{"meta":{"query_hash":"92c7b9c338dd","filters":{"venue":"Gene"},"cohort_total":409,"direct_labels_cover":1,"predictions_cover":409,"exported":409,"export_cap":100000,"truncated":false,"label_status":"direct model label, unvalidated","prediction_status":"machine_predicted_unvalidated (Codex and Gemma teacher distillation)","score_status":"score_only:v0-immature-baseline","snapshot":{"source":"OpenAlex, pinned release, all 482 partitions","release":"2026-06-24","frame_built":"2026-07-12"},"permalink":"https://metacan.xera.ac/q/92c7b9c338dd","api":"https://metacan.xera.ac/api/v1/cohort?venue=Gene"},"results":[{"id":"W1062333943","doi":"10.1016/j.gene.2015.07.074","title":"Structure and function of cardiac troponin C (TNNC1): Implications for heart failure, cardiomyopathies, and troponin modulating drugs","year":2015,"lang":"en","type":"review","venue":"Gene","topic":"Cardiomyopathy and Myosin Studies","field":"Medicine","cited_by":135,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"National Institute of General Medical Sciences; Division of Orthopaedic Surgery, University of Alberta; National Institutes of Health; University of Alberta; Elsevier Foundation; Heart and Stroke Foundation of Canada; Foundation for the National Institutes of Health","keywords":"Troponin; Troponin C; Cardiac muscle; Troponin I; Actin; Calcium; Biology; Myofilament; Muscle contraction; Skeletal muscle; Troponin complex; Biophysics; Internal medicine; Biochemistry; Anatomy; Medicine","score_opus":0.031619258602978616,"score_gpt":0.3136484986270557,"score_spread":0.2820292400240771,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1062333943","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0022115374,0.99375767,0.0002334991,0.00011587567,0.0003295734,0.0018360291,0.0013836588,0.000044171495,0.0000879776],"genre_scores_gemma":[0.0042645335,0.9893092,0.004269743,0.000027546168,0.0009687015,0.00030435456,0.0006386464,0.00007921453,0.00013807045],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9983044,0.00011960682,0.0005486178,0.0005382429,0.00020426804,0.0002848169],"domain_scores_gemma":[0.99864,0.00013203578,0.00026869916,0.0004923963,0.00030592165,0.00016091905],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00043789507,0.0004152643,0.0027087056,0.00020325571,0.00016923578,0.000023401202,0.0000528827,0.00031047285,0.000001926107],"category_scores_gemma":[0.0001055493,0.000339129,0.0005349615,0.00026411313,0.00014897317,0.000051409243,0.000121449826,0.00024323729,7.451747e-7],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00005340752,0.000013524862,0.00021834747,0.010532603,0.0010147706,6.977801e-7,0.00024588886,0.0000013167908,0.00058668933,0.00024230176,0.006104912,0.9809855],"study_design_scores_gemma":[0.00059285754,0.00024534028,0.0010537559,0.0013941951,0.0055517494,0.00018059865,0.0002062048,0.000002251156,0.00009746318,0.0002138416,0.99016833,0.0002934274],"about_ca_topic_score_codex":0.000026314374,"about_ca_topic_score_gemma":0.0000029898954,"teacher_disagreement_score":0.9840634,"about_ca_system_score_codex":0.00010912205,"about_ca_system_score_gemma":0.00025474047,"threshold_uncertainty_score":0.99990606},"labels":[],"label_agreement":null},{"id":"W11602344","doi":"10.1016/s0378-1119(01)00694-1","title":"Canadian Studies in Europe/Études canadiennes en Europe","year":2007,"lang":"en","type":"book","venue":"Gene","topic":"Canadian Identity and History","field":"Social Sciences","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Political science","score_opus":0.03621363932048263,"score_gpt":0.26544211938819745,"score_spread":0.22922848006771482,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W11602344","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0008765281,0.009629405,1.09973314e-7,0.0005742381,0.0016228405,0.00020868523,0.00014384989,0.00003222398,0.98691213],"genre_scores_gemma":[0.0004350353,0.007756296,0.000027192194,0.00074506615,0.0012137804,0.000006089573,0.000040047544,0.000043803448,0.9897327],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9982432,0.00013661038,0.00025704675,0.00034921995,0.00030172267,0.00071217626],"domain_scores_gemma":[0.9986894,0.00008674773,0.00008508904,0.00023074604,0.00030024818,0.00060772663],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00081964774,0.00018399923,0.00032541383,0.0016711897,0.0007192759,0.00013583564,0.00048436812,0.00025206487,0.0004745457],"category_scores_gemma":[0.00042350334,0.0002577914,0.000055498404,0.000551705,0.00068056973,0.00008373339,0.000047174883,0.0003568432,0.0005438439],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":true,"about_ca_system_consensus":true,"study_design_scores_codex":[0.000004034068,0.000009361198,0.00008742877,0.000072442344,0.00010712173,0.0029119353,0.036290456,0.0000054425946,0.000006070182,0.09767989,0.8525666,0.010259213],"study_design_scores_gemma":[0.00005594775,0.000011281795,0.00026508604,0.00007364555,0.000024341098,0.0000035133235,0.0008556291,8.123954e-8,4.8597553e-7,0.0002279412,0.9982013,0.00028073936],"about_ca_topic_score_codex":0.9979637,"about_ca_topic_score_gemma":0.99999875,"teacher_disagreement_score":0.14563471,"about_ca_system_score_codex":0.009889174,"about_ca_system_score_gemma":0.020115161,"threshold_uncertainty_score":0.9999874},"labels":[],"label_agreement":null},{"id":"W1795468560","doi":"10.1016/j.gene.2015.09.041","title":"Membrane gene ontology bias in sequencing and microarray obtained by housekeeping-gene analysis","year":2015,"lang":"en","type":"article","venue":"Gene","topic":"Molecular Biology Techniques and Applications","field":"Biochemistry, Genetics and Molecular Biology","cited_by":11,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Simon Fraser University","funders":"Simon Fraser University; National Natural Science Foundation of China; Western Canada Research Grid; Compute Canada","keywords":"Biology; Housekeeping gene; Transcriptome; Computational biology; Gene; Gene expression profiling; Microarray; Genetics; Genome; Microarray analysis techniques; Gene ontology; Housekeeping; RNA-Seq; DNA microarray; Gene expression","score_opus":0.02877316792504609,"score_gpt":0.27222841869570114,"score_spread":0.24345525077065505,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1795468560","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97099245,0.002386918,0.025624614,0.00042617568,0.000028551362,0.0002098817,0.00005861324,0.000032937263,0.0002398888],"genre_scores_gemma":[0.98260504,0.0005808711,0.0148026245,0.0007615371,0.00006480139,0.000078317724,0.00084905705,0.000023702098,0.00023402262],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99866337,0.00011582608,0.00028300678,0.00054926955,0.00007649313,0.0003120569],"domain_scores_gemma":[0.9991901,0.000008914212,0.00010058561,0.0004735457,0.00008110196,0.00014575676],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00037515015,0.00018721887,0.0002847622,0.0001309807,0.000054999982,0.000016133177,0.00019871315,0.00028481384,0.0000068890076],"category_scores_gemma":[0.00006461707,0.00018976779,0.00008893412,0.00032435812,0.00010941895,0.000002716594,0.00012578856,0.0000970981,0.00000376352],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000027283642,0.000030738196,0.0046728035,0.0000034183163,0.00014685471,0.000007871748,0.000042964017,0.00011089405,0.993751,0.00002600121,0.0006822509,0.0004979112],"study_design_scores_gemma":[0.00048101344,0.00012649837,0.00064208114,0.0000018451627,0.00009625405,0.000049165126,0.0000316447,0.00017284771,0.98928833,0.0000806092,0.008801398,0.00022830383],"about_ca_topic_score_codex":0.00034459712,"about_ca_topic_score_gemma":0.00039932682,"teacher_disagreement_score":0.011612647,"about_ca_system_score_codex":0.000042524567,"about_ca_system_score_gemma":0.00008987662,"threshold_uncertainty_score":0.77385056},"labels":[],"label_agreement":null},{"id":"W1961120958","doi":"10.1016/j.gene.2015.08.045","title":"A pilot study to estimate incidence of guanidinoacetate methyltransferase deficiency in newborns by direct sequencing of the GAMT gene","year":2015,"lang":"en","type":"article","venue":"Gene","topic":"Muscle metabolism and nutrition","field":"Biochemistry, Genetics and Molecular Biology","cited_by":29,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hospital for Sick Children; University of Toronto","funders":"Stichting Metakids","keywords":"Creatine; Missense mutation; Biology; Mutant; Gene; In silico; Genetics; Molecular biology; Mutation; Endocrinology","score_opus":0.03056801924693401,"score_gpt":0.29291113115693657,"score_spread":0.26234311191000254,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1961120958","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9959762,0.0018808751,0.001391647,0.00004380276,0.00010387875,0.0004035949,0.000056010547,0.000004345443,0.00013962417],"genre_scores_gemma":[0.9980823,0.00006983055,0.0016892116,0.000054580465,0.000028022248,0.00002261146,0.0000136844565,0.000011758616,0.000027995162],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99892753,0.00016754145,0.00028468846,0.00025203888,0.00019139916,0.00017680801],"domain_scores_gemma":[0.9993763,0.000010361098,0.000069356865,0.00036745038,0.0001051164,0.00007144681],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005899471,0.000113091126,0.00019541962,0.00004748587,0.00002416071,0.0000056899726,0.0002508893,0.00002339402,0.0000021495116],"category_scores_gemma":[0.00014668315,0.00008881854,0.000039408573,0.00023902456,0.00003857372,0.00000447345,0.000096445176,0.000047857953,0.0000010319685],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012686753,0.00027923047,0.0068486086,0.0000147384135,0.0000089420155,0.0000015596266,0.00035894537,0.00078068854,0.99102837,0.000004718267,0.00011462635,0.00043269413],"study_design_scores_gemma":[0.00077607535,0.0010120093,0.013915125,0.000015311798,0.000024807101,0.0000034778739,0.00012150499,0.000034555927,0.98385936,0.000045024928,0.00009355635,0.0000991843],"about_ca_topic_score_codex":0.00074581255,"about_ca_topic_score_gemma":0.0004955129,"teacher_disagreement_score":0.0071690143,"about_ca_system_score_codex":0.000017462115,"about_ca_system_score_gemma":0.000108108616,"threshold_uncertainty_score":0.36219147},"labels":[],"label_agreement":null},{"id":"W1963932872","doi":"10.1016/s0378-1119(01)00627-8","title":"The prion gene complex encoding PrPC and Doppel: insights from mutational analysis","year":2001,"lang":"en","type":"review","venue":"Gene","topic":"Prion Diseases and Protein Misfolding","field":"Biochemistry, Genetics and Molecular Biology","cited_by":46,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Occupational Cancer Research Centre; University of Toronto","funders":"Alzheimer Society","keywords":"PRNP; Biology; Gene; Genetics; Coding region; Bovine spongiform encephalopathy; Alternative splicing; Scrapie; Virology; Exon; Molecular biology; Prion protein","score_opus":0.038646341314783055,"score_gpt":0.31630711432625214,"score_spread":0.2776607730114691,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1963932872","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0025182627,0.9956414,0.0011506458,0.000022762664,0.00007907692,0.00031997846,0.00018096645,0.000009907236,0.00007698009],"genre_scores_gemma":[0.0015632544,0.992996,0.0008248184,0.000060676586,0.00051629223,0.000059554706,0.003845432,0.000027149534,0.00010685528],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9986098,0.00015829528,0.00036113887,0.0004987024,0.00016877265,0.00020330891],"domain_scores_gemma":[0.9991105,0.000058053483,0.00024816536,0.00041585724,0.000054365148,0.000113020345],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00011215118,0.00027253595,0.00050978456,0.00007972717,0.0002891563,0.00010062909,0.0002649544,0.00021835815,0.000048767153],"category_scores_gemma":[0.00003790418,0.00019191841,0.00040157666,0.00027825957,0.000063034626,0.0000027243766,0.00020162699,0.00010437359,0.0000105281015],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000011215252,0.000013738389,0.000020561465,0.00015224541,0.0012618921,0.000010875619,0.000011353074,0.000014784324,0.0030382588,0.000020401374,0.00020242491,0.99524224],"study_design_scores_gemma":[0.00012484223,0.000024501025,0.000114439084,0.00012475006,0.0014931469,0.000016167733,0.00000688132,0.00006549188,0.0004881287,0.00012527056,0.9971526,0.00026377485],"about_ca_topic_score_codex":0.000032817396,"about_ca_topic_score_gemma":0.000042051077,"teacher_disagreement_score":0.9969502,"about_ca_system_score_codex":0.000024015408,"about_ca_system_score_gemma":0.0001245124,"threshold_uncertainty_score":0.78262055},"labels":[],"label_agreement":null},{"id":"W1964352846","doi":"10.1016/j.gene.2006.04.019","title":"Evolutionary rate variation among vertebrate β globin genes: Implications for dating gene family duplication events","year":2006,"lang":"en","type":"article","venue":"Gene","topic":"Genetic diversity and population structure","field":"Biochemistry, Genetics and Molecular Biology","cited_by":31,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University","funders":"Biotechnology and Biological Sciences Research Council; Natural Sciences and Engineering Research Council of Canada","keywords":"Biology; Gene duplication; Concerted evolution; Molecular clock; Gene; Gene conversion; Genetics; Functional divergence; Gene family; Molecular evolution; Evolutionary biology; Phylogenetic tree; Globin; Divergence (linguistics); Phylogenetics; Lineage (genetic); Rate of evolution; Segmental duplication; Tandem exon duplication; Genome","score_opus":0.01185206314292527,"score_gpt":0.2338821843421029,"score_spread":0.22203012119917762,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1964352846","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8942312,0.00040840078,0.1039297,0.00018097703,0.00018979178,0.00042329088,0.00031866875,0.000024396773,0.0002935686],"genre_scores_gemma":[0.97831285,0.000058653357,0.014538436,0.00019261675,0.00043168676,0.00008269676,0.0056532496,0.000018171055,0.0007116257],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9990423,0.000050171515,0.00024240691,0.00038019233,0.000081058344,0.00020391424],"domain_scores_gemma":[0.99923825,0.000010004569,0.00016043085,0.0003474479,0.00019295188,0.000050917144],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013976246,0.00013923546,0.000099433644,0.000045411518,0.0002803297,0.000022934006,0.00017116245,0.0001607922,0.000013831612],"category_scores_gemma":[0.000023869276,0.0001581468,0.000080818165,0.00013039584,0.000027201344,0.000011394263,0.00006782799,0.00003586339,0.000014027255],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00002505874,0.000028172262,0.035826698,0.000008138175,0.000029146688,8.3870276e-8,0.000012886136,0.0048114317,0.9545888,0.00034634589,0.0028663848,0.0014568644],"study_design_scores_gemma":[0.000560376,0.000044534583,0.89665353,0.0000030210067,0.000041956675,0.0000037434772,0.0000115656385,0.0009586063,0.09056972,0.0024368626,0.00852216,0.00019391629],"about_ca_topic_score_codex":0.000088420005,"about_ca_topic_score_gemma":0.000021025573,"teacher_disagreement_score":0.8640191,"about_ca_system_score_codex":0.000031466476,"about_ca_system_score_gemma":0.00005623535,"threshold_uncertainty_score":0.6449039},"labels":[],"label_agreement":null},{"id":"W1965123277","doi":"10.1016/s0378-1119(99)00501-6","title":"Transcriptional regulation of the human DNA Methyltransferase (dnmt1) gene","year":2000,"lang":"en","type":"article","venue":"Gene","topic":"Epigenetics and DNA Methylation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":124,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"","keywords":"Biology; DNMT1; DNA methylation; Enhancer; DNA methyltransferase; Gene; Epigenetics of physical exercise; Housekeeping gene; Genetics; Promoter; Regulation of gene expression; Epigenetics; CpG site; Regulatory sequence; Methyltransferase; Transcriptional regulation; Molecular biology; Methylation; Gene expression","score_opus":0.01159324320054436,"score_gpt":0.24044866747896115,"score_spread":0.2288554242784168,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1965123277","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9950638,0.0011861974,0.001899885,0.00012847235,0.000082940416,0.00013753431,0.000040160987,0.0000054857014,0.0014555301],"genre_scores_gemma":[0.9969343,0.0002272493,0.00083891995,0.00007149277,0.00018837141,0.000008570219,0.00018535057,0.000014395785,0.0015313673],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9992371,0.00007305206,0.00021238523,0.00019739362,0.00015721068,0.000122832],"domain_scores_gemma":[0.9995499,0.0000040501004,0.0000390626,0.00031305364,0.00005700569,0.0000368821],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015530884,0.00009583369,0.000087874185,0.000020024469,0.000101695245,0.000007527203,0.00013857793,0.000103492486,0.00033230594],"category_scores_gemma":[0.0000067951573,0.00007844511,0.00012062889,0.000084387444,0.000063635685,0.0000024245076,0.000010460302,0.000044143362,0.000005507621],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000020061454,0.00003658824,0.0006343962,0.0000044288086,0.000025337346,1.1651643e-7,0.00004034411,0.0009065605,0.99314696,0.0001336743,0.000043430486,0.0050080796],"study_design_scores_gemma":[0.00033030866,0.00006704895,0.0562687,0.000003289082,0.000025414343,0.000001462176,0.0000029382866,0.000029299834,0.9324843,0.00075485936,0.009944223,0.00008814888],"about_ca_topic_score_codex":0.000018007064,"about_ca_topic_score_gemma":0.000020341638,"teacher_disagreement_score":0.060662676,"about_ca_system_score_codex":0.000006921348,"about_ca_system_score_gemma":0.000031108033,"threshold_uncertainty_score":0.3638517},"labels":[],"label_agreement":null},{"id":"W1969489905","doi":"10.1016/s0378-1119(00)00239-0","title":"Sequence diversity of intervening sequences (IVSs) in the 23S ribosomal RNA in Salmonella spp.","year":2000,"lang":"en","type":"article","venue":"Gene","topic":"RNA and protein synthesis mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":12,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"National Institute of Allergy and Infectious Diseases; U.S. Public Health Service","keywords":"Biology; 23S ribosomal RNA; Salmonella; Ribosomal RNA; Sequence (biology); Genetics; Diversity (politics); RNA; Computational biology; Molecular biology; Ribosome; Gene; Bacteria","score_opus":0.02603223004541741,"score_gpt":0.2511766175347911,"score_spread":0.22514438748937368,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1969489905","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9974025,0.0006861101,0.00011036997,0.000104238745,0.000032905475,0.000112526104,0.000010377387,0.0000027157787,0.0015382628],"genre_scores_gemma":[0.99869734,0.00024268683,0.0007132917,0.000113692106,0.00004431466,0.0000078169405,0.000009954131,0.0000048587776,0.00016604291],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99922574,0.00013437633,0.00017745692,0.00019167924,0.00011082954,0.00015992293],"domain_scores_gemma":[0.99969494,0.000013500248,0.000049803093,0.00020872627,0.000013025339,0.000020008909],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00040472375,0.000084921085,0.00010708419,0.000028441866,0.00004549524,0.000007888482,0.000345801,0.000083152954,0.00012263867],"category_scores_gemma":[0.000024961222,0.000067711204,0.0000555306,0.00009959374,0.000055833287,0.000003940307,0.00009763888,0.000061621926,0.000010997113],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000547124,0.00002872622,0.0060372865,0.000008951245,0.0000070758483,0.000021246007,0.00030804277,0.00014583932,0.982089,0.00002397057,0.000026486763,0.011248671],"study_design_scores_gemma":[0.00020892441,0.00013088524,0.0049565826,0.000030861633,0.000004511471,0.000014908515,0.00015301596,0.000027929696,0.9932248,0.00053593173,0.0006118836,0.000099749835],"about_ca_topic_score_codex":0.00038830691,"about_ca_topic_score_gemma":0.00015793118,"teacher_disagreement_score":0.011148921,"about_ca_system_score_codex":0.000009408477,"about_ca_system_score_gemma":0.000022255146,"threshold_uncertainty_score":0.27611828},"labels":[],"label_agreement":null},{"id":"W1969711636","doi":"10.1016/s0378-1119(03)00455-4","title":"The Drosophila melanogaster multidrug-resistance protein 1 (MRP1) homolog has a novel gene structure containing two variable internal exons","year":2003,"lang":"en","type":"article","venue":"Gene","topic":"Drug Transport and Resistance Mechanisms","field":"Medicine","cited_by":29,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Centre National de la Recherche Scientifique; Institut national de la recherche scientifique; University of Washington","keywords":"Exon; Biology; Tandem exon duplication; Gene; Genetics; Gene isoform; Alternative splicing; Drosophila melanogaster; Exon trapping; Complementary DNA; Exon shuffling; RNA splicing; Molecular biology; RNA","score_opus":0.016637509943026752,"score_gpt":0.2345635694578488,"score_spread":0.21792605951482202,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1969711636","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9201113,0.0027753927,0.06553022,0.0017113935,0.0011473016,0.0017121936,0.0001871485,0.00016429761,0.0066607525],"genre_scores_gemma":[0.9309142,0.000020182919,0.05343256,0.00041188678,0.00026879096,0.00008413623,0.00004409375,0.000057061516,0.014767075],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9980524,0.00005785372,0.00042167798,0.00046444012,0.00038908032,0.00061450386],"domain_scores_gemma":[0.9988724,0.000048331185,0.00015594452,0.0005831333,0.00014372024,0.00019644627],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003787591,0.0003121489,0.00040356364,0.00006522403,0.00046985605,0.00008190805,0.0002468548,0.00014209654,0.00019819525],"category_scores_gemma":[0.00006751859,0.00020992526,0.00013351026,0.00020574777,0.0001927197,0.00006983412,0.000030335863,0.00041287695,0.000018593433],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005410141,0.000098464785,0.0004965162,0.000048474343,0.00017055577,0.0001789096,0.00042245132,0.000045468034,0.98728853,0.010340841,0.00016367961,0.00020510872],"study_design_scores_gemma":[0.008443572,0.00025680236,0.0016439374,0.00038967308,0.00025114877,0.00039513415,0.0004122798,0.00016273571,0.88094056,0.0057345266,0.100815065,0.0005545796],"about_ca_topic_score_codex":0.00003689253,"about_ca_topic_score_gemma":0.00036728592,"teacher_disagreement_score":0.10634797,"about_ca_system_score_codex":0.00009222562,"about_ca_system_score_gemma":0.00025653755,"threshold_uncertainty_score":0.8560504},"labels":[],"label_agreement":null},{"id":"W1970100937","doi":"10.1016/j.gene.2012.02.001","title":"Bioinformatic selection of putative epigenetically regulated loci associated with obesity using gene expression data","year":2012,"lang":"en","type":"article","venue":"Gene","topic":"Epigenetics and DNA Methylation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":6,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Biotechnology and Biological Sciences Research Council; Fonds Québécois de la Recherche sur la Nature et les Technologies; Newcastle University; Canadian Institutes of Health Research; Université Laval","keywords":"Biology; Epigenetics; Genetics; Candidate gene; Gene; DNA methylation; Promoter; DNA microarray; Computational biology; In silico; Phenotype; Bioinformatics; Gene expression","score_opus":0.03146989611860548,"score_gpt":0.28004025338178795,"score_spread":0.24857035726318247,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1970100937","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9308634,0.0008800979,0.06781716,0.000007222864,0.000055787234,0.00019105895,0.00008081214,0.000011718167,0.00009274849],"genre_scores_gemma":[0.9678692,0.00008691406,0.030027643,0.000016502076,0.0001118669,0.000003365386,0.0018193605,0.00002205938,0.000043048058],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9988538,0.00011591909,0.00030102112,0.00023651808,0.00020764662,0.00028508183],"domain_scores_gemma":[0.998985,0.000016733065,0.00026244554,0.00042964888,0.00020304584,0.00010311958],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00044653277,0.00015258802,0.00017560122,0.000051711875,0.000094549156,0.000012204601,0.00018147791,0.00017710363,0.000015597432],"category_scores_gemma":[0.00014190264,0.00013212845,0.000034180644,0.00019642012,0.00006891347,0.000019079476,0.00017004945,0.000065014996,0.0000024241938],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000485038,0.000109269204,0.022213938,0.00001235663,0.00007067746,2.2002388e-7,0.00008844735,0.0012977587,0.97547966,0.0000025201123,0.000019067613,0.00065760314],"study_design_scores_gemma":[0.0003881306,0.00019038413,0.030884322,0.000016922844,0.00006248909,0.0000035685127,0.00002566343,0.0041940697,0.96393377,0.000027650332,0.00010483061,0.00016820335],"about_ca_topic_score_codex":0.00001883305,"about_ca_topic_score_gemma":0.0000087208355,"teacher_disagreement_score":0.037789516,"about_ca_system_score_codex":0.000027534385,"about_ca_system_score_gemma":0.000083023115,"threshold_uncertainty_score":0.5388042},"labels":[],"label_agreement":null},{"id":"W1970775166","doi":"10.1016/j.gene.2008.07.023","title":"Cold acclimation-induced up-regulation of the ribosomal protein L7 gene in the freeze tolerant wood frog, Rana sylvatica","year":2008,"lang":"en","type":"article","venue":"Gene","topic":"Physiological and biochemical adaptations","field":"Environmental Science","cited_by":42,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Carleton University","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Biology; Complementary DNA; Xenopus; cDNA library; Gene; Ribosomal protein; Gene expression; Molecular biology; Rapid amplification of cDNA ends; Genetics; Ribosome; RNA; Molecular cloning","score_opus":0.027076062090432586,"score_gpt":0.20906695975822887,"score_spread":0.18199089766779628,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1970775166","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9980918,0.000014110414,0.00010019865,0.0008229569,0.00003008376,0.0004521284,0.000012758132,0.000009319192,0.00046662148],"genre_scores_gemma":[0.9989132,0.0000026999944,0.0006467263,0.00023330384,0.000032578657,0.000060931918,0.000011734372,0.0000033538256,0.0000954662],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.999115,0.00008072781,0.00021545525,0.00016010414,0.00028013048,0.00014861143],"domain_scores_gemma":[0.99961215,0.000043129527,0.00008067684,0.00022845667,0.000008923559,0.000026666186],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00010640289,0.00008253822,0.00010080858,0.000009005308,0.00014255317,0.0000057654806,0.00030080948,0.00005360787,0.0002703657],"category_scores_gemma":[0.000047438767,0.00004258245,0.000057421043,0.0003012318,0.00012970131,0.000061323044,0.00009225648,0.000088023495,0.000049472746],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000010369576,0.0000961186,0.0014391071,0.000001871926,0.0000028060897,3.9816214e-7,0.0002574688,0.0005146869,0.9972554,0.00011330924,0.00009362713,0.00021482633],"study_design_scores_gemma":[0.00020014249,0.000027623566,0.3650279,0.000004822883,0.0000037083557,0.0000017316185,0.000021753805,0.000985324,0.6322508,0.0013723753,0.000050227623,0.000053605007],"about_ca_topic_score_codex":0.00020724666,"about_ca_topic_score_gemma":0.00006015451,"teacher_disagreement_score":0.36500463,"about_ca_system_score_codex":0.000034112934,"about_ca_system_score_gemma":0.0000102025015,"threshold_uncertainty_score":0.2960315},"labels":[],"label_agreement":null},{"id":"W1971393561","doi":"10.1016/s0378-1119(01)00477-2","title":"Introns resolve the conflict between base order-dependent stem-loop potential and the encoding of RNA or protein: further evidence from overlapping genes","year":2001,"lang":"en","type":"article","venue":"Gene","topic":"RNA and protein synthesis mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":15,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Queen's University","funders":"","keywords":"Biology; Intron; Exon; Gene; Genetics; Stem-loop; RNA; Coding region","score_opus":0.03640393434244216,"score_gpt":0.2560703878214134,"score_spread":0.21966645347897124,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1971393561","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.96945,0.009374572,0.019092217,0.0012050422,0.00008381387,0.0006797453,0.000032604767,0.000008749045,0.000073277166],"genre_scores_gemma":[0.99501055,0.0018961328,0.0013934013,0.000122018384,0.00048972125,0.00008773024,0.000010311458,0.00002265309,0.0009674648],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99863434,0.00029710107,0.00028190482,0.00033587136,0.00022172272,0.00022906267],"domain_scores_gemma":[0.9990449,0.000115621406,0.00018001915,0.00052033627,0.00008357755,0.000055552144],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000673216,0.00017233277,0.00022435123,0.00002133251,0.0001761171,0.000048539176,0.00034744307,0.00012448232,0.00008882159],"category_scores_gemma":[0.00013870296,0.0000947964,0.000082087456,0.00007952883,0.00016517076,0.000007603765,0.00022243135,0.000089548324,0.0000045205384],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0004671479,0.000009856941,0.00028925124,0.000010327048,0.00012251633,0.000007397947,0.0001806096,0.000037307374,0.98499733,0.0000223549,0.000021423053,0.013834487],"study_design_scores_gemma":[0.00074547686,0.00013296209,0.00021278126,0.000074793235,0.000083600244,0.000017091386,0.0003668651,0.00007713057,0.9966026,0.000096604286,0.001443421,0.00014666574],"about_ca_topic_score_codex":0.00029591535,"about_ca_topic_score_gemma":0.000049720977,"teacher_disagreement_score":0.02556059,"about_ca_system_score_codex":0.000007650363,"about_ca_system_score_gemma":0.00007286068,"threshold_uncertainty_score":0.3865685},"labels":[],"label_agreement":null},{"id":"W1971625212","doi":"10.1016/j.gene.2005.05.045","title":"Endogenous retrovirus long terminal repeats as ready-to-use mobile promoters: The case of primate β3GAL-T5","year":2005,"lang":"en","type":"article","venue":"Gene","topic":"Chromosomal and Genetic Variations","field":"Agricultural and Biological Sciences","cited_by":50,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"BC Cancer Agency; University of British Columbia","funders":"Canadian Institutes of Health Research","keywords":"Long terminal repeat; Biology; Endogenous retrovirus; Promoter; Genetics; Gene; Provirus; Retrovirus; Germline; Retrotransposon; Baboon; Transposable element; Genome; Gene expression","score_opus":0.03308813395892363,"score_gpt":0.25403863302883645,"score_spread":0.22095049906991282,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1971625212","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9980273,0.00012858414,0.000003571076,0.00070730597,0.00006111994,0.00042606334,0.00011082943,0.000034886994,0.00050033594],"genre_scores_gemma":[0.99809796,0.000030193094,0.00066425407,0.00025300108,0.00029112468,0.000048082748,0.000030457826,0.0000013421499,0.0005835721],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9990922,0.000059699945,0.00023025539,0.0002496669,0.0001271456,0.00024100897],"domain_scores_gemma":[0.9995181,0.000081942504,0.00008732178,0.00014376253,0.00006946182,0.00009938792],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015819984,0.00011442645,0.00012964252,0.0000093232775,0.00022695775,0.000052075804,0.00019729162,0.000056442645,0.0003610342],"category_scores_gemma":[0.000041778625,0.000039668746,0.00006971093,0.000202102,0.000043770815,0.000069785776,0.00009482223,0.000066815526,0.00013290746],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000024918727,0.00012617788,0.0009207637,0.0000042277675,0.000014310203,0.00032639268,0.00058041565,0.00005259491,0.8178546,0.00003366615,0.00009775271,0.1799642],"study_design_scores_gemma":[0.00042890786,0.0024673832,0.06423341,0.000042476757,0.00011610811,0.012580251,0.0005510708,0.00018727654,0.882922,0.00029635907,0.035623226,0.0005515537],"about_ca_topic_score_codex":0.001126819,"about_ca_topic_score_gemma":0.0016194264,"teacher_disagreement_score":0.17941265,"about_ca_system_score_codex":0.000024430867,"about_ca_system_score_gemma":0.000014153264,"threshold_uncertainty_score":0.39530715},"labels":[],"label_agreement":null},{"id":"W1972430032","doi":"10.1016/s0378-1119(02)00919-8","title":"Transcriptional repression of the RET proto-oncogene by a mitogen activated protein kinase-dependent signalling pathway","year":2002,"lang":"en","type":"article","venue":"Gene","topic":"Ubiquitin and proteasome pathways","field":"Biochemistry, Genetics and Molecular Biology","cited_by":18,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Queen's University","funders":"","keywords":"Biology; Downregulation and upregulation; Transcription factor; Molecular biology; Repressor; Gene expression; Regulation of gene expression; Protein kinase A; Cell culture; Cell biology; Gene; Kinase; Genetics","score_opus":0.017706200434208536,"score_gpt":0.21226054477623083,"score_spread":0.1945543443420223,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1972430032","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9945823,0.0022651064,0.00073288055,0.00019143209,0.00010814671,0.0012993617,0.00018968231,0.00001836661,0.0006127446],"genre_scores_gemma":[0.99645585,0.000047235455,0.000478592,0.000087949935,0.00016566485,0.00032711454,0.000083129955,0.0000287605,0.0023257039],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99870706,0.00015136931,0.00026328713,0.00036916873,0.00027773133,0.00023139252],"domain_scores_gemma":[0.9992904,0.0000049609303,0.00014706005,0.0004020215,0.00008589725,0.00006962791],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00019144986,0.00016598255,0.00013942618,0.000020305888,0.00011659601,0.000013028373,0.00028655218,0.00018130854,0.00022352784],"category_scores_gemma":[0.00004655978,0.00012422113,0.00013806368,0.00009480788,0.00006215579,0.0000042733336,0.00008324135,0.00012435652,0.000009109791],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010492519,0.000106159605,0.00006591935,0.0000317643,0.000037661972,0.0000014981098,0.00011143012,0.000029819263,0.99622804,0.000010488034,0.00062152825,0.0026507648],"study_design_scores_gemma":[0.0006147963,0.00017070187,0.000031322026,0.000051882373,0.00001011265,0.0000080960335,0.000015416923,0.000056505614,0.9826636,0.00005480366,0.016163586,0.00015922451],"about_ca_topic_score_codex":0.000013192067,"about_ca_topic_score_gemma":0.000003395188,"teacher_disagreement_score":0.015542058,"about_ca_system_score_codex":0.000015342892,"about_ca_system_score_gemma":0.000043626223,"threshold_uncertainty_score":0.506559},"labels":[],"label_agreement":null},{"id":"W1972795200","doi":"10.1016/j.gene.2015.01.046","title":"Investigation of the dominant positive effect of porcine farnesoid X receptor (FXR) splice variant 1","year":2015,"lang":"en","type":"article","venue":"Gene","topic":"Drug Transport and Resistance Mechanisms","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"Natural Sciences and Engineering Research Council of Canada; University of Texas Southwestern Medical Center","keywords":"Farnesoid X receptor; Biology; Tyrosine; Amino acid; Alanine; Methionine; Receptor; Biochemistry; Alternative splicing; Endocrinology; Molecular biology; Internal medicine; Exon; Nuclear receptor; Gene","score_opus":0.012881096309637885,"score_gpt":0.2279855929183104,"score_spread":0.2151044966086725,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1972795200","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9968902,0.00041878308,0.0005094463,0.0007442791,0.00033365446,0.00045271788,0.000022804179,0.000007995007,0.00062015944],"genre_scores_gemma":[0.99810857,0.000022914784,0.0009783771,0.000085915,0.00008807683,0.000009591173,0.000031686966,0.000012828458,0.00066206447],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99919146,0.00006401457,0.0002341131,0.00013231151,0.0002638889,0.00011418624],"domain_scores_gemma":[0.9993323,0.00003142645,0.00014480729,0.00025881123,0.00013980015,0.00009286513],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00046802213,0.00010034093,0.00029137955,0.000039470156,0.000021966063,0.0000011030318,0.00008083362,0.00006475452,0.00001896847],"category_scores_gemma":[0.000048926366,0.000055174092,0.00008641215,0.00020339523,0.00008381118,0.000017799388,0.00001614679,0.00007559433,0.0000064682463],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006107058,0.00002275035,0.005283829,0.000122063015,0.00004408451,0.000009151717,0.001034169,0.000008945872,0.99196094,0.00016465966,0.00027505902,0.00046365947],"study_design_scores_gemma":[0.0018129925,0.0005289967,0.015998099,0.00020246717,0.00014472146,0.000019567062,0.00010653285,0.000029959032,0.9807267,0.000117266594,0.00025652026,0.000056148867],"about_ca_topic_score_codex":0.00007866828,"about_ca_topic_score_gemma":0.0000109594675,"teacher_disagreement_score":0.011234194,"about_ca_system_score_codex":0.000030359006,"about_ca_system_score_gemma":0.00011017201,"threshold_uncertainty_score":0.22499342},"labels":[],"label_agreement":null},{"id":"W1974665005","doi":"10.1016/s0378-1119(00)00302-4","title":"Sp1 and Sp3 transactivate the RET proto-oncogene promoter","year":2000,"lang":"en","type":"article","venue":"Gene","topic":"Genomics and Chromatin Dynamics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":46,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Queen's University","funders":"","keywords":"Transactivation; Biology; Neural crest; Promoter; Molecular biology; Transcription factor; Footprinting; DNA footprinting; Luciferase; Transcription (linguistics); Response element; DNA-binding protein; Cell culture; Cell biology; Transfection; Gene expression; Genetics; Gene","score_opus":0.003968612472087771,"score_gpt":0.19289077693624482,"score_spread":0.18892216446415705,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1974665005","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99716985,0.0003854356,0.00030003855,0.00040231063,0.000031536074,0.0003828988,0.000022284763,0.0000069419316,0.0012987015],"genre_scores_gemma":[0.995679,0.00042587734,0.0011565504,0.00031283157,0.00015072447,0.000052679836,0.00004285323,0.00002035316,0.002159128],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9994169,0.000025948593,0.00011217082,0.00021918792,0.000059222097,0.0001665849],"domain_scores_gemma":[0.9996271,0.0000022502525,0.00002535384,0.00028389978,0.000016425698,0.00004495718],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000099485726,0.00010696889,0.000076581804,0.0000074927602,0.00008587684,0.000025590933,0.0001276505,0.0000798768,0.00011435061],"category_scores_gemma":[0.0000029025016,0.00007649024,0.00004142139,0.0000317503,0.00005575554,0.0000013897603,0.000023758004,0.000054437223,0.00001391262],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000042153806,0.000023041453,0.00018411722,0.000009700148,0.000031030784,0.00000217231,0.000089302266,0.00004442278,0.96824545,0.000007876015,0.00018605482,0.031134695],"study_design_scores_gemma":[0.0005678823,0.0002324131,0.001960565,0.000006174397,0.000022053564,0.00009313786,0.000023551489,0.00048224497,0.8961141,0.0003541333,0.09992063,0.00022310014],"about_ca_topic_score_codex":0.000007675188,"about_ca_topic_score_gemma":0.00001203277,"teacher_disagreement_score":0.09973458,"about_ca_system_score_codex":0.0000049439977,"about_ca_system_score_gemma":0.000025031679,"threshold_uncertainty_score":0.31191814},"labels":[],"label_agreement":null},{"id":"W1974758737","doi":"10.1016/s0378-1119(02)00672-8","title":"The odorant-binding proteins of Drosophila melanogaster : annotation and characterization of a divergent gene family","year":2002,"lang":"en","type":"article","venue":"Gene","topic":"Neurobiology and Insect Physiology Research","field":"Neuroscience","cited_by":106,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Queen's University","funders":"Killam Trusts","keywords":"Biology; Odorant-binding protein; Drosophila melanogaster; Lipocalin; Gene; Melanogaster; Genetics; Insect; Gene family; Biochemistry; Genome; Botany","score_opus":0.047514846823403026,"score_gpt":0.2543208534616285,"score_spread":0.20680600663822551,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1974758737","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9992505,0.00004921944,0.000032793534,0.0001784512,0.00009902435,0.00025261758,0.000038601975,0.000007712663,0.00009111191],"genre_scores_gemma":[0.9991081,0.000538842,0.000018750769,0.00008196934,0.000026904137,0.00001626077,0.0000062125855,0.000005573569,0.00019739308],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9992515,0.00016669865,0.00016602156,0.00017507176,0.00009713469,0.00014357602],"domain_scores_gemma":[0.9996114,0.00007654095,0.00010990867,0.00014188328,0.00003746122,0.00002280021],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00010926236,0.00006334127,0.000102024416,0.000049264647,0.00016327598,0.00000682845,0.0001226201,0.000043045904,0.00001977185],"category_scores_gemma":[0.000063705906,0.000044800105,0.000023314728,0.00013753131,0.00022021437,0.000074069096,0.000072145216,0.0000755291,0.00001185775],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000045097295,0.000034080134,0.0006181976,0.000009975944,0.0000038599,0.0000016936615,0.00021523047,0.0000018829014,0.99796665,0.000102402846,0.000008185309,0.0009927197],"study_design_scores_gemma":[0.00018773742,0.00018494739,0.037742935,0.0000053179856,0.000003492268,0.00000636069,0.0000059191975,0.0002711165,0.9614068,0.00007856715,0.00006977351,0.00003700429],"about_ca_topic_score_codex":0.0000020577054,"about_ca_topic_score_gemma":3.2930146e-7,"teacher_disagreement_score":0.037124738,"about_ca_system_score_codex":0.0000043215896,"about_ca_system_score_gemma":0.000006850295,"threshold_uncertainty_score":0.18268952},"labels":[],"label_agreement":null},{"id":"W1975431885","doi":"10.1016/j.gene.2006.04.015","title":"The modification of Sp3 isoforms by SUMOylation has differential effects on the SRC1A promoter","year":2006,"lang":"en","type":"article","venue":"Gene","topic":"Ubiquitin and proteasome pathways","field":"Biochemistry, Genetics and Molecular Biology","cited_by":9,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan; Saskatchewan Cancer Agency","funders":"","keywords":"SUMO protein; Gene isoform; Biology; Promoter; Activator (genetics); Gene; Gene expression; Molecular biology; Computational biology; Genetics","score_opus":0.011941986311821624,"score_gpt":0.21611725627200504,"score_spread":0.20417526996018343,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1975431885","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.994843,0.00025692148,0.0031006976,0.0006880921,0.00008645372,0.000333272,0.00001802926,0.0000061438495,0.0006673863],"genre_scores_gemma":[0.9987951,0.000028424782,0.00004164525,0.000058874135,0.00022331797,0.000050267692,0.00019587902,0.000009493375,0.0005970336],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.999473,0.00005402174,0.00011661653,0.00013253288,0.00010149995,0.00012235237],"domain_scores_gemma":[0.99959266,0.000022237842,0.000074930926,0.0002635881,0.000032304783,0.000014270334],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00010931457,0.00007951763,0.00005328423,0.000008024916,0.00015707861,0.00002687584,0.00012585241,0.00006870578,0.000008816966],"category_scores_gemma":[0.000022019161,0.000042445976,0.00004814798,0.000031785603,0.000054406464,0.0000014075997,0.000027932638,0.00004541648,0.000008354528],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00003965381,0.000030403577,0.00012261697,0.000007795907,0.000010249181,7.056371e-8,0.000016847458,0.000008502023,0.9904624,0.0003335148,0.0026950096,0.0062728925],"study_design_scores_gemma":[0.00018258345,0.00015370462,0.002161644,0.000004887279,0.000006740802,8.0725573e-7,0.000003999676,0.0001327465,0.9885699,0.00058085157,0.008144158,0.000057938167],"about_ca_topic_score_codex":0.000018326584,"about_ca_topic_score_gemma":0.000008339093,"teacher_disagreement_score":0.0062149544,"about_ca_system_score_codex":0.0000055119503,"about_ca_system_score_gemma":0.000014295354,"threshold_uncertainty_score":0.17308967},"labels":[],"label_agreement":null},{"id":"W1975960647","doi":"10.1016/j.gene.2009.11.002","title":"Analysis of ribosomal RNA transcription termination and 3′ end processing in Leishmania amazonensis","year":2009,"lang":"en","type":"article","venue":"Gene","topic":"RNA and protein synthesis mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":5,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Canadian Institutes of Health Research; Fogarty International Center; National Institutes of Health; Fondo Nacional de Ciencia Tecnología e Innovación","keywords":"Biology; Ribosome biogenesis; Transcription (linguistics); Ribosomal RNA; Terminator (solar); RNA polymerase III; Promoter; Genetics; RNA polymerase II; Ribosome; Gene; RNA polymerase I; RNA; Gene expression; Molecular biology; RNA polymerase","score_opus":0.008539242479703828,"score_gpt":0.233052652031551,"score_spread":0.22451340955184718,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1975960647","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9958691,0.0007967469,0.0029746646,0.000080911996,0.000012785311,0.00006817936,0.000008536054,0.0000032664832,0.00018583462],"genre_scores_gemma":[0.99821305,0.00011973345,0.0014761359,0.00005369994,0.00002717239,0.000003458572,0.00005938375,0.000003861956,0.00004350867],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9995002,0.000028850918,0.00015111895,0.00016485473,0.00006814545,0.000086789325],"domain_scores_gemma":[0.9997971,0.0000016852736,0.000058892452,0.00009288753,0.000028565497,0.000020865644],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013415638,0.000064677224,0.00012120742,0.000113350594,0.000022011694,0.000009576344,0.00004308032,0.00007695667,0.0000085180645],"category_scores_gemma":[0.000012243318,0.000064731794,0.00004373946,0.00016363096,0.000015854554,0.0000043810005,0.0000061103333,0.000020007466,2.9476743e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00002542499,0.000022313321,0.0007474389,0.0000052669047,0.000018146695,9.5184095e-7,0.00006913699,0.00003186867,0.8639121,0.000008391818,0.0000018572645,0.13515711],"study_design_scores_gemma":[0.00015901419,0.00010196088,0.08395254,0.000007396593,0.00009128042,0.0000019333506,0.000019158551,0.00039266248,0.91503876,0.00007468476,0.000091531394,0.00006907685],"about_ca_topic_score_codex":0.000012796398,"about_ca_topic_score_gemma":0.00003995458,"teacher_disagreement_score":0.13508804,"about_ca_system_score_codex":0.000004699625,"about_ca_system_score_gemma":0.000011385804,"threshold_uncertainty_score":0.2639686},"labels":[],"label_agreement":null},{"id":"W1976235300","doi":"10.1016/j.gene.2013.12.020","title":"Bovine CLEC7A genetic variants and their association with seropositivity in Johne's disease ELISA","year":2014,"lang":"en","type":"article","venue":"Gene","topic":"Mycobacterium research and diagnosis","field":"Medicine","cited_by":17,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"","keywords":"Biology; Single-nucleotide polymorphism; Paratuberculosis; SNP; Population; Genetics; Genotype; Immunology; Gene; Mycobacterium; Medicine","score_opus":0.006826453453744892,"score_gpt":0.23042314614947954,"score_spread":0.22359669269573465,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1976235300","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99691254,0.00022691472,0.00042422654,0.0016638883,0.000030041792,0.00022913032,0.000027500193,0.000019760304,0.0004660176],"genre_scores_gemma":[0.99839616,0.0002330026,0.00044659685,0.00050895294,0.00015144222,0.000026231952,0.00003278048,0.0000124609305,0.00019238763],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9991596,0.00010514545,0.000099180645,0.00019733436,0.0001882997,0.00025049306],"domain_scores_gemma":[0.9993429,0.00010543427,0.000036222846,0.00018198891,0.000058494472,0.0002749367],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00027885413,0.00009269179,0.00016618856,0.000064796615,0.00003741449,0.00002684632,0.00003428413,0.000043032378,0.00007472529],"category_scores_gemma":[0.00029754252,0.0000662927,0.000019630748,0.00012315242,0.000019441539,0.000053108808,0.000033502412,0.00009769618,0.000020074045],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00042746915,0.00013599546,0.9688789,0.00004855764,0.000027216116,0.000038046695,0.00006334518,0.0000025114828,0.022912746,0.000009332994,0.0005814386,0.006874441],"study_design_scores_gemma":[0.0013719978,0.00032514348,0.9896455,0.00005040771,0.000027165983,0.0000069103316,0.000007346717,0.0007367068,0.007121728,0.00007495541,0.00055496267,0.00007721978],"about_ca_topic_score_codex":0.0001699435,"about_ca_topic_score_gemma":0.0001309603,"teacher_disagreement_score":0.020766556,"about_ca_system_score_codex":0.00008450183,"about_ca_system_score_gemma":0.00007355635,"threshold_uncertainty_score":0.27033377},"labels":[],"label_agreement":null},{"id":"W1976708245","doi":"10.1016/j.gene.2004.10.016","title":"Drag&amp;Drop cloning in yeast","year":2004,"lang":"en","type":"article","venue":"Gene","topic":"Fungal and yeast genetics research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":181,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Royal Victoria Hospital; Biotechnology Research Institute; McGill University","funders":"Natural Sciences and Engineering Research Council of Canada; Deutsche Forschungsgemeinschaft","keywords":"Biology; Multiple cloning site; Selectable marker; Cloning (programming); Genetics; Saccharomyces cerevisiae; Gene; Computational biology; Homologous recombination; Expression cloning; Cloning vector; Expression vector; Molecular cloning; Shuttle vector; Vector (molecular biology); Plasmid; Complementary DNA; Recombinant DNA; Computer science","score_opus":0.016798888239922646,"score_gpt":0.28281358243252663,"score_spread":0.266014694192604,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1976708245","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9946926,0.0009848345,0.0010673804,0.00019280647,0.00009130261,0.00008119465,0.000009937391,0.0000066013254,0.0028733264],"genre_scores_gemma":[0.9957198,0.00016400812,0.0023147445,0.00013157031,0.00022173383,0.000012201432,0.00007019707,0.000016095348,0.001349634],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9992347,0.000020638307,0.00011161532,0.00023825037,0.00012374193,0.00027105623],"domain_scores_gemma":[0.99963164,0.0000018206415,0.000016624695,0.00023849652,0.000035117995,0.00007629518],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00010867451,0.000086943954,0.000074577554,0.000046500387,0.00003807605,0.000016685219,0.00015189707,0.00008825721,0.000037460362],"category_scores_gemma":[0.00003404949,0.00008471249,0.000041407613,0.00011357158,0.000039789335,0.0000012033288,0.00012082914,0.00008898561,0.0001463372],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00002852739,0.00004033973,0.0015026414,0.0000056075232,0.0000075784465,0.000007936408,0.00004027874,0.0013019284,0.99560475,0.000038774084,0.00017602342,0.0012455937],"study_design_scores_gemma":[0.0006560644,0.000102073194,0.0041263425,0.000010258659,0.000001932693,0.000021617814,0.000018870534,0.000013254809,0.96709037,0.00024604666,0.027575806,0.00013739239],"about_ca_topic_score_codex":0.00006373779,"about_ca_topic_score_gemma":0.0002211342,"teacher_disagreement_score":0.02851443,"about_ca_system_score_codex":0.000018714663,"about_ca_system_score_gemma":0.00008854772,"threshold_uncertainty_score":0.3454475},"labels":[],"label_agreement":null},{"id":"W1976859104","doi":"10.1016/j.gene.2008.08.014","title":"Evolutionary mechanisms underlying the functional divergence of duplicate genes involved in vertebrates' circadian rhythm pathway","year":2008,"lang":"en","type":"article","venue":"Gene","topic":"Circadian rhythm and melatonin","field":"Neuroscience","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université