label_agreement":null},{"id":"W2168670597","doi":"10.1111/1574-6968.12435","title":"Genomic analysis of<i>Pseudomonas aeruginosa</i>PA96, the host of carbapenem resistance plasmid pOZ176","year":2014,"lang":"en","type":"letter","venue":"FEMS Microbiology Letters","topic":"Antibiotic Resistance in Bacteria","field":"Biochemistry, Genetics and Molecular Biology","cited_by":16,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Public Health Ontario; University of Toronto; Université Laval; Toronto Public Health; Centre hospitalier universitaire de Québec","funders":"Guangzhou First People's Hospital","keywords":"Biology; Genome; ORFS; Genetics; Plasmid; Contig; Virulence; Whole genome sequencing; Gene; Genomic island; Operon; Microbiology; Open reading frame; Peptide sequence","score_opus":0.006753842619275377,"score_gpt":0.2085701887361056,"score_spread":0.20181634611683025,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2168670597","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.89550394,0.0014364673,0.00035471618,0.099810995,0.0007999383,0.00048203857,0.0011197239,0.000018453446,0.00047371598],"genre_scores_gemma":[0.58105046,0.00040702318,0.0008939165,0.40680584,0.0018255856,0.000027586846,0.007030809,0.00016257986,0.0017961876],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9964245,0.00054272433,0.0010555991,0.0010911308,0.00015229297,0.0007337456],"domain_scores_gemma":[0.9962536,0.00021431773,0.0013599547,0.001962881,0.00016301348,0.00004622243],"candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.00042582792,0.0006714157,0.0014021238,0.00032790107,0.00011287167,0.000024666626,0.0015999699,0.001370382,0.00006201701],"category_scores_gemma":[0.000079687285,0.0005405887,0.00092574884,0.00041760778,0.0015242796,0.000003761816,0.00031274333,0.00083460804,0.0000217925],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008748172,0.00001190604,0.004090423,0.00007807221,0.0020501597,0.00001636813,0.00002800235,0.000031797023,0.59514976,0.000005141818,0.39844587,0.000005022048],"study_design_scores_gemma":[0.00045249244,0.00009461362,0.009365567,0.0000838538,0.0017399031,0.00003599556,0.000019103352,0.0000024753065,0.15770902,0.0000033488438,0.82981163,0.0006819872],"about_ca_topic_score_codex":0.00008825228,"about_ca_topic_score_gemma":0.00018065052,"teacher_disagreement_score":0.43744075,"about_ca_system_score_codex":0.00006255108,"about_ca_system_score_gemma":0.0001313857,"threshold_uncertainty_score":0.99992603},"labels":[],"label_agreement":null},{"id":"W2169036116","doi":"10.1016/j.femsle.2004.01.038","title":"Distribution and composition of the lysis cassette of<i>Lactococcus lactis</i>phages and functional analysis of bacteriophage ul36 holin","year":2004,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Bacteriophages and microbial interactions","field":"Environmental Science","cited_by":26,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"","keywords":"Lysin; Lactococcus lactis; Bacteriophage; Biology; Lysis; Amidase; Microbiology; Peptidoglycan; Molecular biology; Gene; Genetics; Bacteria; Escherichia coli","score_opus":0.005619295797455735,"score_gpt":0.199496754786718,"score_spread":0.19387745898926226,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2169036116","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99717474,0.00003228932,0.00088603044,0.0009234443,0.00013101801,0.00013702309,0.00069552055,0.00000568959,0.000014273519],"genre_scores_gemma":[0.99921006,0.000021630141,0.00014628428,0.00032118335,0.0000112590415,0.000004459461,0.00026662965,0.0000050095996,0.000013471454],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9992493,0.00007170405,0.00028861716,0.00021579306,0.00004058695,0.0001340083],"domain_scores_gemma":[0.99945456,0.000050973787,0.00028188658,0.00017092764,0.0000142015015,0.000027465217],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009434059,0.00011823925,0.00027778695,0.00006339344,0.0000864806,0.000007914285,0.000083970095,0.00007819365,0.00016953344],"category_scores_gemma":[0.0000074294153,0.00009252978,0.00013592732,0.00032582067,0.00062604074,0.00011077835,0.000116530304,0.000107622356,0.0000031462098],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000364746,0.00005479564,0.01751243,0.0000091542115,0.00023661935,9.561528e-7,0.00014145482,0.00053522375,0.9811146,0.0000107560545,0.00018109141,0.00016641397],"study_design_scores_gemma":[0.0002734704,0.000027309581,0.70704156,0.000013139905,0.0003466143,0.00002460618,0.00001856364,0.000008779812,0.2918937,0.0000036327583,0.00028135665,0.00006730717],"about_ca_topic_score_codex":0.0006876107,"about_ca_topic_score_gemma":0.00018675717,"teacher_disagreement_score":0.6895291,"about_ca_system_score_codex":0.000068907204,"about_ca_system_score_gemma":0.000005804371,"threshold_uncertainty_score":0.3773255},"labels":[],"label_agreement":null},{"id":"W2170000887","doi":"10.1111/j.1574-6968.2000.tb08902.x","title":"Effect of<i>rpoS</i>mutations on stress-resistance and invasion of brain microvascular endothelial cells in<i>Escherichia coli</i>K1","year":2000,"lang":"he","type":"article","venue":"FEMS Microbiology Letters","topic":"Escherichia coli research studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":28,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institute of Neurological Disorders and Stroke; Beijing Municipal Education Commission; National Institutes of Health; University of Alberta; Helsingin Yliopisto","keywords":"rpoS; Escherichia coli; Microbiology; Biology; Complementation; Mutant; Enterobacteriaceae; Gene; Strain (injury); Molecular biology; Gene expression; Genetics; Promoter","score_opus":0.004199336652881253,"score_gpt":0.22762471791156158,"score_spread":0.22342538125868033,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2170000887","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9919261,0.0041752914,0.0000141638375,0.0016467635,0.00018006223,0.00092278776,0.00087773567,0.0000082752895,0.00024883426],"genre_scores_gemma":[0.9943878,0.002773132,0.0003133938,0.00152039,0.00011626572,0.000055314882,0.0002483201,0.00005049774,0.00053486857],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9965145,0.0012582863,0.000643243,0.00081293966,0.00012234943,0.00064871175],"domain_scores_gemma":[0.99849033,0.0005129481,0.00025369017,0.0005724211,0.00007425792,0.000096348966],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00071561546,0.0004810928,0.00080799777,0.0001554074,0.00011897044,0.000017224738,0.00038807403,0.0004109934,0.000065927474],"category_scores_gemma":[0.0001904838,0.00045198598,0.0002598772,0.0002877431,0.0015854661,0.000008750109,0.00017842323,0.00042420943,0.000021015445],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0015469247,0.00019337438,0.0028279126,0.00052381254,0.00039171157,0.000023613908,0.0002829996,0.0002093907,0.9893838,0.000007408564,0.0037424108,0.00086660753],"study_design_scores_gemma":[0.0031741268,0.0013367656,0.0012539439,0.00030564054,0.00007935655,0.0000059387735,0.0000486712,0.0000068837335,0.974785,0.0000030493652,0.018650612,0.00035005313],"about_ca_topic_score_codex":0.00017458959,"about_ca_topic_score_gemma":0.00034230054,"teacher_disagreement_score":0.014908201,"about_ca_system_score_codex":0.00004860048,"about_ca_system_score_gemma":0.00010679443,"threshold_uncertainty_score":0.9997932},"labels":[],"label_agreement":null},{"id":"W2171043367","doi":"10.1016/j.femsle.2005.06.004","title":"Thiol specific oxidative stress response in<i>Mycobacteria</i>","year":2005,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Tuberculosis Research and Epidemiology","field":"Medicine","cited_by":60,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"Oxidative stress; Oxidative phosphorylation; Transcription (linguistics); Biology; Biochemistry; Metabolism; Gene expression; Mycobacterium bovis; Gene; Transcription factor; Thiol; Microbiology; Molecular biology; Chemistry; Mycobacterium tuberculosis","score_opus":0.01932954626266624,"score_gpt":0.2868482765816198,"score_spread":0.26751873031895357,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2171043367","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9210109,0.00042391423,0.000050362403,0.07744345,0.00021680654,0.00037535152,0.00009603984,0.000059001046,0.00032417095],"genre_scores_gemma":[0.96870553,0.0001846447,0.0011511759,0.028879747,0.00046315268,0.00003979602,0.0002961039,0.00002778688,0.00025205337],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.99735254,0.00079544337,0.0004425829,0.00053220236,0.00005714111,0.00082008773],"domain_scores_gemma":[0.99876845,0.0004949422,0.00008607908,0.00043995256,0.00004250367,0.0001680506],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0008856025,0.00023975971,0.0005371716,0.00032356987,0.000059844424,0.000010656931,0.0002087545,0.00025489065,0.000522718],"category_scores_gemma":[0.00031052108,0.0001981598,0.00012539781,0.00021194265,0.00035898708,0.00008678341,0.00009720858,0.00062766863,0.0009978473],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0035128905,0.0001231453,0.041422457,0.000010114064,0.000058480462,0.00014426437,0.0002488857,0.000022739765,0.90191877,0.00001980804,0.05149729,0.0010211691],"study_design_scores_gemma":[0.0038547951,0.000653493,0.32685092,0.00010293043,0.000023122362,0.0007317832,0.00015085636,0.000019861285,0.15589197,0.000009611612,0.51129556,0.0004150538],"about_ca_topic_score_codex":0.000051164585,"about_ca_topic_score_gemma":0.000052286883,"teacher_disagreement_score":0.74602675,"about_ca_system_score_codex":0.0002905904,"about_ca_system_score_gemma":0.00006883663,"threshold_uncertainty_score":0.99978},"labels":[],"label_agreement":null},{"id":"W2171697635","doi":"10.1111/j.1574-6968.2004.tb09773.x","title":"Molecular characterization of extraintestinal pathogenic<i>Escherichia coli</i>(ExPEC) pathogenicity islands in F165-positive<i>E. coli</i>strain from a diseased animal","year":2004,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Escherichia coli research studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Operon; Escherichia coli; Biology; Gene; Pathogenicity island; Genetics; L-arabinose operon; Bacterial adhesin; gal operon; Fimbria; Gene cluster; Chromosome; Microbiology","score_opus":0.006770919702976431,"score_gpt":0.22401663989725162,"score_spread":0.21724572019427518,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2171697635","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9922597,0.0003196172,0.003510512,0.0010234115,0.00010179688,0.0005691425,0.002147212,0.000024380779,0.000044235225],"genre_scores_gemma":[0.9928688,0.00007281034,0.001338477,0.0026826113,0.00013885887,0.00010159304,0.002741117,0.000045286488,0.000010458707],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99767464,0.00033924944,0.00050537224,0.00074045756,0.000120850425,0.00061939744],"domain_scores_gemma":[0.999096,0.00004311845,0.00022618417,0.00039066424,0.0001201867,0.00012384636],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00024918225,0.00037422412,0.00043342446,0.000107623855,0.00008880977,0.000020364554,0.0003824303,0.0002558355,0.000019285015],"category_scores_gemma":[0.00016519381,0.0003875428,0.00020713962,0.00026094075,0.00047589242,0.000012367732,0.00022019251,0.000290879,0.000008800453],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00064078264,0.00026018673,0.0097173415,0.000020949034,0.00014030104,0.00011319643,0.00024336824,0.000048727274,0.98864996,0.000027168468,0.000052430292,0.00008557892],"study_design_scores_gemma":[0.0025407984,0.00050395797,0.22190419,0.000079611775,0.00004177682,0.000019325,0.000070920345,0.000025554667,0.7739209,0.00002445522,0.00042654667,0.00044197097],"about_ca_topic_score_codex":0.0001018874,"about_ca_topic_score_gemma":0.000083518265,"teacher_disagreement_score":0.21472907,"about_ca_system_score_codex":0.00009551418,"about_ca_system_score_gemma":0.00022566869,"threshold_uncertainty_score":0.99985766},"labels":[],"label_agreement":null},{"id":"W2172890427","doi":"10.1093/femsle/fnv128","title":"Considering the changing face of social media in higher education","year":2015,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Impact of Technology on Adolescents","field":"Social Sciences","cited_by":36,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Keyano College","funders":"","keywords":"Social media; Face (sociological concept); Public relations; Sociology; Engineering ethics; Emerging technologies; Political science; Social science; Engineering; Computer science","score_opus":0.04518326028514032,"score_gpt":0.3003178856122233,"score_spread":0.255134625327083,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2172890427","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9337098,0.000105244566,0.000007656815,0.063649826,0.0013792184,0.00012921257,0.0000026991588,0.00004134463,0.00097499473],"genre_scores_gemma":[0.99562603,0.0000024994572,0.00008106023,0.003823307,0.00018292664,0.000006115211,0.0000056410126,0.0000063398725,0.0002660535],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9991839,0.00018582438,0.0001413323,0.000117792486,0.000051571278,0.00031958037],"domain_scores_gemma":[0.9996669,0.00007697207,0.00010544171,0.00009450319,0.000028650034,0.000027480666],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005419817,0.000071720744,0.00012959253,0.00013609605,0.00014235411,0.000010065591,0.00027026996,0.00015545056,0.000043970867],"category_scores_gemma":[0.00015846547,0.000060845254,0.000029719502,0.00024494051,0.0007448618,0.00005598623,0.00006182173,0.00018062483,0.000027713584],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000050115555,0.00019269928,0.064219676,0.000015960723,0.00006205846,0.0000088992765,0.2744466,0.000016325364,0.5038369,0.010133613,0.14043225,0.006584882],"study_design_scores_gemma":[0.004545529,0.0000793584,0.18555605,0.00027244925,0.00008639259,0.00004824598,0.26298127,0.000004716152,0.03752223,0.0035102402,0.50396997,0.0014235689],"about_ca_topic_score_codex":0.00023909363,"about_ca_topic_score_gemma":0.00044392532,"teacher_disagreement_score":0.4663147,"about_ca_system_score_codex":0.0001404774,"about_ca_system_score_gemma":0.00013559191,"threshold_uncertainty_score":0.2744474},"labels":[],"label_agreement":null},{"id":"W2208162331","doi":"10.1093/femsle/fnv234","title":"<i>In vitro</i>screening of mare's milk antimicrobial effect and antiproliverative activity","year":2015,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Salmonella and Campylobacter epidemiology","field":"Agricultural and Biological Sciences","cited_by":21,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"","keywords":"Virulence; Salmonella; Raw milk; Microbiology; Biology; Gene expression; Gene; In vitro; Bacteria; Antimicrobial; Caco-2; Enterobacteriaceae; Food science; Escherichia coli; Biochemistry; Genetics","score_opus":0.017462092460644462,"score_gpt":0.22515707102990276,"score_spread":0.2076949785692583,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2208162331","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99567825,0.00012882527,0.000019119392,0.003568306,0.00023868411,0.00022005304,0.00007841574,0.000022020575,0.000046332938],"genre_scores_gemma":[0.99710083,0.000015490486,0.00020113343,0.0024589058,0.00012902192,0.0000064046544,0.00006983256,0.0000014684812,0.00001690765],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9984058,0.000566973,0.00022890573,0.00038950364,0.000032843738,0.00037593988],"domain_scores_gemma":[0.9992636,0.00042794115,0.00014378082,0.000059965438,0.00002776445,0.000076946664],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000505739,0.00019835205,0.0004866692,0.00003015783,0.000051896364,0.000010042323,0.00017101289,0.00018259507,0.000016330196],"category_scores_gemma":[0.00006536876,0.000088268214,0.00008104133,0.00016132754,0.00028695838,0.000104405546,0.00011650486,0.00019870675,0.000010147702],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00047797515,0.000029392648,0.057208464,0.000005299085,0.000021577169,0.000016984284,0.00008984859,0.000003889414,0.9360367,0.0000021829358,0.002342086,0.0037655793],"study_design_scores_gemma":[0.000992504,0.00042811802,0.12433755,0.000023016473,0.000018298313,0.00015204707,0.000045777913,0.000019330513,0.8704123,0.000014969725,0.0032717742,0.00028432472],"about_ca_topic_score_codex":0.0005606541,"about_ca_topic_score_gemma":0.00007588217,"teacher_disagreement_score":0.06712908,"about_ca_system_score_codex":0.000021527563,"about_ca_system_score_gemma":0.0000054864186,"threshold_uncertainty_score":0.35994732},"labels":[],"label_agreement":null},{"id":"W2235238101","doi":"10.1093/femsle/fnw002","title":"Host receptors for bacteriophage adsorption","year":2016,"lang":"en","type":"review","venue":"FEMS Microbiology Letters","topic":"Bacteriophages and microbial interactions","field":"Environmental Science","cited_by":739,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"Bacteriophage; Host (biology); Receptor; Biology; Adsorption; Computational biology; Microbiology; Chemistry; Ecology; Genetics; Gene; Escherichia coli","score_opus":0.019331760565038818,"score_gpt":0.2749515753564632,"score_spread":0.25561981479142437,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2235238101","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0021057923,0.9822976,0.0010769407,0.0009843896,0.007993854,0.0028216667,0.0020552098,0.00020292882,0.00046160453],"genre_scores_gemma":[0.00002096986,0.99189955,0.0007332733,0.0012231901,0.0004906452,0.0003164711,0.0010691249,0.00010613652,0.004140668],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9977977,0.00015854932,0.00059381686,0.00079943484,0.00003164757,0.000618808],"domain_scores_gemma":[0.99880075,0.0001788967,0.00046780397,0.00045043323,0.000008107103,0.000093978524],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00017153,0.00054937444,0.0010332768,0.00010809864,0.00015120553,0.000046546244,0.0005058703,0.000502184,0.005907532],"category_scores_gemma":[0.000025267007,0.0003997716,0.0007312304,0.00013638943,0.00033824748,0.00017507504,0.00023833786,0.0003160931,0.007941248],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000008438563,0.000025100688,0.0000013862388,0.0003118144,0.00008228143,0.0000027993967,0.000020165016,6.809965e-8,0.60002226,0.00000238604,0.06745936,0.33206397],"study_design_scores_gemma":[0.00018891963,0.000049781967,0.000017362236,0.0014212646,0.00016412543,0.00016755544,0.0000017010321,6.245925e-8,0.00030888166,9.846709e-7,0.9972088,0.0004706043],"about_ca_topic_score_codex":0.000037430964,"about_ca_topic_score_gemma":0.000026977657,"teacher_disagreement_score":0.9297494,"about_ca_system_score_codex":0.00052578456,"about_ca_system_score_gemma":0.000021432787,"threshold_uncertainty_score":0.99984545},"labels":[],"label_agreement":null},{"id":"W2281054784","doi":"10.1093/femsle/fnv124","title":"Bringing guest scientists to the university biology classroom via the web: Graphical Abstract Figure.","year":2015,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Evaluation of Teaching Practices","field":"Social Sciences","cited_by":11,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Laurentian University","funders":"University of Toronto Mississauga; University of Toronto","keywords":"Scope (computer science); Engineering ethics; Undergraduate research; Library science; Computer science; Sociology; Medical education; Engineering; Medicine","score_opus":0.06483740133420307,"score_gpt":0.343758783494108,"score_spread":0.2789213821599049,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2281054784","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.67478704,0.000065023654,0.0004785947,0.31948876,0.002426139,0.00024962242,0.0000137723955,0.00008306019,0.002407971],"genre_scores_gemma":[0.9896317,0.000010129962,0.00031113924,0.0087100705,0.000533419,0.0000025554446,0.000019098248,0.000008009987,0.00077383773],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9976509,0.0012651706,0.00016074006,0.00034393586,0.00012572043,0.00045354],"domain_scores_gemma":[0.9986283,0.0006836509,0.00016152741,0.00031241064,0.00008908086,0.00012498445],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0043392875,0.0001224422,0.0001325669,0.00012614173,0.0012755533,0.00007941927,0.0010414134,0.00014269636,0.000114307375],"category_scores_gemma":[0.00079920294,0.00008346343,0.00007883203,0.0004133755,0.0011425344,0.00017570658,0.0001749627,0.00046383333,0.0007450732],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00005840511,0.00006544554,0.03232435,0.000002809715,0.00010601625,0.000021381455,0.013365711,0.00023099958,0.22501713,0.0048343255,0.72196114,0.0020122584],"study_design_scores_gemma":[0.00019437632,0.000025275873,0.008066792,0.000006756779,0.000021502474,0.000012014587,0.0012413235,0.000015811913,0.00009783862,0.00007292574,0.9901171,0.00012833293],"about_ca_topic_score_codex":0.0024410198,"about_ca_topic_score_gemma":0.004604979,"teacher_disagreement_score":0.3148447,"about_ca_system_score_codex":0.000181713,"about_ca_system_score_gemma":0.00016984099,"threshold_uncertainty_score":0.9810654},"labels":[],"label_agreement":null},{"id":"W2288927029","doi":"10.1093/femsle/fnv216","title":"Colonization and release processes of viruses and prokaryotes on artificial marine macroaggregates","year":2015,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Bacteriophages and microbial interactions","field":"Environmental Science","cited_by":15,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Takuvik Joint International Laboratory","funders":"Agence Nationale de la Recherche","keywords":"Marine bacteriophage; Water column; Bacteria; Biology; Colonization; Chemistry; Virus; Microbiology; Bacterial virus; Biophysics; Ecology; Virology; Bacteriophage; Escherichia coli; Biochemistry","score_opus":0.01652507722375083,"score_gpt":0.22951440088058303,"score_spread":0.2129893236568322,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2288927029","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99811095,0.000039957322,0.00003275519,0.0014197992,0.000100699275,0.00014195705,0.000027364404,0.000017356915,0.00010915613],"genre_scores_gemma":[0.9978369,0.000026852471,0.00041253504,0.0015801559,0.000027363889,0.0000066224993,0.000029654066,0.000008193645,0.00007170836],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9994905,0.00003146091,0.0001350256,0.00019854949,0.000019871906,0.00012456543],"domain_scores_gemma":[0.9997409,0.0000414382,0.000085285814,0.000074148345,0.000012208124,0.00004599956],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00005695195,0.00009465967,0.000112708774,0.00003066847,0.000054284737,0.000016319162,0.000052673222,0.00005079474,0.00010299966],"category_scores_gemma":[0.00006355526,0.000081121056,0.000010927217,0.00008461803,0.00034188633,0.00009714134,0.000109628214,0.00006738725,0.000040044895],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007984567,0.0000450334,0.019076204,0.000011936625,0.000008961354,0.0000032242285,0.00023768452,0.000028277078,0.9763467,0.000009985465,0.0022584042,0.0018937683],"study_design_scores_gemma":[0.0006806344,0.00052025885,0.07628788,0.00006199744,0.00004415123,0.00021404703,0.00014451613,0.00003383842,0.8995672,0.00017125365,0.02192214,0.00035211275],"about_ca_topic_score_codex":0.00031669956,"about_ca_topic_score_gemma":0.0002516499,"teacher_disagreement_score":0.0767795,"about_ca_system_score_codex":0.00002587264,"about_ca_system_score_gemma":0.0000078624835,"threshold_uncertainty_score":0.33080205},"labels":[],"label_agreement":null},{"id":"W2296531672","doi":"10.1093/femsle/fnw052","title":"Nitric oxide scavengers differentially inhibit ammonia oxidation in ammonia-oxidizing archaea and bacteria","year":2016,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Microbial Community Ecology and Physiology","field":"Environmental Science","cited_by":47,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Waterloo","funders":"","keywords":"Chemistry; Archaea; Nitric oxide; Ammonia; Biochemistry; Inorganic chemistry; Organic chemistry","score_opus":0.006707266453108948,"score_gpt":0.18821030624457383,"score_spread":0.18150303979146487,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2296531672","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99701285,0.000024029776,0.00017118372,0.002261464,0.00019261434,0.0002299548,0.000022256298,0.000040762483,0.000044906177],"genre_scores_gemma":[0.99618596,0.000057419787,0.001381756,0.0021410862,0.000038277227,0.000017262513,0.00007306622,0.000019250947,0.00008595203],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99808365,0.0005307473,0.00033378272,0.00046493323,0.00003238343,0.00055447983],"domain_scores_gemma":[0.99922013,0.00024747418,0.00014291125,0.00030938478,0.0000053370904,0.000074783915],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00032411274,0.0002473615,0.00031472594,0.00014594314,0.00017214073,0.0000135271375,0.00032992061,0.00024288755,0.00080336],"category_scores_gemma":[0.000045463064,0.00019777514,0.00005571565,0.00016891252,0.0008616545,0.00017071648,0.00046995917,0.0003012633,0.0004285145],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000082200684,0.000048576505,0.043951083,0.0000048302168,0.000016782078,0.000010036381,0.00018304471,0.000006431409,0.95224136,0.000013306527,0.0017256448,0.0017167076],"study_design_scores_gemma":[0.0015981825,0.000085763415,0.8048526,0.000052881318,0.000018164408,0.000089561145,0.000031406922,0.0000031777943,0.18575189,0.0002831462,0.0067603975,0.00047280942],"about_ca_topic_score_codex":0.0005311711,"about_ca_topic_score_gemma":0.0036121455,"teacher_disagreement_score":0.76648945,"about_ca_system_score_codex":0.00017747929,"about_ca_system_score_gemma":0.000009685262,"threshold_uncertainty_score":0.8796229},"labels":[],"label_agreement":null},{"id":"W2337055076","doi":"10.1093/femsle/fnw095","title":"Characterization of a highly potent antimicrobial peptide microcin N from uropathogenic<i>Escherichia coli</i>","year":2016,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Antimicrobial Peptides and Activities","field":"Immunology and Microbiology","cited_by":16,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"CanBiocin (Canada); University of Alberta","funders":"Alberta Innovates; Hospital for Sick Children","keywords":"Escherichia coli; Peptide; Chemistry; Edman degradation; Antimicrobial; Biochemistry; Peptide sequence; Circular dichroism; Proteolysis; Trypsin; Antimicrobial peptides; Residue (chemistry); Enzyme","score_opus":0.0067295368365084055,"score_gpt":0.1820537605117106,"score_spread":0.1753242236752022,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2337055076","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98845434,0.00016826457,0.0027447792,0.003724605,0.001494015,0.00039671382,0.0027907249,0.00014074828,0.000085812535],"genre_scores_gemma":[0.9893691,0.0001605298,0.00060446886,0.0068048574,0.00018536233,0.000017368053,0.0013869369,0.00007048379,0.0014008863],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9972411,0.00038473145,0.00078781595,0.00076707633,0.000030062323,0.0007892593],"domain_scores_gemma":[0.99855053,0.00018820389,0.0005911783,0.00052351283,0.000101939695,0.00004463136],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00019908982,0.0005035206,0.0008068263,0.00019458814,0.00020675517,0.000020947211,0.00053148984,0.0004919498,0.00043472162],"category_scores_gemma":[0.000033477634,0.00038361785,0.0003457945,0.0001759895,0.0010052092,0.0002239303,0.00023053952,0.0003078676,0.0010508901],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00039281906,0.00015816132,0.0014969467,0.000016855121,0.0003383511,0.000014547536,0.00021975441,9.737926e-7,0.97889566,0.00004581416,0.017220698,0.0011994183],"study_design_scores_gemma":[0.0020422784,0.000114788476,0.007393741,0.00016435211,0.00010086605,0.00006737051,0.00003293675,1.5869863e-7,0.9536796,0.000008910794,0.035903804,0.0004911742],"about_ca_topic_score_codex":0.00027661436,"about_ca_topic_score_gemma":0.000026521464,"teacher_disagreement_score":0.02521604,"about_ca_system_score_codex":0.00009422083,"about_ca_system_score_gemma":0.00008032935,"threshold_uncertainty_score":0.9998616},"labels":[],"label_agreement":null},{"id":"W2338566327","doi":"10.1093/femsle/fnv081","title":"Arbuscular mycorrhizal fungal diversity associated with Eleocharis obtusa and Panicum capillare growing in an extreme petroleum hydrocarbon-polluted sedimentation basin","year":2015,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Mycorrhizal Fungi and Plant Interactions","field":"Agricultural and Biological Sciences","cited_by":21,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Espace pour la vie; Université de Montréal","funders":"Genome Canada","keywords":"Operational taxonomic unit; Biology; Botany; Rhizosphere; Glomeromycota; Ecology; Mycorrhiza; Symbiosis","score_opus":0.020268435499791678,"score_gpt":0.1892328998429801,"score_spread":0.16896446434318843,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2338566327","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99723816,0.00014054187,0.000010209091,0.0014601012,0.00022631734,0.00017308827,0.00062387966,0.00006757377,0.000060109644],"genre_scores_gemma":[0.9948371,0.000026591548,0.000055151788,0.0019142709,0.00009631618,0.0000070963138,0.0030331342,0.0000022311947,0.00002809556],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99864125,0.00028554435,0.00019330031,0.00040817706,0.000089371846,0.00038232887],"domain_scores_gemma":[0.99929416,0.00035545407,0.00011076234,0.00006074172,0.00004235375,0.00013650498],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00026391973,0.00020701723,0.0002505263,0.000048391423,0.00022991051,0.000046991205,0.00016933335,0.00016299238,0.0001538774],"category_scores_gemma":[0.00006538446,0.000103797254,0.00004903906,0.00022476868,0.000028008002,0.00033883468,0.000108700275,0.00025792106,0.000031739924],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000087479,0.00004248182,0.48637858,0.0000011252731,0.000025984255,0.000047006488,0.0002598182,0.000035028486,0.5118097,0.000006280555,0.0012438757,0.00006263994],"study_design_scores_gemma":[0.0024512708,0.0024400766,0.9552052,0.00034569894,0.0002766524,0.00082980905,0.006637987,0.0023206847,0.020594833,0.00016599048,0.006650892,0.0020809066],"about_ca_topic_score_codex":0.0027657864,"about_ca_topic_score_gemma":0.002240797,"teacher_disagreement_score":0.49121484,"about_ca_system_score_codex":0.00010423752,"about_ca_system_score_gemma":0.000010447829,"threshold_uncertainty_score":0.4232729},"labels":[],"label_agreement":null},{"id":"W2339420565","doi":"10.1093/femsle/fnw102","title":"Resistance-nodulation-division efflux pump acrAB is modulated by florfenicol and contributes to drug resistance in the fish pathogen<i>Piscirickettsia salmonis</i>","year":2016,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Aquaculture disease management and microbiota","field":"Immunology and Microbiology","cited_by":68,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University","funders":"Fondo de Financiamiento de Centros de Investigación en Áreas Prioritarias; Universidad Austral de Chile","keywords":"Florfenicol; Efflux; Biology; Microbiology; Ethidium bromide; Pathogen; Antibiotics; Antibiotic resistance; Drug resistance; Genetics","score_opus":0.004572128854320702,"score_gpt":0.19915974577192203,"score_spread":0.19458761691760132,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2339420565","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9087738,0.0027693615,0.00046725725,0.08478039,0.00053643127,0.0011985212,0.0012032351,0.00009003938,0.0001810111],"genre_scores_gemma":[0.959363,0.00010609514,0.00008042993,0.031305745,0.000038684226,0.000110407294,0.0010003356,0.000037391263,0.007957909],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9969767,0.0005912805,0.0005900855,0.00095562125,0.000042989017,0.00084336183],"domain_scores_gemma":[0.9986628,0.00036110348,0.0002096011,0.0006452498,0.0000753282,0.000045873003],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0005925545,0.00046695006,0.0005167823,0.00020746747,0.0003968991,0.00006457087,0.00068534317,0.00034518,0.00015165206],"category_scores_gemma":[0.000098046185,0.00029751108,0.00013953919,0.00042658782,0.0005291152,0.00014617213,0.00022951854,0.00029407334,0.00036528683],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00016081745,0.000046261735,0.0025107889,0.000012230942,0.000093150826,0.0000073331084,0.0005212459,3.291116e-7,0.556057,0.00007871849,0.4403832,0.00012898666],"study_design_scores_gemma":[0.003862866,0.000034236946,0.03220099,0.000231735,0.000098325574,0.000012792205,0.00018799028,2.1862472e-7,0.10537129,0.0001594349,0.85723126,0.0006088654],"about_ca_topic_score_codex":0.000029485587,"about_ca_topic_score_gemma":0.00043622512,"teacher_disagreement_score":0.45068565,"about_ca_system_score_codex":0.00012823238,"about_ca_system_score_gemma":0.000024915147,"threshold_uncertainty_score":0.9999477},"labels":[],"label_agreement":null},{"id":"W2339951693","doi":"10.1093/femsle/fnw099","title":"Properties and biotechnological applications of ice-binding proteins in bacteria","year":2016,"lang":"en","type":"review","venue":"FEMS Microbiology Letters","topic":"Physiological and biochemical adaptations","field":"Environmental Science","cited_by":59,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"","keywords":"Gammaproteobacteria; Alphaproteobacteria; Biology; Bacteria; Actinobacteria; 16S ribosomal RNA; Genetics","score_opus":0.034285802315222914,"score_gpt":0.23271064323051802,"score_spread":0.1984248409152951,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2339951693","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.13737752,0.857868,0.0001915954,0.0011813093,0.00008233829,0.0027591968,0.00033052443,0.000096251,0.0001132742],"genre_scores_gemma":[0.00787905,0.98983455,0.0011889446,0.0001779358,0.000047873924,0.000649511,0.00011456128,0.000016113145,0.00009143507],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.99880755,0.000082681036,0.00038054681,0.00044586847,0.000028660395,0.0002546973],"domain_scores_gemma":[0.9995038,0.00007648769,0.0001923963,0.00018993774,0.000002609139,0.000034759378],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000083670326,0.0002263628,0.0006363589,0.00006731573,0.00004575459,0.0000057219218,0.0003229739,0.00039655532,0.00017504004],"category_scores_gemma":[0.000030436902,0.00012034538,0.000101599806,0.00022337928,0.0009809958,0.000034493587,0.00036217782,0.00024850434,0.00021872376],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000021321207,0.00003620526,0.000016934338,0.00022581326,0.0000103804205,8.5498823e-7,0.0000054684638,9.931984e-8,0.84214675,0.000013190208,0.00009331958,0.15744883],"study_design_scores_gemma":[0.00012467614,0.000054777807,0.000076725635,0.0016845294,0.00003387673,0.00002266281,0.0000048016964,2.7396365e-7,0.007651129,0.000083513034,0.9899225,0.00034053306],"about_ca_topic_score_codex":0.000020145368,"about_ca_topic_score_gemma":0.000005010395,"teacher_disagreement_score":0.9898292,"about_ca_system_score_codex":0.0000813865,"about_ca_system_score_gemma":0.000007917976,"threshold_uncertainty_score":0.49075422},"labels":[],"label_agreement":null},{"id":"W2340285878","doi":"10.1093/femsle/fnv152","title":"Stable, temperature-sensitive recombinant strain of<i>Mycobacterium smegmatis</i>generated through the substitution of a psychrophilic<i>ligA</i>gene","year":2015,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Bacterial Genetics and Biotechnology","field":"Biochemistry, Genetics and Molecular Biology","cited_by":17,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Victoria","funders":"","keywords":"Psychrophile; Strain (injury); Biology; Mycobacterium smegmatis; Microbiology; Gene; Bacteria; Recombinant DNA; Genetics; Mycobacterium tuberculosis; Tuberculosis","score_opus":0.01125540819973089,"score_gpt":0.21887324115868653,"score_spread":0.20761783295895564,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2340285878","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99441993,0.0006481527,0.00041568486,0.0022101582,0.0013363868,0.0003594373,0.0005453451,0.000016873913,0.00004801614],"genre_scores_gemma":[0.9952861,0.0002682611,0.0015391677,0.0014137833,0.0002212908,0.000015215477,0.0011751886,0.000026269308,0.00005471948],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99835354,0.00024136208,0.0005004489,0.0004595036,0.00006381667,0.00038130165],"domain_scores_gemma":[0.9987711,0.000015295898,0.00033639188,0.0005829525,0.0002416806,0.000052631658],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00030332082,0.00028032594,0.00039393894,0.00005726579,0.00007407374,0.000013367145,0.0003554132,0.0005041888,0.0000065564836],"category_scores_gemma":[0.00005587948,0.00020593133,0.00012945141,0.00022834587,0.00080426736,0.0000063457755,0.00016026858,0.00020630023,0.000006227747],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00023226846,0.000077516845,0.00014139288,0.00001419431,0.0001579626,0.0000048598013,0.00013357664,0.00008283234,0.9930132,0.00014500172,0.005850863,0.00014630712],"study_design_scores_gemma":[0.0008761262,0.0004859154,0.00055456586,0.00002118411,0.000041914896,0.00015143637,0.00007954718,0.0000027466285,0.97502404,0.000044121276,0.022485837,0.00023257475],"about_ca_topic_score_codex":0.00010509814,"about_ca_topic_score_gemma":0.000053585914,"teacher_disagreement_score":0.017989194,"about_ca_system_score_codex":0.000024964003,"about_ca_system_score_gemma":0.00013947452,"threshold_uncertainty_score":0.8397636},"labels":[],"label_agreement":null},{"id":"W2340708694","doi":"10.1093/femsle/fnv166","title":"Recombinant production of omega-3 fatty acids by probiotic<i>E</i>scherichia<i>coli</i>Nissle 1917","year":2015,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Fatty Acid Research and Health","field":"Nursing","cited_by":38,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"Dairy Farmers of Ontario","keywords":"Eicosapentaenoic acid; Docosahexaenoic acid; Escherichia coli; Dry weight; Food science; Omega 3 fatty acid; Probiotic; Fatty acid; Bacteria; Chemistry; Microbiology; Biology; Biochemistry; Polyunsaturated fatty acid; Gene; Botany","score_opus":0.022901097995125186,"score_gpt":0.2699094802742961,"score_spread":0.24700838227917093,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2340708694","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9494759,0.0005360625,0.0002352395,0.04387344,0.0047046114,0.00084689644,0.000050714196,0.00011948686,0.0001576398],"genre_scores_gemma":[0.98540634,0.00005471674,0.0063083097,0.0069009643,0.0003774267,0.000054594882,0.00040148324,0.000074342,0.00042179742],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99739766,0.00043086315,0.000520579,0.0006074467,0.00013545794,0.0009080106],"domain_scores_gemma":[0.9987653,0.000057223835,0.0002504789,0.0005119484,0.00015840151,0.00025666362],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00086760515,0.00028381485,0.0004868899,0.00016522914,0.0001803833,0.000026110001,0.00038329168,0.00024952015,0.000022210384],"category_scores_gemma":[0.0002109118,0.00025185486,0.000111858986,0.00037475652,0.00056320126,0.00017524438,0.00009545612,0.0005962842,0.00018203877],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00042334665,0.0001870813,0.0044317204,0.00007886062,0.000031815063,0.000003665051,0.00047585898,0.000012850586,0.7067434,0.0000071191967,0.286923,0.0006812653],"study_design_scores_gemma":[0.0017146217,0.00090501545,0.0016236167,0.000085604006,0.000027592147,0.0000980136,0.00018167657,0.000010175166,0.8542519,0.00005457056,0.14069779,0.00034940042],"about_ca_topic_score_codex":0.00026687447,"about_ca_topic_score_gemma":0.000040151994,"teacher_disagreement_score":0.1475085,"about_ca_system_score_codex":0.00026049474,"about_ca_system_score_gemma":0.00011252557,"threshold_uncertainty_score":0.9999934},"labels":[],"label_agreement":null},{"id":"W2343033511","doi":"10.1093/femsle/fnw113","title":"Lichen-forming fungus<i>Caloplaca flavoruscens</i>inhibits transcription factors and chromatin remodeling system in fungi","year":2016,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Lichen and fungal ecology","field":"Agricultural and Biological Sciences","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"Rural Development Administration","keywords":"Fungus; Lichen; Yeast; Biology; Hypha; Gene; Microbiology; Chemistry; Botany; Biochemistry","score_opus":0.011453134891756539,"score_gpt":0.17722931700284927,"score_spread":0.16577618211109274,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2343033511","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9958927,0.00030810456,0.000040033592,0.0028614947,0.00037166354,0.00025319375,0.00007344757,0.00011479213,0.000084557556],"genre_scores_gemma":[0.99837065,0.00004241278,0.00008472868,0.0012009457,0.00016870117,0.000012711468,0.00006555377,0.0000030062897,0.000051274466],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99833584,0.0001629763,0.000395348,0.0004944067,0.000046764646,0.0005646838],"domain_scores_gemma":[0.9994333,0.00027034906,0.00011240823,0.000068924084,0.00002331146,0.00009170346],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00031926605,0.0002510755,0.0003499414,0.000046616446,0.00016065572,0.000024935938,0.00017790037,0.00029331353,0.00006429127],"category_scores_gemma":[0.000028526874,0.00009025919,0.00008568304,0.00017110407,0.0001344346,0.00016329165,0.000058990776,0.00017549752,0.000052344247],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000029200372,0.000016655122,0.04565348,0.000013851683,0.000011546364,0.0000060879574,0.0002356317,0.0000013307902,0.9469027,0.000053527972,0.0002461514,0.0068298527],"study_design_scores_gemma":[0.0024404607,0.00060143013,0.5245147,0.0007049887,0.00006221785,0.0003874855,0.0017420471,0.00013976225,0.44995633,0.00005164928,0.017886136,0.0015128134],"about_ca_topic_score_codex":0.00022918939,"about_ca_topic_score_gemma":0.00095277425,"teacher_disagreement_score":0.49694636,"about_ca_system_score_codex":0.00011670444,"about_ca_system_score_gemma":0.00000665653,"threshold_uncertainty_score":0.3680663},"labels":[],"label_agreement":null},{"id":"W2409154657","doi":"10.1093/femsle/fnv160","title":"A novel DNA-binding protein from<i>Campylobacter jejuni</i>bacteriophage NCTC12673","year":2015,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Bacteriophages and microbial interactions","field":"Environmental Science","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Alberta Glycomics Centre; University of Alberta","funders":"Directorate for Biological Sciences; Alberta Innovates; University of Alberta","keywords":"DNA; Campylobacter jejuni; Bacteriophage; Biology; Molecular biology; Recombinant DNA; Electrophoretic mobility shift assay; Phagemid; Escherichia coli; Biochemistry; Nucleoprotein; Gene; Bacteria; Gene expression; Genetics","score_opus":0.015789029048156756,"score_gpt":0.21434348907797487,"score_spread":0.1985544600298181,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2409154657","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99318075,0.000012125344,0.00052832,0.00311738,0.0011064359,0.00041850502,0.00030396853,0.0001279371,0.0012045628],"genre_scores_gemma":[0.9828097,0.0000024503634,0.0063724928,0.0068243467,0.00024779717,0.000060108483,0.00046612154,0.00006168589,0.0031552473],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9980838,0.000098490505,0.00038804888,0.00068254507,0.00007540667,0.0006717296],"domain_scores_gemma":[0.9990447,0.000036707792,0.00020161178,0.0004720052,0.0000146763505,0.0002302596],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.0001854666,0.0003616293,0.0003323998,0.000073650735,0.00017050609,0.00009760482,0.0004918378,0.00021039562,0.003447212],"category_scores_gemma":[0.000032678483,0.00033425775,0.00014937215,0.00020713516,0.00038641554,0.00041529408,0.00042672895,0.00038929642,0.0066577024],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000056789904,0.00013114921,0.0007461579,0.0000018411746,0.000044606037,0.000029904513,0.00036763484,0.000007160211,0.9787131,0.0000038912094,0.019400943,0.0004968523],"study_design_scores_gemma":[0.0020660358,0.0001693204,0.013053905,0.000072119365,0.000054325563,0.00034450466,0.00016948156,0.000010517892,0.53202665,0.000016086038,0.45109364,0.000923396],"about_ca_topic_score_codex":0.0012516886,"about_ca_topic_score_gemma":0.0003087388,"teacher_disagreement_score":0.4466864,"about_ca_system_score_codex":0.00039448892,"about_ca_system_score_gemma":0.000020224552,"threshold_uncertainty_score":0.99991095},"labels":[],"label_agreement":null},{"id":"W2412327281","doi":"10.1093/femsle/fnv093","title":"<i>AsaGEI2b</i>: a new variant of a genomic island identified in the<i>Aeromonas salmonicida</i>subsp.