du Québec à Montréal","funders":"","keywords":"Biology; Gene duplication; Circadian rhythm; Functional divergence; Gene; Natural selection; Circadian clock; Evolutionary biology; Bacterial circadian rhythms; Molecular evolution; Genetics; Molecular clock; CLOCK; Gene family; Selection (genetic algorithm); Phylogenetics; Genome; Neuroscience","score_opus":0.07425662543638141,"score_gpt":0.2406254621089779,"score_spread":0.1663688366725965,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1976859104","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99359345,0.001422888,0.0033665241,0.00032380733,0.0005404722,0.0002438327,0.000033841283,0.000044629884,0.00043056672],"genre_scores_gemma":[0.99831057,0.0004354363,0.0002623295,0.00046012676,0.00004806835,0.000046447494,0.0000071462077,0.00001722455,0.0004126501],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99857646,0.00009598359,0.00027815675,0.00039467847,0.00031817443,0.0003365521],"domain_scores_gemma":[0.999307,0.00011857495,0.00009969045,0.00033851652,0.00003893104,0.00009729633],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014728602,0.0001448953,0.00016040915,0.00012142624,0.0003219603,0.000008744445,0.00021254011,0.00008336556,0.00016256103],"category_scores_gemma":[0.00007729098,0.00012224761,0.0000831449,0.00052630954,0.00020479954,0.00014846207,0.00008947741,0.00016092122,0.00015455375],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000017991046,0.0000508258,0.005019061,0.00000786155,0.0000043188966,0.0000769942,0.00034628622,0.00071955606,0.96641535,0.026359387,0.0001480367,0.0008343618],"study_design_scores_gemma":[0.0004005834,0.000040774223,0.23145242,0.000013913639,0.0000048747615,0.00030135084,0.00008894308,0.0027224412,0.7601141,0.0036123826,0.0010614509,0.00018678428],"about_ca_topic_score_codex":0.00007049475,"about_ca_topic_score_gemma":0.000031731284,"teacher_disagreement_score":0.22643337,"about_ca_system_score_codex":0.00007033531,"about_ca_system_score_gemma":0.00020786154,"threshold_uncertainty_score":0.4985113},"labels":[],"label_agreement":null},{"id":"W1977247906","doi":"10.1016/s0378-1119(03)00680-2","title":"The regulation of retina specific expression of rhodopsin gene in vertebrates","year":2003,"lang":"en","type":"article","venue":"Gene","topic":"Retinal Development and Disorders","field":"Biochemistry, Genetics and Molecular Biology","cited_by":16,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary; University of British Columbia","funders":"Industry Canada; Government of the United Kingdom","keywords":"Rhodopsin; Biology; Fugu; Intron; Gene; Genetics; Conserved sequence; Reporter gene; Gene expression; Opsin; Vertebrate; Retinal; Peptide sequence","score_opus":0.008400922079781062,"score_gpt":0.2157803326468736,"score_spread":0.20737941056709253,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1977247906","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9948138,0.0022768134,0.0003365017,0.0000313444,0.00006152399,0.00007747886,0.0000012808783,0.0000013566591,0.0023998737],"genre_scores_gemma":[0.9966232,0.0009070854,0.002077511,0.000007979076,0.000013399855,0.0000039024117,0.000030508396,0.000005754977,0.00033061206],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99948436,0.000055582885,0.00017759734,0.00011401244,0.00007719742,0.00009124949],"domain_scores_gemma":[0.9996952,0.000009459444,0.00007491126,0.00016599389,0.000040583716,0.000013848974],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00019635822,0.000056544453,0.000068951944,0.000020406884,0.000027189735,0.000003550103,0.0000735942,0.000053502827,0.000017062403],"category_scores_gemma":[0.000051272113,0.00004227315,0.00002859264,0.000078795776,0.000046415294,0.0000015308174,0.000021236112,0.000020994821,0.0000016574311],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00005950904,0.000016897795,0.007590597,0.00000506124,0.0000027849524,1.4988453e-7,0.000031085397,0.000034998382,0.99054384,0.00013252541,0.0008008435,0.0007816971],"study_design_scores_gemma":[0.0002390182,0.000041260057,0.03248721,0.00000917112,0.0000012429778,0.0000011391351,0.000054633238,0.000006232829,0.9594629,0.00041649834,0.00723093,0.000049811308],"about_ca_topic_score_codex":0.000002933496,"about_ca_topic_score_gemma":0.000005612696,"teacher_disagreement_score":0.031080998,"about_ca_system_score_codex":0.000003862096,"about_ca_system_score_gemma":0.000028342985,"threshold_uncertainty_score":0.1723849},"labels":[],"label_agreement":null},{"id":"W1977865893","doi":"10.1016/j.gene.2009.03.022","title":"Use of the native flp gene to generate in-frame unmarked mutations in Streptomyces spp.","year":2009,"lang":"en","type":"article","venue":"Gene","topic":"Microbial Natural Products and Biosynthesis","field":"Medicine","cited_by":14,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Streptomyces coelicolor; Streptomyces clavuligerus; Biology; Streptomyces; Plasmid; Mutant; Genetics; Gene; Streptomycetaceae; Actinomycetales; Bacteria","score_opus":0.025717025453443728,"score_gpt":0.26533169233357656,"score_spread":0.23961466688013283,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1977865893","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9916721,0.0002622094,0.000005653587,0.0073937024,0.0000921105,0.00041159807,0.000031031723,0.000008611703,0.00012296159],"genre_scores_gemma":[0.99409187,0.00006950213,0.0033518216,0.001420366,0.00009237342,0.0000012626223,0.000012420034,0.0000065179865,0.00095383904],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9991981,0.000059656897,0.00024380458,0.00020892844,0.00012636064,0.0001631555],"domain_scores_gemma":[0.9995143,0.000041973854,0.000060032424,0.00024254844,0.00009547822,0.000045711033],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014218908,0.00009827905,0.00019696061,0.00013151561,0.000027457212,0.000010776558,0.000090065085,0.00005934451,0.00008935299],"category_scores_gemma":[0.0003409488,0.00006239911,0.000048038695,0.0005994953,0.000032875698,0.00005101048,0.000030409868,0.00012412504,0.000010411072],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008396816,0.000099308825,0.0017296107,0.000008671863,0.000013606041,0.000009666518,0.00035763648,0.00023810133,0.988856,0.000023245299,0.0008225259,0.007757633],"study_design_scores_gemma":[0.00029335372,0.00007283092,0.14143042,0.00006163498,0.000017865637,0.0000061956816,0.000032573207,0.00007379831,0.8564383,0.0000624361,0.0014383232,0.00007231742],"about_ca_topic_score_codex":0.00016179093,"about_ca_topic_score_gemma":0.00019028054,"teacher_disagreement_score":0.1397008,"about_ca_system_score_codex":0.000055380337,"about_ca_system_score_gemma":0.00006478565,"threshold_uncertainty_score":0.25445616},"labels":[],"label_agreement":null},{"id":"W1979023041","doi":"10.1016/j.gene.2014.01.009","title":"Altered gene dosage confirms the genetic interaction between FIAT and αNAC","year":2014,"lang":"en","type":"article","venue":"Gene","topic":"Bone Metabolism and Diseases","field":"Biochemistry, Genetics and Molecular Biology","cited_by":7,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Montreal Children's Hospital; Shriners Hospitals for Children - Canada","funders":"National Institutes of Health; Réseau de Recherche en Santé Buccodentaire et Osseuse; National Institute of Arthritis and Musculoskeletal and Skin Diseases; Shriners Hospitals for Children; McGill University","keywords":"Biology; Osteocalcin; Gene expression; Cell biology; Heterozygote advantage; Gene; Phenotype; Allele; Genetics; Biochemistry; Alkaline phosphatase; Enzyme","score_opus":0.00968029895410689,"score_gpt":0.23852172573692548,"score_spread":0.2288414267828186,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1979023041","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99298,0.0030960208,0.0029705868,0.00019680796,0.00022715413,0.00011415115,0.000038134855,0.000010691816,0.00036642834],"genre_scores_gemma":[0.9970751,0.00038262288,0.0004734913,0.0005110821,0.0011544686,0.000014290627,0.00013469545,0.000014900088,0.0002393528],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99930084,0.00007801028,0.00013474205,0.00024738847,0.00007567297,0.00016334075],"domain_scores_gemma":[0.99948233,0.000016886524,0.000054331627,0.0003330362,0.00002733527,0.00008610626],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009974684,0.000116592746,0.00011303902,0.000017237558,0.00009333282,0.00003620895,0.00011903657,0.00006884278,0.000025651008],"category_scores_gemma":[0.000040225543,0.000084240106,0.000052103675,0.00003306409,0.0000669643,0.0000028280092,0.00009821841,0.00004880941,0.000019091278],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00004784681,0.000024180144,0.009820367,0.000012147545,0.00006034294,9.2150424e-7,0.00004620243,0.000024240719,0.9515615,0.000028679613,0.002569403,0.035804167],"study_design_scores_gemma":[0.00067990937,0.0001315592,0.19222274,0.000004612329,0.00010091989,0.00001966017,0.000033676934,0.000080359154,0.6743869,0.00023640349,0.13188955,0.00021366245],"about_ca_topic_score_codex":0.000036461202,"about_ca_topic_score_gemma":0.000012049195,"teacher_disagreement_score":0.27717456,"about_ca_system_score_codex":0.000002492715,"about_ca_system_score_gemma":0.000015758476,"threshold_uncertainty_score":0.34352118},"labels":[],"label_agreement":null},{"id":"W1979818665","doi":"10.1016/s0378-1119(01)00851-4","title":"Genomic organization and functional expression of differentially regulated cysteine protease genes of Leishmania donovani complex","year":2002,"lang":"en","type":"article","venue":"Gene","topic":"Research on Leishmaniasis Studies","field":"Medicine","cited_by":49,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"Canadian Institutes of Health Research","keywords":"Biology; Gene; Gene cluster; Complementary DNA; Molecular biology; Gene expression; Untranslated region; Genetics; Cysteine protease; Protease; Biochemistry; RNA","score_opus":0.0420576783485743,"score_gpt":0.25300305080593466,"score_spread":0.21094537245736036,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1979818665","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9968396,0.0013586022,0.00073935755,0.0002822284,0.000041590727,0.00052766537,0.000020362417,0.000030928724,0.0001596582],"genre_scores_gemma":[0.9966836,0.00048208528,0.0018863005,0.000020585852,0.000112044676,0.000010816088,0.000085023,0.000025830099,0.0006937038],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9988695,0.000050655857,0.00034981917,0.00022890768,0.00034134265,0.00015982447],"domain_scores_gemma":[0.9990085,0.00002775871,0.00015824595,0.00025463995,0.00046674637,0.00008413749],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009594621,0.00012764902,0.00033969447,0.00013870663,0.00007497525,0.000007721684,0.00005841658,0.000061229526,0.00082150253],"category_scores_gemma":[0.00012096434,0.00010562566,0.000037128353,0.00023844761,0.00013185685,0.00005125915,0.0001334543,0.00006847469,0.000010299116],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013754208,0.00018386493,0.027881637,0.00022012883,0.00007551342,0.0000063660673,0.000164542,0.000016460297,0.9685404,0.000031718468,0.001121556,0.0016203233],"study_design_scores_gemma":[0.0016100437,0.00028772771,0.37808928,0.000059999322,0.00005110785,0.000044768112,0.000038017337,0.0004478069,0.61904144,0.000018951532,0.00023431452,0.00007656536],"about_ca_topic_score_codex":0.000019730349,"about_ca_topic_score_gemma":0.0000036193148,"teacher_disagreement_score":0.35020766,"about_ca_system_score_codex":0.0000357878,"about_ca_system_score_gemma":0.000028396022,"threshold_uncertainty_score":0.8994877},"labels":[],"label_agreement":null},{"id":"W1980057843","doi":"10.1016/j.gene.2007.09.019","title":"Status of genes encoding the mitochondrial S1 ribosomal protein in closely-related legumes","year":2007,"lang":"en","type":"article","venue":"Gene","topic":"Photosynthetic Processes and Mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":12,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Ottawa","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Biology; Gene; Genetics; Mitochondrial DNA; Pseudogene; Intron; Ribosomal RNA; MT-RNR1; Coding region; Nuclear gene; Exon; Genome","score_opus":0.008377308393680834,"score_gpt":0.24488417656122133,"score_spread":0.2365068681675405,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1980057843","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9957974,0.0011022591,0.0016504558,0.000042492517,0.00022295915,0.0003074817,0.000017051567,0.0000074530058,0.00085245003],"genre_scores_gemma":[0.997919,0.00021527075,0.0013609341,0.000040691724,0.00014826746,0.000021037153,0.000035494508,0.000015123159,0.00024416318],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.998975,0.000029944304,0.0002668138,0.00022567122,0.00012465016,0.0003779434],"domain_scores_gemma":[0.9995385,0.000010658133,0.00009806417,0.00024264243,0.000048253816,0.00006187567],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00019201558,0.0001162585,0.00012428791,0.000040602845,0.0000473233,0.0000084957965,0.00018741995,0.00013522094,0.000026669393],"category_scores_gemma":[0.00007629341,0.00008776187,0.00006406047,0.00011961698,0.000058681224,0.0000028337793,0.00008718916,0.00007845325,0.000005707142],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011038969,0.00004357238,0.00015770453,0.0000126656305,0.000019617737,0.0000048939737,0.000095690906,0.000012765076,0.9945154,0.00028141186,0.00001170468,0.004734176],"study_design_scores_gemma":[0.00052231044,0.00014341313,0.00013095803,0.00001669743,0.000008916314,0.0000114950035,0.00012848938,0.000015199018,0.9890716,0.00064562506,0.0091953445,0.00010991555],"about_ca_topic_score_codex":0.00008533734,"about_ca_topic_score_gemma":0.00015436749,"teacher_disagreement_score":0.00918364,"about_ca_system_score_codex":0.000012547089,"about_ca_system_score_gemma":0.00010189104,"threshold_uncertainty_score":0.35788253},"labels":[],"label_agreement":null},{"id":"W1980848179","doi":"10.1016/j.gene.2005.09.003","title":"Transcription of two human genes from a bidirectional endogenous retrovirus promoter","year":2005,"lang":"en","type":"article","venue":"Gene","topic":"Chromosomal and Genetic Variations","field":"Agricultural and Biological Sciences","cited_by":98,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Victoria; University of British Columbia; BC Cancer Agency","funders":"Canadian Institutes of Health Research; BC Cancer Foundation; University of British Columbia","keywords":"Biology; Promoter; Endogenous retrovirus; Long terminal repeat; Gene; Genetics; Transcription (linguistics); Retrovirus; Human genome; Genome; Transcription factor; Regulation of gene expression; Molecular biology; Gene expression","score_opus":0.043218890932676925,"score_gpt":0.23307622196307656,"score_spread":0.18985733103039965,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1980848179","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99808323,0.0004470708,0.000012638802,0.00044425027,0.00008054896,0.00009564347,0.00016915207,0.000031891643,0.0006355731],"genre_scores_gemma":[0.997782,0.000026638754,0.0009582735,0.000064481435,0.00080798456,0.000010635476,0.00014706384,6.415442e-7,0.00020230754],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9994161,0.00002912107,0.00015603399,0.00016022901,0.0001252425,0.00011324885],"domain_scores_gemma":[0.99982053,0.0000179145,0.00004652346,0.00003813286,0.00003708514,0.000039819282],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00004828963,0.00006979789,0.00009058899,0.0000073104907,0.000121911966,0.000012475184,0.00008858316,0.000040769744,0.0016270423],"category_scores_gemma":[0.0000027655071,0.00002988886,0.000071609844,0.00010725557,0.000021927219,0.00003965278,0.000013307304,0.000034600704,0.000041144827],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000005138507,0.00008109128,0.0019640024,6.291495e-7,0.000011520188,5.0310393e-7,0.00008256092,0.00001735851,0.9414907,0.00006315348,0.000019395662,0.05626393],"study_design_scores_gemma":[0.0002192189,0.00014597102,0.08751205,0.0000039534016,0.000020352996,0.000009206375,0.000014175451,0.000049515267,0.8972078,0.0012667372,0.013448346,0.00010266579],"about_ca_topic_score_codex":0.000949285,"about_ca_topic_score_gemma":0.002157951,"teacher_disagreement_score":0.08554805,"about_ca_system_score_codex":0.000014616555,"about_ca_system_score_gemma":0.000005068051,"threshold_uncertainty_score":0.9992856},"labels":[],"label_agreement":null},{"id":"W1981392316","doi":"10.1016/j.gene.2013.09.122","title":"The calcium-sensing receptor R990G polymorphism is associated with increased risk of hypertriglyceridemia in obese Chinese","year":2013,"lang":"en","type":"article","venue":"Gene","topic":"Parathyroid Disorders and Treatments","field":"Medicine","cited_by":4,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"National Research Council Canada","funders":"Program for New Century Excellent Talents in University; Harbin Medical University","keywords":"Internal medicine; Endocrinology; Biology; Triglyceride; Obesity; Body mass index; Overweight; Hypertriglyceridemia; Genotype; Lipid profile; Polymorphism (computer science); Medicine; Cholesterol; Genetics","score_opus":0.009803721478437638,"score_gpt":0.24357794304410554,"score_spread":0.2337742215656679,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1981392316","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99453956,0.0036403816,0.000013117225,0.00047732587,0.000050981267,0.0004178442,0.000029931318,0.000022645287,0.0008081867],"genre_scores_gemma":[0.9983141,0.00029075917,0.00042120897,0.00027128108,0.000037040412,0.00001705569,0.00004132212,0.000023001829,0.00058424106],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9989658,0.00008872507,0.0002614778,0.00019408819,0.00022018047,0.00026972228],"domain_scores_gemma":[0.9991434,0.00016421844,0.000164939,0.00031463563,0.000105784595,0.000106977175],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00016356907,0.00016646645,0.00033380906,0.00006635838,0.00009644997,0.0000126592995,0.00006468757,0.000090638685,0.000052457042],"category_scores_gemma":[0.00032224535,0.000089258225,0.00007049727,0.00034143127,0.00008532853,0.0000502161,0.000024136101,0.0001488736,0.00007801351],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00045047252,0.00038219703,0.9044979,0.0000041118733,0.00042801243,0.000040925454,0.00050093513,0.0000059100075,0.084242895,0.0000027343185,0.006429791,0.0030141056],"study_design_scores_gemma":[0.007484322,0.00032507227,0.9678795,0.00004811984,0.00014275649,0.000021640632,0.00011618557,0.0011223453,0.02229717,0.00016964793,0.0002347697,0.00015851996],"about_ca_topic_score_codex":0.008136808,"about_ca_topic_score_gemma":0.0002916853,"teacher_disagreement_score":0.063381545,"about_ca_system_score_codex":0.00008722034,"about_ca_system_score_gemma":0.00009785306,"threshold_uncertainty_score":0.9984681},"labels":[],"label_agreement":null},{"id":"W1981534902","doi":"10.1016/s0378-1119(03)00737-6","title":"A single amino acid substitution in MSH5 results in DNA alkylation tolerance","year":2003,"lang":"en","type":"article","venue":"Gene","topic":"Genetic factors in colorectal cancer","field":"Medicine","cited_by":14,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"Canadian Institutes of Health Research; University of Manitoba","keywords":"Biology; Gene; DNA repair; Mutation; Mutant; Genetics; DNA; Point mutation; Saccharomyces cerevisiae; Alkylation; Biochemistry","score_opus":0.02877044697936608,"score_gpt":0.26417732996062326,"score_spread":0.23540688298125717,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1981534902","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9892641,0.00073381694,0.0001376628,0.00018402527,0.00035759216,0.00029995397,0.000004670547,0.000021386752,0.008996796],"genre_scores_gemma":[0.99751127,0.000035709836,0.0019367064,0.00015581654,0.000060118447,0.000025663423,0.000022592376,0.000010240672,0.00024185587],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99905133,0.000047071073,0.0002720586,0.00024513152,0.00017602892,0.00020840112],"domain_scores_gemma":[0.9996344,0.00002243906,0.000049000682,0.00020676121,0.00003964085,0.00004774496],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00022199708,0.00009558841,0.0001575341,0.00012340548,0.000016973303,0.0000065661034,0.000038986527,0.00009518252,0.000056855435],"category_scores_gemma":[0.00029935027,0.00009705299,0.000024641255,0.00036258285,0.000034048287,0.00004383822,0.000007026824,0.000117499585,0.00003139939],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00039318646,0.000150681,0.02976748,0.000023628047,0.00000387138,0.000037998732,0.00053804537,0.00076340925,0.96265835,0.00005656291,0.00016310101,0.005443688],"study_design_scores_gemma":[0.0022345933,0.00018133933,0.19721103,0.00007197235,0.0000059854888,0.00002074314,0.000023938102,0.00016981657,0.7949165,0.00012437273,0.0049416623,0.00009801186],"about_ca_topic_score_codex":0.000052905576,"about_ca_topic_score_gemma":0.00049947953,"teacher_disagreement_score":0.1677418,"about_ca_system_score_codex":0.0003234504,"about_ca_system_score_gemma":0.00009400086,"threshold_uncertainty_score":0.39577058},"labels":[],"label_agreement":null},{"id":"W1982184746","doi":"10.1016/s0378-1119(03)00749-2","title":"Comparison of gene representation in midguts from two phytophagous insects, Bombyx mori and Ips pini, using expressed sequence tags","year":2003,"lang":"en","type":"article","venue":"Gene","topic":"Insect Resistance and Genetics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":45,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Natural Sciences and Engineering Research Council of Canada; Cooperative State Research, Education, and Extension Service; U.S. Department of Agriculture","keywords":"Biology; Bombyx mori; Expressed sequence tag; Midgut; Gene; Juvenile hormone; Insect; Genetics; Computational biology; Botany; Gene expression; Larva","score_opus":0.05243633574186223,"score_gpt":0.3500465454338916,"score_spread":0.29761020969202934,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1982184746","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99100393,0.0068825125,0.0016140547,0.0000073668552,0.000121750134,0.00015086294,0.000044969183,0.0000048816614,0.00016969432],"genre_scores_gemma":[0.98749655,0.00035315243,0.011803,0.00006410488,0.00010742402,0.0000073199963,0.00011551531,0.000016974529,0.000035950554],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99891526,0.000097912,0.00029249303,0.00036109422,0.00012755877,0.00020570439],"domain_scores_gemma":[0.99939376,0.000013867893,0.00013346902,0.00034139503,0.000067543944,0.0000499677],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000093155075,0.00014173714,0.00021908041,0.00004638667,0.00004563683,0.000014723838,0.0001002983,0.00011341052,0.0000087765375],"category_scores_gemma":[0.0000504258,0.00015603438,0.00004021412,0.000121371035,0.00006934799,0.000005470369,0.000035101457,0.00006894658,9.889987e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000068835776,0.000047826543,0.048655912,0.000013481339,0.00002162219,0.0000070389333,0.0003330562,0.0016165144,0.94856685,0.0000072614957,0.00003621502,0.0006253636],"study_design_scores_gemma":[0.00085341505,0.00008618997,0.01267368,0.00001564724,0.000016747668,0.0000064326837,0.0001636076,0.0004540876,0.9850337,0.0002069234,0.0003287529,0.00016084543],"about_ca_topic_score_codex":0.00026530257,"about_ca_topic_score_gemma":0.00018085973,"teacher_disagreement_score":0.036466796,"about_ca_system_score_codex":0.000017821574,"about_ca_system_score_gemma":0.00007473109,"threshold_uncertainty_score":0.6362898},"labels":[],"label_agreement":null},{"id":"W1982555305","doi":"10.1016/j.gene.2015.02.055","title":"Genome-wide identification and characterization of teleost-specific microRNAs within zebrafish","year":2015,"lang":"en","type":"article","venue":"Gene","topic":"MicroRNA in disease regulation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":8,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Diabetes Canada; University of Toronto","funders":"Major Research Plan; National Natural Science Foundation of China","keywords":"Biology; Transcriptome; microRNA; Genetics; Zebrafish; Computational biology; Gene; Genome; Phenotype; Gene expression profiling; Gene expression","score_opus":0.012852784088281157,"score_gpt":0.2189792969950514,"score_spread":0.20612651290677023,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1982555305","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9949447,0.00073382264,0.0038841052,0.00006443964,0.0001123959,0.00016945814,0.000039794846,0.000008330764,0.00004298084],"genre_scores_gemma":[0.9976704,0.0001016133,0.00072203914,0.00004546664,0.00012990455,0.000008695133,0.0010909147,0.000015710812,0.00021522061],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9993451,0.000035623732,0.00022421654,0.00021755054,0.00008935235,0.00008816123],"domain_scores_gemma":[0.99936527,0.0000022289676,0.00016459276,0.00024772156,0.00014878174,0.000071418435],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00016873723,0.000081780774,0.00008263859,0.000040624003,0.000025310788,0.000019898995,0.00007890738,0.000078243516,0.000005775788],"category_scores_gemma":[0.000031430514,0.00008838874,0.000024660863,0.000068459325,0.00005006838,0.0000067141527,0.000048845875,0.000022824841,0.000008676179],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000041122003,0.000024727247,0.003228738,0.00001203008,0.000015197786,3.9684582e-7,0.00009122053,0.000011348689,0.996034,0.000010046723,0.000096605865,0.00043452717],"study_design_scores_gemma":[0.00025472918,0.000030327637,0.19645986,0.0000033865806,0.000008401043,0.000005663374,0.000017189202,0.000013714712,0.7965075,0.000036068588,0.0065860725,0.00007707783],"about_ca_topic_score_codex":0.0000023050334,"about_ca_topic_score_gemma":0.000002493598,"teacher_disagreement_score":0.19952653,"about_ca_system_score_codex":0.000013385738,"about_ca_system_score_gemma":0.000042800915,"threshold_uncertainty_score":0.36043882},"labels":[],"label_agreement":null},{"id":"W1982778013","doi":"10.1016/j.gene.2013.10.062","title":"Expression analysis of ATAD3 isoforms in rodent and human cell lines and tissues","year":2013,"lang":"en","type":"article","venue":"Gene","topic":"Protein Degradation and Inhibitors","field":"Biochemistry, Genetics and Molecular Biology","cited_by":46,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Sherbrooke","funders":"","keywords":"Biology; Gene isoform; Alternative splicing; Gene; Molecular biology; Gene expression; RNA splicing; Cell culture; Cell biology; Genetics; RNA","score_opus":0.006614683379752207,"score_gpt":0.24041659350321148,"score_spread":0.23380191012345927,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1982778013","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99829364,0.0013438694,0.00009540599,0.000031491545,0.000010799414,0.000073387244,0.0000041217127,0.0000018815214,0.00014542119],"genre_scores_gemma":[0.99847955,0.00027593918,0.000540071,0.000027548078,0.000030099367,0.0000086364635,0.000074727745,0.0000032630585,0.0005601923],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9996597,0.00001130115,0.000107692504,0.0001230148,0.000038999282,0.00005926179],"domain_scores_gemma":[0.999803,0.0000015944499,0.000038203507,0.0001084963,0.000021555996,0.00002713045],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000042425305,0.00004845374,0.00008423759,0.00006052682,0.000018682429,0.000008938833,0.000034133118,0.000047748203,0.00003595551],"category_scores_gemma":[0.0000065099357,0.000038526796,0.000018248415,0.000064616,0.000024940755,0.0000036273698,0.000059280814,0.000016884584,8.73926e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000026470877,0.000015841879,0.024416715,0.0000070899664,0.000011806025,1.1784965e-7,0.000032961798,0.000007717629,0.9743245,0.0000029726345,0.00026980753,0.00090781495],"study_design_scores_gemma":[0.00015479077,0.000050712275,0.0395772,0.000004218858,0.000014669202,2.1632918e-7,0.000036640693,0.000066019464,0.95896244,0.000017603194,0.0010666919,0.000048768852],"about_ca_topic_score_codex":0.00014783433,"about_ca_topic_score_gemma":0.000060162703,"teacher_disagreement_score":0.015362039,"about_ca_system_score_codex":0.0000015219695,"about_ca_system_score_gemma":0.0000031563495,"threshold_uncertainty_score":0.15710771},"labels":[],"label_agreement":null},{"id":"W1983312260","doi":"10.1016/j.gene.2004.11.001","title":"The genome of the Pseudomonas aeruginosa generalized transducing bacteriophage F116","year":2005,"lang":"en","type":"article","venue":"Gene","topic":"Bacteriophages and microbial interactions","field":"Environmental Science","cited_by":43,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Queen's University","funders":"Hospital for Sick Children; McGill University","keywords":"Biology; Capsid; Temperateness; Lysogenic cycle; Genome; Podoviridae; ORFS; Bacteriophage; Gene; Plasmid; Genetics; Open reading frame; Phagemid; Molecular biology; Peptide sequence; Escherichia coli","score_opus":0.005738998175445319,"score_gpt":0.2029922282610709,"score_spread":0.1972532300856256,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1983312260","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99488527,0.00020275675,0.00017920445,0.0017161048,0.00029394517,0.00017284602,0.000023379502,0.000015969375,0.0025105109],"genre_scores_gemma":[0.99308294,0.00015851691,0.0016642945,0.00041622057,0.00013831987,0.000011562275,0.0000035514418,0.000013099999,0.004511486],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9991854,0.000056020384,0.00022829234,0.00017557388,0.00011794491,0.00023677658],"domain_scores_gemma":[0.99944115,0.000025357798,0.00009003948,0.00039100047,0.0000066676753,0.00004579327],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0001397781,0.000108525135,0.00010313078,0.000009055096,0.00032403524,0.00003540741,0.00037750645,0.00003812835,0.0025010754],"category_scores_gemma":[0.0000066577145,0.000062772524,0.0001345745,0.0001266611,0.00016306217,0.00011805916,0.00012629556,0.00010745126,0.00025250795],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000009911419,0.000023526973,0.00007879113,0.000001290182,0.00001079823,6.610922e-7,0.00036644418,0.0003492279,0.9878547,0.000012249057,0.00035518545,0.010937214],"study_design_scores_gemma":[0.0002645975,0.000015900681,0.09554486,0.0000050457743,0.000021445487,0.000038539034,0.000030546555,0.00006299667,0.5438742,0.000018471375,0.3600105,0.00011287424],"about_ca_topic_score_codex":0.00022202518,"about_ca_topic_score_gemma":0.00048227276,"teacher_disagreement_score":0.4439805,"about_ca_system_score_codex":0.0000811621,"about_ca_system_score_gemma":0.000009462617,"threshold_uncertainty_score":0.99841076},"labels":[],"label_agreement":null},{"id":"W1983722200","doi":"10.1016/j.gene.2012.04.088","title":"Transactivation of the human NME5 gene by Sp1 in pancreatic cancer cells","year":2012,"lang":"en","type":"article","venue":"Gene","topic":"Mechanisms of cancer metastasis","field":"Biochemistry, Genetics and Molecular Biology","cited_by":12,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Public Health Agency of Canada","keywords":"Biology; Transactivation; Transcription factor; Promoter; Pancreatic cancer; Sp1 transcription factor; Gene; Molecular biology; Transcription (linguistics); Cancer cell; Gene expression; Cancer research; Genetics; Cancer","score_opus":0.01184469137142044,"score_gpt":0.2532403378489413,"score_spread":0.24139564647752085,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1983722200","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9950346,0.0023117077,0.0020819302,0.000071312956,0.00014498168,0.00014691478,0.000058733563,0.0000023160762,0.00014751939],"genre_scores_gemma":[0.9984697,0.00024086815,0.00068988034,0.0001500191,0.00011192821,0.000036685648,0.000024653928,0.000014014536,0.0002622355],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9993836,0.000052767406,0.00014999727,0.00012863097,0.000110379,0.00017459274],"domain_scores_gemma":[0.9996018,0.0000034088575,0.00007609533,0.00026030053,0.000022370165,0.00003607033],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014340883,0.000083748375,0.000107169566,0.000016889871,0.000027813127,0.000002891684,0.00014083493,0.00006818,0.000086672],"category_scores_gemma":[0.0000058934756,0.00006719886,0.000052236574,0.000073633506,0.000025643714,0.0000033627214,0.000022705412,0.00004296436,0.000001500238],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000011274603,0.00003865478,0.0014291097,0.000011928471,0.00002286068,4.650993e-8,0.000053640233,0.00004487526,0.9964543,0.000011771482,0.0005079638,0.0014135672],"study_design_scores_gemma":[0.00027616296,0.000027751401,0.0030503578,0.000006975348,0.000023604505,6.2944804e-7,0.000013858122,0.0000029860205,0.992912,0.000027921033,0.0035809865,0.000076792676],"about_ca_topic_score_codex":0.0001317234,"about_ca_topic_score_gemma":0.000043513104,"teacher_disagreement_score":0.0035423331,"about_ca_system_score_codex":0.00002000007,"about_ca_system_score_gemma":0.000028903507,"threshold_uncertainty_score":0.27402902},"labels":[],"label_agreement":null},{"id":"W1983942473","doi":"10.1016/j.gene.2006.02.025","title":"Bovine seminal plasma proteins and their relatives: A new expanding superfamily in mammals","year":2006,"lang":"en","type":"article","venue":"Gene","topic":"Forensic and Genetic Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":64,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Hôpital Maisonneuve-Rosemont","funders":"Canadian Institutes of Health Research","keywords":"Biology; Genetics; Gene; Nonsynonymous substitution; Subfamily; Protein family; Gene duplication; Genome","score_opus":0.010548785351841417,"score_gpt":0.24625743111471637,"score_spread":0.23570864576287495,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1983942473","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9941888,0.0022791165,0.001197379,0.00018339006,0.000026431346,0.00021679621,0.00000983143,0.0000056086724,0.0018926519],"genre_scores_gemma":[0.9915472,0.00019383797,0.0024356395,0.00003177698,0.00024266282,0.000017102459,0.000056518886,0.000014852279,0.0054603615],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99918103,0.000037715643,0.00015175523,0.00028439832,0.00008446161,0.0002606178],"domain_scores_gemma":[0.99969566,0.000010718794,0.000024208124,0.00017870405,0.000021974327,0.00006874122],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001516531,0.00012134646,0.00011767918,0.000050436596,0.000045268316,0.000019624484,0.000086500215,0.00010437162,0.000019857851],"category_scores_gemma":[0.000030799238,0.00009960695,0.00003147295,0.00008526542,0.00009015688,0.000002775399,0.00009723319,0.00008112129,0.000006999091],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001075165,0.000021979578,0.0077755223,0.000009199561,0.000010669467,0.0000072159633,0.00011718344,0.000029383922,0.98401356,0.00007978609,0.0019453467,0.005882615],"study_design_scores_gemma":[0.00096609193,0.0004336581,0.024231525,0.000024477951,0.000003152408,0.00004184667,0.00023475228,0.000122205,0.96569127,0.0007946717,0.0072768894,0.00017946924],"about_ca_topic_score_codex":0.00024101093,"about_ca_topic_score_gemma":0.00018612223,"teacher_disagreement_score":0.01832232,"about_ca_system_score_codex":0.0000104507735,"about_ca_system_score_gemma":0.000078127574,"threshold_uncertainty_score":0.40618536},"labels":[],"label_agreement":null},{"id":"W1983999327","doi":"10.1016/j.gene.2007.11.009","title":"Identification of a granulin-like transcript expressed during anoxic exposure and translated during aerobic recovery in a marine gastropod","year":2007,"lang":"en","type":"article","venue":"Gene","topic":"Marine Biology and Environmental Chemistry","field":"Engineering","cited_by":5,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Carleton University","funders":"","keywords":"Biology; Polysome; Hepatopancreas; Anoxic waters; Biochemistry; Protein biosynthesis; Messenger RNA; Gene; Ribosome; Cell biology; Molecular biology; RNA; Ecology","score_opus":0.0032128265735514084,"score_gpt":0.16430233157010296,"score_spread":0.16108950499655156,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1983999327","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99921155,0.00033095654,0.00013517469,0.000008188108,0.000057906604,0.00009085183,0.000009022712,0.00004959708,0.00010677837],"genre_scores_gemma":[0.99923295,0.00028494705,0.00027980734,0.0000025622123,0.000022146904,0.000008289282,0.00003396573,0.000017139384,0.00011817202],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9992724,0.000008985064,0.0003082604,0.0001639917,0.00005317847,0.00019320255],"domain_scores_gemma":[0.99978554,0.000007602075,0.000024897325,0.00013803074,0.0000027515064,0.000041155432],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000095166935,0.00011800344,0.00014009059,0.00006569884,0.000023954804,0.000004228412,0.00006322692,0.00010360981,0.000087471504],"category_scores_gemma":[0.0000016046802,0.00013572327,0.000033988686,0.00008418582,0.00003362364,0.00006718196,0.000011108131,0.0001123844,0.0000017956164],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00016939535,0.00002655428,0.014607168,0.00019509735,0.000018381143,0.000014415078,0.0001963848,0.0012911907,0.9825604,1.644124e-7,7.672988e-7,0.00092008413],"study_design_scores_gemma":[0.0007215646,0.000012987275,0.23669201,0.000015411264,0.0000082950055,0.000019841136,0.000030362042,0.00005774765,0.762326,0.000016704002,0.000008232111,0.000090815294],"about_ca_topic_score_codex":0.000009172821,"about_ca_topic_score_gemma":0.000050231087,"teacher_disagreement_score":0.22208485,"about_ca_system_score_codex":0.000028377779,"about_ca_system_score_gemma":0.0000017960746,"threshold_uncertainty_score":0.55346346},"labels":[],"label_agreement":null},{"id":"W1984123497","doi":"10.1016/j.gene.2013.09.086","title":"Telomere lengths at birth in trisomies 18 and 21 measured by Q-FISH","year":2013,"lang":"en","type":"article","venue":"Gene","topic":"Telomeres, Telomerase, and Senescence","field":"Medicine","cited_by":18,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Terry Fox Research Institute","funders":"Japan Society for the Promotion of Science; Ministry of Education, Culture, Sports, Science and Technology","keywords":"Telomere; Trisomy; Biology; Ploidy; Chromosome; Aneuploidy; Genetics; Physiology; DNA; Gene","score_opus":0.01782217757425596,"score_gpt":0.23712164322621337,"score_spread":0.2192994656519574,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1984123497","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99228346,0.003722811,0.00000775912,0.0019121062,0.00013507354,0.00043675743,0.0000305264,0.00007654706,0.001394983],"genre_scores_gemma":[0.9868099,0.0014833526,0.00037940237,0.0011494178,0.00012011609,0.000046387275,0.000030777243,0.00003225139,0.009948399],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9985906,0.000050843657,0.00030374175,0.00037279725,0.00028490805,0.0003971384],"domain_scores_gemma":[0.9992412,0.000050823975,0.00006299714,0.00033103555,0.00008028999,0.00023370417],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015976858,0.00020567152,0.00039732232,0.00014566575,0.00008036372,0.000029545965,0.00009410208,0.00011518484,0.000713932],"category_scores_gemma":[0.0001346019,0.00017676265,0.000051459265,0.00025172866,0.00011365755,0.00011794315,0.00006538449,0.00017431808,0.00020389234],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00024494837,0.0002389119,0.16694783,0.00021299365,0.000072945004,0.000086055734,0.0010435851,0.0000011191083,0.6024971,0.000008926718,0.15833448,0.07031109],"study_design_scores_gemma":[0.005023118,0.00037108516,0.6619263,0.00011900874,0.00004814753,0.00020497128,0.0006004613,0.00012096866,0.21732634,0.00010187615,0.11362102,0.0005366651],"about_ca_topic_score_codex":0.00056194316,"about_ca_topic_score_gemma":0.00021420469,"teacher_disagreement_score":0.49497852,"about_ca_system_score_codex":0.00008560993,"about_ca_system_score_gemma":0.000053594184,"threshold_uncertainty_score":0.78170544},"labels":[],"label_agreement":null},{"id":"W1984177006","doi":"10.1016/s0378-1119(01)00720-x","title":"Genomic organization and expression of the human tumorous imaginal disc (TID1) gene","year":2001,"lang":"en","type":"article","venue":"Gene","topic":"Heat shock proteins research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":30,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University; Cancer Care Ontario","funders":"Hospital for Sick Children","keywords":"Biology; Exon; Gene; Genetics; Exon trapping; Zinc finger; Intron; Molecular biology; TATA box; Transcription factor; Gene expression; Promoter; Alternative splicing","score_opus":0.008731502055628648,"score_gpt":0.26019524530794214,"score_spread":0.25146374325231347,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1984177006","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9979819,0.0005006919,0.00093877345,0.000119424694,0.000027346978,0.00016900027,0.000008654501,0.0000047412195,0.00024945676],"genre_scores_gemma":[0.9984945,0.00016062683,0.00046494548,0.000037617865,0.00014002607,0.0000066624402,0.000049116676,0.000018360926,0.0006281203],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9993729,0.000055674533,0.000116390096,0.00019254858,0.000112219,0.00015027482],"domain_scores_gemma":[0.99952143,0.0000023483042,0.000035653302,0.0003160904,0.00007791345,0.000046544566],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000094416355,0.000074844684,0.00007051586,0.000020579046,0.0001146582,0.000012909657,0.00017156778,0.000054071435,0.0000473523],"category_scores_gemma":[0.00004478873,0.000055213768,0.00002105169,0.00009081208,0.000078908226,0.0000023925572,0.0002706317,0.000055069962,0.000004309168],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000009667487,0.000021495585,0.024904104,0.000007032837,0.000004866663,0.000002382454,0.000028951512,0.000012819684,0.97425437,0.000006153881,0.00015639867,0.00059174397],"study_design_scores_gemma":[0.00023287961,0.00005466728,0.03538346,0.00000494668,0.000003951086,0.000060639697,0.000010717038,0.000008070384,0.96242005,0.00003158889,0.0017250284,0.0000639783],"about_ca_topic_score_codex":0.000025037554,"about_ca_topic_score_gemma":0.000007160423,"teacher_disagreement_score":0.0118343085,"about_ca_system_score_codex":0.000012798288,"about_ca_system_score_gemma":0.00004928323,"threshold_uncertainty_score":0.22515522},"labels":[],"label_agreement":null},{"id":"W1984701833","doi":"10.1016/j.gene.2015.04.058","title":"Bichir microRNA repertoire suggests a ray-finned fish affinity of Polypteriforme","year":2015,"lang":"en","type":"article","venue":"Gene","topic":"Fish biology, ecology, and behavior","field":"Environmental Science","cited_by":4,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Major Research Plan; National Natural Science Foundation of China","keywords":"Biology; Actinopterygii; Phylogenetic tree; Teleostei; Fish <Actinopterygii>; Evolutionary biology; Clade; Zoology; Phylogenetics; Genetics; Gene; Fishery","score_opus":0.024645695344194245,"score_gpt":0.24264650410029046,"score_spread":0.2180008087560962,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1984701833","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9949355,0.000036901587,0.000007883335,0.00079349644,0.00033625748,0.00014308252,0.00005085725,0.000037460784,0.0036585736],"genre_scores_gemma":[0.99625707,0.000015468284,0.001969458,0.00072418374,0.000054819382,0.00001347962,0.0000254968,0.00001058132,0.00092943426],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9990048,0.000055559794,0.00023543143,0.00028078145,0.00012188711,0.00030154415],"domain_scores_gemma":[0.9993941,0.00002011029,0.00010783436,0.0003198261,0.00001361146,0.00014448089],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0002729026,0.00012731478,0.00020230866,0.0000272351,0.00006093391,0.0000070136734,0.00027181843,0.00015458948,0.00094438216],"category_scores_gemma":[0.000071943425,0.00010916737,0.00006119685,0.00014120198,0.00030594855,0.00007736472,0.000207145,0.00009445629,0.0003983027],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006431865,0.00018972263,0.29882908,0.0000037927296,0.000008034716,0.000016555305,0.00021305101,0.00001332202,0.67572755,0.0000019707218,0.022104798,0.0028277887],"study_design_scores_gemma":[0.00056031544,0.0003267796,0.89517796,0.0000033114854,0.000016675713,0.000030504485,0.00006825809,0.000014051985,0.09069244,0.00007317009,0.012873635,0.00016292081],"about_ca_topic_score_codex":0.00034812343,"about_ca_topic_score_gemma":0.0013251456,"teacher_disagreement_score":0.5963489,"about_ca_system_score_codex":0.00008655646,"about_ca_system_score_gemma":0.000027548214,"threshold_uncertainty_score":0.9999689},"labels":[],"label_agreement":null},{"id":"W1985198228","doi":"10.1016/j.gene.2014.01.079","title":"Upstream open reading frames and Kozak regions of assembled transcriptome sequences from the spider Cupiennius salei. Selection or chance?","year":2014,"lang":"en","type":"article","venue":"Gene","topic":"Spider Taxonomy and Behavior Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":8,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University","funders":"Canadian Institutes of Health Research; McGill University","keywords":"Biology; Open reading frame; Transcriptome; Computational biology; Sequence (biology); Genetics; Gene; Start codon; Nucleotide; Peptide sequence; Gene expression","score_opus":0.03839747246940875,"score_gpt":0.29340550176130653,"score_spread":0.2550080292918978,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1985198228","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99545914,0.0009581128,0.0023038075,0.00057377154,0.00011387859,0.00021707985,0.000015190632,0.000008843996,0.00035019402],"genre_scores_gemma":[0.9966419,0.00059841934,0.0019945498,0.00022490878,0.00019217716,0.000056963032,0.000021842801,0.000009578263,0.00025968163],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99929005,0.00006445062,0.00015809367,0.00027333997,0.00006231201,0.00015176277],"domain_scores_gemma":[0.9995835,0.00003682843,0.00008752396,0.00020976292,0.000048929764,0.00003344526],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00016388556,0.000119928176,0.00017612935,0.000015663854,0.0001633109,0.00003612308,0.00021352812,0.00008607007,0.000018583958],"category_scores_gemma":[0.00005779695,0.00007700914,0.000043368036,0.00008031833,0.000080237136,0.000008410781,0.00009016914,0.00005902317,0.000001507171],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000081760896,0.00004185152,0.029453075,0.0000062545114,0.00008053573,6.134195e-7,0.00019864019,0.0000046530304,0.96194094,0.00006729365,0.0009965616,0.0071278005],"study_design_scores_gemma":[0.0005422779,0.0004622492,0.030072356,0.000037937134,0.00010223049,0.000016321384,0.00052946893,0.000019638013,0.9401893,0.00025787592,0.027583541,0.00018679787],"about_ca_topic_score_codex":0.0006166088,"about_ca_topic_score_gemma":0.0008628248,"teacher_disagreement_score":0.02658698,"about_ca_system_score_codex":0.000005903237,"about_ca_system_score_gemma":0.000031467192,"threshold_uncertainty_score":0.3140342},"labels":[],"label_agreement":null},{"id":"W1985479360","doi":"10.1016/j.gene.2005.07.036","title":"The mouse sphingomyelin synthase 1 (SMS1) gene is alternatively spliced to yield multiple transcripts and proteins","year":2005,"lang":"en","type":"article","venue":"Gene","topic":"Sphingolipid Metabolism and Signaling","field":"Biochemistry, Genetics and Molecular Biology","cited_by":26,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"Canadian Institutes of Health Research; McGill University Health Centre","keywords":"Biology; Gene; Genetics","score_opus":0.0167177186529841,"score_gpt":0.24190659512652404,"score_spread":0.22518887647353994,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1985479360","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98913604,0.0026922475,0.0061937813,0.0012668292,0.00011319103,0.00044220572,0.00006656686,0.00001941399,0.00006973567],"genre_scores_gemma":[0.98928547,0.00061733683,0.0058589927,0.0019423135,0.0010683689,0.00007996966,0.000019622003,0.00003397965,0.0010939759],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99881727,0.00003490115,0.0002292008,0.00042062666,0.00015528116,0.00034269548],"domain_scores_gemma":[0.99928486,0.000027272052,0.000058154124,0.00038685073,0.00006739932,0.00017543124],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00026383283,0.00019377335,0.00015325702,0.00003408444,0.00024378896,0.000070637245,0.00026006624,0.000100712045,0.000018821185],"category_scores_gemma":[0.00019577995,0.0001525867,0.000079381956,0.00006984833,0.000049996685,0.00000694303,0.00009390639,0.00009500267,0.000017656177],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013037438,0.000031553547,0.0001602362,0.0000049348923,0.000045034794,0.000002118107,0.00038768782,0.00011471762,0.98889625,0.0000123262,0.00078398065,0.009430761],"study_design_scores_gemma":[0.0004796921,0.000076254,0.000294843,0.00000717603,0.000017160011,0.000012170077,0.00005292518,0.0002965581,0.89345026,0.000005810554,0.10511814,0.00018900468],"about_ca_topic_score_codex":0.00012775364,"about_ca_topic_score_gemma":0.00019738691,"teacher_disagreement_score":0.10433416,"about_ca_system_score_codex":0.000009022024,"about_ca_system_score_gemma":0.00003538603,"threshold_uncertainty_score":0.6222305},"labels":[],"label_agreement":null},{"id":"W1985888332","doi":"10.1016/j.gene.2009.06.006","title":"Characterization of mature mitochondrial transcripts in Drosophila, and the implications for the tRNA punctuation model in arthropods","year":2009,"lang":"en","type":"article","venue":"Gene","topic":"RNA and protein synthesis mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":102,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Simon Fraser University","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Biology; Transfer RNA; Genetics; Gene; Mitochondrial DNA; Stop codon; Codon usage bias; Open reading frame; Drosophila melanogaster; Genome; Ribosomal RNA; RNA; Peptide sequence","score_opus":0.013325245138933604,"score_gpt":0.24296453778375038,"score_spread":0.22963929264481678,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1985888332","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8837075,0.0005454197,0.10831682,0.006560596,0.000059556754,0.0007446175,0.000036297435,0.0000020170826,0.000027172022],"genre_scores_gemma":[0.9978707,0.00041442004,0.0011268753,0.0002672734,0.000088296976,0.00011147295,0.00007309066,0.0000049060604,0.000043008687],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.999609,0.000031530417,0.00013676952,0.00011566447,0.00003434885,0.00007268188],"domain_scores_gemma":[0.9997501,0.000012539052,0.00004831277,0.00015629522,0.000023343859,0.000009410762],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000141578,0.000057693596,0.00007754631,0.000018614566,0.000040253984,0.0000088329925,0.00007822384,0.00007704433,9.03854e-7],"category_scores_gemma":[0.00002597945,0.000035432946,0.000034282166,0.000049670653,0.000032191503,0.0000033314498,0.000005777692,0.00002820844,8.968353e-8],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00020615051,0.0000162043,0.000014715454,0.000002812215,0.0000037128063,1.6563876e-8,0.00013494023,0.0001806736,0.9890259,0.0017449291,0.000008453699,0.008661498],"study_design_scores_gemma":[0.0014337137,0.000077540964,0.012679485,0.000008224828,0.000014506837,0.000001872744,0.000015272486,0.0030932643,0.9682562,0.013978055,0.0003731184,0.0000687739],"about_ca_topic_score_codex":0.0000037109626,"about_ca_topic_score_gemma":0.000026765087,"teacher_disagreement_score":0.11416315,"about_ca_system_score_codex":0.0000031481943,"about_ca_system_score_gemma":0.000019050663,"threshold_uncertainty_score":0.14449136},"labels":[],"label_agreement":null},{"id":"W1985932718","doi":"10.1016/j.gene.2013.02.034","title":"Tissue-specific transcriptional modulation of fatty acid-binding protein genes, fabp2, fabp3 and fabp6, by fatty acids and the peroxisome proliferator, clofibrate, in zebrafish (Danio rerio)","year":2013,"lang":"en","type":"article","venue":"Gene","topic":"Peroxisome Proliferator-Activated Receptors","field":"Biochemistry, Genetics and Molecular Biology","cited_by":34,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University","funders":"Natural Sciences and Engineering Research Council of Canada; Dalhousie University","keywords":"Clofibrate; Zebrafish; Biology; Peroxisome proliferator-activated receptor; Peroxisome; Danio; Molecular biology; Gene; Endocrinology; Biochemistry","score_opus":0.007990789244177881,"score_gpt":0.20755531079406617,"score_spread":0.1995645215498883,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1985932718","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9910512,0.0051315,0.0017443369,0.00044315978,0.000096690186,0.0013648291,0.00010098928,0.000020801537,0.00004647211],"genre_scores_gemma":[0.99640703,0.00073154754,0.0017479633,0.00010106121,0.00013664152,0.0003616398,0.00024640144,0.000047691694,0.00022004849],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99805653,0.00021518659,0.0004872998,0.0006058212,0.00025347844,0.00038166926],"domain_scores_gemma":[0.99923456,0.000012808825,0.00015925242,0.00033786034,0.00012566456,0.00012985572],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00031420615,0.00032562166,0.0003589455,0.00009666657,0.00015403377,0.00009849622,0.00020990464,0.00033294773,0.00006112288],"category_scores_gemma":[0.00003279689,0.00026237607,0.00006226122,0.00021333536,0.00033356072,0.000053037027,0.000112218346,0.00020420348,0.0000064575634],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00020714331,0.000063361746,0.005479549,0.000045957815,0.000049102313,6.727101e-7,0.00016974285,0.000013056376,0.9906111,0.00008984379,0.0002411682,0.0030293071],"study_design_scores_gemma":[0.0021854308,0.00017010068,0.005354709,0.000024022778,0.00000840107,0.000015332653,0.00012366388,0.00013186675,0.9887901,0.00012495286,0.0027773199,0.00029411996],"about_ca_topic_score_codex":0.00003927153,"about_ca_topic_score_gemma":0.000010365106,"teacher_disagreement_score":0.0053557837,"about_ca_system_score_codex":0.00003763357,"about_ca_system_score_gemma":0.00006056367,"threshold_uncertainty_score":0.99998283},"labels":[],"label_agreement":null},{"id":"W1986128852","doi":"10.1016/j.gene.2006.04.024","title":"Large-scale analyses of synonymous substitution rates can be sensitive to assumptions about the process of mutation","year":2006,"lang":"en","type":"article","venue":"Gene","topic":"Genomics and Phylogenetic Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":22,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University; University of Ottawa","funders":"Natural Sciences and Engineering Research Council of Canada; Genome Atlantic; Genome Canada","keywords":"Codon usage bias; Synonymous substitution; Biology; Genetics; Selection (genetic algorithm); Molecular evolution; Silent mutation; Mutation; Constraint (computer-aided design); Substitution (logic); Amino acid substitution; Genome; Relevance (law); Mutation rate; Evolutionary biology; Gene; Computer science; Mathematics","score_opus":0.016922589280813086,"score_gpt":0.298184380442869,"score_spread":0.2812617911620559,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1986128852","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99558824,0.000615449,0.0030684592,0.0001284573,0.000041940584,0.00014488283,0.00020299478,0.0000014234727,0.00020817781],"genre_scores_gemma":[0.9991179,0.000054770317,0.0004640736,0.000066698165,0.0000778814,0.000015188223,0.00011773673,0.0000058568094,0.00007986317],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99948955,0.000028579438,0.00016168627,0.0001388305,0.00007317717,0.000108205626],"domain_scores_gemma":[0.9995301,0.000009511591,0.00008717642,0.00014221178,0.00021347929,0.000017565846],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009395546,0.00007386331,0.00010624701,0.000027330652,0.00007560172,0.0000045721745,0.00006286713,0.000040413444,0.0000023488992],"category_scores_gemma":[0.000020560541,0.00005720058,0.000050872874,0.000100763646,0.00006188156,4.263097e-7,0.00003057434,0.000019140178,6.399125e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000021461565,0.000037563397,0.0016844511,0.000009607526,0.000051575786,4.2911418e-7,0.00032628223,0.007879091,0.9897505,0.000044115168,0.00010218378,0.00009273931],"study_design_scores_gemma":[0.00013832464,0.000069992966,0.061440386,0.00000433823,0.00004820067,0.0000035438745,0.00044169262,0.0000806677,0.93737394,0.00006586693,0.00027079848,0.000062258354],"about_ca_topic_score_codex":0.0002036524,"about_ca_topic_score_gemma":0.0010530684,"teacher_disagreement_score":0.059755936,"about_ca_system_score_codex":0.000005571925,"about_ca_system_score_gemma":0.00004044899,"threshold_uncertainty_score":0.23325719},"labels":[],"label_agreement":null},{"id":"W1986587649","doi":"10.1016/j.gene.2008.10.005","title":"“Functional mapping of the promoter region of the GNB2L1 human gene coding for RACK1 scaffold protein”","year":2008,"lang":"en","type":"article","venue":"Gene","topic":"Protein Kinase Regulation and GTPase Signaling","field":"Biochemistry, Genetics and Molecular Biology","cited_by":35,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"","keywords":"Biology; Molecular biology; Luciferase; Signal transduction; Scaffold protein; Cell biology; Gene expression; Transcription (linguistics); Protein kinase C; Gene; Transfection; Genetics","score_opus":0.035640886356197755,"score_gpt":0.23506104813893317,"score_spread":0.19942016178273542,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1986587649","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98683494,0.0002636471,0.01177221,0.00025459475,0.00007914184,0.0006953016,0.00001169839,0.000004750616,0.00008372809],"genre_scores_gemma":[0.99758154,0.0000073879037,0.0011230782,0.00008247475,0.00020385356,0.000057553836,0.000026559814,0.000012772831,0.00090478995],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9993029,0.000046865163,0.00021521491,0.00017176307,0.00014044733,0.00012277445],"domain_scores_gemma":[0.9993283,0.000004098543,0.00019638221,0.00032635152,0.00012412349,0.00002072797],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014369907,0.00008873749,0.00010136302,0.000021541782,0.00021972673,0.0000035485089,0.0001550207,0.000084409505,0.00000809436],"category_scores_gemma":[0.000040618797,0.000058464877,0.00016587337,0.000089404784,0.00011393683,0.0000026890418,0.00009534641,0.00003904955,3.8603292e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000022792172,0.000026371365,0.00061280467,0.000037669535,0.000026341258,4.03509e-7,0.00003842273,0.00011581758,0.9984123,0.00019927263,0.00029802675,0.00020974873],"study_design_scores_gemma":[0.0004424897,0.000046035973,0.0042937677,0.000047056445,0.000009934371,0.000037259528,0.000009699023,0.00007460144,0.99266213,0.00019673869,0.0021072777,0.0000729927],"about_ca_topic_score_codex":0.0000069688676,"about_ca_topic_score_gemma":0.0000028086408,"teacher_disagreement_score":0.010746601,"about_ca_system_score_codex":0.000010390692,"about_ca_system_score_gemma":0.000068033216,"threshold_uncertainty_score":0.23841284},"labels":[],"label_agreement":null},{"id":"W1986731810","doi":"10.1016/s0378-1119(02)00472-9","title":"Nucleotide sequence of the p53 cDNA of beluga whale (Delphinapterus leucas)","year":2002,"lang":"en","type":"article","venue":"Gene","topic":"Cancer-related Molecular Pathways","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université du Québec à Montréal","funders":"","keywords":"Biology; Complementary DNA; Exon; Beluga Whale; Rapid amplification of cDNA ends; Open reading frame; Whale; Gene; Genetics; Nucleic acid sequence; Leucas; Molecular biology; cDNA library; Peptide sequence; Molecular cloning; Fishery; Ecology","score_opus":0.04325534981147838,"score_gpt":0.24798136859709397,"score_spread":0.20472601878561558,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1986731810","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9895282,0.002573568,0.00016867036,0.0009817429,0.00025690589,0.00027608388,0.00003697525,0.000025016785,0.006152829],"genre_scores_gemma":[0.9978351,0.0002510674,0.00076383486,0.00028093593,0.00006545349,0.0000054892375,0.000003911433,0.000022561355,0.0007716578],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99906945,0.000029233479,0.00026499815,0.00017382036,0.00028797856,0.0001745094],"domain_scores_gemma":[0.9990685,0.000016928892,0.0001381639,0.0006202218,0.00009126793,0.000064930966],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000099041215,0.0001033002,0.00023368461,0.000048955462,0.00003140526,0.0000026118362,0.00015958387,0.00007318534,0.00043769128],"category_scores_gemma":[0.00007827764,0.00007918602,0.00013714227,0.00023212748,0.00012803622,0.000028070832,0.00006657593,0.00015095771,0.000043211276],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000024778601,0.00008264082,0.00060592,0.00006394787,0.000053654443,0.00003608004,0.00056057924,0.00010201589,0.9902731,0.00011293736,0.0013637567,0.006720588],"study_design_scores_gemma":[0.0010221949,0.00020053798,0.0032339997,0.00020248105,0.00012404105,0.00016635744,0.000064475,0.0005765005,0.98767376,0.000083333565,0.0065500536,0.0001022508],"about_ca_topic_score_codex":0.00014377212,"about_ca_topic_score_gemma":0.000026881075,"teacher_disagreement_score":0.0083068805,"about_ca_system_score_codex":0.000060682643,"about_ca_system_score_gemma":0.000050760256,"threshold_uncertainty_score":0.47924128},"labels":[],"label_agreement":null},{"id":"W1987139753","doi":"10.1016/j.gene.2013.04.033","title":"De novo trisomy 20p characterized by array comparative genomic hybridization: Report of a novel case and review of the literature","year":2013,"lang":"en","type":"review","venue":"Gene","topic":"Genomic variations and chromosomal abnormalities","field":"Biochemistry, Genetics and Molecular Biology","cited_by":49,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Children's & Women's Health Centre of British Columbia","funders":"","keywords":"Biology; Gene duplication; Trisomy; Comparative genomic hybridization; Chromosome 20; Karyotype; Monosomy; Anatomy; Cyst; Chromosome; Genetics; Pathology; Medicine; Gene","score_opus":0.02498537772309888,"score_gpt":0.28348233899843,"score_spread":0.2584969612753311,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1987139753","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0054539186,0.9920031,0.00035150372,0.000022006332,0.00007107865,0.00089998427,0.0010926496,0.0000021732924,0.00010358182],"genre_scores_gemma":[0.0005475292,0.99556196,0.0009975843,0.0000758714,0.0001440029,0.00014956876,0.0014440513,0.00001922536,0.0010602027],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9987087,0.000117270254,0.0006983775,0.00027124918,0.00007331054,0.00013109604],"domain_scores_gemma":[0.99842125,0.000013268251,0.00087076775,0.0004705776,0.0001787298,0.000045413963],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00019771996,0.00023883393,0.00085545,0.00002576307,0.000051986648,0.000019577983,0.0001721849,0.00017300106,0.000031222287],"category_scores_gemma":[0.000027150425,0.0001625137,0.00025004326,0.0001208873,0.00007193918,0.0000037992618,0.0001000327,0.0001066243,9.367489e-7],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00004473248,0.0006196296,0.000062364255,0.28464422,0.0026746793,0.0002390817,0.00094227423,0.0000030420115,0.60829604,0.000114695766,0.011183686,0.091175586],"study_design_scores_gemma":[0.00022931394,0.000040352792,0.000002945952,0.007184586,0.00037831697,0.011955284,0.000014909156,3.4223834e-7,0.0106668165,0.0000016352046,0.9693395,0.00018600277],"about_ca_topic_score_codex":0.000010993757,"about_ca_topic_score_gemma":0.0000010219833,"teacher_disagreement_score":0.9581558,"about_ca_system_score_codex":0.000020514979,"about_ca_system_score_gemma":0.0003062948,"threshold_uncertainty_score":0.6627116},"labels":[],"label_agreement":null},{"id":"W1987197959","doi":"10.1016/j.gene.2012.01.039","title":"CUX1 transcription factors: From biochemical activities and cell-based assays to mouse models and human diseases","year":2012,"lang":"en","type":"review","venue":"Gene","topic":"Genetic and Kidney Cyst Diseases","field":"Biochemistry, Genetics and Molecular Biology","cited_by":79,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"Canadian Institutes of Health Research","keywords":"Biology; Transcription factor; Cell biology; Cell cycle; Gene knockdown; Neurodegeneration; Cell growth; Cell; Gene; Genetics; Internal medicine","score_opus":0.03628456872553492,"score_gpt":0.2786563638320568,"score_spread":0.24237179510652185,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1987197959","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.19478822,0.80222803,0.00049576676,0.000006887654,0.000058580375,0.00035998388,0.0020208198,0.000018070852,0.000023603316],"genre_scores_gemma":[0.2679289,0.7269676,0.0003236842,0.000082165905,0.0003451581,0.000102294915,0.0040158876,0.00007006002,0.00016428728],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9986067,0.000097029966,0.00025647608,0.0005941135,0.0001389283,0.00030676473],"domain_scores_gemma":[0.9989684,0.00002016308,0.00009364323,0.00038623693,0.000022513434,0.0005089925],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.000039634426,0.0004501765,0.0006293306,0.000069628244,0.00010448982,0.000055268167,0.00015326042,0.00035726008,0.000022962637],"category_scores_gemma":[0.000010804611,0.00039131692,0.000223447,0.00004361284,0.000090346686,0.00000597391,0.0000971166,0.00010074327,0.0000025718837],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009017384,0.0005907247,0.00020157773,0.007550271,0.00043659084,0.000004549971,0.00026841447,0.000021469428,0.9506118,0.0000058685723,0.0034957698,0.036722735],"study_design_scores_gemma":[0.0011587735,0.00042854936,0.00018954524,0.0011099441,0.0041630124,0.000006297737,0.000187582,0.000014620637,0.27512306,0.00010319951,0.71544176,0.002073657],"about_ca_topic_score_codex":0.000052680996,"about_ca_topic_score_gemma":0.0000045443585,"teacher_disagreement_score":0.711946,"about_ca_system_score_codex":0.00001738928,"about_ca_system_score_gemma":0.00011306649,"threshold_uncertainty_score":0.99985385},"labels":[],"label_agreement":null},{"id":"W1988225027","doi":"10.1016/j.gene.2004.03.010","title":"Identification of a conserved cluster of skin-specific genes encoding secreted proteins","year":2004,"lang":"en","type":"article","venue":"Gene","topic":"Skin and Cellular Biology Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":41,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Collège de Maisonneuve","funders":"","keywords":"Biology; Complementary DNA; Signal peptide; Gene isoform; cDNA library; Molecular biology; Gene; Secretory protein; Exon; Peptide sequence; Genetics","score_opus":0.018391997158287234,"score_gpt":0.26294360665075334,"score_spread":0.2445516094924661,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1988225027","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9913241,0.0020815108,0.0060110735,0.000077334254,0.00006209811,0.00026401423,0.000019712084,0.0000044799817,0.00015564112],"genre_scores_gemma":[0.99824923,0.00052128814,0.00076978136,0.000017272108,0.00007667748,0.000024101346,0.00012676054,0.0000108348095,0.00020406446],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9991886,0.000062581654,0.0002722312,0.00022036939,0.00010659841,0.00014964034],"domain_scores_gemma":[0.9993673,0.0000058172986,0.00012102124,0.00032879683,0.00014126206,0.00003579998],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002626134,0.00008153721,0.00012285607,0.000049657894,0.00003426066,0.000005400164,0.00017262482,0.00013377164,0.00002026624],"category_scores_gemma":[0.000032642107,0.00007645613,0.000079788355,0.00009957025,0.00014554054,0.00000169819,0.00007890419,0.00004487665,0.000007309501],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000903592,0.00004891544,0.0006274086,0.00002671412,0.000038778984,0.000001990896,0.000051225947,0.000064069725,0.9981965,0.000099445104,0.000031843043,0.000722773],"study_design_scores_gemma":[0.00064762984,0.00014285462,0.0011652065,0.000010155855,0.0000060484404,0.000022107057,0.000045056313,0.00001375567,0.996907,0.00012837366,0.00083477405,0.000077044075],"about_ca_topic_score_codex":0.000016667836,"about_ca_topic_score_gemma":0.00000798411,"teacher_disagreement_score":0.0069250837,"about_ca_system_score_codex":0.000008642785,"about_ca_system_score_gemma":0.00007257172,"threshold_uncertainty_score":0.31177905},"labels":[],"label_agreement":null},{"id":"W1988394819","doi":"10.1016/j.gene.2007.10.030","title":"Sex versus parthenogenesis: A transcriptomic approach of photoperiod response in the model aphid Acyrthosiphon pisum (Hemiptera: Aphididae)","year":2007,"lang":"en","type":"article","venue":"Gene","topic":"Insect-Plant Interactions and Control","field":"Agricultural and Biological Sciences","cited_by":43,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Ministerio de Economía y Competitividad; Agence Nationale de la Recherche; Mountain Equipment Co-operative","keywords":"Acyrthosiphon pisum; Biology; Aphididae; Aphid; Suppression subtractive hybridization; Genetics; Parthenogenesis; photoperiodism; Gene; cDNA library; Expressed sequence tag; Hemiptera; Complementary DNA; Botany; PEST analysis; Embryo; Homoptera","score_opus":0.026319575231483573,"score_gpt":0.22931709824545043,"score_spread":0.20299752301396687,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1988394819","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9975332,0.00027274396,0.00015875844,0.0002505743,0.00009839828,0.00025918393,0.000053797456,0.00001979992,0.0013535132],"genre_scores_gemma":[0.9992511,0.000044351153,0.0001684906,0.00024106818,0.000092961025,0.000044574997,0.000025913761,0.0000013453534,0.00013017387],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9989067,0.00012882122,0.00027174648,0.00022415884,0.00018044701,0.00028814847],"domain_scores_gemma":[0.9995371,0.00022578663,0.00006578981,0.00010105565,0.000030775947,0.00003948685],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00084337604,0.00013394793,0.00017936593,0.000028738448,0.00011649063,0.000027683385,0.00030099126,0.00008461125,0.00005628431],"category_scores_gemma":[0.0000160986,0.000048706148,0.0001227812,0.00026952708,0.00003797485,0.000063022744,0.000015005335,0.00012093335,0.000008141334],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.004530896,0.00018039596,0.00026233317,0.0000032772132,0.000016153668,0.0000063421166,0.0012435889,0.00015131448,0.985866,0.00004607558,0.0000656262,0.007627989],"study_design_scores_gemma":[0.0042503765,0.001991623,0.060255557,0.000053832362,0.000115090894,0.00015222654,0.012384312,0.020389413,0.88281524,0.00019992817,0.01641588,0.0009765],"about_ca_topic_score_codex":0.0003382812,"about_ca_topic_score_gemma":0.0006308195,"teacher_disagreement_score":0.103050746,"about_ca_system_score_codex":0.000022890268,"about_ca_system_score_gemma":0.000014026346,"threshold_uncertainty_score":0.1986179},"labels":[],"label_agreement":null},{"id":"W1989157749","doi":"10.1016/j.gene.2007.03.004","title":"Molecular characterization and phylogenetic position of a new mariner-like element in the coastal crab, Pachygrapsus marmoratus","year":2007,"lang":"en","type":"article","venue":"Gene","topic":"Genomics and Phylogenetic Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":19,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Conseil Régional des Pays de la Loire; Agence Universitaire de la Francophonie","keywords":"Biology; Subfamily; Phylogenetic tree; Transposable element; Genome; Open reading frame; Phylogenetics; Phylum; Evolutionary biology; Lineage (genetic); Mitochondrial DNA; Genetics; Zoology; Transposase; Gene","score_opus":0.006483101873062292,"score_gpt":0.21701319461307442,"score_spread":0.21053009274001214,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1989157749","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99402577,0.0010941998,0.004290718,0.00015084729,0.000065200904,0.00021366654,0.000027270033,0.0000010725867,0.0001312597],"genre_scores_gemma":[0.9981644,0.0004797695,0.0006703397,0.00034967612,0.00008659575,0.000007771432,0.00017144751,0.000010357879,0.000059639548],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9993029,0.000034073848,0.0001962831,0.00019331438,0.00009578741,0.00017762215],"domain_scores_gemma":[0.99966204,0.0000055704986,0.00007263123,0.00018405345,0.000037278514,0.000038426606],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00021303735,0.00010985312,0.00010094522,0.000041427727,0.000032613272,0.000010727978,0.00008968694,0.000058883666,0.0000024229312],"category_scores_gemma":[0.0000073666624,0.000092746624,0.000035595993,0.00009062857,0.000039920367,5.289149e-7,0.000083006285,0.000036228885,4.7239135e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000061314226,0.000036700712,0.013960628,0.000008429567,0.000027556269,0.0000058643063,0.0001319998,0.00001927179,0.97374016,0.000048355236,0.00002735173,0.011932357],"study_design_scores_gemma":[0.0005654439,0.0002948136,0.40941828,0.0000042286833,0.000022141365,0.000022490021,0.0001028024,0.00001963596,0.5858667,0.000098105935,0.0034695908,0.0001158091],"about_ca_topic_score_codex":0.00005478507,"about_ca_topic_score_gemma":0.00016272167,"teacher_disagreement_score":0.39545766,"about_ca_system_score_codex":0.0000037804691,"about_ca_system_score_gemma":0.000027007472,"threshold_uncertainty_score":0.37820977},"labels":[],"label_agreement":null},{"id":"W1989743830","doi":"10.1016/j.gene.2014.06.036","title":"Global analysis of population structure, spatial and temporal dynamics of genetic diversity, and evolutionary lineages of Iris yellow spot virus (Tospovirus: Bunyaviridae)","year":2014,"lang":"en","type":"article","venue":"Gene","topic":"Plant Virus Research Studies","field":"Agricultural and Biological Sciences","cited_by":14,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"Higher Education Commission, Pakistan","keywords":"Biology; Genetics; Population; Genetic diversity; Genotype; Gene flow; Tospovirus; Genetic variation; GenBank; Evolutionary biology; Gene; Virus; Plant virus","score_opus":0.016059035203942452,"score_gpt":0.23532000557611654,"score_spread":0.2192609703721741,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1989743830","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9964533,0.0004295934,0.000049490227,0.00003713114,0.000017927116,0.000078233934,0.0029166767,0.00000559327,0.00001205584],"genre_scores_gemma":[0.99890584,0.00028147618,0.0004369171,0.000006443525,0.000031128082,4.1548716e-7,0.00033093657,3.5762474e-7,0.0000064898986],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9992009,0.00006442774,0.00020216903,0.00016762516,0.0002526607,0.00011222472],"domain_scores_gemma":[0.9995995,0.00008239,0.00014790187,0.000045944795,0.000078632766,0.00004559733],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00010398719,0.00008422945,0.00027595757,0.000029679066,0.00013325864,0.000004608711,0.00010903722,0.00005888772,0.000026980659],"category_scores_gemma":[0.000046482714,0.000040180916,0.00005628151,0.00037781507,0.00016232458,0.000039282506,0.0004208144,0.000029864417,1.3525963e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000054351814,0.000028098704,0.91479784,0.000014634351,0.00015529805,5.682814e-7,0.000025897323,0.00022400235,0.07349037,0.000012847246,0.000021823069,0.0111742485],"study_design_scores_gemma":[0.0000929451,0.0001497723,0.98912126,0.000004997998,0.00017199448,8.902657e-7,0.000027856939,0.008368983,0.0015892909,0.00038593356,0.000021063111,0.00006500876],"about_ca_topic_score_codex":0.017685955,"about_ca_topic_score_gemma":0.020196835,"teacher_disagreement_score":0.0743234,"about_ca_system_score_codex":0.000016873122,"about_ca_system_score_gemma":0.0000030692313,"threshold_uncertainty_score":0.99768203},"labels":[],"label_agreement":null},{"id":"W1990804635","doi":"10.1016/j.gene.2004.11.008","title":"Biochemical characterization of the mammalian Cux2 protein","year":2004,"lang":"en","type":"article","venue":"Gene","topic":"RNA Research and Splicing","field":"Biochemistry, Genetics and Molecular Biology","cited_by":47,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University Health Centre; McGill University","funders":"","keywords":"Biology; Repressor; Homeobox; Gene; YY1; DNA; Gene isoform; DNA-binding protein; Genetics; Activator (genetics); Transcription factor; Molecular biology; Nuclear protein; Cell biology; Gene expression; Promoter","score_opus":0.007426637598141286,"score_gpt":0.23175266816882023,"score_spread":0.22432603057067896,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1990804635","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99845713,0.000041317715,0.0008212604,0.00038879184,0.000024062678,0.00014544293,0.00000918036,0.000002488238,0.0001103171],"genre_scores_gemma":[0.99843323,0.000010046907,0.00029994457,0.00007065016,0.000088355926,0.000011148861,0.000047964437,0.000006181439,0.0010324727],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9996144,0.000014409493,0.00007730577,0.00010240283,0.000083474035,0.000107996326],"domain_scores_gemma":[0.9997118,4.4279827e-7,0.000030540934,0.0001938348,0.000032373442,0.00003099099],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00005412332,0.000043448203,0.00004169556,0.000009114083,0.000029576124,0.000004999217,0.00012391189,0.000050573628,0.0000069142648],"category_scores_gemma":[0.000028741595,0.00003094034,0.000038726193,0.00005612696,0.000039676725,9.940134e-7,0.0000644317,0.00003450581,0.0000044347494],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000018925024,0.000016878805,0.00027056932,0.000006963604,0.000005285866,3.5427195e-7,0.00000635181,0.0000039677043,0.9992536,0.00004982659,0.000021819995,0.00034547952],"study_design_scores_gemma":[0.00022178308,0.00004957081,0.0044359574,0.000008060717,0.0000014866757,0.000003059827,0.0000028213392,0.0000029423998,0.99397475,0.00003232188,0.0012298208,0.000037409787],"about_ca_topic_score_codex":0.000013033021,"about_ca_topic_score_gemma":0.0000026135529,"teacher_disagreement_score":0.005278812,"about_ca_system_score_codex":0.0000064825217,"about_ca_system_score_gemma":0.000049467304,"threshold_uncertainty_score":0.12617104},"labels":[],"label_agreement":null},{"id":"W1990947166","doi":"10.1016/j.gene.2014.08.055","title":"Identification of a new non-coding exon and haplotype variability in the cattle DEFB103 gene","year":2014,"lang":"en","type":"article","venue":"Gene","topic":"RNA regulation and disease","field":"Biochemistry, Genetics and Molecular Biology","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"Canadian Institutes of Health Research; Health Canada; Ministry of Agriculture - Saskatchewan","keywords":"Biology; Exon; Genetics; Haplotype; Gene; Identification (biology); Coding region; Computational biology; Allele","score_opus":0.010020593853780417,"score_gpt":0.24459912086121427,"score_spread":0.23457852700743384,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1990947166","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9770653,0.000102027414,0.02225601,0.00015445432,0.00003704336,0.000089477195,0.0000040143054,0.0000020851794,0.00028957674],"genre_scores_gemma":[0.9992886,0.000025974876,0.00033553276,0.00010878545,0.00007051686,0.0000048503352,0.00003254877,0.000003954737,0.00012923387],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99956524,0.00006238896,0.00012321165,0.00013348387,0.000054257263,0.00006139278],"domain_scores_gemma":[0.9996548,0.000011296409,0.00004613316,0.0002328624,0.000022969585,0.000031900894],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000404166,0.000043801698,0.000051029852,0.000015182134,0.00002160859,0.000009929016,0.00006985173,0.000040576662,0.0000057488555],"category_scores_gemma":[0.00012064094,0.00003526037,0.000020535825,0.000047730817,0.00002556326,0.0000020170935,0.000023123033,0.000017159144,0.0000021001727],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000023032515,0.00002628081,0.010053416,0.000010046073,0.0000037936197,8.4666006e-8,0.000085998174,0.000073826144,0.9851416,0.0001077196,0.00025641714,0.004217802],"study_design_scores_gemma":[0.00036448028,0.000031759544,0.40757412,0.0000023879002,0.000011407374,0.000002601755,0.000022625241,0.0009559082,0.5895754,0.0005866555,0.0008098415,0.00006281326],"about_ca_topic_score_codex":0.000030103924,"about_ca_topic_score_gemma":0.000016046843,"teacher_disagreement_score":0.39752072,"about_ca_system_score_codex":0.0000033627546,"about_ca_system_score_gemma":0.000027496337,"threshold_uncertainty_score":0.14378762},"labels":[],"label_agreement":null},{"id":"W1991145548","doi":"10.1016/s0378-1119(01)00615-1","title":"A mutation in the largest (catalytic) subunit of RNA polymerase II and its relation to the arrest of the cell cycle in G1 phase","year":2001,"lang":"en","type":"article","venue":"Gene","topic":"RNA and protein synthesis mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":16,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Institute of Genetics; Wellcome Trust","keywords":"Biology; Mutant; RNA polymerase II; Molecular biology; Cell cycle; Transcription (linguistics); Gene; Mutation; Genetics; Cytoplasm; Protein subunit; Polymerase; RNA; RNA polymerase; Gene expression","score_opus":0.010538202285444574,"score_gpt":0.2428424541907019,"score_spread":0.23230425190525733,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1991145548","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9976288,0.0008317754,0.0001517041,0.0007139174,0.000041148247,0.0002737272,0.000015239857,8.6897404e-7,0.00034280214],"genre_scores_gemma":[0.99955535,0.000097552984,0.000045851575,0.0001359424,0.00003205681,0.000018952467,0.00001598935,0.0000053740364,0.00009290333],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.999489,0.00009818462,0.00014317186,0.00010403743,0.0000800365,0.00008554226],"domain_scores_gemma":[0.9996689,0.000018881168,0.00006878695,0.00020979332,0.00001917162,0.000014444943],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003046253,0.000056587523,0.000060687442,0.000024721836,0.00004670712,0.0000043744767,0.0001409831,0.000050385224,0.000008984772],"category_scores_gemma":[0.000059811846,0.00003303514,0.000023453526,0.00014354386,0.000016869919,0.0000030189171,0.00004554142,0.00003968395,0.000001243812],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000055855107,0.000083595696,0.00025677972,0.0000055273904,0.000003153268,0.0000014978773,0.000474417,0.00021403372,0.99442875,0.000042825195,0.000011825081,0.0044217417],"study_design_scores_gemma":[0.0004544894,0.00011701291,0.0052702925,0.000007814397,0.000007674348,0.000004295236,0.00013569483,0.0001645851,0.9932585,0.000091195405,0.0004464458,0.00004199586],"about_ca_topic_score_codex":0.00009527245,"about_ca_topic_score_gemma":0.00017888485,"teacher_disagreement_score":0.005013513,"about_ca_system_score_codex":0.0000035190683,"about_ca_system_score_gemma":0.000020194882,"threshold_uncertainty_score":0.13471338},"labels":[],"label_agreement":null},{"id":"W1991516215","doi":"10.1016/j.gene.2012.06.079","title":"Association of SNP41, SNP56 and a novel SNP in PDE4D gene with stroke and its subtypes","year":2012,"lang":"en","type":"article","venue":"Gene","topic":"Phosphodiesterase function and regulation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":22,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Institute of Genetics; Indian Council of Medical Research","keywords":"SNP; Single-nucleotide polymorphism; Biology; Stroke (engine); Lacunar stroke; Genotype; Internal medicine; Ischemic stroke; Pathogenesis; Population; Gene; Genetics; Bioinformatics; Medicine; Immunology; Ischemia","score_opus":0.009181453158820324,"score_gpt":0.21691851320345643,"score_spread":0.2077370600446361,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1991516215","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9975266,0.0016527324,0.00041881486,0.00008460219,0.000061306666,0.00007301022,0.000019168014,0.0000027673912,0.00016101502],"genre_scores_gemma":[0.99758905,0.00017175019,0.00044877524,0.00005802746,0.00007865649,0.0000048110314,0.000043289787,0.0000060834304,0.0015995516],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99962276,0.000014578741,0.00008662922,0.000103070444,0.000064267006,0.00010871958],"domain_scores_gemma":[0.9997923,0.0000058825044,0.00006443628,0.00006128113,0.000038527207,0.000037620648],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012674312,0.000060383292,0.00007554272,0.000026186997,0.000020305897,0.000005027085,0.000017135377,0.00008100438,0.00000661299],"category_scores_gemma":[0.000019702878,0.000050881245,0.000010719707,0.00003625777,0.000013292424,0.0000060296425,0.000023691893,0.000026468577,8.443513e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006286197,0.000033764823,0.12356224,0.000009171501,0.00002653218,1.0681974e-7,0.00006449647,0.00001720033,0.87575597,0.000017838158,0.00009995227,0.00034989615],"study_design_scores_gemma":[0.0006622681,0.00008429737,0.26000452,0.0000049380815,0.000014392615,0.0000075793946,0.000021317317,0.000062258056,0.73640835,0.0000027109643,0.002660813,0.000066551416],"about_ca_topic_score_codex":0.000010680758,"about_ca_topic_score_gemma":0.000054238302,"teacher_disagreement_score":0.13934758,"about_ca_system_score_codex":0.000010419318,"about_ca_system_score_gemma":0.000013431751,"threshold_uncertainty_score":0.20748769},"labels":[],"label_agreement":null},{"id":"W1991764329","doi":"10.1016/j.gene.2014.10.016","title":"The long N-terminus of the C. elegans DNA repair enzyme APN-1 targets the protein to the nucleus of a heterologous system","year":2014,"lang":"en","type":"article","venue":"Gene","topic":"DNA Repair Mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Hôpital Maisonneuve-Rosemont","funders":"Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research","keywords":"Biology; AP site; Mutant; Molecular biology; DNA repair; Saccharomyces cerevisiae; Complementary DNA; DNA; Biochemistry; Gene","score_opus":0.004444215570471178,"score_gpt":0.19650941084759618,"score_spread":0.192065195277125,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1991764329","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99569464,0.00051989435,0.0011868267,0.0007433717,0.00029863438,0.0010139964,0.000032368465,0.00002794394,0.00048233272],"genre_scores_gemma":[0.9981803,0.00000753583,0.0002836623,0.00033169976,0.00021598053,0.00014107871,0.000004594805,0.00002804945,0.00080705725],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99847645,0.0003780213,0.00032128577,0.00028633507,0.0002395551,0.00029833155],"domain_scores_gemma":[0.99803585,0.00003707176,0.00021877699,0.0015610431,0.00010231096,0.000044951932],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009076278,0.00016513858,0.00017167095,0.000012520473,0.0002292392,0.000018150778,0.0009473545,0.0001161385,0.0000024059302],"category_scores_gemma":[0.00016641806,0.00007073006,0.00023689045,0.000100149424,0.0001471564,0.0000019480442,0.00040596852,0.00010158476,0.000009281353],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007441845,0.000026158223,0.00007562925,0.00003639895,0.00008190668,0.0000025894349,0.00018320345,0.0000985238,0.9963322,0.00034758422,0.0009146782,0.0018266619],"study_design_scores_gemma":[0.00017571588,0.0003398627,0.0007095584,0.000026669655,0.000031618038,0.000050884864,0.00010971502,0.00028655463,0.97903717,0.000040378312,0.019101452,0.0000904435],"about_ca_topic_score_codex":0.00004085589,"about_ca_topic_score_gemma":0.00013086201,"teacher_disagreement_score":0.018186774,"about_ca_system_score_codex":0.000015704161,"about_ca_system_score_gemma":0.000045199744,"threshold_uncertainty_score":0.28842878},"labels":[],"label_agreement":null},{"id":"W1992943635","doi":"10.1016/s0378-1119(01)00533-9","title":"The human cDNA for a homologue of the plant enzyme 1-aminocyclopropane-1-carboxylate synthase encodes a protein lacking that activity","year":2001,"lang":"en","type":"article","venue":"Gene","topic":"Folate and B Vitamins Research","field":"Medicine","cited_by":17,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institute of General Medical Sciences; National Institutes of Health; Baugarten Stiftung; Chinese Academy of Agricultural Sciences; Public Health Agency of Canada","keywords":"Biology; Biochemistry; Complementary DNA; Peptide sequence; Enzyme; Fugu; Transferase; Gene; Zebrafish","score_opus":0.07661655792297387,"score_gpt":0.31741364648727227,"score_spread":0.2407970885642984,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1992943635","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99609965,0.00042469497,0.00012561903,0.0010647852,0.00006270117,0.0014734116,0.00005363191,0.00002654015,0.0006689816],"genre_scores_gemma":[0.99647284,0.0000945201,0.0001324566,0.000046364843,0.00013648155,0.00019129562,0.000013086272,0.000022649221,0.0028903207],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9987135,0.000100858255,0.0001761494,0.0002371115,0.00035357612,0.00041881687],"domain_scores_gemma":[0.99902636,0.00014936291,0.00010647803,0.00056236883,0.000080505844,0.00007493225],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005510626,0.0001438318,0.00024067909,0.000056717054,0.0003694286,0.00002561303,0.00026472122,0.000095981326,0.000020683618],"category_scores_gemma":[0.00015426957,0.00007398249,0.00014942554,0.00016833424,0.0002003687,0.000046076413,0.00012212004,0.00024126185,0.000005474904],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00041079544,0.00016384305,0.0035351936,0.00009381065,0.00010798416,0.0000749776,0.00021404903,0.000002605829,0.9828123,0.00009000252,0.00022907363,0.01226537],"study_design_scores_gemma":[0.0011342417,0.00039922146,0.026930932,0.00013847074,0.00006253778,0.00013240399,0.0001056077,0.0004109431,0.9637977,0.00022176618,0.00655215,0.00011401538],"about_ca_topic_score_codex":0.0003600901,"about_ca_topic_score_gemma":0.0003298079,"teacher_disagreement_score":0.023395738,"about_ca_system_score_codex":0.000057461293,"about_ca_system_score_gemma":0.00010895197,"threshold_uncertainty_score":0.30169183},"labels":[],"label_agreement":null},{"id":"W1993234864","doi":"10.1016/s0378-1119(00)00234-1","title":"Cotranscription of 5S rRNA–tRNAArg(ACG) from Brassica napus chloroplasts and processing of their intergenic spacer","year":2000,"lang":"en","type":"article","venue":"Gene","topic":"RNA modifications and cancer","field":"Biochemistry, Genetics and Molecular Biology","cited_by":15,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"","keywords":"Biology; Transfer RNA; Ribosomal Intergenic Spacer analysis; Ribosomal RNA; Genetics; 23S ribosomal RNA; Intergenic region; Operon; Internal transcribed spacer; Gene; Spacer DNA; Chloroplast DNA; Chloroplast; 5S ribosomal RNA; RNA; Genome; Ribosome; Escherichia coli","score_opus":0.007049307998855407,"score_gpt":0.21325593371507426,"score_spread":0.20620662571621884,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1993234864","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.993115,0.00533326,0.0009267507,0.00006500128,0.000054351447,0.00006533378,0.00006720688,0.000004011911,0.00036909652],"genre_scores_gemma":[0.9973187,0.0015120395,0.00043600056,0.000036722293,0.000096502285,0.000007921181,0.00007150986,0.000011087686,0.0005095407],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9994996,0.000017035778,0.00015631305,0.00017798357,0.000058767295,0.00009030063],"domain_scores_gemma":[0.99967,0.000002792497,0.0000680197,0.00017890589,0.000047937934,0.000032299657],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000042082982,0.00008129619,0.000109032415,0.00001865608,0.000028504364,0.000007136563,0.00006912433,0.00007887701,0.0001669403],"category_scores_gemma":[0.000003455612,0.000070482376,0.00004469251,0.000051008185,0.00007176683,0.000004350191,0.000014105156,0.000035720117,0.000001640842],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000872171,0.00003391518,0.0006755949,0.000015585076,0.000030294012,1.5328946e-7,0.0001651678,0.000028158896,0.93373895,0.000004572939,0.000164994,0.06505538],"study_design_scores_gemma":[0.0003427255,0.000088333916,0.010304421,0.000022721393,0.00001901442,0.0000030596652,0.0000753039,0.000120510325,0.97555643,0.000044260385,0.013341045,0.0000821519],"about_ca_topic_score_codex":0.000059776892,"about_ca_topic_score_gemma":0.00005478486,"teacher_disagreement_score":0.06497323,"about_ca_system_score_codex":0.0000050761805,"about_ca_system_score_gemma":0.000035436162,"threshold_uncertainty_score":0.28741878},"labels":[],"label_agreement":null},{"id":"W1993722975","doi":"10.1016/j.gene.2012.04.004","title":"Myocyte enhancer factor-2 and cardiac muscle gene expression during hibernation in thirteen-lined ground squirrels","year":2012,"lang":"en","type":"article","venue":"Gene","topic":"Bat Biology and Ecology Studies","field":"Agricultural and Biological Sciences","cited_by":37,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Carleton University","funders":"Natural Sciences and Engineering Research Council of Canada; Canada Research Chairs; U.S. Department of Agriculture","keywords":"Torpor; Biology; MEF2C; Internal medicine; Endocrinology; Hibernation (computing); Myocyte; Gene expression; Gene; Genetics; Thermoregulation","score_opus":0.02240043370191857,"score_gpt":0.22761663733711526,"score_spread":0.2052162036351967,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1993722975","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99568725,0.00330628,0.0000011929043,0.00032740826,0.00041129088,0.00010815078,0.000016504258,0.000027913418,0.000114015835],"genre_scores_gemma":[0.99827635,0.0008434845,0.000071241295,0.00005705659,0.00045229026,0.000024765293,0.000023044115,7.3746827e-7,0.00025103986],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99926233,0.00006838361,0.00012763155,0.0001916859,0.00005725993,0.00029270127],"domain_scores_gemma":[0.9997769,0.0000713232,0.00004818711,0.000035083354,0.000016971535,0.000051531093],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015124505,0.00010128183,0.00015028159,0.000010778374,0.00020608713,0.000009586992,0.00006643675,0.00014249419,0.000104053106],"category_scores_gemma":[0.000020136473,0.00004189036,0.000032805863,0.00007802538,0.000055642216,0.00014928519,0.00010124343,0.00008617557,0.000024091998],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000016559823,0.000025903995,0.16020156,0.0000019588733,0.000008539064,6.8703093e-7,0.00020185328,4.970107e-7,0.83309615,0.000006476826,0.000029518185,0.0064102653],"study_design_scores_gemma":[0.000105454004,0.000028208762,0.790663,0.000003818436,0.0000039113656,0.0000010592215,0.00008608434,0.0000011342901,0.20814812,0.000034043034,0.00084028294,0.00008487327],"about_ca_topic_score_codex":0.000085716594,"about_ca_topic_score_gemma":0.00015677985,"teacher_disagreement_score":0.63046145,"about_ca_system_score_codex":0.000026523412,"about_ca_system_score_gemma":0.0000016656016,"threshold_uncertainty_score":0.17082393},"labels":[],"label_agreement":null},{"id":"W1994765082","doi":"10.1016/j.gene.2014.10.050","title":"Identification and expression analysis of cold and freezing stress responsive genes of Brassica oleracea","year":2014,"lang":"en","type":"article","venue":"Gene","topic":"Plant Stress Responses and Tolerance","field":"Agricultural and Biological Sciences","cited_by":16,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Rural Development Administration; Korea Forest Service; Ministry of Agriculture, Food and Rural Affairs; Ministry of Oceans and Fisheries; Ontario Ministry of Agriculture, Food and Rural Affairs","keywords":"Biology; Brassica rapa; Brassica; Gene; Brassica oleracea; Cold-shock domain; Cold stress; Microarray analysis techniques; Gene expression profiling; Microarray; Genetics; Gene expression; Botany; RNA","score_opus":0.010161390350019107,"score_gpt":0.21234050683131747,"score_spread":0.20217911648129835,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1994765082","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9986869,0.00084200007,0.000044053264,0.0001327111,0.000015706246,0.0000482149,0.00020715018,0.0000056349104,0.000017595901],"genre_scores_gemma":[0.999377,0.00037456295,0.000086677624,0.000013956133,0.000025667048,0.0000027587873,0.000028335719,3.3226183e-7,0.000090704634],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99943113,0.00007919457,0.00015943762,0.00015571548,0.00010137541,0.00007314739],"domain_scores_gemma":[0.99946815,0.00025363066,0.00014406157,0.000049245355,0.000049405393,0.00003551727],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000119962395,0.00005558522,0.00017110218,0.000028397944,0.00006263459,0.000014241208,0.00006619663,0.00003933804,0.000013015787],"category_scores_gemma":[0.00004106292,0.000023694975,0.000033632106,0.00022098025,0.00005053352,0.0000566271,0.000040870684,0.000021624835,2.3418148e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006167834,0.000014464778,0.021825235,0.000007640134,0.000027425454,3.07427e-7,0.000032747485,0.00006105744,0.9597422,0.000063786276,0.000011801933,0.018151678],"study_design_scores_gemma":[0.000047049623,0.00003274422,0.32125342,0.00001811855,0.000046385212,3.7484782e-7,0.000043942415,0.001047596,0.67699593,0.000013016509,0.00046149336,0.000039939867],"about_ca_topic_score_codex":0.00008244455,"about_ca_topic_score_gemma":0.00014371627,"teacher_disagreement_score":0.29942816,"about_ca_system_score_codex":0.0000017501269,"about_ca_system_score_gemma":0.0000017034037,"threshold_uncertainty_score":0.0966253},"labels":[],"label_agreement":null},{"id":"W1995136188","doi":"10.1016/j.gene.2014.02.060","title":"Identification of rice genes associated with cosmic-ray response via co-expression gene network analysis","year":2014,"lang":"en","type":"article","venue":"Gene","topic":"Bioinformatics and Genomic Networks","field":"Biochemistry, Genetics and Molecular Biology","cited_by":10,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Atomic Energy of Canada Limited; Korea Atomic Energy Research Institute","keywords":"Biology; Gene; Gene expression profiling; Gene expression; Microarray analysis techniques; DNA microarray; Microarray; Genetics; Regulation of gene expression; Computational biology; Molecular biology","score_opus":0.004790625089010425,"score_gpt":0.21925464356033375,"score_spread":0.21446401847132332,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1995136188","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.78298694,0.00047059346,0.216211,0.0000242161,0.0000627745,0.00011293275,0.000034755016,0.000010075792,0.00008673208],"genre_scores_gemma":[0.9960167,0.00007427524,0.0023797553,0.00013172894,0.00017093147,0.000012705443,0.00084666116,0.000018197588,0.00034904174],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.998759,0.00018063099,0.0004013086,0.000255205,0.00016200129,0.00024187172],"domain_scores_gemma":[0.99880743,0.000040196544,0.00040857145,0.0005247048,0.00014606431,0.000073029274],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009817012,0.00014955532,0.00023900084,0.00006684985,0.00010761144,0.00002195063,0.00020361131,0.00017717102,0.000009968734],"category_scores_gemma":[0.000046091267,0.00012824235,0.00011265908,0.0003307687,0.00006421474,0.0000043624445,0.00006091193,0.000061590625,0.0000069725193],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00039055885,0.00003648133,0.0015568732,0.000007274528,0.00036781325,3.7782837e-7,0.00003681341,0.025539922,0.97008294,0.0000027775673,0.00097639055,0.0010017672],"study_design_scores_gemma":[0.00063843885,0.0002617837,0.027515689,0.000011674931,0.00033371247,0.000002968146,0.00001506595,0.018031083,0.94988894,0.0000727895,0.0029633818,0.00026448793],"about_ca_topic_score_codex":0.0000067922942,"about_ca_topic_score_gemma":0.000013970314,"teacher_disagreement_score":0.21383125,"about_ca_system_score_codex":0.00001611169,"about_ca_system_score_gemma":0.00003596516,"threshold_uncertainty_score":0.5229571},"labels":[],"label_agreement":null},{"id":"W1996000819","doi":"10.1016/j.gene.2004.04.021","title":"Regulation of alternative SRC promoter usage in HepG2 hepatocellular carcinoma cells","year":2004,"lang":"en","type":"article","venue":"Gene","topic":"Ubiquitin and proteasome pathways","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Saskatchewan Cancer Agency; University of Saskatchewan","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Biology; Hepatocellular carcinoma; Proto-oncogene tyrosine-protein kinase Src; Cancer research; Computational biology; Molecular biology; Cell biology; Genetics; Receptor","score_opus":0.014922381839210755,"score_gpt":0.22447411697765984,"score_spread":0.2095517351384491,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1996000819","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9970899,0.00026975776,0.0015169859,0.00004866039,0.00007251517,0.00025753365,0.000021687212,0.0000043181412,0.0007186123],"genre_scores_gemma":[0.99718416,0.000027651517,0.0023381116,0.00005171045,0.000113497714,0.000017375469,0.000067538036,0.000013352443,0.00018659595],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9993191,0.00003975736,0.00017250316,0.00022021879,0.00009629688,0.0001521456],"domain_scores_gemma":[0.9996221,0.0000024032843,0.000071485294,0.00022366048,0.000042633805,0.00003769956],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013461463,0.00009676238,0.00010627438,0.000041573712,0.000018197168,0.000005364457,0.00010878605,0.00009223832,0.000018503828],"category_scores_gemma":[0.000010770072,0.000096488104,0.000050457857,0.000068364665,0.00003705104,0.0000028412721,0.00005496413,0.000049157396,0.00001156363],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00003214489,0.00011947851,0.0027322953,0.00001825373,0.000008438002,0.000007644418,0.00018748493,0.00012228239,0.996254,0.0000578492,0.0000144356745,0.0004456888],"study_design_scores_gemma":[0.001254709,0.00018453794,0.003730203,0.000014371431,0.0000041057483,0.0000058759542,0.000012271938,0.000118742704,0.9932778,0.0007612004,0.0005290489,0.00010712278],"about_ca_topic_score_codex":0.000102819155,"about_ca_topic_score_gemma":0.000020604404,"teacher_disagreement_score":0.002976194,"about_ca_system_score_codex":0.000019179335,"about_ca_system_score_gemma":0.000049767543,"threshold_uncertainty_score":0.39346707},"labels":[],"label_agreement":null},{"id":"W1996119816","doi":"10.1016/s0378-1119(03)00660-7","title":"Thermophilic prokaryotes have characteristic patterns of codon usage, amino acid composition and nucleotide content","year":2003,"lang":"en","type":"article","venue":"Gene","topic":"RNA and protein synthesis mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":193,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Ottawa","funders":"","keywords":"Codon usage bias; Thermophile; Biology; Amino acid; Thermostability; Genetics; Nucleotide; GC-content; Genome; Synonymous