<i>salmonicida</i>JF3224 strain isolated from a wild fish in Switzerland","year":2015,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Aquaculture disease management and microbiota","field":"Immunology and Microbiology","cited_by":26,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institut Universitaire de Cardiologie et de Pneumologie de Québec; Université Laval","funders":"Fonds de recherche du Québec – Nature et technologies; Natural Sciences and Engineering Research Council of Canada","keywords":"Aeromonas salmonicida; Biology; Salmo; Aeromonas; Genomic island; Genetics; Plasmid; Virulence; Genotyping; Genome; Microbiology; genomic DNA; Locus (genetics); Gene; Genotype; Bacteria; Fishery; Fish <Actinopterygii>","score_opus":0.013842770283337653,"score_gpt":0.213884584760818,"score_spread":0.20004181447748035,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2412327281","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9891887,0.0030259092,0.0002530388,0.004241791,0.0008779904,0.0010949961,0.0009258859,0.000070277725,0.00032142425],"genre_scores_gemma":[0.98808116,0.000058284015,0.00010059164,0.007633103,0.00009661992,0.000042578027,0.0032928241,0.000054532993,0.000640329],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.99598086,0.0008693709,0.0011211482,0.0009540063,0.000059631944,0.0010150123],"domain_scores_gemma":[0.9983902,0.00023039427,0.00046009984,0.0007917687,0.000050995055,0.00007653898],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.000860913,0.0006130721,0.0009553229,0.00040985865,0.00009583197,0.0000573308,0.0011976138,0.0006152656,0.00028703097],"category_scores_gemma":[0.000066066605,0.00049477734,0.00025691948,0.0005312647,0.00042630266,0.00017192673,0.00029282045,0.00090282207,0.0004102687],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0007799066,0.0003003094,0.00610782,0.00001658039,0.00034833522,0.00031356054,0.006135312,0.00006051432,0.8708878,0.000049181708,0.11480144,0.00019921982],"study_design_scores_gemma":[0.099318095,0.0024168391,0.26062953,0.0015255099,0.0022482935,0.0027644583,0.01485283,0.00008613756,0.1168341,0.002332206,0.4897181,0.007273903],"about_ca_topic_score_codex":0.005948496,"about_ca_topic_score_gemma":0.010875623,"teacher_disagreement_score":0.7540537,"about_ca_system_score_codex":0.00017821333,"about_ca_system_score_gemma":0.00019546981,"threshold_uncertainty_score":0.9997504},"labels":[],"label_agreement":null},{"id":"W2416033144","doi":"10.1093/femsle/fnv177","title":"Spontaneous and on point: Do spontaneous mutations used for laboratory experiments cause pleiotropic effects that might confound bacterial infection and evolution assays?","year":2015,"lang":"en","type":"review","venue":"FEMS Microbiology Letters","topic":"Vibrio bacteria research studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":11,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Regina","funders":"Canadian Institutes of Health Research","keywords":"Point mutation; Biology; Genetics; Phenotype; Selectable marker; Experimental evolution; Mutation; Antibiotic resistance; Antibiotics; Mutant; Mutagenesis; Streptomycin; Computational biology; Gene; Plasmid","score_opus":0.022875008801935732,"score_gpt":0.30693856307061607,"score_spread":0.28406355426868035,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2416033144","genre_codex":"empirical","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.5758021,0.42039242,0.000059929796,0.00007607589,0.0010050868,0.0018758813,0.00075464864,0.000027776592,0.0000060711513],"genre_scores_gemma":[0.063467816,0.92456293,0.00031255133,0.0004892119,0.0014458679,0.0011435223,0.008181502,0.00021553918,0.00018106581],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9976521,0.0005737961,0.00034932245,0.00084229757,0.000076126315,0.0005063182],"domain_scores_gemma":[0.99890107,0.00020571421,0.00028286313,0.00036731284,0.000106660475,0.00013640778],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00026011476,0.00057761883,0.0009929594,0.0002000701,0.00022048905,0.00009576041,0.00014468112,0.00061997713,0.0000065424438],"category_scores_gemma":[0.00020293113,0.00050792797,0.00015798351,0.00007703041,0.00040266514,0.000011634778,0.00018740263,0.00025528492,0.000013892537],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00043474734,0.000100663325,0.000088994624,0.0026608177,0.0013822576,0.0007167468,0.00016547285,0.0000011330492,0.98101336,0.000018610051,0.0061964607,0.00722072],"study_design_scores_gemma":[0.0021440992,0.001390375,0.0001547953,0.0009808826,0.00054586574,0.004921019,0.000017790613,6.329309e-7,0.0041850936,0.000005829268,0.98486507,0.0007885524],"about_ca_topic_score_codex":0.000031735563,"about_ca_topic_score_gemma":0.00010101907,"teacher_disagreement_score":0.97866863,"about_ca_system_score_codex":0.00028763825,"about_ca_system_score_gemma":0.00019100436,"threshold_uncertainty_score":0.99973726},"labels":[],"label_agreement":null},{"id":"W2420163264","doi":"10.1093/femsle/fnw151","title":"A novel isolate and widespread abundance of the candidate alphaproteobacterial order (Ellin 329), in southern Appalachian peatlands","year":2016,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Peatlands and Wetlands Ecology","field":"Environmental Science","cited_by":24,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Laurentian University","funders":"Northern Research Station; Joint Genome Institute; U.S. Forest Service; Office of Science; Appalachian State University; U.S. Department of Energy","keywords":"Acidobacteria; Peat; Ecology; Proteobacteria; Biology; Planctomycetes; Bacteria; 16S ribosomal RNA","score_opus":0.004270044926079382,"score_gpt":0.1783352110046875,"score_spread":0.1740651660786081,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2420163264","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9944227,0.000016252028,0.0005262221,0.004326137,0.0002487725,0.0002268648,0.00011509403,0.000011243124,0.00010671706],"genre_scores_gemma":[0.99813247,0.0000158109,0.00024921543,0.0011841829,0.000048297163,0.00001675753,0.000015397922,0.000013001607,0.00032488213],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99887174,0.00009366302,0.00026217473,0.00035863605,0.000037169153,0.0003766345],"domain_scores_gemma":[0.9994863,0.00007094449,0.00014393187,0.00025161472,0.0000044947687,0.00004268975],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00020916309,0.00017236952,0.0002430433,0.000036827485,0.00007207461,0.000008548409,0.00028689313,0.00013393135,0.00024511726],"category_scores_gemma":[0.000024017625,0.000094114206,0.000044795368,0.00012201207,0.0006288903,0.00005679663,0.0002162003,0.00012515715,0.000042333577],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000055537646,0.00002112434,0.33191824,0.0000021566675,0.0000094465795,0.0000020353666,0.0003252369,0.0000091944075,0.6669026,0.000002699887,0.00035770336,0.000393983],"study_design_scores_gemma":[0.0074769077,0.000254465,0.9434002,0.00015335002,0.000040488438,0.00025827045,0.000100805235,0.0000694962,0.025429405,0.00011919183,0.021963999,0.00073343015],"about_ca_topic_score_codex":0.0011541437,"about_ca_topic_score_gemma":0.00464792,"teacher_disagreement_score":0.64147323,"about_ca_system_score_codex":0.0000541581,"about_ca_system_score_gemma":0.000011161396,"threshold_uncertainty_score":0.3837866},"labels":[],"label_agreement":null},{"id":"W2486272663","doi":"10.1093/femsle/fnw176","title":"Beyond the single answer: a process-oriented exam for science students","year":2016,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Problem and Project Based Learning","field":"Social Sciences","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"","keywords":"Process (computing); Test (biology); Frame (networking); Mathematics education; Computer science; Graduate students; Function (biology); Psychology; Data science; Pedagogy","score_opus":0.016775277050233184,"score_gpt":0.311255203970488,"score_spread":0.2944799269202548,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2486272663","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9669674,0.00007277678,0.0019185721,0.028093206,0.0009505759,0.0006575233,0.000023035556,0.00009376931,0.0012231589],"genre_scores_gemma":[0.9917867,0.000007359545,0.00032296995,0.0069184382,0.00026964533,0.00007612119,0.0000055548257,0.000011216011,0.00060199667],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.99843085,0.00019388863,0.00017094563,0.00038743668,0.00014965373,0.0006672147],"domain_scores_gemma":[0.9991279,0.0003642358,0.00012304581,0.00019267244,0.0001253347,0.0000668083],"candidate_categories":["sts"],"consensus_categories":[],"category_scores_codex":[0.0019644287,0.00011787838,0.00012790154,0.0001014646,0.0013670843,0.0000780362,0.00087698014,0.00007976771,0.000054821332],"category_scores_gemma":[0.00042583756,0.00006710481,0.000056788107,0.00042228153,0.0021056528,0.00023444938,0.00007923208,0.000103358274,0.00005054389],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000031066105,0.000041047915,0.0118382545,0.0000043717037,0.000016640806,0.0000012106951,0.0074466886,0.000001555703,0.9703657,0.0010777973,0.004240211,0.0049354713],"study_design_scores_gemma":[0.0027449857,0.00047183456,0.0047808825,0.00013022573,0.000060634597,0.000018678265,0.004526447,0.0000022647255,0.08261176,0.0016192109,0.9022636,0.00076946215],"about_ca_topic_score_codex":0.00008916594,"about_ca_topic_score_gemma":0.00013396218,"teacher_disagreement_score":0.8980234,"about_ca_system_score_codex":0.00013745157,"about_ca_system_score_gemma":0.00021367577,"threshold_uncertainty_score":0.999933},"labels":[],"label_agreement":null},{"id":"W2543288726","doi":"10.1093/femsle/fnw244","title":"Evidence for polyploidy in the globally important diazotroph<i>Trichodesmium</i>","year":2016,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Microbial Community Ecology and Physiology","field":"Environmental Science","cited_by":67,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University","funders":"Bundesministerium für Bildung und Forschung; Deutsche Forschungsgemeinschaft; Natural Environment Research Council; Sight Research UK","keywords":"Trichodesmium; Diazotroph; Biology; Polyploid; Genome; Genome size; Gene; Evolutionary biology; Genetics; Nitrogen fixation; Bacteria","score_opus":0.029855338109341358,"score_gpt":0.25690893378958735,"score_spread":0.227053595680246,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2543288726","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9766593,0.00016871477,0.00061361236,0.021518663,0.000304084,0.0004938463,0.00004985611,0.000025911922,0.00016598735],"genre_scores_gemma":[0.96950877,0.00009459109,0.00048895105,0.029605052,0.00006976437,0.00007871077,0.000024961299,0.000011869903,0.00011732411],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.998144,0.0005319167,0.00033350885,0.00037697802,0.00003833203,0.00057531655],"domain_scores_gemma":[0.99793094,0.0013924696,0.00013504112,0.00049807865,0.0000062715344,0.00003717551],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009164528,0.00019341975,0.000230772,0.000039817594,0.00019821606,0.000011117965,0.0011047043,0.00017122265,0.0008642521],"category_scores_gemma":[0.00020184871,0.0001100732,0.00010755516,0.00018746546,0.0006763766,0.0001284875,0.0002492629,0.00021369757,0.00039184853],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000117996926,0.00004772644,0.042169884,0.0000022343168,0.000010854653,0.0000060842926,0.0001774085,0.000014887911,0.8771354,0.000086503904,0.079736836,0.00049419183],"study_design_scores_gemma":[0.005094333,0.0013352521,0.59389347,0.00019698692,0.00011167635,0.0005771152,0.00016097652,0.000013391108,0.032404743,0.004602321,0.35996073,0.0016490015],"about_ca_topic_score_codex":0.00031237942,"about_ca_topic_score_gemma":0.0016866924,"teacher_disagreement_score":0.8447307,"about_ca_system_score_codex":0.00014780412,"about_ca_system_score_gemma":0.000015937896,"threshold_uncertainty_score":0.94629544},"labels":[],"label_agreement":null},{"id":"W2561874389","doi":"10.1093/femsle/fnw280","title":"Cag-delta (Cag3) protein from the<i>Helicobacter pylori</i>26695<i>cag</i>type IV secretion system forms ring-like supramolecular assemblies","year":2016,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Helicobacter pylori-related gastroenterology studies","field":"Medicine","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal","funders":"Canadian Institutes of Health Research","keywords":"Helicobacter pylori; CagA; Secretion; Biology; Immunogold labelling; Virulence; Flagellum; Cell envelope; Escherichia coli; Type three secretion system; Helicobacter; Microbiology; Gene; Molecular biology; Biochemistry; Genetics; Antibody","score_opus":0.01073979531891326,"score_gpt":0.21710306898348664,"score_spread":0.20636327366457338,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2561874389","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9550239,0.00040205795,0.0015410918,0.039055295,0.001806672,0.0013757064,0.0002666868,0.0004106079,0.00011801443],"genre_scores_gemma":[0.9808232,0.00006436122,0.00035638115,0.016866537,0.00069701916,0.00019965452,0.0005573168,0.00011567584,0.00031985532],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9962001,0.0004405021,0.0008478741,0.0010648646,0.00019615902,0.0012505306],"domain_scores_gemma":[0.9977304,0.0002404688,0.00039713772,0.0011443519,0.00028520505,0.00020243452],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00048805735,0.0007103169,0.0009414889,0.00020020292,0.00033906175,0.00005033935,0.0005406629,0.0005681498,0.0000738103],"category_scores_gemma":[0.00017908936,0.00041364267,0.0002914973,0.00031842,0.00079573586,0.00022073854,0.00034988334,0.0007631938,0.00076586497],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006378083,0.000062260806,0.06444073,0.00004444657,0.0011758519,0.00016248236,0.0003386658,0.0000016431625,0.91775185,0.00004712992,0.015015283,0.0003218758],"study_design_scores_gemma":[0.028915992,0.0051522013,0.23679242,0.00519364,0.003049849,0.0037337749,0.0016912692,0.00007988037,0.216305,0.00007887678,0.4955833,0.003423795],"about_ca_topic_score_codex":0.0003732167,"about_ca_topic_score_gemma":0.00019612312,"teacher_disagreement_score":0.70144683,"about_ca_system_score_codex":0.00043089484,"about_ca_system_score_gemma":0.00008657768,"threshold_uncertainty_score":0.99983156},"labels":[],"label_agreement":null},{"id":"W2579138124","doi":"10.1093/femsle/fnx001","title":"Biofilm formation and antimicrobial resistance genes of coagulase-negative staphylococci isolated from cows with mastitis in Argentina","year":2017,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Milk Quality and Mastitis in Dairy Cows","field":"Agricultural and Biological Sciences","cited_by":50,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal","funders":"Agriculture and Agri-Food Canada; Natural Sciences and Engineering Research Council of Canada; Universidad de Navarra; Universidad de Buenos Aires; Canadian Dairy Commission; Dairy Farmers of Canada","keywords":"Mastitis; Coagulase; Microbiology; Staphylococcus haemolyticus; Biology; Biofilm; SCCmec; Staphylococcus; Antimicrobial; Antibiotic resistance; Staphylococcus aureus; Antibiotics; Bacteria; Methicillin-resistant Staphylococcus aureus; Genetics","score_opus":0.016041411877131127,"score_gpt":0.20919902247706335,"score_spread":0.19315761059993222,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2579138124","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99621814,0.00011466115,0.000074717216,0.002184402,0.00012927211,0.00025113055,0.00091023766,0.000017852384,0.000099598314],"genre_scores_gemma":[0.9982696,0.0001058489,0.0006578795,0.000542826,0.000057321926,0.000008561499,0.00030144805,0.0000013984426,0.000055090044],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9989999,0.0001263044,0.00027764728,0.0003065938,0.00003903763,0.0002505098],"domain_scores_gemma":[0.99934894,0.00012144979,0.0003325184,0.00011866557,0.00004185983,0.00003657207],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001433986,0.00015762485,0.0002769099,0.000022880386,0.0002605117,0.000047857164,0.00027455643,0.00012264188,0.00008996451],"category_scores_gemma":[0.0000353025,0.00007586204,0.000038995517,0.00007304433,0.0004997163,0.00020192911,0.00009949235,0.00012446781,0.0000068568434],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00021633548,0.000029556366,0.020675799,0.000015205029,0.000019935356,0.000013734252,0.0001776332,0.000003458298,0.9760683,0.00004125513,0.0014469323,0.0012918107],"study_design_scores_gemma":[0.0018167978,0.00028884772,0.50077873,0.00040870914,0.000032839715,0.000029632602,0.000310546,0.000035899146,0.48378372,0.00020217289,0.011726817,0.00058529543],"about_ca_topic_score_codex":0.0015496468,"about_ca_topic_score_gemma":0.018159151,"teacher_disagreement_score":0.49228463,"about_ca_system_score_codex":0.000017334158,"about_ca_system_score_gemma":0.0000059464355,"threshold_uncertainty_score":0.9997569},"labels":[],"label_agreement":null},{"id":"W2588492498","doi":"10.1093/femsle/fnx035","title":"An uncharacterized gene coding a conserved lytic transglycosylase domain (RL4716) is required for proper cell envelope function in Rhizobium leguminosarum","year":2017,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Legume Nitrogen Fixing Symbiosis","field":"Agricultural and Biological Sciences","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Regina","funders":"","keywords":"Rhizobium leguminosarum; Biology; Mutant; Cell envelope; Transposon mutagenesis; Rhizobia; Mutagenesis; Rhizobium; Cell biology; Gene; Lytic cycle; Genetics; Phenotype; Transposable element; Rhizobiaceae; Bacteria; Symbiosis; Escherichia coli","score_opus":0.022598185227251027,"score_gpt":0.22071029011253784,"score_spread":0.19811210488528683,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2588492498","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98374814,0.000032749507,0.000030435198,0.014186035,0.00052977604,0.0009495694,0.00041375787,0.00008487194,0.000024661409],"genre_scores_gemma":[0.9910353,0.0000049448286,0.0005767512,0.007247968,0.00027660793,0.0001365153,0.0005830174,0.0000072912158,0.0001315916],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9976893,0.00022129819,0.00046337294,0.0008073688,0.000067498695,0.0007511383],"domain_scores_gemma":[0.9990781,0.00012314378,0.00032104418,0.00029398588,0.00006319262,0.00012055214],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005498611,0.00035081457,0.0004575798,0.000046091962,0.00063711335,0.00017516188,0.0007246273,0.00032072954,0.0001619405],"category_scores_gemma":[0.00003899785,0.00017459142,0.00020803124,0.00010489488,0.0002924112,0.00035992372,0.000072269126,0.00021419914,0.00008486425],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0004517716,0.00010934851,0.015492226,0.000017775006,0.00003364946,0.000016248394,0.00022889981,1.0348226e-7,0.98194814,0.0000067712454,0.001189134,0.00050592906],"study_design_scores_gemma":[0.002114433,0.0004774509,0.068667315,0.000039389866,0.00004601053,0.000032433752,0.000093448776,0.000009696493,0.9226765,0.00003993383,0.0052599995,0.0005433867],"about_ca_topic_score_codex":0.00040849062,"about_ca_topic_score_gemma":0.0004133568,"teacher_disagreement_score":0.059271645,"about_ca_system_score_codex":0.00010186643,"about_ca_system_score_gemma":0.000026810361,"threshold_uncertainty_score":0.7119631},"labels":[],"label_agreement":null},{"id":"W2596233094","doi":"10.1093/femsle/fnx061","title":"Characterisation of a gene encoding a membrane protein that affects exopolysaccharide production and intracellular Mg2+ concentrations in Ensifer meliloti","year":2017,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Legume Nitrogen Fixing Symbiosis","field":"Agricultural and Biological Sciences","cited_by":14,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Intracellular; Mutant; Sinorhizobium meliloti; Biology; Gene; Biochemistry; Phenotype; Transmembrane protein; Mutation; Biofilm; Cell biology; Microbiology; Bacteria; Genetics; Receptor","score_opus":0.01928425661356321,"score_gpt":0.20596341000066565,"score_spread":0.18667915338710245,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2596233094","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.990215,0.00006746263,0.0000022080224,0.008889333,0.00021750006,0.00054488453,0.000025875595,0.000026383632,0.000011335877],"genre_scores_gemma":[0.99926776,0.000015769527,0.00018927075,0.00025975134,0.00014234387,0.000036358804,0.0000664096,0.0000018404938,0.000020515457],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99902046,0.0001297425,0.00017943283,0.00036442722,0.000050238068,0.00025568387],"domain_scores_gemma":[0.99946797,0.000048644502,0.0002952114,0.00012594408,0.000026238253,0.0000359928],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00030074458,0.00014577244,0.00022881872,0.00003235497,0.00023170923,0.000052614487,0.00019725226,0.00012342366,0.00003497408],"category_scores_gemma":[0.00014113342,0.000075223164,0.000046051246,0.000071065486,0.00024330307,0.00024612676,0.000055950888,0.00013827186,0.000005808375],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000025894213,0.000029313018,0.036480747,0.000010402773,0.000017229475,0.000005480033,0.0002296196,2.466606e-7,0.96252745,0.000015798918,0.00005061731,0.00060718844],"study_design_scores_gemma":[0.00014409766,0.000047075184,0.09595483,0.000057112327,0.000011125133,0.000025386242,0.000046518173,0.000002842325,0.903501,0.000006124639,0.00007762818,0.00012628488],"about_ca_topic_score_codex":0.0003607854,"about_ca_topic_score_gemma":0.00043494036,"teacher_disagreement_score":0.05947408,"about_ca_system_score_codex":0.000036119636,"about_ca_system_score_gemma":0.0000069423004,"threshold_uncertainty_score":0.30675116},"labels":[],"label_agreement":null},{"id":"W2605359437","doi":"10.1093/femsle/fnx068","title":"Commentary on ‘Inhibition by acetylene of ammonia oxidation in Nitrosomonas europaea’","year":2017,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Wastewater Treatment and Nitrogen Removal","field":"Environmental Science","cited_by":13,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Agriculture and Agri-Food Canada","funders":"","keywords":"Nitrosomonas europaea; Nitrification; Ammonia monooxygenase; Nitrosomonas; Ammonia; Environmental chemistry; Denitrification; Chemistry; Nitrate; Ammonium; Nitrite; Acetylene; Inorganic chemistry; Aerobic denitrification; Ammonium chloride; Denitrifying bacteria; Nitrogen; Organic chemistry","score_opus":0.007242109759839054,"score_gpt":0.20669803407359646,"score_spread":0.19945592431375742,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2605359437","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9901847,0.000011062994,0.000011926264,0.009310738,0.00011326309,0.00016136869,0.000044898785,0.000011742972,0.00015027488],"genre_scores_gemma":[0.9950057,0.0000078137955,0.0006550052,0.0039352756,0.000026076652,0.0000068394634,0.00027873833,0.000010816094,0.000073690535],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.999215,0.00008507924,0.00017673083,0.00025469312,0.00004708222,0.0002213843],"domain_scores_gemma":[0.9995029,0.000019456094,0.0001535462,0.00029407587,0.0000020340967,0.000027997416],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00010745881,0.0001347963,0.00015018032,0.000035826033,0.00012522524,0.0000141806195,0.00019184579,0.00006233772,0.00012906636],"category_scores_gemma":[0.000005173344,0.00012019224,0.00004692365,0.00003093572,0.0003136,0.0001276893,0.00011891085,0.00009636008,0.00024219767],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000057502617,0.000103363825,0.068156965,0.0000016106949,0.000010643651,0.000014628655,0.000059403865,0.000017124838,0.8928809,0.0000010179888,0.03832655,0.0003702754],"study_design_scores_gemma":[0.0010404342,0.00010900348,0.04294841,0.000016369384,0.000009244868,0.000009652937,0.000008380138,0.000004635064,0.95263904,0.000014506169,0.0030794253,0.000120896926],"about_ca_topic_score_codex":0.0007153663,"about_ca_topic_score_gemma":0.00013831549,"teacher_disagreement_score":0.05975813,"about_ca_system_score_codex":0.0001072972,"about_ca_system_score_gemma":0.0000013459498,"threshold_uncertainty_score":0.49012977},"labels":[],"label_agreement":null},{"id":"W2653955","doi":"10.1016/0378-1097(89)90140-7","title":"Alberta's natural resources: today's wealth for future generations","year":2010,"lang":"en","type":"dissertation","venue":"FEMS Microbiology Letters","topic":"Global Energy and Sustainability Research","field":"Energy","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"Strong","keywords":"Natural resource; Revenue; Prosperity; Business; Natural resource economics; Government (linguistics); Natural capital; Resource (disambiguation); Resource productivity; Legislation; Government revenue; Investment (military); Economics; Finance; Economic growth; Political science","score_opus":0.005308707389733062,"score_gpt":0.2554349155294743,"score_spread":0.25012620813974124,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2653955","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9733833,0.0008790105,0.000017888166,0.013514951,0.007208675,0.00084327353,0.00017112563,0.0001121139,0.0038696774],"genre_scores_gemma":[0.58959925,0.00018600418,0.003164209,0.02060807,0.01229951,0.0016176971,0.10415977,0.00043427848,0.26793122],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9973302,0.00023271074,0.0004980137,0.0008583116,0.00010155778,0.0009792355],"domain_scores_gemma":[0.99839914,0.00028761587,0.00021751173,0.00065737456,0.00030059778,0.00013777056],"candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.00026868726,0.0005097852,0.000573487,0.0002502378,0.00058560167,0.000083153755,0.00067460694,0.0014639159,0.0003147888],"category_scores_gemma":[0.0002449124,0.00046082295,0.00039161774,0.00021957316,0.00019272612,0.00007901951,0.00004981192,0.0014862583,0.00009300396],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0009274423,0.00013948232,0.00010035565,0.00040035957,0.00046870764,0.000022424261,0.004053565,0.00063947414,0.84898376,0.017187512,0.11593975,0.011137175],"study_design_scores_gemma":[0.00068706047,0.00007934146,0.00038754,0.000026777932,0.000057982958,0.000027827113,0.0012401636,0.000033836262,0.005015899,0.00048730895,0.9914017,0.00055456115],"about_ca_topic_score_codex":0.0058437926,"about_ca_topic_score_gemma":0.11925275,"teacher_disagreement_score":0.87546194,"about_ca_system_score_codex":0.00021024035,"about_ca_system_score_gemma":0.00023509165,"threshold_uncertainty_score":0.9998324},"labels":[],"label_agreement":null},{"id":"W2659571351","doi":"10.1093/femsle/fnx135","title":"Phylogenetic diversification and developmental implications of poly-(R)-3-hydroxyalkanoate gene cluster assembly in prokaryotes","year":2017,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"biodegradable polymer synthesis and properties","field":"Materials Science","cited_by":16,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Public Health Agency of Canada","keywords":"Phylogenetic tree; Gene cluster; Gene; Biology; Operon; Polyhydroxyalkanoates; Genome; Genetics; Phylogenetics; Computational biology; Evolutionary biology; Bacteria; Escherichia coli","score_opus":0.023098994061904653,"score_gpt":0.2243348845841198,"score_spread":0.20123589052221513,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2659571351","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99268717,0.0018850961,0.00011014018,0.0048930463,0.00012279174,0.00014580977,0.000055451354,0.0000111964455,0.000089281515],"genre_scores_gemma":[0.9971658,0.00004800861,0.0020757315,0.0005976337,0.000020144127,0.000022342003,0.00001491171,0.000008016128,0.000047442856],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99918336,0.0000681309,0.00022643904,0.00027878792,0.000026609187,0.00021669295],"domain_scores_gemma":[0.9994572,0.000042050982,0.00018243222,0.00027313567,0.000017224553,0.000028001403],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00019240114,0.00011610083,0.00017937215,0.00006825019,0.00026318818,0.000047982867,0.00033248967,0.000078603334,0.000032934884],"category_scores_gemma":[0.000026892172,0.00009696811,0.00002445235,0.000026096795,0.00039257066,0.00010785162,0.00016365397,0.000052525345,0.0000341128],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000019822695,0.000019426063,0.062774636,0.000010014012,0.000008454848,5.0346426e-7,0.00025074815,3.7594495e-7,0.93257856,0.000012161739,0.00017205044,0.004153236],"study_design_scores_gemma":[0.0001990947,0.000014686856,0.20957665,0.000015223705,0.0000074962527,0.000019415233,0.00002458561,0.000004756573,0.7898047,0.000014200469,0.00021735925,0.000101808706],"about_ca_topic_score_codex":0.0004650605,"about_ca_topic_score_gemma":0.00011300246,"teacher_disagreement_score":0.14680202,"about_ca_system_score_codex":0.00002664342,"about_ca_system_score_gemma":0.000024595123,"threshold_uncertainty_score":0.3954245},"labels":[],"label_agreement":null},{"id":"W2731921306","doi":"10.1093/femsle/fnx138","title":"A Burkholderia endophyte of the ancient maize landrace Chapalote utilizes c-di-GMP-dependent and independent signaling to suppress diverse plant fungal pathogen targets","year":2017,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Plant-Microbe Interactions and Immunity","field":"Agricultural and Biological Sciences","cited_by":12,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"Agricultural Adaptation Council","keywords":"Biology; Pathogen; Endophyte; Microbiology; Mutant; Sclerotinia sclerotiorum; Rhizoctonia solani; Human pathogen; Gene; Botany; Genetics","score_opus":0.01972088885415433,"score_gpt":0.21184511452139798,"score_spread":0.19212422566724366,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2731921306","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99468803,0.00013745687,0.0000066101798,0.0019849043,0.0008599386,0.00032484808,0.0019350289,0.000019274717,0.00004390967],"genre_scores_gemma":[0.9986,0.00002904868,0.00004767819,0.0010292437,0.000107007,0.00001315403,0.000085418535,0.0000020028785,0.00008644636],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99873936,0.00015117922,0.00025585468,0.0003730286,0.00008184459,0.00039872114],"domain_scores_gemma":[0.9992582,0.00011338236,0.00027036478,0.00022739795,0.00004494777,0.00008567579],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002596174,0.00020789995,0.00027592908,0.000022691054,0.0008397102,0.0001001981,0.00070989534,0.00011585,0.000109320295],"category_scores_gemma":[0.00005614696,0.00008471419,0.00011206767,0.000048574315,0.00021387625,0.00011723164,0.0006240667,0.00025642128,0.000019144054],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010286669,0.00005238974,0.017098779,0.000005781282,0.000039415412,0.000024506553,0.00029853484,0.000017082179,0.9808675,0.0000055917294,0.00095626834,0.0005312793],"study_design_scores_gemma":[0.00050872,0.00016412992,0.43915334,0.000095329524,0.00003672794,0.00037087564,0.0005001594,0.000013544274,0.5422843,0.0000066533844,0.016542174,0.00032400203],"about_ca_topic_score_codex":0.0011138876,"about_ca_topic_score_gemma":0.0010486523,"teacher_disagreement_score":0.43858317,"about_ca_system_score_codex":0.000030694693,"about_ca_system_score_gemma":0.000008052024,"threshold_uncertainty_score":0.6458457},"labels":[],"label_agreement":null},{"id":"W2735060344","doi":"10.1093/femsle/fnx147","title":"Salmonella enterica serovar Typhi siderophore production is elevated and Fur inactivation causes cell filamentation and attenuation in macrophages","year":2017,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Salmonella and Campylobacter epidemiology","field":"Agricultural and Biological Sciences","cited_by":9,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institut National de la Recherche Scientifique; Université de Montréal","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Siderophore; Microbiology; Virulence; Salmonella enterica; Salmonella typhi; Biology; Salmonella; Serotype; Mutant; Motility; Bacteria; Enterobacteriaceae; Enterobactin; Gene; Cell biology; Genetics; Escherichia coli","score_opus":0.019537514046238658,"score_gpt":0.23304109172042609,"score_spread":0.21350357767418743,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2735060344","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98677886,0.0001433401,0.0000028232314,0.012541232,0.00022371183,0.00024509963,0.000024858165,0.000024279247,0.000015783578],"genre_scores_gemma":[0.9974063,0.00025229392,0.00007261458,0.0018635588,0.00013032253,0.000016316835,0.00017626562,0.0000020228865,0.00008028597],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99887097,0.00016062176,0.00023569886,0.00046096023,0.0000313742,0.00024040532],"domain_scores_gemma":[0.99948776,0.000089720685,0.00026048403,0.000095252995,0.000031214702,0.000035588935],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00019806175,0.00016232095,0.00021121807,0.000030059571,0.00030080104,0.000053795182,0.00011472406,0.00014646476,0.000034045726],"category_scores_gemma":[0.00006485322,0.00008521698,0.000025417216,0.00006894024,0.00019842495,0.00017575423,0.000074502124,0.00012786021,0.000013412635],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00004243815,0.00001992446,0.20980762,0.0000064952055,0.000007611898,0.0000033858983,0.0001861662,0.0000010070931,0.78582734,0.0000013497098,0.000977574,0.0031190685],"study_design_scores_gemma":[0.0002272088,0.00009665596,0.82398,0.000016897126,0.000010212571,0.000033772627,0.00018658827,0.00000812343,0.17454521,0.000052720803,0.000695234,0.00014738522],"about_ca_topic_score_codex":0.00059089,"about_ca_topic_score_gemma":0.00018083386,"teacher_disagreement_score":0.6141724,"about_ca_system_score_codex":0.00003710856,"about_ca_system_score_gemma":0.0000031104557,"threshold_uncertainty_score":0.34750476},"labels":[],"label_agreement":null},{"id":"W2739559315","doi":"10.1093/femsle/fnx161","title":"Comparative genomics of a drug-resistant Pseudomonas aeruginosa panel and the challenges of antimicrobial resistance prediction from genomes","year":2017,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Antibiotic Resistance in Bacteria","field":"Biochemistry, Genetics and Molecular Biology","cited_by":53,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"Canadian Institutes of Health Research; Joint Programming Initiative on Antimicrobial Resistance; Cystic Fibrosis Canada; Genome Canada; World Health Organization","keywords":"Pseudomonas aeruginosa; Resistome; Genome; Biology; Genomics; Antibiotic resistance; Whole genome sequencing; Comparative genomics; Computational biology; Genetics; Drug resistance; Gene; Microbiology; Antibiotics; Bacteria; Mobile genetic elements","score_opus":0.017511503383050867,"score_gpt":0.23081090951536953,"score_spread":0.21329940613231868,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2739559315","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9915383,0.0047798385,0.0001012162,0.0021018384,0.00028346755,0.00030923157,0.0006906793,0.000006119497,0.0001893503],"genre_scores_gemma":[0.996092,0.002183193,0.0011557011,0.0001978203,0.00015699037,0.000005743937,0.00012925323,0.000016685952,0.000062565494],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99866796,0.0001913862,0.00041888346,0.00044349805,0.000044078548,0.00023419053],"domain_scores_gemma":[0.9983533,0.00007627089,0.0006714131,0.0007933527,0.00007418331,0.000031449756],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00026918112,0.00022020933,0.000509478,0.000033633707,0.00020584691,0.000023800661,0.0005243508,0.00015982092,0.0000039185934],"category_scores_gemma":[0.000042358854,0.00017073246,0.00011733115,0.00001810969,0.0024008455,0.000008587014,0.00022863629,0.000114885675,0.0000017131249],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0014010178,0.000031102674,0.0045471163,0.00004414668,0.0002741373,0.000002235807,0.00076413463,0.0000053729054,0.9907986,0.00021527839,0.0018711523,0.00004570359],"study_design_scores_gemma":[0.002870156,0.00006179662,0.10121493,0.00011848322,0.00010398214,0.000013490877,0.0004578608,0.000004219443,0.8898616,0.0000850458,0.004941983,0.0002664604],"about_ca_topic_score_codex":0.00010820149,"about_ca_topic_score_gemma":0.0003517693,"teacher_disagreement_score":0.10093701,"about_ca_system_score_codex":0.000016992159,"about_ca_system_score_gemma":0.000043058084,"threshold_uncertainty_score":0.88460153},"labels":[],"label_agreement":null},{"id":"W2747621589","doi":"10.1093/femsle/fnx057","title":"Why aren't women choosing STEM academic jobs? Observations from a small-group discussion at the 2016 American Society for Microbiology annual meeting","year":2017,"lang":"en","type":"letter","venue":"FEMS Microbiology Letters","topic":"Diversity and Career in Medicine","field":"Social Sciences","cited_by":11,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Face (sociological concept); Medical education; Psychology; Gerontology; Medicine; Sociology; Social science","score_opus":0.042298592321307255,"score_gpt":0.2700227803440513,"score_spread":0.22772418802274405,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2747621589","genre_codex":"commentary","genre_gemma":"commentary","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"commentary","genre_consensus":"commentary","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.25246894,0.0004072175,0.0002218459,0.73973024,0.0026464884,0.00080535846,0.003562612,0.000103100174,0.000054159125],"genre_scores_gemma":[0.000984469,0.0002874171,0.0005636364,0.97628015,0.008420579,0.00018475887,0.0054214657,0.000070933085,0.0077865883],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9956699,0.00088152586,0.00054429186,0.0011137635,0.00018759497,0.0016029218],"domain_scores_gemma":[0.9965151,0.001288393,0.0011810514,0.00073345646,0.0001512689,0.0001307598],"candidate_categories":["metaepi_narrow","sts","research_integrity"],"consensus_categories":["sts","research_integrity"],"category_scores_codex":[0.0018397433,0.0005640827,0.0009116634,0.00010409265,0.0037898207,0.0001539842,0.0028188294,0.0015821178,0.00009568084],"category_scores_gemma":[0.00018408604,0.00036959906,0.0006287138,0.00017707428,0.0050157974,0.00018952454,0.00079735275,0.0025176876,0.00005734702],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000035786823,0.000009339066,0.0017306873,0.000023065804,0.0003448615,0.000014475938,0.015896454,0.000001690468,0.119533725,0.000002977263,0.86153036,0.0008765468],"study_design_scores_gemma":[0.0005895438,0.00007097962,0.000291397,0.00026189673,0.00021190956,0.000009285063,0.016795898,7.6657886e-7,0.00008285483,0.000030337838,0.9811247,0.00053044496],"about_ca_topic_score_codex":0.004482819,"about_ca_topic_score_gemma":0.0016899303,"teacher_disagreement_score":0.25148448,"about_ca_system_score_codex":0.0012379161,"about_ca_system_score_gemma":0.00022512268,"threshold_uncertainty_score":0.9998756},"labels":[],"label_agreement":null},{"id":"W2751333527","doi":"10.1093/femsle/fnx186","title":"Climate