substitution; Isoleucine; Biochemistry; Gene; Leucine; Bacteria; Enzyme","score_opus":0.020579038875133928,"score_gpt":0.2239521076828326,"score_spread":0.20337306880769868,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1996119816","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9955962,0.00060324866,0.0032136277,0.000043480453,0.000064124964,0.00023094738,0.000044216635,0.000005685145,0.00019849223],"genre_scores_gemma":[0.9987403,0.00022879314,0.0005860507,0.00012510132,0.000048431204,0.000022544424,0.000064149885,0.00001568112,0.00016895728],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99933463,0.00008723541,0.00016034766,0.0002072523,0.00007536233,0.00013517494],"domain_scores_gemma":[0.9996082,0.000007779293,0.00009253404,0.00020032596,0.000042193853,0.00004896229],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012900178,0.00011260105,0.00013902498,0.000020753709,0.000043649983,0.000012117945,0.00006741823,0.00007768806,0.00003759204],"category_scores_gemma":[0.00002709734,0.00010159509,0.0000433869,0.000014875961,0.00003352074,0.0000026794862,0.00002910385,0.00003070835,0.0000036917268],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000037993374,0.000040251824,0.0066785854,0.000027099386,0.000028644545,0.0000027503716,0.000037305104,4.4489659e-7,0.9903661,0.00011466551,0.000005657489,0.0026604936],"study_design_scores_gemma":[0.00026449654,0.00020441264,0.022342293,0.00002202751,0.00001842767,0.000022436812,0.000030151856,0.000003832354,0.9765458,0.00008357082,0.00034935054,0.000113187336],"about_ca_topic_score_codex":0.000011169626,"about_ca_topic_score_gemma":0.000003508724,"teacher_disagreement_score":0.015663706,"about_ca_system_score_codex":0.000004453497,"about_ca_system_score_gemma":0.000011633806,"threshold_uncertainty_score":0.41429275},"labels":[],"label_agreement":null},{"id":"W1996541325","doi":"10.1016/j.gene.2014.05.049","title":"Comparison of Acetyl-CoA carboxylase 1 (Acc-1) gene diversity among different Triticeae genomes","year":2014,"lang":"en","type":"article","venue":"Gene","topic":"Genetic Mapping and Diversity in Plants and Animals","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Saint Mary's University","funders":"Natural Sciences and Engineering Research Council of Canada; Anhui Agricultural University; Anhui University","keywords":"Triticeae; Biology; Genome; Genetics; Nucleotide diversity; Genetic diversity; Evolutionary biology; Gene; Population; Haplotype; Allele","score_opus":0.020059805717704972,"score_gpt":0.2475187834119944,"score_spread":0.22745897769428944,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1996541325","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99629325,0.0008404542,0.0010441488,0.000039602004,0.0001753865,0.00010305112,0.00008408119,0.000013271927,0.0014067801],"genre_scores_gemma":[0.9982545,0.00020729005,0.00045027048,0.00008475498,0.0001832398,0.0000022031595,0.00015078804,0.000008658322,0.00065832876],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9989964,0.00006402075,0.00020811644,0.00030767385,0.00017226949,0.00025151877],"domain_scores_gemma":[0.999355,0.000016441223,0.000116569354,0.00031002043,0.00007370947,0.0001282558],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013354686,0.00016709509,0.00028750452,0.00004427149,0.00019387252,0.000016028442,0.00027620583,0.00013295862,0.000066946435],"category_scores_gemma":[0.000033500826,0.00015486,0.00012897176,0.000046003166,0.00009791738,0.0000023530768,0.00048007705,0.00006667333,0.000013984439],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006106717,0.00017358066,0.22870676,0.00003464608,0.00007706606,0.0000015107438,0.00017346574,0.00013613506,0.7677019,0.00002004494,0.0017398831,0.0011739302],"study_design_scores_gemma":[0.001049702,0.0005265858,0.109666355,0.000012749313,0.000093670475,0.0000037995358,0.00023446124,0.00024607856,0.8783724,0.000042021526,0.009468545,0.00028368962],"about_ca_topic_score_codex":0.00008054334,"about_ca_topic_score_gemma":0.00003324504,"teacher_disagreement_score":0.119040415,"about_ca_system_score_codex":0.000007701589,"about_ca_system_score_gemma":0.000014632898,"threshold_uncertainty_score":0.6315007},"labels":[],"label_agreement":null},{"id":"W1996701598","doi":"10.1016/s0378-1119(03)00499-2","title":"Molecular characterization of a new gene, CEAL1, encoding for a carcinoembryonic antigen-like protein with a highly conserved domain of eukaryotic translation initiation factors","year":2003,"lang":"en","type":"article","venue":"Gene","topic":"Monoclonal and Polyclonal Antibodies Research","field":"Medicine","cited_by":21,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Mount Sinai Hospital","funders":"","keywords":"Biology; Exon; Pseudogene; Gene; Genetics; Molecular biology; Alternative splicing; Homology (biology); Genome","score_opus":0.04438572275429522,"score_gpt":0.279130671330024,"score_spread":0.23474494857572878,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1996701598","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9833166,0.00026467908,0.014585954,0.00026478225,0.000032583554,0.0013265742,0.00006495402,0.000013557077,0.00013033947],"genre_scores_gemma":[0.9921896,0.000049256527,0.0070651444,0.000048424856,0.00002991773,0.000031804037,0.0003938963,0.00002292227,0.00016907344],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9988341,0.000077100325,0.00034452666,0.0002020683,0.00032149578,0.0002207158],"domain_scores_gemma":[0.9993335,0.000039984137,0.00017384313,0.00015249224,0.00019351613,0.00010667049],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00017709858,0.00014144521,0.0003152624,0.00015588707,0.000048370162,0.0000066266834,0.00005391026,0.00007622897,0.000028764105],"category_scores_gemma":[0.00003111041,0.000114058705,0.000096127544,0.0002705185,0.000052898442,0.00006834891,0.000006577776,0.00007259619,9.1936994e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006432098,0.00007935654,0.029158255,0.00036194545,0.00008800883,0.000008655452,0.0005869324,0.000014971796,0.96826005,0.0005240407,0.0000031896575,0.00027140108],"study_design_scores_gemma":[0.0017730991,0.00065022224,0.116699174,0.00012482844,0.000052815118,0.000015452386,0.00004335708,0.00018389759,0.880042,0.000117090196,0.00019498229,0.000103042694],"about_ca_topic_score_codex":0.00013174486,"about_ca_topic_score_gemma":0.000016670729,"teacher_disagreement_score":0.08821799,"about_ca_system_score_codex":0.000029040273,"about_ca_system_score_gemma":0.00039749802,"threshold_uncertainty_score":0.4651179},"labels":[],"label_agreement":null},{"id":"W1996783283","doi":"10.1016/j.gene.2015.03.027","title":"Lineage-specific loss of FGF17 within the avian orders Galliformes and Passeriformes","year":2015,"lang":"en","type":"article","venue":"Gene","topic":"Chromosomal and Genetic Variations","field":"Agricultural and Biological Sciences","cited_by":8,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"National Institute of Dental and Craniofacial Research; Canadian Institutes of Health Research; Canadian HIV Trials Network, Canadian Institutes of Health Research","keywords":"Biology; Galliformes; Genome; Clade; Gene duplication; Lineage (genetic); Evolutionary biology; Genetics; Monophyly; Phylogenetics; Gene; Zoology","score_opus":0.02916600813427078,"score_gpt":0.21364061568427703,"score_spread":0.18447460755000625,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1996783283","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99675745,0.00036067597,0.000007525209,0.0022376787,0.000089746696,0.00008686618,0.000022706403,0.000013823666,0.0004235055],"genre_scores_gemma":[0.99900556,0.00009007154,0.00048213935,0.000084267005,0.00015816408,0.0000054405346,0.000016901193,4.7998884e-7,0.00015699002],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9995123,0.000024179746,0.00013284532,0.00011259959,0.00011426022,0.00010381202],"domain_scores_gemma":[0.9997159,0.000054415774,0.000060838665,0.00004619436,0.000057433463,0.00006521717],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015542716,0.00006450625,0.000083312436,0.0000037807413,0.000099579454,0.000024372648,0.00012111697,0.00003757627,0.00006271137],"category_scores_gemma":[0.000026630205,0.000019160047,0.000028339384,0.00013862737,0.000076260854,0.00003529735,0.000044737342,0.00004064498,0.00000821139],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015810474,0.00035197084,0.32295543,0.000023927818,0.00011486242,0.000011482994,0.004161661,0.0001919204,0.5825477,0.015744627,0.005539117,0.06819915],"study_design_scores_gemma":[0.0006382405,0.0007842588,0.7733974,0.000022786251,0.00003402909,0.00006165757,0.0034859246,0.0002298735,0.07870727,0.018583948,0.12364682,0.00040782365],"about_ca_topic_score_codex":0.00010452774,"about_ca_topic_score_gemma":0.0006685732,"teacher_disagreement_score":0.50384045,"about_ca_system_score_codex":0.0000047123954,"about_ca_system_score_gemma":0.000010363594,"threshold_uncertainty_score":0.078132406},"labels":[],"label_agreement":null},{"id":"W1997560984","doi":"10.1016/j.gene.2007.01.018","title":"Identification and transcription of transfer RNA genes in dinoflagellate plastid minicircles","year":2007,"lang":"en","type":"article","venue":"Gene","topic":"Protist diversity and phylogeny","field":"Biochemistry, Genetics and Molecular Biology","cited_by":32,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"Minicircle; Biology; Transfer RNA; Gene; Dinoflagellate; Genetics; Chloroplast DNA; Genome; DNA; RNA; Botany","score_opus":0.00983018220809483,"score_gpt":0.21915228575222717,"score_spread":0.20932210354413233,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1997560984","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99302137,0.0012116407,0.005462167,0.000017822333,0.000058908114,0.000086905915,0.000026683849,0.000002332539,0.000112167465],"genre_scores_gemma":[0.9992244,0.00047642252,0.00014710793,0.000018494262,0.00003401012,0.0000012581801,0.000043334647,0.000003871515,0.00005104855],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9995852,0.000014893126,0.00012854114,0.00013484071,0.000046714096,0.00008977781],"domain_scores_gemma":[0.9998532,0.0000042893216,0.000016827114,0.00008223301,0.000018838587,0.00002462231],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00016805792,0.00004992803,0.000060819046,0.000037946927,0.000021348582,0.0000038541625,0.000053164156,0.00007324388,0.000004591747],"category_scores_gemma":[0.0000044987673,0.000056126442,0.000025762522,0.000043406428,0.00004172058,0.0000025472361,0.000009624243,0.000023167217,0.000001097539],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009416609,0.00001962537,0.007717267,0.00001893363,0.000010025039,0.0000018498354,0.00012817014,0.000017432916,0.9863053,0.000017926668,0.000012993016,0.0056563085],"study_design_scores_gemma":[0.00028062655,0.000047109967,0.14756101,0.0000038264993,0.000007811042,0.0000032858259,0.000035583493,0.000006845828,0.8516748,0.000036685553,0.00028843118,0.000054010547],"about_ca_topic_score_codex":0.000016896583,"about_ca_topic_score_gemma":0.00008154148,"teacher_disagreement_score":0.13984375,"about_ca_system_score_codex":0.0000032449213,"about_ca_system_score_gemma":0.0000079649335,"threshold_uncertainty_score":0.228877},"labels":[],"label_agreement":null},{"id":"W1999381901","doi":"10.1016/s0378111902010892","title":"Evidence implicating Ku antigen as a structural factor in RNA polymerase II-mediated transcription","year":2003,"lang":"en","type":"article","venue":"Gene","topic":"RNA Research and Splicing","field":"Biochemistry, Genetics and Molecular Biology","cited_by":15,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Ottawa","funders":"","keywords":"Biology; RNA polymerase II; Ku70; Transcription factor II D; Transcription (linguistics); Molecular biology; Chromatin; General transcription factor; DNA-binding domain; Transcription factor; Promoter; DNA; Gene; RNA polymerase; Cell biology; RNA; Genetics; Gene expression; DNA repair","score_opus":0.026111853995164795,"score_gpt":0.30175306732918034,"score_spread":0.27564121333401553,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1999381901","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9960984,0.00324379,0.00017655086,0.0001183589,0.000048790564,0.00016230877,0.000013557713,0.0000087950375,0.00012943929],"genre_scores_gemma":[0.99851,0.0005083157,0.00034221602,0.00016419528,0.0000577863,0.0000145253425,0.000043257372,0.000012836355,0.00034684135],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9990222,0.000077231714,0.00016864427,0.00027953793,0.00012788955,0.0003245341],"domain_scores_gemma":[0.99957937,0.000011943592,0.00003763241,0.00022374603,0.000037348178,0.00010998164],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013572398,0.00010770806,0.0000988152,0.00004668084,0.000096470096,0.000020121772,0.00013055815,0.00008971833,0.00007149896],"category_scores_gemma":[0.00026566468,0.0001001243,0.000050258997,0.00012551848,0.00002870803,0.0000077341565,0.00002901922,0.00009586409,0.000011781017],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000038551098,0.000009449471,0.008874492,0.0000061681867,0.000009984679,0.000005431534,0.00007172826,0.000008908585,0.98722345,0.000011457833,0.00002906563,0.0037113244],"study_design_scores_gemma":[0.0003530806,0.00016793936,0.020756783,0.000017699225,0.0000018370996,0.00001708517,0.000038963855,0.00009580003,0.97801733,0.00002550217,0.0003849279,0.0001230619],"about_ca_topic_score_codex":0.00022566822,"about_ca_topic_score_gemma":0.00008239619,"teacher_disagreement_score":0.01188229,"about_ca_system_score_codex":0.000019185676,"about_ca_system_score_gemma":0.00009799513,"threshold_uncertainty_score":0.40829504},"labels":[],"label_agreement":null},{"id":"W1999389497","doi":"10.1016/s0378-1119(00)00472-8","title":"Chargaff's legacy","year":2000,"lang":"en","type":"review","venue":"Gene","topic":"Plant Virus Research Studies","field":"Agricultural and Biological Sciences","cited_by":103,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Queen's University","funders":"National Research Council Canada","keywords":"Biology; DNA; Genetics; Genome; Gene duplication; RNA; Base pair; Nucleic acid; Computational biology; Gene","score_opus":0.13353625674703087,"score_gpt":0.33332181372599795,"score_spread":0.19978555697896708,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1999389497","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000044980778,0.9952154,1.493241e-8,0.0000740621,0.00006458997,0.00028059664,0.00088609906,0.00005725429,0.003377],"genre_scores_gemma":[8.9543727e-7,0.9956903,0.000009121333,0.000035806508,0.0006985864,0.00006134335,0.000616485,9.159439e-7,0.002886539],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99883896,0.00008970197,0.00019806357,0.00030372478,0.00021555641,0.0003539804],"domain_scores_gemma":[0.99962026,0.0001597186,0.00006073224,0.000057649126,0.000015082355,0.00008657059],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00011664237,0.00022008306,0.0007007965,0.0000128172915,0.00015509856,0.00007802503,0.0004112869,0.00013764293,0.0019311098],"category_scores_gemma":[0.000022973403,0.000057474404,0.00026508298,0.00028986402,0.00003787753,0.000052541334,0.00011857645,0.0001915903,0.0025294975],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[8.8469034e-7,0.000012186865,6.3264196e-8,0.0002059474,0.000030140849,0.000015179128,0.0000017856652,5.996205e-9,0.00014036415,0.0000032376854,0.0102739185,0.9893163],"study_design_scores_gemma":[0.00001117683,0.00003078026,0.000004332254,0.0005026744,0.000037322254,0.000018442424,0.0000019361567,7.38002e-8,0.000015894311,0.00001019978,0.99919903,0.0001681561],"about_ca_topic_score_codex":0.00005908306,"about_ca_topic_score_gemma":0.000049086055,"teacher_disagreement_score":0.98914814,"about_ca_system_score_codex":0.000026793134,"about_ca_system_score_gemma":0.000017260802,"threshold_uncertainty_score":0.99898124},"labels":[],"label_agreement":null},{"id":"W1999657498","doi":"10.1016/j.gene.2008.10.022","title":"A serine/threonine protein phosphatase-like protein, CaPTC8, from Candida albicans defines a new PPM subfamily","year":2008,"lang":"en","type":"article","venue":"Gene","topic":"Peptidase Inhibition and Analysis","field":"Medicine","cited_by":14,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Biotechnology Research Institute; Montreal General Hospital","funders":"Université de Genève","keywords":"Biology; Subfamily; Candida albicans; Threonine; Serine; Protein phosphatase 2; Phosphatase; Biochemistry; Microbiology; Phosphorylation; Gene","score_opus":0.022097370767564312,"score_gpt":0.22934765085491915,"score_spread":0.20725028008735483,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1999657498","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99140334,0.001941434,0.0007140579,0.0036398112,0.000036606903,0.00081840693,0.00030317451,0.00019824153,0.0009449336],"genre_scores_gemma":[0.96351784,0.000085257896,0.0074146306,0.0024165825,0.0006331249,0.00018085758,0.0011178504,0.00005667078,0.02457716],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99815315,0.0000380181,0.00041884882,0.0005087413,0.0004476724,0.00043354987],"domain_scores_gemma":[0.99865395,0.000013907714,0.00012957545,0.00057095574,0.0001301182,0.000501516],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.000078565114,0.00030859926,0.0005167948,0.00014418073,0.00016283862,0.00002055418,0.00012716847,0.00012307105,0.0026989228],"category_scores_gemma":[0.000069517366,0.000269132,0.00022136145,0.00050104054,0.00010492921,0.00009411522,0.000057851903,0.000220842,0.00045202504],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000650805,0.0005761496,0.0069183875,0.00009476731,0.00045585263,0.0022882435,0.0005741399,0.000028651575,0.92838496,0.00017380109,0.056217473,0.0036367758],"study_design_scores_gemma":[0.00846556,0.00054001523,0.02892406,0.00092789007,0.00032514575,0.00041584796,0.00017989537,0.00038040403,0.8872512,0.0003191118,0.07139386,0.0008770202],"about_ca_topic_score_codex":0.017491665,"about_ca_topic_score_gemma":0.0015000144,"teacher_disagreement_score":0.041133765,"about_ca_system_score_codex":0.000092845316,"about_ca_system_score_gemma":0.0004699013,"threshold_uncertainty_score":0.9999761},"labels":[],"label_agreement":null},{"id":"W1999952948","doi":"10.1016/j.gene.2008.02.003","title":"Quickly evolving histones, nucleosome stability and chromatin folding: All about histone H2A.Bbd","year":2008,"lang":"en","type":"review","venue":"Gene","topic":"Genomics and Chromatin Dynamics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":57,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Victoria","funders":"","keywords":"Biology; Nucleosome; Histone; Histone code; Genetics; Chromatin; Histone H2A; Histone methylation; Histone H1; Histone-modifying enzymes; Chromatin remodeling; Computational biology; Gene; DNA methylation; Gene expression","score_opus":0.025236782026516504,"score_gpt":0.28658420182983235,"score_spread":0.26134741980331583,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1999952948","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.019122312,0.9789356,0.00014632211,0.000018033403,0.0003522099,0.00058386155,0.0002035851,0.000030063049,0.0006080095],"genre_scores_gemma":[0.0013619247,0.99237776,0.0038326487,0.00008191243,0.0003883159,0.00007138075,0.001124142,0.00014203296,0.00061986246],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.997319,0.00013158208,0.00081985095,0.0009925206,0.00020716643,0.00052991026],"domain_scores_gemma":[0.9980916,0.00002788768,0.0005198856,0.0010404881,0.00009451814,0.00022565949],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0002253896,0.00065572857,0.0012624243,0.00009273581,0.00019265198,0.00005154954,0.00047191168,0.00065912923,0.000093387236],"category_scores_gemma":[0.00007978687,0.000645101,0.00044255605,0.00010866977,0.00020853405,0.0000052075125,0.00046271825,0.00027190786,0.000036929887],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00004180504,0.0005595443,0.000084851556,0.022780947,0.0014596033,0.00012312231,0.00055631425,0.000012180007,0.13156635,0.00014691977,0.01803561,0.82463276],"study_design_scores_gemma":[0.00028979784,0.0001386813,0.000057902907,0.0005061577,0.00024285693,0.00036639767,0.000010064658,0.00006345387,0.0005635467,0.000023294615,0.99699473,0.00074309274],"about_ca_topic_score_codex":0.00005071631,"about_ca_topic_score_gemma":0.00004023597,"teacher_disagreement_score":0.97895914,"about_ca_system_score_codex":0.0002604403,"about_ca_system_score_gemma":0.00038507272,"threshold_uncertainty_score":0.99960005},"labels":[],"label_agreement":null},{"id":"W2000309642","doi":"10.1016/j.gene.2003.08.015","title":"Blocking the T4 lysis inhibition phenotype","year":2003,"lang":"en","type":"article","venue":"Gene","topic":"Bacterial Genetics and Biotechnology","field":"Biochemistry, Genetics and Molecular Biology","cited_by":15,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Biology; Prophage; Lysis; Escherichia coli; Lysogenic cycle; Molecular biology; Periplasmic space; Plasmid; Phenotype; Gene; Lysogen; Lambda phage; Microbiology; Bacteriophage; Genetics","score_opus":0.006933077502407847,"score_gpt":0.2045746195947404,"score_spread":0.19764154209233256,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2000309642","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99621993,0.0007493092,0.0008343936,0.00040829816,0.00022308518,0.000082365346,0.0000065113472,0.000011988495,0.0014641236],"genre_scores_gemma":[0.99790674,0.00022559182,0.0008967369,0.00040288104,0.00020649984,0.000009349327,0.000037132777,0.000011873546,0.0003031935],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99943346,0.00004178923,0.00010411225,0.00019666305,0.000054935525,0.00016907188],"domain_scores_gemma":[0.9995887,0.0000029006767,0.00004054652,0.00030504246,0.00003770663,0.000025085074],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012473941,0.000086693646,0.000065487555,0.000018180895,0.000097567565,0.000018616302,0.00009241036,0.00015702285,0.0000450779],"category_scores_gemma":[0.00003915524,0.00006330219,0.000050346855,0.00008983696,0.00005862167,6.6585267e-7,0.000055068,0.000057767193,0.000023703742],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000007809651,0.000014800749,0.00011892355,0.0000014162392,0.000020111333,8.6165676e-7,0.000008881911,0.00001834073,0.9960334,0.00040760048,0.00051463,0.002853248],"study_design_scores_gemma":[0.00014573162,0.000071862494,0.0002865427,0.0000013519185,0.000013212917,0.0000137268535,0.00001663635,0.000004740123,0.87046427,0.0003127508,0.12858455,0.00008463491],"about_ca_topic_score_codex":0.0000070021956,"about_ca_topic_score_gemma":0.000022084658,"teacher_disagreement_score":0.12806992,"about_ca_system_score_codex":0.0000050346075,"about_ca_system_score_gemma":0.00002615515,"threshold_uncertainty_score":0.25813884},"labels":[],"label_agreement":null},{"id":"W2000913604","doi":"10.1016/j.gene.2009.07.014","title":"Regulation of the mouse CTP: Phosphoethanolamine cytidylyltransferase gene Pcyt2 during myogenesis","year":2009,"lang":"en","type":"article","venue":"Gene","topic":"Glycogen Storage Diseases and Myoclonus","field":"Medicine","cited_by":18,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"","keywords":"Biology; Myogenesis; Gene; Cell biology; Genetics; Computational biology","score_opus":0.008008732128795305,"score_gpt":0.2196302657204025,"score_spread":0.2116215335916072,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2000913604","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99697524,0.0015124014,0.00015551837,0.0005378961,0.00010613976,0.0003901342,0.000051151128,0.000055854027,0.00021565509],"genre_scores_gemma":[0.9964677,0.00014293053,0.0005582796,0.00039037748,0.00018947586,0.0000093591025,0.000055066994,0.000023687882,0.0021631315],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99886477,0.000026114454,0.00028792486,0.0002508927,0.00032065832,0.00024962108],"domain_scores_gemma":[0.99907404,0.0000087363715,0.00007879748,0.0005818907,0.00012119113,0.00013535246],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00007629972,0.00016628946,0.00025750283,0.00006426942,0.00009857339,0.0000075708567,0.00012198549,0.00008271806,0.00015366838],"category_scores_gemma":[0.000033444547,0.00012342437,0.00022752749,0.00027113775,0.00004302632,0.000047052847,0.00002178255,0.0000778708,0.000013096501],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003376643,0.00016737382,0.0012386568,0.000049415536,0.000042535266,0.00008717461,0.000118102245,0.00009210028,0.9948108,0.000028468698,0.00010126839,0.0029264416],"study_design_scores_gemma":[0.0012823495,0.000102895145,0.20218937,0.000020217987,0.00017203053,0.00016234399,0.000017702787,0.000038614617,0.79566944,0.000024477926,0.00021869688,0.00010185256],"about_ca_topic_score_codex":0.000047266363,"about_ca_topic_score_gemma":0.000004894285,"teacher_disagreement_score":0.20095071,"about_ca_system_score_codex":0.00006412898,"about_ca_system_score_gemma":0.00007546836,"threshold_uncertainty_score":0.50330997},"labels":[],"label_agreement":null},{"id":"W2001786524","doi":"10.1016/j.gene.2004.05.026","title":"Molecular cloning, structure, expression, and chromosomal localization of the human Osterix (SP7) gene","year":2004,"lang":"en","type":"article","venue":"Gene","topic":"Bone Metabolism and Diseases","field":"Biochemistry, Genetics and Molecular Biology","cited_by":67,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Canadian Institutes of Health Research","funders":"Canadian Institutes of Health Research","keywords":"Biology; Zinc finger; Gene; Exon; Molecular biology; Gene expression; Locus (genetics); Complementary DNA; In situ hybridization; Genetics; Transcription factor","score_opus":0.004378446831404673,"score_gpt":0.22110344631582746,"score_spread":0.21672499948442278,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2001786524","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9936162,0.003876638,0.0021745393,0.000021349224,0.000075667165,0.000100908386,0.000053047865,0.00000529738,0.00007634075],"genre_scores_gemma":[0.9989846,0.00005878111,0.00048406198,0.00021476629,0.00010083385,0.0000041498715,0.000111610105,0.000013613762,0.000027607368],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9994381,0.000030071453,0.00012712393,0.00019432919,0.000098857265,0.00011153101],"domain_scores_gemma":[0.9995446,8.3621546e-7,0.000067030924,0.00029429738,0.0000424954,0.00005070306],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00002438344,0.00009789449,0.00009009688,0.000013902243,0.00008526703,0.00001095439,0.00011173538,0.00007912899,0.000012500041],"category_scores_gemma":[0.000017156482,0.00007255407,0.00004633772,0.00005047926,0.000089288966,0.000002634,0.00013200458,0.000027518177,3.5696905e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000010295719,0.000020234707,0.0013275446,0.000011601503,0.000012428584,0.0000014763154,0.000031380645,0.00093104114,0.99735427,0.00009996223,0.00006454481,0.00013520577],"study_design_scores_gemma":[0.00055317616,0.000040335966,0.007795671,0.000010915114,0.00002838365,0.000010695749,0.000009418035,0.0000043122272,0.9900739,0.00041818173,0.00096588355,0.00008913342],"about_ca_topic_score_codex":0.000018906318,"about_ca_topic_score_gemma":0.0000068737304,"teacher_disagreement_score":0.0072803902,"about_ca_system_score_codex":0.0000031034883,"about_ca_system_score_gemma":0.000037252958,"threshold_uncertainty_score":0.2958669},"labels":[],"label_agreement":null},{"id":"W2001944063","doi":"10.1016/j.gene.2013.12.039","title":"Pathodiagnostic parameters and evaluation of O6– methyl guanine methyl transferase gene promoter methylation in meningiomas","year":2014,"lang":"en","type":"article","venue":"Gene","topic":"Meningioma and schwannoma management","field":"Medicine","cited_by":10,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Mashhad University of Medical Sciences","keywords":"Biology; Methylation; Gene; Guanine; Methyltransferase; Transferase; Molecular biology; Promoter; Genetics; DNA methylation; Biochemistry; Gene expression; Enzyme; Nucleotide","score_opus":0.04829907404945432,"score_gpt":0.3076242736852022,"score_spread":0.25932519963574785,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2001944063","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9817778,0.00086861575,0.0151177915,0.00042856377,0.00010419338,0.001102203,0.000005563449,0.000027415532,0.0005678889],"genre_scores_gemma":[0.951321,0.000020856387,0.04829116,0.00005806599,0.000047552265,0.00011283092,0.000072201205,0.000024319816,0.000052021802],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.997763,0.00044539265,0.0005240152,0.0003986939,0.00061816635,0.00025074166],"domain_scores_gemma":[0.9990227,0.00022607791,0.000116954885,0.00034518872,0.00017055857,0.000118468175],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0038667386,0.00019546523,0.00044009823,0.0003309967,0.000044430144,0.000019089664,0.00006728614,0.00009801134,0.00008636834],"category_scores_gemma":[0.00058166526,0.00017521548,0.00007857063,0.00034076953,0.00004817513,0.000093340044,0.00003275904,0.000109534376,0.0000053185354],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00023108818,0.00019755837,0.0037424553,0.00018807357,0.00015820359,0.00007739686,0.0015952712,0.000954021,0.8896187,0.00020222436,0.000052574356,0.102982424],"study_design_scores_gemma":[0.0063585774,0.0010345123,0.05951655,0.00013730279,0.0012433595,0.000087727254,0.00011275639,0.05995683,0.86885786,0.0022480187,0.00013149648,0.00031501387],"about_ca_topic_score_codex":0.00009487561,"about_ca_topic_score_gemma":0.000013282041,"teacher_disagreement_score":0.10266741,"about_ca_system_score_codex":0.00006856025,"about_ca_system_score_gemma":0.000045170418,"threshold_uncertainty_score":0.714508},"labels":[],"label_agreement":null},{"id":"W2002999576","doi":"10.1016/j.gene.2008.03.007","title":"Molecular characterization, gene expression and transcriptional regulation of cytosolic HSP90 genes in the flatfish Senegalese sole (Solea senegalensis Kaup)","year":2008,"lang":"en","type":"article","venue":"Gene","topic":"Heat shock proteins research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":98,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Genome Canada","keywords":"Biology; Metamorphosis; Gene; Gene expression; Flatfish; Messenger RNA; Transcriptome; Heat shock protein; Hsp90; Molecular biology; Transcriptional regulation; Cell biology; Genetics; Larva; Ecology; Fishery","score_opus":0.016432620774366212,"score_gpt":0.24544323366013568,"score_spread":0.22901061288576946,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2002999576","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9916175,0.001312277,0.0062212576,0.00028253638,0.000031411637,0.00036505074,0.000059029488,0.000007583499,0.00010336967],"genre_scores_gemma":[0.9961712,0.0011137911,0.0016313954,0.00014917443,0.00014399519,0.000051509807,0.0005606193,0.000025285875,0.00015306084],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99853116,0.0002174928,0.00029958432,0.00035710845,0.00034103863,0.0002536187],"domain_scores_gemma":[0.9992964,0.000010056189,0.000066710665,0.00041092673,0.00014914882,0.00006671791],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00026413193,0.00015599706,0.00017210124,0.000103892744,0.000123963,0.0000149725365,0.00018315631,0.00017493725,0.000016791777],"category_scores_gemma":[0.00004538893,0.00013412462,0.00006901314,0.00019679064,0.00013870891,0.000013002125,0.00007196364,0.00009592834,0.0000025811223],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007713549,0.00005910667,0.0027012494,0.00002592926,0.00001551545,0.000010098235,0.0002745338,0.00019878932,0.99556834,0.000020649328,0.000044894296,0.0010037671],"study_design_scores_gemma":[0.0004872839,0.000089937086,0.060443547,0.000016116195,0.0000062994295,0.00009924972,0.000024706767,0.0002491226,0.9367893,0.00002418772,0.0016370412,0.00013322571],"about_ca_topic_score_codex":0.000031816053,"about_ca_topic_score_gemma":0.00001734175,"teacher_disagreement_score":0.058779046,"about_ca_system_score_codex":0.000013562275,"about_ca_system_score_gemma":0.00010248677,"threshold_uncertainty_score":0.5469443},"labels":[],"label_agreement":null},{"id":"W2003723250","doi":"10.1016/j.gene.2006.04.012","title":"Role of p38 in stress activation of Sp1","year":2006,"lang":"en","type":"article","venue":"Gene","topic":"Cellular Mechanics and Interactions","field":"Biochemistry, Genetics and Molecular Biology","cited_by":59,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Canadian Institutes of Health Research; Hospital for Sick Children; Agence Nationale pour la Gestion des Déchets Radioactifs; Heart and Stroke Foundation of Canada","keywords":"Filamin; Biology; Sp1 transcription factor; Transfection; Molecular biology; Phosphorylation; FLNA; p38 mitogen-activated protein kinases; Cell biology; Mutant; Protein kinase A; Promoter; Regulation of gene expression; Gene; Gene expression; Cell; Biochemistry; Cytoskeleton","score_opus":0.0035823349389331066,"score_gpt":0.206926058190695,"score_spread":0.2033437232517619,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2003723250","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9969302,0.00019935724,0.00077118084,0.000012340556,0.000027629709,0.000037804766,0.00001432531,9.351254e-7,0.002006254],"genre_scores_gemma":[0.9993628,0.000025034005,0.00025182217,0.0000063553366,0.00004724531,0.000002507163,0.00011589215,0.0000041136773,0.00018417426],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.999727,0.000008429177,0.00010781887,0.000071100454,0.00003650726,0.00004914715],"domain_scores_gemma":[0.9998036,0.0000020066018,0.0000506873,0.0001047226,0.0000322003,0.000006778066],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000030275953,0.00003221583,0.000048738708,0.000026980108,0.000005738721,0.0000013032151,0.000039299015,0.000039703773,0.000021603053],"category_scores_gemma":[0.0000072963953,0.000033499076,0.000027773138,0.000040290546,0.0000065728477,0.0000012105422,0.000019243764,0.000019113653,7.8910193e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00001226851,0.000063699496,0.0008742203,0.0000041712246,0.0000043701784,7.8677914e-8,0.000007155348,0.00016977807,0.9976885,0.0003611989,0.00006867624,0.0007459044],"study_design_scores_gemma":[0.00012193763,0.000046330613,0.0029436697,0.000006148922,0.000002055136,5.5100344e-7,0.000033762502,0.00016068364,0.9930512,0.0002449646,0.0033578363,0.000030910665],"about_ca_topic_score_codex":0.00022621648,"about_ca_topic_score_gemma":0.000097337674,"teacher_disagreement_score":0.0046373294,"about_ca_system_score_codex":0.0000037572179,"about_ca_system_score_gemma":0.000012888099,"threshold_uncertainty_score":0.13660526},"labels":[],"label_agreement":null},{"id":"W2003874924","doi":"10.1016/s0378-1119(02)00687-x","title":"Heat shock protein genes and their functional significance in fish","year":2002,"lang":"en","type":"review","venue":"Gene","topic":"Heat shock proteins research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":650,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute for Marine Biosciences; University of British Columbia","funders":"Networks of Centres of Excellence of Canada; Natural Sciences and Engineering Research Council of Canada","keywords":"Biology; Heat shock protein; Abiotic component; Fish <Actinopterygii>; Heat shock; Computational biology; Gene; Shock (circulatory); Evolutionary biology; Cell biology; Genetics; Ecology; Fishery","score_opus":0.051200147759112954,"score_gpt":0.3021366148992925,"score_spread":0.25093646714017953,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2003874924","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0023713165,0.9954649,0.00014271068,0.00005680653,0.00006210675,0.001449894,0.00013530983,0.000010221124,0.00030669343],"genre_scores_gemma":[0.00026144506,0.99508667,0.00017172344,0.000043524615,0.0004870907,0.00090424344,0.00036579664,0.000060380746,0.0026191068],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9981408,0.00022685947,0.0003576197,0.0006978416,0.00016510888,0.00041175634],"domain_scores_gemma":[0.9992749,0.000017603426,0.00003343635,0.00049619254,0.00005350505,0.00012435312],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00025633397,0.0003578918,0.00063033245,0.00012025735,0.00006643154,0.000035817913,0.00024264632,0.0004701818,0.00012501748],"category_scores_gemma":[0.000060925995,0.00028831168,0.00016648952,0.00019280893,0.000086140164,0.0000026478554,0.00023930403,0.000296882,0.000031946507],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000013639472,0.00005503784,0.0000077922805,0.0024434475,0.0000709238,0.000013392185,0.0000061705186,0.0000039506003,0.056064624,0.00000241105,0.0012297399,0.94008887],"study_design_scores_gemma":[0.00016608957,0.00010935828,0.0000058187566,0.0006003791,0.000011893728,0.00005001088,0.0000036897106,0.000011626784,0.026608035,0.000005658491,0.9721308,0.0002966666],"about_ca_topic_score_codex":0.000026079568,"about_ca_topic_score_gemma":0.00007402248,"teacher_disagreement_score":0.970901,"about_ca_system_score_codex":0.00005739613,"about_ca_system_score_gemma":0.00027391806,"threshold_uncertainty_score":0.9999569},"labels":[],"label_agreement":null},{"id":"W2004155024","doi":"10.1016/j.gene.2014.04.012","title":"Identification of active VQ motif-containing genes and the expression patterns under low nitrogen treatment in soybean","year":2014,"lang":"en","type":"article","venue":"Gene","topic":"Legume Nitrogen Fixing Symbiosis","field":"Agricultural and Biological Sciences","cited_by":56,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Saint Mary's University","funders":"Chinese Academy of Agricultural Sciences; National Natural Science Foundation of China","keywords":"Biology; Gene; Genetics; Arabidopsis; Gene expression; Gene family; Mutant","score_opus":0.012677036991118674,"score_gpt":0.215588104508805,"score_spread":0.20291106751768634,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2004155024","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9992254,0.00012816921,0.00001947944,0.00035958976,0.000032317163,0.0001754412,0.000019069099,0.000012445541,0.000028101178],"genre_scores_gemma":[0.9997648,0.000021356258,0.00002437775,0.00005089706,0.00006806466,0.000024036412,0.000023447828,9.5122147e-7,0.000022055436],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99930406,0.00014016028,0.00016665032,0.00017702144,0.00009260145,0.00011949945],"domain_scores_gemma":[0.9996457,0.00013596605,0.00010500667,0.00006308422,0.00002353149,0.000026682983],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00019499441,0.00008273815,0.00012846502,0.000009950359,0.00008364316,0.000022985092,0.00010393668,0.000044592853,0.000024446605],"category_scores_gemma":[0.000017190343,0.00002654907,0.000045785604,0.00007389608,0.000047372854,0.000054832584,0.000039616258,0.000030167072,0.0000040397917],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00004368161,0.00003572482,0.024396159,0.0000020828809,0.00001084941,1.9843151e-7,0.00038796526,0.0000022269073,0.93589824,0.000050817587,0.0000014301482,0.03917064],"study_design_scores_gemma":[0.00037607955,0.00006842554,0.117671266,0.000010933327,0.000011353441,0.0000013654635,0.000508327,0.00008299718,0.88011545,0.0010886461,0.000009700738,0.000055446708],"about_ca_topic_score_codex":0.000562336,"about_ca_topic_score_gemma":0.0003464155,"teacher_disagreement_score":0.09327511,"about_ca_system_score_codex":0.000027196913,"about_ca_system_score_gemma":0.0000026437237,"threshold_uncertainty_score":0.10826397},"labels":[],"label_agreement":null},{"id":"W2004430959","doi":"10.1016/j.gene.2007.03.012","title":"Calmodulin-dependent cyclic nucleotide phosphodiesterase (PDE1) splice variants from bovine cardiac muscle","year":2007,"lang":"en","type":"article","venue":"Gene","topic":"Phosphodiesterase function and regulation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":4,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Plant Biotechnology Institute; Saskatchewan Cancer Agency; University of Saskatchewan","funders":"","keywords":"Biology; Complementary DNA; Alternative splicing; Cloning (programming); Cyclic nucleotide phosphodiesterase; splice; Peptide sequence; Gene isoform; Isozyme; Molecular biology; Phosphodiesterase; Biochemistry; Genetics; Gene; Enzyme","score_opus":0.007485163370881016,"score_gpt":0.22857030780261056,"score_spread":0.22108514443172955,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2004430959","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9874053,0.0016881776,0.007529158,0.00013575087,0.0014953046,0.0002206562,0.00012886159,0.000046771736,0.0013500096],"genre_scores_gemma":[0.99323404,0.00030969735,0.0017416955,0.0007666744,0.0010149966,0.000012352545,0.0006852745,0.000042759923,0.0021925285],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9984799,0.000051389827,0.00032776184,0.0005410878,0.0002178606,0.00038198006],"domain_scores_gemma":[0.99899393,0.00002326945,0.00011285028,0.0005811859,0.0000881508,0.00020061324],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00031292078,0.00023317116,0.00020952038,0.000044575412,0.00014566287,0.000028353135,0.00016422065,0.000199736,0.0001366569],"category_scores_gemma":[0.000047655547,0.00022754278,0.00013931283,0.000099622695,0.000054051736,0.000009187855,0.00013411819,0.000107619504,0.00013524944],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00025820636,0.00009064919,0.0033425917,0.000005317493,0.000089469715,0.00002101302,0.00009986908,0.00007612547,0.9824368,0.000009839663,0.0023432572,0.01122687],"study_design_scores_gemma":[0.0008490268,0.00014108201,0.1307892,0.000010097095,0.00004678704,0.0000074988616,0.0000921801,0.00005770069,0.7900454,0.000050272036,0.077581614,0.00032916505],"about_ca_topic_score_codex":0.00038423866,"about_ca_topic_score_gemma":0.00019016948,"teacher_disagreement_score":0.19239143,"about_ca_system_score_codex":0.000043869484,"about_ca_system_score_gemma":0.000043850705,"threshold_uncertainty_score":0.9278925},"labels":[],"label_agreement":null},{"id":"W2004827338","doi":"10.1016/j.gene.2014.08.013","title":"Characterization of dihydroflavonol 4-reductase (DFR) genes and their association with cold and freezing stress in Brassica rapa","year":2014,"lang":"en","type":"article","venue":"Gene","topic":"Plant Gene Expression Analysis","field":"Biochemistry, Genetics and Molecular Biology","cited_by":121,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Rural Development Administration; Korea Forest Service; Ministry of Agriculture, Food and Rural Affairs; Ministry of Oceans and Fisheries; Ontario Ministry of Agriculture, Food and Rural Affairs","keywords":"Brassica rapa; Anthocyanin; Biology; Brassica; Gene; Abiotic stress; Flavonoid; Abiotic component; Botany; Flavonoid biosynthesis; Cold stress; Genetics; Gene expression; Biochemistry; Transcriptome; Ecology","score_opus":0.0033795577340937676,"score_gpt":0.1849476584468256,"score_spread":0.18156810071273183,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2004827338","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.998826,0.00017244343,0.0006835195,0.000110886445,0.000015661672,0.00007123054,0.00006423881,0.000003907008,0.000052105264],"genre_scores_gemma":[0.999056,0.0003043161,0.00011039789,0.00007348426,0.00005910536,0.000007513648,0.00026282747,0.00000875447,0.00011761194],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99945533,0.00006725,0.00012492095,0.00019417598,0.000057106176,0.00010122645],"domain_scores_gemma":[0.99965024,0.00001350891,0.00013240938,0.00012972603,0.0000362229,0.000037914415],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012358403,0.000089542744,0.00013872648,0.000050902854,0.000029017207,0.000014618177,0.00004945969,0.000082543935,0.0000022414588],"category_scores_gemma":[0.000028970104,0.00007053477,0.000015901724,0.00006249779,0.00002203808,0.0000067234605,0.000045477835,0.000032305805,2.1536255e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00002503599,0.000021860544,0.018282259,0.000012023737,0.000035174337,2.9479787e-7,0.000045795863,0.00002564547,0.98059285,0.000005580481,0.000057284098,0.0008961851],"study_design_scores_gemma":[0.00034935054,0.00005746335,0.00046005647,0.000017545462,0.000014809691,0.0000017462285,0.000027503533,0.0005232859,0.99717873,0.0000056364065,0.0012763288,0.00008754367],"about_ca_topic_score_codex":0.000012997161,"about_ca_topic_score_gemma":0.00006186829,"teacher_disagreement_score":0.017822202,"about_ca_system_score_codex":0.000007152029,"about_ca_system_score_gemma":0.000012292518,"threshold_uncertainty_score":0.28763244},"labels":[{"model":"gemma","categories":[],"domain":null,"study_design":"bench_or_experimental","genre":"empirical","about_ca_system":false,"about_ca_topic":false,"confidence":"low"},{"model":"gpt","categories":[],"domain":null,"study_design":"bench_or_experimental","genre":"empirical","about_ca_system":false,"about_ca_topic":false,"confidence":"high"}],"label_agreement":"agree"},{"id":"W2006096434","doi":"10.1016/j.gene.2006.10.002","title":"A novel non-coding DNA family in Caenorhabditis elegans","year":2006,"lang":"en","type":"article","venue":"Gene","topic":"Genetics, Aging, and Longevity in Model Organisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Center for Research Resources; University of British Columbia; Ministry of Education, Culture, Sports, Science and Technology","keywords":"Biology; Caenorhabditis elegans; Genetics; Gene; Enhancer; Genome; Intron; Reporter gene; Transcription (linguistics); Gene expression","score_opus":0.007447856037962907,"score_gpt":0.20512590102817846,"score_spread":0.19767804499021555,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2006096434","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9480011,0.00056375796,0.048767842,0.000114188726,0.00024846743,0.0001435492,0.000033394277,0.000014833087,0.0021128948],"genre_scores_gemma":[0.99279416,0.00012211478,0.004954496,0.00042178668,0.000550023,0.000015712507,0.00015487644,0.000035920068,0.0009509179],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99886733,0.000016995731,0.00023435484,0.00038207782,0.00012853577,0.00037071764],"domain_scores_gemma":[0.9994935,0.0000047594544,0.000055155164,0.00034405233,0.000045226516,0.000057314806],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001272043,0.00017674627,0.00015912787,0.00006492082,0.00006496991,0.00003114613,0.00020811566,0.00015820019,0.000012971699],"category_scores_gemma":[0.000013406278,0.0001972259,0.00007084679,0.00010121954,0.000050145944,0.0000031484171,0.00009115579,0.00009179767,0.000026567583],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00000868915,0.00007985491,0.0024465055,0.000009723719,0.000010091875,0.00000880168,0.00008718784,0.0007856796,0.99425834,0.0000365873,0.0019014488,0.0003670597],"study_design_scores_gemma":[0.00081900845,0.00010222621,0.048704185,0.000009811981,0.000013294695,0.00002944251,0.00005197572,0.00031198387,0.9383109,0.00011956567,0.011209955,0.00031765245],"about_ca_topic_score_codex":0.0009282977,"about_ca_topic_score_gemma":0.000985569,"teacher_disagreement_score":0.05594747,"about_ca_system_score_codex":0.00002438933,"about_ca_system_score_gemma":0.000064236505,"threshold_uncertainty_score":0.8042639},"labels":[],"label_agreement":null},{"id":"W2006238209","doi":"10.1016/j.gene.2014.06.021","title":"Screening and identification of soybean seed-specific genes by using integrated bioinformatics of digital differential display, microarray, and RNA-seq data","year":2014,"lang":"en","type":"article","venue":"Gene","topic":"Soybean genetics and cultivation","field":"Agricultural and Biological Sciences","cited_by":18,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Plant Biotechnology Institute","funders":"National Natural Science Foundation of China","keywords":"Biology; Gene; Arabidopsis; Microarray analysis techniques; Gene expression; Microarray; RNA-Seq; Gene expression profiling; Genetics; Computational biology; Transcriptome","score_opus":0.03643276668326755,"score_gpt":0.22666764441662232,"score_spread":0.19023487773335476,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2006238209","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9930416,0.00028327483,0.0060817436,0.000030304764,0.000037895887,0.000074291485,0.0004317193,0.0000072020866,0.000012005783],"genre_scores_gemma":[0.9979314,0.000083713276,0.0009505527,0.000004605283,0.000043787844,4.9947846e-7,0.00096923346,9.810007e-7,0.000015180049],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9993662,0.000015913152,0.00027629783,0.00015001086,0.0001040258,0.00008751807],"domain_scores_gemma":[0.9996126,0.000033448803,0.00018393388,0.00008342104,0.00005116084,0.00003541957],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00010490779,0.00007987225,0.000116743526,0.000011383704,0.00007071071,0.00008024383,0.00014139159,0.00004512013,0.000007159922],"category_scores_gemma":[0.00001706093,0.000036592348,0.000016221966,0.00010118904,0.00008255159,0.00014444411,0.00011592536,0.000028069284,3.5319138e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000007270388,0.0000150963215,0.0057661035,0.000008162936,0.00000769032,1.8556339e-8,0.000052390395,0.0000016478511,0.8849908,0.000012509557,0.00003818491,0.109100126],"study_design_scores_gemma":[0.0003931658,0.00014674598,0.166092,0.000048509937,0.000042155414,0.0000070027804,0.0010909718,0.062829204,0.7677494,0.0001362467,0.0011914592,0.00027312877],"about_ca_topic_score_codex":0.00004583408,"about_ca_topic_score_gemma":0.000010016108,"teacher_disagreement_score":0.16032588,"about_ca_system_score_codex":0.0000027974747,"about_ca_system_score_gemma":0.000001978579,"threshold_uncertainty_score":0.14921926},"labels":[],"label_agreement":null},{"id":"W2006466840","doi":"10.1016/j.gene.2004.09.007","title":"The top 10 most abundant transcripts are sufficient to characterize the organs functional specificity: evidences from the cortex, hypothalamus and pituitary gland","year":2004,"lang":"en","type":"article","venue":"Gene","topic":"Regulation of Appetite and Obesity","field":"Neuroscience","cited_by":44,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval; Wilfrid Laurier University","funders":"Genome Canada; Université Laval","keywords":"Biology; Hypothalamus; Internal medicine; Endocrinology; Pituitary gland; Hormone","score_opus":0.039284692066735495,"score_gpt":0.2234002801098149,"score_spread":0.18411558804307943,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2006466840","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97690105,0.00041677087,0.00025009312,0.021249993,0.0005863399,0.00032371408,0.00012372372,0.000029770945,0.00011852375],"genre_scores_gemma":[0.9955128,0.00030683153,0.000023898318,0.0030733424,0.0003991069,0.000011980748,0.000009574483,0.000010353193,0.0006521461],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9986729,0.00008911806,0.00019714533,0.00036368662,0.0004405178,0.00023664505],"domain_scores_gemma":[0.99898106,0.0004214944,0.000078468154,0.0003826266,0.000056076406,0.00008029104],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00023485711,0.00014324959,0.000116603944,0.000018569257,0.0010728945,0.00025020298,0.0003692415,0.000037719543,0.00019298939],"category_scores_gemma":[0.00013759425,0.00006859314,0.000045257955,0.00028077533,0.00025698618,0.000106426276,0.00006713905,0.00012819642,0.0000934037],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003040066,0.00014679058,0.014824067,0.0000051336183,0.000023139724,0.000031175532,0.0030532405,0.00047224734,0.9724468,0.0011657987,0.0020092707,0.005518359],"study_design_scores_gemma":[0.0002636739,0.00005709979,0.85879105,0.00001938842,0.000014213336,0.000017817423,0.0003575724,0.00002760122,0.09603561,0.0005580646,0.04374878,0.00010911034],"about_ca_topic_score_codex":0.00011633306,"about_ca_topic_score_gemma":0.00030778925,"teacher_disagreement_score":0.87641114,"about_ca_system_score_codex":0.000029035727,"about_ca_system_score_gemma":0.00007417779,"threshold_uncertainty_score":0.8251946},"labels":[],"label_agreement":null},{"id":"W2006534695","doi":"10.1016/j.gene.2005.10.033","title":"Characterization of Asxl1, a murine homolog of Additional sex combs, and analysis of the Asx-like gene family","year":2006,"lang":"en","type":"article","venue":"Gene","topic":"RNA Research and Splicing","field":"Biochemistry, Genetics and Molecular Biology","cited_by":101,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Terry Fox Research Institute; University of British Columbia","funders":"Canadian Institutes of Health Research; Medical Research Council Canada","keywords":"Biology; Gene; Molecular biology; Genetics; Homeotic gene; Conserved sequence; Drosophila melanogaster; In situ hybridization; Homology (biology); Peptide sequence; Sequence analysis; Messenger RNA; Gene expression; Cell biology","score_opus":0.005994987025309985,"score_gpt":0.217491890050473,"score_spread":0.21149690302516302,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2006534695","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99762547,0.0001917493,0.0006905676,0.000026609569,0.0000134987395,0.000068328154,0.0012716773,0.0000012211037,0.00011088937],"genre_scores_gemma":[0.9963497,0.000110273446,0.00033539286,0.00003544374,0.0000351659,0.00000573107,0.0024027533,0.0000047189774,0.0007208363],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9994432,0.000039219318,0.00018054325,0.000120654244,0.00012665529,0.00008974111],"domain_scores_gemma":[0.99956125,0.0000097975135,0.000118148266,0.00019329599,0.00009743025,0.000020068464],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00008934585,0.000056180274,0.00014570428,0.00006367972,0.000025065192,0.0000025984389,0.00009106127,0.00005275172,0.000049121434],"category_scores_gemma":[0.000015268346,0.00004394527,0.00008006697,0.00019690559,0.00009436033,0.0000017482936,0.000073836665,0.000026560017,1.9293687e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000024117917,0.000047972502,0.009551154,0.000011828273,0.00016513094,3.787494e-7,0.0000051307165,0.00007939993,0.98939806,0.000015636057,0.00023371405,0.00046747466],"study_design_scores_gemma":[0.0001472579,0.000055805598,0.32430917,0.0000031351046,0.00004730506,0.0000013922908,0.0000041023036,0.0002671051,0.6747053,0.00000839233,0.00042058513,0.000030455383],"about_ca_topic_score_codex":0.00009738463,"about_ca_topic_score_gemma":0.000027114746,"teacher_disagreement_score":0.314758,"about_ca_system_score_codex":0.0000033467852,"about_ca_system_score_gemma":0.00003530507,"threshold_uncertainty_score":0.17920361},"labels":[],"label_agreement":null},{"id":"W2007271403","doi":"10.1016/s0378-1119(01)00485-1","title":"Role of the multifunctional CDP/Cut/Cux homeodomain transcription factor in regulating differentiation, cell growth and development","year":2001,"lang":"en","type":"review","venue":"Gene","topic":"Developmental Biology and Gene Regulation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":235,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"","keywords":"Biology; Transcription factor; Cell biology; Homeobox; Genetics; Histone deacetylase; Histone; Gene; Molecular biology","score_opus":0.014973076502606035,"score_gpt":0.23120276057136396,"score_spread":0.21622968406875792,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2007271403","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.18781917,0.811146,0.0002937771,0.0000075995695,0.00016740407,0.00044449317,0.000036029433,0.0000050646645,0.00008044436],"genre_scores_gemma":[0.13421871,0.8625732,0.0012003826,0.00001653343,0.00010996074,0.00006630825,0.0014012024,0.00002831152,0.00038540896],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9987923,0.00013403082,0.0004584752,0.00033918163,0.00011260108,0.00016343698],"domain_scores_gemma":[0.99952626,0.000013196997,0.0002420735,0.00015428539,0.000032552536,0.000031652347],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00011503651,0.00023085297,0.00035804592,0.00007638822,0.00008758034,0.000007681738,0.00012471438,0.00034036965,0.000016153837],"category_scores_gemma":[0.000015411551,0.00017132354,0.000109253095,0.00013238941,0.000053317322,0.0000036028719,0.00007841896,0.00010074593,0.000002247205],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00003027546,0.00010198864,0.006403546,0.0014990602,0.00013282482,3.389964e-7,0.0001789525,0.000008310597,0.2539466,0.00001350987,0.000025424877,0.73765916],"study_design_scores_gemma":[0.0012962354,0.00009201357,0.11682059,0.0012280658,0.00015772486,0.000057692192,0.00008182761,0.000012159628,0.38809916,0.00012574272,0.49114636,0.0008824393],"about_ca_topic_score_codex":0.0000055101414,"about_ca_topic_score_gemma":0.000052199626,"teacher_disagreement_score":0.7367767,"about_ca_system_score_codex":0.000035181496,"about_ca_system_score_gemma":0.00015438707,"threshold_uncertainty_score":0.6986371},"labels":[],"label_agreement":null},{"id":"W2007511193","doi":"10.1016/j.gene.2005.05.028","title":"Evolutionary plasticity of methionine biosynthesis","year":2005,"lang":"en","type":"article","venue":"Gene","topic":"Enzyme Structure and Function","field":"Materials Science","cited_by":64,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University","funders":"","keywords":"Biology; Methionine; Gene; Methionine synthase; Gene duplication; Methylation; Horizontal gene transfer; Function (biology); Homoserine; Genetics; Phylogenetics; Computational biology; Amino acid","score_opus":0.010319416485461317,"score_gpt":0.22014240888861883,"score_spread":0.20982299240315752,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2007511193","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9923871,0.00015965273,0.0049387203,0.00021489101,0.00023350255,0.00003347985,0.000024690702,0.000035094396,0.0019728483],"genre_scores_gemma":[0.97283393,0.00000821617,0.026627917,0.00006473461,0.0002579632,0.000001914049,0.0000025291288,0.0000036960641,0.00019912337],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9995582,0.000021783888,0.00011458906,0.00010303593,0.00011296631,0.00008941036],"domain_scores_gemma":[0.999759,0.000044900604,0.00004510612,0.000088189845,0.00003830795,0.000024487266],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00008581792,0.000046846017,0.00007899952,0.000032412136,0.00004179938,0.000003636338,0.00006454507,0.000037215817,0.0016472],"category_scores_gemma":[0.000059134858,0.000038371134,0.00002556292,0.00006692439,0.000038782782,0.000064577594,0.000021580789,0.000025377884,0.00016144206],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000013788601,0.000012389858,0.0001248187,0.0000043506775,0.0000027593392,1.7859246e-7,0.000030738414,0.0003920802,0.99622154,0.00038203585,0.0014901153,0.0013252314],"study_design_scores_gemma":[0.00007297976,0.000024755034,0.0066087656,0.0000034075053,0.000011054539,0.00000516259,0.000006570656,0.00015667529,0.98856515,0.00023021111,0.0042719706,0.000043274988],"about_ca_topic_score_codex":0.000018825513,"about_ca_topic_score_gemma":0.000009837462,"teacher_disagreement_score":0.021689197,"about_ca_system_score_codex":0.000017732615,"about_ca_system_score_gemma":0.000017691687,"threshold_uncertainty_score":0.99926543},"labels":[],"label_agreement":null},{"id":"W2007654956","doi":"10.1016/s0378-1119(99)00557-0","title":"Stable shuttle vectors for Neisseria gonorrhoeae, Haemophilus spp. and other bacteria based on a single origin of replication","year":2000,"lang":"en","type":"article","venue":"Gene","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":34,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Ottawa","funders":"","keywords":"Neisseria gonorrhoeae; Haemophilus ducreyi; Shuttle vector; Biology; Haemophilus influenzae; Plasmid; Microbiology; Escherichia coli; Haemophilus; Vector (molecular biology); Bacteria; Virology; Gene; Genetics; Recombinant DNA; Pasteurellaceae; Antibiotics","score_opus":0.024825596960317612,"score_gpt":0.2579227490692132,"score_spread":0.2330971521088956,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2007654956","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9983028,0.00015119804,0.00010182351,0.00010179011,0.0003216646,0.00022919883,0.0001336826,0.000031709616,0.0006261384],"genre_scores_gemma":[0.9974457,0.000013587191,0.00037199195,0.00008950053,0.00006247892,0.000038819766,0.00012338761,0.000016438471,0.0018380992],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99945945,0.000033251254,0.00015576616,0.00021071068,0.0000033667052,0.00013748545],"domain_scores_gemma":[0.9995721,0.0000411347,0.000059169237,0.0002874487,0.000027884229,0.000012239701],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00009359756,0.0000914228,0.00015253654,0.000045549164,0.000078441015,0.000010952844,0.000048966725,0.00010214575,0.0030871884],"category_scores_gemma":[0.000015710517,0.00008112434,0.000036800968,0.000063741456,0.000029147339,0.000036022426,0.000006621922,0.000035366178,0.00007242244],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00038221842,0.00012042753,0.0011672726,0.00001212681,0.00002460031,1.5184414e-8,0.00002439809,0.000017694672,0.9908068,0.00009033312,0.0008861753,0.0064678923],"study_design_scores_gemma":[0.0009911092,0.00043000001,0.010425067,0.0000128561405,0.000022948443,0.000007300621,0.0000052653527,0.000033355584,0.5917853,0.00006284917,0.39612308,0.00010083326],"about_ca_topic_score_codex":0.00020243021,"about_ca_topic_score_gemma":0.000029243609,"teacher_disagreement_score":0.3990215,"about_ca_system_score_codex":0.000016166117,"about_ca_system_score_gemma":0.00002013089,"threshold_uncertainty_score":0.99782413},"labels":[],"label_agreement":null},{"id":"W2008156561","doi":"10.1016/s0378-1119(01)00758-2","title":"The SMN genes are subject to transcriptional regulation during cellular differentiation","year":2001,"lang":"en","type":"article","venue":"Gene","topic":"Neurogenetic and Muscular Disorders Research","field":"Medicine","cited_by":42,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Centre Hospitalier Universitaire Sainte-Justine","funders":"","keywords":"SMN1; Biology; Spinal muscular atrophy; Exon; Promoter; Gene; Motor neuron; Genetics; Transcription factor; Transcription (linguistics); SMA*; Molecular biology; Cell biology; Gene expression; Neuroscience","score_opus":0.02110104603334637,"score_gpt":0.25953440475682166,"score_spread":0.2384333587234753,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2008156561","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.989536,0.0018335636,0.0059511247,0.0019461678,0.000101601865,0.00037705718,0.000002298428,0.000027701808,0.00022451383],"genre_scores_gemma":[0.9959629,0.0006183975,0.00012574652,0.000093142415,0.00019588902,0.000037058788,0.00003088564,0.00001602195,0.0029199473],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99910855,0.000042545096,0.00012600674,0.00017558089,0.00033978213,0.00020755976],"domain_scores_gemma":[0.9995763,0.000013123175,0.00002333567,0.00021611802,0.00007781215,0.000093327755],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000094953684,0.00007695492,0.00008679587,0.000062894454,0.00021653544,0.000024204026,0.00006371673,0.000035930505,0.00011853494],"category_scores_gemma":[0.000021266631,0.000056632773,0.00007436864,0.00016547104,0.00002249363,0.000020254922,0.00001687697,0.00006427808,0.000052725074],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001536838,0.000051834773,0.018172631,0.000017382448,0.000028207016,0.000012548421,0.00006707281,0.00007364276,0.9730341,0.00005558116,0.00009267089,0.008240637],"study_design_scores_gemma":[0.0007930129,0.000052025203,0.7084246,0.00001238667,0.000026665,0.0000299394,0.00005435027,0.00024461775,0.28032097,0.00009986397,0.009876601,0.00006496294],"about_ca_topic_score_codex":0.00000925217,"about_ca_topic_score_gemma":0.000032197502,"teacher_disagreement_score":0.69271314,"about_ca_system_score_codex":0.000030422314,"about_ca_system_score_gemma":0.000026449698,"threshold_uncertainty_score":0.23094174},"labels":[],"label_agreement":null},{"id":"W2008447930","doi":"10.1016/j.gene.2004.06.048","title":"Lateral gene transfer and the complex distribution of insertions in eukaryotic enolase","year":2004,"lang":"en","type":"article","venue":"Gene","topic":"Protist diversity and phylogeny","field":"Biochemistry, Genetics and Molecular Biology","cited_by":26,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia; Canadian Institute for Advanced Research","funders":"","keywords":"Biology; Enolase; Gene; Horizontal gene transfer; Genetics; Phylogenetics; Gene conversion; Homologous chromosome; Homologous recombination; Molecular evolution; Gene duplication; Conserved sequence; Concerted evolution; Evolutionary biology; Genome; Peptide sequence","score_opus":0.011633530614067874,"score_gpt":0.20801140986738925,"score_spread":0.19637787925332137,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2008447930","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99673164,0.000313209,0.0023615009,0.00028349337,0.000021010828,0.000119711316,0.0001313579,0.0000019864594,0.00003606445],"genre_scores_gemma":[0.9992809,0.0001244614,0.00011510171,0.00012473052,0.000022917922,0.000004534753,0.0003101531,0.000002542389,0.000014644054],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9996686,0.00003012955,0.000083397565,0.000096880576,0.0000373425,0.00008363124],"domain_scores_gemma":[0.99984556,0.0000032066318,0.000010550102,0.000101957485,0.000017297836,0.00002140836],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00007130901,0.00004972868,0.00006870347,0.000010040251,0.000045848807,0.0000044612884,0.00006666258,0.000045714685,0.00000549866],"category_scores_gemma":[0.000007830227,0.00003991666,0.00003163886,0.00004445904,0.00011105889,0.0000016495677,0.00003278569,0.00003416882,0.0000017760518],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00028809364,0.00007600963,0.021541568,0.00001336819,0.000030595795,0.0000041768103,0.0002166668,0.00045515515,0.97600424,0.0010694745,0.000032493383,0.00026815067],"study_design_scores_gemma":[0.002628823,0.000086764,0.43370768,0.0000045847023,0.000016313674,0.000014988366,0.000013533145,0.000022259528,0.5623699,0.0008438491,0.00021948868,0.00007184804],"about_ca_topic_score_codex":0.00012258222,"about_ca_topic_score_gemma":0.00008657652,"teacher_disagreement_score":0.4136344,"about_ca_system_score_codex":0.000007079099,"about_ca_system_score_gemma":0.00002022686,"threshold_uncertainty_score":0.16277541},"labels":[],"label_agreement":null},{"id":"W2009072879","doi":"10.1016/s0378-1119(02)00759-x","title":"Two-dimensional display and whole genome comparison of bacterial pathogen genomes of high G+C DNA content","year":2002,"lang":"en","type":"article","venue":"Gene","topic":"Genomics and Phylogenetic Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":11,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"BC Children's Hospital; BC Cancer Agency; University of British Columbia","funders":"","keywords":"Biology; Genome; Bordetella pertussis; Bacterial genome size; Genetics; Mycobacterium tuberculosis; GC-content; Computational biology; Bacteria; Gene; Tuberculosis","score_opus":0.023291644909484207,"score_gpt":0.229457915160116,"score_spread":0.20616627025063178,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2009072879","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9886583,0.010487005,0.000019306824,0.00004182698,0.00013899621,0.000118412056,0.00043877342,0.00000123689,0.00009616305],"genre_scores_gemma":[0.9978477,0.0002830738,0.001372773,0.000032334257,0.0001511336,0.000006617602,0.00015085317,0.000012658864,0.00014290506],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9992277,0.000027828688,0.00027767627,0.00022517091,0.000089377354,0.00015226995],"domain_scores_gemma":[0.99951905,0.000009713948,0.00013074982,0.00021023606,0.000077174904,0.000053067495],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00006773713,0.00012562961,0.00027681564,0.000024831596,0.00004288586,0.000004894747,0.00009549425,0.0000614414,0.000044064167],"category_scores_gemma":[0.00000860925,0.00011368967,0.00006195139,0.000029851726,0.00011266979,5.613198e-7,0.00016014498,0.00002742175,0.0000031044958],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000048871447,0.00007813143,0.0037306312,0.000013887354,0.00010473157,5.8856756e-7,0.00017149422,0.00017803628,0.9943746,0.00002790508,0.00010363054,0.0011675196],"study_design_scores_gemma":[0.0014517913,0.0006146729,0.061093073,0.000006716039,0.00006417927,0.000010311115,0.00011320004,0.000097956814,0.9282537,0.000051597646,0.008010099,0.00023269313],"about_ca_topic_score_codex":0.000027966282,"about_ca_topic_score_gemma":0.00001927218,"teacher_disagreement_score":0.06612086,"about_ca_system_score_codex":0.0000042906117,"about_ca_system_score_gemma":0.00001091866,"threshold_uncertainty_score":0.463613},"labels":[],"label_agreement":null},{"id":"W2009119062","doi":"10.1016/j.gene.2006.02.006","title":"Identification and characterization of a novel bovine oocyte-specific secreted protein gene","year":2006,"lang":"en","type":"article","venue":"Gene","topic":"Reproductive Biology and Fertility","field":"Medicine","cited_by":13,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Biology; Oocyte; Gene; Germinal vesicle; Molecular biology; Exon; Genetics; Blastocyst; Gene expression; Signal peptide; Messenger RNA; Peptide sequence; Embryo; Embryogenesis","score_opus":0.020930654071949946,"score_gpt":0.24174483578758452,"score_spread":0.22081418171563458,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2009119062","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98954093,0.00029051487,0.00922669,0.00029607656,0.000060429673,0.00047340515,0.000030470766,0.00002470797,0.000056782705],"genre_scores_gemma":[0.9977203,0.00002619225,0.00087673403,0.000017703254,0.00020246654,0.000023631317,0.00041177735,0.000007127224,0.00071403873],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9993385,0.000021812339,0.00023055529,0.00025180553,0.00007402372,0.00008327111],"domain_scores_gemma":[0.99947387,0.0000041940184,0.000108327644,0.0002563483,0.00013307368,0.000024203791],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00018652332,0.000068468915,0.0001430528,0.000047618676,0.00003275445,0.000004016565,0.00002688151,0.00007298089,0.000024335233],"category_scores_gemma":[0.000027439117,0.000059888123,0.000022419354,0.00011013574,0.0000829877,0.000043675864,0.0000147941455,0.000049466886,0.0000044949184],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0011936803,0.00013049354,0.0041382657,0.00003167361,0.0000113873275,9.4352765e-7,0.000029540819,2.2786551e-7,0.993191,0.000056573175,0.00001006153,0.0012061723],"study_design_scores_gemma":[0.0003339871,0.00005035694,0.4877971,0.0000056789145,0.000008490243,0.000008307522,0.000001746902,0.000053189473,0.5113296,0.000027395436,0.00035684777,0.000027306627],"about_ca_topic_score_codex":0.000013586019,"about_ca_topic_score_gemma":0.0000010493551,"teacher_disagreement_score":0.48365885,"about_ca_system_score_codex":0.000017756825,"about_ca_system_score_gemma":0.000019166384,"threshold_uncertainty_score":0.24421668},"labels":[],"label_agreement":null},{"id":"W2009476325","doi":"10.1016/s0378-1119(03)00457-8","title":"Gerbil interleukin-18 and caspase-1: cloning, expression and characterization","year":2003,"lang":"en","type":"article","venue":"Gene","topic":"Toxin Mechanisms and Immunotoxins","field":"Immunology and Microbiology","cited_by":4,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"McGill University","keywords":"Biology; Gerbil; Cloning (programming); Molecular cloning; Interleukin 1β; Caspase 1; Molecular biology; Computational biology; Genetics; Cell biology; Interleukin; Gene expression; Apoptosis; Gene; Cytokine; Internal medicine; Programmed cell death","score_opus":0.011214234291328744,"score_gpt":0.2164627517388267,"score_spread":0.20524851744749795,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2009476325","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9948746,0.0025501344,0.0015047868,0.000033725388,0.00046757035,0.000110314395,0.000015232418,0.00003407918,0.00040956313],"genre_scores_gemma":[0.9954147,0.0004440751,0.00047676556,0.00016621638,0.00001604692,0.000009756843,0.00007364003,0.000013082199,0.0033857285],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99938554,0.00008451349,0.00013362503,0.0002077068,0.000014271418,0.00017434967],"domain_scores_gemma":[0.999748,0.00001642666,0.000058581038,0.00014097228,0.000017723542,0.000018303363],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000101031976,0.00010834488,0.00013193522,0.000045906992,0.00014705014,0.000020335749,0.00004369464,0.00014023086,0.00056325743],"category_scores_gemma":[0.000025972191,0.00009430439,0.000017242404,0.000034897756,0.000057987025,0.00007757704,0.000046355195,0.00010729173,0.000048671736],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000024821167,0.00001924156,0.00027028716,0.0000057375505,0.000013869697,0.0000024604392,0.00033523058,7.7426826e-8,0.9953291,0.00058440125,0.00012701127,0.0032877838],"study_design_scores_gemma":[0.0006419471,0.000104927385,0.003324469,0.00002050988,0.000010279579,0.00012293123,0.000084834144,0.0000017890774,0.9404238,0.00009852803,0.055051334,0.0001146765],"about_ca_topic_score_codex":0.000009187561,"about_ca_topic_score_gemma":0.0000017723399,"teacher_disagreement_score":0.054924324,"about_ca_system_score_codex":0.000009181602,"about_ca_system_score_gemma":0.000012322148,"threshold_uncertainty_score":0.6167274},"labels":[],"label_agreement":null},{"id":"W2011257997","doi":"10.1016/j.gene.2012.02.010","title":"Three novel BRCA1/BRCA2 mutations in breast/ovarian cancer families in Croatia","year":2012,"lang":"en","type":"article","venue":"Gene","topic":"BRCA gene mutations in cancer","field":"Biochemistry, Genetics and Molecular Biology","cited_by":13,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Terry Fox Foundation","keywords":"Biology; Haplotype; Genetics; Mutation; Breast cancer; Founder effect; BRCA2 Protein; Gene; Ovarian cancer; Cancer; Point mutation; Genotype; Germline mutation","score_opus":0.017323396422415812,"score_gpt":0.2774205807369644,"score_spread":0.2600971843145486,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2011257997","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9900647,0.0026571776,0.0049996516,0.0006949984,0.00043147348,0.00020338749,0.00014761776,0.00001074001,0.00079027127],"genre_scores_gemma":[0.993613,0.00015688482,0.004994818,0.00033152816,0.00039483068,0.00019133992,0.00014130698,0.000027339036,0.00014896994],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9990178,0.000021327594,0.00022965293,0.00026912324,0.00010567986,0.00035646523],"domain_scores_gemma":[0.9995087,0.0000104720375,0.00005426793,0.00030728139,0.000055012348,0.0000643128],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00017279081,0.00014042517,0.00012176483,0.00011598029,0.000045372533,0.000013861713,0.00016369166,0.00013927472,0.000101638645],"category_scores_gemma":[0.000026205715,0.00015188399,0.000042114098,0.00028554501,0.00006773918,0.000010558484,0.00008123483,0.00009895948,0.000020833153],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000372391,0.00018242814,0.2200746,0.000013193509,0.000045491255,0.0000016451783,0.0006366184,0.0035718232,0.7629831,0.00020108893,0.0011247727,0.011128026],"study_design_scores_gemma":[0.0014456086,0.000025159008,0.82375026,0.00001964506,0.000019413263,0.00003982143,0.00025847214,0.00029201302,0.16482379,0.00019768569,0.008789112,0.00033903017],"about_ca_topic_score_codex":0.0014846259,"about_ca_topic_score_gemma":0.007814585,"teacher_disagreement_score":0.60367566,"about_ca_system_score_codex":0.00013714525,"about_ca_system_score_gemma":0.00023214248,"threshold_uncertainty_score":0.6193649},"labels":[],"label_agreement":null},{"id":"W2011775348","doi":"10.1016/s0378-1119(01)00591-1","title":"A novel copper-regulated promoter system for expression of heterologous proteins in Schizosaccharomyces pombe","year":2001,"lang":"en","type":"article","venue":"Gene","topic":"Fungal and yeast genetics research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":36,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Sherbrooke","funders":"National Institutes of Health; Medical Research Council Canada","keywords":"Schizosaccharomyces pombe; Biology; Heterologous expression; Heterologous; Gene; Gene expression; Origin of replication; Selectable marker; Regulation of gene expression; Yeast; Molecular biology; Cell biology; Genetics; Plasmid; Saccharomyces cerevisiae; Recombinant DNA","score_opus":0.018077950009357826,"score_gpt":0.26508995847202516,"score_spread":0.24701200846266733,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2011775348","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9965164,0.0004665487,0.0019181654,0.00008003553,0.000065134176,0.00075671077,0.000060130686,0.00000977525,0.00012707584],"genre_scores_gemma":[0.9955258,0.000028821658,0.0037150998,0.00001865427,0.00010594873,0.00016601656,0.00010228598,0.000021094274,0.00031632325],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.999006,0.000036018777,0.00022764146,0.00030602407,0.00013807934,0.00028625454],"domain_scores_gemma":[0.99947923,0.000006119909,0.00006395038,0.00028226426,0.000105422536,0.00006299097],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00016935708,0.00012306173,0.0001641091,0.000068148736,0.000037543017,0.00001066864,0.00019087114,0.00016186498,0.0000065998456],"category_scores_gemma":[0.000029225845,0.00010346679,0.000068504494,0.000100065176,0.00004330349,0.0000024472572,0.00011480792,0.000058064106,0.0000034979214],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00050754106,0.00013156765,0.001138981,0.00010267797,0.000014431087,0.0000031855225,0.00003087971,0.00015384988,0.99697196,0.000004475247,0.0000762713,0.000864187],"study_design_scores_gemma":[0.001231654,0.00056470896,0.0012332936,0.000063436695,0.000004145036,0.000040678387,0.000024828018,0.00034804895,0.9952792,0.000008798468,0.001088615,0.00011258288],"about_ca_topic_score_codex":0.000028637294,"about_ca_topic_score_gemma":0.000031514617,"teacher_disagreement_score":0.0017969345,"about_ca_system_score_codex":0.000013547277,"about_ca_system_score_gemma":0.00005178931,"threshold_uncertainty_score":0.4219253},"labels":[],"label_agreement":null},{"id":"W2012451037","doi":"10.1016/s0378-1119(02)00473-0","title":"Characterization and in silico mapping of a novel murine zinc finger transcription factor","year":2002,"lang":"en","type":"article","venue":"Gene","topic":"RNA Research and Splicing","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"Core Research for Evolutional Science and Technology","keywords":"Biology; Zinc finger; Zinc finger transcription factor; Transcription factor; Gene; Genetics; Complementary DNA; In silico; Neural tube; Molecular biology; Embryo","score_opus":0.02918936499319525,"score_gpt":0.24191530797716895,"score_spread":0.2127259429839737,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2012451037","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9953152,0.00023648892,0.00421411,0.000087223205,0.000016859367,0.000076734126,0.000016333212,0.0000022746635,0.000034793462],"genre_scores_gemma":[0.99857163,0.00033849105,0.00030239648,0.000039750874,0.000041320105,0.00000502037,0.000048352897,0.00000544701,0.0006475725],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99962395,0.000010333139,0.00009750468,0.00011474722,0.000051350282,0.00010210884],"domain_scores_gemma":[0.99985224,0.0000019227557,0.00002266939,0.000076933466,0.000018574017,0.000027636546],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000043241438,0.0000462106,0.0000614361,0.00004264771,0.000014795452,0.0000058135556,0.00003361766,0.00004500396,0.00002284574],"category_scores_gemma":[0.000015921489,0.000045668294,0.000016566806,0.00005289225,0.000015796008,0.000003256081,0.000015640175,0.000029703813,8.6053285e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000014839379,0.00003857868,0.0025600218,0.000018104045,0.000005012933,5.1259786e-7,0.00007885954,0.000005413709,0.99174833,0.0000016004653,0.0000053420695,0.0055234088],"study_design_scores_gemma":[0.0005148449,0.000059094506,0.06617654,0.000011945252,0.000001057818,0.0000034674035,0.000011277197,0.0019700169,0.93003404,6.412452e-7,0.0011618269,0.000055245437],"about_ca_topic_score_codex":0.0000140653265,"about_ca_topic_score_gemma":0.000017275343,"teacher_disagreement_score":0.06361652,"about_ca_system_score_codex":0.0000042345746,"about_ca_system_score_gemma":0.0000043799105,"threshold_uncertainty_score":0.1862299},"labels":[],"label_agreement":null},{"id":"W2012738107","doi":"10.1016/s0378-1119(01)00771-5","title":"Gene structure and expression of the mouse adipocyte enhancer-binding protein","year":2001,"lang":"en","type":"article","venue":"Gene","topic":"Signaling Pathways in Disease","field":"Biochemistry, Genetics and Molecular Biology","cited_by":49,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University","funders":"Canadian Diabetes Association; Natural Sciences and Engineering Research Council of Canada; Heart and Stroke Foundation of Canada","keywords":"Biology; Gene isoform; Alternative splicing; Molecular biology; Exon; Gene expression; Gene; Precursor mRNA; Regulation of gene expression; RNA splicing; Genetics; RNA","score_opus":0.008613074989115658,"score_gpt":0.22796947641027665,"score_spread":0.219356401421161,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2012738107","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9983139,0.001156336,0.00015169149,0.000024260695,0.00005630621,0.00018560236,0.000056136218,0.0000064368064,0.000049334652],"genre_scores_gemma":[0.99783117,0.000040433748,0.001142893,0.000030142615,0.00012815066,0.000012393183,0.00003197523,0.000014997032,0.00076784636],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9994205,0.000038260117,0.00010794362,0.00020418061,0.00009963149,0.00012945742],"domain_scores_gemma":[0.9995016,0.0000025363308,0.000072316914,0.0003423967,0.00003199002,0.000049198392],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000050937153,0.00009274654,0.00007437258,0.000011468845,0.00006242879,0.000007870794,0.00015749327,0.00008969408,0.00003461608],"category_scores_gemma":[0.00004561143,0.00006780512,0.000040633106,0.000051658422,0.000057455833,0.0000017400417,0.00014008724,0.00004943927,9.772268e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00005481608,0.000012728664,0.00084292114,0.000011621295,0.000010660383,0.0000014121855,0.00002508513,0.000039969163,0.9983131,0.0000018679116,0.00020582147,0.00047997982],"study_design_scores_gemma":[0.00026892356,0.00003951142,0.00022914486,0.000015420348,0.000010310582,0.000009797207,0.000007942458,0.000004775898,0.9983864,0.00003805727,0.00090544985,0.000084268235],"about_ca_topic_score_codex":0.0000036501997,"about_ca_topic_score_gemma":0.0000021663798,"teacher_disagreement_score":0.0011159023,"about_ca_system_score_codex":0.0000066528064,"about_ca_system_score_gemma":0.00003382082,"threshold_uncertainty_score":0.27650124},"labels":[],"label_agreement":null},{"id":"W2012795308","doi":"10.1016/j.gene.2009.06.009","title":"Identification and characterisation of a novel antisense non-coding RNA from the RBM5 gene locus","year":2009,"lang":"en","type":"article","venue":"Gene","topic":"RNA Research and Splicing","field":"Biochemistry, Genetics and Molecular Biology","cited_by":41,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Ottawa; Laurentian University; Sudbury Regional Hospital","funders":"Cancer Care Ontario","keywords":"Biology; Intron; Molecular biology; Antisense RNA; Gene; RNA; Rapid amplification of cDNA ends; Complementary DNA; Coding region; Genetics; Molecular cloning","score_opus":0.01472659160597651,"score_gpt":0.2637005553846573,"score_spread":0.2489739637786808,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2012795308","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98502463,0.00036403656,0.014037663,0.00036997342,0.0000361845,0.00010661651,0.000030092306,0.0000027662093,0.000028049384],"genre_scores_gemma":[0.9985469,0.0004601591,0.00043155075,0.00012508298,0.000165788,0.0000027779804,0.00010928568,0.0000050400886,0.00015340939],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9994963,0.000016949034,0.00013035003,0.0001595964,0.00008913955,0.00010767051],"domain_scores_gemma":[0.99962777,0.000008178585,0.00006854455,0.00021236682,0.00005005232,0.000033077387],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015422692,0.000057777816,0.00006730636,0.000016565133,0.000061437866,0.000024383085,0.00008287484,0.00004829163,0.000002910913],"category_scores_gemma":[0.000041704905,0.00004560401,0.000026197293,0.00004473848,0.000028225542,0.0000040997857,0.000029095527,0.00003668347,0.0000019004681],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000031767642,0.000020483023,0.00034794456,0.000002174013,0.000012526985,6.854411e-7,0.000053048476,0.000005939376,0.98902726,0.0000055255114,0.00009395958,0.010398697],"study_design_scores_gemma":[0.00027958158,0.00005329969,0.07567164,0.0000063142525,0.000006439113,0.000004162621,0.000020814687,0.00068598776,0.92310774,0.000015627262,0.000100109355,0.000048292826],"about_ca_topic_score_codex":0.00005786727,"about_ca_topic_score_gemma":0.000007722136,"teacher_disagreement_score":0.0753237,"about_ca_system_score_codex":0.000004605686,"about_ca_system_score_gemma":0.000018363593,"threshold_uncertainty_score":0.18596776},"labels":[],"label_agreement":null},{"id":"W2012990462","doi":"10.1016/j.gene.2012.12.036","title":"Differential expression of genes and changes in glucose metabolism in the liver of liver-specific glucokinase gene knockout mice","year":2013,"lang":"en","type":"article","venue":"Gene","topic":"Pancreatic function and diabetes","field":"Medicine","cited_by":13,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Glucokinase; Biology; Endocrinology; Internal medicine; Phosphoenolpyruvate carboxykinase; Glucose homeostasis; Glycogen; Knockout mouse; Glycogen phosphorylase; Maturity onset diabetes of the young; Gene expression; Gene; Diabetes mellitus; Type 2 diabetes; Biochemistry; Insulin resistance","score_opus":0.01943395796564413,"score_gpt":0.2244491651292325,"score_spread":0.20501520716358837,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2012990462","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.96756715,0.03170825,0.000027739938,0.00011726463,0.000083771556,0.00035484802,0.00001042513,0.000007066906,0.00012349029],"genre_scores_gemma":[0.99085987,0.008073553,0.0006707049,0.00011240331,0.00012743652,0.00004364215,0.000016475346,0.000009343588,0.00008657642],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99917126,0.000092713715,0.00022432902,0.00017323515,0.00018185521,0.00015662592],"domain_scores_gemma":[0.9994725,0.00010098024,0.00008640119,0.00022951892,0.00005819592,0.000052376265],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000114489725,0.00011667553,0.00032496292,0.00015911463,0.000018098772,0.000006636995,0.000077579425,0.000072200775,0.0004661498],"category_scores_gemma":[0.000035820245,0.000075654985,0.000039658342,0.00015049674,0.000087803826,0.000045823763,0.000052664604,0.00007840686,0.0000107822425],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009971394,0.00016259968,0.0044774064,0.0000816844,0.000010984987,0.000008552433,0.0012936362,0.00000105585,0.9795136,0.00001942469,0.00021461894,0.014116754],"study_design_scores_gemma":[0.0012424535,0.00007070558,0.24415077,0.000062804706,0.00003306973,0.000006597839,0.00028916667,0.00013234002,0.7534236,0.000020794023,0.0005127326,0.000055003788],"about_ca_topic_score_codex":0.00039993424,"about_ca_topic_score_gemma":0.00003619155,"teacher_disagreement_score":0.23967336,"about_ca_system_score_codex":0.000010220526,"about_ca_system_score_gemma":0.0000148738645,"threshold_uncertainty_score":0.5104013},"labels":[],"label_agreement":null},{"id":"W2013005072","doi":"10.1016/s0378-1119(00)00200-6","title":"Organization and transcription of the division cell wall (dcw) cluster in Neisseria gonorrhoeae","year":2000,"lang":"en","type":"article","venue":"Gene","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":43,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Ottawa","funders":"","keywords":"Biology; Promoter; FtsZ; Genetics; Neisseria gonorrhoeae; Gene; Gene cluster; Escherichia coli; Intergenic region; Terminator (solar); Transcription (linguistics); Primer extension; Molecular biology; Microbiology; Genome; Gene expression; RNA","score_opus":0.004582385121162621,"score_gpt":0.18379056609435554,"score_spread":0.1792081809731929,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2013005072","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99889565,0.00038344116,0.000024135392,0.00015171501,0.00026260593,0.000091221475,0.0000043768346,0.000008621967,0.0001782229],"genre_scores_gemma":[0.9985665,0.00020350989,0.000010311441,0.000040618965,0.0000107472915,0.0000015971051,0.000025346075,0.000005057519,0.0011362989],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9996833,0.000054830693,0.00011233988,0.000079972124,0.000002232761,0.000067286535],"domain_scores_gemma":[0.9998563,0.0000078449875,0.000023835399,0.000087761226,0.000020485526,0.0000037765371],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00004659541,0.000047694768,0.00006948466,0.000023270373,0.000051102226,0.0000048269585,0.0000399165,0.00008231913,0.0011860406],"category_scores_gemma":[0.000004191701,0.00003347977,0.000014508979,0.00011385308,0.000017284712,0.000043591543,0.000010630655,0.000047278714,0.00003639951],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00002095523,0.000039139213,0.009298959,0.000005634782,0.0000036901188,7.3653363e-9,0.00024673095,0.000017093236,0.98607814,0.000015415044,0.00009129331,0.0041829627],"study_design_scores_gemma":[0.00091806933,0.00005332175,0.40867528,0.0000109709445,0.000012546809,0.000010700148,0.000016963646,0.0000075679327,0.5775029,0.0000530984,0.012677707,0.000060894152],"about_ca_topic_score_codex":0.0001264743,"about_ca_topic_score_gemma":0.0000744729,"teacher_disagreement_score":0.40857524,"about_ca_system_score_codex":0.0000073477613,"about_ca_system_score_gemma":0.0000075256057,"threshold_uncertainty_score":0.999727},"labels":[],"label_agreement":null},{"id":"W2013725503","doi":"10.1016/s0378-1119(02)01208-8","title":"Identification of opcA gene in Neisseria polysaccharea : interspecies diversity of Opc protein family","year":2003,"lang":"en","type":"article","venue":"Gene","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":14,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Population and Public Health","funders":"U.S. Food and Drug Administration","keywords":"Biology; Neisseria; Genetics; Gene; Homology (biology); Genome; Molecular biology; Bacteria","score_opus":0.018044245789559862,"score_gpt":0.22907414558214242,"score_spread":0.21102989979258258,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2013725503","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9985611,0.0005750073,0.0001476549,0.000024100096,0.00038562558,0.00015627207,0.00004155358,0.000009822714,0.00009888974],"genre_scores_gemma":[0.99936795,0.000046774487,0.00007043791,0.000004609292,0.000007658799,0.0000072489875,0.000020529915,0.0000039969186,0.00047078324],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9994475,0.00008253789,0.0002453837,0.00011741742,0.000007773629,0.00009934896],"domain_scores_gemma":[0.99962133,0.000009882665,0.00012806816,0.00016462004,0.000069893074,0.000006221273],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014185753,0.000065719454,0.00015793084,0.00010548052,0.00005271995,0.0000032562295,0.00009347788,0.00008895091,0.00024529675],"category_scores_gemma":[0.000037597536,0.00006344341,0.000043505766,0.00014032346,0.00004470065,0.00005786028,0.0000662281,0.000052316,0.000023330373],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000050539926,0.00009809412,0.007586174,0.000010312474,0.000034343648,1.1975958e-7,0.00027414862,0.0000017785245,0.9909633,0.000629111,0.000067841036,0.00028426468],"study_design_scores_gemma":[0.00040460995,0.00005382839,0.10038248,0.00000989859,0.000010013016,0.000003931156,0.00022320592,2.5020682e-7,0.8983024,0.0001214039,0.00043700778,0.000051006],"about_ca_topic_score_codex":0.00051443983,"about_ca_topic_score_gemma":0.000065028275,"teacher_disagreement_score":0.0927963,"about_ca_system_score_codex":0.000018370733,"about_ca_system_score_gemma":0.00001980736,"threshold_uncertainty_score":0.26858273},"labels":[],"label_agreement":null},{"id":"W2013948180","doi":"10.1016/s0378-1119(01)00875-7","title":"Diversity of Streptococcus mutans bacteriocins as confirmed by DNA analysis using specific molecular probes","year":2002,"lang":"en","type":"article","venue":"Gene","topic":"Genomics and Phylogenetic Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":32,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"","keywords":"Biology; Gene; Genetics; DNA; Molecular biology; Open reading frame; Hybridization probe; Genome; Nucleic acid thermodynamics; Streptococcus mutans; Nucleic acid sequence; RNA; Peptide sequence; Bacteria","score_opus":0.016613540811993743,"score_gpt":0.21754243687473843,"score_spread":0.2009288960627447,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2013948180","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99568236,0.0026884752,0.0007719639,0.00002867312,0.00005279979,0.00016497943,0.00012568396,0.000002731441,0.00048234852],"genre_scores_gemma":[0.998491,0.0005998057,0.00057481375,0.000057721274,0.000041741645,0.0000041684743,0.00004867766,0.000011493052,0.00017058602],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9991323,0.000034985904,0.00018543693,0.00032284044,0.00011811787,0.00020632542],"domain_scores_gemma":[0.99938905,0.0000046331375,0.000103927894,0.000334431,0.00010175631,0.00006619339],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000057205172,0.00014823096,0.00023089228,0.00005404044,0.00017715064,0.000009429121,0.00018155017,0.00008749832,0.00013832407],"category_scores_gemma":[0.000010940626,0.0001521696,0.0001630991,0.00021854581,0.00009771086,6.662229e-7,0.00038026067,0.000034631776,0.000004652655],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000011172862,0.000060660965,0.017043244,0.0000058976066,0.00063787505,0.000003978471,0.00023718146,0.00021546581,0.9812463,0.000008210837,0.00019551303,0.0003344842],"study_design_scores_gemma":[0.0003087281,0.00013805529,0.006976748,0.000002311231,0.00024896898,0.0000027126107,0.0001133535,0.0001098509,0.98737746,0.00001946215,0.004514771,0.000187551],"about_ca_topic_score_codex":0.000077890705,"about_ca_topic_score_gemma":0.000018827539,"teacher_disagreement_score":0.010066495,"about_ca_system_score_codex":0.000012035572,"about_ca_system_score_gemma":0.000013396921,"threshold_uncertainty_score":0.6205296},"labels":[],"label_agreement":null},{"id":"W2015257315","doi":"10.1016/j.gene.2014.04.048","title":"Identification and expression of microRNA in the brain of hibernating bats, Myotis lucifugus","year":2014,"lang":"en","type":"article","venue":"Gene","topic":"Bat Biology and Ecology Studies","field":"Agricultural and Biological Sciences","cited_by":45,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Carleton University","funders":"Natural Sciences and Engineering Research Council of Canada; Canada Research Chairs","keywords":"Biology; microRNA; Drosha; Torpor; Myotis lucifugus; Dicer; Deep sequencing; Genetics; Cell biology; RNA; RNA interference; Gene; Genome; Ecology","score_opus":0.01373388117816267,"score_gpt":0.21472024250908797,"score_spread":0.2009863613309253,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2015257315","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.996901,0.00031493654,0.0000022951006,0.0025997867,0.000036204914,0.00004572799,0.0000042271263,0.000002489672,0.00009333883],"genre_scores_gemma":[0.99968594,0.000055816414,0.00007570413,0.00012019905,0.000024111798,0.0000036534714,0.0000050820363,1.2189601e-7,0.000029342753],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99962085,0.00008946972,0.000117783755,0.000082065395,0.000029231833,0.000060586102],"domain_scores_gemma":[0.9995752,0.000294049,0.00007718564,0.00003340393,0.000014545251,0.0000056055483],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00041478878,0.00003121573,0.00007316549,0.000004496777,0.000055448592,0.0000021638918,0.00011297949,0.000043353542,0.000012671975],"category_scores_gemma":[0.00016066486,0.0000098387545,0.000013385661,0.00005622886,0.000072122,0.000016494156,0.000048470516,0.000031775162,0.0000012359791],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000004419336,0.0000133913545,0.060795404,0.0000026080475,0.0000016829471,7.949304e-8,0.00018658298,3.3490318e-7,0.9215488,0.00004400412,0.00025284747,0.017149892],"study_design_scores_gemma":[0.000047450438,0.000047202986,0.79597014,0.000005285995,0.0000018610588,0.000001201949,0.0002210245,0.0000054401407,0.20269895,0.0006472356,0.00033367603,0.000020511445],"about_ca_topic_score_codex":0.00005590745,"about_ca_topic_score_gemma":0.00031896657,"teacher_disagreement_score":0.7351748,"about_ca_system_score_codex":0.0000014749863,"about_ca_system_score_gemma":5.8282717e-7,"threshold_uncertainty_score":0.042647135},"labels":[],"label_agreement":null},{"id":"W2016355380","doi":"10.1016/j.gene.2007.12.024","title":"Characterization of a 1-aminocyclopropane-1-carboxylate synthase gene from loblolly pine (Pinus taeda L.)","year":2008,"lang":"en","type":"article","venue":"Gene","topic":"Plant biochemistry and biosynthesis","field":"Biochemistry, Genetics and Molecular Biology","cited_by":14,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Petroleum Technology Alliance Canada","keywords":"Gymnosperm; ATP synthase; Biology; Loblolly pine; Gene; Biochemistry; Biosynthesis; Amino acid; Botany; Pinus <genus>","score_opus":0.010514408001860445,"score_gpt":0.1936533702654882,"score_spread":0.18313896226362775,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2016355380","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9971902,0.00046182246,0.00061324885,0.000059698556,0.0001233595,0.00013111012,0.0010961926,0.000020738957,0.0003036641],"genre_scores_gemma":[0.9940642,0.0008520486,0.0009564696,0.0001293654,0.00044490647,0.00001275407,0.0028431404,0.00002271863,0.0006743563],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99881554,0.000040302173,0.00030709174,0.00042591867,0.0001643068,0.0002468436],"domain_scores_gemma":[0.9991778,0.0000092865575,0.00017894621,0.00044775358,0.000082825245,0.000103383405],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00007267918,0.00021595354,0.00024309849,0.000033471075,0.00007775217,0.000007635343,0.00023233378,0.00022735773,0.00007016264],"category_scores_gemma":[0.00005514215,0.00020744158,0.000111082125,0.00010217186,0.00010270593,0.0000047762605,0.000095804455,0.00006409574,0.000019322617],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00020726192,0.00010511879,0.00096318254,0.000015423668,0.00009268564,0.00004796351,0.00002227723,0.0000033824729,0.9974905,7.537566e-7,0.0001074807,0.0009439272],"study_design_scores_gemma":[0.00041604403,0.00009986025,0.007717266,0.000016738864,0.000037445247,0.00011526222,0.000003855383,0.000034830548,0.9858881,0.0000047365884,0.0054178815,0.00024793955],"about_ca_topic_score_codex":0.00004543074,"about_ca_topic_score_gemma":0.0000047030417,"teacher_disagreement_score":0.011602403,"about_ca_system_score_codex":0.000010832506,"about_ca_system_score_gemma":0.00007967854,"threshold_uncertainty_score":0.84592223},"labels":[],"label_agreement":null},{"id":"W2017359248","doi":"10.1016/j.gene.2013.09.103","title":"Molecular evolution and nucleotide diversity of nuclear plastid phosphoglycerate kinase (PGK) gene in Triticeae (Poaceae)","year":2013,"lang":"en","type":"article","venue":"Gene","topic":"Chromosomal and Genetic Variations","field":"Agricultural and Biological Sciences","cited_by":13,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Saint Mary's University","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Triticeae; Biology; Polyploid; Ploidy; Genetics; Genome; Aegilops; Nucleotide diversity; Genetic diversity; Elymus; Phylogenetic tree; Gene; Botany; Poaceae; Haplotype; Genotype; Population","score_opus":0.008247701156063634,"score_gpt":0.1708620494090764,"score_spread":0.16261434825301277,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2017359248","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9986748,0.00023512414,0.0000067790033,0.00055411947,0.000045835575,0.00016970455,0.000036611364,0.000017263477,0.00025977887],"genre_scores_gemma":[0.9993625,0.00005028662,0.0004161173,0.000088598325,0.00003543296,0.000004215145,0.000016008189,8.23146e-7,0.000026006775],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99935406,0.000037187245,0.0001429387,0.00019107093,0.00011148563,0.00016322327],"domain_scores_gemma":[0.99974716,0.00003337533,0.000047565285,0.000043113363,0.00005241077,0.000076351396],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000061177045,0.000084144216,0.00011903471,0.000012698108,0.00013469945,0.000020543182,0.000104477745,0.000057765745,0.0003823181],"category_scores_gemma":[0.000022380098,0.00004206208,0.000038207796,0.0001958355,0.00004763008,0.00007596739,0.0001808672,0.000051450792,0.000040504066],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000014710786,0.000072186165,0.01257916,0.0000038883786,0.000006839853,0.000004465296,0.00007714678,0.000040355095,0.98448145,0.00020403258,0.00004737161,0.0024683948],"study_design_scores_gemma":[0.00034113435,0.00015660358,0.94889987,0.000009824823,0.0000134124275,0.000004533914,0.0001169144,0.0006160997,0.048266273,0.0011876938,0.000264044,0.00012359927],"about_ca_topic_score_codex":0.0022218565,"about_ca_topic_score_gemma":0.00027881245,"teacher_disagreement_score":0.9363207,"about_ca_system_score_codex":0.000022728587,"about_ca_system_score_gemma":0.0000046410514,"threshold_uncertainty_score":0.4186115},"labels":[],"label_agreement":null},{"id":"W2019371877","doi":"10.1016/s0378-1119(01)00762-4","title":"Characterization of the adenosine deaminase-related growth factor (ADGF) gene family in Drosophila","year":2001,"lang":"en","type":"article","venue":"Gene","topic":"Vector-Borne Animal Diseases","field":"Agricultural and Biological Sciences","cited_by":35,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"Biology; Gene; Gene duplication; Genetics; Gene family; Functional divergence; Drosophila (subgenus); Drosophila melanogaster; Pair-rule gene; Genome; Gene expression; Regulator gene","score_opus":0.018818642119837997,"score_gpt":0.20082563630829287,"score_spread":0.18200699418845487,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2019371877","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9985142,0.00023664953,7.972832e-7,0.0007075789,0.00007872664,0.00018197413,0.00013885461,0.000028581024,0.00011267985],"genre_scores_gemma":[0.9991844,0.00022033049,0.000007683598,0.00022980552,0.00009692094,0.000008266542,0.0001207742,0.0000013887241,0.00013040779],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9991785,0.000063433705,0.0002197421,0.00019277121,0.00016272918,0.00018281447],"domain_scores_gemma":[0.99970627,0.00002568931,0.000099721205,0.000059459326,0.000057836183,0.00005104072],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000044919027,0.00010756994,0.00013226106,0.000012859034,0.000063299165,0.00001545067,0.00022579887,0.00007410559,0.00020181984],"category_scores_gemma":[0.000035992627,0.000038831466,0.00007392651,0.0005662999,0.000042376094,0.00008973246,0.000062817744,0.000059819675,0.00002382201],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000019854204,0.00008330128,0.08382885,0.000002275022,0.0000048760007,0.000004527097,0.000024856576,0.0000011309455,0.91427416,0.000039507908,0.000015796926,0.0017008471],"study_design_scores_gemma":[0.00009611243,0.00007015443,0.81673604,0.000009931325,0.000006299076,0.0000029551636,0.00001142207,0.000017285727,0.18262896,0.00008496789,0.00025754617,0.000078313475],"about_ca_topic_score_codex":0.00024185037,"about_ca_topic_score_gemma":0.00011764488,"teacher_disagreement_score":0.7329072,"about_ca_system_score_codex":0.000021644557,"about_ca_system_score_gemma":0.000008858414,"threshold_uncertainty_score":0.22097857},"labels":[],"label_agreement":null},{"id":"W2019716266","doi":"10.1016/j.gene.2005.09.026","title":"Clast4, the