change and vector-borne diseases of public health significance","year":2017,"lang":"en","type":"review","venue":"FEMS Microbiology Letters","topic":"Viral Infections and Vectors","field":"Medicine","cited_by":157,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Public Health Agency of Canada","funders":"","keywords":"Climate change; Vector (molecular biology); Disease; Public health; Vector control; Geography; Ecology; Environmental health; Environmental resource management; Natural resource economics; Environmental science; Biology; Medicine; Economics","score_opus":0.20193110625684718,"score_gpt":0.38222661829734234,"score_spread":0.18029551204049515,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2751333527","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0007096337,0.9923403,0.000009080331,0.0043909526,0.0005778948,0.0010734661,0.000822103,0.000050950825,0.000025605184],"genre_scores_gemma":[0.0025819368,0.99454373,0.000038437076,0.0014067608,0.0004258243,0.00013728351,0.00078532734,0.00004578085,0.000034938905],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9982062,0.00024302566,0.00051815895,0.00047520731,0.000036037036,0.00052138197],"domain_scores_gemma":[0.9983724,0.00007787092,0.0007597857,0.00056165986,0.00003660445,0.00019168544],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00029546773,0.00035799012,0.0020569435,0.0002776452,0.0001777154,0.000023153198,0.00016227525,0.00024312733,0.000039208702],"category_scores_gemma":[0.00006451144,0.00026853802,0.0003483308,0.00012176915,0.00050715584,0.00006569405,0.00010651048,0.00034615412,0.000031702817],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000009407932,0.00014212496,0.0012919236,0.017517602,0.00037812034,0.000029462844,0.000069954665,8.453301e-9,0.000602269,0.000121463076,0.005484628,0.974353],"study_design_scores_gemma":[0.00028864187,0.00025789835,0.0035164827,0.005214636,0.00036445056,0.00024110159,0.0000044290205,1.3868535e-7,0.0000027489389,4.474636e-7,0.98988575,0.0002232805],"about_ca_topic_score_codex":0.00013902473,"about_ca_topic_score_gemma":0.000016507063,"teacher_disagreement_score":0.9844011,"about_ca_system_score_codex":0.00011833926,"about_ca_system_score_gemma":0.00016456825,"threshold_uncertainty_score":0.9999767},"labels":[],"label_agreement":null},{"id":"W2765205265","doi":"10.1093/femsle/fnx218","title":"Biofilm-based photobioreactors: their design and improving productivity through efficient supply of dissolved inorganic carbon","year":2017,"lang":"en","type":"review","venue":"FEMS Microbiology Letters","topic":"Algal biology and biofuel production","field":"Energy","cited_by":55,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"Biofilm; Photobioreactor; Biomass (ecology); Suspension (topology); Dissolved organic carbon; Biochemical engineering; Suspension culture; Carbon fibers; Chemistry; Environmental science; Chemical engineering; Process engineering; Computer science; Environmental chemistry; Bacteria; Cell culture; Ecology; Biology; Engineering; Mathematics","score_opus":0.043045832256111055,"score_gpt":0.2647799967981167,"score_spread":0.22173416454200565,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2765205265","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.071464166,0.924147,0.00015797517,0.00034552082,0.0017037939,0.0018012497,0.00021249773,0.00013444017,0.000033328506],"genre_scores_gemma":[0.1505072,0.8434332,0.0014761213,0.0003775702,0.0012486356,0.0002697946,0.0023545385,0.0002441498,0.000088789035],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9962529,0.0009458163,0.00075825653,0.0013385301,0.000053390053,0.00065112417],"domain_scores_gemma":[0.99707633,0.00029100658,0.0013402589,0.0011652423,0.000069460366,0.000057723333],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0007590234,0.00083976326,0.0020846026,0.00020916223,0.00025839807,0.000030682626,0.00061888614,0.0010895662,0.00002146251],"category_scores_gemma":[0.0002044048,0.0005887824,0.00038163722,0.0001807337,0.0013843937,0.00006676936,0.00021311344,0.0007896346,0.0000144429805],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000110834546,0.00016303672,0.00009344243,0.0036226753,0.0004840651,0.000010826185,0.0001652101,0.000016337763,0.85033303,0.00001309572,0.00019048095,0.14479698],"study_design_scores_gemma":[0.00095806445,0.00050381426,0.00008804817,0.0032316719,0.0013150232,0.0003253925,0.000023508002,0.000023366818,0.19322205,0.000024226143,0.79847795,0.0018068637],"about_ca_topic_score_codex":0.0008250663,"about_ca_topic_score_gemma":0.0000335776,"teacher_disagreement_score":0.7982875,"about_ca_system_score_codex":0.00017069357,"about_ca_system_score_gemma":0.00023419678,"threshold_uncertainty_score":0.9996564},"labels":[],"label_agreement":null},{"id":"W2767284902","doi":"10.1093/femsle/fnx239","title":"Study of mesophilic Aeromonas salmonicida A527 strain sheds light on the species’ lifestyles and taxonomic dilemma","year":2017,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Aquaculture disease management and microbiota","field":"Immunology and Microbiology","cited_by":29,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval; Institut universitaire de cardiologie et de pneumologie de Québec","funders":"","keywords":"Aeromonas salmonicida; Dilemma; Mesophile; Strain (injury); Biology; Aeromonas; Marine species; Microbiology; Zoology; Ecology; Fishery; Bacteria; Genetics; Fish <Actinopterygii>; Epistemology; Anatomy; Philosophy","score_opus":0.02190766497762481,"score_gpt":0.22824604401901408,"score_spread":0.20633837904138927,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2767284902","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98709965,0.00038201406,0.0000034176383,0.009213789,0.0007343668,0.0009815788,0.00022094694,0.000049421178,0.0013147944],"genre_scores_gemma":[0.99654895,0.000034467354,0.0000107835185,0.0018895597,0.00010048725,0.000048189144,0.0001686954,0.000029913615,0.0011689656],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99797624,0.00035028916,0.0004488631,0.00065892586,0.000025497302,0.00054018263],"domain_scores_gemma":[0.99812675,0.00016207025,0.0004817222,0.0011587703,0.000037212576,0.000033454493],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.000373284,0.00042823725,0.0005524611,0.00013320164,0.0008573609,0.000076178316,0.0010708569,0.00025280673,0.00049775967],"category_scores_gemma":[0.0000837882,0.00028948218,0.00015798933,0.000053852484,0.0010214248,0.000097069824,0.00051784987,0.000442115,0.00029936104],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015199056,0.00033882225,0.009642525,0.000011083715,0.000682152,0.000030684707,0.00090894144,0.0000022348736,0.9407177,0.0012449508,0.045985468,0.00028344194],"study_design_scores_gemma":[0.010474532,0.0021238367,0.4614066,0.00018329312,0.00092182204,0.00026355978,0.007271178,7.74312e-7,0.18708803,0.000077137556,0.32839683,0.0017924263],"about_ca_topic_score_codex":0.00012460681,"about_ca_topic_score_gemma":0.00019147836,"teacher_disagreement_score":0.7536297,"about_ca_system_score_codex":0.000038743787,"about_ca_system_score_gemma":0.00002093221,"threshold_uncertainty_score":0.9999557},"labels":[],"label_agreement":null},{"id":"W2767367126","doi":"10.1093/femsle/fnx237","title":"Packaging of Mycobacterium smegmatis bacteria into fecal pellets by the ciliate Tetrahymena pyriformis","year":2017,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Legionella and Acanthamoeba research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval; Institut universitaire de cardiologie et de pneumologie de Québec","funders":"Fonds de recherche du Québec – Nature et technologies; Natural Sciences and Engineering Research Council of Canada","keywords":"Biology; Bacteria; Microbiology; Ciliate; Protozoa; Mycobacterium smegmatis; Microorganism; Tetrahymena pyriformis; Mycobacterium; Tetrahymena; Ecology","score_opus":0.008291191113284918,"score_gpt":0.24710437555355005,"score_spread":0.23881318444026514,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2767367126","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99056584,0.00026395754,0.00017287211,0.007970998,0.00042240307,0.00019734708,0.000113195136,0.000009245575,0.00028414512],"genre_scores_gemma":[0.9970211,0.00013279481,0.00014636279,0.0015654002,0.0002379605,0.000015685362,0.00033470397,0.0000259631,0.0005200301],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99868184,0.00012263357,0.00026819878,0.00039991303,0.00006394377,0.00046346846],"domain_scores_gemma":[0.9987361,0.000027815817,0.00022851392,0.0008803722,0.000056333756,0.0000708811],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002991842,0.0002183626,0.00023769199,0.00003733353,0.00042582795,0.00007192656,0.00085845933,0.00019707174,0.000066365195],"category_scores_gemma":[0.000080187834,0.00015576911,0.0001349598,0.00003349058,0.00083347544,0.000010653086,0.00041577747,0.00021331989,0.00004095026],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006169822,0.000023975861,0.0071881167,0.000022042468,0.00009189238,0.0000049229907,0.00010864027,7.3099926e-7,0.9345594,0.000004542986,0.056655254,0.0012787958],"study_design_scores_gemma":[0.00065758394,0.0001109127,0.008377321,0.000022111086,0.000016535352,0.0000576442,0.000044420784,0.000004075003,0.8909939,0.000010193572,0.09947843,0.00022687319],"about_ca_topic_score_codex":0.0002667054,"about_ca_topic_score_gemma":0.000058329937,"teacher_disagreement_score":0.043565493,"about_ca_system_score_codex":0.000021145304,"about_ca_system_score_gemma":0.000047037556,"threshold_uncertainty_score":0.635208},"labels":[],"label_agreement":null},{"id":"W2770086925","doi":"10.1093/femsle/fnx248","title":"Bacillus amyloliquefaciens ssp. plantarum F11 isolated from Algerian salty lake as a source of biosurfactants and bioactive lipopeptides","year":2017,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Bacterial biofilms and quorum sensing","field":"Biochemistry, Genetics and Molecular Biology","cited_by":21,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"Natural Sciences and Engineering Research Council of Canada; University of Alberta; Alberta Innovates; Agence Universitaire de la Francophonie; Alberta Innovates - Health Solutions; Alberta Innovates - Technology Futures","keywords":"Surfactin; Bacillus amyloliquefaciens; Lipopeptide; Strain (injury); Whole genome sequencing; Microbiology; Biology; Bacteria; Genome; Chemistry; Bacillus subtilis; Biochemistry; Gene; Genetics","score_opus":0.007291593510924844,"score_gpt":0.21520627933606193,"score_spread":0.20791468582513709,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2770086925","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99690396,0.00016331676,0.000050490118,0.0013186566,0.00046941193,0.0001769969,0.0008046392,0.000018433739,0.000094098345],"genre_scores_gemma":[0.99688184,0.00013524292,0.00048717015,0.0014618088,0.00018624488,0.0000020444115,0.000723839,0.000029421253,0.00009235647],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9985702,0.00009836011,0.00029004007,0.0005775342,0.00003558692,0.00042830405],"domain_scores_gemma":[0.9988794,0.000024256915,0.0003657486,0.00058041856,0.00004904344,0.000101143916],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00012704123,0.0002887614,0.00037247976,0.00005016271,0.00028855077,0.000065266264,0.00029440704,0.00037443274,0.000040804178],"category_scores_gemma":[0.00007184052,0.00026179673,0.000099945835,0.000028644024,0.00073156477,0.000013049812,0.00028810988,0.00015396741,0.00002205296],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00043231455,0.000025964966,0.007326717,0.000006150987,0.00020790666,0.000014624194,0.00015851845,0.0000013406425,0.9896153,0.00000200427,0.0008888508,0.0013202776],"study_design_scores_gemma":[0.00092178985,0.0003058444,0.020546118,0.00004219108,0.000041866977,0.00013525515,0.00006620733,0.0000054108564,0.94560236,0.00000445257,0.0319646,0.00036392297],"about_ca_topic_score_codex":0.0013822896,"about_ca_topic_score_gemma":0.0008620753,"teacher_disagreement_score":0.044012986,"about_ca_system_score_codex":0.000011070925,"about_ca_system_score_gemma":0.00004150131,"threshold_uncertainty_score":0.99998343},"labels":[],"label_agreement":null},{"id":"W2789250540","doi":"10.1093/femsle/fny069","title":"Community-led comparative genomic and phenotypic analysis of the aquaculture pathogen Pseudomonas baetica a390T sequenced by Ion semiconductor and Nanopore technologies","year":2018,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Genomics and Phylogenetic Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":18,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"Fundação para a Ciência e a Tecnologia; Directorate for Biological Sciences; Industrial Biotechnology Innovation Centre; Vlaamse regering; Chief Scientist Office; Evelyn Trust; Biotechnology and Biological Sciences Research Council; Rosetrees Trust; Fonds Wetenschappelijk Onderzoek; University of Strathclyde","keywords":"Ion semiconductor sequencing; Biology; Genome; Phylogenetic tree; Strain (injury); Nanopore sequencing; Clade; Genetics; Evolutionary biology; DNA sequencing; Gene","score_opus":0.011540113357089562,"score_gpt":0.22908238742256926,"score_spread":0.21754227406547968,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2789250540","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99597,0.0022784902,0.000021305787,0.001006018,0.000088336026,0.0002099865,0.00038818913,0.000007332684,0.00003031886],"genre_scores_gemma":[0.9984799,0.00018578391,0.0003672118,0.0007009531,0.000026935706,0.000012081336,0.00018338586,0.000009731647,0.000034041113],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99900514,0.00021399962,0.0002176524,0.00031865167,0.000025460711,0.00021909866],"domain_scores_gemma":[0.9993145,0.00003188677,0.00016363517,0.00039798283,0.00006828932,0.000023740191],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001476414,0.00020886256,0.00035508495,0.000059554095,0.0002590006,0.00001197859,0.0003006769,0.00020770269,0.0000037626319],"category_scores_gemma":[0.000026794776,0.00014760095,0.00008523579,0.00016696184,0.0017100488,0.0000011761157,0.00041771802,0.0001712592,0.0000010473647],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00003367919,0.000018663412,0.013332185,0.0000065789677,0.00074796594,2.0285496e-7,0.0010159501,0.000003966868,0.98299104,0.0000146845505,0.0017485752,0.000086480155],"study_design_scores_gemma":[0.00042446543,0.00021401608,0.022746932,0.000008625252,0.00034871674,0.00002030953,0.0013010083,0.00000872023,0.9688873,0.00004940743,0.0057555954,0.00023487688],"about_ca_topic_score_codex":0.00005933686,"about_ca_topic_score_gemma":0.00013646435,"teacher_disagreement_score":0.0141037395,"about_ca_system_score_codex":0.000013105756,"about_ca_system_score_gemma":0.000016332311,"threshold_uncertainty_score":0.6300746},"labels":[],"label_agreement":null},{"id":"W2791561244","doi":"10.1093/femsle/fny026","title":"Diversification of Pseudomonas aeruginosa within the cystic fibrosis lung and its effects on antibiotic resistance","year":2018,"lang":"en","type":"review","venue":"FEMS Microbiology Letters","topic":"Cystic Fibrosis Research Advances","field":"Medicine","cited_by":34,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Toronto General Hospital; Canada Research Chairs; University Health Network","funders":"Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research","keywords":"Pseudomonas aeruginosa; Cystic fibrosis; Antibiotic resistance; Biology; Antibiotics; Microbiology; Antimicrobial; Genetic diversity; Bacteria; Genetics; Medicine; Population","score_opus":0.018162336944755338,"score_gpt":0.29856214535047637,"score_spread":0.28039980840572104,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2791561244","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.012804064,0.9835842,0.000046055473,0.0008118171,0.00043009233,0.0020460505,0.0002041098,0.00003708291,0.000036485377],"genre_scores_gemma":[0.007308432,0.9887654,0.0019046621,0.0006570358,0.00035551848,0.000057964444,0.0005122749,0.000077028126,0.0003616679],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9976227,0.00054289453,0.00056043087,0.0006970012,0.00015924472,0.0004177035],"domain_scores_gemma":[0.9967684,0.0018126984,0.0005759307,0.00064806244,0.00009808375,0.000096817384],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00048384952,0.0004396194,0.0014079963,0.00026636967,0.00016013795,0.000019336383,0.0003647585,0.00029244495,0.000010643571],"category_scores_gemma":[0.00077849464,0.00027496959,0.00025071224,0.0003537901,0.0007336568,0.00004337046,0.00014791837,0.0005557651,0.00009636403],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0010910055,0.00019510032,0.0001972069,0.14687325,0.0018478041,0.00017347235,0.00042190237,0.0000022074587,0.7409786,0.00027834516,0.05540754,0.052533578],"study_design_scores_gemma":[0.001848719,0.0011670039,0.000665244,0.09557968,0.0032048007,0.00055929006,0.000028191609,0.000011686469,0.017907515,0.000008551373,0.87812227,0.0008970394],"about_ca_topic_score_codex":0.0000067007536,"about_ca_topic_score_gemma":0.000004795326,"teacher_disagreement_score":0.82271475,"about_ca_system_score_codex":0.00018605475,"about_ca_system_score_gemma":0.000121528356,"threshold_uncertainty_score":0.99997026},"labels":[],"label_agreement":null},{"id":"W2803179918","doi":"10.1093/femsle/fny119","title":"Toluene degradation by Cupriavidus metallidurans CH34 in nitrate-reducing conditions and in Bioelectrochemical Systems","year":2018,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Microbial Fuel Cells and Bioremediation","field":"Environmental Science","cited_by":40,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"University of Winnipeg","keywords":"Toluene; Bioremediation; Biodegradation; Electron acceptor; Chemistry; Bioreactor; Nitrate; Degradation (telecommunications); Cometabolism; Environmental chemistry; Contamination; Biochemistry; Organic chemistry; Biology; Ecology","score_opus":0.005575935245974729,"score_gpt":0.20144745862696375,"score_spread":0.19587152338098904,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2803179918","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9980886,0.00010783446,0.000121764395,0.0011112,0.00018874349,0.00023325528,0.00003818666,0.000016322054,0.00009408529],"genre_scores_gemma":[0.99850726,0.000034768582,0.00015543684,0.00083280844,0.00005284576,0.00001480015,0.0003408747,0.000008783817,0.00005244029],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9989265,0.00009259899,0.00025891908,0.0003518856,0.000031174608,0.00033887255],"domain_scores_gemma":[0.9997472,0.000033355376,0.00006995807,0.00010133841,0.000004851919,0.000043299835],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00020656959,0.00013369977,0.00016404381,0.00007145443,0.0000609414,0.000023310975,0.000110541485,0.00013146421,0.00021588964],"category_scores_gemma":[0.000013637754,0.00012530701,0.000021035967,0.00022395034,0.00032900725,0.00011466446,0.000041345396,0.00014423126,0.00009942162],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000015453477,0.00003204269,0.012693835,0.0000048574652,0.000005053762,0.0000026834905,0.00014085311,0.000031947377,0.9806788,0.0000034204695,0.006333912,0.000057130117],"study_design_scores_gemma":[0.0010739962,0.00010306158,0.015224039,0.00004205763,0.000018398996,0.00008687154,0.00008244693,0.00037633447,0.97603214,0.000020180702,0.0065313056,0.0004091564],"about_ca_topic_score_codex":0.0019686304,"about_ca_topic_score_gemma":0.0011577504,"teacher_disagreement_score":0.004646659,"about_ca_system_score_codex":0.0001723945,"about_ca_system_score_gemma":0.000006209373,"threshold_uncertainty_score":0.51098716},"labels":[],"label_agreement":null},{"id":"W2808161540","doi":"10.1093/femsle/fny120","title":"Genomic characterisation of an international Pseudomonas aeruginosa reference panel indicates that the two major groups draw upon distinct mobile gene pools","year":2018,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Genomics and Phylogenetic Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":74,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Simon Fraser University","funders":"Medical Research Council; Cystic Fibrosis Trust","keywords":"Biology; Pseudomonas aeruginosa; Context (archaeology); Prophage; Mobile genetic elements; Genome; Phylogenetic tree; Genetics; Gene; Clade; Phylogenetics; Population; Microbiology; Computational biology; Bacteria; Medicine; Escherichia coli","score_opus":0.017076200344181808,"score_gpt":0.2416967786038183,"score_spread":0.2246205782596365,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2808161540","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9979268,0.00018766681,0.00017026288,0.0004981309,0.00055019156,0.00028620753,0.00030336005,0.0000064832916,0.00007090793],"genre_scores_gemma":[0.99650246,0.000108211025,0.00051903323,0.0011001129,0.0005841582,0.00005650191,0.0010726516,0.000021354059,0.00003549301],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.998841,0.00011676513,0.0002733351,0.00044272412,0.000048891314,0.00027727004],"domain_scores_gemma":[0.9991906,0.0000258948,0.00026476654,0.00040510774,0.00007317702,0.000040443403],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00020565931,0.0002109793,0.00019708747,0.000051369432,0.00015999518,0.000024516621,0.000549694,0.00012488646,0.00003797101],"category_scores_gemma":[0.000015472846,0.00016296438,0.00007791132,0.000043568944,0.00047678535,0.000003507372,0.00025184275,0.00010479591,0.00002631237],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009921804,0.000038869,0.028462566,0.0000033316849,0.00015346568,0.0000013351942,0.00026373795,0.0000093285435,0.96977776,0.000020871652,0.00019067287,0.0009788544],"study_design_scores_gemma":[0.00052553153,0.00027087692,0.24680342,0.0000051922566,0.00003276856,0.00006848672,0.00007168838,0.000008878257,0.7416461,0.00002832178,0.010328219,0.00021052369],"about_ca_topic_score_codex":0.00008950271,"about_ca_topic_score_gemma":0.000090647096,"teacher_disagreement_score":0.22813167,"about_ca_system_score_codex":0.00002292118,"about_ca_system_score_gemma":0.000028626577,"threshold_uncertainty_score":0.66454947},"labels":[],"label_agreement":null},{"id":"W2810899831","doi":"10.1093/femsle/fny144","title":"Bioplastic reservoir of diverse bacterial communities revealed along altitude gradient of Pangi-Chamba trans-Himalayan region","year":2018,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"biodegradable polymer synthesis and properties","field":"Materials Science","cited_by":39,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"CSIR - Institute of Himalayan Bioresource Technology; Science and Engineering Research Board; Public Health Agency of Canada","keywords":"Biology; Firmicutes; Actinobacteria; Bacteroidetes; Proteobacteria; Polyhydroxyalkanoates; Bioplastic; Bacteria; Phylogenetic tree; 16S ribosomal RNA; Extreme environment; Ecology; Horizontal gene transfer; Zoology; Gene; Genetics","score_opus":0.031879543171575986,"score_gpt":0.2199960098057794,"score_spread":0.18811646663420342,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2810899831","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9965521,0.0006107272,0.00014370237,0.001071514,0.0011694205,0.0001660738,0.00020213763,0.000038374506,0.000045946857],"genre_scores_gemma":[0.99874973,0.000053671843,0.00055012427,0.0003643694,0.00015378946,0.000008843382,0.00005452325,0.000019375626,0.000045584235],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9982802,0.00044693903,0.00053034304,0.0002561109,0.00007512048,0.0004112491],"domain_scores_gemma":[0.9988902,0.00016500858,0.0003048436,0.0004970484,0.00009022117,0.000052646737],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00038041102,0.00022852106,0.0005014663,0.00014759284,0.0001914037,0.00001793924,0.00052980764,0.00015368787,0.00040360962],"category_scores_gemma":[0.000026746746,0.0001795108,0.00012832809,0.00011086838,0.0018790888,0.000115085626,0.00014460986,0.00011483749,0.00004309833],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0004562172,0.000065470944,0.004687086,0.00007775411,0.00005023574,0.000004939991,0.003385347,0.0000014540137,0.98849994,0.00003386514,0.0025458587,0.00019185718],"study_design_scores_gemma":[0.0005575439,0.00036420193,0.00275085,0.00018758953,0.000055901186,0.00004921131,0.0005996354,0.000004799176,0.99248266,0.000007790579,0.0027205,0.00021932913],"about_ca_topic_score_codex":0.0027884522,"about_ca_topic_score_gemma":0.00093070767,"teacher_disagreement_score":0.003982734,"about_ca_system_score_codex":0.000029181618,"about_ca_system_score_gemma":0.000033940523,"threshold_uncertainty_score":0.7320238},"labels":[],"label_agreement":null},{"id":"W2811164392","doi":"10.1093/femsle/fny155","title":"A new approach to study attached biofilms and floating communities from Pseudomonas aeruginosa strains of various origins reveals diverse effects of divalent ions","year":2018,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Bacterial biofilms and quorum sensing","field":"Biochemistry, Genetics and Molecular Biology","cited_by":14,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Université Laval; Institut universitaire de cardiologie et de pneumologie de Québec","funders":"University of the Sunshine Coast","keywords":"Biofilm; Pseudomonas aeruginosa; Microbiology; Strain (injury); Chemistry; Bacteria; Biology; Cystic fibrosis; Antibiotics; Pseudomonadaceae; Genetics","score_opus":0.01563471294232301,"score_gpt":0.24472840741945195,"score_spread":0.22909369447712893,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2811164392","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.998013,0.00008022632,0.00072167267,0.00013316653,0.00031425245,0.00050654117,0.00017873273,0.000012148615,0.000040219817],"genre_scores_gemma":[0.9871331,0.000011469021,0.011733826,0.0006044855,0.00022284279,0.000004227778,0.0002515196,0.000019322079,0.000019217363],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9987349,0.00025308636,0.00032743736,0.00034854983,0.00004404774,0.00029197038],"domain_scores_gemma":[0.9991616,0.000056287266,0.00018469465,0.00044821575,0.000058288322,0.00009092176],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00016406419,0.00023053424,0.00039222007,0.00007809737,0.00013168114,0.000014508193,0.00023723241,0.00016796691,0.000011687898],"category_scores_gemma":[0.000038528076,0.00021332745,0.00007880629,0.00009461019,0.00032334673,0.0000047801564,0.0003408304,0.00011481177,0.0000039523784],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008606221,0.00016210489,0.0150427995,0.000023233859,0.00026306632,0.00000243085,0.00343562,0.0000033247877,0.9794754,0.000013755387,0.00085352105,0.0006387162],"study_design_scores_gemma":[0.001666054,0.0009840662,0.03786095,0.000061865205,0.00013445785,0.00002230303,0.001576879,0.000003304805,0.95678115,0.0000031551162,0.000591137,0.00031470304],"about_ca_topic_score_codex":0.002947138,"about_ca_topic_score_gemma":0.0002146307,"teacher_disagreement_score":0.02281815,"about_ca_system_score_codex":0.000015041934,"about_ca_system_score_gemma":0.000031236144,"threshold_uncertainty_score":0.8699241},"labels":[],"label_agreement":null},{"id":"W2887149460","doi":"10.1093/femsle/fny192","title":"Small extracellular particles with big potential for horizontal gene transfer: membrane vesicles and gene transfer agents","year":2018,"lang":"en","type":"review","venue":"FEMS Microbiology Letters","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":40,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Memorial University of Newfoundland","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Horizontal gene transfer; Biogenesis; Extracellular; Gene transfer; Extracellular vesicles; Gene; Bacteria; Cell biology; Vesicle; Biology; Chemistry; Membrane; Biophysics; Genetics; Genome","score_opus":0.037349927673586886,"score_gpt":0.23808672736543784,"score_spread":0.20073679969185096,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2887149460","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.4138987,0.57980114,0.0023155578,0.00015019254,0.0016747554,0.0011388389,0.0009376453,0.00008142222,0.0000017469862],"genre_scores_gemma":[0.01077614,0.9816537,0.0005065401,0.00024748818,0.0011558628,0.00044719147,0.004744111,0.0001965798,0.00027237227],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9968959,0.0004176134,0.0007864014,0.0010166325,0.000012726806,0.00087073026],"domain_scores_gemma":[0.9991852,0.0001268658,0.00012659632,0.00042864526,0.00006765906,0.00006500405],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0002747335,0.0008264942,0.0017509626,0.00024701483,0.00041992377,0.000055658358,0.00034332543,0.0010669023,0.00015240528],"category_scores_gemma":[0.000007930029,0.00061868265,0.00053952605,0.00015235879,0.00066506275,0.00006480659,0.000054984168,0.0004438629,0.00011487792],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00026726545,0.000103654624,0.0000067731567,0.0009223962,0.0015645708,0.00001501189,0.000094510535,6.387655e-7,0.9066086,0.00001650794,0.0006296172,0.089770466],"study_design_scores_gemma":[0.002512251,0.00076222315,0.000014413764,0.0006092775,0.0021672787,0.0023644709,0.0000144495425,3.6220345e-7,0.12614097,0.0000026374705,0.8645888,0.00082284753],"about_ca_topic_score_codex":0.00008977792,"about_ca_topic_score_gemma":0.00012374044,"teacher_disagreement_score":0.8639592,"about_ca_system_score_codex":0.00005032943,"about_ca_system_score_gemma":0.000092116985,"threshold_uncertainty_score":0.99962646},"labels":[],"label_agreement":null},{"id":"W2896829387","doi":"10.1093/femsle/fny250","title":"Streptomyces protein secretion and its application in biotechnology","year":2018,"lang":"en","type":"review","venue":"FEMS Microbiology Letters","topic":"Biochemical and Molecular Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":28,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Environment and Climate Change Canada","keywords":"Secretion; Bacteria; Heterologous; Downstream processing; Biology; Secretory protein; Proteases; Streptomyces; Recombinant DNA; Biochemistry; Inclusion bodies; Protein biosynthesis; Microbiology; Enzyme; Gene","score_opus":0.013892602043266545,"score_gpt":0.2829079970276894,"score_spread":0.26901539498442284,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2896829387","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.068487555,0.92956895,0.00013977985,0.0003921244,0.000059204354,0.0012298246,0.00007180935,0.000022814012,0.000027951904],"genre_scores_gemma":[0.0029799514,0.99352866,0.00015120006,0.00027695225,0.00020449913,0.00043756515,0.0022534295,0.00005139322,0.00011632997],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9980202,0.000203102,0.00037486115,0.00092688616,0.000040236406,0.00043472074],"domain_scores_gemma":[0.999308,0.000011213991,0.00017829803,0.00040955513,0.000032524928,0.000060412778],"candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.00021760639,0.00035818288,0.00059331534,0.00020882797,0.000049416354,0.000013634164,0.00038508282,0.0013149863,0.0000065598365],"category_scores_gemma":[0.000061707084,0.00031203596,0.0001477734,0.00019981731,0.00035990152,0.0000023427044,0.00038034082,0.0004172876,0.00006687169],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000013270352,0.000024614017,0.0000044781414,0.0011574831,0.000060226863,0.000005149346,0.0000032060836,2.7240736e-8,0.93421245,0.000026973341,0.00075599184,0.063736156],"study_design_scores_gemma":[0.00020212561,0.00011982841,0.0000014292784,0.0006653836,0.00003358496,0.00011127276,0.0000023280877,0.0000010743312,0.09661463,0.000008302246,0.9019111,0.0003289893],"about_ca_topic_score_codex":0.000014281264,"about_ca_topic_score_gemma":0.000024587574,"teacher_disagreement_score":0.90115505,"about_ca_system_score_codex":0.00003839513,"about_ca_system_score_gemma":0.0000711467,"threshold_uncertainty_score":0.9999815},"labels":[],"label_agreement":null},{"id":"W2904785470","doi":"10.1093/femsle/fny285","title":"Decoding the ocean's microbiological secrets for marine enzyme biodiscovery","year":2018,"lang":"en","type":"review","venue":"FEMS Microbiology Letters","topic":"Microbial Community Ecology and Physiology","field":"Environmental Science","cited_by":85,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Ministerio de Asuntos Económicos y Transformación Digital, Gobierno de España; Fundação para a Ciência e a Tecnologia; ERAB: The European Foundation for Alcohol Research; European Commission; Ministerio de Ciencia, Innovación y Universidades","keywords":"Abundance (ecology); Seawater; Ecology; Population; Microbial population biology; Biology; Marine life; Microbial ecology; Oceanography; Biodiversity; Marine bacteriophage; Environmental science; Bacteria; Geology","score_opus":0.03597131656028852,"score_gpt":0.2761654170492052,"score_spread":0.2401941004889167,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2904785470","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0199073,0.9656829,0.00027187428,0.0019373763,0.0046158475,0.004678815,0.0017465868,0.00023296305,0.00092632265],"genre_scores_gemma":[0.00027860855,0.9777704,0.0010571,0.011978225,0.0008322336,0.00011612201,0.0070645944,0.00011289641,0.00078980584],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9958015,0.0012652647,0.0008066827,0.0010073199,0.000033856413,0.0010853529],"domain_scores_gemma":[0.9967466,0.0015091856,0.000611785,0.0010307736,0.000014146908,0.00008750035],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00091089413,0.00081280817,0.0016758617,0.00009807234,0.0008714451,0.000044624692,0.002130977,0.0011516974,0.0045356005],"category_scores_gemma":[0.00012468125,0.00051210995,0.0009069942,0.00026893878,0.002662938,0.000079246725,0.0021199866,0.0011265626,0.002316175],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008659257,0.00012396065,0.00008774798,0.00076234265,0.0005065504,0.000016130032,0.00015142508,0.000009709744,0.041078288,0.000032765543,0.9195206,0.037623867],"study_design_scores_gemma":[0.0002583161,0.00017578775,0.000012944257,0.00024512413,0.00030686293,0.00038807752,0.000007734593,0.0000011028548,0.00016124366,0.00008262362,0.9977454,0.00061480195],"about_ca_topic_score_codex":0.000068792084,"about_ca_topic_score_gemma":0.00020173311,"teacher_disagreement_score":0.078224756,"about_ca_system_score_codex":0.00030021174,"about_ca_system_score_gemma":0.000053762506,"threshold_uncertainty_score":0.99973303},"labels":[],"label_agreement":null},{"id":"W2936911327","doi":"10.1093/femsle/fnz067","title":"Detection of fecal bacteria and antibiotic resistance genes in drinking water collected from three First Nations communities in Manitoba, Canada","year":2019,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Pharmaceutical and Antibiotic Environmental Impacts","field":"Environmental Science","cited_by":18,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of Manitoba","funders":"Collaborative Research Based on Industrial Demand; Agriculture and Agri-Food Canada; Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research; Canadian Network for Research and Innovation in Machining Technology, Natural Sciences and Engineering Research Council of Canada","keywords":"Fecal coliform; Water quality; Antibiotic resistance; Biology; Feces; Water treatment; Microbiology; Bacteria; Antibiotics; Environmental science; Ecology; Environmental engineering","score_opus":0.011382248177666473,"score_gpt":0.19065434900805966,"score_spread":0.1792721008303932,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2936911327","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99894536,0.000050760053,0.00000822237,0.00054095854,0.00013487737,0.00017431585,0.000029824003,0.000005260503,0.00011043513],"genre_scores_gemma":[0.9992984,0.00003674438,0.00009999952,0.00047876703,0.000006442051,0.0000010875971,0.000048520742,0.0000070572005,0.000022967823],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99928707,0.00007467318,0.00018980124,0.00016282905,0.000040669565,0.00024498234],"domain_scores_gemma":[0.99969697,0.000117622505,0.000039570645,0.00011479489,0.0000012367985,0.000029807712],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00007338882,0.000107168096,0.00016050028,0.000050814408,0.000074938995,0.000008479097,0.000120136996,0.000058224654,0.00022389033],"category_scores_gemma":[0.0000051588986,0.00009043686,0.000013765361,0.000100314355,0.00023848984,0.000075560834,0.00013567274,0.00013053743,0.000021145463],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000015546844,0.000015172463,0.43063706,0.000006788485,0.0000044109797,0.0000039609813,0.00011297092,0.00009578559,0.56904256,3.9897748e-7,0.000018969382,0.00004637973],"study_design_scores_gemma":[0.0004036572,0.000012394401,0.7473998,0.000057558485,0.00000384053,0.0000041452367,0.00010510823,0.00007185101,0.25105995,0.000007091511,0.0007706086,0.00010397156],"about_ca_topic_score_codex":0.33081308,"about_ca_topic_score_gemma":0.99107325,"teacher_disagreement_score":0.66026014,"about_ca_system_score_codex":0.00025518273,"about_ca_system_score_gemma":0.000005396163,"threshold_uncertainty_score":0.6736431},"labels":[],"label_agreement":null},{"id":"W2944289826","doi":"10.1093/femsle/fnz096","title":"The origin of aerobic methanotrophy within the Proteobacteria","year":2019,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Microbial metabolism and enzyme function","field":"Biochemistry, Genetics and Molecular Biology","cited_by":24,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"Natural Sciences and Engineering Research Council of Canada; U.S. Department of Energy; National Science Foundation","keywords":"Methane monooxygenase; Monooxygenase; Methanotroph; Methanol dehydrogenase; Biology; Methane; Gene; Anaerobic oxidation of methane; Rhodospirillaceae; Biochemistry; Chemistry; Ecology; Cytochrome P450; Enzyme","score_opus":0.005675301746993169,"score_gpt":0.2020072165965089,"score_spread":0.19633191484951573,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2944289826","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9954701,0.00043451684,0.00020328819,0.0015005397,0.001842472,0.0004414265,0.000032905868,0.000009197243,0.00006557089],"genre_scores_gemma":[0.99554056,0.00005467315,0.0003313574,0.002607987,0.0003297975,0.00003275865,0.00012958192,0.000023098873,0.0009501991],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9989594,0.00021245975,0.00025778727,0.00028331726,0.000033120003,0.0002538887],"domain_scores_gemma":[0.9991629,0.00002854544,0.00019541885,0.0005469387,0.00004394843,0.000022260987],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00036381593,0.00016045326,0.00016821064,0.000023238497,0.00011979003,0.000014389447,0.00038657885,0.00013653404,0.000031722142],"category_scores_gemma":[0.000036112604,0.00008842756,0.000113791444,0.00009038706,0.00026936803,0.0000034962954,0.00011048978,0.00014838032,0.00009673504],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014586082,0.000010492573,0.0005346575,0.0000071073337,0.0000740493,2.6827342e-7,0.00004402992,0.000042616583,0.9820054,0.0001308764,0.016858805,0.00014579507],"study_design_scores_gemma":[0.00032221383,0.00009861346,0.00079390034,0.0000062855506,0.000017612325,0.000026755104,0.000027841967,0.0000011960295,0.72522545,0.0000088791085,0.2733618,0.00010944649],"about_ca_topic_score_codex":0.000038630722,"about_ca_topic_score_gemma":0.000024093797,"teacher_disagreement_score":0.25678,"about_ca_system_score_codex":0.000008407101,"about_ca_system_score_gemma":0.00003802825,"threshold_uncertainty_score":0.3605971},"labels":[],"label_agreement":null},{"id":"W2951284580","doi":"10.1093/femsle/fnz141","title":"#EUROmicroMOOC: using Twitter to share trends in Microbiology worldwide","year":2019,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Social Media in Health Education","field":"Social Sciences","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Microbiology; Clinical microbiology; Data science; Biology; Computational biology; Computer science","score_opus":0.07384411494197415,"score_gpt":0.3630327647854522,"score_spread":0.28918864984347803,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2951284580","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.95630926,0.0000705741,0.000010660504,0.034092262,0.0080837365,0.00085923175,0.00003402592,0.0000651298,0.00047510827],"genre_scores_gemma":[0.9715434,0.000005752237,0.0013268259,0.025506387,0.00086752465,0.00012269597,0.00016243171,0.00003850547,0.00042652895],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9972937,0.00063064724,0.00042758562,0.00060230197,0.000049626775,0.0009961233],"domain_scores_gemma":[0.99879056,0.00054925337,0.00015546511,0.00029901406,0.00005083294,0.00015489881],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00065695914,0.00021633769,0.0003914687,0.0006637395,0.00019611166,0.000033395325,0.00048242026,0.0003226584,0.0013933686],"category_scores_gemma":[0.00024796597,0.00024011206,0.000090224945,0.00094982545,0.00027939546,0.00010939651,0.00009371244,0.00038232398,0.0011429971],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00002520449,0.00003197606,0.092544705,0.0000072013536,0.000011265844,0.0000062146732,0.015373107,0.00002298926,0.87387687,0.000029917861,0.016881283,0.0011892789],"study_design_scores_gemma":[0.0014429492,0.00012931087,0.107657745,0.0001791199,0.00002871482,0.00004913349,0.003343117,0.0000044319195,0.007346716,0.00003603824,0.87867856,0.0011041452],"about_ca_topic_score_codex":0.0060633942,"about_ca_topic_score_gemma":0.003550901,"teacher_disagreement_score":0.8665301,"about_ca_system_score_codex":0.0007464028,"about_ca_system_score_gemma":0.00016989058,"threshold_uncertainty_score":0.99963474},"labels":[],"label_agreement":null},{"id":"W2955914058","doi":"10.1093/femsle/fnz130","title":"Editorial: Microbial food and feed ingredients – reconciling tradition and novelty","year":2019,"lang":"en","type":"editorial","venue":"FEMS Microbiology Letters","topic":"Probiotics and Fermented Foods","field":"Agricultural and Biological Sciences","cited_by":14,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph; Canadian Institute for Public Safety Research and Treatment","funders":"","keywords":"Novelty; Novel food; Food science; Biology; Philosophy","score_opus":0.009009352546530425,"score_gpt":0.1893519823429764,"score_spread":0.18034262979644597,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2955914058","genre_codex":"editorial","genre_gemma":"editorial","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"editorial","genre_consensus":"editorial","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.38339245,0.000205176,9.700632e-7,0.0005709361,0.6136493,0.00028212438,0.0018365682,0.00004357688,0.000018894918],"genre_scores_gemma":[0.033501938,0.00020717083,0.000059263137,0.0005619576,0.9606987,0.0000114830455,0.004886795,0.000007369678,0.00006532353],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9979362,0.00011929625,0.00040678002,0.000894038,0.00012093546,0.0005227501],"domain_scores_gemma":[0.9989126,0.0004809387,0.00030275554,0.00009945252,0.00009516817,0.00010914184],"candidate_categories":["research_integrity"],"consensus_categories":[],"category_scores_codex":[0.0003686016,0.00045511714,0.000580215,0.000043713866,0.00023858316,0.0001376159,0.00030213615,0.0015095721,0.000021786629],"category_scores_gemma":[0.00012222485,0.00022715156,0.000116800715,0.000110960915,0.00026569437,0.00010116474,0.00020659983,0.0009191715,0.000021688405],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000413075,0.000018376308,0.000032682292,0.000018261351,0.00005100126,8.160881e-7,0.000029276482,1.3491835e-7,0.4857682,0.0000016499071,0.5134259,0.0006124171],"study_design_scores_gemma":[0.000769975,0.0006906117,0.00021315177,0.00012286876,0.000064977685,0.000016192962,0.000030878,0.000001563515,0.0018283424,0.000021078136,0.9956936,0.0005467506],"about_ca_topic_score_codex":0.00009009667,"about_ca_topic_score_gemma":0.00010311097,"teacher_disagreement_score":0.48393986,"about_ca_system_score_codex":0.000093654686,"about_ca_system_score_gemma":0.00003165507,"threshold_uncertainty_score":0.9997867},"labels":[],"label_agreement":null},{"id":"W2965217818","doi":"10.1093/femsle/fnz152","title":"Influence of 16S rRNA variable region on perceived diversity of marine microbial communities of the Northern North Atlantic","year":2019,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Microbial Community Ecology and Physiology","field":"Environmental Science","cited_by":82,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University","funders":"Natural Sciences and Engineering Research Council of Canada; Ocean Frontier Institute","keywords":"Biology; Archaea; Ecology; Photic zone; Beta diversity; 16S ribosomal RNA; Ribosomal RNA; Genetic diversity; Marine bacteriophage; Microbial population biology; Community structure; Bacteria; Phytoplankton; Biodiversity; Nutrient; Genetics; Population; Gene","score_opus":0.007285406110426933,"score_gpt":0.16840374134783972,"score_spread":0.16111833523741279,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2965217818","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9990065,0.0000017918532,0.0000030139533,0.00022674348,0.00013805369,0.00025788412,0.00004358948,0.000007987341,0.00031445097],"genre_scores_gemma":[0.9984215,0.000009945102,0.00005554406,0.001332859,0.000007212433,0.0000012388232,0.00008182894,0.000007954,0.00008192058],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99873054,0.00051691296,0.00030416722,0.0001626808,0.000043511838,0.00024219096],"domain_scores_gemma":[0.99866503,0.00023806626,0.00037185618,0.00067849713,0.000026633636,0.000019935589],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000160644,0.00016173517,0.00038128166,0.000046753637,0.00019868257,0.0000014257267,0.0010256395,0.00014728589,0.00068603316],"category_scores_gemma":[0.000016709102,0.00012816017,0.00010979288,0.00017138988,0.0013956759,0.00005480402,0.0017678315,0.00037548033,0.00007091694],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009820343,0.000064341366,0.49269634,0.00001830709,0.00002869112,3.5096195e-7,0.0010704892,0.0064095603,0.49913135,0.000008066269,0.00046752623,0.0000067573437],"study_design_scores_gemma":[0.0004983124,0.0002076607,0.99102736,0.000041609328,0.000028412116,0.000018000957,0.00008977524,0.0000056936888,0.0074808146,0.00003413181,0.0004367387,0.00013149869],"about_ca_topic_score_codex":0.015045565,"about_ca_topic_score_gemma":0.01561303,"teacher_disagreement_score":0.49833098,"about_ca_system_score_codex":0.00006176006,"about_ca_system_score_gemma":0.000015824558,"threshold_uncertainty_score":0.9915133},"labels":[],"label_agreement":null},{"id":"W2966191705","doi":"10.1093/femsle/fnz167","title":"Microbiomes in an acidic rock–water cave system","year":2019,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Metal Extraction and Bioleaching","field":"Engineering","cited_by":23,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Deutsche Forschungsgemeinschaft; Bundesministerium für Bildung und Frauen; Canada's Michael Smith Genome Sciences Centre","keywords":"Pyrite; Environmental chemistry; Cave; Mineralization (soil science); Ecosystem; Microorganism; Chemistry; Nutrient; Extreme environment; Phosphate minerals; Phosphate; Ecology; Geology; Mineralogy; Biology; Bacteria; Soil water","score_opus":0.005429473849069536,"score_gpt":0.18499312134118637,"score_spread":0.17956364749211684,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2966191705","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99705505,0.000102160986,0.00032276078,0.00021115864,0.0015146895,0.00018327925,0.000014156514,0.00025194653,0.0003447858],"genre_scores_gemma":[0.99864775,0.000003471389,0.00013497872,0.00078740483,0.00007902369,0.000007325203,0.00015119599,0.000029485467,0.00015936472],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99898994,0.00008136617,0.00025105625,0.0002583366,0.000021975024,0.0003973342],"domain_scores_gemma":[0.9996716,0.0000160938,0.000023865285,0.00023457606,0.000007997285,0.00004586458],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00016991116,0.00018949872,0.0002486478,0.0002024412,0.000030583786,0.00002693516,0.00017954013,0.00016444972,0.00014681241],"category_scores_gemma":[0.0000013680722,0.00014689231,0.00006237974,0.00007795495,0.0000268835,0.000131955,0.000029038576,0.00028638833,0.0018409758],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000007876511,0.000009374204,0.0022533187,0.00005526122,0.00002269481,0.000014029024,0.0002372095,0.0020821192,0.99438816,0.0000120929235,0.0007226479,0.00019521972],"study_design_scores_gemma":[0.0012401894,0.00007231421,0.0026217864,0.0001237973,0.000018506229,0.0004719476,0.00075422553,0.002709672,0.945013,0.0000014774762,0.04617045,0.00080262765],"about_ca_topic_score_codex":0.00004132061,"about_ca_topic_score_gemma":0.000034218338,"teacher_disagreement_score":0.04937515,"about_ca_system_score_codex":0.00012904435,"about_ca_system_score_gemma":0.0000031501404,"threshold_uncertainty_score":0.99893624},"labels":[],"label_agreement":null},{"id":"W2988418877","doi":"10.1093/femsle/fnz223","title":"Quorum sensing and the anaerobic regulator (ANR) control polyhydroxyalkanoate (PHA) production in<i>Pseudomonas chlororaphis</i>PA23","year":2019,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"biodegradable polymer synthesis and properties","field":"Materials Science","cited_by":13,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba","funders":"Natural Sciences and Engineering Research Council of Canada; Genome Canada","keywords":"Pseudomonas chlororaphis; Quorum sensing; Polyhydroxyalkanoates; Biology; Microbiology; Mutant; Pseudomonas; Pseudomonadales; Biochemistry; Gene; Bacteria; Virulence; Genetics","score_opus":0.0056150649880268464,"score_gpt":0.17486760490373218,"score_spread":0.16925253991570532,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2988418877","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9662573,0.004187263,0.00003174326,0.02737213,0.0015549766,0.00048307067,0.000017389117,0.00006185035,0.000034324672],"genre_scores_gemma":[0.9944189,0.00005936719,0.00019390431,0.0048618917,0.00014667168,0.00001332859,0.0000071553063,0.000025596564,0.0002731583],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.997938,0.00046344998,0.0003853679,0.00059351255,0.00006960611,0.0005500794],"domain_scores_gemma":[0.9991468,0.00013470354,0.00018867836,0.00045927416,0.000026010037,0.00004451155],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000949897,0.00026624926,0.00048174112,0.00012510068,0.00021649056,0.000078234356,0.00024101629,0.00014630327,0.00007305288],"category_scores_gemma":[0.000036717563,0.00016699848,0.00008310677,0.0001521151,0.0008693623,0.00016837136,0.000082169325,0.00021115982,0.00015818528],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00040268412,0.000015045104,0.0018095621,0.00001689919,0.000025640273,0.0000040504783,0.00039452364,0.000012436076,0.99521494,0.000051260504,0.00087658514,0.0011763454],"study_design_scores_gemma":[0.0018971523,0.00005058544,0.001460641,0.00007288403,0.000033374123,0.00018437467,0.00010817234,0.00010673624,0.99322146,0.00003786908,0.0025232811,0.00030343933],"about_ca_topic_score_codex":0.0007928986,"about_ca_topic_score_gemma":0.00015912548,"teacher_disagreement_score":0.028161673,"about_ca_system_score_codex":0.000040397787,"about_ca_system_score_gemma":0.000025958596,"threshold_uncertainty_score":0.681},"labels":[],"label_agreement":null},{"id":"W3006417466","doi":"10.1093/femsle/fnaa023","title":"3D biofilms: in search of the polysaccharides holding together lichen symbioses","year":2020,"lang":"en","type":"review","venue":"FEMS Microbiology Letters","topic":"Lichen and fungal ecology","field":"Agricultural and Biological Sciences","cited_by":70,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia, Okanagan Campus; University of British Columbia; University of Alberta","funders":"Natural Sciences and Engineering Research Council of Canada; Canada Foundation for Innovation","keywords":"Lichen; Polysaccharide; Biofilm; Biology; Symbiosis; Algae; Cyanobacteria; Extracellular matrix; Extracellular polysaccharide; Cell wall; Bacteria; Botany; Biochemistry; Paleontology","score_opus":0.03815752081436263,"score_gpt":0.2565642118089838,"score_spread":0.21840669099462118,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3006417466","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.09561362,0.89872867,1.4973405e-7,0.0039440473,0.0005227193,0.0007484064,0.00030025194,0.000039495822,0.00010263604],"genre_scores_gemma":[0.009881762,0.98505425,0.000059080725,0.004119698,0.00048345514,0.000059462232,0.00018592316,0.000008335295,0.0001480184],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9976824,0.000607716,0.0005884951,0.0005517914,0.000058624883,0.0005109527],"domain_scores_gemma":[0.99896765,0.0005224652,0.0002923493,0.00013952721,0.00002073726,0.000057274854],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00031009995,0.00036434273,0.0012512418,0.00004632991,0.00009426985,0.000021642707,0.0010647748,0.00054949016,0.00024028389],"category_scores_gemma":[0.00007102751,0.000117597934,0.00047151072,0.0006687692,0.0003526819,0.000037199625,0.00044088275,0.00070584315,0.000107510365],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00000869129,0.00005142663,0.0017414484,0.0004781406,0.0001342939,0.000016408641,0.00016122467,3.4600748e-7,0.6598833,0.00002551483,0.0020608592,0.33543834],"study_design_scores_gemma":[0.00008950561,0.000092060145,0.0007499532,0.0009927874,0.00010000753,0.000064061496,0.00005277976,4.758133e-7,0.001328444,0.000002612244,0.9961769,0.00035042374],"about_ca_topic_score_codex":0.0003569811,"about_ca_topic_score_gemma":0.00023760358,"teacher_disagreement_score":0.994116,"about_ca_system_score_codex":0.00007663862,"about_ca_system_score_gemma":0.00004403551,"threshold_uncertainty_score":0.47955048},"labels":[],"label_agreement":null},{"id":"W3021555428","doi":"10.1111/j.1574-6968.2002.tb11251.x","title":"Role of the<i>Pseudomonas aeruginosa las</i>and<i>rhl</i>quorum-sensing systems in<i>rhlI</i>regulation","year":2002,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Bacterial Genetics and Biotechnology","field":"Biochemistry, Genetics and Molecular Biology","cited_by":72,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba","funders":"Federation of European Microbiological Societies; National Institute for Health and Care Research; National Institutes of Health; Cystic Fibrosis Foundation","keywords":"Quorum sensing; Pseudomonas aeruginosa; Biology; Regulator; Population; Regulation of gene expression; Gene; Virulence; Cell biology; Genetics; Bacteria; Medicine","score_opus":0.00466159880881487,"score_gpt":0.16855996042474497,"score_spread":0.1638983616159301,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3021555428","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9947817,0.0025640004,0.000037461385,0.0016985504,0.00049238413,0.00026209062,0.00003190926,0.000013257149,0.00011869199],"genre_scores_gemma":[0.998257,0.00024022853,0.00023730265,0.0009729702,0.00014989713,0.000005357748,0.000042490607,0.000020085734,0.00007467415],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99874955,0.00013398893,0.0003443663,0.0003947363,0.000040004565,0.00033737684],"domain_scores_gemma":[0.99932253,0.000015663032,0.00018047681,0.00041457204,0.000035065295,0.00003171276],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013547232,0.00020001829,0.00025264962,0.00007773128,0.00006838699,0.0000150858,0.00023501301,0.00039043667,0.000007756343],"category_scores_gemma":[0.00002500698,0.00016421726,0.00008291398,0.00013570744,0.00038301453,0.0000033499705,0.00021060919,0.00016629155,0.00000769283],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000018624007,0.000023895025,0.0029683209,0.000011875262,0.000029125082,0.0000012109653,0.00004742216,0.000069841684,0.99411535,0.000045750552,0.0010785417,0.0015900556],"study_design_scores_gemma":[0.0006660447,0.00010698374,0.007719917,0.000045561996,0.000020522015,0.00017072799,0.000047731206,0.00015251496,0.91186476,0.000025860427,0.07890855,0.0002708318],"about_ca_topic_score_codex":0.000067008994,"about_ca_topic_score_gemma":0.00006532972,"teacher_disagreement_score":0.08225058,"about_ca_system_score_codex":0.000016243543,"about_ca_system_score_gemma":0.000010917073,"threshold_uncertainty_score":0.66965854},"labels":[],"label_agreement":null},{"id":"W3080451600","doi":"10.1093/femsle/fnaa135","title":"A toddler SHIME® model to study microbiota of young children","year":2020,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Gut microbiota and health","field":"Biochemistry, Genetics and Molecular Biology","cited_by":18,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph; Canadian Institute for Public Safety Research and Treatment","funders":"","keywords":"Gut flora; Biology; Feces; Toddler; Dysbiosis; Prebiotic; Physiology; Ascending colon; Food science; Microbiology; Medicine; Gastroenterology; Immunology; Psychology","score_opus":0.014547525455765938,"score_gpt":0.24582086020858837,"score_spread":0.23127333475282244,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3080451600","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99337757,0.00015104358,0.0016557217,0.0035866569,0.00013227561,0.00079709664,0.00022986061,0.000024498848,0.00004529777],"genre_scores_gemma":[0.9802177,0.000012149161,0.0022553303,0.016892878,0.0001763119,0.00001679489,0.0003179232,0.00004213616,0.00006875695],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9982544,0.00011129433,0.00041352934,0.0007066634,0.00003955961,0.00047455385],"domain_scores_gemma":[0.9991972,0.0000061870282,0.00013067432,0.00043514834,0.000056540306,0.00017425179],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00014410421,0.000286139,0.0003755422,0.0000704643,0.00008591731,0.000012393115,0.00048169878,0.0001955786,0.000033665274],"category_scores_gemma":[0.000027684371,0.00027956764,0.0001392118,0.00016337694,0.00010937314,0.0000034262393,0.00032702112,0.00018660046,0.000080201586],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015506384,0.00015153663,0.02175706,0.000010582918,0.0001618625,0.0000029435648,0.00082805497,0.0005661128,0.9498657,0.000003009746,0.026417878,0.000080214275],"study_design_scores_gemma":[0.0040188916,0.0023692807,0.061059106,0.000027090691,0.00014633372,0.00018464697,0.0002995022,0.000076607066,0.92511725,0.0000030293997,0.0055513866,0.001146863],"about_ca_topic_score_codex":0.00007040994,"about_ca_topic_score_gemma":0.00003196634,"teacher_disagreement_score":0.039302044,"about_ca_system_score_codex":0.000017770952,"about_ca_system_score_gemma":0.00006707587,"threshold_uncertainty_score":0.99996567},"labels":[],"label_agreement":null},{"id":"W3082406180","doi":"10.1093/femsle/fnaa147","title":"Impact of inter-amoebic phagocytosis on the <i>L. pneumophila</i> growth","year":2020,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Legionella and Acanthamoeba research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"Legionella pneumophila; Acanthamoeba; Biology; Microbiology; Amoeba (genus); Phagocytosis; Protozoa; Legionella; Bacteria; Genetics","score_opus":0.01711015082759851,"score_gpt":0.2533860744663246,"score_spread":0.2362759236387261,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3082406180","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9788626,0.000098278324,0.0001438988,0.02028701,0.0000871741,0.00017958132,0.00008407484,0.000010792766,0.00024658086],"genre_scores_gemma":[0.9859573,0.000058744357,0.000020438743,0.013511532,0.0002734503,0.00001210695,0.000110336776,0.000022003103,0.000034047487],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9989109,0.00015761913,0.00019571738,0.0003595849,0.00004548309,0.00033066777],"domain_scores_gemma":[0.99943393,0.000053016258,0.0000895453,0.00029100094,0.00005119299,0.000081330734],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000118082826,0.0001872585,0.00019580964,0.00003764655,0.00006913573,0.00001119272,0.00047263404,0.00012774207,0.000047434016],"category_scores_gemma":[0.00010355069,0.000117921336,0.00025937275,0.00013236138,0.00040340307,0.0000025773509,0.00017548054,0.00022332458,0.00007129041],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00017389096,0.000037270867,0.0045001064,0.000007536891,0.00014202422,0.0000055792652,0.00008536526,0.000015059346,0.9161865,0.000020589661,0.07873785,0.00008820206],"study_design_scores_gemma":[0.0005305363,0.0010352542,0.0015802977,0.000012512205,0.000014460239,0.000030166113,0.000035578334,0.0000089162695,0.99023557,0.000006844644,0.0063153603,0.00019451849],"about_ca_topic_score_codex":0.000047699,"about_ca_topic_score_gemma":0.0000024523254,"teacher_disagreement_score":0.07404903,"about_ca_system_score_codex":0.000018473022,"about_ca_system_score_gemma":0.000049469847,"threshold_uncertainty_score":0.48086923},"labels":[],"label_agreement":null},{"id":"W3090427828","doi":"10.1093/femsle/fnaa162","title":"Temperature-sensitive recombinant subtilisin protease variants that efficiently degrade molecular biology enzymes","year":2020,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Enzyme Production and Characterization","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Victoria","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Subtilisin; Recombinant DNA; Enzyme; Protease; Biochemistry; Biology; Alkaline protease; Chemistry; Computational biology; Gene","score_opus":0.01034454743781317,"score_gpt":0.22291105804806832,"score_spread":0.21256651061025517,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3090427828","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97882223,0.00032915908,0.0037600633,0.015737228,0.00070655753,0.00045686672,0.00009369732,0.000055988065,0.000038203176],"genre_scores_gemma":[0.9760117,0.000041306008,0.00058318814,0.021073125,0.00029685645,0.000030418765,0.0018206297,0.00003895303,0.00010380507],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99819666,0.0002991259,0.00024946805,0.0008035755,0.00004059223,0.00041058607],"domain_scores_gemma":[0.9993269,0.000010226645,0.00015179825,0.0003154918,0.00006844797,0.00012716591],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00013524751,0.00029290823,0.00026180956,0.00006159852,0.000116521565,0.000029886152,0.00022824734,0.00031636615,0.000030531482],"category_scores_gemma":[0.00011634681,0.00027102855,0.00012493509,0.00015316966,0.0002157599,0.000007281309,0.0001228861,0.00024061809,0.000061789404],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00016262576,0.000056422756,0.00097649166,0.000012574028,0.00008092104,0.000022850481,0.000120991586,0.000024055185,0.9912389,0.00009645598,0.0070429,0.00016482543],"study_design_scores_gemma":[0.00068450725,0.00022794366,0.0010253306,0.000010398183,0.000022219,0.000095210125,0.00004674664,0.000010429718,0.97509164,0.0000055066216,0.022461552,0.00031854687],"about_ca_topic_score_codex":0.000008046351,"about_ca_topic_score_gemma":0.0000018622605,"teacher_disagreement_score":0.016147276,"about_ca_system_score_codex":0.000019108998,"about_ca_system_score_gemma":0.00004791722,"threshold_uncertainty_score":0.9999742},"labels":[],"label_agreement":null},{"id":"W3093323682","doi":"10.1093/femsle/fnaa172","title":"Methanogenic archaea in peatlands","year":2020,"lang":"en","type":"review","venue":"FEMS Microbiology Letters","topic":"Methane Hydrates and Related Phenomena","field":"Environmental Science","cited_by":77,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Laurentian University","funders":"","keywords":"Peat; Methanogen; Methanogenesis; Archaea; Permafrost; Ecology; Environmental science; Thermokarst; Wetland; Methane; Biology; Bacteria","score_opus":0.02081017021598784,"score_gpt":0.2560378693743034,"score_spread":0.23522769915831554,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3093323682","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0004256605,0.9969185,0.000025234165,0.00052322506,0.00043977608,0.0005473335,0.00004695921,0.000040361698,0.0010329408],"genre_scores_gemma":[0.00003424991,0.99709827,0.00031225584,0.0013856116,0.00010997693,0.000059347327,0.00059987564,0.000055880195,0.00034451182],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99748546,0.0004999484,0.0005890317,0.00078825065,0.000057545283,0.0005797594],"domain_scores_gemma":[0.9991564,0.00013404303,0.000245235,0.00034754872,0.000001268383,0.000115472125],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.0002960114,0.00048656814,0.001433331,0.00013001011,0.00004703833,0.000011860842,0.00063605054,0.00046546975,0.0015800436],"category_scores_gemma":[0.000017483333,0.00035959043,0.00039410658,0.0005172374,0.00030785645,0.00003555982,0.00045061967,0.000968971,0.0034477229],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00001662562,0.000081813574,0.00022793864,0.001479914,0.00045471848,0.0007138953,0.0006567326,0.00007497398,0.019004533,0.00001321554,0.022774357,0.9545013],"study_design_scores_gemma":[0.00017333018,0.00003200597,0.0000047960175,0.00050607935,0.00014300062,0.00017795034,0.0000031721095,0.000002426987,0.00001169296,0.000010327977,0.9985299,0.00040529895],"about_ca_topic_score_codex":0.00008201287,"about_ca_topic_score_gemma":0.000023652958,"teacher_disagreement_score":0.9757556,"about_ca_system_score_codex":0.00027107552,"about_ca_system_score_gemma":0.00002406998,"threshold_uncertainty_score":0.9998856},"labels":[],"label_agreement":null},{"id":"W31132110","doi":"10.1093/femsle/fnz117","title":"The Neogene biota of the Transantarctic Mountains","year":2007,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Geology and Paleoclimatology Research","field":"Earth and Planetary Sciences","cited_by":13,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"National Science Foundation","keywords":"Archaeology; Library science; Geography","score_opus":0.008888985716705797,"score_gpt":0.20997561986385688,"score_spread":0.20108663414715108,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W31132110","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9869261,0.00082310784,0.00005616471,0.010686531,0.0006905773,0.0001610242,0.000028355016,0.000010940907,0.00061723834],"genre_scores_gemma":[0.9971098,0.000052663916,0.00006393181,0.0025828837,0.00004640734,5.321623e-7,0.000028917513,0.000002107162,0.000112760754],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9987638,0.00023874288,0.00022850279,0.00018486122,0.000050944578,0.0005331527],"domain_scores_gemma":[0.99884015,0.00072363915,0.00007764586,0.00029514643,0.000022660854,0.00004077298],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008807398,0.00010692402,0.00014230066,0.00004791246,0.00044527475,0.0000073607216,0.00059145363,0.0001413717,0.0002853457],"category_scores_gemma":[0.000037575966,0.00005458136,0.000096128366,0.00019988629,0.0015181123,0.000024416866,0.000018488723,0.0003287619,0.00014657181],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000069762646,0.000005443125,0.94457793,0.0000041809467,0.000041701594,0.00000968742,0.0001236731,0.00004856582,0.053844303,0.000031654243,0.00062016863,0.0006229411],"study_design_scores_gemma":[0.00023866518,0.000050971514,0.97885686,0.0000050979265,0.000014604415,0.00030660193,0.00010256779,0.000015094234,0.010233505,0.00006653539,0.0100214565,0.00008801607],"about_ca_topic_score_codex":0.00029144404,"about_ca_topic_score_gemma":0.009015711,"teacher_disagreement_score":0.043610796,"about_ca_system_score_codex":0.0000015677638,"about_ca_system_score_gemma":0.000032472766,"threshold_uncertainty_score":0.5593548},"labels":[],"label_agreement":null},{"id":"W3113476963","doi":"10.1093/femsle/fnaa219","title":"Metabolome profiles of the alphaproteobacterial methanotroph <i>Methylocystis</i> sp. Rockwell in response to carbon and nitrogen source","year":2020,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Microbial metabolism and enzyme function","field":"Biochemistry, Genetics and Molecular Biology","cited_by":17,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"Natural Sciences and Engineering Research Council of Canada; Canada First Research Excellence Fund; Alberta Innovates","keywords":"Methanotroph; Chemistry; Ammonium; Nitrate; Methylotroph; Methanol; Nitrogen; Polyhydroxybutyrate; Environmental chemistry; Carbon fibers; Nitrogen cycle; Methane; Anaerobic oxidation of methane; Biology; Organic chemistry; Bacteria; Materials science","score_opus":0.006172751025722019,"score_gpt":0.19029398402137943,"score_spread":0.1841212329956574,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3113476963","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9938297,0.0006154752,0.0002786322,0.0042549158,0.0003835193,0.0004842119,0.00013743716,0.000010115938,0.000005958256],"genre_scores_gemma":[0.9919487,0.000025419638,0.0006544713,0.006923296,0.00030671182,0.000029434726,0.000045970293,0.000026340029,0.000039631846],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99842036,0.00049901556,0.0002964391,0.00045464796,0.000039731432,0.00028979487],"domain_scores_gemma":[0.9994809,0.000023095738,0.00011998653,0.00027066766,0.00002944771,0.00007591558],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000286849,0.00020600791,0.0003086967,0.00005914856,0.000041079,0.000007702268,0.00025648082,0.00018675446,0.000008743804],"category_scores_gemma":[0.00020383394,0.00016318094,0.000086806,0.0001971742,0.00015140095,0.000003554417,0.0002807891,0.00014786585,0.0000053425038],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0020078388,0.000015569733,0.0027135639,0.000015725293,0.000041253654,0.0000015975063,0.00020973402,0.00007847972,0.99249804,0.0000011312386,0.002245492,0.00017155071],"study_design_scores_gemma":[0.00077703124,0.00015803539,0.0029268183,0.0000096976555,0.000030753996,0.000020213294,0.000029228853,0.0000023053933,0.92535204,0.0000021727901,0.0705227,0.00016898825],"about_ca_topic_score_codex":0.00011286697,"about_ca_topic_score_gemma":0.000018723373,"teacher_disagreement_score":0.06827721,"about_ca_system_score_codex":0.000009996097,"about_ca_system_score_gemma":0.000039117513,"threshold_uncertainty_score":0.6654326},"labels":[],"label_agreement":null},{"id":"W3119957577","doi":"10.1093/femsle/fnab001","title":"Capturing the diversity of the human milk microbiota through culture-enriched molecular profiling: a feasibility study","year":2021,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Gut microbiota and health","field":"Biochemistry, Genetics and Molecular Biology","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Population Health Research Institute; McMaster University; University of Manitoba; Children's Hospital Research Institute of Manitoba","funders":"Family Larsson‐Rosenquist Foundation","keywords":"Bifidobacterium; Food science; Biology; Bacteria; Fractionation; Microbiological culture; Microbiology; Composition (language); Streptococcus; Microbiome; Chemistry; Lactobacillus; Chromatography; Fermentation; Bioinformatics; Genetics","score_opus":0.022346741165803787,"score_gpt":0.2735612546703451,"score_spread":0.2512145135045413,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3119957577","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9960484,0.00078783324,0.0001271346,0.0016667488,0.00036775257,0.00082598586,0.00008815937,0.000014392646,0.00007361173],"genre_scores_gemma":[0.99540263,0.00001566498,0.00029252507,0.0037677977,0.00007860549,0.000009004725,0.00023027051,0.000021828742,0.00018168744],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9977926,0.00060454797,0.0003770796,0.0006993155,0.000070458096,0.00045597536],"domain_scores_gemma":[0.99846065,0.000017819015,0.00023462245,0.0011011637,0.00014288341,0.000042873908],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00032154197,0.00029633183,0.0003335799,0.000019723282,0.0006988452,0.00002039536,0.00076687866,0.00023826641,0.000014581509],"category_scores_gemma":[0.00006198397,0.00018843426,0.0003085907,0.00020251179,0.00047600377,0.0000050367325,0.0014211539,0.00037825672,0.0000042552924],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000023892557,0.0002751173,0.107387744,0.000027119831,0.00017784564,0.000009474919,0.0014490631,0.000013364611,0.888185,0.00002944322,0.0024190394,0.0000028784286],"study_design_scores_gemma":[0.0010364235,0.0001306885,0.070268944,0.0000131389115,0.0001030212,0.000070000606,0.0012245668,1.8920547e-7,0.9249485,0.000030927215,0.0019272952,0.00024629748],"about_ca_topic_score_codex":0.00022298888,"about_ca_topic_score_gemma":0.0002506305,"teacher_disagreement_score":0.037118804,"about_ca_system_score_codex":0.000056456498,"about_ca_system_score_gemma":0.00010748512,"threshold_uncertainty_score":0.76841265},"labels":[],"label_agreement":null},{"id":"W3129234718","doi":"10.1093/femsle/fnab024","title":"Growth and adhesion inhibition of pathogenic bacteria by live and heat-killed food-origin <i>Lactobacillus</i> strains or their supernatants","year":2021,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Probiotics and Fermented Foods","field":"Agricultural and Biological Sciences","cited_by":15,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Institute of Human Development, Child and Youth Health; Szkola Glówna Gospodarstwa Wiejskiego w Warszawie; Narodowym Centrum Nauki; Narodowe Centrum Nauki","keywords":"Lactobacillus rhamnosus; Microbiology; Probiotic; Bacteria; Antimicrobial; Pathogenic bacteria; Salmonella; Lactobacillus; Biology; Listeria monocytogenes; Shigella; Escherichia coli; Lactobacillus brevis; Food spoilage; Lactic acid; Lactobacillus plantarum; Biochemistry","score_opus":0.014241915905826283,"score_gpt":0.19128833853991598,"score_spread":0.1770464226340897,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3129234718","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99505794,0.0005199816,0.0000032927912,0.0024731902,0.00011866702,0.00015317649,0.0016393474,0.000020315883,0.000014070307],"genre_scores_gemma":[0.99670845,0.0007008449,0.0000778103,0.0016698302,0.00005346599,0.0000039379206,0.000768137,0.0000019670738,0.00001555113],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9989747,0.00011768917,0.00022969593,0.00037648395,0.000033217264,0.00026824797],"domain_scores_gemma":[0.9996899,0.000082221115,0.00006590158,0.00005422903,0.000036077035,0.000071686474],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000096903765,0.00018211044,0.0002638956,0.000012724856,0.0001117188,0.000029490324,0.000082312785,0.00016526032,0.00010234488],"category_scores_gemma":[0.000019237326,0.000074466436,0.000056810306,0.00011919943,0.00019091574,0.00007086237,0.00011642334,0.00012482575,0.0000025193758],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000052080733,0.000058214202,0.0027888468,0.000013069063,0.000039269853,0.000010321945,0.00012310961,3.2557832e-8,0.9952806,0.000017589222,0.0005484916,0.0010683462],"study_design_scores_gemma":[0.00084561494,0.0009175105,0.03242472,0.00008106233,0.000027881202,0.00021089954,0.00047857713,0.000002496607,0.9620787,0.000046259403,0.0025517952,0.00033449318],"about_ca_topic_score_codex":0.000039992676,"about_ca_topic_score_gemma":0.00014553143,"teacher_disagreement_score":0.033201937,"about_ca_system_score_codex":0.00001394089,"about_ca_system_score_gemma":0.000009497376,"threshold_uncertainty_score":0.3036653},"labels":[],"label_agreement":null},{"id":"W3131077721","doi":"10.1093/femsle/fnab021","title":"<i>AsaGEI2d</i>: a new variant of a genomic island identified in a group of <i>Aeromonas salmonicida</i> subsp. <i>salmonicida</i> isolated from France, which bears the pAsa7 plasmid","year":2021,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Aquaculture disease management and microbiota","field":"Immunology and Microbiology","cited_by":11,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institut universitaire de cardiologie et de pneumologie de Québec; Université Laval","funders":"","keywords":"Aeromonas salmonicida; Biology; Plasmid; Aeromonas; Gene; Microbiology; Pathogen; Genetics; Genomic island; Integrase; Genome; Bacteria","score_opus":0.005503857649763374,"score_gpt":0.18966739753986872,"score_spread":0.18416353989010534,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3131077721","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9832681,0.01050733,0.0005069542,0.0026292028,0.0012277281,0.00067861105,0.0008951124,0.000060751656,0.00022622959],"genre_scores_gemma":[0.99145836,0.00028557703,0.00021654228,0.0036282898,0.000063770894,0.000029678073,0.0030498588,0.000063466796,0.0012044398],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9962115,0.0006607639,0.0012104193,0.000995015,0.00005452568,0.0008677449],"domain_scores_gemma":[0.99785846,0.00033704733,0.0006531791,0.00097149576,0.00012737162,0.00005241862],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00039766796,0.0005663994,0.0011055851,0.00021799764,0.00015668082,0.00003146926,0.00095819705,0.00060695194,0.00090983196],"category_scores_gemma":[0.0000608132,0.0004656414,0.00037225435,0.00076509424,0.00054803974,0.00012417388,0.00048704547,0.0007983606,0.0003222172],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00065330253,0.00031963468,0.005613704,0.00004222634,0.0010379081,0.00013096369,0.0016162795,0.000066411805,0.9357021,0.00009622508,0.05457949,0.00014173899],"study_design_scores_gemma":[0.015901724,0.0003686044,0.06509137,0.0005661336,0.0011393053,0.0005386768,0.0011085415,0.00002102682,0.752035,0.00024059364,0.16132247,0.0016664971],"about_ca_topic_score_codex":0.002602256,"about_ca_topic_score_gemma":0.0043376037,"teacher_disagreement_score":0.18366706,"about_ca_system_score_codex":0.000080707396,"about_ca_system_score_gemma":0.00019447634,"threshold_uncertainty_score":0.9997795},"labels":[],"label_agreement":null},{"id":"W3155105510","doi":"10.1016/s0378-1097(00)00331-1","title":"Purification and characterization of a surface-binding protein from Lactobacillus fermentum RC-14 that inhibits adhesion of Enterococcus faecalis 1131","year":2000,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Biochemical and Structural Characterization","field":"Biochemistry, Genetics and Molecular Biology","cited_by":21,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Health Sciences Centre; Western University","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Lactobacillus fermentum; Enterococcus faecalis; Microbiology; Lactobacillus reuteri; Adhesion; Lactobacillus; Bacteria; Biology; Chemistry; Biochemistry; Lactic acid; Lactobacillus plantarum; Staphylococcus aureus","score_opus":0.007436599094272989,"score_gpt":0.18836850338327202,"score_spread":0.18093190428899902,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3155105510","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9985994,0.0000555673,0.00007846041,0.00038381413,0.000071014816,0.0003113314,0.00048113184,0.000010042888,0.000009198281],"genre_scores_gemma":[0.9936274,0.000090199894,0.00016505532,0.00019831308,0.0000512521,0.000008842825,0.0057295207,0.000013563542,0.000115825285],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9990554,0.000081875914,0.00029887032,0.0003459771,0.00004705876,0.00017082902],"domain_scores_gemma":[0.9995099,0.0000063454213,0.00022362336,0.0001811544,0.00004021025,0.000038770748],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00006088533,0.00016827637,0.00021496949,0.00003261984,0.00004208291,0.000010390556,0.000113055095,0.00024076893,0.000063711705],"category_scores_gemma":[0.000008964552,0.00015098225,0.00005700545,0.000064789616,0.00015394516,0.000012942072,0.000047542133,0.000079750374,0.000004100423],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00018486552,0.000026021044,0.0067117196,0.000027577355,0.00003381424,3.7111573e-7,0.00008190301,7.6997514e-7,0.9915038,0.0000013616778,0.00003457177,0.0013932713],"study_design_scores_gemma":[0.00047948986,0.000088634035,0.019959874,0.000051273128,0.000014383372,0.0000059635163,0.000008616186,0.000004211274,0.9782785,0.0000036063973,0.00096038956,0.00014504946],"about_ca_topic_score_codex":0.000022396422,"about_ca_topic_score_gemma":0.000002593994,"teacher_disagreement_score":0.013248155,"about_ca_system_score_codex":0.000013211498,"about_ca_system_score_gemma":0.000009985555,"threshold_uncertainty_score":0.6156877},"labels":[],"label_agreement":null},{"id":"W3161009735","doi":"10.1093/femsle/fnab050","title":"Chemical composition, antimicrobial, antioxidant and cytotoxic activity of the essential oil from the leaves of <i>Stachys pilifera</i> Benth","year":2021,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Essential Oils and Antimicrobial Activity","field":"Agricultural and Biological Sciences","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institut National de la Recherche Scientifique","funders":"","keywords":"DPPH; Antimicrobial; Food science; Bacillus cereus; Essential oil; Chemistry; Antioxidant; Minimum inhibitory concentration; Biology; Traditional medicine; Microbiology; Bacteria; Biochemistry","score_opus":0.006748916793940406,"score_gpt":0.18440814738749134,"score_spread":0.17765923059355093,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3161009735","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98593384,0.00013003306,0.000009435548,0.012763237,0.00028805988,0.00008842609,0.00075378816,0.000015330237,0.000017827648],"genre_scores_gemma":[0.9976367,0.00013046924,0.000059169357,0.0018546107,0.0001931819,0.0000020408063,0.000105804276,0.0000022973895,0.00001577358],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9986792,0.0003004315,0.00029246125,0.00038777187,0.00007337775,0.0002667155],"domain_scores_gemma":[0.99913186,0.00032970682,0.00027640874,0.00015028354,0.000075540054,0.000036206922],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012314382,0.00019726281,0.00037780966,0.00000655497,0.00023619313,0.000034876542,0.00035130908,0.00013774351,0.000058032656],"category_scores_gemma":[0.00002357046,0.0000738402,0.00022421914,0.00022511151,0.00085302733,0.000083853425,0.00031953113,0.00024734385,0.0000024221158],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000052676314,0.00021701069,0.004558585,0.000017440758,0.000065699474,0.0000034559596,0.00006944912,0.000002826596,0.9926174,0.000018737608,0.0014966258,0.0008800799],"study_design_scores_gemma":[0.00022768177,0.000015525313,0.031399768,0.00007398497,0.000046982466,0.000040235707,0.000023191755,0.0000018498259,0.9675838,0.000008708466,0.00043651453,0.00014180173],"about_ca_topic_score_codex":0.0006629819,"about_ca_topic_score_gemma":0.00024305863,"teacher_disagreement_score":0.026841184,"about_ca_system_score_codex":0.000012361286,"about_ca_system_score_gemma":0.00002007031,"threshold_uncertainty_score":0.3143015},"labels":[],"label_agreement":null},{"id":"W3180688067","doi":"10.1093/femsle/fnab086","title":"<i>Serratia marcescens</i> SCH909 as reservoir and source of genetic elements related to wide dissemination of antimicrobial resistance mechanisms","year":2021,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Antibiotic Resistance in Bacteria","field":"Biochemistry, Genetics and Molecular Biology","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Wilfrid Laurier University; Université Laval","funders":"Agencia Nacional de Promoción Científica y Tecnológica; Consejo Nacional de Investigaciones Científicas y Técnicas; Government of Canada","keywords":"Integron; Biology; Serratia marcescens; Transposable element; Multiple drug resistance; Acinetobacter baumannii; Microbiology; Antibiotic resistance; Plasmid; Antimicrobial; Genetics; Mobile genetic elements; Drug resistance; Pseudomonas aeruginosa; Antibiotics; Gene; Bacteria; Escherichia coli; Mutant","score_opus":0.003426664970363185,"score_gpt":0.2226392736322616,"score_spread":0.21921260866189843,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3180688067","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9953255,0.00029562,0.0023065384,0.0014867722,0.00019473999,0.0002304095,0.00007477919,0.000008684615,0.00007693449],"genre_scores_gemma":[0.98395747,0.00011358561,0.012973737,0.0011903364,0.000022590408,0.0000036342844,0.00029476278,0.000031318505,0.0014125564],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9984016,0.0001634119,0.00055066025,0.0005262942,0.000063823085,0.00029422596],"domain_scores_gemma":[0.9990075,0.00004021454,0.00029110842,0.0004564069,0.00014515482,0.000059616803],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00018511247,0.00020079473,0.00030879947,0.00006728317,0.000060942828,0.000012842767,0.00023462958,0.00021998992,0.000030978677],"category_scores_gemma":[0.00023313759,0.00021500155,0.00007602245,0.00016618043,0.00023924939,0.0000057234574,0.00021925263,0.00010002193,0.00000613704],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00019035998,0.00004245033,0.015861318,0.00008102823,0.00009557049,0.000011913815,0.000097115815,0.000018955927,0.97145766,0.000030802796,0.012048349,0.000064451546],"study_design_scores_gemma":[0.00038320932,0.00009610886,0.017324522,0.00020437033,0.000031215754,0.00004765632,0.00006859553,0.0000010997983,0.9772465,0.00002946173,0.004357266,0.00020996842],"about_ca_topic_score_codex":0.000012423991,"about_ca_topic_score_gemma":0.000067848705,"teacher_disagreement_score":0.011368043,"about_ca_system_score_codex":0.000017717472,"about_ca_system_score_gemma":0.000053843447,"threshold_uncertainty_score":0.8767509},"labels":[],"label_agreement":null},{"id":"W3199992775","doi":"10.1093/femsle/fnab120","title":"Editorial: microbial food and feed ingredients – functionality and health","year":2021,"lang":"en","type":"editorial","venue":"FEMS Microbiology Letters","topic":"Probiotics and Fermented Foods","field":"Agricultural and Biological Sciences","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"","keywords":"Food science; Biotechnology; Food microbiology; Biochemical engineering; Chemistry; Business; Biology; Bacteria; Engineering","score_opus":0.01304505625319523,"score_gpt":0.2225169411606151,"score_spread":0.20947188490741986,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3199992775","genre_codex":"editorial","genre_gemma":"editorial","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"editorial","genre_consensus":"editorial","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0948686,0.0013650258,0.000001534353,0.0058206674,0.89533234,0.00027611642,0.0022675812,0.00005613995,0.000012015002],"genre_scores_gemma":[0.0062540667,0.0005068248,0.000058175145,0.0020162212,0.98332363,0.000012462706,0.0077399574,0.0000052577716,0.00008341848],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99770606,0.00021019635,0.00043123087,0.000927734,0.0001428054,0.0005819991],"domain_scores_gemma":[0.99902254,0.00027014103,0.0003089057,0.0001014105,0.00012821372,0.00016880238],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005289596,0.00041611394,0.00062879245,0.000029799166,0.00037780832,0.0001391493,0.0002396271,0.0010684622,0.00004213076],"category_scores_gemma":[0.00008915543,0.00020602043,0.00011712842,0.00014562829,0.00032631942,0.0000573551,0.00038277428,0.0008728479,0.0000073799683],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000026702062,0.000036998394,0.000096652584,0.000026635924,0.000084627376,0.0000015083195,0.000024481771,6.646751e-8,0.30138147,0.0000035924968,0.6973651,0.0009521416],"study_design_scores_gemma":[0.0004761134,0.0004991321,0.0008019696,0.00008733153,0.000029909086,0.000013769074,0.000026102492,1.7688592e-7,0.00028609432,0.00001932352,0.9973875,0.00037257557],"about_ca_topic_score_codex":0.00030125564,"about_ca_topic_score_gemma":0.0005152877,"teacher_disagreement_score":0.30109537,"about_ca_system_score_codex":0.00010953796,"about_ca_system_score_gemma":0.00006749511,"threshold_uncertainty_score":0.8401269},"labels":[],"label_agreement":null},{"id":"W3201590097","doi":"10.1093/femsle/fnab126","title":"Accumulation of neutral lipids and carotenoids of <i>Rhodotorula diobovata</i> and <i>Rhodosporidium babjevae</i> cultivated under nitrogen-limited conditions with glycerol as a sole carbon source","year":2021,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Microbial Metabolic Engineering and Bioproduction","field":"Biochemistry, Genetics and Molecular Biology","cited_by":12,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Carotenoid; Rhodotorula; Glycerol; Food science; Oleic acid; Nitrogen; Yeast; Fatty acid; Palmitic acid; Biology; Botany; Chemistry; Biochemistry; Organic chemistry","score_opus":0.009167784419592718,"score_gpt":0.22936535333150246,"score_spread":0.22019756891190975,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3201590097","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9975599,0.00069063704,0.0007496093,0.00053770747,0.00015912301,0.00018575325,0.0000855841,0.000017844139,0.000013809888],"genre_scores_gemma":[0.99762183,0.000114748334,0.00072544586,0.0005472789,0.0001485162,0.000008584644,0.00072484306,0.00002597956,0.00008279555],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9989802,0.00009140106,0.00026116052,0.0004102609,0.00003484785,0.00022213037],"domain_scores_gemma":[0.9994076,0.00001131053,0.00014311537,0.0002587442,0.00012716683,0.000052061576],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00010284109,0.00020143282,0.00029129884,0.00006387124,0.00005214635,0.000008684943,0.00006789321,0.00019566831,0.000002855782],"category_scores_gemma":[0.000029147304,0.00018540368,0.00005226427,0.0001615096,0.00030206324,0.0000063001694,0.000069123285,0.00012121474,3.2825156e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001499387,0.00004370084,0.004957458,0.000047609938,0.00016078567,0.0000019648212,0.00007393756,0.0009969561,0.9931615,0.000017089433,0.00033665812,0.000052395495],"study_design_scores_gemma":[0.0010382957,0.00019509991,0.0023180132,0.00003436746,0.0000871491,0.0003074077,0.0000763504,0.000020013673,0.99302757,0.0000066928073,0.002688158,0.00020089801],"about_ca_topic_score_codex":0.00016408514,"about_ca_topic_score_gemma":0.000016393014,"teacher_disagreement_score":0.0026394448,"about_ca_system_score_codex":0.00000925152,"about_ca_system_score_gemma":0.00004516015,"threshold_uncertainty_score":0.7560543},"labels":[],"label_agreement":null},{"id":"W4200098323","doi":"10.1093/femsle/fnab151","title":"Beyond the usual suspects: methanogenic communities in eastern North American peatlands are also influenced by nickel and copper concentrations","year":2021,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Methane Hydrates and Related Phenomena","field":"Environmental Science","cited_by":10,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Laurentian University; University of Alberta; University of Saskatchewan; Ontario Forest Research Institute; Trent University; McGill University","funders":"","keywords":"Peat; Environmental chemistry; Archaea; Methanogenesis; Nickel; Microbial population biology; Methanomicrobiales; Ecology; Methane; Chemistry; Biology; Bacteria; Methanosarcina","score_opus":0.007752510687443762,"score_gpt":0.21305976855650915,"score_spread":0.2053072578690654,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4200098323","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99399805,0.00059234025,0.000013512716,0.0047218967,0.00009819612,0.00013599289,0.00006820578,0.0000136484605,0.0003581761],"genre_scores_gemma":[0.988993,0.00023662171,0.000078896934,0.010020718,0.000016243752,0.000015541174,0.0003547345,0.000011261313,0.00027301392],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9987131,0.00040946508,0.00022866335,0.0002461307,0.000049683233,0.00035296974],"domain_scores_gemma":[0.9993819,0.00016897469,0.00012036618,0.0002646267,0.000007456357,0.00005669929],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014502645,0.00016530021,0.00022669861,0.000024496923,0.00018855529,0.00003350201,0.00022563817,0.00005468414,0.00024327534],"category_scores_gemma":[0.000011353104,0.000118779404,0.00003914568,0.0002732743,0.0012099602,0.000071146096,0.00020304344,0.0003341472,0.000054962948],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000010375914,0.000029999781,0.62908703,0.0000020402554,0.000043771768,0.0000148686595,0.002072703,0.0004055482,0.3635078,0.000005996907,0.0046511586,0.00016867809],"study_design_scores_gemma":[0.004100276,0.0003581813,0.8647317,0.0000708363,0.00019526224,0.00049859355,0.020982934,0.00058677903,0.03412996,0.00009812754,0.07257812,0.0016692303],"about_ca_topic_score_codex":0.0010957754,"about_ca_topic_score_gemma":0.004928746,"teacher_disagreement_score":0.32937786,"about_ca_system_score_codex":0.000065328604,"about_ca_system_score_gemma":0.000011002715,"threshold_uncertainty_score":0.48436835},"labels":[],"label_agreement":null},{"id":"W4205209527","doi":"10.1093/femsle/fnab161","title":"Methane production potential of pulp mill sludges: microbial community and substrate constraints","year":2022,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Microbial Community Ecology and Physiology","field":"Environmental Science","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Laurentian University","funders":"Natural Sciences and Engineering Research Council of Canada; University of Toronto","keywords":"Paper mill; Methanogen; Anaerobic digestion; Methane; Pulp and paper industry; Microbial population biology; Pulp mill; Methanogenesis; Pulp (tooth); Chemistry; Environmental science; Waste management; Environmental chemistry; Biology; Bacteria; Ecology; Environmental engineering; Engineering","score_opus":0.011516429971295804,"score_gpt":0.20501507705109434,"score_spread":0.19349864707979852,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4205209527","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9968952,0.000045392913,0.000031035557,0.0016991703,0.0006835065,0.00028623876,0.00016511112,0.000028698269,0.00016565046],"genre_scores_gemma":[0.99682134,0.000013360723,0.00029018862,0.002346015,0.000030639614,0.000016607084,0.00038483096,0.000013235229,0.00008377316],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99683756,0.0021361737,0.00031902723,0.0002990318,0.00003959878,0.0003686099],"domain_scores_gemma":[0.99921,0.000118177595,0.00021636988,0.00039722415,0.000010034269,0.000048223268],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00091016263,0.00019209906,0.00032333616,0.000073420546,0.0007245383,0.0000048795914,0.00047999824,0.00012092432,0.00421842],"category_scores_gemma":[0.000034355777,0.00020715386,0.00007766351,0.00016904983,0.002424121,0.00007092669,0.0008569693,0.0009956689,0.00004827404],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014774648,0.00016197638,0.0034052187,0.000010588916,0.000054486998,0.0000065275335,0.001000339,0.00068767316,0.9824727,0.000009348032,0.011666334,0.0003770539],"study_design_scores_gemma":[0.0045338497,0.001979805,0.15838866,0.000028528884,0.00028064518,0.004844268,0.0041410066,0.000027355596,0.78562,0.0010284372,0.0373492,0.0017782445],"about_ca_topic_score_codex":0.00092103775,"about_ca_topic_score_gemma":0.0005674831,"teacher_disagreement_score":0.19685271,"about_ca_system_score_codex":0.00009235057,"about_ca_system_score_gemma":0.000017391916,"threshold_uncertainty_score":0.9966919},"labels":[],"label_agreement":null},{"id":"W4205862797","doi":"10.1016/s0378-1097(02)01122-9","title":"Identification of peptide inhibitors of Pseudomonas aeruginosa exotoxin A function using a yeast two-hybrid approach","year":2003,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Toxin Mechanisms and Immunotoxins","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"","keywords":"Peptide; Pseudomonas exotoxin; Biochemistry; Peptide library; Fusion protein; Pseudomonas aeruginosa; Biology; Maltose-binding protein; Biopanning; Yeast; Exotoxin; Enzyme; Function (biology); Peptide sequence; Chemistry; Toxin; Gene; Recombinant DNA; Bacteria; Genetics","score_opus":0.01233084110280388,"score_gpt":0.2142104748375675,"score_spread":0.2018796337347636,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4205862797","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97491795,0.000907975,0.021805026,0.00003688232,0.0015403213,0.00046906027,0.00014680106,0.00004566809,0.0001303393],"genre_scores_gemma":[0.99802035,0.000014619868,0.0011645827,0.00023891548,0.000034681238,0.00002487955,0.0002547515,0.000034111043,0.00021309919],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9975971,0.0005038848,0.00089290336,0.0005034134,0.00003411635,0.0004685978],"domain_scores_gemma":[0.99859995,0.00005653709,0.0006997496,0.00050425355,0.00011694692,0.000022589807],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0005931924,0.00030569563,0.000547859,0.00031252563,0.00014569094,0.000009175795,0.00026430085,0.0002575356,0.00016252184],"category_scores_gemma":[0.0000797145,0.0002982404,0.00021752599,0.00029727133,0.00053897995,0.00011872964,0.000065576816,0.00034294953,0.000080307866],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012843344,0.00021182277,0.00062537636,0.0000374782,0.0002707342,0.0000018641001,0.0002262958,0.0001939168,0.9959396,0.0010422814,0.0010693303,0.00025286648],"study_design_scores_gemma":[0.0015878142,0.00012644261,0.00042130184,0.000039458766,0.00013076191,0.00033955468,0.00027270848,0.000011646526,0.9936051,0.00006636534,0.003124974,0.00027386626],"about_ca_topic_score_codex":0.00010365852,"about_ca_topic_score_gemma":0.0000040817918,"teacher_disagreement_score":0.023102432,"about_ca_system_score_codex":0.000060723483,"about_ca_system_score_gemma":0.000075460805,"threshold_uncertainty_score":0.99994695},"labels":[],"label_agreement":null},{"id":"W4229807184","doi":"10.1016/s0378-1097(02)00507-4","title":"Production of PHA depolymerase A (PhaZ5) from Paucimonas lemoignei in Bacillus subtilis","year":2002,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"biodegradable polymer synthesis and properties","field":"Materials Science","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Natural Sciences and Engineering Research Council of Canada; Deutsche Forschungsgemeinschaft","keywords":"Bacillus subtilis; Escherichia coli; Bacillaceae; Recombinant DNA; Glycosylation; Protease; Extracellular; Biochemistry; Bacillales; Enzyme; Biology; Molecular biology; Mutant; Bacteria; Microbiology; Chemistry; Gene","score_opus":0.02065867783307506,"score_gpt":0.19424023550277822,"score_spread":0.17358155766970315,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4229807184","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97951984,0.014859196,0.000028246286,0.0041250098,0.0010905284,0.00014663728,0.00010474156,0.00004637024,0.00007944372],"genre_scores_gemma":[0.9979433,0.000091422335,0.0005057308,0.0010790131,0.00013125458,0.000024196372,0.000027221775,0.000018074605,0.00017980438],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9983638,0.00024151999,0.0004341952,0.00050214486,0.000063139254,0.0003952143],"domain_scores_gemma":[0.9993172,0.00007758752,0.00016821871,0.00037501895,0.000019579926,0.00004239274],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00021478882,0.00021003658,0.0003669885,0.00012422395,0.00008130248,0.000020270616,0.00028342335,0.00013869115,0.0014058823],"category_scores_gemma":[0.00004817471,0.00017033657,0.000076275246,0.00015239653,0.00037395247,0.00014577495,0.00006349277,0.0001290622,0.00023623249],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006110426,0.000090653615,0.0018757088,0.00001244873,0.00001470606,0.000013746497,0.00089954556,0.0000029641988,0.98310226,0.0000027179346,0.0044269576,0.009497157],"study_design_scores_gemma":[0.00030811454,0.000039817143,0.00068083,0.000042049163,0.000014797593,0.000031219628,0.000078119956,0.000018401546,0.99595857,0.0000070428705,0.0026181312,0.00020293258],"about_ca_topic_score_codex":0.0029382987,"about_ca_topic_score_gemma":0.0003671873,"teacher_disagreement_score":0.018423455,"about_ca_system_score_codex":0.000037280635,"about_ca_system_score_gemma":0.000011868903,"threshold_uncertainty_score":0.99950695},"labels":[],"label_agreement":null},{"id":"W4229830947","doi":"10.1016/s0378-1097(00)00170-1","title":"Multicopy suppression of a gacA mutation by the infC operon in Pseudomonas fluorescens CHA0: competition with the global translational regulator RsmA","year":2000,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Bacterial Genetics and Biotechnology","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Infrastructure Canada; Schweizerischer Nationalfonds zur Förderung der Wissenschaftlichen Forschung","keywords":"Operon; Pseudomonas fluorescens; Biology; Regulator; Repressor; Gene; Genetics; Mutant; Gene expression; Bacteria","score_opus":0.0031137802287383312,"score_gpt":0.19521041905277967,"score_spread":0.19209663882404132,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4229830947","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9867909,0.00024506246,0.00020501824,0.012149656,0.00007790738,0.00030539092,0.00017852067,0.000007678834,0.000039890987],"genre_scores_gemma":[0.99749434,0.00005968382,0.00030254177,0.0012136623,0.0000697513,0.000020222971,0.0007913339,0.000010724137,0.00003775415],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99909496,0.0001417884,0.00021398182,0.00027923964,0.000047200243,0.00022284829],"domain_scores_gemma":[0.99959844,0.000014967224,0.00008616529,0.0002510445,0.000029526003,0.000019860532],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012001624,0.0001536263,0.00014237221,0.00002108515,0.00007956188,0.000010669837,0.00024673625,0.00025268985,0.00006311728],"category_scores_gemma":[0.000004926686,0.0000906852,0.000048576956,0.00010544328,0.00048780898,0.0000036726651,0.000032390606,0.00012578146,0.00000677078],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00037480428,0.00004648379,0.0011730363,0.0000044633543,0.00003096518,0.0000015607238,0.000060782266,0.00023211904,0.99391794,0.00003169019,0.0027423548,0.0013838095],"study_design_scores_gemma":[0.0017284383,0.00035581278,0.016060766,0.00002856424,0.000024089779,0.00015390631,0.000049933566,0.00008536186,0.93808764,0.000018005905,0.043198142,0.0002093416],"about_ca_topic_score_codex":0.000056400688,"about_ca_topic_score_gemma":0.00018317839,"teacher_disagreement_score":0.055830292,"about_ca_system_score_codex":0.00001559348,"about_ca_system_score_gemma":0.000027289187,"threshold_uncertainty_score":0.36980352},"labels":[],"label_agreement":null},{"id":"W4229944344","doi":"10.1111/j.1574-6968.2004.tb09499.x","title":"Cel6B of<i>Thermobifidus fusca</i>and a Cel5-CBM6 of<i>Ruminococcus albus</i>containing a cellulose binding site show synergistic effect on hydrolysis of native plant cellulose","year":2004,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Biofuel production and bioconversion","field":"Engineering","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Toronto Metropolitan University; Université Laval","funders":"","keywords":"Cellulase; Cellulose; Hydrolysis; Xylanase; Chemistry; Enzymatic hydrolysis; Substrate (aquarium); Biochemistry; Ruminococcus; Hemicellulose; Enzyme; Biology","score_opus":0.005415190908039808,"score_gpt":0.17829143124390193,"score_spread":0.17287624033586213,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4229944344","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99777097,0.0004643686,0.00026566975,0.00016415132,0.00053537445,0.0003861769,0.00021932951,0.00007452414,0.000119411954],"genre_scores_gemma":[0.9993183,0.000041592022,0.00018263784,0.00015572613,0.00006477216,0.000013464596,0.00015608352,0.000037666243,0.000029779541],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.998509,0.0001267874,0.00048876327,0.00041449795,0.00008928762,0.00037168254],"domain_scores_gemma":[0.99916434,0.0002026444,0.00025101667,0.00027950673,0.000031360098,0.000071113864],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00033175893,0.00035010625,0.0006406422,0.0003970162,0.000048969683,0.000008280125,0.0001954645,0.0002493492,0.000025330164],"category_scores_gemma":[0.000027036664,0.00030815534,0.0001865123,0.00026529518,0.00035562654,0.000059510927,0.000056808713,0.0003248485,0.000023629318],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002687965,0.000053204967,0.00072863273,0.00052779436,0.00020648693,0.000023144577,0.0010780687,0.0018394678,0.99463046,0.000012719428,0.00032114118,0.00031010414],"study_design_scores_gemma":[0.001531895,0.0006408846,0.0002431839,0.00023255376,0.0001192913,0.000030813968,0.00006745243,0.00016252941,0.9959295,0.0000035169885,0.000740194,0.00029823405],"about_ca_topic_score_codex":0.00011983977,"about_ca_topic_score_gemma":0.000007934306,"teacher_disagreement_score":0.0016769384,"about_ca_system_score_codex":0.00010072109,"about_ca_system_score_gemma":0.000017913315,"threshold_uncertainty_score":0.99993706},"labels":[],"label_agreement":null},{"id":"W4230168827","doi":"10.1016/j.femsle.2004.06.027","title":"Effect of uncouplers on endogenous respiration and ferrous iron oxidation in a chemolithoautotrophic bacterium Acidithiobacillus (Thiobacillus) ferrooxidans","year":2004,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Metal Extraction and Bioleaching","field":"Engineering","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba","funders":"","keywords":"Ferrous; Chemistry; Rotenone; Dinitrophenol; NAD+ kinase; Redox; Respiratory chain; Oxidative phosphorylation; Biochemistry; Endogeny; Respiration; Nuclear chemistry; Inorganic chemistry; Mitochondrion; Organic chemistry; Enzyme; Biology","score_opus":0.00960232835552435,"score_gpt":0.20388764557171224,"score_spread":0.19428531721618789,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4230168827","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9980081,0.000116744515,0.00049963046,0.00029704333,0.0004623383,0.0003335281,0.0000155848,0.000111247355,0.00015583489],"genre_scores_gemma":[0.9992174,0.000038370108,0.00016178309,0.00038999732,0.000055388802,0.000018790923,0.00008467301,0.00002714987,0.0000064651663],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99884903,0.00014406457,0.00034828766,0.00029174445,0.000059033424,0.0003078124],"domain_scores_gemma":[0.9995898,0.000067214736,0.000086507614,0.00019482066,0.000012208457,0.00004945597],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00039213608,0.00025813677,0.00033030036,0.0002412418,0.000052171574,0.00001636017,0.000099655445,0.00020620327,0.00001351088],"category_scores_gemma":[0.000044819386,0.00023105228,0.00006540583,0.00016148936,0.00009146267,0.000106939624,0.000019353718,0.00034491258,0.000029267456],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013666844,0.00002112409,0.00023676113,0.00009054223,0.00002053771,0.000019741832,0.000286511,0.02013756,0.9763454,0.000019041985,0.0000134444135,0.0026726315],"study_design_scores_gemma":[0.0022308563,0.0006878037,0.0039038812,0.00010492641,0.000027457065,0.00023089274,0.00002529453,0.00030464272,0.9915145,0.000007101901,0.0006087933,0.0003538439],"about_ca_topic_score_codex":0.0001200691,"about_ca_topic_score_gemma":0.000088793495,"teacher_disagreement_score":0.019832917,"about_ca_system_score_codex":0.00024930568,"about_ca_system_score_gemma":0.000012372199,"threshold_uncertainty_score":0.9422039},"labels":[],"label_agreement":null},{"id":"W4230544407","doi":"10.1016/s0378-1097(01)00508-0","title":"A protein kinase inhibitor as an antimycobacterial agent","year":2001,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Microbial Natural Products and Biosynthesis","field":"Medicine","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"Canadian Institutes of Health Research; British Columbia Lung Association","keywords":"Mycobacterium smegmatis; Mycobacterium bovis; Growth inhibition; Kinase; Mycobacterium tuberculosis; Threonine; Antimycobacterial; Protein kinase A; Biology; Mycobacterium; Microbiology; Protein kinase C; Phosphorylation; Serine; Biochemistry; Molecular biology; Bacteria; Cell growth; Tuberculosis; Medicine","score_opus":0.01186852561968789,"score_gpt":0.23589388952241552,"score_spread":0.22402536390272762,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4230544407","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97831243,0.00008450174,0.000007191139,0.019747382,0.00082990807,0.0007413466,0.000043913544,0.000117535084,0.00011581853],"genre_scores_gemma":[0.98280746,0.000019029538,0.00097049744,0.013083363,0.0017214529,0.000004715551,0.00035406448,0.000032361706,0.0010070731],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99850285,0.000111612666,0.00029178525,0.00056262495,0.00005264482,0.00047848298],"domain_scores_gemma":[0.99927896,0.000013239181,0.00009699818,0.00040340764,0.00005604491,0.00015132297],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00018114442,0.00025825627,0.00036409567,0.00012717034,0.00011157075,0.000030735915,0.00015011455,0.00022327296,0.0008194692],"category_scores_gemma":[0.0000775091,0.00019490691,0.00012250154,0.00016434806,0.00020329074,0.00009560767,0.00006445239,0.00028237142,0.000538544],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0007681893,0.00018077683,0.00038748953,0.000021002112,0.000056484132,0.0003810742,0.00007475347,1.365353e-7,0.9746891,0.000013147119,0.020075804,0.0033519974],"study_design_scores_gemma":[0.0010612373,0.00041927927,0.00073515886,0.00007289423,0.00004717871,0.0010611697,0.000012938796,8.389023e-7,0.72592425,0.000005429366,0.2704171,0.00024254085],"about_ca_topic_score_codex":0.0001260287,"about_ca_topic_score_gemma":0.000014191251,"teacher_disagreement_score":0.2503413,"about_ca_system_score_codex":0.00007618079,"about_ca_system_score_gemma":0.000049592425,"threshold_uncertainty_score":0.8972613},"labels":[],"label_agreement":null},{"id":"W4233297865","doi":"10.1016/s0378-1097(00)00350-5","title":"Protoplast preparation and regeneration from spores of the biocontrol fungus Pseudozyma flocculosa","year":2000,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Nematode management and characterization studies","field":"Agricultural and Biological Sciences","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Protoplast; Spore; Sucrose; Fungus; Regeneration (biology); Biological pest control; Biology; Microbiology; Chemistry; Biochemistry; Botany; Cell biology","score_opus":0.005393503147464961,"score_gpt":0.1748489307900029,"score_spread":0.16945542764253796,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4233297865","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9937963,0.000074894895,0.0000040930167,0.0054224273,0.00008446594,0.0004400603,0.00007637751,0.000018865512,0.00008255357],"genre_scores_gemma":[0.99805814,0.00003083835,0.00001879894,0.0012972695,0.00012886041,0.00003873701,0.00017517115,5.727963e-7,0.0002516389],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9994773,0.00005704089,0.00015944974,0.00017621537,0.000030631145,0.00009930783],"domain_scores_gemma":[0.9998047,0.000032665917,0.000087410204,0.000048274294,0.000015717638,0.000011254178],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000052345054,0.000085402826,0.00011767492,0.0000058357778,0.00013734758,0.00002134076,0.000096327996,0.00004522688,0.00035927104],"category_scores_gemma":[0.000004523,0.000030098456,0.0000377334,0.000080461396,0.00010099604,0.000056953126,0.00003522843,0.00003678887,0.000013332836],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000041648138,0.000012381972,0.017430382,0.000002014492,0.000020730542,2.555163e-7,0.00009902862,0.000006369734,0.9754383,0.00001377218,0.0018785077,0.005056588],"study_design_scores_gemma":[0.00064424,0.0001358381,0.60713726,0.000041438983,0.000054116557,0.000008386386,0.00013703911,0.00008865991,0.32640862,0.00007933947,0.0649713,0.0002937363],"about_ca_topic_score_codex":0.00009466979,"about_ca_topic_score_gemma":0.00019060101,"teacher_disagreement_score":0.6490297,"about_ca_system_score_codex":0.000004699225,"about_ca_system_score_gemma":0.0000011534053,"threshold_uncertainty_score":0.3933766},"labels":[],"label_agreement":null},{"id":"W4233372476","doi":"10.1016/s0378-1097(00)00314-1","title":"Genomics of the 35-kb pvd locus and analysis of novel pvdIJK genes implicated in pyoverdine biosynthesis in Pseudomonas aeruginosa","year":2000,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Biochemical and Molecular Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":5,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Medical Research Council Canada; Federation of European Microbiological Societies","keywords":"Pyoverdine; Pseudomonas aeruginosa; Locus (genetics); Gene; Genetics; Biology; Microbiology; Biosynthesis; Computational biology; Bacteria","score_opus":0.007723367726015716,"score_gpt":0.22649692581444383,"score_spread":0.2187735580884281,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4233372476","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99721724,0.0013254806,0.00005575504,0.0009931886,0.000018600267,0.0001850033,0.00016270102,0.000002574427,0.000039437284],"genre_scores_gemma":[0.9985029,0.000502537,0.00023247891,0.0005695121,0.000015048209,0.000010277399,0.00012369225,0.000012703719,0.000030848463],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9988133,0.00009289218,0.00035183874,0.00039832413,0.000044054956,0.0002996137],"domain_scores_gemma":[0.99942195,0.000029143323,0.00009267882,0.00039263364,0.000025901298,0.000037710157],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00017670562,0.00016304658,0.0003596307,0.00018017321,0.000022070495,0.000004351872,0.00032316367,0.00023678363,0.000024544608],"category_scores_gemma":[0.000027494374,0.00012766656,0.00016372127,0.00052995316,0.00044378577,0.0000021162602,0.0001726995,0.00013606422,9.3816095e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012653273,0.00011087971,0.021883396,0.0000118138,0.00025606356,0.0000024398469,0.000031159667,0.00017272754,0.9739859,0.0000039839265,0.00010321306,0.0033118916],"study_design_scores_gemma":[0.0006547613,0.00003899661,0.022366067,0.000012666419,0.00006951475,0.000016890279,0.000011786721,0.000049841652,0.9741933,0.0000025747552,0.002444644,0.00013897523],"about_ca_topic_score_codex":0.0003229173,"about_ca_topic_score_gemma":0.00020991513,"teacher_disagreement_score":0.0031729164,"about_ca_system_score_codex":0.000023432229,"about_ca_system_score_gemma":0.000034107048,"threshold_uncertainty_score":0.52060914},"labels":[],"label_agreement":null},{"id":"W4233900283","doi":"10.1111/j.1574-6968.2004.tb09553.x","title":"The effect of NAGâthiazoline on morphology and surface hydrophobicity of<i>Escherichia coli</i>","year":2004,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Carbohydrate Chemistry and Synthesis","field":"Chemistry","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research","keywords":"Thiazoline; Escherichia coli; Lysis; Biochemistry; Chemistry; Lytic cycle; Biosynthesis; Yield (engineering); Enzyme; Biology; Stereochemistry","score_opus":0.0043992960279591025,"score_gpt":0.19470529653826965,"score_spread":0.19030600051031055,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4233900283","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99763095,0.00024400499,0.000005285112,0.0013252795,0.000105284766,0.00007292537,0.00007587221,0.000023364095,0.00051701895],"genre_scores_gemma":[0.99934185,0.000051148694,0.00005496018,0.0003966547,0.00004501826,0.0000059116105,0.000027477783,0.000016706494,0.00006029605],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99902046,0.00006846827,0.00030670714,0.0002874216,0.000041079693,0.00027584936],"domain_scores_gemma":[0.99875474,0.0006168977,0.00019940596,0.0003698887,0.000017505085,0.000041580905],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00022857059,0.00021260293,0.00041057947,0.00001618968,0.00009349261,0.000005700792,0.00024216513,0.00022124649,0.00004172059],"category_scores_gemma":[0.00008026932,0.00015079336,0.00011801053,0.000082362276,0.0007812377,0.00001238668,0.000069050184,0.00027053527,0.0000074317263],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00032547352,0.000026833408,0.0012008869,0.00008528667,0.000094399285,0.00001260933,0.00006392464,0.00037908414,0.99743456,0.000014224791,0.00030660917,0.000056139204],"study_design_scores_gemma":[0.00089675037,0.00009556269,0.00009418593,0.000041860174,0.000040750125,0.00004308787,0.000015483509,0.000003739964,0.99753875,0.000011682952,0.0010861118,0.00013204411],"about_ca_topic_score_codex":0.00008789553,"about_ca_topic_score_gemma":0.0000050095728,"teacher_disagreement_score":0.0017108611,"about_ca_system_score_codex":0.000040934996,"about_ca_system_score_gemma":0.000017953138,"threshold_uncertainty_score":0.6149175},"labels":[],"label_agreement":null},{"id":"W4233931786","doi":"10.1016/s0378-1097(02)00508-6","title":"LC-MS analysis of pig intestine sulfatides: Interaction with Escherichia coli STb enterotoxin and characterization of molecular species present","year":2002,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Veterinary medicine and infectious diseases","field":"Veterinary","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal","funders":"","keywords":"Enterotoxin; Chemistry; Escherichia coli; Monoclonal antibody; Enterotoxigenic Escherichia coli; Biochemistry; Fatty acid; Electrospray ionization; Residue (chemistry); Epitope; Chromatography; Mass spectrometry; Antibody; Biology","score_opus":0.02830042331124895,"score_gpt":0.25534097763356284,"score_spread":0.2270405543223139,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4233931786","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99754465,0.00006438493,0.0011935262,0.00051861035,0.000101313206,0.00031351953,0.0001017426,0.000033219334,0.00012904186],"genre_scores_gemma":[0.9988047,0.000043182677,0.00013761113,0.000560799,0.000043024873,0.000029284596,0.00031819777,0.000017162112,0.000046059453],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99892294,0.00016247999,0.00039238328,0.00028248312,0.000058824084,0.00018085912],"domain_scores_gemma":[0.9992251,0.00006624359,0.00034351787,0.0002422945,0.00007597477,0.000046872738],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000074598436,0.00019126329,0.00045049697,0.0003615169,0.000034664343,0.000010077383,0.00010120879,0.00006117804,0.00053589116],"category_scores_gemma":[0.000028889586,0.0001598698,0.00009750609,0.0004049571,0.00028232092,0.00012829994,0.00006232815,0.00011361177,0.0000054462803],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00034201163,0.00019064617,0.039616022,0.0000670783,0.000843081,0.000050234878,0.00049338635,0.000041013882,0.957906,0.0000042305596,0.00031878043,0.0001275324],"study_design_scores_gemma":[0.0029135924,0.0088260695,0.5653351,0.0004985225,0.0025487528,0.0006703285,0.0005424713,0.0025940768,0.4103536,0.0000024961814,0.004940907,0.00077409454],"about_ca_topic_score_codex":0.00011297508,"about_ca_topic_score_gemma":0.000008450555,"teacher_disagreement_score":0.54755235,"about_ca_system_score_codex":0.000031178966,"about_ca_system_score_gemma":0.000005441431,"threshold_uncertainty_score":0.65193015},"labels":[],"label_agreement":null},{"id":"W4235700220","doi":"10.1016/s0378-1097(02)00676-6","title":"A molecular approach for early monitoring of decay basidiomycetes in wood chips","year":2002,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Enzyme-mediated dye degradation","field":"Agricultural and Biological Sciences","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Environmental science; Chemistry","score_opus":0.020638324359275265,"score_gpt":0.19502268656423677,"score_spread":0.1743843622049615,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4235700220","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9981898,0.00029445806,0.00006968478,0.0008834848,0.0001339387,0.00029191267,0.000043502514,0.000029788063,0.000063406595],"genre_scores_gemma":[0.9977352,0.000013337348,0.0017206157,0.00022508155,0.000107789645,0.00004972369,0.00013149566,0.0000017498633,0.000015031687],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99907804,0.00008268017,0.00023081466,0.00027449377,0.00003814798,0.00029582737],"domain_scores_gemma":[0.9996618,0.00012364483,0.000099638404,0.00005816798,0.000024506919,0.00003222372],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014929568,0.00012672241,0.00019473085,0.00003612751,0.000043382064,0.00001124601,0.00021364873,0.0001391958,0.000018201257],"category_scores_gemma":[0.000031101277,0.000060016628,0.00008286374,0.00024790753,0.00007417437,0.000061086794,0.000028854582,0.00011784345,0.0000075568646],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00001020818,0.000053284457,0.046090342,0.00000568648,0.000013173656,0.0000018960944,0.00009549702,0.000027088878,0.9514123,0.00001327303,0.0002809281,0.0019963272],"study_design_scores_gemma":[0.0006280394,0.00023008113,0.10648619,0.000031952393,0.000016365415,0.000014655871,0.00013704911,0.00009350253,0.89119124,0.00001657626,0.0008548035,0.00029957108],"about_ca_topic_score_codex":0.00006765958,"about_ca_topic_score_gemma":0.000012383996,"teacher_disagreement_score":0.060395844,"about_ca_system_score_codex":0.000022745937,"about_ca_system_score_gemma":0.0000013267551,"threshold_uncertainty_score":0.24474071},"labels":[],"label_agreement":null},{"id":"W4236997243","doi":"10.1016/s0378-1097(01)00109-4","title":"A novel actin-related protein gene of Colletotrichum gloeosporioides f. sp. malvae shows altered expression corresponding with spore production","year":2001,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Plant Pathogens and Fungal Diseases","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"Advanced Research Projects Agency; Federation of European Microbiological Societies","keywords":"Biology; Gene; Spore; Gene expression; Hypha; Microbiology; Colletotrichum; Genetics; Cell biology; Botany","score_opus":0.0085523645222137,"score_gpt":0.20152925571236818,"score_spread":0.1929768911901545,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4236997243","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99721193,0.00032924625,0.0007541547,0.00029545545,0.0003000827,0.00057162234,0.00046188454,0.000027618053,0.000047977854],"genre_scores_gemma":[0.9950726,0.000041441846,0.0022045413,0.0003209274,0.00021567632,0.00003738501,0.0012771004,0.000033648987,0.0007966708],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9985908,0.00007529738,0.0003207418,0.00057425234,0.00006565869,0.0003732364],"domain_scores_gemma":[0.99919385,0.000011396898,0.0002882893,0.00035364588,0.00007638563,0.00007642057],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015075417,0.00026507038,0.000280469,0.00012285238,0.000112023146,0.000011514783,0.00019963164,0.0002137756,0.000036926765],"category_scores_gemma":[0.000058463025,0.00021786848,0.00010211262,0.00021098537,0.00018005967,0.0000094815905,0.00008042466,0.00013729745,0.0000066207795],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0014882615,0.00014529245,0.014410479,0.000021540875,0.000095499236,0.000038320526,0.000035230707,0.00016536847,0.9807121,0.000002351867,0.002746738,0.00013879161],"study_design_scores_gemma":[0.000943081,0.0002872904,0.012580768,0.00009494808,0.000044014734,0.0007040815,0.0000512557,0.0000061762357,0.9783321,0.0000011017484,0.0066501554,0.00030500992],"about_ca_topic_score_codex":0.000017800905,"about_ca_topic_score_gemma":0.000014682631,"teacher_disagreement_score":0.0039034176,"about_ca_system_score_codex":0.000024871531,"about_ca_system_score_gemma":0.00005905093,"threshold_uncertainty_score":0.8884419},"labels":[],"label_agreement":null},{"id":"W4237364334","doi":"10.1016/s0378-1097(01)00086-6","title":"Heat-labile proteases in molecular biology applications","year":2001,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Enzyme Production and Characterization","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Victoria","funders":"","keywords":"Thermolabile; Proteases; Protease; Psychrotrophic