murine homologue of human eIF4E-Transporter, is highly expressed in developing oocytes and post-translationally modified at meiotic maturation","year":2005,"lang":"en","type":"article","venue":"Gene","topic":"Reproductive Biology and Fertility","field":"Medicine","cited_by":33,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"Natural Sciences and Engineering Research Council of Canada; Associazione Italiana per la Ricerca sul Cancro; Ministero dell’Istruzione, dell’Università e della Ricerca","keywords":"Biology; EIF4E; Oocyte; Translation (biology); Translational regulation; Cell biology; Protein biosynthesis; Gene; Genetics; Meiosis; Messenger RNA; Repressor; Germline; Embryo; Gene expression","score_opus":0.025926090839400128,"score_gpt":0.27251552582586275,"score_spread":0.24658943498646263,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2019716266","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99092877,0.0010429632,0.00026280398,0.0072695166,0.00003653394,0.0002980787,0.000020499076,0.000014623544,0.00012621167],"genre_scores_gemma":[0.9976727,0.00008057684,0.0013487042,0.00047349627,0.000089143796,0.000011671634,0.00012867451,0.0000064384776,0.0001886328],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99921906,0.0000463751,0.00027786015,0.00024629818,0.00009139662,0.00011903497],"domain_scores_gemma":[0.9995677,0.000038827497,0.000062431136,0.00021508493,0.000091782276,0.000024167224],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002140879,0.000096143805,0.00018694317,0.000054104446,0.0000725282,0.0000026481844,0.0000548124,0.0000919299,0.000036332538],"category_scores_gemma":[0.000020665253,0.00006696756,0.000032895146,0.000073449744,0.00013539255,0.000055860706,0.000014483915,0.00009560589,0.0000028788372],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.001534714,0.00007332091,0.021645077,0.00006002714,0.000042950916,0.000005177008,0.0014934589,0.000038248905,0.97357446,0.00018296602,0.000034530283,0.0013150491],"study_design_scores_gemma":[0.00062004913,0.000060622737,0.70517194,0.000018955361,0.000020647576,0.000012566535,0.000017112721,0.00005173254,0.29357484,0.00020561508,0.00019671167,0.00004918189],"about_ca_topic_score_codex":0.00004369524,"about_ca_topic_score_gemma":0.0001569564,"teacher_disagreement_score":0.6835269,"about_ca_system_score_codex":0.00003493158,"about_ca_system_score_gemma":0.000040244995,"threshold_uncertainty_score":0.27308577},"labels":[],"label_agreement":null},{"id":"W2019781558","doi":"10.1016/j.gene.2008.05.009","title":"DNA demethylation induced by the methyl-CpG-binding domain protein MBD3","year":2008,"lang":"en","type":"article","venue":"Gene","topic":"Epigenetics and DNA Methylation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":40,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"","keywords":"DNA methylation; Biology; DNA demethylation; Promoter; Methylated DNA immunoprecipitation; Methylation; Molecular biology; Epigenetics of physical exercise; CpG site; Demethylation; Repressor; Epigenomics; DNA binding site; Bisulfite sequencing; Genetics; DNA; Gene expression; Gene","score_opus":0.021126841284598435,"score_gpt":0.2513310348602687,"score_spread":0.23020419357567026,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2019781558","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9888162,0.001750932,0.007781857,0.00029081025,0.00011745713,0.00035699556,0.000015972577,0.000015602325,0.00085417205],"genre_scores_gemma":[0.99596035,0.00015099571,0.0024526871,0.00009768149,0.00026986393,0.00008984538,0.00019536332,0.000027852171,0.0007553661],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99884266,0.00016251927,0.00022850095,0.00031544553,0.00020141815,0.00024948557],"domain_scores_gemma":[0.99935234,0.000015602336,0.00011626344,0.0003770998,0.0000702146,0.000068494526],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00044538942,0.000154811,0.00011472719,0.000036290567,0.00029346862,0.000020425683,0.00018896922,0.00018228935,0.000031712047],"category_scores_gemma":[0.000086259046,0.00012320199,0.00007854578,0.00014788534,0.000057228135,0.0000043816804,0.00007957924,0.00010836642,0.000025850062],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000018693245,0.00002297397,0.00039619204,0.0000030100005,0.000028090106,0.0000010478985,0.000081413215,0.000016972592,0.9951744,0.00004543511,0.00038375845,0.0038279907],"study_design_scores_gemma":[0.00032646145,0.00013328604,0.0012154124,0.0000030724814,0.000009207102,0.000004154134,0.000029488863,0.000022303324,0.9725487,0.0004986721,0.02504351,0.00016568047],"about_ca_topic_score_codex":0.00002860205,"about_ca_topic_score_gemma":0.000012892911,"teacher_disagreement_score":0.024659751,"about_ca_system_score_codex":0.000019320783,"about_ca_system_score_gemma":0.000057943013,"threshold_uncertainty_score":0.5024031},"labels":[],"label_agreement":null},{"id":"W2020206364","doi":"10.1016/j.gene.2009.04.007","title":"Activation of antioxidant defense during dehydration stress in the African clawed frog","year":2009,"lang":"en","type":"article","venue":"Gene","topic":"Genomics, phytochemicals, and oxidative stress","field":"Biochemistry, Genetics and Molecular Biology","cited_by":72,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Carleton University","funders":"Natural Sciences and Engineering Research Council of Canada; Canada Research Chairs","keywords":"Biology; Xenopus; Dehydration; Antioxidant; Oxidative stress; Glutathione; Transcription factor; African clawed frog; Gene expression; Internal medicine; Biochemistry; Endocrinology; Gene; Molecular biology; Enzyme","score_opus":0.008696876428733409,"score_gpt":0.22946126281032037,"score_spread":0.22076438638158696,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2020206364","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99834925,0.00014879224,0.00056921015,0.00016627728,0.000023172473,0.00014642849,0.000016367625,0.0000035039216,0.00057702337],"genre_scores_gemma":[0.99915934,0.0000663923,0.00041628737,0.00010272249,0.0001279154,0.000007427871,0.00009173343,0.0000056173317,0.000022593042],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99937725,0.00005352407,0.00017118582,0.00017944591,0.00008447664,0.00013409748],"domain_scores_gemma":[0.9996065,0.000007731554,0.00009091812,0.00023072252,0.00004406374,0.000020055404],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009107451,0.000086403576,0.000092744835,0.000032137872,0.000036603473,0.000009560874,0.0001381787,0.00006688922,0.0000035104479],"category_scores_gemma":[0.000040361516,0.00007184061,0.000044664142,0.00008001365,0.0000329437,0.000003894146,0.0000203505,0.000055092238,9.979775e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007981796,0.00007193929,0.0016484753,0.0000067675323,0.000007997045,7.6442115e-7,0.00024434505,0.00020248335,0.9971001,0.000039471797,0.000030859024,0.00056695787],"study_design_scores_gemma":[0.00033190614,0.00007697978,0.07983844,0.000009014974,0.0000049637206,0.000001915249,0.00021005001,0.00001759101,0.9191119,0.00021163218,0.00010959748,0.00007602551],"about_ca_topic_score_codex":0.00001639043,"about_ca_topic_score_gemma":0.000025357675,"teacher_disagreement_score":0.07818996,"about_ca_system_score_codex":0.000010906779,"about_ca_system_score_gemma":0.000018919169,"threshold_uncertainty_score":0.2929575},"labels":[],"label_agreement":null},{"id":"W2022098603","doi":"10.1016/s0378-1119(02)00694-7","title":"Cloning, genomic organization and expression pattern of a novel Drosophila gene, the disco-interacting protein 2 ( dip2 ), and its murine homolog","year":2002,"lang":"en","type":"article","venue":"Gene","topic":"RNA Research and Splicing","field":"Biochemistry, Genetics and Molecular Biology","cited_by":50,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University; McMaster University","funders":"Natural Sciences and Engineering Research Council of Canada; National Institutes of Health; Hospital for Sick Children","keywords":"Biology; Complementary DNA; Gene; Locus (genetics); Genetics; Cloning (programming); Molecular biology; genomic DNA; Gene expression; Caenorhabditis elegans; Sequence analysis","score_opus":0.01381580360479768,"score_gpt":0.23834989516478103,"score_spread":0.22453409155998336,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2022098603","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99669766,0.0015859884,0.0012737146,0.00017345263,0.000020356114,0.0002025894,0.000012323119,0.0000042027873,0.00002971825],"genre_scores_gemma":[0.99853784,0.00036917758,0.00035100337,0.000041290765,0.00012036362,0.00001071035,0.000027768905,0.000016442187,0.000525384],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99941736,0.00002993905,0.00012663289,0.00020490457,0.00007334338,0.00014782704],"domain_scores_gemma":[0.999664,0.000009823534,0.000072770854,0.00015679903,0.00004945326,0.000047144444],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009177907,0.00008594905,0.000082970226,0.000022224734,0.00010754283,0.000023758403,0.00009338424,0.000053454194,0.000017032486],"category_scores_gemma":[0.0000885969,0.000062161824,0.000015655556,0.000047854788,0.000036930567,0.000005398307,0.00020902242,0.00006618459,0.0000012755252],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000010349724,0.000029147672,0.0021309287,0.000019388592,0.000012388084,0.000001965655,0.00010979571,0.000017016842,0.9965255,0.0000028242102,0.00003396682,0.0011067197],"study_design_scores_gemma":[0.0004019389,0.00010620183,0.0031096754,0.000023498615,0.0000048802294,0.000052745447,0.000029819223,0.0015693984,0.99450177,0.0000024309936,0.00012256966,0.00007505716],"about_ca_topic_score_codex":0.0000187057,"about_ca_topic_score_gemma":0.0000063270486,"teacher_disagreement_score":0.0020237241,"about_ca_system_score_codex":0.0000049978958,"about_ca_system_score_gemma":0.000008197653,"threshold_uncertainty_score":0.25348857},"labels":[],"label_agreement":null},{"id":"W2023603756","doi":"10.1016/j.gene.2012.06.053","title":"Identification of candidate SNPs for drug induced toxicity from differentially expressed genes in associated tissues","year":2012,"lang":"en","type":"review","venue":"Gene","topic":"Drug Transport and Resistance Mechanisms","field":"Medicine","cited_by":17,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Cancerfonden; Vetenskapsrådet; Swedish Cancer Foundation; European Commission; Université Laval","keywords":"Biology; Single-nucleotide polymorphism; In silico; Candidate gene; Carboplatin; Gene; Paclitaxel; SNP; Genetics; Computational biology; Bioinformatics; Genotype; Cancer; Cisplatin","score_opus":0.04996405822556625,"score_gpt":0.31929912671983207,"score_spread":0.2693350684942658,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2023603756","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.08875627,0.90756226,0.00045147384,0.00001865811,0.00063148845,0.0014994856,0.0010280977,0.000036473306,0.000015823513],"genre_scores_gemma":[0.04120539,0.9523153,0.00028317273,0.0000084487965,0.00029193773,0.00025123445,0.0046415357,0.000070656475,0.00093234127],"study_design_codex":"design_other","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9979718,0.00009013927,0.0009766903,0.00037603264,0.0002819831,0.00030339728],"domain_scores_gemma":[0.9986533,0.000072821436,0.000648179,0.00042298486,0.00010399358,0.00009875167],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00035536895,0.00032128269,0.001746614,0.00018970906,0.000041056603,0.000013291207,0.0002016217,0.00037092375,0.000072063856],"category_scores_gemma":[0.000031555555,0.0002574628,0.00035578964,0.0001974281,0.000024660914,0.000046712445,0.000022420407,0.00017699784,0.000008967687],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013340214,0.00079340866,0.00019016735,0.015844079,0.0008568043,0.000014381605,0.0007999115,3.4216427e-7,0.33130923,0.000033369295,0.00010625283,0.6499186],"study_design_scores_gemma":[0.0040360955,0.000119083285,0.0030111107,0.020479206,0.010015337,0.0000027091285,0.000102993625,0.000018842527,0.68530774,0.0004552517,0.2752268,0.0012248415],"about_ca_topic_score_codex":0.0002012095,"about_ca_topic_score_gemma":0.00069970044,"teacher_disagreement_score":0.6486938,"about_ca_system_score_codex":0.00011214688,"about_ca_system_score_gemma":0.00018031173,"threshold_uncertainty_score":0.9999878},"labels":[],"label_agreement":null},{"id":"W2024553366","doi":"10.1016/j.gene.2004.12.049","title":"Alternative oxidase and plastoquinol terminal oxidase in marine prokaryotes of the Sargasso Sea","year":2005,"lang":"en","type":"article","venue":"Gene","topic":"Microbial Community Ecology and Physiology","field":"Environmental Science","cited_by":83,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; The Scarborough Hospital","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Biology; Alternative oxidase; Sargasso sea; Synechococcus; Prochlorococcus; Electron transport chain; Cyanobacteria; Gene; Biochemistry; Oceanography; Genetics; Bacteria","score_opus":0.007127990523629367,"score_gpt":0.211929139885301,"score_spread":0.20480114936167162,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2024553366","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99819696,0.00001334715,0.0000032960202,0.00029689915,0.000028675466,0.00011976658,0.000010517902,0.000003612625,0.0013269497],"genre_scores_gemma":[0.9990431,0.00001172989,0.000401345,0.00028477501,0.000019777064,0.0000049187356,0.000005087455,0.0000032463586,0.00022601627],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9994988,0.00011588911,0.00010571489,0.00010691316,0.000042151583,0.00013057134],"domain_scores_gemma":[0.9997111,0.000049671744,0.000051056526,0.00016125597,0.0000026891505,0.000024219125],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.000107164626,0.00006514846,0.000091738424,0.000014812243,0.00006423964,0.0000023954042,0.00019072345,0.0000417112,0.0012311032],"category_scores_gemma":[0.000020109435,0.00004831456,0.000018142095,0.000067755565,0.00024368,0.000053093278,0.0004854859,0.00013429149,0.000040175757],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000071445975,0.00017691642,0.24055913,0.0000064987257,0.000008279076,0.000005227143,0.0006930328,0.000586219,0.74689174,0.00004912973,0.000504758,0.010447622],"study_design_scores_gemma":[0.00043123285,0.000090644775,0.7322535,0.0000061746496,0.0000051163943,0.000025605643,0.000017636723,0.00029600732,0.26428238,0.00090016745,0.0016083905,0.00008314481],"about_ca_topic_score_codex":0.0006495971,"about_ca_topic_score_gemma":0.005571126,"teacher_disagreement_score":0.49169436,"about_ca_system_score_codex":0.000035288667,"about_ca_system_score_gemma":0.0000058248424,"threshold_uncertainty_score":0.9996819},"labels":[],"label_agreement":null},{"id":"W2026162949","doi":"10.1016/s0378-1119(99)00465-5","title":"Exon/intron structure and alternative transcripts of the CUTL1 gene","year":2000,"lang":"en","type":"article","venue":"Gene","topic":"RNA Research and Splicing","field":"Biochemistry, Genetics and Molecular Biology","cited_by":34,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"","keywords":"Exon; Exon trapping; Biology; Polyadenylation; Exon shuffling; Tandem exon duplication; Genetics; Intron; RNA splicing; Alternative splicing; Gene; Exonic splicing enhancer; Transcription (linguistics); Splice site mutation; RNA","score_opus":0.007098616397686253,"score_gpt":0.23515335339598076,"score_spread":0.2280547369982945,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2026162949","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9981372,0.0011832127,0.000089477806,0.00014926698,0.000038320963,0.00009300736,0.00006494629,0.0000018154548,0.00024276572],"genre_scores_gemma":[0.99684274,0.00042933697,0.00024430754,0.00012156551,0.00012061034,0.0000025052464,0.000020020196,0.0000075221487,0.002211396],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99950296,0.000034463275,0.000078858386,0.0001478212,0.0000963213,0.00013955813],"domain_scores_gemma":[0.9997185,0.0000025603147,0.000019388006,0.00019097328,0.000025131549,0.000043485794],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000043008935,0.000066551576,0.000068824076,0.000009675508,0.000047098398,0.0000075357934,0.00013257487,0.000050208168,0.00007907265],"category_scores_gemma":[0.000008550613,0.000045433,0.000038927843,0.000036315687,0.00006929079,0.0000015466072,0.000027793682,0.00005520729,0.000001064626],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00005166686,0.0000069819193,0.0004884197,0.000005077767,0.000025915495,9.651883e-7,0.000050304763,0.000064493346,0.98607737,0.00000814927,0.0002612636,0.012959389],"study_design_scores_gemma":[0.00032735756,0.00008750056,0.004687669,0.0000036247566,0.000005923771,0.0000142032595,0.000010603451,0.00007655397,0.9885939,0.000079426005,0.006061106,0.000052156294],"about_ca_topic_score_codex":0.000048869828,"about_ca_topic_score_gemma":0.00003257868,"teacher_disagreement_score":0.012907232,"about_ca_system_score_codex":0.0000037750979,"about_ca_system_score_gemma":0.00002295471,"threshold_uncertainty_score":0.1852704},"labels":[],"label_agreement":null},{"id":"W2026257628","doi":"10.1016/j.gene.2006.12.014","title":"Structure-based mutation analysis shows the importance of LRP5 β-propeller 1 in modulating Dkk1-mediated inhibition of Wnt signaling","year":2006,"lang":"en","type":"article","venue":"Gene","topic":"Wnt/β-catenin signaling in development and cancer","field":"Biochemistry, Genetics and Molecular Biology","cited_by":49,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Women's Health Research Institute","funders":"","keywords":"DKK1; LRP5; Biology; Wnt signaling pathway; Point mutation; Mutation; Frizzled; LRP6; Genetics; Receptor; Gene; Cell biology","score_opus":0.0073554180918882425,"score_gpt":0.21765194970990628,"score_spread":0.21029653161801803,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2026257628","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99581885,0.00042115172,0.003483599,0.000034958248,0.000037891576,0.00011863402,0.000024936744,0.0000039672345,0.00005599242],"genre_scores_gemma":[0.99735606,0.0000050109275,0.0017523937,0.00005510667,0.00007282793,0.0000101810565,0.0007050539,0.000010034595,0.00003330971],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9991089,0.000046009896,0.00037428483,0.00019087936,0.00015734464,0.00012255971],"domain_scores_gemma":[0.9994697,0.000015846888,0.00024117167,0.00014739818,0.000113074195,0.000012802144],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00021686406,0.00009645298,0.0001514884,0.00008648408,0.000031811,0.000005982922,0.00007741499,0.00008347955,0.00006296833],"category_scores_gemma":[0.000027082913,0.00007600366,0.00007728923,0.00039502705,0.000051969226,0.0000030467784,0.0000213695,0.00004708795,3.4033334e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000032792457,0.000014582479,0.051536277,0.000012063215,0.000051676503,9.710254e-7,0.00003838591,0.12519592,0.8229636,0.0000051406414,0.000031253567,0.00011736847],"study_design_scores_gemma":[0.0003677707,0.000028360266,0.022598926,0.000011979026,0.000054479893,3.7810224e-7,0.000033553304,0.0046374835,0.97201234,0.00014694809,0.000014891688,0.00009287473],"about_ca_topic_score_codex":0.0000867323,"about_ca_topic_score_gemma":0.00029922792,"teacher_disagreement_score":0.14904878,"about_ca_system_score_codex":0.000016345493,"about_ca_system_score_gemma":0.00006187246,"threshold_uncertainty_score":0.3099339},"labels":[],"label_agreement":null},{"id":"W2028324656","doi":"10.1016/j.gene.2005.06.046","title":"Identification and immunogold localization of a novel bromegrass (Bromus inermis Leyss) peroxisome channel protein induced by ABA, cold and drought stresses, and late embryogenesis","year":2005,"lang":"en","type":"article","venue":"Gene","topic":"Adipose Tissue and Metabolism","field":"Medicine","cited_by":16,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"University of Saskatchewan","keywords":"Bromus inermis; Biology; Immunogold labelling; Botany; Cell biology; Poaceae; Ultrastructure","score_opus":0.01532264352945677,"score_gpt":0.2478156106391387,"score_spread":0.23249296710968193,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2028324656","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98147076,0.01619045,0.0011544621,0.00044857888,0.000035935016,0.0005971774,0.000055780674,0.000026479227,0.000020359521],"genre_scores_gemma":[0.9952352,0.0016184164,0.00040725138,0.0001193092,0.00009397338,0.00004503902,0.000076664284,0.000028168914,0.0023759776],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99901325,0.000023993935,0.00031700943,0.00029587487,0.00017731889,0.0001725353],"domain_scores_gemma":[0.99940157,0.000012520597,0.00015340796,0.00021011548,0.000105894316,0.00011651275],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013926886,0.0001606932,0.00031086657,0.00011339823,0.00007230852,0.000024418498,0.000043866614,0.00013195926,0.000009525223],"category_scores_gemma":[0.000037826157,0.00015254336,0.000021365144,0.00019311006,0.000071062335,0.00019833111,0.000045620014,0.00007486759,0.0000018832163],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00005954088,0.00013631234,0.00016245403,0.00014942959,0.000061729574,0.0000015366332,0.00035568158,0.0000073339734,0.9887514,0.00006879208,0.00008349851,0.010162287],"study_design_scores_gemma":[0.0024964234,0.00012926856,0.01381897,0.00011495411,0.0001940364,0.000034090408,0.000090306356,0.0012856146,0.979326,0.000016019134,0.0023135627,0.0001807701],"about_ca_topic_score_codex":0.0002338492,"about_ca_topic_score_gemma":0.000027677865,"teacher_disagreement_score":0.014572035,"about_ca_system_score_codex":0.000017780458,"about_ca_system_score_gemma":0.000032227283,"threshold_uncertainty_score":0.6220538},"labels":[],"label_agreement":null},{"id":"W2028981798","doi":"10.1016/s0378-1119(02)00559-0","title":"The African trypanosome cyclophilin A homologue contains unusual conserved central and N-terminal domains and is developmentally regulated","year":2002,"lang":"en","type":"article","venue":"Gene","topic":"Trypanosoma species research and implications","field":"Medicine","cited_by":23,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Victoria","funders":"","keywords":"Biology; Cypa; Trypanosoma brucei; Trypanosoma; Trypanosoma vivax; Open reading frame; Cyclophilin A; Gene; Molecular biology; Peptide sequence; Mutant; Genetics; Virology","score_opus":0.02418533248478476,"score_gpt":0.2581351232150058,"score_spread":0.23394979073022104,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2028981798","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98251724,0.0016380985,0.000029287687,0.013579156,0.000036259436,0.00044638556,0.000069910326,0.00004316884,0.0016404958],"genre_scores_gemma":[0.9940358,0.0014422294,0.00057913637,0.0006916406,0.00007794021,0.000039016595,0.00003332579,0.000016408585,0.0030845138],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.998672,0.000053306445,0.00025083445,0.00028989514,0.00022146871,0.00051251566],"domain_scores_gemma":[0.9991083,0.000113923335,0.00005196185,0.00027861533,0.00007485635,0.00037232268],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000027946586,0.00015097407,0.00020524421,0.000069250294,0.0004169318,0.00006985674,0.00010791037,0.000081155944,0.00011991785],"category_scores_gemma":[0.00006478227,0.00010892513,0.00003994562,0.0002045081,0.00051938207,0.000052412255,0.00009890316,0.00017298995,0.000017411448],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.001024858,0.00062077056,0.024709344,0.00010366486,0.0006859222,0.0012228085,0.004593343,5.8834434e-7,0.85108656,0.0035076793,0.02768476,0.0847597],"study_design_scores_gemma":[0.002467238,0.00035611974,0.9585621,0.000020317322,0.000039422193,0.001920327,0.00044610875,0.00021217353,0.010702123,0.0002585768,0.024849756,0.00016578626],"about_ca_topic_score_codex":0.0000458535,"about_ca_topic_score_gemma":0.00010128838,"teacher_disagreement_score":0.93385273,"about_ca_system_score_codex":0.00008249805,"about_ca_system_score_gemma":0.00009760179,"threshold_uncertainty_score":0.4441838},"labels":[],"label_agreement":null},{"id":"W2030289839","doi":"10.1016/s0378-1119(02)00403-1","title":"Molecular cloning and characterization of two new isoforms of the protein kinase A catalytic subunit from the human parasite Leishmania","year":2002,"lang":"en","type":"article","venue":"Gene","topic":"Research on Leishmaniasis Studies","field":"Medicine","cited_by":19,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"University of British Columbia; Hebrew University of Jerusalem","keywords":"Biology; Gene isoform; Crithidia fasciculata; Protein subunit; Gene; Peptide sequence; Genetics; Sequence alignment; Conserved sequence; Open reading frame; Molecular biology; Biochemistry; DNA","score_opus":0.030697550979018884,"score_gpt":0.28013122795766904,"score_spread":0.24943367697865015,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2030289839","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9965423,0.0006964318,0.000084276726,0.0016987121,0.000016536684,0.00069630373,0.000020505568,0.000011001826,0.00023392879],"genre_scores_gemma":[0.9988141,0.00007047148,0.00011929623,0.00012659421,0.00007297248,0.000020321364,0.000027268137,0.000016828188,0.000732135],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9990484,0.000056307934,0.00023702993,0.00016267969,0.00032030127,0.00017526555],"domain_scores_gemma":[0.9992397,0.00002457295,0.00014560188,0.00043953452,0.00009281249,0.000057789297],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014984858,0.00010754456,0.00022666065,0.0000386462,0.00011634696,0.000014922,0.00015350002,0.00003246683,0.000057686007],"category_scores_gemma":[0.00010958071,0.000060992483,0.000058045105,0.00020778975,0.00015337653,0.000058772388,0.00013568,0.0001343352,0.0000056689873],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000016236816,0.000043934717,0.029420083,0.000037383597,0.00008164822,0.000007890668,0.0013085839,0.0000016254536,0.9666818,0.00010286025,0.000063913525,0.0022340897],"study_design_scores_gemma":[0.000888708,0.00010553715,0.3369692,0.00014615463,0.00006902453,0.0000063655298,0.00007115677,0.00017135366,0.6611941,0.0001256453,0.00019420646,0.000058570608],"about_ca_topic_score_codex":0.0010211809,"about_ca_topic_score_gemma":0.00007730818,"teacher_disagreement_score":0.30754912,"about_ca_system_score_codex":0.000023603536,"about_ca_system_score_gemma":0.000028166263,"threshold_uncertainty_score":0.24872012},"labels":[],"label_agreement":null},{"id":"W2031825006","doi":"10.1016/s0378-1119(01)00770-3","title":"Identification of a novel family of putative methyltransferases that interact with human and Drosophila presenilins","year":2001,"lang":"en","type":"article","venue":"Gene","topic":"Alzheimer's disease research and treatments","field":"Medicine","cited_by":12,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Hospital for Sick Children","funders":"Canadian Institutes of Health Research; Alzheimer Society","keywords":"Presenilin; Biology; Genetics; Methyltransferase; Gene; RNA splicing; Alternative splicing; Gene family; Phenotype; Gene isoform; Genome; Alzheimer's disease; Disease; RNA; Methylation","score_opus":0.06394026489957325,"score_gpt":0.35688026200231604,"score_spread":0.29293999710274277,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2031825006","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.996451,0.0020860801,0.0006512468,0.00009736455,0.0000067764136,0.0003483735,0.000115963914,0.000008648084,0.00023454023],"genre_scores_gemma":[0.99921465,0.00024558496,0.0003473319,0.000013256456,0.000014713495,0.000020632771,0.0000898576,0.0000105301715,0.000043448254],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9993171,0.000022568642,0.00015825819,0.00015398201,0.00023920588,0.00010888591],"domain_scores_gemma":[0.99950737,0.00004528488,0.00006258921,0.0001574282,0.00012777702,0.00009957461],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000068898036,0.00008071985,0.00018810859,0.00008863006,0.000029645025,0.0000057811326,0.000036124395,0.000022508777,0.000011818217],"category_scores_gemma":[0.00001589155,0.00005823229,0.000038711336,0.0001126474,0.00013187174,0.00007282811,0.000012713179,0.00004571521,0.0000013413924],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00083504815,0.0013236249,0.06046699,0.00010508832,0.0032738128,0.00006269753,0.00067594997,0.000008442116,0.931874,0.00006912532,0.000010145815,0.001295079],"study_design_scores_gemma":[0.0029301615,0.00080500566,0.301449,0.00006961344,0.0004663073,0.000033300657,0.00031798042,0.000105810206,0.6936282,0.000124557,0.000008567869,0.0000615266],"about_ca_topic_score_codex":0.00011572202,"about_ca_topic_score_gemma":0.00000812033,"teacher_disagreement_score":0.24098201,"about_ca_system_score_codex":0.00001274109,"about_ca_system_score_gemma":0.000054052685,"threshold_uncertainty_score":0.23746438},"labels":[],"label_agreement":null},{"id":"W2031965277","doi":"10.1016/j.gene.2012.12.082","title":"De novo 3q22.1 q24 deletion associated with multiple congenital anomalies, growth retardation and intellectual disability","year":2013,"lang":"en","type":"article","venue":"Gene","topic":"Genomic variations and chromosomal abnormalities","field":"Biochemistry, Genetics and Molecular Biology","cited_by":6,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Biomedical Research Council; Hospital for Sick Children; Agency for Science, Technology and Research","keywords":"Biology; Intellectual disability; Growth retardation; Genetics; Pregnancy","score_opus":0.005878544153184984,"score_gpt":0.1782954877013729,"score_spread":0.17241694354818793,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2031965277","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99749595,0.00012245905,0.0017826817,0.00010178259,0.000031326028,0.00017353083,0.00004807242,0.000014389433,0.00022981454],"genre_scores_gemma":[0.9980951,0.000036717764,0.0008537876,0.00008498118,0.000080488724,0.000041068633,0.0005311108,0.000011892802,0.0002648822],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9993791,0.000055156033,0.00012880753,0.00020326894,0.00006163428,0.00017206279],"domain_scores_gemma":[0.9996256,0.000026948366,0.000046201843,0.00013037666,0.00011469629,0.000056141693],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009791744,0.000103635306,0.00008525636,0.000012470005,0.000095186355,0.000046739122,0.000057616584,0.000094055715,0.00009398032],"category_scores_gemma":[0.00019618658,0.00009190598,0.000025112313,0.000046849535,0.00010458202,0.0000094685965,0.000049087404,0.00004530257,0.000008540676],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009826248,0.0001465477,0.44317773,0.000017148375,0.00018818644,0.0000014343416,0.000606276,0.000058560036,0.5536761,0.00010090823,0.00060176896,0.001327052],"study_design_scores_gemma":[0.0015730305,0.00072979333,0.60569507,0.000010216967,0.000073605486,0.0000935582,0.0007180401,0.0010950939,0.388106,0.00027950318,0.0011680404,0.00045806888],"about_ca_topic_score_codex":0.0002527697,"about_ca_topic_score_gemma":0.0002891615,"teacher_disagreement_score":0.16557015,"about_ca_system_score_codex":0.000037548896,"about_ca_system_score_gemma":0.000041379237,"threshold_uncertainty_score":0.37478173},"labels":[],"label_agreement":null},{"id":"W2031974907","doi":"10.1016/j.gene.2005.07.030","title":"Structural organization and chromosomal location of the chicken α-amylase gene family","year":2005,"lang":"en","type":"article","venue":"Gene","topic":"Animal Genetics and Reproduction","field":"Biochemistry, Genetics and Molecular Biology","cited_by":8,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Concordia University; Agriculture and Agri-Food Canada","funders":"","keywords":"Biology; Genetics; Amylase; Gene; Computational biology; Enzyme; Biochemistry","score_opus":0.0052735120794823774,"score_gpt":0.19892172588070908,"score_spread":0.1936482138012267,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2031974907","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9971862,0.0020227267,0.00037260712,0.000143251,0.00011270998,0.000097500444,0.000005382149,0.000004277767,0.000055369852],"genre_scores_gemma":[0.99803644,0.00025352006,0.0007764398,0.0000807465,0.00054507254,0.0000015323412,0.00005186538,0.000011322362,0.00024303723],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99953884,0.00001809441,0.000109999004,0.00018540818,0.00007121551,0.00007643389],"domain_scores_gemma":[0.99956244,0.0000010145159,0.00006147115,0.00020634792,0.00014562655,0.000023070314],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000044000168,0.000067820474,0.000052799394,0.000011290034,0.00006675071,0.000006465906,0.00007325872,0.00006612345,0.0000060101083],"category_scores_gemma":[0.000031561787,0.000050109094,0.000015864734,0.00011968965,0.00006014971,0.0000024270935,0.00007208251,0.000028478991,0.0000019414808],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000008573667,0.000008324663,0.001552914,0.0000065405316,0.000010930606,5.7539367e-8,0.000041977793,0.0007525705,0.9937949,0.000021146458,0.00007310213,0.0037289404],"study_design_scores_gemma":[0.00014930483,0.000056971796,0.12343307,0.0000021386736,0.0000116332785,0.00002192289,0.000015029463,0.00018283394,0.8751228,0.000008489074,0.0009358948,0.000059899896],"about_ca_topic_score_codex":0.000005732141,"about_ca_topic_score_gemma":0.0000058244564,"teacher_disagreement_score":0.12188015,"about_ca_system_score_codex":0.0000060145967,"about_ca_system_score_gemma":0.00004038721,"threshold_uncertainty_score":0.20433895},"labels":[],"label_agreement":null},{"id":"W2032632098","doi":"10.1016/j.gene.2013.11.072","title":"The variant hERG/R148W associated with LQTS is a mutation that reduces current density on co-expression with the WT","year":2013,"lang":"en","type":"article","venue":"Gene","topic":"Cardiac electrophysiology and arrhythmias","field":"Medicine","cited_by":7,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval; Institut Universitaire en Santé Mentale de Québec","funders":"Canadian Institutes of Health Research","keywords":"hERG; Xenopus; Electrophysiology; Long QT syndrome; Biology; Internal medicine; Sudden death; Mutation; QT interval; Endocrinology; Potassium channel; Molecular biology; Genetics; Medicine; Gene","score_opus":0.01195399818868773,"score_gpt":0.24969907601309874,"score_spread":0.237745077824411,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2032632098","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9943729,0.00039238422,0.000063037834,0.0042080665,0.00010570782,0.00046081524,0.0000041487006,0.000046985067,0.00034597557],"genre_scores_gemma":[0.9984567,0.00010850544,0.000029417106,0.000723142,0.00018698678,0.000064212625,0.000038037215,0.000013786859,0.00037919325],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9991045,0.00013077425,0.000083757535,0.00020533695,0.00024779426,0.0002278657],"domain_scores_gemma":[0.9993094,0.00015547304,0.00010751579,0.00026449055,0.00010907524,0.000054040418],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014722125,0.00012946445,0.00016892345,0.000018544175,0.00037656655,0.000026625648,0.000057957874,0.000058932743,0.000028730592],"category_scores_gemma":[0.000034532157,0.000052108364,0.000051655417,0.00010307645,0.000114178525,0.00004262673,0.000015966176,0.00025523908,0.00006330777],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.005876703,0.0007857457,0.0052211992,0.000052059488,0.0016917713,0.00090676453,0.0060864002,0.0005073698,0.7024566,0.00024515673,0.19118975,0.08498052],"study_design_scores_gemma":[0.0025799132,0.0018427832,0.24481168,0.0003600327,0.00030793072,0.00050056836,0.00052613707,0.0004184076,0.74584454,0.0002789702,0.00222227,0.00030673487],"about_ca_topic_score_codex":0.000029767076,"about_ca_topic_score_gemma":0.0000127596995,"teacher_disagreement_score":0.23959048,"about_ca_system_score_codex":0.000046855046,"about_ca_system_score_gemma":0.00007202018,"threshold_uncertainty_score":0.28962836},"labels":[],"label_agreement":null},{"id":"W2032703343","doi":"10.1016/j.gene.2014.08.057","title":"The functional VNTR of IGH enhancer HS1.2 associates with human longevity and interacts with TNFA promoter diplotype in a population of Central Italy","year":2014,"lang":"en","type":"article","venue":"Gene","topic":"Diet and metabolism studies","field":"Medicine","cited_by":6,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Terry Fox Research Institute","funders":"","keywords":"Biology; Longevity; Genetics; Enhancer; Promoter; Population; Evolutionary biology; Gene; Transcription factor; Gene expression; Demography","score_opus":0.009946152366111127,"score_gpt":0.24183963676271872,"score_spread":0.2318934843966076,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2032703343","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99879307,0.00032957052,0.000027253322,0.00017743596,0.0000549906,0.00014751252,0.0000022171232,0.0000054559973,0.0004625126],"genre_scores_gemma":[0.99950016,0.000037027923,0.00010767143,0.000018309893,0.0000751457,0.000007325725,0.000012708706,0.000006904432,0.00023477981],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9994964,0.00002309028,0.00013005077,0.000094533505,0.00014205243,0.000113861446],"domain_scores_gemma":[0.99968934,0.000032413493,0.00009745069,0.00008090299,0.00007564838,0.000024247984],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001366433,0.00006676604,0.00019207702,0.000026753409,0.00003650682,0.0000046562755,0.000018890143,0.000021637228,0.000008085758],"category_scores_gemma":[0.00004360966,0.00003528731,0.000016560474,0.00006255792,0.00006227422,0.00004105696,0.00001743621,0.000053304408,4.493687e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0004900712,0.00011199356,0.97974896,0.000054108223,0.000119635806,7.884388e-7,0.00087760045,0.0000048636775,0.015040798,0.00020277477,0.0000515725,0.0032968228],"study_design_scores_gemma":[0.0008866671,0.0003094,0.98885244,0.000085880456,0.00007396072,0.0000012253658,0.000046114936,0.00001362124,0.00943267,0.00010879991,0.00014814021,0.0000410613],"about_ca_topic_score_codex":0.00010539579,"about_ca_topic_score_gemma":0.0008155321,"teacher_disagreement_score":0.009103488,"about_ca_system_score_codex":0.000013624534,"about_ca_system_score_gemma":0.000013235301,"threshold_uncertainty_score":0.14389749},"labels":[],"label_agreement":null},{"id":"W2033087229","doi":"10.1016/j.gene.2012.04.089","title":"Characterization of the Atlantic salmon (Salmo salar) brain-type fatty acid binding protein (fabp7) genes reveals the fates of teleost fabp7 genes following whole genome duplications","year":2012,"lang":"en","type":"article","venue":"Gene","topic":"RNA Research and Splicing","field":"Biochemistry, Genetics and Molecular Biology","cited_by":13,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Victoria; Simon Fraser University","funders":"Genome British Columbia; Genome Canada","keywords":"Biology; Salmo; Gene; Pike; Rainbow trout; Genetics; Genome; Fugu; Phylogenetic tree; Gene duplication; Grayling; Most recent common ancestor; Evolutionary biology; Zebrafish; Fishery; Fish <Actinopterygii>","score_opus":0.015199465934367527,"score_gpt":0.25880761265214014,"score_spread":0.24360814671777262,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2033087229","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.996303,0.0014741953,0.000765964,0.00058189343,0.00010501857,0.0006736903,0.000055012704,0.000009584897,0.00003160581],"genre_scores_gemma":[0.99768716,0.000200737,0.00041995957,0.00006668277,0.00023605442,0.000054013468,0.00034084235,0.00003058913,0.0009639812],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99864167,0.00015668396,0.0003373362,0.0002383427,0.00023989358,0.00038607084],"domain_scores_gemma":[0.9989081,0.000024694335,0.0002329493,0.0006231987,0.00013363878,0.00007742544],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00052087463,0.0001614471,0.00019832996,0.000055354056,0.00023950844,0.000025728406,0.0004319847,0.00011994447,0.000011703538],"category_scores_gemma":[0.00017415042,0.00010685518,0.00015455342,0.00030717358,0.000091287606,0.00001668862,0.0002238192,0.00009313101,0.00001221526],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000021370544,0.000044713055,0.05096464,0.000042003085,0.00007744204,3.0406252e-7,0.00008472431,0.000010474647,0.9478335,0.000019618943,0.0000166693,0.00088455033],"study_design_scores_gemma":[0.00016158726,0.00006284943,0.06449913,0.000030390154,0.000025891577,0.0000063595917,0.000057101195,0.000019146075,0.93243665,0.0000056701833,0.00257857,0.00011663915],"about_ca_topic_score_codex":0.000047766665,"about_ca_topic_score_gemma":0.00001840977,"teacher_disagreement_score":0.015396827,"about_ca_system_score_codex":0.00001704708,"about_ca_system_score_gemma":0.00007020692,"threshold_uncertainty_score":0.43574277},"labels":[],"label_agreement":null},{"id":"W2033496819","doi":"10.1016/s0378-1119(03)00580-8","title":"A cellular retinoic acid-binding protein from zebrafish (Danio rerio): cDNA sequence, phylogenetic analysis, mRNA expression, and gene linkage mapping","year":2003,"lang":"en","type":"article","venue":"Gene","topic":"Retinoids in leukemia and cellular processes","field":"Biochemistry, Genetics and Molecular Biology","cited_by":22,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University","funders":"","keywords":"Biology; Zebrafish; Molecular biology; Complementary DNA; Danio; Rapid amplification of cDNA ends; Gene; Gene expression; Messenger RNA; Genetics; Molecular cloning","score_opus":0.011651150859220489,"score_gpt":0.21984228538333958,"score_spread":0.20819113452411908,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2033496819","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97820216,0.009946697,0.010602578,0.00002737138,0.0001168777,0.00035772412,0.000059449263,0.000036208286,0.0006509445],"genre_scores_gemma":[0.97839355,0.00063719664,0.018831586,0.00011962045,0.00030588396,0.00008504616,0.0005848945,0.000056578137,0.0009856238],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9973917,0.00025014134,0.00048493626,0.0010448413,0.00028943573,0.0005389182],"domain_scores_gemma":[0.99858457,0.000014097783,0.00025419504,0.0008124032,0.00011680524,0.00021791105],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0003924933,0.00039594414,0.0004154892,0.0001518719,0.00027347385,0.00011027203,0.00036170578,0.00040668252,0.000102246115],"category_scores_gemma":[0.00017108122,0.0003897613,0.00019287696,0.000505498,0.00015415528,0.00001058652,0.0001855425,0.00022425804,0.000016694346],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000021063779,0.00003297099,0.0039923503,0.000044630597,0.00023825442,0.000043181255,0.000102587546,0.000038497354,0.9950964,0.0000103543125,0.00011920955,0.00026054302],"study_design_scores_gemma":[0.0006035564,0.000091232745,0.0002951229,0.00004713963,0.00017263433,0.000020930725,0.00013107246,0.000051276227,0.9913257,0.00018634659,0.006582804,0.0004922089],"about_ca_topic_score_codex":0.000020608133,"about_ca_topic_score_gemma":0.0000063941143,"teacher_disagreement_score":0.0093095,"about_ca_system_score_codex":0.00003816024,"about_ca_system_score_gemma":0.00015495991,"threshold_uncertainty_score":0.9998554},"labels":[],"label_agreement":null},{"id":"W2034883288","doi":"10.1016/j.gene.2006.07.032","title":"Stochastic epigenetic silencing of retrotransposons: Does stability come with age?","year":2006,"lang":"en","type":"review","venue":"Gene","topic":"Chromosomal and Genetic Variations","field":"Agricultural and Biological Sciences","cited_by":20,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"BC Cancer Agency; University of British Columbia","funders":"BC Cancer Agency; Canadian Institutes of Health Research; Multiple Sclerosis Scientific Research Foundation","keywords":"Biology; Retrotransposon; Epigenetics; Transposable element; Genetics; DNA methylation; Gene silencing; Endogenous retrovirus; Phenotype; Germline; Somatic cell; Long terminal repeat; Gene; Genome; Gene expression","score_opus":0.04145722730537992,"score_gpt":0.25013115704046884,"score_spread":0.20867392973508891,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2034883288","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.029717486,0.96834344,0.00006616011,0.000031879517,0.00010515239,0.00076781743,0.00081619486,0.00004050503,0.00011134754],"genre_scores_gemma":[0.043506138,0.9545787,0.0005974213,0.00000985851,0.00039477163,0.00011935727,0.0006320132,0.0000046130253,0.00015713085],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9984093,0.00012165537,0.00051675644,0.0004226283,0.00025017431,0.0002794892],"domain_scores_gemma":[0.99916685,0.00026810804,0.0002683815,0.0001466542,0.00006867074,0.00008134202],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014243508,0.00029308323,0.0009224752,0.000016419588,0.00011443612,0.00002301384,0.00030876344,0.00018198036,0.00035298534],"category_scores_gemma":[0.000020944883,0.00008312952,0.00027456784,0.00043306383,0.00011549658,0.000020881127,0.000043479256,0.00014980754,0.000012379823],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000113422375,0.0002427473,0.00021741484,0.0031847185,0.00013420454,0.00001537366,0.00007803876,0.00007281621,0.006390569,0.000050835155,0.000012493052,0.98958945],"study_design_scores_gemma":[0.0011163366,0.0041112243,0.032960735,0.024054969,0.0065461877,0.00018819231,0.00029490367,0.000059812588,0.0046427427,0.0036790282,0.9172637,0.005082206],"about_ca_topic_score_codex":0.00035779536,"about_ca_topic_score_gemma":0.0020808175,"teacher_disagreement_score":0.98450726,"about_ca_system_score_codex":0.000042778993,"about_ca_system_score_gemma":0.000050037987,"threshold_uncertainty_score":0.3864942},"labels":[],"label_agreement":null},{"id":"W2035280575","doi":"10.1016/j.gene.2009.04.011","title":"The RJL family of small GTPases is an ancient eukaryotic invention probably functionally associated with the flagellar apparatus","year":2009,"lang":"en","type":"article","venue":"Gene","topic":"Protist diversity and phylogeny","field":"Biochemistry, Genetics and Molecular Biology","cited_by":29,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University; Canadian Institute for Advanced Research","funders":"Washington University School of Medicine in St. Louis; Joint Genome Institute; Natural Sciences and Engineering Research Council of Canada; Wellcome Trust","keywords":"Biology; GTPase; Horizontal gene transfer; Phylogenetic tree; Lineage (genetic); Deuterostome; Most recent common ancestor; Gene; Phylogenetics; Gene family; Evolutionary biology; Genetics; Flagellum; Protein family; Genome","score_opus":0.01884779878341491,"score_gpt":0.20459357038454745,"score_spread":0.18574577160113254,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2035280575","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9970932,0.0011169054,0.00061568286,0.0002953967,0.00007170394,0.00023191576,0.00003936768,0.0000068526037,0.00052899506],"genre_scores_gemma":[0.9976019,0.0000827229,0.0001305665,0.0011440848,0.0000651938,0.0000061991427,0.00015641529,0.0000048888405,0.00080799015],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9993486,0.000076058284,0.000096383934,0.00017842875,0.00013919077,0.00016137215],"domain_scores_gemma":[0.9994693,0.000008746107,0.00009364351,0.00025702993,0.00013171848,0.00003957391],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000225603,0.00008994086,0.0000715567,0.000011666004,0.0002316331,0.000022569042,0.00020152508,0.000072126735,0.0000042669644],"category_scores_gemma":[0.000022818545,0.000055166278,0.000055438428,0.00010163475,0.000085635045,0.0000029041964,0.000035654484,0.000054697754,0.0000043262107],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002709698,0.00020042573,0.006783075,0.0000060994407,0.0001440229,0.0000034282034,0.00011745618,0.0004925234,0.98194385,0.00016074008,0.008491499,0.0013858993],"study_design_scores_gemma":[0.0007935576,0.0017684767,0.5815291,0.000016415308,0.000101891565,0.0000081586595,0.00015111966,0.0001130107,0.40684995,0.00063339266,0.0078103417,0.00022464321],"about_ca_topic_score_codex":0.000011445968,"about_ca_topic_score_gemma":0.00007893766,"teacher_disagreement_score":0.5750939,"about_ca_system_score_codex":0.000011262166,"about_ca_system_score_gemma":0.000076677934,"threshold_uncertainty_score":0.22496156},"labels":[],"label_agreement":null},{"id":"W2035852437","doi":"10.1016/s0378-1119(00)00298-5","title":"Characterization of the Class I α-mannosidase gene family in the filamentous fungus Aspergillus nidulans","year":2000,"lang":"en","type":"article","venue":"Gene","topic":"Glycosylation and Glycoproteins Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":27,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Victoria","funders":"","keywords":"Biology; Aspergillus nidulans; Gene; Genetics; Intron; Mannosidase; Homology (biology); Sequence analysis; Molecular biology; Glycoprotein","score_opus":0.010034064482896033,"score_gpt":0.23630282284423249,"score_spread":0.22626875836133645,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2035852437","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99696505,0.00022095886,0.000075280484,0.000420997,0.000051640138,0.0003341539,0.00005859366,0.0000037039372,0.0018696376],"genre_scores_gemma":[0.9965063,0.00024661925,0.00003643051,0.0006755756,0.00010456272,0.000033955846,0.00022461105,0.000010117144,0.0021618519],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9991151,0.00013447636,0.00017476083,0.00018031495,0.00021541576,0.00017991208],"domain_scores_gemma":[0.9994544,0.0000053112603,0.00004385747,0.00042237868,0.000047293488,0.000026793483],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00018507437,0.00008898634,0.0000786663,0.000028060756,0.000068094094,0.000018417597,0.00029560315,0.000084472325,0.00014527694],"category_scores_gemma":[0.000019094616,0.000056282184,0.000060502258,0.00018545323,0.00005451576,0.0000029789267,0.000047180725,0.00008274131,0.000023984248],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000051336578,0.000056468674,0.0005748038,0.000005051852,0.000009351096,0.0000030244707,0.000099085744,0.000117558906,0.9925702,0.000013622171,0.00023534687,0.0062641082],"study_design_scores_gemma":[0.00040518737,0.0000895534,0.08641317,0.000005525057,0.000004527734,0.000009294474,0.000030829164,0.0001537245,0.8618298,0.000012493386,0.0509684,0.00007747861],"about_ca_topic_score_codex":0.000059470534,"about_ca_topic_score_gemma":0.000058398313,"teacher_disagreement_score":0.13074042,"about_ca_system_score_codex":0.000011186682,"about_ca_system_score_gemma":0.00004712042,"threshold_uncertainty_score":0.2295121},"labels":[],"label_agreement":null},{"id":"W2036257870","doi":"10.1016/j.gene.2008.08.002","title":"Seasonal expressed sequence tags of rainbow smelt (Osmerus mordax) revealed by subtractive hybridization and the identification of two genes up-regulated during winter","year":2008,"lang":"en","type":"article","venue":"Gene","topic":"Physiological and biochemical adaptations","field":"Environmental Science","cited_by":10,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Memorial University of Newfoundland; Institute for Marine Biosciences","funders":"Networks of Centres of Excellence of Canada; Canadian Institutes of Health Research; Division of Ocean Sciences; Canada Research Chairs","keywords":"Suppression subtractive hybridization; Biology; Gene; Smelt; Molecular biology; Gene expression; Genetics; Fish <Actinopterygii>","score_opus":0.016380654999653955,"score_gpt":0.22643378323551966,"score_spread":0.2100531282358657,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2036257870","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99920005,0.0001092863,0.000267807,0.00015430945,0.000018062434,0.0001496175,0.00005910995,0.000009555892,0.00003223485],"genre_scores_gemma":[0.999194,0.00012472307,0.00029313308,0.000028752915,0.000012607325,0.000014711158,0.000043372565,0.0000036776198,0.00028496745],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9992573,0.00006167881,0.00023046193,0.00018765558,0.00016764755,0.000095251366],"domain_scores_gemma":[0.9995928,0.000052089672,0.0001764064,0.00012099849,0.000024609097,0.000033122633],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009648833,0.00007306385,0.000117198026,0.000008549942,0.00009317783,0.000004127284,0.00011664516,0.00002600289,0.000099864585],"category_scores_gemma":[0.000044418623,0.000048713337,0.000036899066,0.00013489932,0.00053027936,0.00009759801,0.00006800215,0.000043014894,0.00000550731],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000081381426,0.000038119626,0.0020537437,0.0000050845474,0.000009879719,4.054154e-7,0.00016977098,0.0004817149,0.99660945,0.000009424076,0.000086459,0.00045456213],"study_design_scores_gemma":[0.0004752281,0.000010806878,0.11703887,0.0000049199307,0.000010042194,0.000005056414,0.000017152253,0.0018373785,0.8799442,0.00058783626,0.0000130435155,0.0000554658],"about_ca_topic_score_codex":0.000098662655,"about_ca_topic_score_gemma":0.0000016375249,"teacher_disagreement_score":0.11666526,"about_ca_system_score_codex":0.000017004844,"about_ca_system_score_gemma":0.0000052709456,"threshold_uncertainty_score":0.19864722},"labels":[],"label_agreement":null},{"id":"W2036614395","doi":"10.1016/j.gene.2007.02.013","title":"Direct observation of histone H2B-YFP fusion proteins and transport of their mRNA between conjugating Paramecia","year":2007,"lang":"en","type":"article","venue":"Gene","topic":"Insect and Arachnid Ecology and Behavior","field":"Biochemistry, Genetics and Molecular Biology","cited_by":10,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Research Council Canada","keywords":"Biology; Histone H2B; Fusion protein; Histone; Cell biology; Messenger RNA; Genetics; Computational biology; Gene; Recombinant DNA","score_opus":0.019296590435088933,"score_gpt":0.27279801486106764,"score_spread":0.2535014244259787,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2036614395","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.998749,0.00028406054,0.000521559,0.000016479586,0.00004482099,0.00016147112,0.00002723904,0.0000048212833,0.00019051603],"genre_scores_gemma":[0.9984358,0.000046429006,0.0011234684,0.000025755086,0.00008444923,0.0000051582915,0.00014803483,0.0000068856716,0.00012400359],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9994632,0.00001577217,0.00022219983,0.0001326019,0.000048537295,0.00011770763],"domain_scores_gemma":[0.99968266,0.000010695163,0.0001205573,0.0001078355,0.000051431074,0.000026793563],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00026854686,0.00007689151,0.00014761186,0.000023575545,0.000050323233,9.314291e-7,0.000051802097,0.00013843217,0.000009178165],"category_scores_gemma":[0.000011217097,0.00006740093,0.000043945573,0.000045763703,0.000074414515,0.0000026683044,0.000016963371,0.0000437471,3.1027392e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000052781863,0.00003515551,0.1737633,0.000018970712,0.00001284525,8.654405e-7,0.00009782237,0.0000013830127,0.8204687,0.0000075712264,0.0000055393366,0.005535031],"study_design_scores_gemma":[0.00020218089,0.00017871326,0.30134138,0.000007854381,0.000018273264,0.0000013578111,0.000020650134,0.0000014755798,0.6979734,0.000012041781,0.00019018825,0.000052529536],"about_ca_topic_score_codex":0.000033673965,"about_ca_topic_score_gemma":0.0000622084,"teacher_disagreement_score":0.12757808,"about_ca_system_score_codex":0.0000041535527,"about_ca_system_score_gemma":0.000020642085,"threshold_uncertainty_score":0.274853},"labels":[],"label_agreement":null},{"id":"W2036905063","doi":"10.1016/s0378-1119(03)00553-5","title":"Characterization of the 5′-flanking region of the rat AJ18 gene","year":2003,"lang":"en","type":"article","venue":"Gene","topic":"Genomics and Chromatin Dynamics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":11,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Biology; 5' flanking region; Primer extension; Gene; Coding region; Genetics; Transcription (linguistics); Promoter; Exon; Molecular biology; Reporter gene; YY1; Untranslated region; Regulatory sequence; Start codon; Regulation of gene expression; Gene expression; Messenger RNA","score_opus":0.005762860401535517,"score_gpt":0.18298926348492583,"score_spread":0.17722640308339033,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2036905063","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.998097,0.00009834409,0.0010827888,0.000060380156,0.00023555815,0.00010211366,0.000008728318,0.0000012422888,0.00031381892],"genre_scores_gemma":[0.9990896,0.00009982374,0.00022309223,0.00008955181,0.000042170323,0.0000027473895,0.000026104823,0.000008912786,0.00041802018],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9995765,0.000046206493,0.00013746298,0.00009883718,0.00006377495,0.00007723264],"domain_scores_gemma":[0.9994291,0.0000018816495,0.00015222855,0.0003601303,0.00004609083,0.000010541178],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000071347284,0.000058627666,0.00006519646,0.000007228753,0.000046230703,0.0000038321728,0.00016417644,0.000060211554,0.0000034167635],"category_scores_gemma":[0.000022236984,0.000037631256,0.00006856091,0.00006358116,0.000040596242,8.3744527e-7,0.000064706925,0.000027850343,3.976579e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000037291063,0.000012416322,0.0029544411,0.000008077704,0.0000108494705,9.038572e-8,0.000034286542,0.00008052662,0.99654186,0.00015737728,0.000028006461,0.00016834096],"study_design_scores_gemma":[0.00012516783,0.00001887749,0.009567788,0.0000066753178,0.0000104639985,0.000012894693,0.00000891665,0.00006555585,0.98737603,0.00008909221,0.0026740169,0.000044495133],"about_ca_topic_score_codex":0.0000028493366,"about_ca_topic_score_gemma":0.000005869805,"teacher_disagreement_score":0.009165802,"about_ca_system_score_codex":0.0000057531756,"about_ca_system_score_gemma":0.00004206948,"threshold_uncertainty_score":0.15345581},"labels":[],"label_agreement":null},{"id":"W2036915721","doi":"10.1016/j.gene.2014.12.016","title":"Priming with a double-stranded DNA virus alters Brassica rapa seed architecture and facilitates a defense response","year":2014,"lang":"en","type":"article","venue":"Gene","topic":"Plant Virus Research Studies","field":"Agricultural and Biological Sciences","cited_by":21,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Lethbridge; Agriculture and Agri-Food Canada","funders":"Agriculture and Agri-Food Canada; Alberta Crop Industry Development Fund","keywords":"Biology; Brassica rapa; Transcriptome; Biotic stress; Brassica; Canola; DNA virus; Genetics; Gene; Abiotic stress; Genome; Botany; Gene expression","score_opus":0.025675950487782748,"score_gpt":0.23004492134310117,"score_spread":0.2043689708553184,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2036915721","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99696743,0.00016766926,0.000024923325,0.002201555,0.000011334459,0.00022624467,0.00013155716,0.00006137814,0.00020790905],"genre_scores_gemma":[0.99922514,0.000051661158,0.00020199345,0.00020948285,0.000055146804,0.000025004805,0.000024348838,0.000001082278,0.00020616809],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99882776,0.00018961263,0.000110326866,0.00031016715,0.00020149219,0.00036066532],"domain_scores_gemma":[0.99908984,0.0006397944,0.000036440746,0.000058858357,0.000035591573,0.00013949347],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003917381,0.00015967803,0.00019568398,0.000020226229,0.00027792476,0.000072179995,0.00013611179,0.00004733547,0.000017000315],"category_scores_gemma":[0.00009496041,0.00005082974,0.000039045022,0.00015192521,0.00017184611,0.000051476592,0.00007913237,0.00012221221,0.000009688862],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0036314218,0.000019704563,0.00040693395,0.000008735753,0.00003091387,0.000011026088,0.000408278,0.00001029622,0.9876426,0.0000053761355,0.000103690625,0.00772101],"study_design_scores_gemma":[0.0022832835,0.0019673954,0.1260403,0.00006620213,0.000038001155,0.00010400035,0.00052147877,0.000121319164,0.8245279,0.00057332957,0.043166593,0.00059017126],"about_ca_topic_score_codex":0.00012249633,"about_ca_topic_score_gemma":0.00095583615,"teacher_disagreement_score":0.16311468,"about_ca_system_score_codex":0.000012126638,"about_ca_system_score_gemma":0.0000072641565,"threshold_uncertainty_score":0.21376005},"labels":[],"label_agreement":null},{"id":"W2037954261","doi":"10.1016/s0378-1119(02)00823-5","title":"Genomic organization of the human mi-er1 gene and characterization of alternatively spliced isoforms: regulated use of a facultative intron determines subcellular localization","year":2002,"lang":"en","type":"article","venue":"Gene","topic":"RNA Research and Splicing","field":"Biochemistry, Genetics and Molecular Biology","cited_by":20,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Memorial University of Newfoundland","funders":"Canadian Institutes of Health Research; Hospital for Sick Children","keywords":"Biology; Intron; Gene isoform; Molecular biology; Exon; Nuclear localization sequence; Subcellular localization; Gene; Genetics","score_opus":0.01778708590268627,"score_gpt":0.23380478370235003,"score_spread":0.21601769779966376,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2037954261","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9917313,0.000068338435,0.007913119,0.0000188894,0.000014775587,0.00020318343,0.000044438464,0.0000027608137,0.0000031930033],"genre_scores_gemma":[0.9989031,0.00023870943,0.00022238174,0.000016152842,0.00002612944,0.0000028953557,0.0002805638,0.000015051732,0.00029500964],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9993298,0.00005659315,0.00025113227,0.00015136944,0.000111380104,0.000099744146],"domain_scores_gemma":[0.99927527,0.0000055352384,0.00025166824,0.00016492279,0.00027612533,0.000026494852],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000064957865,0.000084235246,0.00012574013,0.000047935508,0.00005314269,0.0000084752855,0.000099986326,0.0000678197,0.000013901364],"category_scores_gemma":[0.000068201414,0.00006723889,0.000028422368,0.00016711293,0.00009484942,0.000011327921,0.00007916596,0.000026564236,3.3789223e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000017053255,0.0000323965,0.018149648,0.000034526944,0.000038375718,2.354214e-7,0.00026566465,0.00019204045,0.9806652,0.000010907707,0.000007677943,0.0005862847],"study_design_scores_gemma":[0.0003543509,0.000120014716,0.06501598,0.00001664244,0.000015036329,0.000002812478,0.000017685612,0.003627322,0.9307279,0.000005600661,0.000036384925,0.000060278842],"about_ca_topic_score_codex":0.000054627755,"about_ca_topic_score_gemma":0.000009999001,"teacher_disagreement_score":0.049937293,"about_ca_system_score_codex":0.000010546132,"about_ca_system_score_gemma":0.000013292929,"threshold_uncertainty_score":0.27419224},"labels":[],"label_agreement":null},{"id":"W2038027849","doi":"10.1016/j.gene.2013.03.081","title":"The smallest of the small","year":2013,"lang":"en","type":"article","venue":"Gene","topic":"Craniofacial Disorders and Treatments","field":"Biochemistry, Genetics and Molecular Biology","cited_by":6,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia; BC Children's Hospital","funders":"","keywords":"Biology; Dwarfism; Short stature; Brother; Genealogy; Evolutionary biology; Genetics; Gene; Endocrinology; Anthropology","score_opus":0.005460735043038183,"score_gpt":0.18724776591569134,"score_spread":0.18178703087265316,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2038027849","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9962486,0.0010507256,0.000038601145,0.0003216567,0.00009067767,0.00012856048,0.000005139471,0.0000013851493,0.0021146485],"genre_scores_gemma":[0.9977673,0.00030678028,0.00005789392,0.000083734325,0.00003111857,0.00001753133,0.000007841332,0.000004557011,0.0017232251],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99973863,0.000012556321,0.0000593329,0.00007212077,0.00003497536,0.00008237013],"domain_scores_gemma":[0.9996937,0.0000032129933,0.00002645049,0.0002295644,0.00003247997,0.000014611115],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00002302224,0.000044627635,0.000032482156,0.0000025107067,0.00008567556,0.000009837373,0.00013567421,0.000030230574,0.000014656895],"category_scores_gemma":[0.000014146002,0.000022190761,0.000054387456,0.000030048468,0.00004780205,2.9789314e-7,0.000065165455,0.000016280428,0.000015146966],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000014250264,0.00006332,0.034071032,0.0000042089728,0.00008890165,3.3025145e-7,0.00005084219,0.000013433101,0.9376749,0.00023755991,0.0033978461,0.024383424],"study_design_scores_gemma":[0.00071250985,0.00014189434,0.2924945,0.0000068782815,0.000023647472,0.0000056912145,0.00012750152,0.000012821579,0.6652332,0.0013261833,0.039779846,0.00013529824],"about_ca_topic_score_codex":0.00011067676,"about_ca_topic_score_gemma":0.00016717939,"teacher_disagreement_score":0.27244163,"about_ca_system_score_codex":0.000001600639,"about_ca_system_score_gemma":0.000013833843,"threshold_uncertainty_score":0.090491295},"labels":[],"label_agreement":null},{"id":"W2038575389","doi":"10.1016/j.gene.2006.07.003","title":"Alveolate and chlorophycean mitochondrial cox2 genes split twice independently","year":2006,"lang":"en","type":"article","venue":"Gene","topic":"Protist diversity and phylogeny","field":"Biochemistry, Genetics and Molecular Biology","cited_by":47,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia; Canadian Institute for Advanced Research","funders":"Canadian Institutes of Health Research; Michael Smith Health Research BC; Genome Canada; Canadian Institute for Advanced Research","keywords":"Biology; Apicoplast; Apicomplexa; Phylogenetic tree; Plastid; Mitochondrial DNA; Genome; Genetics; Gene; Sister group; Evolutionary biology; Clade","score_opus":0.004268576946956246,"score_gpt":0.18813061830467562,"score_spread":0.18386204135771939,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2038575389","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9955662,0.001999264,0.0005086762,0.000058072346,0.00025792708,0.00014006958,0.0000599244,0.00001201417,0.0013978513],"genre_scores_gemma":[0.9955039,0.0001380453,0.0015131206,0.00018950674,0.0008529284,0.0000053726953,0.00018067333,0.000012815322,0.0016036128],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.999274,0.000025432753,0.000106226194,0.00029760136,0.000097463504,0.00019923162],"domain_scores_gemma":[0.9996427,0.0000035387213,0.00004297122,0.00021162022,0.000036992944,0.000062134466],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000048688114,0.00012117847,0.00009775493,0.000023744164,0.0001103168,0.000030439523,0.00013913208,0.00013769668,0.000033603297],"category_scores_gemma":[0.000006202668,0.00012799684,0.000054313034,0.00004065097,0.0000652472,0.0000033438462,0.0001557771,0.000055964912,0.000030393787],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012849711,0.000030817006,0.012075944,0.000009103825,0.00003324448,0.000013133721,0.000013763453,0.000018855326,0.9848071,0.00014633947,0.0015566727,0.0011665332],"study_design_scores_gemma":[0.0010440618,0.00020634064,0.046535324,0.0000034944783,0.000035006182,0.000049266753,0.00001385969,0.000017563449,0.9093772,0.00052078883,0.041917846,0.000279228],"about_ca_topic_score_codex":0.00016086064,"about_ca_topic_score_gemma":0.00006731959,"teacher_disagreement_score":0.07542988,"about_ca_system_score_codex":0.0000062280947,"about_ca_system_score_gemma":0.000025598616,"threshold_uncertainty_score":0.52195597},"labels":[],"label_agreement":null},{"id":"W2038974553","doi":"10.1016/s0378-1119(99)00546-6","title":"A comparison of the pectate lyase genes, pel-1 and pel-2, of Colletotrichum gloeosporioides f.sp. malvae and the relationship between their expression in culture and during necrotrophic infection","year":2000,"lang":"en","type":"article","venue":"Gene","topic":"Polysaccharides and Plant Cell Walls","field":"Agricultural and Biological Sciences","cited_by":50,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"","keywords":"Pectate lyase; Pectinase; Biology; Microbiology; Pectin lyase; Extracellular; Pectin; Gene expression; Gene; Enzyme; Fungus; Lyase; Botany; Biochemistry","score_opus":0.02289417796628591,"score_gpt":0.23009404559103347,"score_spread":0.20719986762474757,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2038974553","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9951866,0.004236868,4.4689727e-7,0.00022396527,0.000016216572,0.00022368362,0.000048008533,0.000006131775,0.00005806233],"genre_scores_gemma":[0.9982766,0.0014294833,0.000018920891,0.000010996035,0.000050166596,0.000005084183,0.000009475102,7.4716706e-7,0.00019854582],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9993177,0.00012483707,0.00021364051,0.00014362647,0.000087931585,0.00011224796],"domain_scores_gemma":[0.9995323,0.0002534367,0.000117462085,0.00004815798,0.000015317913,0.000033321867],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00018503943,0.00009310467,0.00019571207,0.00001122814,0.0002071334,0.000022329321,0.000072614865,0.000073252304,0.000030653708],"category_scores_gemma":[0.000025081737,0.000027977576,0.000033776403,0.00020752479,0.000112129565,0.00006085764,0.000051163075,0.000110899746,3.543795e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000731637,0.0000138453715,0.7637646,0.000016638698,0.000004240715,3.0955658e-7,0.00053299894,0.00001993373,0.23147449,0.000013821002,0.000010492035,0.004075463],"study_design_scores_gemma":[0.00036022867,0.000046525838,0.9674648,0.00004673481,0.000014620191,0.0000075860185,0.00012227909,0.00006169659,0.031245118,0.00030258737,0.00026633468,0.000061470746],"about_ca_topic_score_codex":0.0006855588,"about_ca_topic_score_gemma":0.00042622007,"teacher_disagreement_score":0.20370021,"about_ca_system_score_codex":0.000005717389,"about_ca_system_score_gemma":0.0000037003626,"threshold_uncertainty_score":0.15931235},"labels":[],"label_agreement":null},{"id":"W2039488881","doi":"10.1016/j.gene.2013.01.034","title":"Evolution of the ONSEN retrotransposon family activated upon heat stress in Brassicaceae","year":2013,"lang":"en","type":"article","venue":"Gene","topic":"Chromosomal and Genetic Variations","field":"Agricultural and Biological Sciences","cited_by":81,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Precursory Research for Embryonic Science and Technology; Institute of Genetics; Akiyama Life Science Foundation","keywords":"Brassicaceae; Biology; Arabidopsis; Retrotransposon; Arabidopsis thaliana; Gene; Brassica rapa; Genetics; Gene family; Phylogenetic tree; Transposable element; Botany; Genome","score_opus":0.012797786456630855,"score_gpt":0.19241511626568691,"score_spread":0.17961732980905606,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2039488881","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9972553,0.00008793782,0.0000018920663,0.0020741345,0.000072036484,0.00020367357,0.00003779755,0.000011994044,0.00025520404],"genre_scores_gemma":[0.9997435,0.000008067602,0.000035152792,0.000038778315,0.000051632516,0.000013157149,0.000013640924,3.8553787e-7,0.00009567784],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9994843,0.000055797198,0.00012021719,0.00011520054,0.00010443565,0.00012004624],"domain_scores_gemma":[0.99982536,0.00003649952,0.000027797012,0.0000512738,0.000032915726,0.00002616598],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000038429916,0.000056340752,0.000073618234,0.000005742858,0.00006215825,0.000009610359,0.0001364797,0.000055162564,0.0001754357],"category_scores_gemma":[0.00001160856,0.000018151364,0.00004349603,0.00030362207,0.000020400372,0.000039793,0.000024403118,0.00005561617,0.000014870225],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000040647847,0.000046179342,0.036281656,0.0000012863209,0.0000023492755,9.024852e-8,0.00003814635,0.00010259178,0.96151674,0.000035309946,0.000038914313,0.0019326962],"study_design_scores_gemma":[0.00006548116,0.000037314083,0.7464814,0.000012414341,0.0000023106766,4.3990767e-7,0.000060728576,0.00011020149,0.25263944,0.0003646409,0.00018733084,0.000038281494],"about_ca_topic_score_codex":0.0033381707,"about_ca_topic_score_gemma":0.0027387806,"teacher_disagreement_score":0.7101998,"about_ca_system_score_codex":0.000029190349,"about_ca_system_score_gemma":0.000008813327,"threshold_uncertainty_score":0.5046338},"labels":[],"label_agreement":null},{"id":"W2039586476","doi":"10.1016/j.gene.2007.01.039","title":"Metabolic effects of hemoglobin gene expression in plants","year":2007,"lang":"en","type":"review","venue":"Gene","topic":"Plant responses to water stress","field":"Agricultural and Biological Sciences","cited_by":91,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Biology; Hemoglobin; Gene expression; Gene; Genetics; Computational biology; Biochemistry","score_opus":0.039348061115363854,"score_gpt":0.27860076462434064,"score_spread":0.2392527035089768,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2039586476","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.06346064,0.935509,0.0000010086276,0.0000029122687,0.00019171205,0.0004706951,0.00026768123,0.000023337245,0.00007298522],"genre_scores_gemma":[0.00035873835,0.99856853,0.00018240087,0.000013707833,0.00019241212,0.000035768022,0.00044239225,0.000001970843,0.00020408811],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9982664,0.0002612676,0.00047231585,0.0003813602,0.00024212716,0.00037652353],"domain_scores_gemma":[0.99903864,0.00050033,0.00024702476,0.00010850787,0.000013923254,0.00009156066],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00024584055,0.0003092657,0.0012121311,0.00006436366,0.00003138358,0.000015145103,0.00048454173,0.00033626656,0.00004168615],"category_scores_gemma":[0.000038488914,0.00010023787,0.00023945606,0.0003405119,0.00002798598,0.00003711034,0.00016662918,0.00018582087,0.000047749345],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000017346525,0.000047103185,0.000016457174,0.0008993913,0.000014680626,0.000113815935,0.000007928895,1.6048112e-7,0.084764436,6.9216003e-7,0.000084360094,0.91403365],"study_design_scores_gemma":[0.00009091792,0.000047151545,0.0012394773,0.0033947052,0.00004893766,0.000066759196,0.0000013961898,1.8845316e-7,0.17614493,0.0000052536006,0.8187244,0.00023586668],"about_ca_topic_score_codex":0.000107417414,"about_ca_topic_score_gemma":0.00014942721,"teacher_disagreement_score":0.91379774,"about_ca_system_score_codex":0.00002382107,"about_ca_system_score_gemma":0.000017846638,"threshold_uncertainty_score":0.40875816},"labels":[],"label_agreement":null},{"id":"W2040939499","doi":"10.1016/s0378-1119(03)00429-3","title":"Phylogenetic relationships of non-mitochondrial nucleotide transport proteins in bacteria and eukaryotes","year":2003,"lang":"en","type":"article","venue":"Gene","topic":"Legume Nitrogen Fixing Symbiosis","field":"Agricultural and Biological Sciences","cited_by":82,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canadian Institute for Advanced Research; Université de Montréal","funders":"National Institute of Allergy and Infectious Diseases","keywords":"Biology; Chloroplast; Phylogenetic tree; Phylogenetics; Genetics; Endosymbiosis; Gene; Plastid","score_opus":0.01564248512130026,"score_gpt":0.1981406921133454,"score_spread":0.18249820699204514,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2040939499","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.999177,0.00009058716,0.0000026838738,0.00010893264,0.000056930836,0.00025774675,0.000021775231,0.000011784844,0.00027257644],"genre_scores_gemma":[0.99670506,0.0000082135275,0.0031381657,0.000018873296,0.000053523992,0.000016677874,0.000015376632,0.0000010658863,0.000043043055],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9992922,0.00007698097,0.00019886841,0.0001878101,0.00008981885,0.00015431574],"domain_scores_gemma":[0.99977326,0.00005573632,0.000053675732,0.00004706883,0.000021770704,0.00004848709],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013682549,0.000086562664,0.00013412103,0.000014072006,0.000057539557,0.000007889417,0.00007931152,0.0000753501,0.00013719333],"category_scores_gemma":[0.00005064503,0.000039404404,0.000035199366,0.00021748846,0.000044082037,0.00004543655,0.0000093095505,0.00007827882,0.000008191905],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000008513445,0.000031031854,0.2085394,0.0000035903508,0.00000366441,0.0000013895425,0.00007326381,5.458894e-7,0.7906953,0.000030861906,0.0000054229936,0.0006070256],"study_design_scores_gemma":[0.00012890737,0.00006284686,0.6304594,0.000008716804,0.0000053968615,0.0000026161747,0.00002679154,0.0000018040636,0.36893702,0.00022144358,0.000079242105,0.00006580205],"about_ca_topic_score_codex":0.00014271085,"about_ca_topic_score_gemma":0.0005413023,"teacher_disagreement_score":0.42192003,"about_ca_system_score_codex":0.000009139678,"about_ca_system_score_gemma":0.00000853245,"threshold_uncertainty_score":0.1606865},"labels":[],"label_agreement":null},{"id":"W2040954960","doi":"10.1016/s0378-1119(03)00430-x","title":"A human homolog of Additional sex combs, ADDITIONAL SEX COMBS-LIKE 1, maps to chromosome 20q11","year":2003,"lang":"en","type":"article","venue":"Gene","topic":"Epigenetics and DNA Methylation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":98,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"Canadian Institutes of Health Research; Medical Research Council Canada","keywords":"Biology; Homeotic gene; Genetics; Gene; Enhancer; Gene silencing; Homology (biology); Molecular biology; Transcription factor","score_opus":0.011823024876735977,"score_gpt":0.2479204799931742,"score_spread":0.23609745511643823,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2040954960","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9531637,0.0012201589,0.0020037566,0.00016297342,0.0003618818,0.000504879,0.02780292,0.000030402602,0.0147493435],"genre_scores_gemma":[0.95587707,0.000085818814,0.007435479,0.0005314436,0.00040180943,0.00012930547,0.02999767,0.00004173303,0.0054996745],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9987154,0.00010246018,0.00030517348,0.00037689702,0.00023701141,0.00026307808],"domain_scores_gemma":[0.9992046,0.000031410505,0.00011520354,0.00036031456,0.00014763157,0.00014084217],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00017434434,0.00018018861,0.00019817549,0.00007255258,0.00012875501,0.000014496733,0.00016415777,0.0001836169,0.007192698],"category_scores_gemma":[0.00007252266,0.00019686735,0.00011066526,0.00011640538,0.00009198009,0.0000033921451,0.000075307624,0.00008406981,0.0000634905],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000012451416,0.0001921271,0.00033586254,0.000012886133,0.00007148473,0.000005030627,0.000027995235,0.00019494732,0.8159474,0.0006377257,0.18200514,0.0005569537],"study_design_scores_gemma":[0.00046737381,0.00039506677,0.002666895,0.000011602894,0.000014274949,0.000013138547,0.00002015241,0.0000063120187,0.5632446,0.0009990353,0.4319297,0.00023186182],"about_ca_topic_score_codex":0.000010332943,"about_ca_topic_score_gemma":0.000023098268,"teacher_disagreement_score":0.2527028,"about_ca_system_score_codex":0.000020978252,"about_ca_system_score_gemma":0.00010898454,"threshold_uncertainty_score":0.99371487},"labels":[],"label_agreement":null},{"id":"W2041163519","doi":"10.1016/j.gene.2013.01.024","title":"Transcriptional regulation of the purine de novo synthesis gene Prat in Drosophila melanogaster","year":2013,"lang":"en","type":"article","venue":"Gene","topic":"RNA modifications and cancer","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of New Brunswick","funders":"Canadian Institutes of Health Research","keywords":"Biology; Gene; Drosophila melanogaster; Transcription (linguistics); Genetics; Gene duplication; Melanogaster; Regulatory sequence; Regulation of gene expression","score_opus":0.008995413165660365,"score_gpt":0.20853322729406418,"score_spread":0.19953781412840382,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2041163519","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9974345,0.00035469804,0.0007392965,0.0008983502,0.00004834212,0.00013287769,0.000015632235,0.0000019319148,0.00037439988],"genre_scores_gemma":[0.9979801,0.00007732023,0.00091497996,0.000113891576,0.00009833469,0.00008556802,0.000020329513,0.0000074600002,0.0007019879],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99955004,0.000033317207,0.00012719033,0.00012289498,0.000070829585,0.00009571549],"domain_scores_gemma":[0.99966097,0.0000036077515,0.000041300766,0.00022774338,0.000046518686,0.000019832278],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00007307991,0.000055473734,0.00005624864,0.000019052073,0.000026213462,0.0000069375183,0.00010675498,0.000061799954,0.00011743486],"category_scores_gemma":[0.0000130733115,0.000042520158,0.00004553043,0.00005979638,0.000035832298,0.000003408041,0.000018545108,0.000027774988,0.000005854866],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000011146494,0.000028132505,0.0027634136,0.0000043841246,0.000009277738,8.3335415e-8,0.00002427003,0.00036120342,0.9953738,0.00009712563,0.00019090285,0.001136269],"study_design_scores_gemma":[0.00014555357,0.000013125609,0.22660522,0.000004580556,0.0000058443543,0.000007045513,0.000008052129,0.00008760886,0.77103096,0.00019648985,0.0018531776,0.00004233435],"about_ca_topic_score_codex":0.000029922378,"about_ca_topic_score_gemma":0.000029321793,"teacher_disagreement_score":0.22434282,"about_ca_system_score_codex":0.00001430706,"about_ca_system_score_gemma":0.000042600892,"threshold_uncertainty_score":0.17339218},"labels":[],"label_agreement":null},{"id":"W2041358155","doi":"10.1016/j.gene.2014.01.019","title":"Diagnosis and therapeutic monitoring of inborn errors of creatine metabolism and transport using liquid chromatography–tandem mass spectrometry in urine, plasma and CSF","year":2014,"lang":"en","type":"article","venue":"Gene","topic":"Muscle metabolism and nutrition","field":"Biochemistry, Genetics and Molecular Biology","cited_by":21,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hospital for Sick Children; University of Toronto","funders":"","keywords":"Creatine; Analyte; Urine; Chromatography; Tandem mass spectrometry; Mass spectrometry; Liquid chromatography–mass spectrometry; High-performance liquid chromatography; Chemistry; Creatinine; Biochemistry","score_opus":0.012059049958179547,"score_gpt":0.23957761393426893,"score_spread":0.22751856397608938,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2041358155","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98433125,0.0151247755,0.000331064,0.000015820926,0.000047611047,0.000107607426,0.000017651611,0.000003303947,0.00002093237],"genre_scores_gemma":[0.98552775,0.00930573,0.005023103,0.000009041946,0.000100176025,0.000009394229,0.0000099021945,0.000013044511,0.0000018459012],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99931836,0.000043830445,0.00021653653,0.00021258039,0.000078985395,0.00012972481],"domain_scores_gemma":[0.9996983,0.000015826652,0.000082115796,0.00012620122,0.000029104855,0.000048465823],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00017672012,0.00011762594,0.00025950035,0.00012825223,0.00002423954,0.0000043029077,0.000044377357,0.00009408879,0.0000026003415],"category_scores_gemma":[0.000013919558,0.00011331636,0.000035680874,0.00013972474,0.000088225344,0.0000053265535,0.000022221424,0.00004505015,1.8799605e-8],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007963876,0.000033637043,0.21062395,0.00007825621,0.000032907756,5.337548e-7,0.000044291628,0.000005599997,0.7870375,0.000016121749,3.6714817e-7,0.0020472282],"study_design_scores_gemma":[0.00070074986,0.00010970009,0.3991231,0.000028976696,0.000047630805,0.00000470419,0.000027671469,0.000035886147,0.59969586,0.000049016333,0.00010362364,0.0000731092],"about_ca_topic_score_codex":0.00006309367,"about_ca_topic_score_gemma":0.000010630273,"teacher_disagreement_score":0.18849915,"about_ca_system_score_codex":0.0000017557121,"about_ca_system_score_gemma":0.000008343259,"threshold_uncertainty_score":0.46209073},"labels":[],"label_agreement":null},{"id":"W2042300018","doi":"10.1016/j.gene.2013.06.020","title":"WITHDRAWN: Corrigendum to “Ring chromosome 21 presenting with sacrococcygeal teratoma: Prenatal diagnosis, molecular cytogenetic characterization and literature review” [Gene 522 (2013) 111–116]","year":2013,"lang":"en","type":"article","venue":"Gene","topic":"Teratomas and Epidermoid Cysts","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Biology; Chromosome; Ring chromosome; Genetics; Computational biology; Gene; Karyotype","score_opus":0.007385533910206683,"score_gpt":0.2274081654117122,"score_spread":0.2200226315015055,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2042300018","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9695855,0.02503551,0.00073525147,0.0021241494,0.00020675697,0.002081723,0.00006175705,0.000115480594,0.000053909782],"genre_scores_gemma":[0.9851644,0.006230347,0.003653451,0.0024171148,0.00046739966,0.00078884873,0.00060128,0.00009550656,0.0005816477],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9977633,0.0000747915,0.0004709212,0.0007110293,0.00039066205,0.0005892926],"domain_scores_gemma":[0.998492,0.000014931658,0.00016855588,0.0005772074,0.0002758232,0.0004714648],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00013278502,0.0004115269,0.0005981353,0.00014992629,0.00015885627,0.00023581604,0.00014723768,0.00013556269,0.0001447794],"category_scores_gemma":[0.000045989014,0.0003268626,0.00007800658,0.00048134176,0.000049011862,0.00031172068,0.00015536872,0.00024122043,0.00007298814],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000074149684,0.00015224055,0.043456394,0.002240759,0.00017425678,0.0011193814,0.0007975389,0.000008451902,0.94199574,0.000011787528,0.0023362273,0.007633063],"study_design_scores_gemma":[0.0021659487,0.00078360515,0.29013613,0.0077674794,0.00033515913,0.003519752,0.000027692777,0.000488196,0.6821267,0.000009345924,0.011742585,0.00089740934],"about_ca_topic_score_codex":0.00003901277,"about_ca_topic_score_gemma":0.000009218314,"teacher_disagreement_score":0.25986907,"about_ca_system_score_codex":0.000049615253,"about_ca_system_score_gemma":0.00006781892,"threshold_uncertainty_score":0.99991834},"labels":[],"label_agreement":null},{"id":"W2042781252","doi":"10.1016/j.gene.2013.04.009","title":"Meeting report for Odd Pols 2012","year":2013,"lang":"en","type":"editorial","venue":"Gene","topic":"RNA and protein synthesis mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval; Hôtel-Dieu de Québec","funders":"National Center for Research Resources; National Institute of General Medical Sciences; National Institutes of Health; Canadian Institutes of Health Research; Cancer Research Society; University of Alberta; University of Dundee; University of Oklahoma; University of Michigan","keywords":"Presentation (obstetrics); RNA polymerase II; Biology; Library science; RNA polymerase; Polymerase; Closing (real estate); Transcription (linguistics); Genetics; RNA; Political science; Law; Computer science; DNA; Medicine; Gene; Linguistics; Philosophy","score_opus":0.009713862338268958,"score_gpt":0.25895318581108123,"score_spread":0.24923932347281227,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2042781252","genre_codex":"editorial","genre_gemma":"editorial","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"editorial","genre_consensus":"editorial","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0009823027,0.006492087,0.012259176,0.000121121804,0.975796,0.0010641357,0.00032956252,0.000034154957,0.0029214781],"genre_scores_gemma":[0.00016097531,0.00051622675,0.010645252,0.000057488076,0.9398335,0.00051313674,0.0048000673,0.00010891268,0.04336441],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99833906,0.000048546335,0.00035900864,0.0006034515,0.0002729696,0.00037698596],"domain_scores_gemma":[0.99854726,0.0000639766,0.0003187989,0.0006904708,0.0002808777,0.000098592776],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0005379063,0.0002868675,0.00030623694,0.000035007084,0.00009957726,0.00005048228,0.0003246261,0.0011778759,0.00007825155],"category_scores_gemma":[0.0010011873,0.0002724023,0.00022195176,0.000026992348,0.000024791101,0.0000026473783,0.00012992053,0.00012801526,0.000057692105],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000016596903,0.00000930731,3.66949e-7,0.000028668295,0.000048251342,0.000004250937,0.0000021312903,7.13482e-7,0.4453498,0.0000029065307,0.5533157,0.0012212973],"study_design_scores_gemma":[0.00012764994,0.00009048849,3.073024e-7,0.000021280204,0.000030325971,0.000007954773,0.0000024845733,6.029236e-7,0.40731537,0.00012434261,0.5920772,0.00020195432],"about_ca_topic_score_codex":0.000044236844,"about_ca_topic_score_gemma":0.000009954885,"teacher_disagreement_score":0.040442932,"about_ca_system_score_codex":0.000016102073,"about_ca_system_score_gemma":0.00022656926,"threshold_uncertainty_score":0.9999728},"labels":[],"label_agreement":null},{"id":"W2042856823","doi":"10.1016/j.gene.2013.07.064","title":"Dehydration mediated microRNA response in the African clawed frog Xenopus laevis","year":2013,"lang":"en","type":"article","venue":"Gene","topic":"MicroRNA in disease regulation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":57,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Carleton University","funders":"","keywords":"Aestivation; Xenopus; African clawed frog; Biology; Dehydration; Amphibian; microRNA; Internal medicine; Salientia; GRENOUILLE; Ectotherm; Endocrinology; Toad; Ecology; Zoology; Cell biology; Biochemistry; Gene","score_opus":0.007784695040739965,"score_gpt":0.22577627258552685,"score_spread":0.21799157754478687,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2042856823","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9972966,0.0006372043,0.000183569,0.0012552792,0.00005162614,0.00034148735,0.000015239746,0.000009811553,0.000209225],"genre_scores_gemma":[0.9983895,0.000032051546,0.00038952628,0.00054252695,0.00011615378,0.00007488041,0.00031045498,0.000013835226,0.0001310972],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9990714,0.0002698557,0.00017111635,0.00020921667,0.00010447395,0.00017394783],"domain_scores_gemma":[0.9994608,0.000029305347,0.00006258734,0.0003453586,0.000057258243,0.00004467968],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003050708,0.00009974966,0.000074079464,0.00004231142,0.0000469984,0.00003411189,0.0001803066,0.000102894286,0.00007320303],"category_scores_gemma":[0.00015365036,0.00007868322,0.000042664553,0.00013675573,0.00004096678,0.000004614862,0.00003888963,0.000053283085,0.000110008856],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00017960518,0.00003223166,0.00035302996,0.0000028654429,0.000011106128,0.0000020808602,0.00012077533,0.000037924558,0.9955735,0.000004027493,0.0032873256,0.00039548278],"study_design_scores_gemma":[0.00054078543,0.00011542518,0.06024427,0.0000049326804,0.0000120780605,0.000010327973,0.00010992875,0.00019782005,0.9156261,0.000089501955,0.02289592,0.000152904],"about_ca_topic_score_codex":0.00006286959,"about_ca_topic_score_gemma":0.000039759358,"teacher_disagreement_score":0.079947434,"about_ca_system_score_codex":0.000023110602,"about_ca_system_score_gemma":0.00005557069,"threshold_uncertainty_score":0.32086083},"labels":[],"label_agreement":null},{"id":"W2044294201","doi":"10.1016/j.gene.2015.04.035","title":"Identification of rare protein disulfide isomerase gene variants in amyotrophic lateral sclerosis patients","year":2015,"lang":"en","type":"article","venue":"Gene","topic":"Amyotrophic Lateral Sclerosis Research","field":"Medicine","cited_by":78,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Montreal Neurological Institute and Hospital","funders":"Fondo Nacional de Desarrollo Científico y Tecnológico; Colorado Power Electronics Center, University of Colorado Boulder; National Heart, Lung, and Blood Institute; National Institutes of Health; Fundación Copec-UC; National Institute of Neurological Disorders and Stroke; Comisión Nacional de Investigación Científica y Tecnológica; AFM-Téléthon; Fondo de Fomento al Desarrollo Científico y Tecnológico; Canadian Institutes of Health Research; Fundación Alfonso Martín Escudero; ALS Therapy Alliance; Muscular Dystrophy Association; Michael J. Fox Foundation for Parkinson's Research","keywords":"Biology; Amyotrophic lateral sclerosis; Missense mutation; Protein disulfide-isomerase; Exome sequencing; Genetics; Single-nucleotide polymorphism; Gene; Nonsynonymous substitution; Exome; Endoplasmic reticulum; Mutation; Genotype; Disease; Pathology; Medicine","score_opus":0.04514712867506138,"score_gpt":0.2806519074516507,"score_spread":0.23550477877658932,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2044294201","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9974179,0.00017687424,0.00009162393,0.0009763168,0.000117885254,0.0010747906,0.000062058185,0.00003289365,0.000049634873],"genre_scores_gemma":[0.9981921,0.00007153736,0.00071314286,0.00016696908,0.00008251932,0.00012525622,0.00014333498,0.000038736096,0.00046645652],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99755293,0.00014999279,0.0006766883,0.00041044553,0.0007896896,0.00042023207],"domain_scores_gemma":[0.99855614,0.000013453433,0.00017744632,0.00054777844,0.0004008397,0.0003043188],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00045121743,0.00018175162,0.00037401408,0.00025550133,0.000039530412,0.000027311382,0.00020434515,0.000118650656,0.00010624259],"category_scores_gemma":[0.00027302446,0.00015668658,0.000076315846,0.0005543274,0.0000901611,0.0002011336,0.00013577672,0.00021402189,0.0001418976],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0004755036,0.00051292457,0.09077784,0.000051532403,0.00003311912,0.000025819427,0.00030103704,0.00004560456,0.9045735,0.000008857169,0.00035542806,0.0028388486],"study_design_scores_gemma":[0.0040660677,0.0003323584,0.83414423,0.00017176244,0.00001889401,0.0000041778662,0.000013125972,0.0005437788,0.16034654,0.0001605361,0.000051411018,0.00014715105],"about_ca_topic_score_codex":0.00034381344,"about_ca_topic_score_gemma":0.000015661692,"teacher_disagreement_score":0.74422693,"about_ca_system_score_codex":0.00026280587,"about_ca_system_score_gemma":0.00015697895,"threshold_uncertainty_score":0.63894933},"labels":[],"label_agreement":null},{"id":"W2044378555","doi":"10.1016/j.gene.2006.02.022","title":"Characterization of the murine Inpp4b gene and identification of a novel isoform","year":2006,"lang":"en","type":"article","venue":"Gene","topic":"Cellular transport and secretion","field":"Biochemistry, Genetics and Molecular Biology","cited_by":47,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Montreal Clinical Research Institute; Université de Montréal","funders":"Canadian Institutes of Health Research; National Science Council","keywords":"Biology; Gene isoform; Phosphatase; Inositol; Gene; Biochemistry; Cell biology; Molecular biology; Phosphorylation; Receptor","score_opus":0.0053393653499102444,"score_gpt":0.18659952386642242,"score_spread":0.18126015851651217,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2044378555","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9702873,0.000114240385,0.02935037,0.00003394499,0.00004820108,0.00008702765,0.000041476243,0.0000016670836,0.0000357372],"genre_scores_gemma":[0.99760056,0.0000756511,0.00013364296,0.000011687366,0.000060534443,0.0000031088134,0.0018642399,0.0000050254325,0.00024552658],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99963844,0.00000502961,0.00016505834,0.000089253735,0.00005583923,0.000046409114],"domain_scores_gemma":[0.99969965,6.92248e-7,0.00010499593,0.00014069685,0.000046058616,0.000007917988],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00006234732,0.00004212708,0.000051730538,0.00001423279,0.00001992665,0.0000026247853,0.000047529982,0.000046693847,0.0000032586274],"category_scores_gemma":[0.0000029463074,0.000034354172,0.000030268395,0.00004733097,0.000035869252,0.0000019758934,0.000016377062,0.000013842414,1.7789478e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000014290948,0.00003843257,0.004932361,0.000015598209,0.000005869586,3.8065174e-8,0.000017645301,0.000012392693,0.99469537,0.000050234205,0.000001273489,0.00021652454],"study_design_scores_gemma":[0.00018142432,0.000016465365,0.21004014,0.0000024545552,0.000009774447,0.0000020697005,0.0000022452136,0.000080710844,0.7889323,0.00001173835,0.0006919145,0.000028743132],"about_ca_topic_score_codex":0.000025137546,"about_ca_topic_score_gemma":0.000020803882,"teacher_disagreement_score":0.20576301,"about_ca_system_score_codex":0.0000020179427,"about_ca_system_score_gemma":0.000011126652,"threshold_uncertainty_score":0.14009225},"labels":[],"label_agreement":null},{"id":"W2045961345","doi":"10.1016/j.gene.2011.02.002","title":"β-Catenin independent cross-control between the estradiol and Wnt pathways in osteoblasts","year":2011,"lang":"en","type":"article","venue":"Gene","topic":"Estrogen and related hormone effects","field":"Biochemistry, Genetics and Molecular Biology","cited_by":18,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Eunice Kennedy Shriver National Institute of Child Health and Human Development; Virginia Agricultural Experiment Station, Virginia Polytechnic Institute and State University; Soochow University; University of British Columbia; National Institute of Arthritis and Musculoskeletal and Skin Diseases; National University of Singapore","keywords":"Wnt signaling pathway; Biology; Osteoblast; RUNX2; Internal medicine; Osteoprotegerin; Endocrinology; Catenin; Estrogen receptor; LRP5; Signal transduction; Cell biology; Phosphatase; Estrogen; Receptor; Phosphorylation; Biochemistry; In vitro","score_opus":0.014049230564549429,"score_gpt":0.2225203323883919,"score_spread":0.20847110182384246,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2045961345","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99717855,0.0017878845,0.00010410085,0.000032716005,0.00007178892,0.00022381208,0.0000151857785,0.0000080632635,0.0005778883],"genre_scores_gemma":[0.9994451,0.00012993578,0.000082412436,0.00007403603,0.00013721942,0.000024522727,0.000025752908,0.000015831634,0.00006520732],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99920946,0.000062098814,0.000160527,0.00025139764,0.0000779935,0.00023853488],"domain_scores_gemma":[0.99965066,0.000011517714,0.000047446767,0.00019575187,0.000019513385,0.000075097225],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00022903238,0.00012948441,0.00012001195,0.000026310418,0.000063058505,0.000019114152,0.00015315646,0.00020167073,0.000008058634],"category_scores_gemma":[0.000017193763,0.000089103996,0.00004943872,0.000048677215,0.00009411421,0.0000030444571,0.000068113484,0.00015472155,0.000015007487],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011516834,0.00003834986,0.14357476,0.000007219112,0.000086406406,0.00003117871,0.00027420314,0.000019650657,0.850696,0.000048212023,0.000046769837,0.0050620367],"study_design_scores_gemma":[0.0011776747,0.00030619753,0.27026197,0.0000062873883,0.000022331962,0.000044676275,0.000022778993,0.000017774195,0.7276767,0.00015925492,0.00016193368,0.00014244347],"about_ca_topic_score_codex":0.000050023602,"about_ca_topic_score_gemma":0.000012378966,"teacher_disagreement_score":0.12668721,"about_ca_system_score_codex":0.000007819434,"about_ca_system_score_gemma":0.0000332361,"threshold_uncertainty_score":0.36335558},"labels":[],"label_agreement":null},{"id":"W2046774147","doi":"10.1016/j.gene.2012.11.004","title":"Development of a high resolution melting method for genotyping of risk HLA-DQA1 and PLA2R1 alleles and ethnic distribution of these risk alleles","year":2012,"lang":"en","type":"article","venue":"Gene","topic":"Renal Diseases and Glomerulopathies","field":"Medicine","cited_by":15,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval; Institut Universitaire de Cardiologie et de Pneumologie de Québec","funders":"","keywords":"Genotyping; Biology; High Resolution Melt; Single-nucleotide polymorphism; Genotype; Allele; Genetics; SNP genotyping; SNP; Allele frequency; Human leukocyte antigen; genomic DNA; Gene","score_opus":0.029292888792676358,"score_gpt":0.30872531424017635,"score_spread":0.2794324254475,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2046774147","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.91618985,0.022015732,0.061238967,0.000022145457,0.000023544135,0.00024369526,0.0002517831,0.000007453931,0.0000068389986],"genre_scores_gemma":[0.87253153,0.0028045217,0.12448001,0.0000048962115,0.000046841975,0.0000144768455,0.000105273735,0.0000084124395,0.0000040267164],"study_design_codex":"design_other","study_design_gemma":"observational","domain_scores_codex":[0.99909383,0.000083181854,0.00036954603,0.00013356666,0.0001439441,0.00017591917],"domain_scores_gemma":[0.9991302,0.00021671224,0.00033875374,0.00011483267,0.00011535835,0.000084140214],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00088688533,0.00010004825,0.00031881282,0.00005400482,0.000059595306,0.0000021919006,0.00002797902,0.00006556175,0.0000036868944],"category_scores_gemma":[0.00045094232,0.000079329686,0.000056864224,0.00008111007,0.000062461215,0.00004785171,0.00005109371,0.000058101676,1.6323833e-7],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0023021332,0.00037882553,0.060889754,0.0026959477,0.00069941016,0.0000010002085,0.012996155,0.00017797318,0.26924092,0.0014009256,0.00007332031,0.64914364],"study_design_scores_gemma":[0.0011646262,0.00013079528,0.86382365,0.00022504297,0.0004044924,0.000006389322,0.0009569229,0.0010770197,0.13115823,0.0005074179,0.00044266565,0.00010273245],"about_ca_topic_score_codex":0.000232558,"about_ca_topic_score_gemma":0.000029602872,"teacher_disagreement_score":0.80293393,"about_ca_system_score_codex":0.00002060002,"about_ca_system_score_gemma":0.00004278981,"threshold_uncertainty_score":0.3234971},"labels":[],"label_agreement":null},{"id":"W2046880458","doi":"10.1016/s0378-1119(99)00499-0","title":"Cloning of three novel neuronal Cdk5 activator binding proteins","year":2000,"lang":"en","type":"article","venue":"Gene","topic":"Epigenetics and DNA Methylation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":110,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"Hong Kong University of Science and Technology","keywords":"Biology; Activator (genetics); Protein subunit; Cell biology; Fusion protein; Molecular biology; Biochemistry; Caenorhabditis elegans; Gene; Recombinant DNA","score_opus":0.01829239596560477,"score_gpt":0.2445805283477466,"score_spread":0.22628813238214182,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2046880458","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9935081,0.00034545295,0.004670583,0.000036795074,0.000058792622,0.00012756634,0.000022490398,0.000006104078,0.001224129],"genre_scores_gemma":[0.99381703,0.000089276684,0.0053378353,0.000027465345,0.00019097526,0.000010040434,0.00006134163,0.000016877906,0.00044914347],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9993912,0.000013271818,0.000146923,0.00019773454,0.000103879815,0.00014701103],"domain_scores_gemma":[0.9996589,0.0000051250645,0.0000568972,0.00020219131,0.000033447322,0.000043443943],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009485646,0.00008643194,0.00008514738,0.000024492276,0.000050080173,0.000008573634,0.000098360884,0.00008273017,0.000097519216],"category_scores_gemma":[0.000022656097,0.000085804764,0.00005393353,0.000065661276,0.000028854585,0.0000021646529,0.00003373297,0.000047979804,0.000008912669],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000033098277,0.000037796613,0.001846721,0.00000592978,0.000016291364,3.1657595e-7,0.000012440576,0.00032770724,0.98738074,0.00001884967,0.000013062884,0.010307072],"study_design_scores_gemma":[0.000284062,0.0001565211,0.009057392,0.000005853502,0.000006953777,0.0000013419038,0.0000027711296,0.00008730136,0.98089975,0.000042885407,0.009360818,0.00009434815],"about_ca_topic_score_codex":0.000017091097,"about_ca_topic_score_gemma":0.000010857803,"teacher_disagreement_score":0.010212723,"about_ca_system_score_codex":0.0000052614814,"about_ca_system_score_gemma":0.00003967603,"threshold_uncertainty_score":0.34990168},"labels":[],"label_agreement":null},{"id":"W2047736520","doi":"10.1016/s0378-1119(03)00671-1","title":"Plastid-derived