bacteria; Enzyme; Biochemistry; Biology; Bacteria; Thermophile; Chemistry; Genetics","score_opus":0.005102304489150948,"score_gpt":0.23665504911479607,"score_spread":0.23155274462564512,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4237364334","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9726891,0.00030054705,0.022217099,0.003978585,0.00016042042,0.00045572454,0.000025376323,0.000027763937,0.00014539332],"genre_scores_gemma":[0.99084616,0.000115548384,0.0009236715,0.005772115,0.00026301722,0.0003363098,0.001504003,0.000023224306,0.00021593668],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99901694,0.00009642047,0.00019795625,0.00042033682,0.000015866513,0.00025246872],"domain_scores_gemma":[0.9995991,0.0000048516104,0.000033123182,0.00029501933,0.000031448304,0.00003646705],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00008930777,0.00013679176,0.00012277428,0.00008664818,0.00004887261,0.000008477407,0.000152218,0.00016110431,0.000055484103],"category_scores_gemma":[0.000020962441,0.00013923716,0.000050058192,0.00015207045,0.00013159063,0.0000035822036,0.000055954828,0.000099744946,0.000050214094],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000027744056,0.000062637344,0.009833605,0.000004115654,0.00001530846,0.000002927676,0.00001277385,0.000043129392,0.98815256,0.00007174786,0.0010872714,0.00068617816],"study_design_scores_gemma":[0.0004040284,0.00006855725,0.0012321112,0.000004555914,0.0000051528386,0.000098185104,0.000013474458,0.0000037584848,0.67503923,0.000029384657,0.32291198,0.00018960616],"about_ca_topic_score_codex":0.000017183509,"about_ca_topic_score_gemma":0.000015606352,"teacher_disagreement_score":0.3218247,"about_ca_system_score_codex":0.000018398823,"about_ca_system_score_gemma":0.000021999715,"threshold_uncertainty_score":0.5677927},"labels":[],"label_agreement":null},{"id":"W4237402660","doi":"10.1016/s0378-1097(01)00480-3","title":"Role of membranes in the activities of antimicrobial cationic peptides","year":2002,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Antimicrobial Peptides and Activities","field":"Immunology and Microbiology","cited_by":41,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"Cationic polymerization; Membrane; Antimicrobial peptides; Antimicrobial; Amphiphile; Chemistry; Cytoplasm; Biochemistry; Biophysics; Biology; Peptide; Organic chemistry; Copolymer","score_opus":0.009500447258034872,"score_gpt":0.19550897143477652,"score_spread":0.18600852417674166,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4237402660","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99574405,0.001414902,0.000010015686,0.0014078942,0.00025907467,0.00025175017,0.00013093557,0.000022748174,0.00075862714],"genre_scores_gemma":[0.9982214,0.0002044898,0.00008185956,0.0010238528,0.00003620648,0.000012053955,0.000093095776,0.000017249304,0.00030977745],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9984477,0.00033122278,0.0005001988,0.000281465,0.000021683893,0.0004177168],"domain_scores_gemma":[0.99896795,0.00032477806,0.00032248214,0.00034538395,0.000031651005,0.000007747224],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002467134,0.00023580968,0.0005016512,0.00022441475,0.00011427769,0.000009641186,0.00049162394,0.00023152992,0.00035145212],"category_scores_gemma":[0.000029156821,0.00018052281,0.00018699231,0.00020619266,0.0012200628,0.00013310165,0.00007523543,0.00033208946,0.00007264291],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000052690924,0.00019802233,0.0027724183,0.000048841408,0.000102456586,0.0000020074351,0.003305725,0.00004110915,0.98366153,0.0002461928,0.009023872,0.0005451313],"study_design_scores_gemma":[0.0008280137,0.000084381776,0.0026114108,0.000074356954,0.00004091394,0.00021460856,0.0017938463,0.0000023291043,0.98782724,0.000027533197,0.0062661315,0.0002292403],"about_ca_topic_score_codex":0.00042087695,"about_ca_topic_score_gemma":0.00012803932,"teacher_disagreement_score":0.004165701,"about_ca_system_score_codex":0.00002358244,"about_ca_system_score_gemma":0.000018289677,"threshold_uncertainty_score":0.7361507},"labels":[],"label_agreement":null},{"id":"W4238320057","doi":"10.1016/s0378-1097(02)00911-4","title":"The identification of five genetic loci of Francisella novicida associated with intracellular growth","year":2002,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Bacillus and Francisella bacterial research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":10,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Victoria","funders":"","keywords":"Francisella; Biology; Francisella tularensis; Transposable element; Gene; Operon; Mutant; Genetics; Heat shock protein; Molecular biology; Virulence","score_opus":0.005975269232342122,"score_gpt":0.19193431117452228,"score_spread":0.18595904194218016,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4238320057","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99707747,0.0012328569,0.0007545874,0.00046611688,0.000115585,0.0002176706,0.00007141707,0.000004805402,0.00005947479],"genre_scores_gemma":[0.9989823,0.00029335727,0.00007344769,0.00016776734,0.00006542405,0.000012057496,0.00013917292,0.000018108833,0.0002483432],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9988321,0.0001397798,0.0003932313,0.00027260228,0.000072559706,0.00028973943],"domain_scores_gemma":[0.9990707,0.000055340766,0.00029175344,0.0003383529,0.00020837331,0.00003547302],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00028611423,0.0001383108,0.00019689232,0.000039742557,0.000096353186,0.000011395531,0.0003170761,0.00017090303,0.000041102605],"category_scores_gemma":[0.00013971637,0.000098688135,0.000080036145,0.00014175005,0.00058527064,0.0000024489889,0.00005788238,0.000113978575,0.000012575538],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008425478,0.000052242918,0.001731541,0.000012460243,0.00013274772,0.000002082721,0.00008655464,0.000036731308,0.99479413,0.000012883891,0.0022508602,0.00080349273],"study_design_scores_gemma":[0.0007152188,0.0002517563,0.0074226465,0.000012899173,0.000028064953,0.000012843622,0.000026977557,0.00010110311,0.9878037,0.000009817135,0.0034605698,0.00015443258],"about_ca_topic_score_codex":0.000034558052,"about_ca_topic_score_gemma":0.00003699449,"teacher_disagreement_score":0.0069904774,"about_ca_system_score_codex":0.000014398979,"about_ca_system_score_gemma":0.000017617962,"threshold_uncertainty_score":0.40243855},"labels":[],"label_agreement":null},{"id":"W4239340399","doi":"10.1111/j.1574-6968.2004.tb09768.x","title":"Cholesterol and the activity of bacterial toxins","year":2004,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Lipid Membrane Structure and Behavior","field":"Biochemistry, Genetics and Molecular Biology","cited_by":85,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Waterloo","funders":"","keywords":"Cytolysin; Vibrio cholerae; Toxin; Microbiology; Cholesterol; Microbial toxins; Staphylococcus aureus; Bacteria; Hemolysin; Diphtheria toxin; Biology; Membrane fluidity; Pore-forming toxin; Chemistry; Biochemistry; Membrane; Virulence","score_opus":0.004801956166356833,"score_gpt":0.2067755194454433,"score_spread":0.20197356327908647,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4239340399","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9977894,0.00002660466,0.000084888816,0.001534088,0.00034026726,0.00015249806,0.000033834796,0.00000485477,0.000033563872],"genre_scores_gemma":[0.99810624,0.000020157717,0.00009543577,0.0014434115,0.00023361067,0.000007584551,0.000059781985,0.000008515999,0.000025286643],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99946827,0.00005782776,0.00010775021,0.00019839061,0.00001778104,0.00014995791],"domain_scores_gemma":[0.9996754,0.000008443355,0.00006965582,0.00021029051,0.000013648592,0.000022555032],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0000850776,0.000109518296,0.00015207035,0.000017279905,0.000045833465,0.0000073647757,0.00012634063,0.0001145178,0.000009388569],"category_scores_gemma":[0.000012322878,0.00007107626,0.00006594036,0.0000249841,0.0004958033,0.000002534706,0.000079530924,0.00008109033,0.0000022027598],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00019273465,0.000015096237,0.00029818862,0.0000050056874,0.000032800188,5.227174e-7,0.0000661209,0.000004420794,0.9987461,0.000022273005,0.00014391725,0.00047283698],"study_design_scores_gemma":[0.0024882623,0.00007312166,0.0044996226,0.0000042401325,0.000025450578,0.0000791976,0.000007727285,4.4724477e-8,0.9881791,0.000004116808,0.004554698,0.00008441727],"about_ca_topic_score_codex":0.00004318762,"about_ca_topic_score_gemma":0.00003933546,"teacher_disagreement_score":0.0105669815,"about_ca_system_score_codex":0.000005374128,"about_ca_system_score_gemma":0.00001989977,"threshold_uncertainty_score":0.28984058},"labels":[],"label_agreement":null},{"id":"W4239781860","doi":"10.1016/s0378-1097(01)00579-1","title":"FlaK of the archaeon Methanococcus maripaludis possesses preflagellin peptidase activity.","year":2002,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Protist diversity and phylogeny","field":"Biochemistry, Genetics and Molecular Biology","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Queen's University","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Methanococcus; Biochemistry; Biology; Enzyme; Escherichia coli; Membrane; Collodion; Molecular biology; Chemistry; Gene","score_opus":0.012726846812515498,"score_gpt":0.2004469142927908,"score_spread":0.1877200674802753,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4239781860","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99663746,0.00037846607,0.00031712142,0.00158335,0.00027900652,0.000258985,0.00015583185,0.000009475064,0.0003803064],"genre_scores_gemma":[0.99723476,0.00007411385,0.0002140944,0.0014868351,0.00010602258,0.000010142708,0.000046766567,0.0000123028685,0.00081497524],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99899507,0.0002041314,0.00014255976,0.00033244706,0.00004214923,0.00028367408],"domain_scores_gemma":[0.99930066,0.000026869955,0.00013278521,0.0004650102,0.00003415269,0.0000405523],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00011440211,0.00017082307,0.00017900762,0.000039175466,0.00011412241,0.0000070019046,0.00046460947,0.00018581338,0.00013366848],"category_scores_gemma":[0.00004190604,0.00013534087,0.00017551538,0.00009863979,0.0004774696,0.000004179407,0.00030681732,0.00016380506,0.00003428744],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00005016801,0.000062880674,0.011004838,0.00001964996,0.000096720025,0.0000042759675,0.000118368254,0.000025810517,0.97716933,0.000007952968,0.01077584,0.0006641861],"study_design_scores_gemma":[0.00039641367,0.00010574901,0.010558637,0.000012485176,0.00003119892,0.000036231864,0.000013972771,0.0000043114956,0.9736796,0.000014939265,0.014972463,0.00017400763],"about_ca_topic_score_codex":0.000051213465,"about_ca_topic_score_gemma":0.000047936097,"teacher_disagreement_score":0.004196623,"about_ca_system_score_codex":0.000012942356,"about_ca_system_score_gemma":0.000014825116,"threshold_uncertainty_score":0.5519041},"labels":[],"label_agreement":null},{"id":"W4239907112","doi":"10.1016/s0378-1097(99)00579-0","title":"Tn917-lac mutagenesis of Streptococcus mutans to identify environmentally regulated genes","year":2000,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Streptococcal Infections and Treatments","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Transposon mutagenesis; Biology; lac operon; Mutagenesis; Transposable element; Mutant; Molecular biology; Plasmid; Streptococcus mutans; Escherichia coli; Gene; Transposition (logic); Biochemistry; Bacteria; Genetics","score_opus":0.011308102824562617,"score_gpt":0.27117084412672166,"score_spread":0.25986274130215903,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4239907112","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99674946,0.00012298881,0.000056066496,0.0015586371,0.00015579221,0.00085172703,0.00011267317,0.00006583655,0.0003267912],"genre_scores_gemma":[0.9955584,0.000037527156,0.0005581678,0.0019564521,0.00007243069,0.00008736609,0.00024330043,0.00003097474,0.0014553984],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.998738,0.00006076791,0.00037254748,0.00043006014,0.000056865625,0.00034177495],"domain_scores_gemma":[0.99930954,0.00003351515,0.000079020625,0.0004278434,0.000023862667,0.00012623795],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00006048713,0.00023436468,0.00038625952,0.00015520031,0.00008186577,0.000007915087,0.000103469865,0.00015114347,0.004093093],"category_scores_gemma":[0.000007649304,0.00020565676,0.00016469408,0.00025602852,0.00020076225,0.000038865834,0.00003720229,0.000099449775,0.00072901783],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000104230436,0.00023155774,0.107798,0.00001090499,0.00032642097,0.00006702296,0.00008325505,0.00011358581,0.87752193,0.0000017433529,0.002210992,0.011530368],"study_design_scores_gemma":[0.0020933305,0.0004932753,0.46803612,0.00006807312,0.00026429462,0.00027781262,0.000045321824,0.000004866733,0.5061674,0.000004166555,0.022279082,0.00026628212],"about_ca_topic_score_codex":0.0001927883,"about_ca_topic_score_gemma":0.000015803385,"teacher_disagreement_score":0.37135452,"about_ca_system_score_codex":0.00010949935,"about_ca_system_score_gemma":0.000019344836,"threshold_uncertainty_score":0.9968173},"labels":[],"label_agreement":null},{"id":"W4240303296","doi":"10.1016/s0378-1097(00)00493-6","title":"Dynamic accumulation and degradation of poly(3-hydroxyalkanoate)s in living cells of Azotobacter vinelandii UWD characterized by 13C NMR","year":2000,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"biodegradable polymer synthesis and properties","field":"Materials Science","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Tsinghua University; University of Alberta","keywords":"Azotobacter vinelandii; Degradation (telecommunications); Azotobacteraceae; Carbon-13 NMR; Chemistry; Strain (injury); Monomer; Industrial fermentation; Biochemistry; Biology; Organic chemistry; Fermentation; Polymer; Nitrogen","score_opus":0.010668181067824686,"score_gpt":0.21024243102511192,"score_spread":0.19957424995728723,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4240303296","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99711627,0.0020092747,0.0001012595,0.00034240005,0.00010645422,0.00016914801,0.000119627104,0.000016886248,0.000018700672],"genre_scores_gemma":[0.9988853,0.00013831217,0.00036653184,0.0003360119,0.000010821676,0.0000123248865,0.00006232989,0.000013623791,0.00017474797],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9987848,0.00019055285,0.00045038725,0.00027748136,0.000045594927,0.0002511932],"domain_scores_gemma":[0.99946237,0.00011155699,0.00021062446,0.00017356596,0.000014666245,0.000027204978],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00027949348,0.00016488873,0.00035259634,0.00010720164,0.000045946494,0.00001944191,0.00015214754,0.0001337789,0.0006401374],"category_scores_gemma":[0.000008132335,0.000135752,0.000043769793,0.00008671688,0.00019843844,0.00017394111,0.000035361365,0.00008065197,0.00002288639],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000079419144,0.00004157986,0.005190918,0.000038276048,0.000010204322,5.2424474e-7,0.0002608316,0.0000036597326,0.98559266,6.9490596e-7,0.000055033972,0.008726175],"study_design_scores_gemma":[0.000328817,0.000048508442,0.011003815,0.00010254105,0.000014093505,0.0000069146113,0.000017204864,0.0001912551,0.987592,0.0000021723183,0.0005313064,0.00016137758],"about_ca_topic_score_codex":0.0005831778,"about_ca_topic_score_gemma":0.000048383772,"teacher_disagreement_score":0.008564797,"about_ca_system_score_codex":0.000025297732,"about_ca_system_score_gemma":0.000012718031,"threshold_uncertainty_score":0.70090556},"labels":[],"label_agreement":null},{"id":"W4240615266","doi":"10.1016/s0378-1097(00)00139-7","title":"Simple method to identify bacteriocin induction peptides and to auto-induce bacteriocin production at low cell density","year":2000,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Probiotics and Fermented Foods","field":"Agricultural and Biological Sciences","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"Bacteriocin; Enterococcus faecium; Lactococcus lactis; Biology; Microbiology; Secretion; Bacteria; Transformation (genetics); Gene; Biochemistry; Lactic acid; Genetics; Antimicrobial","score_opus":0.012253514951532233,"score_gpt":0.23706176604602403,"score_spread":0.2248082510944918,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4240615266","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9904567,0.000014369759,0.000035599773,0.008565906,0.00030825814,0.0004599403,0.000058600202,0.00007252037,0.000028112045],"genre_scores_gemma":[0.9925744,0.0000132154855,0.0012899777,0.0049859905,0.00030534688,0.000017022201,0.00019075607,0.0000033287251,0.00061995623],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9983139,0.00019524118,0.0002627961,0.0007149944,0.000053901294,0.00045917407],"domain_scores_gemma":[0.9995664,0.000042264466,0.0000741355,0.000113352224,0.00003883565,0.0001650277],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00035804784,0.00023458354,0.0002583791,0.000038218066,0.00034510475,0.00007330059,0.00019564391,0.00018464401,0.00038064717],"category_scores_gemma":[0.000017700997,0.00012179017,0.00006922423,0.000286632,0.00007256064,0.00011341748,0.00015755708,0.00018370127,0.000321121],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000702095,0.000041082003,0.00224983,0.0000061875826,0.000013728598,0.0000031405966,0.00023822542,0.000013931239,0.96219987,6.4858784e-7,0.0031030336,0.032060105],"study_design_scores_gemma":[0.00011939845,0.00025693284,0.39501053,0.000020479853,0.000016900469,0.00008945001,0.00008191988,0.0000026540129,0.5670666,0.0000071420536,0.037001472,0.00032652883],"about_ca_topic_score_codex":0.0002585562,"about_ca_topic_score_gemma":0.0003257601,"teacher_disagreement_score":0.3951333,"about_ca_system_score_codex":0.00010487868,"about_ca_system_score_gemma":0.0000051241136,"threshold_uncertainty_score":0.4966459},"labels":[],"label_agreement":null},{"id":"W4241955806","doi":"10.1111/j.1574-6968.2004.tb09674.x","title":"Mobile DNA elements in the gas vesicle gene cluster of the planktonic cyanobacteria<i>Microcystis aeruginosa</i>","year":2004,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Protist diversity and phylogeny","field":"Biochemistry, Genetics and Molecular Biology","cited_by":10,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Centre National de la Recherche Scientifique; Institut national de la recherche scientifique","keywords":"Microcystis aeruginosa; Cyanobacteria; Bacteria; Cluster (spacecraft); Gene cluster; Chemistry; DNA; Biology; Microbiology; Genetics","score_opus":0.004483358335040843,"score_gpt":0.18996413636870607,"score_spread":0.18548077803366522,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4241955806","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99763787,0.00023014727,0.000088045825,0.0010632705,0.00026197484,0.00045559532,0.00019842411,0.0000046371247,0.000060016475],"genre_scores_gemma":[0.99131423,0.00004856356,0.00023024857,0.008046923,0.0000873404,0.000027859616,0.00021473142,0.000009900956,0.000020206848],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99895257,0.00016229773,0.00023165933,0.00028964246,0.000045052293,0.00031877833],"domain_scores_gemma":[0.9993835,0.000010942939,0.00012567817,0.00044016886,0.000018040852,0.000021678597],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00020624397,0.00015922273,0.0001509799,0.000030241396,0.00010336069,0.00001133218,0.00065918325,0.0001471021,0.000013364944],"category_scores_gemma":[0.00001025397,0.00011032293,0.00011381776,0.00010050859,0.0002663962,0.0000041020644,0.00023217672,0.0001475179,0.000021832177],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000075202355,0.00006674825,0.014175472,0.000008503634,0.00004582764,0.0000051859784,0.00029965234,0.00013795635,0.98283064,0.0000096933345,0.0022512826,0.000093803166],"study_design_scores_gemma":[0.0013511885,0.00016469086,0.015807042,0.00001492098,0.00001943276,0.00010980882,0.000053746826,3.560465e-7,0.96691,0.00002436065,0.015390892,0.00015357425],"about_ca_topic_score_codex":0.00007123828,"about_ca_topic_score_gemma":0.00007684308,"teacher_disagreement_score":0.015920686,"about_ca_system_score_codex":0.000032492124,"about_ca_system_score_gemma":0.000047429046,"threshold_uncertainty_score":0.44988388},"labels":[],"label_agreement":null},{"id":"W4242459915","doi":"10.1111/j.1574-6968.2004.tb09644.x","title":"Cloning, expression, and characterization of 5-aminolevulinic acid synthase from Rhodopseudomonas palustris KUGB306","year":2004,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Porphyrin Metabolism and Disorders","field":"Biochemistry, Genetics and Molecular Biology","cited_by":24,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"Ministry of Education and Human Resources Development; Korea University","keywords":"Biochemistry; Recombinant DNA; Cofactor; Fusion protein; Molecular biology; Affinity chromatography; Rhodopseudomonas palustris; Escherichia coli; ATP synthase; Biology; Enzyme; Expression vector; Chemistry; Gene; Bacteria","score_opus":0.006249913095839561,"score_gpt":0.20846558880390323,"score_spread":0.20221567570806367,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4242459915","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99387234,0.0009930074,0.003909222,0.00048941426,0.00026838432,0.00014242459,0.00028577854,0.0000150485475,0.000024350153],"genre_scores_gemma":[0.9947283,0.00040040675,0.0011117598,0.0017094917,0.00015631724,0.000010763635,0.0018307247,0.000020963962,0.00003124769],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99891305,0.000081281265,0.00029478822,0.00042918394,0.00003551098,0.00024618537],"domain_scores_gemma":[0.9993798,0.000012684702,0.00020007248,0.00031227156,0.00003193323,0.000063210864],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000099889876,0.00019545804,0.0002529196,0.000056589506,0.00006456086,0.000010190505,0.00017820364,0.00023660243,0.00002642242],"category_scores_gemma":[0.000049846505,0.00018448303,0.0000750642,0.000058495294,0.00026123435,0.0000075402377,0.00012184759,0.000102022575,0.000010655217],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010554909,0.000048980804,0.0039756144,0.0000074990216,0.00004317688,0.000003987651,0.00009792691,0.00001183443,0.99487054,0.000008937944,0.00037881234,0.00044715047],"study_design_scores_gemma":[0.0014283662,0.00007319299,0.014485712,0.000026177688,0.000028547518,0.000017491295,0.000033807573,6.3048725e-7,0.9764501,0.000024385467,0.007225651,0.00020595756],"about_ca_topic_score_codex":0.00006027407,"about_ca_topic_score_gemma":0.0000075770204,"teacher_disagreement_score":0.01842045,"about_ca_system_score_codex":0.000006393043,"about_ca_system_score_gemma":0.000035628313,"threshold_uncertainty_score":0.75229996},"labels":[],"label_agreement":null},{"id":"W4242488111","doi":"10.1016/s0378-1097(99)00570-4","title":"Isolation and characterization of Francisella novicida mutants defective in lipopolysaccharide biosynthesis","year":2000,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Bacillus and Francisella bacterial research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Victoria","funders":"","keywords":"Mutant; Francisella; Transposable element; Biology; Gene; Escherichia coli; Transposon mutagenesis; Microbiology; Molecular biology; Francisella tularensis; Genetics; Virulence","score_opus":0.005067898381175615,"score_gpt":0.20852669420271308,"score_spread":0.20345879582153747,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4242488111","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99898475,0.00010562265,0.00023985548,0.0002240218,0.00008496638,0.00018980984,0.00008840769,0.000005357236,0.00007722649],"genre_scores_gemma":[0.99887794,0.00025837493,0.00010692707,0.0004276431,0.00008352684,0.000009785691,0.00017727396,0.000014895339,0.000043609634],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9990879,0.00009770045,0.00022790086,0.0003172048,0.000031545515,0.00023770872],"domain_scores_gemma":[0.9996797,0.000019486199,0.000067074274,0.0001653591,0.00003211656,0.00003627138],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00016310839,0.0001309734,0.0001906238,0.000087430904,0.000039135317,0.000009210685,0.00009931805,0.00018506906,0.00018125163],"category_scores_gemma":[0.000025229903,0.00012753638,0.000043775854,0.00009073779,0.0001575289,0.0000064288856,0.000033052664,0.00008345435,0.000015462985],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002483302,0.00003027581,0.011290766,0.000010397116,0.000023025315,0.0000016965464,0.00009065119,0.000003550214,0.9755396,0.000004287,0.000017921484,0.012739484],"study_design_scores_gemma":[0.0005437802,0.00011269755,0.057478007,0.000018554674,0.0000073347937,0.000018027005,0.000009319554,0.00003418288,0.9395866,0.0000051493357,0.0020297337,0.00015663847],"about_ca_topic_score_codex":0.00007710913,"about_ca_topic_score_gemma":0.00005532369,"teacher_disagreement_score":0.04618724,"about_ca_system_score_codex":0.000013150835,"about_ca_system_score_gemma":0.000018782066,"threshold_uncertainty_score":0.52007824},"labels":[],"label_agreement":null},{"id":"W4243453338","doi":"10.1111/j.1574-6968.2004.tb09753.x","title":"Suppressive subtractive hybridization and differential screening identified genes differentially expressed in yeast and mycelial forms of<i>Ophiostoma piceae</i>","year":2004,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Phytochemical compounds biological activities","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"Suppression subtractive hybridization; Biology; Mycelium; Yeast; Gene; Complementary DNA; cDNA library; Differential display; Genetics; Molecular biology; Botany","score_opus":0.0071666332509842485,"score_gpt":0.20751446753266314,"score_spread":0.2003478342816789,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4243453338","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9957909,0.00025195506,0.0032203447,0.00021758681,0.00010666233,0.00022874378,0.00015466892,0.000012354825,0.000016764969],"genre_scores_gemma":[0.99876547,0.00009414294,0.00031379014,0.00024405238,0.00010152996,0.000022013275,0.00043655475,0.000015958758,0.000006504074],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9988551,0.000076981596,0.00026739156,0.0004717292,0.000043869888,0.00028490587],"domain_scores_gemma":[0.9995651,0.00003414412,0.00015649523,0.00015666617,0.00003464001,0.00005294329],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000054624845,0.00022389916,0.00029713442,0.00007509174,0.000060485632,0.000024691726,0.000147893,0.0002074323,0.0000052737796],"category_scores_gemma":[0.000043918728,0.00019431314,0.00006275546,0.00005592096,0.00041018348,0.000016575434,0.00023338664,0.00014944024,6.832838e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0004014137,0.000068837035,0.0054007624,0.00001990142,0.000058263744,0.000005958634,0.000063959764,0.000024146839,0.9935596,0.00001743716,0.000031275587,0.00034844413],"study_design_scores_gemma":[0.0016096039,0.00014873,0.037148204,0.000034173838,0.000018647303,0.000043687043,0.00004010072,0.0000044154376,0.96047914,0.00015939411,0.000093026676,0.000220848],"about_ca_topic_score_codex":0.00003302428,"about_ca_topic_score_gemma":0.000035736488,"teacher_disagreement_score":0.033080433,"about_ca_system_score_codex":0.0000113289525,"about_ca_system_score_gemma":0.000015774081,"threshold_uncertainty_score":0.792386},"labels":[],"label_agreement":null},{"id":"W4243689169","doi":"10.1016/s0378-1097(01)00513-4","title":"Studies on the production of quorum-sensing signal molecules in Mannheimia haemolytica A1 and other Pasteurellaceae species","year":2002,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Microbial infections and disease research","field":"Immunology and Microbiology","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Quorum sensing; Pasteurellaceae; Microbiology; Biology; Bacteria; Genetics; Biofilm","score_opus":0.047631444260272764,"score_gpt":0.25933833475334606,"score_spread":0.21170689049307329,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4243689169","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9872882,0.0032715327,0.000012337234,0.008244408,0.00047357974,0.00032879022,0.00002593451,0.00002411622,0.0003311119],"genre_scores_gemma":[0.997485,0.000115446324,0.000028031716,0.001329859,0.000050751987,0.000007976045,0.000009207301,0.00001629049,0.00095745374],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9984972,0.00043806236,0.00031823778,0.00035984043,0.00001902097,0.0003676449],"domain_scores_gemma":[0.999265,0.0003103995,0.0001131862,0.00024729618,0.00004927791,0.00001483056],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00032062258,0.0001962998,0.00030545625,0.00021839401,0.00019695485,0.000013969144,0.00011694933,0.00014684338,0.00047727505],"category_scores_gemma":[0.00013821958,0.00013541273,0.00007602474,0.00018070963,0.0012233409,0.000029326222,0.00009139296,0.0003453544,0.00017604984],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007718558,0.000091775975,0.0019243389,0.000019731619,0.00019726963,0.000008190469,0.00073747715,0.000057243727,0.97086227,0.00049440213,0.02509299,0.0004371268],"study_design_scores_gemma":[0.0011031749,0.00032661975,0.0020188568,0.0002725362,0.000074614436,0.0004972771,0.0018880963,0.000018937322,0.9448375,0.00006267985,0.04844671,0.00045295947],"about_ca_topic_score_codex":0.0000474876,"about_ca_topic_score_gemma":0.000089555484,"teacher_disagreement_score":0.02602473,"about_ca_system_score_codex":0.000047671885,"about_ca_system_score_gemma":0.0000098289265,"threshold_uncertainty_score":0.5521971},"labels":[],"label_agreement":null},{"id":"W4244441287","doi":"10.1016/s0378-1097(01)00303-2","title":"A catalase gene of Colletotrichum gloeosporioides f. sp. malvae is highly expressed during the necrotrophic phase of infection of round-leaved mallow, Malva pusilla","year":2001,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Plant Pathogens and Fungal Diseases","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Biology; Catalase; Microbiology; Pathogen; Hydrogen peroxide; Fungus; Fungal pathogen; Host (biology); Gene expression; Gene; Pathogenic fungus; Botany; Colletotrichum; Enzyme; Genetics; Biochemistry","score_opus":0.007914183055838377,"score_gpt":0.21770123490279406,"score_spread":0.20978705184695567,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4244441287","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9960797,0.0008744823,0.00017350796,0.00027442584,0.0001704951,0.00031525877,0.0020794545,0.000009941255,0.000022751163],"genre_scores_gemma":[0.9977618,0.0006725534,0.0001462217,0.0005506075,0.00012021712,0.000021121155,0.00056877476,0.000022580882,0.00013615662],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99864954,0.00011336416,0.000483057,0.00037039918,0.00006817892,0.00031543509],"domain_scores_gemma":[0.99893373,0.000028527322,0.00040233321,0.00047131194,0.000107106505,0.000056984834],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012752466,0.00023647945,0.00037547332,0.00011096846,0.000084333165,0.000007384859,0.00023972784,0.00019329079,0.0000395857],"category_scores_gemma":[0.000041430285,0.00019223476,0.00025449565,0.0002014913,0.00033338947,0.000008802782,0.00012428762,0.00009695824,0.000003732738],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0007939971,0.00022233094,0.044699717,0.0000765635,0.00020449009,0.000031536314,0.000047100035,0.00012118371,0.9524762,0.0000030692825,0.0012686492,0.000055147113],"study_design_scores_gemma":[0.0017785421,0.00029207257,0.04601321,0.000033238986,0.00009138955,0.00015789738,0.000017316599,0.000008200961,0.9473863,0.0000025767006,0.0040184753,0.00020072902],"about_ca_topic_score_codex":0.0002586305,"about_ca_topic_score_gemma":0.000030395126,"teacher_disagreement_score":0.005089865,"about_ca_system_score_codex":0.000019211759,"about_ca_system_score_gemma":0.00005162698,"threshold_uncertainty_score":0.7839106},"labels":[],"label_agreement":null},{"id":"W4244609303","doi":"10.1016/s0378-1097(01)00189-6","title":"Detection of the lst gene in different serogroups and LOS immunotypes of Neisseria meningitidis","year":2001,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Health Canada","funders":"Health Canada","keywords":"Neisseria meningitidis; Neisseria; Microbiology; Gene; Biology; Neisseriaceae; Biovar; Virology; Bacteria; Genetics","score_opus":0.0066990219133749055,"score_gpt":0.1994521271271878,"score_spread":0.1927531052138129,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4244609303","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.997705,0.00075623626,0.000037424525,0.00038851428,0.00088600925,0.0001677241,0.000030883275,0.000013500847,0.000014719085],"genre_scores_gemma":[0.9996858,0.00008970047,0.000009975999,0.00008311276,0.00002583115,0.00001052987,0.000032790664,0.00000909156,0.00005311596],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99914074,0.0001685401,0.0003091017,0.00017850437,0.000003898238,0.00019922768],"domain_scores_gemma":[0.9995457,0.00005875141,0.00016553164,0.00019920689,0.000024342484,0.0000064745477],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000090428184,0.00014156489,0.00028823153,0.000104822866,0.000074697986,0.0000037426555,0.00012297195,0.00018028593,0.00007871281],"category_scores_gemma":[0.00001615696,0.0000951825,0.0000751018,0.00013991958,0.00023870255,0.000038027796,0.0000853695,0.00016347191,0.0000052614414],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012992937,0.000058867037,0.06383139,0.000009390589,0.00008167022,2.5783373e-7,0.00012100941,0.000003232846,0.93498194,0.000016276426,0.000065449545,0.00070059777],"study_design_scores_gemma":[0.000667544,0.000076809105,0.2701484,0.000023610903,0.00002155158,0.00014982597,0.0000339028,4.9219034e-7,0.72711676,0.000009265446,0.0016758275,0.000076019],"about_ca_topic_score_codex":0.00040437735,"about_ca_topic_score_gemma":0.00031764168,"teacher_disagreement_score":0.20786516,"about_ca_system_score_codex":0.00002076631,"about_ca_system_score_gemma":0.0000066732805,"threshold_uncertainty_score":0.38814297},"labels":[],"label_agreement":null},{"id":"W4245091502","doi":"10.1016/s0378-1097(00)00237-8","title":"Genes controlling circadian rhythm are widely distributed in cyanobacteria","year":2000,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Microbial Community Ecology and Physiology","field":"Environmental Science","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"TerraBioGen (Canada)","funders":"","keywords":"Cyanobacteria; Synechococcus; Circadian rhythm; Biology; Gene; Circadian clock; Gene cluster; Genetics; Bacteria; Neuroscience","score_opus":0.0073691713033637325,"score_gpt":0.19242894201804883,"score_spread":0.1850597707146851,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4245091502","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99575686,0.000062793486,0.000056858815,0.0031520603,0.00023557596,0.00021552843,0.0001301212,0.000046731264,0.00034343614],"genre_scores_gemma":[0.98970836,0.000047019195,0.00017108241,0.009349543,0.000059083948,0.000018058843,0.00052772195,0.00001553298,0.00010358018],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99823827,0.00043453983,0.00031954996,0.00038554138,0.000021399328,0.00060068],"domain_scores_gemma":[0.9993632,0.00011741069,0.00010297833,0.00034386697,0.0000040183113,0.00006855633],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00021777085,0.00022350748,0.00036844454,0.00004977188,0.00020353563,0.000013223802,0.00038872007,0.00026115036,0.014585201],"category_scores_gemma":[0.000014946911,0.00022543613,0.00008126143,0.00018628695,0.00054968824,0.00009843666,0.00011171316,0.00040681497,0.0021775153],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010076167,0.00005493068,0.052644126,0.0000024369067,0.000020531377,0.000046472553,0.00018351567,0.0019838077,0.93592244,0.000004510748,0.007921709,0.0011147836],"study_design_scores_gemma":[0.0030921013,0.00016050122,0.63730353,0.00004365865,0.00003269593,0.0004517911,0.00009500886,0.00012510113,0.016923437,0.00020979231,0.34052572,0.0010366446],"about_ca_topic_score_codex":0.0006418975,"about_ca_topic_score_gemma":0.003570588,"teacher_disagreement_score":0.91899896,"about_ca_system_score_codex":0.00015190599,"about_ca_system_score_gemma":0.000008416392,"threshold_uncertainty_score":0.9985994},"labels":[],"label_agreement":null},{"id":"W4245534490","doi":"10.1016/s0378-1097(02)00567-0","title":"Construction and initial characterization of a luminescent Synechococcus sp. PCC 7942 Fe-dependent bioreporter","year":2002,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"bioluminescence and chemiluminescence research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Natural Sciences and Engineering Research Council of Canada; Bowling Green State University; National Science Foundation","keywords":"Bioreporter; Synechococcus; Biology; Vibrio harveyi; Luminescence; Cyanobacteria; Exponential growth; Transcription (linguistics); Vibrio parahaemolyticus; Transcription factor; Microbiology; Biophysics; Reporter gene; Vibrio; Gene; Biochemistry; Bacteria; Gene expression; Materials science; Genetics; Optoelectronics; Physics","score_opus":0.011324819076507096,"score_gpt":0.2302836783100044,"score_spread":0.2189588592334973,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4245534490","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99786115,0.00015418007,0.000440553,0.00090882235,0.0002627393,0.00023737151,0.000064132546,0.000015057101,0.000055976194],"genre_scores_gemma":[0.99793804,0.0003444456,0.00018672939,0.0006320647,0.00026224897,0.000021586544,0.00047745847,0.000019499612,0.000117931435],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.998719,0.00006132935,0.00034904477,0.000459514,0.00006946983,0.00034166724],"domain_scores_gemma":[0.9993535,0.000008021836,0.0001841048,0.0002872367,0.00009254094,0.0000745552],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012264172,0.00020215317,0.00022532213,0.00009278034,0.00006830051,0.000017642598,0.00015684235,0.0002666926,0.00007710585],"category_scores_gemma":[0.00003290574,0.00019009164,0.00007232116,0.0001043756,0.00056041096,0.000012936507,0.00011570456,0.000110022935,0.000013097201],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000047463684,0.00006420637,0.017620537,0.00003959375,0.00003928714,0.00001283134,0.000043027714,1.3600491e-7,0.97828174,0.000003066125,0.0007106268,0.00313746],"study_design_scores_gemma":[0.0005485215,0.00012873788,0.003168588,0.000030086107,0.000019498819,0.0004104512,0.00004052823,0.000008211086,0.9919595,0.0000010572456,0.0034650562,0.0002197778],"about_ca_topic_score_codex":0.000015876558,"about_ca_topic_score_gemma":0.000005446272,"teacher_disagreement_score":0.01445195,"about_ca_system_score_codex":0.000018153993,"about_ca_system_score_gemma":0.000019045496,"threshold_uncertainty_score":0.77517116},"labels":[],"label_agreement":null},{"id":"W4246012493","doi":"10.1016/s0378-1097(99)00603-5","title":"Construction of mini-Tn10luxABcam/Ptac-ATS and its use for developing a bacteriophage that transduces bioluminescence to Escherichia coli O157:H7","year":2000,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Bacteriophages and microbial interactions","field":"Environmental Science","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Health Canada","funders":"","keywords":"Escherichia coli; Bacteriophage; Vibrio harveyi; Biology; Microbiology; Bioluminescence; Prophage; Plasmid; Lysogenic cycle; Luciferase; Transposable element; Virology; Bacteria; Vibrio; Genetics; Gene; Mutant","score_opus":0.018641414292906784,"score_gpt":0.22873939155837106,"score_spread":0.21009797726546428,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4246012493","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9962356,0.000028019864,0.00049228093,0.0020162764,0.00039858985,0.000553343,0.00021467084,0.000030000392,0.000031187494],"genre_scores_gemma":[0.98107374,0.00006971931,0.0151654985,0.003130131,0.000044278975,0.000044030672,0.00006024166,0.000021726843,0.0003906366],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99876696,0.000055565633,0.00030322318,0.0004667635,0.000031936717,0.00037554433],"domain_scores_gemma":[0.9995581,0.00007757511,0.000112267604,0.00015829704,0.00001563935,0.000078119985],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009209572,0.00022751182,0.0002850253,0.00005958365,0.00015715072,0.00004637548,0.00018570822,0.00012810012,0.00081788615],"category_scores_gemma":[0.000017706225,0.00022125906,0.00008204553,0.00016686723,0.00030108873,0.00033591033,0.00005913503,0.000108097374,0.000106736385],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010190242,0.000024598197,0.0014479703,0.000017994069,0.000027733151,0.0000024938804,0.00044849075,0.000009126004,0.9934708,0.000006942126,0.000992427,0.0034495094],"study_design_scores_gemma":[0.00069320045,0.0001493766,0.1230762,0.00009341612,0.000046093286,0.00016721594,0.00008054949,0.000017521983,0.7709143,0.0000028603902,0.10428907,0.00047019921],"about_ca_topic_score_codex":0.00023236136,"about_ca_topic_score_gemma":0.00014663096,"teacher_disagreement_score":0.22255652,"about_ca_system_score_codex":0.00007868733,"about_ca_system_score_gemma":0.000012356763,"threshold_uncertainty_score":0.9022683},"labels":[],"label_agreement":null},{"id":"W4246680834","doi":"10.1016/s0378-1097(02)01176-x","title":"The wbiA locus is required for the 2-O-acetylation of lipopolysaccharides expressed by Burkholderia pseudomallei and Burkholderia thailandensis","year":2003,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Burkholderia infections and melioidosis","field":"Medicine","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Health Sciences Centre; University of Calgary","funders":"","keywords":"Burkholderia pseudomallei; Burkholderia; Microbiology; Acetylation; Mutant; Biology; Monoclonal antibody; Chemistry; Bacteria; Molecular biology; Gene; Antibody; Genetics","score_opus":0.01437535428874646,"score_gpt":0.2407104742901016,"score_spread":0.22633512000135514,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4246680834","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.975181,0.0027752395,0.0031281472,0.016719712,0.000864406,0.0011140829,0.00010159698,0.00005030593,0.0000655003],"genre_scores_gemma":[0.9943384,0.0008508703,0.0005222853,0.003350064,0.00014278793,0.00018564756,0.000050693572,0.00004175656,0.0005175223],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9985272,0.00011638897,0.00045381414,0.0004057173,0.000071359915,0.0004254731],"domain_scores_gemma":[0.998443,0.0005607668,0.00025361148,0.0005508011,0.00011812565,0.00007369823],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005178763,0.0002645958,0.00040734367,0.00007548282,0.0005001539,0.000050030754,0.00015070933,0.00021611003,0.000082192266],"category_scores_gemma":[0.00019306419,0.00015998082,0.00018081054,0.00018455711,0.00057532825,0.000072822004,0.000041401774,0.00018683502,0.000006419253],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000152008,0.000040651634,0.00090313004,0.000029566227,0.00024839625,9.283777e-7,0.00029515635,0.00000343339,0.89873016,0.00012142568,0.0985613,0.0009138602],"study_design_scores_gemma":[0.0026615204,0.00024052325,0.0008042957,0.000057869176,0.00031281784,0.00016818804,0.00042255467,0.000042431955,0.8006973,0.00005462634,0.19430459,0.0002332299],"about_ca_topic_score_codex":0.00014068728,"about_ca_topic_score_gemma":0.000018068047,"teacher_disagreement_score":0.09803279,"about_ca_system_score_codex":0.000036170517,"about_ca_system_score_gemma":0.000044950404,"threshold_uncertainty_score":0.65238285},"labels":[],"label_agreement":null},{"id":"W4246887134","doi":"10.1016/s0378-1097(00)00264-0","title":"Partial characterization of a genomic island associated with the multidrug resistance region of Salmonella enterica Typhymurium DT104","year":2000,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Salmonella and Campylobacter epidemiology","field":"Agricultural and Biological Sciences","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Health Canada","funders":"","keywords":"Prophage; Salmonella enterica; Genetics; Genomic island; Biology; Integrase; Genome; Gene; Direct repeat; Sequence analysis; Open reading frame; Salmonella; Homology (biology); Multiple drug resistance; Whole genome sequencing; Escherichia coli; Drug resistance; Peptide sequence; Bacteriophage; Bacteria","score_opus":0.009733970262436492,"score_gpt":0.17743329497514168,"score_spread":0.16769932471270518,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4246887134","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99503714,0.000056536086,0.000015804353,0.0043894933,0.00007601172,0.00020126201,0.00012631413,0.000021648117,0.000075790864],"genre_scores_gemma":[0.99764484,0.000057958725,0.000011080725,0.0014389842,0.00009853596,0.000011023293,0.00039521992,0.0000021344183,0.00034023714],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9986972,0.0003780266,0.00032526074,0.00028013924,0.000040387542,0.00027894735],"domain_scores_gemma":[0.9992479,0.00023594881,0.00034597478,0.000102588216,0.00003931826,0.00002828144],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00020036654,0.00015643313,0.00033222872,0.0000118867165,0.00008734531,0.0000062405024,0.00026404494,0.0001287769,0.00018727276],"category_scores_gemma":[0.000016147807,0.000057018853,0.000091154616,0.0001599951,0.0003568461,0.0000361193,0.000026546913,0.00011506139,0.00001445964],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00028321805,0.00005010872,0.0177405,0.0000032056503,0.000048915495,0.0000042501897,0.00017649906,0.000007607746,0.97956085,0.0000036181953,0.0013169945,0.00080425036],"study_design_scores_gemma":[0.0005505429,0.00029805076,0.92820203,0.000057743382,0.000054260538,0.000039765426,0.00005572078,0.000015462954,0.043591835,0.00000928685,0.026855046,0.00027027275],"about_ca_topic_score_codex":0.00008120589,"about_ca_topic_score_gemma":0.00024011164,"teacher_disagreement_score":0.935969,"about_ca_system_score_codex":0.000020589074,"about_ca_system_score_gemma":0.0000057795896,"threshold_uncertainty_score":0.23251612},"labels":[],"label_agreement":null},{"id":"W4247947676","doi":"10.1016/j.femsle.2004.06.016","title":"Metabolism of octahydro-1,3,5,7-tetranitro-1,3,5,7-tetrazocine by Clostridium bifermentans strain HAW-1 and several other H2-producing fermentative anaerobic bacteria","year":2004,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Chemical Reactions and Isotopes","field":"Pharmacology, Toxicology and Pharmaceutics","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Biotechnology Research Institute","funders":"Office of Naval Research; Strategic Environmental Research and Development Program; U.S. Navy","keywords":"Formaldehyde; Chemistry; Clostridium; Nitrite; Bacteria; Strain (injury); Microbial metabolism; Anaerobic bacteria; Metabolism; Nitroso; Anaerobic exercise; Biochemistry; Microbiology; Medicinal chemistry; Organic chemistry; Biology; Nitrate","score_opus":0.03349004699231098,"score_gpt":0.33890211546830706,"score_spread":0.3054120684759961,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4247947676","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9916135,0.00061099435,0.00014927889,0.004114733,0.0010578155,0.0004943867,0.0017841478,0.00006912859,0.00010601596],"genre_scores_gemma":[0.9893525,0.00019780887,0.00092384464,0.008521109,0.0002876141,0.000025279256,0.00048416146,0.000048642876,0.00015899107],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99776715,0.00025726683,0.0005824985,0.0006523465,0.00006911953,0.0006716056],"domain_scores_gemma":[0.99908984,0.000169369,0.00025685158,0.00024115118,0.000051238916,0.00019152503],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00033224418,0.00043012097,0.0006081272,0.00016342511,0.00020559174,0.00002123549,0.0002621293,0.00038055645,0.0009483714],"category_scores_gemma":[0.00003501344,0.00040022537,0.00015253958,0.00024819886,0.0008142797,0.00017052561,0.00008971067,0.00078470027,0.000033278244],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00023611574,0.0002912569,0.00068532897,0.000031384723,0.00046386448,0.00001071193,0.0013263674,0.000056424346,0.9887724,0.00009246382,0.0075655887,0.00046811707],"study_design_scores_gemma":[0.004189035,0.0001542111,0.0017124243,0.000027955273,0.00020956331,0.000085457905,0.00028734695,0.000005286362,0.94819504,0.00007615459,0.04464628,0.00041123803],"about_ca_topic_score_codex":0.00019813633,"about_ca_topic_score_gemma":0.000026283395,"teacher_disagreement_score":0.04057733,"about_ca_system_score_codex":0.0001526971,"about_ca_system_score_gemma":0.00005560346,"threshold_uncertainty_score":0.9999649},"labels":[],"label_agreement":null},{"id":"W4248353136","doi":"10.1016/s0378-1097(00)00320-7","title":"Serological cross-reaction between the lipopolysaccharide O-polysaccharide antigens of Escherichia coli O157:H7 and strains of Citrobacter freundii and Citrobacter sedlakii","year":2000,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Escherichia coli research studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute for Biological Sciences","funders":"","keywords":"Citrobacter freundii; Escherichia coli; Antigen; Citrobacter; Epitope; Antiserum; Microbiology; Enterobacteriaceae; Lipopolysaccharide; Biology; Antigenicity; Serology; Chemistry; Molecular biology; Antibody; Biochemistry; Gene","score_opus":0.01226729848148631,"score_gpt":0.2575584351582668,"score_spread":0.2452911366767805,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4248353136","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99757713,0.00036057903,0.00006054831,0.0013211436,0.00007924757,0.00033439902,0.00018911483,0.000014272472,0.000063542764],"genre_scores_gemma":[0.9974503,0.0005549794,0.00034390832,0.0011963247,0.00021459397,0.000021422202,0.0000786852,0.000024603198,0.00011521917],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99821025,0.0002317449,0.00044475574,0.0005325887,0.00008261325,0.0004980187],"domain_scores_gemma":[0.9991504,0.00009029057,0.0002042062,0.00038374306,0.00008319294,0.000088163804],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00038052662,0.00029493406,0.00045160315,0.00006219279,0.00017954923,0.000028081859,0.00029565845,0.00031436142,0.000058149355],"category_scores_gemma":[0.00007299999,0.00021810962,0.00012058831,0.00010421696,0.001586546,0.000014710146,0.000241952,0.00033784914,0.0000038742796],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000119139586,0.000034647364,0.15171717,0.000024207011,0.00029208174,0.0000018632621,0.00011916094,0.0000067264054,0.84687805,0.000010227494,0.0003368723,0.00045983223],"study_design_scores_gemma":[0.00095407985,0.00046454562,0.5917166,0.000020903026,0.00008252506,0.000031988042,0.000059262187,0.0000075353228,0.40238577,0.000024627692,0.003950659,0.0003014994],"about_ca_topic_score_codex":0.00019227245,"about_ca_topic_score_gemma":0.00007344427,"teacher_disagreement_score":0.4444923,"about_ca_system_score_codex":0.000015292713,"about_ca_system_score_gemma":0.00004159168,"threshold_uncertainty_score":0.8894252},"labels":[],"label_agreement":null},{"id":"W4248869402","doi":"10.1016/s0378-1097(00)00315-3","title":"Expression of the tetA(C) tetracycline efflux pump in Escherichia coli confers osmotic sensitivity","year":2000,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Bacterial Genetics and Biotechnology","field":"Biochemistry, Genetics and Molecular Biology","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Robarts Clinical Trials; Western University","funders":"Medical Research Council; Medical Research Council Canada; Cancer Research Society; ALS Association","keywords":"Tetracycline; Escherichia coli; Efflux; Osmotic shock; Aminoglycoside; Chemistry; Biochemistry; Biology; Microbiology; Antibiotics; Gene","score_opus":0.004996611449993473,"score_gpt":0.19701698449963453,"score_spread":0.19202037304964106,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4248869402","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99709135,0.000081366416,0.000033860942,0.002054082,0.0003305775,0.00025451585,0.000052834406,0.000009844025,0.000091582704],"genre_scores_gemma":[0.9971509,0.000078597215,0.00029247362,0.002085785,0.000103735896,0.000007359135,0.00008199157,0.00001853102,0.00018060995],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9986736,0.00024102771,0.00031154256,0.0003982845,0.000035599216,0.0003399358],"domain_scores_gemma":[0.9993258,0.000023831482,0.000114143244,0.00047695788,0.00002588271,0.000033352433],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002075925,0.00020075642,0.0002615831,0.00004717426,0.000055924746,0.0000073253586,0.0002690709,0.0004431595,0.000090000685],"category_scores_gemma":[0.000044216496,0.00015113963,0.000115547075,0.00013596316,0.00048992236,0.0000023253137,0.00014138235,0.0002438864,0.000018447008],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000871888,0.000072726194,0.005771669,0.000008599238,0.000021242275,0.0000037987638,0.000022172237,0.00010635502,0.99254876,0.0000027976373,0.0007274762,0.00062722614],"study_design_scores_gemma":[0.00064686086,0.0000985689,0.028166575,0.000024541787,0.000011499901,0.000031964108,0.0000115504245,0.000008388246,0.9543718,0.0000053048716,0.016454218,0.0001687228],"about_ca_topic_score_codex":0.00005603363,"about_ca_topic_score_gemma":0.000097624055,"teacher_disagreement_score":0.038176943,"about_ca_system_score_codex":0.000016247957,"about_ca_system_score_gemma":0.000040671493,"threshold_uncertainty_score":0.61632955},"labels":[],"label_agreement":null},{"id":"W4248902050","doi":"10.1016/j.femsle.2004.05.005","title":"Differences in biofilm and planktonic cell mediated reduction of metalloid oxyanions","year":2004,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Bacterial biofilms and quorum sensing","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Metalloid; Tellurate; Biofilm; Microbiology; Chemistry; Selenium; Staphylococcus aureus; Pseudomonas aeruginosa; Bacteria; Biology; Organic chemistry; Metal","score_opus":0.007199354232105889,"score_gpt":0.19178186781112497,"score_spread":0.1845825135790191,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4248902050","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9983029,0.00044844096,0.000027868302,0.00081874116,0.00021829989,0.00010106174,0.000041988435,0.0000070563833,0.000033655593],"genre_scores_gemma":[0.9983007,0.00021562185,0.0007828158,0.00030937948,0.00005770728,0.0000026047617,0.00030612267,0.000009446705,0.000015614924],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9992465,0.000051302908,0.00020337594,0.00027236476,0.000017999879,0.00020845355],"domain_scores_gemma":[0.9997273,0.000008170531,0.0000909727,0.00012790781,0.000013967441,0.00003170198],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00008438946,0.00012857847,0.00018741479,0.00007485702,0.000034462737,0.0000065872255,0.00007715482,0.0001794984,0.0000069333537],"category_scores_gemma":[0.000010229702,0.00011457903,0.000042437074,0.00007253265,0.00022465596,0.0000035338544,0.00005347264,0.000088946836,0.0000035396138],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000044553817,0.000034188935,0.0011150019,0.000007652591,0.000023389619,0.0000016315441,0.00006207896,0.000005802802,0.99852765,0.00001176152,0.00010014332,0.00006614125],"study_design_scores_gemma":[0.00072577054,0.0001456444,0.005532902,0.000015015716,0.000011540096,0.000066928806,0.000052716525,6.036442e-7,0.9918967,0.000004075814,0.0014089528,0.00013916439],"about_ca_topic_score_codex":0.00013259635,"about_ca_topic_score_gemma":0.000042439988,"teacher_disagreement_score":0.006630969,"about_ca_system_score_codex":0.000011447335,"about_ca_system_score_gemma":0.000028203325,"threshold_uncertainty_score":0.46723974},"labels":[],"label_agreement":null},{"id":"W4250171191","doi":"10.1111/j.1574-6968.2004.tb09682.x","title":"Multigene phylogenies of<i>Ophiostoma clavigerum</i>and closely related species from bark beetle-attacked<i>Pinus</i>in North America","year":2004,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Forest Insect Ecology and Management","field":"Environmental Science","cited_by":29,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Ophiostoma; Biology; Phylogenetic tree; Bark beetle; Botany; Clade; Gene; Paraphyly; Phylogenetics; Evolutionary biology; Genetics; Fungus; Curculionidae","score_opus":0.004973765602384828,"score_gpt":0.1810525547443262,"score_spread":0.17607878914194136,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4250171191","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99759036,0.00022990235,0.000040827108,0.0010514306,0.0003149535,0.00030643577,0.000094842886,0.000040374765,0.0003308724],"genre_scores_gemma":[0.99287516,0.00014918434,0.001628865,0.004992816,0.000025081996,0.000019619723,0.00015312494,0.000018355748,0.00013779015],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99847955,0.00009900645,0.00039654586,0.00052121264,0.000056648976,0.00044702148],"domain_scores_gemma":[0.99938947,0.000083765946,0.00017338272,0.00029036796,0.000004706986,0.000058313537],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009603104,0.00024475539,0.00035362097,0.000094121846,0.000107610256,0.000007682901,0.0003054839,0.00016426279,0.00048576778],"category_scores_gemma":[0.000020692922,0.00023563678,0.00008200876,0.00030074688,0.0013475679,0.00009113043,0.00027316113,0.00025224785,0.0004561464],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000058865386,0.00009944786,0.08654071,0.0000056208387,0.000068272406,0.00007643817,0.0012828948,0.0028158573,0.90507066,0.000018355817,0.0036761526,0.0002866978],"study_design_scores_gemma":[0.0012578616,0.00014881231,0.96910626,0.000014845208,0.000028835668,0.000023290182,0.00010174349,0.000006028422,0.012647766,0.0001898557,0.01616908,0.00030565262],"about_ca_topic_score_codex":0.0010275737,"about_ca_topic_score_gemma":0.0036737358,"teacher_disagreement_score":0.8924229,"about_ca_system_score_codex":0.00013819175,"about_ca_system_score_gemma":0.000008824689,"threshold_uncertainty_score":0.9608989},"labels":[],"label_agreement":null},{"id":"W4251109967","doi":"10.1093/femsle/fnz130s","title":"Editorial: Microbial food and feed ingredients – reconciling tradition and novelty","year":2019,"lang":"en","type":"editorial","venue":"FEMS Microbiology Letters","topic":"Probiotics and Fermented Foods","field":"Agricultural and Biological Sciences","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph; Canadian Institute for Public Safety Research and Treatment","funders":"","keywords":"Novelty; Food science; Novel food; Biotechnology; Chemistry; Biology; Philosophy","score_opus":0.009009352546530425,"score_gpt":0.1893519823429764,"score_spread":0.18034262979644597,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4251109967","genre_codex":"editorial","genre_gemma":"editorial","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"editorial","genre_consensus":"editorial","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.38339245,0.000205176,9.700632e-7,0.0005709361,0.6136493,0.00028212438,0.0018365682,0.00004357688,0.000018894918],"genre_scores_gemma":[0.033501938,0.00020717083,0.000059263137,0.0005619576,0.9606987,0.0000114830455,0.004886795,0.000007369678,0.00006532353],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9979362,0.00011929625,0.00040678002,0.000894038,0.00012093546,0.0005227501],"domain_scores_gemma":[0.9989126,0.0004809387,0.00030275554,0.00009945252,0.00009516817,0.00010914184],"candidate_categories":["research_integrity"],"consensus_categories":[],"category_scores_codex":[0.0003686016,0.00045511714,0.000580215,0.000043713866,0.00023858316,0.0001376159,0.00030213615,0.0015095721,0.000021786629],"category_scores_gemma":[0.00012222485,0.00022715156,0.000116800715,0.000110960915,0.00026569437,0.00010116474,0.00020659983,0.0009191715,0.000021688405],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000413075,0.000018376308,0.000032682292,0.000018261351,0.00005100126,8.160881e-7,0.000029276482,1.3491835e-7,0.4857682,0.0000016499071,0.5134259,0.0006124171],"study_design_scores_gemma":[0.000769975,0.0006906117,0.00021315177,0.00012286876,0.000064977685,0.000016192962,0.000030878,0.000001563515,0.0018283424,0.000021078136,0.9956936,0.0005467506],"about_ca_topic_score_codex":0.00009009667,"about_ca_topic_score_gemma":0.00010311097,"teacher_disagreement_score":0.48393986,"about_ca_system_score_codex":0.000093654686,"about_ca_system_score_gemma":0.00003165507,"threshold_uncertainty_score":0.9997867},"labels":[],"label_agreement":null},{"id":"W4251178834","doi":"10.1016/s0378-1097(01)00115-x","title":"Assessment of the serodiagnostic potential of nine novel proteins from Mycobacterium tuberculosis","year":2001,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Tuberculosis Research and Epidemiology","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Victoria","funders":"Medical Research Council; Medical Research Council Canada; British Columbia Lung Association","keywords":"Mycobacterium tuberculosis; Tuberculosis; Microbiology; Virology; Bacterial protein; Biology; Computational biology; Bacteria; Medicine; Pathology; Genetics","score_opus":0.01492465502722554,"score_gpt":0.2797339318184568,"score_spread":0.26480927679123123,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4251178834","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.96901584,0.00013371074,0.0009354206,0.028423512,0.0003980419,0.0006491466,0.00027759763,0.000020213542,0.00014651798],"genre_scores_gemma":[0.99183756,0.000103760554,0.0020226173,0.0054076635,0.00022019098,0.000041347233,0.00027089403,0.000021273268,0.00007470502],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99819094,0.0002706793,0.0005688547,0.00037635406,0.00011201014,0.00048114307],"domain_scores_gemma":[0.99865067,0.00029777444,0.00024383927,0.00059281255,0.00011542124,0.00009949805],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00034266958,0.0002072967,0.0006542809,0.00012259922,0.000058886526,0.0000037232944,0.00028559798,0.00021261997,0.00044563218],"category_scores_gemma":[0.00036271574,0.0001372333,0.00027618697,0.00023205524,0.00053641404,0.000038107493,0.00018877439,0.0004226679,0.00001664819],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009835987,0.0002138224,0.27812892,0.000029768766,0.00028650547,0.00001412096,0.000023078823,0.00005480075,0.7167296,0.000011827309,0.0042999336,0.00010926772],"study_design_scores_gemma":[0.0015803598,0.00028605113,0.93063474,0.00012361513,0.00016173146,0.0002080614,0.000020908385,0.000082785526,0.06419169,0.000006315347,0.002580675,0.00012304634],"about_ca_topic_score_codex":0.0015964833,"about_ca_topic_score_gemma":0.000087901535,"teacher_disagreement_score":0.6525379,"about_ca_system_score_codex":0.00008287009,"about_ca_system_score_gemma":0.000103093545,"threshold_uncertainty_score":0.5596212},"labels":[],"label_agreement":null},{"id":"W4251683350","doi":"10.1016/s0378-1097(01)00005-2","title":"Phylogenetic relationship of Ophiostoma piliferum to other sapstain fungi based on the nuclear rRNA gene","year":2001,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Plant Disease Resistance and Genetics","field":"Agricultural and Biological Sciences","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Natural Sciences and Engineering Research Council of Canada; Studienstiftung des Deutschen Volkes; FPInnovations","keywords":"Ophiostoma; Internal transcribed spacer; Biology; Phylogenetic tree; HaeIII; Ribosomal RNA; Genetics; Gene; Spacer DNA; Restriction fragment length polymorphism; Polymerase chain reaction; Botany; Fungus","score_opus":0.016189573105582465,"score_gpt":0.19342553778465446,"score_spread":0.177235964679072,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4251683350","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.979831,0.0001302994,0.000010113364,0.019314798,0.00006712164,0.0002262676,0.00022302463,0.00002409744,0.00017331036],"genre_scores_gemma":[0.97784007,0.000012499171,0.00007536428,0.021831375,0.000104912935,0.000008949143,0.000059355414,0.0000021917506,0.00006530292],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9990769,0.00015273025,0.00017629821,0.00024574433,0.000059952054,0.00028839576],"domain_scores_gemma":[0.9994103,0.0003102556,0.00007020572,0.00012111933,0.000022441805,0.00006569239],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014655227,0.00013608889,0.00014315051,0.00002277476,0.00014872057,0.000012958697,0.00029193392,0.00008680101,0.00023804832],"category_scores_gemma":[0.000033573964,0.000052199575,0.000090868416,0.0002441759,0.00010258341,0.000010518113,0.000030880605,0.00009266387,0.00017145564],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000102080994,0.000041780673,0.033254843,0.0000017232093,0.0000117029795,0.000007590544,0.00001986089,0.00038787766,0.9589415,0.000047268546,0.0065441593,0.0006395885],"study_design_scores_gemma":[0.0002836261,0.0004231779,0.86351913,0.0000475101,0.000031502896,0.000022241045,0.000095497155,0.00008905444,0.029888814,0.000091853486,0.105130285,0.00037730773],"about_ca_topic_score_codex":0.000025212095,"about_ca_topic_score_gemma":0.00011499693,"teacher_disagreement_score":0.9290527,"about_ca_system_score_codex":0.000018749519,"about_ca_system_score_gemma":0.000006239314,"threshold_uncertainty_score":0.26064622},"labels":[],"label_agreement":null},{"id":"W4251700748","doi":"10.1016/s0378-1097(02)00519-0","title":"Identification of lysine-78 as an essential residue in the Saccharomyces cerevisiae xylose reductase","year":2002,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Polyamine Metabolism and Applications","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"","keywords":"Biochemistry; Saccharomyces cerevisiae; Xylose; Enzyme; Active site; Residue (chemistry); Aldehyde Reductase; Yeast; Chemistry; Reductase; Site-directed mutagenesis; Aldo-keto reductase; Lysine; Stereochemistry; Amino acid; Mutant; Fermentation","score_opus":0.007402488945921589,"score_gpt":0.2422983328823336,"score_spread":0.23489584393641202,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4251700748","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9949577,0.0007847556,0.00013136698,0.0036408554,0.00010211232,0.00021849299,0.000092491,0.000006816131,0.00006544066],"genre_scores_gemma":[0.99730664,0.00016857049,0.00010932043,0.0014623482,0.00024776888,0.0000393008,0.0005240346,0.000011394373,0.0001306087],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99891365,0.00018768858,0.0003271662,0.00033489382,0.000037993683,0.0001985835],"domain_scores_gemma":[0.99921006,0.000014538,0.0001611291,0.00055884913,0.000028530803,0.00002691012],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002289728,0.00012721229,0.00014899317,0.00006988786,0.00006511583,0.00001672842,0.00041747637,0.00010988012,0.00004287086],"category_scores_gemma":[0.00004033234,0.00010259975,0.00006514651,0.00015335661,0.00022025617,0.0000075653566,0.00004648898,0.00009486736,0.000043545835],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000013699898,0.00011170788,0.00028756243,0.000005580615,0.000018016051,0.000002013911,0.00017527775,0.000010118542,0.9898976,0.00012672861,0.008876262,0.00047541488],"study_design_scores_gemma":[0.00035858774,0.00004937356,0.0031122633,0.0000051205075,0.000028930739,0.0000652452,0.00011312525,0.0000108044405,0.98339355,0.00004736242,0.012671509,0.00014414544],"about_ca_topic_score_codex":0.00006082597,"about_ca_topic_score_gemma":0.00002671246,"teacher_disagreement_score":0.0065040844,"about_ca_system_score_codex":0.0000048641436,"about_ca_system_score_gemma":0.000011221169,"threshold_uncertainty_score":0.41838962},"labels":[],"label_agreement":null},{"id":"W4251775574","doi":"10.1016/s0378-1097(01)00445-1","title":"Selection of peptides that bind to the core oligosaccharide of R-form LPS from a phage-displayed heptapeptide library","year":2001,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"University of Calgary","keywords":"Biopanning; Phage display; Oligosaccharide; Mimotope; Peptide library; Molecular biology; Biology; Lipopolysaccharide; Ligand (biochemistry); Phagemid; Lectin; Panning (audio); Biochemistry; Bacteriophage; Chemistry; Escherichia coli; Peptide; Peptide sequence; Receptor; Gene","score_opus":0.014150549834938332,"score_gpt":0.21602826923143068,"score_spread":0.20187771939649235,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4251775574","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9947755,0.0006338625,0.00023179782,0.0029377537,0.00061887846,0.0004223911,0.00014144124,0.000061947416,0.0001764418],"genre_scores_gemma":[0.99537194,0.00016629006,0.00021973527,0.0023593046,0.00007132771,0.00002946828,0.00074407033,0.000027220556,0.0010106332],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9984104,0.0002734027,0.0005400221,0.00032810704,0.000027051385,0.00042102058],"domain_scores_gemma":[0.9987996,0.00038086108,0.0003713756,0.00038449364,0.000043254633,0.000020396124],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00023993826,0.000255564,0.00044253378,0.00024290805,0.00016487655,0.0000109535,0.00046299477,0.00030379777,0.0009550117],"category_scores_gemma":[0.000061603125,0.0001892386,0.00018496666,0.00030807435,0.0003254875,0.000212617,0.00014372675,0.00031095848,0.00045018573],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00097273826,0.000050016275,0.01452018,0.000010675291,0.00030639625,0.0000041804055,0.0010479884,0.000023990766,0.9474997,0.000040714982,0.033932813,0.0015905971],"study_design_scores_gemma":[0.0008310006,0.00018915816,0.031715285,0.00007152692,0.000061292616,0.00013837025,0.00023127031,0.000003700658,0.9128262,0.000024546474,0.05371621,0.00019145002],"about_ca_topic_score_codex":0.000404362,"about_ca_topic_score_gemma":0.00012134435,"teacher_disagreement_score":0.03467352,"about_ca_system_score_codex":0.000032535932,"about_ca_system_score_gemma":0.00006690163,"threshold_uncertainty_score":0.9999583},"labels":[{"model":"gemma","categories":[],"domain":null,"study_design":"bench_or_experimental","genre":"empirical","about_ca_system":false,"about_ca_topic":false,"confidence":"low"},{"model":"gpt","categories":[],"domain":null,"study_design":"bench_or_experimental","genre":"empirical","about_ca_system":false,"about_ca_topic":false,"confidence":"high"}],"label_agreement":"agree"},{"id":"W4253395857","doi":"10.1016/s0378-1097(01)00362-7","title":"Predicting the emergence of resistance to antifungal drugs","year":2001,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Biology; Fitness landscape; Context (archaeology); Genetics; Genome; Gene; Human evolutionary genetics; Resistance (ecology); Antifungal; Adaptation (eye); Antifungal drug; Genetic Fitness; Allele; Drug resistance; Adaptive evolution; Evolutionary biology; Ecology; Population; Microbiology","score_opus":0.011832308723272353,"score_gpt":0.2580882416127926,"score_spread":0.24625593288952025,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4253395857","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9842012,0.00035307897,0.00043609858,0.012764602,0.00030087042,0.00034025402,0.000026136107,0.000038709233,0.001539052],"genre_scores_gemma":[0.9913903,0.00005190225,0.0004116194,0.0064092237,0.00013778878,0.000009375176,0.000018535435,0.000013276041,0.0015580116],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.998778,0.00008433499,0.00035286724,0.0003412676,0.000084831816,0.00035871842],"domain_scores_gemma":[0.99913454,0.00011588285,0.0001051507,0.0004889994,0.00008389134,0.00007151211],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00040063582,0.00014296714,0.00029355302,0.000058903093,0.00012193684,0.000004892691,0.00021366171,0.0000823826,0.0002148],"category_scores_gemma":[0.00016247621,0.00009832076,0.0001209771,0.00030501993,0.00030853497,0.000035822402,0.000059647784,0.00022665421,0.000064140055],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00028852158,0.000027745424,0.27540526,0.000024886707,0.00003338747,0.000019657358,0.000503462,0.0000037382974,0.6966776,0.000019898655,0.026827808,0.00016803475],"study_design_scores_gemma":[0.0012389654,0.00027837403,0.8004353,0.00039657994,0.0001463028,0.0001581838,0.0025740077,0.0000138399355,0.12742269,0.000027844118,0.066896506,0.00041141213],"about_ca_topic_score_codex":0.000045743072,"about_ca_topic_score_gemma":0.00011156831,"teacher_disagreement_score":0.56925493,"about_ca_system_score_codex":0.000028764283,"about_ca_system_score_gemma":0.000042236476,"threshold_uncertainty_score":0.40094042},"labels":[],"label_agreement":null},{"id":"W4253462346","doi":"10.1016/s0378-1097(00)00036-7","title":"A second tonB gene in Pseudomonas aeruginosa is linked to the exbB and exbD genes","year":2000,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Bacterial biofilms and quorum sensing","field":"Biochemistry, Genetics and Molecular Biology","cited_by":10,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Queen's University","funders":"Medical Research Council Canada; Cystic Fibrosis Foundation","keywords":"Biology; Complementation; Hemin; Gene; Escherichia coli; Mutant; Pseudomonas aeruginosa; Genetics; Molecular biology; Microbiology; Heme; Biochemistry; Bacteria","score_opus":0.005965326203479242,"score_gpt":0.20237660170002422,"score_spread":0.19641127549654497,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4253462346","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9857976,0.0006731099,0.0000104444935,0.01279889,0.00025421503,0.00023503121,0.00009135691,0.000010028159,0.00012933627],"genre_scores_gemma":[0.96707046,0.00018459439,0.0007199694,0.030571975,0.00042569212,0.0000126930545,0.00018050188,0.000022186117,0.00081190566],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99879086,0.00009161091,0.00022057244,0.0004759386,0.000028602948,0.00039242557],"domain_scores_gemma":[0.9995286,0.000013433036,0.000041119016,0.00032935519,0.000022461212,0.00006506419],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00017149873,0.00020422277,0.00019286724,0.00004663011,0.00009828653,0.000033865872,0.00018102859,0.00021715234,0.00022607656],"category_scores_gemma":[0.00000964814,0.0001598904,0.00006252232,0.00008366916,0.00014446618,0.0000036709362,0.00009966758,0.00012686003,0.000066874425],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000089897905,0.000013274012,0.00076387817,0.0000032208077,0.00002981793,0.000010027724,0.0002114557,0.000008819976,0.9771896,0.0000014383122,0.014703547,0.006975011],"study_design_scores_gemma":[0.0004357516,0.00007420885,0.0060025016,0.0000073629963,0.0000074874824,0.00016663417,0.000024580557,0.0000023546934,0.53630716,0.0000014466946,0.4567562,0.00021428915],"about_ca_topic_score_codex":0.00007268993,"about_ca_topic_score_gemma":0.00025643792,"teacher_disagreement_score":0.44205266,"about_ca_system_score_codex":0.000011842251,"about_ca_system_score_gemma":0.000019326691,"threshold_uncertainty_score":0.65201414},"labels":[],"label_agreement":null},{"id":"W4254050396","doi":"10.1016/s0378-1097(01)00534-1","title":"Identification of enteric pathogens by heat shock protein 60 kDa (HSP60) gene sequences","year":2002,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Viral gastroenteritis research and epidemiology","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Vancouver Hospital and Health Sciences Centre","funders":"Vancouver Foundation","keywords":"Biology; Campylobacter jejuni; Yersinia; Hypervariable region; Campylobacter; Microbiology; Shigella; Heat shock protein; Salmonella; Escherichia coli; Yersinia enterocolitica; HSP60; Gene; Enterobacteriaceae; Bacteria; Vibrio cholerae; Restriction enzyme; Genetics; Hsp70","score_opus":0.01982679401128492,"score_gpt":0.2590914983500574,"score_spread":0.23926470433877248,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4254050396","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98198813,0.0007290826,0.00089812675,0.015391972,0.00015479984,0.0005317804,0.0002334319,0.00003827704,0.000034373577],"genre_scores_gemma":[0.9939505,0.00020930244,0.0005031636,0.0037899371,0.00009510269,0.000071043134,0.00038294445,0.00001896848,0.0009790511],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99809444,0.0002986155,0.0005711716,0.0004138387,0.000070100024,0.00055180624],"domain_scores_gemma":[0.9993464,0.000017903958,0.00013076898,0.00032353235,0.00006011987,0.00012127597],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003060019,0.000180997,0.0004545031,0.00013361724,0.00006220019,0.000008592994,0.00019995877,0.00013817196,0.0004211303],"category_scores_gemma":[0.0001262959,0.00014005315,0.00013629872,0.00013856696,0.00045827954,0.00006074347,0.000062365216,0.00023962407,0.00020139832],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000808931,0.00009317299,0.0066455966,0.000042010866,0.00007122365,0.000065271284,0.00006694448,0.0000054500024,0.94449586,0.0000013456677,0.04771837,0.0007138773],"study_design_scores_gemma":[0.002814088,0.0018719394,0.0110839605,0.00017454546,0.00007744681,0.0017332141,0.000097356555,0.00044209178,0.9451958,0.000013228685,0.036089897,0.0004064505],"about_ca_topic_score_codex":0.00006768299,"about_ca_topic_score_gemma":0.0000071046056,"teacher_disagreement_score":0.011962331,"about_ca_system_score_codex":0.0000803087,"about_ca_system_score_gemma":0.000011716072,"threshold_uncertainty_score":0.5711202},"labels":[],"label_agreement":null},{"id":"W4254779871","doi":"10.1016/s0378-1097(02)00893-5","title":"Impact of feed processing and mixed ruminal culture on the fate of recombinant EPSP synthase and endogenous canola plant DNA","year":2002,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"CRISPR and Genetic Engineering","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta; Agriculture and Agri-Food Canada","funders":"Natural Sciences and Engineering Research Council of Canada; Canadian Food Inspection Agency","keywords":"Canola; Recombinant DNA; Biology; Endogeny; Rumen; Biochemistry; DNA; DNA shuffling; Exogenous DNA; Genetically modified organism; Food science; Gene; Fermentation; Mutant","score_opus":0.011564532438143295,"score_gpt":0.23257101757314236,"score_spread":0.22100648513499907,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4254779871","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9974477,0.0019487592,0.00007486397,0.0002284746,0.00007371288,0.0001230565,0.000073273775,0.0000038605276,0.000026241423],"genre_scores_gemma":[0.99944043,0.00023216291,0.0000782537,0.00013352091,0.000027451442,0.000004638906,0.00004578812,0.000010775683,0.000026993603],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.999388,0.000039761515,0.00015567307,0.00020342422,0.000021151027,0.00019198847],"domain_scores_gemma":[0.99970096,0.000017472565,0.00008461076,0.0001460807,0.000017470662,0.000033420358],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000075790864,0.00014470016,0.00017465072,0.000032694505,0.000052777763,0.0000064160913,0.000088378656,0.00010254526,0.000006453668],"category_scores_gemma":[0.0000214953,0.000094208604,0.000055575434,0.000036935973,0.00017340289,0.0000015324051,0.000044175285,0.00008619167,5.211594e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000049505416,0.000032023156,0.0016895335,0.0000284224,0.000070136186,0.0000051372613,0.0003005555,0.000036174988,0.99509126,0.0000014327103,0.0014159405,0.0012798874],"study_design_scores_gemma":[0.0004921051,0.0005210572,0.004247835,0.00005190189,0.000029672054,0.00036547633,0.00008001706,0.000044729837,0.9933508,0.0000013651935,0.0006698131,0.00014523944],"about_ca_topic_score_codex":0.00003380585,"about_ca_topic_score_gemma":0.00000891492,"teacher_disagreement_score":0.0025583012,"about_ca_system_score_codex":0.0000075946214,"about_ca_system_score_gemma":0.000009013076,"threshold_uncertainty_score":0.38417152},"labels":[],"label_agreement":null},{"id":"W4255443768","doi":"10.1016/s0378-1097(99)00625-4","title":"Mannanase Man26A from Cellulomonas fimi has a mannan-binding module","year":2000,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Carbohydrate Chemistry and Synthesis","field":"Chemistry","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Mannan; Chitin; Locust bean gum; Chemistry; Xylan; Cellulose; Biochemistry; Carbohydrate-binding module; Glycoside hydrolase; Cellulase; Polysaccharide; Chitosan; Enzyme; Materials science","score_opus":0.014226690193050602,"score_gpt":0.19026378878980169,"score_spread":0.1760370985967511,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4255443768","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98670447,0.00023991641,0.000009841748,0.0040489943,0.00017585864,0.000063619984,0.00063470256,0.00018876418,0.0079338495],"genre_scores_gemma":[0.9859272,0.0000419449,0.0003366618,0.0021356998,0.0004935996,0.000035791087,0.0014225553,0.00006232997,0.009544167],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9980241,0.00004164457,0.00040019696,0.0007755309,0.00007071962,0.0006878125],"domain_scores_gemma":[0.9986537,0.00012929294,0.000114817594,0.0009472811,0.000016639142,0.00013825783],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00008542861,0.00040730997,0.0004163993,0.000053754688,0.00026254787,0.000078406774,0.00069539604,0.00039485522,0.023485886],"category_scores_gemma":[0.00002418246,0.00042024362,0.00026266478,0.00010712319,0.0003426044,0.00008452283,0.00011021669,0.00040403978,0.0015618558],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000079198515,0.00006691352,0.00047787646,0.00002806875,0.0001317126,0.00026245136,0.00022958506,0.000041262025,0.95858675,0.0000013671474,0.038571216,0.0015235986],"study_design_scores_gemma":[0.00052530854,0.000005791542,0.00005995292,0.00005736143,0.000054817097,0.000071225935,0.00006770611,0.000045695233,0.8768445,0.000033576678,0.12176873,0.00046533774],"about_ca_topic_score_codex":0.00028487263,"about_ca_topic_score_gemma":0.00002088177,"teacher_disagreement_score":0.08319751,"about_ca_system_score_codex":0.00012231027,"about_ca_system_score_gemma":0.000025588162,"threshold_uncertainty_score":0.99982494},"labels":[],"label_agreement":null},{"id":"W4256323967","doi":"10.1016/s0378-1097(01)00137-9","title":"PCR cloning of type II polyhydroxyalkanoate biosynthesis genes from two Pseudomonas strains","year":2001,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"biodegradable polymer synthesis and properties","field":"Materials Science","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Natural Science Foundation of China; Public Health Agency of Canada","keywords":"Polyhydroxyalkanoates; ORFS; Cloning (programming); Pseudomonas; Biology; Gene; Escherichia coli; Molecular cloning; Open reading frame; Biochemistry; genomic DNA; Genetics; Molecular biology; Microbiology; Bacteria; Peptide sequence","score_opus":0.023000017507296078,"score_gpt":0.22421468805168368,"score_spread":0.2012146705443876,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4256323967","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9863922,0.009106353,0.00009792684,0.002943428,0.0009108273,0.00009362782,0.000170606,0.0000852894,0.0001997233],"genre_scores_gemma":[0.9953433,0.00021894173,0.0023876086,0.0015474912,0.0002366629,0.0000056884596,0.00004030684,0.00003079857,0.00018920079],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9982697,0.00020781963,0.0004370535,0.00048437752,0.00007326567,0.00052782876],"domain_scores_gemma":[0.9991147,0.00012297626,0.0002222486,0.00043212774,0.00003939438,0.00006854755],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00026895985,0.000276815,0.00045777953,0.000112650065,0.00027750654,0.000033651533,0.0005004122,0.00015251843,0.001758468],"category_scores_gemma":[0.000032197462,0.00021814868,0.00012363333,0.00015952828,0.0004801428,0.00011315755,0.00016673146,0.00012123794,0.00023169826],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010084323,0.00003571002,0.0018577587,0.0000060218817,0.000057514077,0.000013595094,0.00037526226,0.000011153576,0.98957837,0.000020109104,0.0008161224,0.0071275607],"study_design_scores_gemma":[0.00026739342,0.000073991425,0.0004266365,0.00004806093,0.00004538413,0.000044159315,0.00007027485,0.000022173455,0.98909867,0.000018218669,0.009605431,0.00027961403],"about_ca_topic_score_codex":0.0025256933,"about_ca_topic_score_gemma":0.00011359875,"teacher_disagreement_score":0.008951083,"about_ca_system_score_codex":0.000029158247,"about_ca_system_score_gemma":0.000040349118,"threshold_uncertainty_score":0.99915403},"labels":[],"label_agreement":null},{"id":"W4256491230","doi":"10.1016/s0378-1097(00)00463-8","title":"Production of green fluorescent protein by the methylotrophic bacterium Methylobacterium extorquens","year":2000,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Microbial metabolism and enzyme function","field":"Biochemistry, Genetics and Molecular Biology","cited_by":11,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Biotechnology Research Institute","funders":"","keywords":"Green fluorescent protein; Electroporation; Plasmid; Promoter; Methylobacterium; Chemistry; Biology; Expression vector; Molecular biology; Gene; Gene expression; Recombinant DNA; Biochemistry","score_opus":0.005362091602580034,"score_gpt":0.19308793476945388,"score_spread":0.18772584316687385,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4256491230","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99377424,0.00068764715,0.00010975387,0.003999633,0.00074173877,0.00048411347,0.00015196641,0.000020300131,0.00003061579],"genre_scores_gemma":[0.99058473,0.0001775183,0.00049040973,0.0027284643,0.0009542086,0.000076124525,0.00089595513,0.000049205326,0.0040433663],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9984599,0.00031335608,0.0003334109,0.00048710205,0.000050150797,0.00035611738],"domain_scores_gemma":[0.99920565,0.000006278016,0.0001444099,0.0005377574,0.000059865986,0.000046060464],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00028011113,0.00024072756,0.00024360915,0.00004252446,0.00010609954,0.00001002249,0.00029855387,0.00020256088,0.0002215813],"category_scores_gemma":[0.000029850087,0.00017865447,0.0001361363,0.00012535311,0.0003212721,0.0000078907315,0.000062090956,0.00017183555,0.00005479684],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00022060976,0.00005068171,0.00006955298,0.00001682787,0.00008081155,6.589453e-7,0.000058593774,0.000012835431,0.9412513,0.0000028225475,0.05550479,0.0027305055],"study_design_scores_gemma":[0.00024350235,0.00009659199,0.00070608617,0.000008810375,0.000028698987,0.00004225264,0.000009347193,3.692545e-7,0.72639316,0.0000023986318,0.27231923,0.00014955239],"about_ca_topic_score_codex":0.00024215746,"about_ca_topic_score_gemma":0.000023528557,"teacher_disagreement_score":0.21681443,"about_ca_system_score_codex":0.000017144746,"about_ca_system_score_gemma":0.000025419722,"threshold_uncertainty_score":0.7285318},"labels":[],"label_agreement":null},{"id":"W4283446822","doi":"10.1093/femsle/fnac057","title":"Dark stress for improved lipid quantity and quality in bioprospected acid-tolerant green microalgae","year":2022,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Algal biology and biofuel production","field":"Energy","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Laurentian University","funders":"","keywords":"Polyunsaturated fatty acid; Flue gas; Biomass (ecology); Chemistry; Nitrogen; Carbon fibers; Food science; Carbon-to-nitrogen ratio; Fatty acid; Photosynthesis; Botany; Animal science; Pulp and paper industry; Biology; Biochemistry; Ecology; Materials science; Organic chemistry","score_opus":0.01614873095805743,"score_gpt":0.24008238089678435,"score_spread":0.22393364993872691,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4283446822","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9912384,0.00043426047,0.00010524035,0.0059878426,0.0009935262,0.00050962536,0.0006174284,0.00009134644,0.000022297143],"genre_scores_gemma":[0.99408954,0.00001546281,0.0005069826,0.0035931445,0.0002315834,0.00012981106,0.0012624132,0.00002188285,0.00014918184],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9979399,0.0003842288,0.00043414385,0.00072433945,0.00002863953,0.00048875134],"domain_scores_gemma":[0.9993424,0.00007871338,0.00019441645,0.00030763668,0.000035586396,0.000041258587],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00060113723,0.00024295568,0.00039698332,0.00014704041,0.00036482693,0.000014093306,0.00025917953,0.00020192415,0.00008014013],"category_scores_gemma":[0.000046067704,0.00022939466,0.00009390371,0.0002139215,0.00034319257,0.000067953406,0.00021385927,0.0004286338,0.0000085504225],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00061161304,0.00009503068,0.04099161,0.000035092093,0.00007025201,0.0000032503115,0.00021890795,0.000019538375,0.9555138,0.00034968817,0.00081987545,0.0012713404],"study_design_scores_gemma":[0.009021425,0.0011338925,0.35457954,0.00003112763,0.00011058345,0.00029151238,0.0006742806,0.00012136131,0.5554575,0.0008815339,0.07573118,0.0019660704],"about_ca_topic_score_codex":0.0050456915,"about_ca_topic_score_gemma":0.0035779409,"teacher_disagreement_score":0.4000563,"about_ca_system_score_codex":0.00012609328,"about_ca_system_score_gemma":0.000025441757,"threshold_uncertainty_score":0.9354443},"labels":[],"label_agreement":null},{"id":"W4288040187","doi":"10.1093/femsle/fnac067","title":"<i>Aeromonas salmonicida</i> intraspecies divergence revealed by the various strategies displayed when grazed by <i>Tetrahymena pyriformis</i>","year":2022,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Vibrio bacteria research studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval; Institut universitaire de cardiologie et de pneumologie de Québec","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Biology; Aeromonas salmonicida; Ciliate; Psychrophile; Microbiology; Mesophile; Tetrahymena; Bacteria; Aeromonas; Ribotyping; Predation; Zoology; Ecology; Genetics; Gene","score_opus":0.005134768655385876,"score_gpt":0.21064140048836166,"score_spread":0.2055066318329758,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4288040187","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98425406,0.0034838987,0.0003507054,0.009166399,0.00050324504,0.00054317265,0.0014364823,0.00004746716,0.00021456135],"genre_scores_gemma":[0.9883799,0.0004635615,0.0000958848,0.007124788,0.0001424867,0.00028328603,0.0022627597,0.000048934347,0.0011983963],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.99739975,0.00046173637,0.00038397682,0.0007351512,0.0001642015,0.0008552146],"domain_scores_gemma":[0.9989725,0.000075882745,0.00018598976,0.0006293264,0.00004959657,0.00008675655],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00039829753,0.00039297403,0.00034817107,0.000044663095,0.0009176928,0.0000857346,0.0011062999,0.0001288657,0.00015532614],"category_scores_gemma":[0.000049573006,0.0003083608,0.00016890894,0.00015944673,0.0007791966,0.000015436266,0.0010938575,0.0005020066,0.000022557366],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012875818,0.00004939388,0.00091828336,0.0000059741624,0.00017059252,0.000008974007,0.00019117269,0.000017376758,0.5920138,0.000011823795,0.40640825,0.00007561347],"study_design_scores_gemma":[0.0014466563,0.0007068372,0.0012161771,0.000007428747,0.000058269892,0.00022564328,0.000949466,0.0000043944824,0.2919283,0.000073997726,0.70266783,0.00071498496],"about_ca_topic_score_codex":0.00031901992,"about_ca_topic_score_gemma":0.00008231963,"teacher_disagreement_score":0.3000855,"about_ca_system_score_codex":0.000108976805,"about_ca_system_score_gemma":0.000097731434,"threshold_uncertainty_score":0.9999369},"labels":[],"label_agreement":null},{"id":"W4303685786","doi":"10.1093/femsle/fnac098","title":"Inflammatory bowel disease-associated adherent-invasive <i>Escherichia coli</i> have elevated host-defense peptide resistance","year":2022,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Antimicrobial Peptides and Activities","field":"Immunology and Microbiology","cited_by":19,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Toronto Metropolitan University","funders":"Faculty of Science, Chiang Mai University; Natural Sciences and Engineering Research Council of Canada","keywords":"Microbiology; Protease; Biology; Escherichia coli; Inflammatory bowel disease; Antibiotic resistance; Ulcerative colitis; Antibiotics; Antimicrobial; Antimicrobial peptides; Pathogenesis; Immunology; Gene; Disease; Medicine; Enzyme; Pathology; Genetics","score_opus":0.007846797934347378,"score_gpt":0.19301783369374653,"score_spread":0.18517103575939917,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4303685786","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99014306,0.0014841121,0.00003723049,0.00324191,0.0016113488,0.00074404717,0.0020379361,0.00034109244,0.0003592863],"genre_scores_gemma":[0.9689362,0.000082238366,0.00007472631,0.01394676,0.0000812031,0.00021749204,0.0027511069,0.00010316847,0.01380708],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9959784,0.0010693051,0.000688748,0.0009379628,0.00006050465,0.0012650805],"domain_scores_gemma":[0.9982605,0.00035036594,0.00058678444,0.00061149645,0.000098048054,0.00009281347],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0003883694,0.00061346975,0.00066128577,0.0002175024,0.0012969362,0.00004289999,0.00071545475,0.00030426893,0.0015516944],"category_scores_gemma":[0.00014278322,0.00065690785,0.00039510007,0.00023100285,0.000955505,0.00016105108,0.00053363404,0.0012441026,0.0005289849],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0007389343,0.00018633468,0.009262852,0.000027761684,0.00045126138,0.00013722414,0.00048727434,0.00006997027,0.75197583,0.00008154576,0.23657043,0.000010567161],"study_design_scores_gemma":[0.008928684,0.0005764989,0.04053761,0.00026678413,0.00053619,0.0002184597,0.0034470456,0.000004379193,0.390905,0.000113177746,0.5513306,0.0031355699],"about_ca_topic_score_codex":0.00013072202,"about_ca_topic_score_gemma":0.00032043285,"teacher_disagreement_score":0.36107087,"about_ca_system_score_codex":0.0004071664,"about_ca_system_score_gemma":0.0002555333,"threshold_uncertainty_score":0.9995882},"labels":[],"label_agreement":null},{"id":"W4372183979","doi":"10.1093/femsle/fnad039","title":"<i>Bacillus subtilis</i> small replicative plasmid collection incorporating five distinct origins of replication and compatible with Golden Gate DNA assembly","year":2023,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Bacterial Genetics and Biotechnology","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Victoria","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Bacillus subtilis; Plasmid; Replication (statistics); DNA replication; Biology; DNA; Genetics; Bacteria; Virology","score_opus":0.010656854001428349,"score_gpt":0.21544715914862417,"score_spread":0.20479030514719582,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4372183979","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9973348,0.00003844953,0.0003709507,0.0015159884,0.00011710841,0.00036596274,0.00015368655,0.0000522912,0.000050790954],"genre_scores_gemma":[0.99719423,0.00006854346,0.00097142527,0.00032466836,0.000071994866,0.000050474897,0.0011884636,0.000024445064,0.000105773666],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99863183,0.00008872852,0.00029449497,0.0006859069,0.00003318234,0.00026582845],"domain_scores_gemma":[0.99895185,0.0000321223,0.00032979017,0.00054344145,0.00009884826,0.0000439588],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00022719575,0.00020198857,0.00026067722,0.00010706993,0.00011900217,0.00001521212,0.00018808225,0.00027041495,0.0000018441096],"category_scores_gemma":[0.000056132783,0.00017732172,0.000043197622,0.00033527534,0.00040253962,0.0000037597067,0.00016940903,0.00012951125,0.0000067204255],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00016139589,0.000023722625,0.0054501314,0.00002036588,0.00007933745,0.0000029348796,0.00007260253,0.0000350784,0.9919836,0.000047553705,0.0016603074,0.00046295763],"study_design_scores_gemma":[0.00070073147,0.0007783092,0.010836672,0.000023246792,0.000028895043,0.00008223954,0.00008967685,0.00008419237,0.97906864,0.00001645925,0.008051766,0.00023918206],"about_ca_topic_score_codex":0.00015469306,"about_ca_topic_score_gemma":0.00037187056,"teacher_disagreement_score":0.012914983,"about_ca_system_score_codex":0.000039288207,"about_ca_system_score_gemma":0.000051679737,"threshold_uncertainty_score":0.723097},"labels":[],"label_agreement":null},{"id":"W4381716441","doi":"10.1093/femsle/fnad058","title":"<i>Tractidigestivibacter montrealensis</i> sp. nov., a new member of human gut microbiota isolated from a healthy volunteer","year":2023,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Gut microbiota and health","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institut National de la Recherche Scientifique; Université de Montréal","funders":"Canadian Institutes of Health Research; National Science Foundation","keywords":"Volunteer; Microbiology; Gut flora; Biology; Immunology; Ecology","score_opus":0.014813452018217543,"score_gpt":0.2595885448783323,"score_spread":0.24477509286011473,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4381716441","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.991742,0.00048256014,0.000113436654,0.005760162,0.0006548098,0.0004374367,0.0006131561,0.00008955993,0.00010687221],"genre_scores_gemma":[0.9811166,0.00021791559,0.00050343684,0.010781076,0.000568411,0.000013706805,0.005098106,0.00009852955,0.0016022063],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.997228,0.00018542107,0.00069193187,0.00092161255,0.00005902976,0.0009139764],"domain_scores_gemma":[0.9985083,0.000050874296,0.00036112563,0.00077612506,0.00009557053,0.00020801001],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0002159031,0.00045306704,0.00060765014,0.00020702448,0.0001753765,0.000022652875,0.00042736792,0.0005867582,0.00016565959],"category_scores_gemma":[0.000029798335,0.00044944647,0.0002698508,0.000329324,0.0002719026,0.000010200044,0.00024315059,0.00038081306,0.000330952],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00021910027,0.00007098585,0.005462178,0.000023742059,0.00016806647,0.000015834616,0.00020466762,0.000009799688,0.7322644,0.0000023364025,0.2614316,0.00012730874],"study_design_scores_gemma":[0.0047657867,0.00092995056,0.12250998,0.00015065355,0.0001667812,0.00023270289,0.00010172737,0.000008681753,0.5740411,0.000021890173,0.29580426,0.0012664555],"about_ca_topic_score_codex":0.0027022236,"about_ca_topic_score_gemma":0.0011695427,"teacher_disagreement_score":0.15822326,"about_ca_system_score_codex":0.000053095853,"about_ca_system_score_gemma":0.00020008633,"threshold_uncertainty_score":0.99979573},"labels":[],"label_agreement":null},{"id":"W4382343878","doi":"10.1093/femsle/fnad059","title":"First characterization of the intestinal microbiota in healthy Tunisian adults using 16S rRNA gene sequencing","year":2023,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Gut microbiota and health","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Ottawa","funders":"","keywords":"Firmicutes; Gut flora; Biology; Dysbiosis; Population; Overweight; Genetics; 16S ribosomal RNA; Immunology; Gene; Obesity; Medicine","score_opus":0.015592379403881447,"score_gpt":0.23961515857794294,"score_spread":0.2240227791740615,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4382343878","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99596107,0.0000618396,0.00015374114,0.002800436,0.0005071154,0.000360689,0.0001295303,0.000019261155,0.000006303737],"genre_scores_gemma":[0.9949857,0.00008482997,0.0004598434,0.0035059585,0.00015161726,0.000007920667,0.0007346288,0.000031727486,0.000037769445],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9984131,0.00015355615,0.00044529943,0.00044621472,0.000033303204,0.00050853746],"domain_scores_gemma":[0.9992406,0.000016173544,0.0002530788,0.00039079555,0.000049269696,0.000050117746],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00025653472,0.00020801084,0.0002453042,0.00015599666,0.00015765274,0.000010009301,0.00033900177,0.00022115964,0.00000896924],"category_scores_gemma":[0.000036647507,0.00018121746,0.00010088914,0.0004106529,0.00021087911,0.000005644355,0.00021374282,0.00021585888,0.000015468724],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001297529,0.000021603664,0.017067427,0.000072955925,0.00001676585,0.00000574914,0.00024744964,0.00013240274,0.981838,0.000003123464,0.00041379026,0.000050998948],"study_design_scores_gemma":[0.0014990248,0.00024059438,0.1252416,0.00032657143,0.000017565948,0.00038534135,0.00012287051,0.00025825988,0.8664201,0.000002577505,0.005082218,0.00040328744],"about_ca_topic_score_codex":0.00032172608,"about_ca_topic_score_gemma":0.00045891004,"teacher_disagreement_score":0.115417905,"about_ca_system_score_codex":0.00011366018,"about_ca_system_score_gemma":0.00018037356,"threshold_uncertainty_score":0.7389834},"labels":[],"label_agreement":null},{"id":"W4391463590","doi":"10.1093/femsle/fnae007","title":"Knockout of adenylosuccinate synthase <i>purA</i> increases susceptibility to colistin in <i>Escherichia coli</i>","year":2024,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Antibiotic Resistance in Bacteria","field":"Biochemistry, Genetics and Molecular Biology","cited_by":10,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Institute of Genetics; Ryobi Teien Memory Foundation; Ichiro Kanehara Foundation for the Promotion of Medical Sciences and Medical Care; Japan Society for the Promotion of Science; Keio University; Takeda Science Foundation","keywords":"Colistin; Biochemistry; ATP synthase; Chemistry; Mutant; Polymyxin; Biology; Enzyme; Antibiotics","score_opus":0.0069577871624526685,"score_gpt":0.23969495199643537,"score_spread":0.2327371648339827,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4391463590","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9964349,0.0007756539,0.000267609,0.0011428654,0.00044938424,0.00041586874,0.00033228894,0.00003369249,0.0001477094],"genre_scores_gemma":[0.99640644,0.000044133703,0.00093226956,0.0019146474,0.00015448508,0.000012951175,0.0002560633,0.000038765025,0.00024023384],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9980919,0.00020575408,0.00049037964,0.0007127491,0.00005096707,0.00044829294],"domain_scores_gemma":[0.9991953,0.000072345654,0.00008389699,0.00050654047,0.00004846259,0.00009350372],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00033741214,0.00027451187,0.00038427144,0.00012065859,0.000037129776,0.000028547176,0.0003579033,0.00024301467,0.00007756724],"category_scores_gemma":[0.0001705743,0.00026758178,0.00013075235,0.0002772604,0.0003015689,0.000006726229,0.00018650448,0.00018706878,0.000055643195],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00035157715,0.00007252264,0.023085937,0.00010572951,0.00005410203,0.00003370429,0.000060775496,0.000026429878,0.9517724,0.000024913244,0.024276271,0.00013565723],"study_design_scores_gemma":[0.0005458471,0.00031562906,0.029128892,0.00021101143,0.000031887874,0.00004982726,0.00007044682,0.0000051035327,0.922261,0.000011553315,0.046944536,0.00042428434],"about_ca_topic_score_codex":0.0002277195,"about_ca_topic_score_gemma":0.0004846489,"teacher_disagreement_score":0.029511401,"about_ca_system_score_codex":0.000059123446,"about_ca_system_score_gemma":0.00010338153,"threshold_uncertainty_score":0.99997765},"labels":[],"label_agreement":null},{"id":"W4393345029","doi":"10.1093/femsle/fnae025","title":"Leveraging aquatic-terrestrial interfaces to capture putative habitat generalists","year":2024,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Microbial Community Ecology and Physiology","field":"Environmental Science","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"The Scarborough Hospital; University of Toronto","funders":"U.S. Department of Agriculture; National Institute of Food and Agriculture; National Science Foundation","keywords":"Generalist and specialist species; Habitat; Ecology; Abiotic component; Microorganism; Biology; Environmental science; Bacteria","score_opus":0.01488635906673995,"score_gpt":0.24324079816094005,"score_spread":0.22835443909420008,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4393345029","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98576456,0.00009568575,0.0011218437,0.010236223,0.0019099247,0.00026549195,0.000037044174,0.00010704487,0.00046220425],"genre_scores_gemma":[0.98305804,0.0000035430944,0.001035055,0.015102933,0.00014948103,0.000021863978,0.00020123294,0.000022417087,0.00040543606],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.99831617,0.0004355596,0.00024747255,0.00049137295,0.00003390825,0.00047552248],"domain_scores_gemma":[0.99936074,0.00024559753,0.00004476422,0.000265031,0.0000026503499,0.000081233666],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00025243685,0.0002456567,0.00026192036,0.00008984991,0.00019739676,0.000047037855,0.0004733732,0.00017727855,0.0017705096],"category_scores_gemma":[0.000038499857,0.00021857812,0.00008738411,0.00021468915,0.00044801587,0.00011476444,0.00041733065,0.000504786,0.0039637024],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00004343407,0.000017021981,0.0010465124,0.0000042877937,0.000050945506,0.000038669685,0.0038965214,0.0010039279,0.8238492,0.000012128314,0.16948718,0.00055014883],"study_design_scores_gemma":[0.001943984,0.00088236,0.014892548,0.00020970542,0.00018914849,0.00080617884,0.0010460216,0.0011345946,0.16370945,0.0012141184,0.8113046,0.002667296],"about_ca_topic_score_codex":0.0008540884,"about_ca_topic_score_gemma":0.0013933303,"teacher_disagreement_score":0.6601398,"about_ca_system_score_codex":0.00018428304,"about_ca_system_score_gemma":0.000015410114,"threshold_uncertainty_score":0.999142},"labels":[],"label_agreement":null},{"id":"W4400699303","doi":"10.1093/femsle/fnae055","title":"A modular inquiry-based semester theme that integrates data science education and bioinformatics in protein structure function courses","year":2024,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Genetics, Bioinformatics, and Biomedical Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Wilfrid Laurier University; University of Windsor","funders":"National Institute of General Medical Sciences; University of California, San Francisco; National Institutes of Health","keywords":"Theme (computing); Modular design; Function (biology); Computer science; Computational biology; Mathematics education; Data science; Bioinformatics; Biology; World Wide Web; Psychology; Programming language; Genetics","score_opus":0.02223121438418691,"score_gpt":0.2882177147084191,"score_spread":0.2659865003242322,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4400699303","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9892028,0.0008526982,0.006480465,0.0021941643,0.00065459165,0.000404933,0.00015295687,0.000019015284,0.00003838832],"genre_scores_gemma":[0.99027413,0.000096576645,0.0053907577,0.0021678796,0.00017954333,0.000014964382,0.0017740872,0.000014494217,0.000087544526],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99877614,0.000046317215,0.00027955128,0.00041477673,0.00011421535,0.0003690309],"domain_scores_gemma":[0.99927515,0.000017034778,0.00006255,0.00049826974,0.0000617492,0.0000852407],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005061971,0.00018238922,0.00013644592,0.00027818634,0.00008326752,0.00014814758,0.00047367407,0.00019107154,0.000010118288],"category_scores_gemma":[0.00012355349,0.00013760407,0.000026966152,0.00023484945,0.0010435466,0.000041579602,0.0003095023,0.0002217939,0.000009389111],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000028426919,0.00002668336,0.00080322864,0.0001364086,0.000019658977,0.0000012536473,0.00020841381,0.0000099623785,0.9834642,0.000015022964,0.003225529,0.01206122],"study_design_scores_gemma":[0.00137033,0.000899672,0.0059373933,0.0007132153,0.00006754783,0.00016795825,0.002790849,0.02387574,0.7783545,0.00022885947,0.1844994,0.001094506],"about_ca_topic_score_codex":0.000023774894,"about_ca_topic_score_gemma":0.00006257698,"teacher_disagreement_score":0.20510966,"about_ca_system_score_codex":0.000035842168,"about_ca_system_score_gemma":0.0005718579,"threshold_uncertainty_score":0.5611331},"labels":[],"label_agreement":null},{"id":"W4401059297","doi":"10.1093/femsle/fnae061","title":"Analysis of CenKR essentiality in <i>Sinorhizobium meliloti</i> and its activity at a target gene promoter <i>in vivo</i>","year":2024,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Legume Nitrogen Fixing Symbiosis","field":"Agricultural and Biological Sciences","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of New Brunswick","funders":"","keywords":"Sinorhizobium meliloti; In vivo; Gene; Promoter; Biology; Genetics; Computational biology; Molecular biology; Gene expression; Mutant","score_opus":0.00906717335709299,"score_gpt":0.20713609711798797,"score_spread":0.198068923760895,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4401059297","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9943094,0.00059864495,6.524976e-7,0.0041688993,0.00018384765,0.0002188913,0.0004475419,0.00004234644,0.00002973377],"genre_scores_gemma":[0.99886125,0.000015934298,0.00004564261,0.0008431975,0.00005255207,0.000014439505,0.00011322151,0.0000022045579,0.000051568357],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.998357,0.00027104263,0.00031247962,0.00060135336,0.00006073013,0.0003974079],"domain_scores_gemma":[0.99957144,0.00019120876,0.000086386186,0.00008203967,0.00001969069,0.00004920949],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00038673912,0.00020500363,0.0004610452,0.0001193392,0.000047827045,0.000025729003,0.00019569552,0.00018177318,0.00022843336],"category_scores_gemma":[0.000018319632,0.00009900025,0.00017502348,0.001096225,0.000116868185,0.000112502494,0.00016713665,0.00018912634,0.000014065449],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00003858228,0.00007038004,0.058700554,0.000020789648,0.00020021653,0.000027978407,0.00012420672,0.000001960725,0.9402098,0.0000042232605,0.00040900978,0.00019229668],"study_design_scores_gemma":[0.0001395925,0.00004205022,0.09504058,0.000024502788,0.0001283996,0.000012525443,0.000008264561,0.000046605655,0.90363806,0.0000077811255,0.00070942176,0.00020219083],"about_ca_topic_score_codex":0.0006017447,"about_ca_topic_score_gemma":0.0019594503,"teacher_disagreement_score":0.03657172,"about_ca_system_score_codex":0.00009101913,"about_ca_system_score_gemma":0.000007765984,"threshold_uncertainty_score":0.40371132},"labels":[],"label_agreement":null},{"id":"W4402857763","doi":"10.1093/femsle/fnae078","title":"Characterization of <i>Aeromonas salmonicida</i> mesophilic isolates from Alberta (Canada) allows the development of a more sensitive <i>Dictyostelium discoideum</i> predation test","year":2024,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Vibrio bacteria research studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Agriculture and Agri-Food Canada; McGill University; Université Laval","funders":"Agriculture and Agri-Food Canada; Natural Sciences and Engineering Research Council of Canada; Government of Canada; Université Laval","keywords":"Biology; Aeromonas salmonicida; Psychrophile; Mesophile; Predation; Dictyostelium discoideum; Microbiology; Zoology; Bacteria; Ecology; Genetics; Gene","score_opus":0.005420190593865061,"score_gpt":0.2110875324097488,"score_spread":0.20566734181588375,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4402857763","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99311984,0.00027950248,0.00027841196,0.005154119,0.00022404439,0.00032696957,0.00058207795,0.000008608715,0.00002640167],"genre_scores_gemma":[0.99562395,0.000071729984,0.00018475496,0.0007621518,0.00011253151,0.00003161434,0.0031080546,0.000025497977,0.00007972418],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9987457,0.000108818174,0.0004096281,0.00039288535,0.0000786077,0.00026435708],"domain_scores_gemma":[0.9992797,0.00016722809,0.00015176139,0.00028552828,0.00008335595,0.000032461172],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014440276,0.00020827317,0.0002482178,0.000041656785,0.00008632906,0.000016183818,0.00023188311,0.00011052527,0.000009269737],"category_scores_gemma":[0.000098597724,0.00015463535,0.00007288803,0.00011454771,0.00027584835,0.000009341834,0.00023826631,0.00012220778,0.0000036659205],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000056316818,0.000026333726,0.0016880373,0.0000352658,0.00033664226,0.0000028188358,0.0009580012,0.0000061891137,0.9952531,0.0000022201004,0.0013707108,0.00026438385],"study_design_scores_gemma":[0.0001765308,0.000064788925,0.016815154,0.000074501506,0.000033660795,0.000010152561,0.00013332386,0.000030121468,0.97415453,0.0000012398962,0.008353062,0.00015294121],"about_ca_topic_score_codex":0.0064261686,"about_ca_topic_score_gemma":0.040778667,"teacher_disagreement_score":0.0343525,"about_ca_system_score_codex":0.00004624987,"about_ca_system_score_gemma":0.00030268283,"threshold_uncertainty_score":0.9767246},"labels":[],"label_agreement":null},{"id":"W4403502323","doi":"10.1093/femsle/fnae086","title":"Discovery of a glyphosate oxidase in nature","year":2024,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Pesticide and Herbicide Environmental Studies","field":"Environmental Science","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Waterloo; Wilfrid Laurier University","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Glyphosate; Glycine; Aminomethylphosphonic acid; Glucose oxidase; Biochemistry; Enzyme; Metagenomics; Chemistry; Biology; Biotechnology; Amino acid; Gene","score_opus":0.0037082402511560797,"score_gpt":0.20558841586722523,"score_spread":0.20188017561606916,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4403502323","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9959754,0.001038395,0.00005427067,0.0018701556,0.00023616695,0.00009695028,0.000031825482,0.000021317182,0.0006755537],"genre_scores_gemma":[0.99735236,0.000036670463,0.00018522846,0.0021419285,0.000024248591,0.000009353651,0.000019735566,0.000010250661,0.00022022333],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9992103,0.000033987406,0.00017923064,0.00029389196,0.000041026626,0.00024155936],"domain_scores_gemma":[0.9997702,0.000058913793,0.000028017708,0.00012519817,4.302711e-7,0.000017236458],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000097347234,0.00012674397,0.00016436061,0.000045456327,0.000026862985,0.00001093521,0.00014425383,0.00010416346,0.00048278115],"category_scores_gemma":[0.000008788476,0.00010354501,0.00006146432,0.00015089521,0.00039148575,0.0001387047,0.00018996967,0.0002684931,0.0003645517],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000012420871,0.000024245157,0.039616715,0.000010051809,0.000016795551,0.000085249405,0.00020063925,0.000097298136,0.9524712,0.00003230061,0.007034139,0.000398969],"study_design_scores_gemma":[0.0005548477,0.00011099645,0.76907635,0.00017478429,0.000038366492,0.00010717673,0.00013050293,0.000051261828,0.19200553,0.00034711644,0.03688591,0.0005171542],"about_ca_topic_score_codex":0.0005045603,"about_ca_topic_score_gemma":0.0002546662,"teacher_disagreement_score":0.7604657,"about_ca_system_score_codex":0.00012849597,"about_ca_system_score_gemma":0.0000027426772,"threshold_uncertainty_score":0.5286115},"labels":[],"label_agreement":null},{"id":"W4403699520","doi":"10.1093/femsle/fnae089","title":"Whole-genome-based taxonomy as the most accurate approach to identify <i>Flavobacterium</i> species","year":2024,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Microbial Metabolism and Applications","field":"Biochemistry, Genetics and Molecular Biology","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ministère de l'Agriculture, des Pêcheries et de l'Alimentation; Université Laval","funders":"Agricultural Research Service; Université de Moncton; University of Waterloo; U.S. Department of Agriculture","keywords":"Biology; Genotyping; Flavobacterium; Genome; Taxonomy (biology); Bacterial taxonomy; In silico; Phylogenetics; Genetics; Identification (biology); Evolutionary biology; Computational biology; Genotype; Gene; Zoology; 16S ribosomal RNA; Bacteria; Ecology","score_opus":0.017598924983328365,"score_gpt":0.2447454875877625,"score_spread":0.2271465626044341,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4403699520","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.962677,0.0010984812,0.01857254,0.013507469,0.00073867035,0.000997729,0.0008713015,0.00007181581,0.0014650192],"genre_scores_gemma":[0.9551946,0.000054577587,0.0015514628,0.036552444,0.0011580006,0.00052527693,0.002621547,0.00006242932,0.0022796774],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.99850845,0.000107369924,0.00026826892,0.000660521,0.00003785027,0.0004175147],"domain_scores_gemma":[0.99917597,0.000025192225,0.000059711132,0.0006149094,0.000040970208,0.00008322239],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00020023208,0.00026875158,0.0001953832,0.000080243844,0.00018968232,0.00016607004,0.00060203526,0.00015915856,0.000047565154],"category_scores_gemma":[0.000023200017,0.00020367261,0.00014614806,0.000284125,0.0002626696,0.0000066465414,0.00019084671,0.00020527546,0.0006913243],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000019701662,0.000029514636,0.000020953123,0.000014978411,0.000062934145,0.0000023052196,0.00004862982,0.00013793474,0.90166056,0.00012738405,0.097656436,0.00021866077],"study_design_scores_gemma":[0.00014990175,0.000025971758,0.0006367437,0.000008186281,0.00002962144,0.00004125361,0.00003545637,0.0000037479547,0.18690532,0.0000036896472,0.8119392,0.00022091382],"about_ca_topic_score_codex":0.000022696626,"about_ca_topic_score_gemma":0.000008647975,"teacher_disagreement_score":0.71475524,"about_ca_system_score_codex":0.000021182876,"about_ca_system_score_gemma":0.00008647844,"threshold_uncertainty_score":0.88858056},"labels":[],"label_agreement":null},{"id":"W4414726079","doi":"10.1093/femsle/fnaf103","title":"A semi-selective differential medium for identifying strains of <i>Pantoea</i> from environmental samples","year":2025,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Plant Pathogenic Bacteria Studies","field":"Agricultural and Biological Sciences","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Regina","funders":"Natural Sciences and Engineering Research Council of Canada; LOEWE Zentrum AdRIA; Universities Space Research Association","keywords":"Pantoea; Bacteria; Pantoea agglomerans; Enterobacteriaceae; Identification (biology); Growth medium","score_opus":0.01866993922319612,"score_gpt":0.21189582675925828,"score_spread":0.19322588753606215,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4414726079","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9904351,0.00015919299,0.00030740775,0.0014684981,0.00048749437,0.00027807648,0.0068179755,0.000028876471,0.000017369952],"genre_scores_gemma":[0.9967373,0.00003384733,0.00028637765,0.0008241954,0.00014966002,0.000036105226,0.0018912295,0.0000011165912,0.000040184626],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9989708,0.00007860534,0.0002532878,0.00036177112,0.000033444117,0.0003021136],"domain_scores_gemma":[0.999406,0.00038225,0.00012552805,0.000051380706,0.000010442834,0.000024445364],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000073110015,0.00017036514,0.00031498965,0.000018739476,0.00016106319,0.000013702749,0.00024917797,0.000117206204,0.00009382443],"category_scores_gemma":[0.000025304164,0.000079012534,0.00014293149,0.00007262788,0.00022205833,0.000038733087,0.00012591637,0.000093514675,0.000005163466],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00005475354,0.000045890818,0.0068869637,0.0000054504894,0.00017420837,0.000001096588,0.0001267575,2.8940389e-7,0.9878507,0.000011206537,0.0034180945,0.0014245644],"study_design_scores_gemma":[0.00044557013,0.00006192467,0.41915575,0.00004068829,0.000084952335,0.000005205861,0.0002535865,0.0000030708393,0.5748397,0.0001108203,0.0047967373,0.00020196287],"about_ca_topic_score_codex":0.00015675135,"about_ca_topic_score_gemma":0.0005120443,"teacher_disagreement_score":0.41301098,"about_ca_system_score_codex":0.000037003905,"about_ca_system_score_gemma":0.0000059098697,"threshold_uncertainty_score":0.32220376},"labels":[],"label_agreement":null},{"id":"W4415282940","doi":"10.1093/femsle/fnaf114","title":"Development of flow cytometry assay to quantify packaging of <i>C. jejuni</i> by <i>Tetrahymena</i> species","year":2025,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Salmonella and Campylobacter epidemiology","field":"Agricultural and Biological Sciences","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval; Université de Montréal; McGill University","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Campylobacter jejuni; Flow cytometry; Tetrahymena pyriformis; Fluorescence microscope; Ciliate; Fluorescence; Bacteria; Tetrahymena","score_opus":0.01509552038426817,"score_gpt":0.22809724410069132,"score_spread":0.21300172371642315,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4415282940","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9922657,0.00029672458,0.00075434946,0.0054534697,0.00042536156,0.00018062003,0.00016684445,0.00003629913,0.00042064942],"genre_scores_gemma":[0.98746914,0.000021293423,0.0035998041,0.00825544,0.000052530013,0.0000122568,0.00026811197,0.0000017502991,0.0003196479],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99824584,0.00020843586,0.00062648545,0.0004175705,0.000057407935,0.00044428217],"domain_scores_gemma":[0.99904174,0.0005275289,0.00019463302,0.00011719916,0.000055900433,0.00006300819],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00060337584,0.00021799315,0.00054090447,0.00007105017,0.000100523925,0.000008813502,0.0004633416,0.00017862016,0.00010787565],"category_scores_gemma":[0.00008721702,0.00010272889,0.00012809319,0.00062304526,0.00020617085,0.000033438562,0.00017662671,0.00015223274,0.000029114344],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000035125373,0.0000551673,0.042728204,0.000013694453,0.000061668485,0.0000012057861,0.000113525726,0.000003884728,0.9051897,0.000036389287,0.044159815,0.007601656],"study_design_scores_gemma":[0.00018610506,0.00007070939,0.076820105,0.00006272587,0.000017189654,0.000006038011,0.00023854249,0.0000020091159,0.7013008,0.000015971216,0.22104263,0.00023719056],"about_ca_topic_score_codex":0.00004517495,"about_ca_topic_score_gemma":0.000080746024,"teacher_disagreement_score":0.20388888,"about_ca_system_score_codex":0.000040826057,"about_ca_system_score_gemma":0.000017072653,"threshold_uncertainty_score":0.41891626},"labels":[],"label_agreement":null},{"id":"W4416950767","doi":"10.1093/femsle/fnaf135","title":"Arbuscular mycorrhizal fungi and phosphorus-mobilizing microorganisms mediate organic phosphorus cycling in tropical savanna soils","year":2025,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Mycorrhizal Fungi and Plant Interactions","field":"Agricultural and Biological Sciences","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Acadia University","funders":"Fondo Nacional de Ciencia y Tecnología; Consejo de Desarrollo Científico y Humanístico, Universidad Central de Venezuela","keywords":"Ultisol; Phosphorus; Symbiosis; Arbuscular mycorrhiza; Entisol; Soil water; Microorganism; Mycorrhiza","score_opus":0.005108045200390333,"score_gpt":0.1931455714081003,"score_spread":0.18803752620770997,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4416950767","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98790497,0.005688097,0.000051746418,0.0043635895,0.0010745877,0.00030363465,0.0003049247,0.00009390304,0.00021452889],"genre_scores_gemma":[0.9879569,0.003393107,0.00017877035,0.0073502404,0.00017600677,0.00002187195,0.0007707498,0.000004283688,0.00014807406],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99800366,0.00016450995,0.00046209968,0.0006519593,0.00005551092,0.0006622817],"domain_scores_gemma":[0.9984293,0.0012161828,0.000101717524,0.000116495044,0.000033806038,0.00010252668],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002048796,0.0003175403,0.000424578,0.00007447104,0.0002413518,0.00007474326,0.00032080087,0.00029270598,0.0008897683],"category_scores_gemma":[0.00015196807,0.00016530718,0.00013142983,0.000477829,0.000054901215,0.00010710359,0.00016654722,0.000521807,0.00029988366],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007430871,0.000048551927,0.17711002,0.0000064954534,0.000033766202,0.000034207183,0.00008211934,0.0000056835906,0.8143661,0.000116907446,0.005113883,0.003007952],"study_design_scores_gemma":[0.0008525975,0.00035271302,0.3369639,0.0005066353,0.00013129383,0.00047577661,0.0008290703,0.00015160981,0.42672542,0.000684778,0.23081477,0.0015114419],"about_ca_topic_score_codex":0.00057765085,"about_ca_topic_score_gemma":0.0003177533,"teacher_disagreement_score":0.38764068,"about_ca_system_score_codex":0.0000658073,"about_ca_system_score_gemma":0.000019355843,"threshold_uncertainty_score":0.97423387},"labels":[],"label_agreement":null}]}