Type II fatty acid biosynthetic enzymes in chromists","year":2003,"lang":"en","type":"article","venue":"Gene","topic":"Genomics and Phylogenetic Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":39,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canadian Institute for Advanced Research; University of British Columbia","funders":"Canadian Institutes of Health Research","keywords":"Plastid; Biology; Endosymbiosis; Enzyme; Biosynthesis; Biochemistry; Apicoplast; Acyl carrier protein; Apicomplexa; Cyanobacteria; Fatty acid synthase; Gene; Genetics; Bacteria; Plasmodium falciparum; Chloroplast","score_opus":0.010700105915388006,"score_gpt":0.2198940532238454,"score_spread":0.2091939473084574,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2047736520","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9897768,0.0076401993,0.00007567002,0.000055857694,0.0002719025,0.00010547678,0.000012858487,0.0000035754624,0.002057691],"genre_scores_gemma":[0.9971423,0.0006708772,0.0017265328,0.00012819134,0.00008282112,0.000011816847,0.000017090813,0.0000184884,0.00020189078],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99919647,0.00004018746,0.00015264947,0.00029952492,0.000060464346,0.00025071594],"domain_scores_gemma":[0.99960494,0.000006208529,0.000038660233,0.00025670324,0.000039946975,0.00005355687],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009182962,0.00014702501,0.00014161361,0.00003264453,0.00008504155,0.000008715978,0.00011473129,0.000097911376,0.000049498256],"category_scores_gemma":[0.000081173486,0.00014158744,0.000048010814,0.00008420699,0.000056669523,3.6895898e-7,0.00009243716,0.000047114943,0.000020593638],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00002556223,0.000043286822,0.0018514266,0.0000050553285,0.000031418094,0.000003043643,0.00007152732,0.00006947329,0.9970874,0.000057236077,0.00040962026,0.0003449268],"study_design_scores_gemma":[0.000416864,0.00019005658,0.010157323,0.0000042741053,0.000008097706,0.000012616425,0.000035574198,0.0000059354065,0.9663249,0.00005290432,0.022618573,0.00017285251],"about_ca_topic_score_codex":0.000008369044,"about_ca_topic_score_gemma":0.0000369347,"teacher_disagreement_score":0.030762495,"about_ca_system_score_codex":0.000011919492,"about_ca_system_score_gemma":0.000057718702,"threshold_uncertainty_score":0.5773768},"labels":[],"label_agreement":null},{"id":"W2047756488","doi":"10.1016/j.gene.2005.09.016","title":"Independent expansion of the keratin gene family in teleostean fish and mammals: An insight from phylogenetic analysis and radiation hybrid mapping of keratin genes in zebrafish","year":2005,"lang":"en","type":"article","venue":"Gene","topic":"Skin and Cellular Biology Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":39,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ontario Genomics; University of Ottawa","funders":"Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research","keywords":"Biology; Keratin; Gene; Zebrafish; Genetics; Keratin 6A; Keratin 8; Gene family; Keratin 5; Gene duplication; Genome; Gene cluster; Intermediate filament; Cytoskeleton; Cell","score_opus":0.010843424469603208,"score_gpt":0.23470010860290547,"score_spread":0.22385668413330226,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2047756488","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99313605,0.006194129,0.00026234915,0.00009296836,0.000023947672,0.00021004061,0.00005487421,0.0000018537802,0.000023776296],"genre_scores_gemma":[0.9967081,0.0019499892,0.0008786492,0.00011796105,0.0000794174,0.000013956702,0.00022318568,0.0000100961515,0.000018645937],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.998666,0.00028636403,0.00036013385,0.00037379525,0.00013768864,0.00017601208],"domain_scores_gemma":[0.999449,0.000020164825,0.00011301759,0.0003227555,0.00004551662,0.000049509115],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00032522882,0.00012925225,0.00024617583,0.00016875032,0.000038480306,0.000013742681,0.00015260886,0.00014057547,0.0000095893465],"category_scores_gemma":[0.000035935096,0.00010886774,0.000053072526,0.00025249462,0.00009901878,0.000006233731,0.00015102387,0.00009203378,2.2496215e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00003503085,0.000042988482,0.19649477,0.0000059752274,0.00005573107,0.0000030231784,0.00016617695,0.00022109847,0.78078777,7.1550653e-7,0.000008918776,0.022177804],"study_design_scores_gemma":[0.00046682346,0.0000626232,0.38508734,0.000006078126,0.000017895603,0.000004197999,0.00009449143,0.0008817632,0.6132073,0.000010733831,0.00008853024,0.000072206974],"about_ca_topic_score_codex":0.00032972533,"about_ca_topic_score_gemma":0.0014332574,"teacher_disagreement_score":0.18859257,"about_ca_system_score_codex":0.000013435734,"about_ca_system_score_gemma":0.000057421068,"threshold_uncertainty_score":0.44394976},"labels":[],"label_agreement":null},{"id":"W2050442804","doi":"10.1016/s0378-1119(01)00651-5","title":"Discovery and mapping of ten novel G protein-coupled receptor genes","year":2001,"lang":"en","type":"article","venue":"Gene","topic":"Neuropeptides and Animal Physiology","field":"Neuroscience","cited_by":214,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Centre for Addiction and Mental Health; University of Toronto","funders":"Canadian Institutes of Health Research","keywords":"Pseudogene; Biology; GenBank; Gene; G protein-coupled receptor; Genetics; Subfamily; Galanin; Receptor; Genome; Neuropeptide","score_opus":0.039088276598635265,"score_gpt":0.24190466695386836,"score_spread":0.2028163903552331,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2050442804","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99913245,0.00006641172,0.00016562513,0.00008479241,0.000063362946,0.00014299936,0.000011206308,0.000018906914,0.00031421703],"genre_scores_gemma":[0.99783033,0.00016753489,0.00056876574,0.00024386132,0.00010537742,0.000008147249,8.933002e-7,0.0000114701215,0.00106362],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99937624,0.000017041508,0.00012809038,0.0002464499,0.00007421655,0.00015796827],"domain_scores_gemma":[0.99974144,0.000028207856,0.00006263879,0.00012464581,0.000012623947,0.000030425923],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000032954904,0.00007848805,0.00012347035,0.000032640124,0.00005195439,0.000017400187,0.000104072766,0.000022152994,0.000022313636],"category_scores_gemma":[0.000053635038,0.000063508756,0.000029067984,0.00012218527,0.000083342784,0.00010885266,0.000097020806,0.000046000183,0.000015535345],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000032797314,0.000034843706,0.00022285219,0.000011911902,0.0000015861422,0.0000046283903,0.000021769147,0.0000070494575,0.99788064,0.00034406318,0.000018630159,0.0014192325],"study_design_scores_gemma":[0.00021800169,0.00011232873,0.0037757568,0.000012824904,0.0000018927045,0.000018980802,0.000013316595,0.00013591278,0.9918216,0.00011769151,0.0036894085,0.0000823241],"about_ca_topic_score_codex":0.000020001262,"about_ca_topic_score_gemma":0.0000010516728,"teacher_disagreement_score":0.006059075,"about_ca_system_score_codex":0.0000039236074,"about_ca_system_score_gemma":0.000011126536,"threshold_uncertainty_score":0.2589812},"labels":[],"label_agreement":null},{"id":"W2050443616","doi":"10.1016/j.gene.2006.12.012","title":"Structure of the bovine VASAP-60/PRKCSH gene, functional analysis of the promoter, and gene expression analysis","year":2006,"lang":"en","type":"article","venue":"Gene","topic":"Mechanisms of cancer metastasis","field":"Biochemistry, Genetics and Molecular Biology","cited_by":8,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Biology; Molecular biology; Promoter; YY1; Exon; Chromatin immunoprecipitation; Gene; TATA box; Repressor; Gene expression; Intron; Primer extension; Messenger RNA; CAAT box; RNA splicing; Alternative splicing; Transcription factor; RNA; Genetics","score_opus":0.006124091897281157,"score_gpt":0.21142891304053338,"score_spread":0.20530482114325221,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2050443616","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9901349,0.0013141782,0.007736508,0.00008843878,0.0001022145,0.00013861163,0.00043997364,0.000003201339,0.000041987718],"genre_scores_gemma":[0.995266,0.000053513235,0.0039448882,0.00007600428,0.00014372641,0.000005847457,0.00023223311,0.0000119649885,0.00026577277],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9987936,0.00010243717,0.00030345365,0.00034136683,0.00030962622,0.00014953974],"domain_scores_gemma":[0.99874616,0.000007960184,0.0002889346,0.00078154344,0.00014007969,0.00003529858],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012590628,0.000150809,0.00029773675,0.00011395612,0.000086469074,0.0000098021665,0.00027885468,0.00011795187,0.00013947251],"category_scores_gemma":[0.000023794397,0.00009148151,0.00038592555,0.00082797837,0.00009320106,0.000003349678,0.00023880882,0.00006153478,1.618211e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000048346777,0.00003117526,0.009600561,0.000010481653,0.0013806941,2.3255707e-7,0.00001057752,0.0047639417,0.9835186,0.000014529966,0.00031853357,0.00030233953],"study_design_scores_gemma":[0.00023178881,0.000039510556,0.09719176,0.0000026981136,0.0024117834,0.0000019951967,0.0000064534283,0.00023377936,0.8992233,0.0001314219,0.00043708406,0.00008838361],"about_ca_topic_score_codex":0.00006526167,"about_ca_topic_score_gemma":0.0002561138,"teacher_disagreement_score":0.08759119,"about_ca_system_score_codex":0.000010550073,"about_ca_system_score_gemma":0.000054351807,"threshold_uncertainty_score":0.37305078},"labels":[],"label_agreement":null},{"id":"W2050669866","doi":"10.1016/j.gene.2014.02.016","title":"Prokaryotic overexpression of TEV–rhGH and characterization of its polyclonal antibody","year":2014,"lang":"en","type":"article","venue":"Gene","topic":"Virus-based gene therapy research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":9,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Atomic Energy Commission of Syria; World Anti-Doping Agency","keywords":"Polyclonal antibodies; Biology; Tobacco etch virus; Recombinant DNA; Affinity chromatography; Molecular biology; Plasmid; Escherichia coli; Monoclonal antibody; Inclusion bodies; Antibody; Biochemistry; Gene; Enzyme; Virology; Virus; Plant virus; Genetics","score_opus":0.010110523941735058,"score_gpt":0.28309009596300594,"score_spread":0.2729795720212709,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2050669866","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9990309,0.00028005688,0.00035222058,0.000041831234,0.000027001586,0.00013136538,0.00003204169,0.0000029571047,0.00010162784],"genre_scores_gemma":[0.99902564,0.00028516856,0.00013817256,0.000037785154,0.00009416042,0.00000419739,0.00023260116,0.0000121734165,0.00017007698],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99939466,0.000061847546,0.00013927872,0.00016309039,0.00012627286,0.000114872804],"domain_scores_gemma":[0.99960625,0.0000053570134,0.00008046813,0.0001922263,0.00007483266,0.000040865776],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014841613,0.00007163805,0.00010609422,0.00003640071,0.000022575061,0.0000038600697,0.00008860331,0.00007150731,0.000025159929],"category_scores_gemma":[0.000028389086,0.000064814674,0.000027435952,0.00005064053,0.000048661783,0.0000028788706,0.000070647235,0.000031828626,0.0000017392805],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0004749132,0.00004209903,0.0030185545,0.000053583615,0.000016564165,1.1862039e-7,0.000016897504,0.0000046872715,0.99325275,0.00001052905,0.000012296639,0.0030970115],"study_design_scores_gemma":[0.0003865902,0.0010355001,0.020089509,0.000024786861,0.0000042884276,0.0000026270454,0.0000018475238,0.0001710371,0.9778351,0.000012511702,0.00037273936,0.000063451145],"about_ca_topic_score_codex":0.0000020404273,"about_ca_topic_score_gemma":0.0000010837913,"teacher_disagreement_score":0.017070955,"about_ca_system_score_codex":0.0000023224386,"about_ca_system_score_gemma":0.00003367864,"threshold_uncertainty_score":0.26430658},"labels":[],"label_agreement":null},{"id":"W2051525197","doi":"10.1016/j.gene.2009.06.020","title":"Endogenous retroviral LTRs as promoters for human genes: A critical assessment","year":2009,"lang":"en","type":"review","venue":"Gene","topic":"Chromosomal and Genetic Variations","field":"Agricultural and Biological Sciences","cited_by":318,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia; BC Cancer Agency","funders":"BC Cancer Agency; Canadian Institutes of Health Research","keywords":"Biology; Exaptation; Endogenous retrovirus; Long terminal repeat; Promoter; Gene; Genetics; Regulation of gene expression; Regulatory sequence; Transposable element; Gene expression; Function (biology); Genome","score_opus":0.10735577640006257,"score_gpt":0.358798363997557,"score_spread":0.25144258759749444,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2051525197","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00066459936,0.9953267,0.000020288386,0.00038171755,0.0002687925,0.0014928184,0.0005033229,0.00008619927,0.0012555551],"genre_scores_gemma":[0.0014641535,0.99207485,0.0018570311,0.0001767696,0.0017842354,0.00045298834,0.0016582106,0.0000052623154,0.0005265179],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9981426,0.000113663584,0.00047627304,0.000568332,0.00023563278,0.0004634895],"domain_scores_gemma":[0.9992929,0.00020461711,0.00013975406,0.00012362366,0.00007268293,0.00016641669],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00018204226,0.00034772113,0.0008020989,0.000019148792,0.00043549397,0.00011436011,0.0003982025,0.0002937224,0.00040232058],"category_scores_gemma":[0.00004951747,0.00013332863,0.0006084416,0.00021932441,0.000049163733,0.00003328551,0.00007096067,0.00016786683,0.000066966175],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000013140193,0.00013758738,0.0000020233522,0.00038276,0.00004005729,0.000009755332,0.00000794154,1.2848943e-7,0.006230964,0.0012022384,0.00008433431,0.9919009],"study_design_scores_gemma":[0.00009709116,0.0011420626,0.00006303912,0.00044144355,0.0003981811,0.000118125376,0.0000105168,0.0000020284806,0.00007460183,0.003579744,0.9936658,0.00040736157],"about_ca_topic_score_codex":0.00005784425,"about_ca_topic_score_gemma":0.00006119257,"teacher_disagreement_score":0.9935815,"about_ca_system_score_codex":0.000099976896,"about_ca_system_score_gemma":0.000088211134,"threshold_uncertainty_score":0.5436984},"labels":[],"label_agreement":null},{"id":"W2052412600","doi":"10.1016/j.gene.2014.04.011","title":"Characterization of a homolog of DEAD-box RNA helicases in Toxoplasma gondii as a marker of cytoplasmic mRNP stress granules","year":2014,"lang":"en","type":"article","venue":"Gene","topic":"Toxoplasma gondii Research Studies","field":"Immunology and Microbiology","cited_by":16,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Windsor","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Biology; Toxoplasma gondii; DEAD box; Cytoplasm; Helicase; Stress granule; RNA; Genetics; Cell biology; Virology; Messenger RNA; Gene; Antibody; Translation (biology)","score_opus":0.008975364462827758,"score_gpt":0.24140603318648593,"score_spread":0.23243066872365817,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2052412600","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9978902,0.00059998175,0.00011788767,0.00010031954,0.00014850778,0.0002876673,0.0004059453,0.000017829007,0.0004317144],"genre_scores_gemma":[0.9984218,0.00047565036,0.00020369439,0.000019593559,0.000013382297,0.000039210125,0.00019091394,0.000015793223,0.0006199485],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99844587,0.00034008452,0.00054271554,0.000260545,0.00007588808,0.00033489394],"domain_scores_gemma":[0.9988538,0.0003196504,0.00031870563,0.00033119836,0.0001558661,0.000020774547],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00033208265,0.0001747634,0.00056917686,0.00032963784,0.000045524674,0.0000029238197,0.00025179514,0.0002102141,0.0001905118],"category_scores_gemma":[0.00038041713,0.00015730127,0.00009601321,0.00025579002,0.00044230226,0.000063316176,0.00018334149,0.00017159629,0.000049826198],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00045244725,0.0002474744,0.025954768,0.00017135791,0.00014391934,0.00000438025,0.00046765324,0.000010083654,0.96878314,0.0003319345,0.000052020914,0.0033808146],"study_design_scores_gemma":[0.0011656677,0.0004053339,0.08709639,0.00010384558,0.000024469256,0.000025589417,0.00010874282,0.000007980416,0.91014886,0.00011994649,0.0006807002,0.00011248774],"about_ca_topic_score_codex":0.00023737166,"about_ca_topic_score_gemma":0.00021756126,"teacher_disagreement_score":0.06114162,"about_ca_system_score_codex":0.000023578232,"about_ca_system_score_gemma":0.00006851717,"threshold_uncertainty_score":0.64145595},"labels":[],"label_agreement":null},{"id":"W2052907613","doi":"10.1016/j.gene.2013.12.022","title":"Characterization and expression analysis of WOX5 genes from wheat and its relatives","year":2013,"lang":"en","type":"article","venue":"Gene","topic":"Plant Molecular Biology Research","field":"Agricultural and Biological Sciences","cited_by":39,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Agriculture and Agri-Food Canada","funders":"National Natural Science Foundation of China","keywords":"Biology; Aegilops tauschii; Genetics; Gene; Aegilops; Gene family; Open reading frame; Genome; Sequence analysis; Peptide sequence","score_opus":0.019942323436623624,"score_gpt":0.2243460243844886,"score_spread":0.20440370094786497,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2052907613","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99890745,0.0006561084,0.000008616749,0.00022011102,0.0000073327305,0.00007555988,0.0001021632,0.0000059175204,0.000016719732],"genre_scores_gemma":[0.99878734,0.0005509261,0.00006222034,0.000019140456,0.00002180947,0.0000058418914,0.0004446487,2.1544464e-7,0.00010785563],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9996005,0.00006257089,0.000070173046,0.00013850069,0.00005549022,0.000072753166],"domain_scores_gemma":[0.99982166,0.00005826449,0.0000322759,0.000020675601,0.000030258985,0.000036847836],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00004390535,0.000042779877,0.000101679936,0.000016029548,0.000044712302,0.000013291101,0.00004482161,0.000054448843,0.00018732718],"category_scores_gemma":[0.000015240512,0.000015401316,0.000016768248,0.00015152046,0.000026605418,0.000057236626,0.00005717783,0.000024776045,0.0000044848393],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000046838236,0.0000056985286,0.05790232,6.6746003e-7,0.00003248708,3.217895e-7,0.00003991816,2.6573073e-7,0.92854,0.0000020879547,0.000003849263,0.013467732],"study_design_scores_gemma":[0.00001919873,0.000024308765,0.6068425,0.0000023631037,0.000015040697,2.6421006e-7,0.000015558831,0.00023495751,0.3927536,0.000015575473,0.00005171653,0.000024900315],"about_ca_topic_score_codex":0.00008430913,"about_ca_topic_score_gemma":0.000027803031,"teacher_disagreement_score":0.5489402,"about_ca_system_score_codex":0.0000014677266,"about_ca_system_score_gemma":9.2363416e-7,"threshold_uncertainty_score":0.20511013},"labels":[],"label_agreement":null},{"id":"W2054541701","doi":"10.1016/j.gene.2007.07.016","title":"Generation of ESTs in Vitis vinifera wine grape (Cabernet Sauvignon) and table grape (Muscat Hamburg) and discovery of new candidate genes with potential roles in berry development","year":2007,"lang":"en","type":"article","venue":"Gene","topic":"Horticultural and Viticultural Research","field":"Agricultural and Biological Sciences","cited_by":59,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"BC Cancer Agency; Canada's Michael Smith Genome Sciences Centre; University of British Columbia","funders":"Natural Sciences and Engineering Research Council of Canada; Genome British Columbia; Canada's Michael Smith Genome Sciences Centre; Genome Canada","keywords":"Biology; Berry; Expressed sequence tag; Wine grape; UniGene; Table grape; Vitis vinifera; Candidate gene; cDNA library; Gene; KEGG; Wine; Botany; Genetics; Complementary DNA; Cultivar; Transcriptome; Gene expression; Food science","score_opus":0.023564732286540064,"score_gpt":0.24120892072698377,"score_spread":0.2176441884404437,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2054541701","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9982725,0.001145782,0.000011561614,0.00030542247,0.000021463873,0.00019975835,0.000016602153,0.0000055398996,0.000021412],"genre_scores_gemma":[0.9983549,0.00063096185,0.00046329456,0.000024704636,0.00010083134,0.000006090676,0.00011199789,0.0000011723105,0.00030602253],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99884707,0.000032240565,0.00032340028,0.00025996842,0.0002457155,0.00029160632],"domain_scores_gemma":[0.9996923,0.000033775745,0.00007698571,0.00003435359,0.000059100556,0.00010349111],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00023473734,0.00013816624,0.00023310735,0.000034720626,0.000059723654,0.00004345319,0.00008053436,0.00006961413,0.00002436289],"category_scores_gemma":[0.000012185339,0.000052228665,0.000019944395,0.00032675613,0.000079889985,0.0002447412,0.00007055075,0.00007169384,5.389817e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009648674,0.000049015627,0.052677657,0.000013416008,0.00001107992,0.000014388102,0.00023048041,0.000027701792,0.8620278,0.000014102353,0.000022169465,0.08481568],"study_design_scores_gemma":[0.00029908965,0.00018967252,0.6952342,0.00003984405,0.000005657007,0.000016568194,0.00018568635,0.000044671368,0.30367872,0.000024956264,0.00016848333,0.000112488735],"about_ca_topic_score_codex":0.0042279065,"about_ca_topic_score_gemma":0.038435273,"teacher_disagreement_score":0.6425565,"about_ca_system_score_codex":0.00002244374,"about_ca_system_score_gemma":0.000027490358,"threshold_uncertainty_score":0.9791108},"labels":[],"label_agreement":null},{"id":"W2054583972","doi":"10.1016/j.gene.2006.12.039","title":"Characterization of a novel alternatively spliced human transcript encoding an N-terminally truncated Vps24 protein that suppresses the effects of Bax in an ESCRT independent manner in yeast","year":2007,"lang":"en","type":"article","venue":"Gene","topic":"Cell death mechanisms and regulation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":18,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"","keywords":"Biology; ESCRT; Mutant; Yeast; Gene; Complementary DNA; Alternative splicing; RNA splicing; Cell biology; Saccharomyces cerevisiae; Molecular biology; Messenger RNA; Genetics; RNA","score_opus":0.016048125018784158,"score_gpt":0.2596846461337617,"score_spread":0.24363652111497752,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2054583972","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9950727,0.00003687777,0.00426171,0.000008611861,0.000064029664,0.0005159451,0.000013291374,0.0000035079988,0.000023274986],"genre_scores_gemma":[0.9993327,0.000015922833,0.00022517779,0.000014714361,0.000054461558,0.000022053015,0.0002450376,0.000014764785,0.000075170276],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9992038,0.000052482774,0.00024293041,0.0002176764,0.00013628547,0.0001468047],"domain_scores_gemma":[0.9995926,0.0000037626737,0.00013610393,0.00018796635,0.00004825078,0.000031292548],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00029051298,0.00010861908,0.00013232794,0.00009401112,0.00002554651,0.000009860306,0.0001509821,0.00011199303,0.000004456099],"category_scores_gemma":[0.000007740196,0.000087131775,0.000034896482,0.00008963151,0.000030352767,0.000014657109,0.000026279642,0.00005766143,1.0081836e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013112665,0.00026261242,0.0014312573,0.00006972681,0.00000997697,0.000005634895,0.0005872242,0.00003596174,0.9957781,0.00009120969,1.0418121e-7,0.0015970911],"study_design_scores_gemma":[0.0008655718,0.00031685852,0.1581122,0.00005582332,0.000007690979,0.0000038237035,0.000061252504,0.00020926332,0.8402524,0.00001649132,0.000015556134,0.000083079576],"about_ca_topic_score_codex":0.00011147894,"about_ca_topic_score_gemma":0.0006740133,"teacher_disagreement_score":0.15668094,"about_ca_system_score_codex":0.000012597261,"about_ca_system_score_gemma":0.000019856405,"threshold_uncertainty_score":0.35531306},"labels":[],"label_agreement":null},{"id":"W2055480678","doi":"10.1016/j.gene.2015.04.055","title":"Differential recognition of the ORF2 region in a complete genome sequence of porcine circovirus type 2 (PCV2) isolated from boar bone marrow in Korea","year":2015,"lang":"en","type":"article","venue":"Gene","topic":"Animal Virus Infections Studies","field":"Agricultural and Biological Sciences","cited_by":12,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Animal and Plant Quarantine Agency; Ministry of Agriculture, Food and Rural Affairs; Ontario Ministry of Agriculture, Food and Rural Affairs","keywords":"Porcine circovirus; Biology; Phylogenetic tree; Wild boar; Virology; Genome; Genetics; Coding region; Circovirus; Homologous recombination; Homology (biology); Homologous chromosome; Capsid; Virus; Gene","score_opus":0.12001362919349484,"score_gpt":0.24208358642619107,"score_spread":0.12206995723269623,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2055480678","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9989756,0.00021406739,0.000004990958,0.0001985962,0.00011113173,0.00014809196,0.00013404274,0.000010552173,0.00020297854],"genre_scores_gemma":[0.9996713,0.000095128715,0.000036105856,0.000033880577,0.00005497819,0.0000052181135,0.00007532187,8.1664666e-7,0.000027267815],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99928707,0.000089818765,0.00024137819,0.00015167777,0.00010944763,0.00012059209],"domain_scores_gemma":[0.9996568,0.000039954153,0.00012885264,0.00005480722,0.00009496559,0.000024640389],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00008340759,0.000079328376,0.00018723749,0.000019189605,0.000039439306,0.0000042548304,0.000109646404,0.000058488604,0.00007470355],"category_scores_gemma":[0.00006461368,0.000031720283,0.000037300182,0.0004593396,0.00008441625,0.00004046055,0.00008405111,0.00007920035,0.00001087027],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014057082,0.000061055354,0.04762182,0.0000026282132,0.0000072273247,0.000002777821,0.00012628263,0.00000717972,0.9502289,0.0000055898117,0.000028365179,0.001767572],"study_design_scores_gemma":[0.00040380028,0.00040805244,0.9805897,0.00004719712,0.000015568581,0.0000062014983,0.00016404738,0.000112362766,0.016418958,0.0012705872,0.000441067,0.00012244613],"about_ca_topic_score_codex":0.0071957107,"about_ca_topic_score_gemma":0.007524513,"teacher_disagreement_score":0.93381,"about_ca_system_score_codex":0.00004370753,"about_ca_system_score_gemma":0.000008532638,"threshold_uncertainty_score":0.99941546},"labels":[],"label_agreement":null},{"id":"W2055775644","doi":"10.1016/j.gene.2004.07.020","title":"Identification of a novel aminergic-like G protein-coupled receptor in the cnidarian Renilla koellikeri","year":2004,"lang":"en","type":"article","venue":"Gene","topic":"Receptor Mechanisms and Signaling","field":"Biochemistry, Genetics and Molecular Biology","cited_by":12,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Université de Montréal; Hôpital Saint-Luc","funders":"","keywords":"Biology; Receptor; Extracellular; Complementary DNA; G protein-coupled receptor; Transmembrane domain; Molecular biology; Amino acid; Cell biology; Biochemistry; Gene","score_opus":0.010258098508852271,"score_gpt":0.22867556194222058,"score_spread":0.21841746343336832,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2055775644","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9687315,0.00022783209,0.030271333,0.00022322414,0.00013675094,0.00032200417,0.000012625744,0.0000049086616,0.00006979912],"genre_scores_gemma":[0.996344,0.00004166624,0.0029804974,0.000087518034,0.00013943664,0.000056975652,0.00008989347,0.000013811239,0.00024623936],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9991605,0.000028952016,0.00028310713,0.0002345631,0.00013987918,0.00015295176],"domain_scores_gemma":[0.9994601,0.0000034353252,0.0001231505,0.000326821,0.000060197217,0.000026306656],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000374463,0.00010116279,0.00010543232,0.000036523063,0.000043887034,0.000018479099,0.00022016265,0.00010552045,0.000026367436],"category_scores_gemma":[0.000035456334,0.000078785815,0.00006514969,0.00013823977,0.00003200266,0.0000029831133,0.00003279087,0.0000569954,0.000006379691],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000033750377,0.000087290486,0.000010739294,0.000009018215,0.000011027215,6.142295e-7,0.0001409438,0.00075816433,0.9978794,0.0007953452,0.000034226163,0.00023952071],"study_design_scores_gemma":[0.00067830615,0.00012252723,0.00012189134,0.000012855024,0.0000057456487,0.0000052239716,0.00013137747,0.00010378498,0.99688375,0.00019509919,0.0016388698,0.00010058672],"about_ca_topic_score_codex":0.00007990431,"about_ca_topic_score_gemma":0.000044182154,"teacher_disagreement_score":0.02761244,"about_ca_system_score_codex":0.00001345393,"about_ca_system_score_gemma":0.00005360568,"threshold_uncertainty_score":0.32127923},"labels":[],"label_agreement":null},{"id":"W2056034210","doi":"10.1016/j.gene.2010.03.003","title":"Chitin disaccharide (GlcNAc)2 induces natural competence in Vibrio cholerae through transcriptional and translational activation of a positive regulatory gene tfoXVC","year":2010,"lang":"en","type":"article","venue":"Gene","topic":"Vibrio bacteria research studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":49,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Petroleum Technology Research Centre","keywords":"Biology; Gene; Vibrio cholerae; Transcription (linguistics); Chitin; Transcriptional regulation; Promoter; Regulatory sequence; Genetics; lac operon; Regulation of gene expression; Cell biology; Gene expression; Biochemistry; Bacteria","score_opus":0.010123289581486937,"score_gpt":0.25707956749902955,"score_spread":0.2469562779175426,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2056034210","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9981839,0.000463782,0.00031712375,0.0005212236,0.00010277173,0.0002002669,0.00010824913,0.00000509161,0.000097578704],"genre_scores_gemma":[0.99587756,0.00010640055,0.0034143254,0.000091117436,0.0001734564,0.000022693546,0.00027477278,0.0000110720885,0.00002860302],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99906987,0.00004502358,0.00020529682,0.00029356533,0.00019836593,0.00018789615],"domain_scores_gemma":[0.9996481,0.000020775022,0.000062434985,0.0001376389,0.00009258599,0.000038449063],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012856531,0.00013009227,0.00014977847,0.000048169288,0.000070625916,0.000014946549,0.00010815858,0.000104691964,0.000016964404],"category_scores_gemma":[0.00004212038,0.00012617622,0.000048773858,0.00008690472,0.000224165,0.000023947952,0.00004456868,0.0001805306,6.6561074e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015724672,0.000047599766,0.0034669964,0.000013240841,0.000042835323,9.2496526e-7,0.00039860874,0.000016409396,0.99472636,0.0002922201,0.000011331918,0.0008262121],"study_design_scores_gemma":[0.00045026324,0.000041281113,0.4244,0.000010389292,0.0000035143114,0.000007920973,0.000026253887,0.00002636836,0.5747111,0.00013961158,0.00010295452,0.00008038155],"about_ca_topic_score_codex":0.00006298953,"about_ca_topic_score_gemma":0.00014911717,"teacher_disagreement_score":0.420933,"about_ca_system_score_codex":0.000007718469,"about_ca_system_score_gemma":0.000088443754,"threshold_uncertainty_score":0.5145317},"labels":[],"label_agreement":null},{"id":"W2056366893","doi":"10.1016/s0378-1119(01)00332-8","title":"Cloning and characterization of Chinese hamster homologue of yeast DBF4 (ChDBF4)","year":2001,"lang":"en","type":"article","venue":"Gene","topic":"Fungal and yeast genetics research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":7,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Ottawa; Northeast Cancer Centre","funders":"Medical Research Council","keywords":"Biology; Molecular biology; Cell cycle; Chinese hamster; Cloning (programming); Cell biology; Cell; Genetics; Cell culture","score_opus":0.008527992340404618,"score_gpt":0.250097496256986,"score_spread":0.2415695039165814,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2056366893","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9986409,0.00035548687,0.00046722495,0.00004439708,0.000046104382,0.00006890861,0.000038163682,0.0000021299686,0.000336663],"genre_scores_gemma":[0.9983531,0.00049377803,0.00029253305,0.00002882879,0.00010075193,0.0000039743522,0.00015149893,0.000009464531,0.0005660229],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9995044,0.000024632753,0.00013146433,0.00014239407,0.00008303067,0.000114105955],"domain_scores_gemma":[0.99967057,0.000002751932,0.000052023264,0.00015861957,0.00007592972,0.00004009799],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00007672388,0.00006831921,0.00010002742,0.00003532447,0.000020048981,0.0000047043204,0.00007671303,0.00006929191,0.000022186143],"category_scores_gemma":[0.000019330968,0.000058569538,0.00002982936,0.0000766171,0.00006451227,0.0000018985364,0.00009766276,0.000033085682,0.0000024047933],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000063562606,0.00002924594,0.036460325,0.00002070219,0.000016599497,0.0000020121454,0.000052072715,0.000007303851,0.9613727,0.0000037158056,0.000010032748,0.0019617276],"study_design_scores_gemma":[0.00024263363,0.00015750746,0.14055304,0.0000064048654,0.0000036082097,0.000022260176,0.0000062250565,0.00006915523,0.8577704,0.000019234842,0.0010906447,0.000058882706],"about_ca_topic_score_codex":0.0000126794375,"about_ca_topic_score_gemma":0.000008494384,"teacher_disagreement_score":0.10409272,"about_ca_system_score_codex":0.0000018616217,"about_ca_system_score_gemma":0.000020257545,"threshold_uncertainty_score":0.23883966},"labels":[],"label_agreement":null},{"id":"W2056575484","doi":"10.1016/j.gene.2009.04.006","title":"Substitutional editing of Heterocapsa triquetra chloroplast transcripts and a folding model for its divergent chloroplast 16S rRNA","year":2009,"lang":"en","type":"article","venue":"Gene","topic":"Protist diversity and phylogeny","field":"Biochemistry, Genetics and Molecular Biology","cited_by":41,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Biology; Ribosomal RNA; Dinoflagellate; Chloroplast; RNA editing; Genetics; Ribosome; Gene; RNA; Botany","score_opus":0.022208016417844673,"score_gpt":0.2348647924922634,"score_spread":0.21265677607441874,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2056575484","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.95254505,0.000983528,0.045581408,0.000084441934,0.00014215082,0.00022946394,0.00033493768,0.000007691521,0.000091353075],"genre_scores_gemma":[0.99752617,0.00018049487,0.0016427133,0.0001446599,0.00023624688,0.000009808894,0.00014882354,0.000006945137,0.00010416364],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9992466,0.000011426618,0.00016324405,0.0002612903,0.00010563318,0.00021178203],"domain_scores_gemma":[0.9996617,0.000005801544,0.00006656253,0.000103629915,0.00008036325,0.00008194137],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000101779835,0.00012758226,0.00014466415,0.0000356079,0.00013892626,0.000011577137,0.00011322237,0.00011417751,0.0000062170825],"category_scores_gemma":[0.000026532372,0.00013616517,0.00009993257,0.000039372244,0.000044294753,0.000008130812,0.000035366622,0.000048703394,9.10236e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002206727,0.00006001191,0.0012456082,0.000039008566,0.000044912296,0.0000017869356,0.00012476771,0.0016009763,0.99516076,0.0003443487,0.00024907908,0.00090808433],"study_design_scores_gemma":[0.0013007099,0.00033718292,0.004522576,0.000020575751,0.000038426213,0.000019610254,0.000021941103,0.0072309254,0.9854912,0.0001787862,0.0006476091,0.00019042629],"about_ca_topic_score_codex":0.0000028218963,"about_ca_topic_score_gemma":0.000011932094,"teacher_disagreement_score":0.04498112,"about_ca_system_score_codex":0.000011093119,"about_ca_system_score_gemma":0.00003889387,"threshold_uncertainty_score":0.5552654},"labels":[],"label_agreement":null},{"id":"W2057070448","doi":"10.1016/j.gene.2013.04.074","title":"Indigenous and foreign Y-chromosomes characterize the Lingayat and Vokkaliga populations of Southwest India","year":2013,"lang":"en","type":"article","venue":"Gene","topic":"Forensic and Genetic Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":22,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"","keywords":"Haplotype; Biology; Biological dispersal; Gene flow; Haplogroup; Out of africa; Single-nucleotide polymorphism; Indigenous; Gene pool; Indian subcontinent; Genetic diversity; Evolutionary biology; Genetics; Gene; Population; Allele; Genetic variation; Ethnology; Ecology; Genotype; Demography","score_opus":0.016865798563410004,"score_gpt":0.25034456096228913,"score_spread":0.23347876239887913,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2057070448","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9976513,0.0016602214,0.000079000645,0.0001105171,0.000031323423,0.0002456752,0.000031015967,0.0000029474245,0.00018804445],"genre_scores_gemma":[0.99832964,0.00045647426,0.0006077724,0.00009663285,0.000098394674,0.000025437725,0.00009548761,0.000009993762,0.0002801533],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9994432,0.00002771413,0.00012547032,0.00015860432,0.00008365303,0.00016135785],"domain_scores_gemma":[0.9995996,0.000009304336,0.00004775446,0.00021150391,0.00007363921,0.000058242982],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000095245174,0.0000802496,0.00009234853,0.000023682669,0.00010398836,0.000026080676,0.000087338405,0.00007691037,0.000019944559],"category_scores_gemma":[0.000031822754,0.000055569337,0.000022153969,0.000052756517,0.00018053042,0.000002700929,0.000110525536,0.000047951627,0.000005209529],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000012355105,0.000020808984,0.08796956,0.000021304202,0.000044387994,9.032674e-7,0.0007811677,0.0000035799535,0.8960982,0.00011798423,0.0003232748,0.014606487],"study_design_scores_gemma":[0.00029794316,0.00023767554,0.7541404,0.000006919382,0.000014800693,0.000034973706,0.000266454,0.000025656922,0.24263917,0.00084809907,0.001368075,0.00011986508],"about_ca_topic_score_codex":0.00020830643,"about_ca_topic_score_gemma":0.00002157409,"teacher_disagreement_score":0.66617084,"about_ca_system_score_codex":0.0000020057007,"about_ca_system_score_gemma":0.00003499778,"threshold_uncertainty_score":0.22660518},"labels":[],"label_agreement":null},{"id":"W2059084988","doi":"10.1016/j.gene.2004.01.004","title":"Sensitive genetic biomarkers for determining apoptosis in the brown bullhead (Ameiurus nebulosus)","year":2004,"lang":"en","type":"article","venue":"Gene","topic":"Cell death mechanisms and regulation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":38,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Windsor","funders":"Water Research Foundation; Water Environment Research Foundation","keywords":"Biology; Apoptosis; Programmed cell death; Staurosporine; TUNEL assay; Xenobiotic; Cycloheximide; Molecular biology; Cell biology; Biochemistry; Protein kinase A; Kinase; Enzyme; Protein biosynthesis","score_opus":0.010780403063410412,"score_gpt":0.2381293110620643,"score_spread":0.2273489079986539,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2059084988","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97028756,0.00035419475,0.028384898,0.0002936237,0.00014878622,0.000360208,0.000012999644,0.000006785763,0.00015096512],"genre_scores_gemma":[0.9875691,0.00012918146,0.0114803,0.00038635047,0.0002087032,0.000051144674,0.00008666657,0.000017509801,0.00007107863],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99925494,0.000031651856,0.00015120654,0.00025896815,0.00008368553,0.00021952117],"domain_scores_gemma":[0.9996439,0.000012980581,0.00004913428,0.00022392187,0.000037301044,0.000032760137],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001559371,0.00011621074,0.00009043065,0.00003989138,0.00008648265,0.000021085223,0.00010605271,0.000115356925,0.0000026837142],"category_scores_gemma":[0.000022974826,0.000090630085,0.0000832125,0.000081620354,0.000035009754,0.0000018491369,0.00003219274,0.000035216646,0.000003810165],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000054042095,0.000029830726,0.0000762174,0.00000898449,0.000026107335,0.0000037627397,0.00017094004,0.0010152028,0.98176867,0.00004745678,0.00008519751,0.016713616],"study_design_scores_gemma":[0.001091982,0.00029865987,0.004702544,0.000013944925,0.00002749252,0.000045738947,0.00022929611,0.00025633382,0.9889714,0.00046527066,0.0037186164,0.00017867911],"about_ca_topic_score_codex":0.000042515585,"about_ca_topic_score_gemma":0.00005917512,"teacher_disagreement_score":0.017281527,"about_ca_system_score_codex":0.00001828224,"about_ca_system_score_gemma":0.00004273697,"threshold_uncertainty_score":0.36957878},"labels":[],"label_agreement":null},{"id":"W2059096365","doi":"10.1016/j.gene.2012.02.014","title":"Characterization of a Tigger1 element from the genome of the American mink (Neovison vison)","year":2012,"lang":"en","type":"article","venue":"Gene","topic":"Chromosomal and Genetic Variations","field":"Agricultural and Biological Sciences","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Nova Scotia Department of Agriculture","funders":"Canada Research Chairs","keywords":"Biology; American mink; Mink; Genome; Genetics; Zoology; Gene; Ecology","score_opus":0.013847900689076568,"score_gpt":0.1991196964113736,"score_spread":0.18527179572229702,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2059096365","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9972529,0.00008749274,0.000011306801,0.0022187768,0.000077328456,0.00011487752,0.00019347202,0.0000044339704,0.000039450988],"genre_scores_gemma":[0.9992656,0.000033641027,0.000080162295,0.00019339913,0.00028062082,0.0000067672827,0.000081576196,3.940985e-7,0.000057817877],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9995336,0.000049054983,0.00013267013,0.00006796972,0.00011307286,0.00010362358],"domain_scores_gemma":[0.999675,0.000045565237,0.00016554688,0.00006358261,0.000026690403,0.0000236425],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00007240442,0.00004806184,0.00008154883,0.0000018614007,0.00007004201,0.000005108902,0.00016479068,0.000014124966,0.00038883137],"category_scores_gemma":[0.000007625805,0.000012910101,0.00005301213,0.00014056289,0.000045582816,0.000020968639,0.000057540532,0.00002363362,0.000012617616],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000037916952,0.000042214797,0.040232148,5.6828395e-7,0.000008749807,1.0084614e-8,0.00021653017,8.414004e-7,0.94877476,0.000039203987,0.000008550994,0.0106726065],"study_design_scores_gemma":[0.000025158759,0.000040390838,0.8249775,0.0000020108141,0.000011246447,2.6726698e-7,0.00005538228,0.0000068522527,0.16867308,0.000042500742,0.006136282,0.000029279616],"about_ca_topic_score_codex":0.00039028493,"about_ca_topic_score_gemma":0.00014394923,"teacher_disagreement_score":0.7847454,"about_ca_system_score_codex":0.000006140287,"about_ca_system_score_gemma":0.000004895863,"threshold_uncertainty_score":0.42574307},"labels":[],"label_agreement":null},{"id":"W2059365420","doi":"10.1016/j.gene.2015.04.011","title":"Estimated carrier frequency of creatine transporter deficiency in females in the general population using functional characterization of novel missense variants in the SLC6A8 gene","year":2015,"lang":"en","type":"article","venue":"Gene","topic":"Muscle metabolism and nutrition","field":"Biochemistry, Genetics and Molecular Biology","cited_by":39,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"SickKids Foundation; University of Toronto; Hospital for Sick Children","funders":"National Heart, Lung, and Blood Institute","keywords":"Missense mutation; Biology; Population; Creatine; Genetics; In silico; Gene; Endocrinology; Mutation; Medicine","score_opus":0.06529028855040432,"score_gpt":0.2852120781290094,"score_spread":0.2199217895786051,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2059365420","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99614716,0.00030653627,0.0031199933,0.000053111013,0.0000654231,0.00019252034,0.00009294051,0.0000013359563,0.000020964648],"genre_scores_gemma":[0.9966258,0.00003407405,0.001981552,0.00005698909,0.000082121725,0.000010791832,0.0011989492,0.0000068352037,0.0000029107669],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99916464,0.00010297971,0.00032090017,0.00015051643,0.00014980248,0.00011117279],"domain_scores_gemma":[0.9996436,0.000005669846,0.00010634103,0.00016469782,0.000064362,0.00001530817],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004353338,0.00008406284,0.00012141435,0.00008073294,0.000017247316,0.000005393516,0.00008799363,0.00008342516,0.000004600129],"category_scores_gemma":[0.000031225078,0.000061013638,0.000029627561,0.00023887999,0.00002765854,0.000009873986,0.000007207606,0.000045238452,8.817458e-8],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007069063,0.00016821845,0.09038556,0.000013631857,0.0000026031869,0.0000023906132,0.00031068377,0.0012381669,0.90762645,0.00005154707,0.0000013344649,0.0001287122],"study_design_scores_gemma":[0.000966811,0.0000394778,0.9032999,0.000015980528,0.000012094068,0.000019546911,0.00005210426,0.0020277149,0.09344443,0.00005197346,0.0000055087526,0.000064416665],"about_ca_topic_score_codex":0.00060078007,"about_ca_topic_score_gemma":0.00020532522,"teacher_disagreement_score":0.81418204,"about_ca_system_score_codex":0.00000944366,"about_ca_system_score_gemma":0.000045452496,"threshold_uncertainty_score":0.24880639},"labels":[],"label_agreement":null},{"id":"W2059448438","doi":"10.1016/s0378-1119(00)00285-7","title":"Identification and characterization of the gltK gene encoding a membrane-associated glucose transport protein of Pseudomonas aeruginosa","year":2000,"lang":"en","type":"article","venue":"Gene","topic":"Bacterial Genetics and Biotechnology","field":"Biochemistry, Genetics and Molecular Biology","cited_by":31,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba","funders":"","keywords":"Biology; Open reading frame; ATP-binding cassette transporter; Gene; Mutant; Gene product; ORFS; Homology (biology); Genetics; Bacterial outer membrane; Molecular biology; Peptide sequence; Gene expression; Transporter; Escherichia coli","score_opus":0.005448052766377593,"score_gpt":0.193446107608281,"score_spread":0.1879980548419034,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2059448438","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9991544,0.00013112398,0.00007546841,0.00014620581,0.000058465426,0.00029332924,0.0001009471,0.000006694101,0.00003336394],"genre_scores_gemma":[0.9987146,0.0006083532,0.0001176956,0.000023895325,0.000040477884,0.000014630255,0.0001884591,0.00001081207,0.00028106367],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99926597,0.000040651597,0.00028128695,0.00020585276,0.00008756178,0.000118707],"domain_scores_gemma":[0.99947983,0.000001608286,0.00016912405,0.0002633118,0.00006365171,0.000022450342],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013367338,0.00009574424,0.00013393599,0.000025446876,0.000044837834,0.000005182661,0.00014818147,0.00020188368,0.000024002104],"category_scores_gemma":[0.000012123022,0.000079745,0.00005469943,0.00012132724,0.00010062476,0.0000028569273,0.00002891512,0.00004433721,7.6454756e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000051722276,0.000052135492,0.0005995439,0.000017978604,0.000029441531,2.907075e-7,0.000039110542,0.0000037753393,0.9951352,0.0000133472695,0.0000011867588,0.0040562944],"study_design_scores_gemma":[0.0003130818,0.000080408216,0.0340971,0.000013906633,0.000024113535,0.000005265767,0.000004206548,0.000020033183,0.9648127,0.000019803772,0.00052815414,0.000081232385],"about_ca_topic_score_codex":0.000018545772,"about_ca_topic_score_gemma":0.000016490734,"teacher_disagreement_score":0.033497557,"about_ca_system_score_codex":0.0000052356604,"about_ca_system_score_gemma":0.00003417634,"threshold_uncertainty_score":0.32519066},"labels":[],"label_agreement":null},{"id":"W2059739275","doi":"10.1016/j.gene.2015.04.029","title":"Transcriptomic profiling of peripheral blood CD4+ T-cells in asthmatics with and without depression","year":2015,"lang":"en","type":"article","venue":"Gene","topic":"Tryptophan and brain disorders","field":"Neuroscience","cited_by":17,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"St. Paul's Hospital; University of British Columbia","funders":"National Natural Science Foundation of China","keywords":"Transcriptome; Depression (economics); Asthma; Microarray; Biology; Gene expression profiling; Immunology; Pathophysiology; Microarray analysis techniques; Internal medicine; Gene; Gene expression; Endocrinology; Bioinformatics; Medicine; Genetics","score_opus":0.02673051618089305,"score_gpt":0.24630914381862098,"score_spread":0.21957862763772792,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2059739275","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99864316,0.00016028646,0.0004900571,0.000023039702,0.00004976682,0.00016663926,0.0000046072337,0.00001819589,0.00044426325],"genre_scores_gemma":[0.9944284,0.00001864652,0.00537494,0.00008403449,0.000010440107,0.0000055878904,6.2798614e-7,0.000011190047,0.00006611643],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9993835,0.00004241041,0.00012008063,0.00017775744,0.00014135151,0.00013491222],"domain_scores_gemma":[0.99976754,0.000012393806,0.00004038784,0.00010957144,0.000012268681,0.000057832367],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000075296106,0.000078667545,0.000118340926,0.00004235666,0.00001820189,0.000012559907,0.000080582686,0.000032297405,0.0000045732068],"category_scores_gemma":[0.000026009819,0.00006020375,0.000011648711,0.00011388713,0.000074175994,0.00006877515,0.000016021873,0.000064107386,0.0000011954501],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007620837,0.00007289254,0.013721026,0.00002447951,0.0000015461185,0.0000039137026,0.00097331457,0.00019790544,0.98434544,0.000023729819,0.000008082891,0.00055144087],"study_design_scores_gemma":[0.0018803551,0.00011323298,0.0015358014,0.000028156554,0.000004504925,0.000017101975,0.00021386695,0.0012985804,0.9947002,0.000098458826,0.000027498463,0.00008223292],"about_ca_topic_score_codex":0.000010957067,"about_ca_topic_score_gemma":0.000023883274,"teacher_disagreement_score":0.012185224,"about_ca_system_score_codex":0.000006089665,"about_ca_system_score_gemma":0.00003994881,"threshold_uncertainty_score":0.24550377},"labels":[],"label_agreement":null},{"id":"W2059904097","doi":"10.1016/j.gene.2014.09.011","title":"Tight, cell type-specific control of LNX expression in the nervous system, at the level of transcription, translation and protein stability","year":2014,"lang":"en","type":"article","venue":"Gene","topic":"RNA Research and Splicing","field":"Biochemistry, Genetics and Molecular Biology","cited_by":14,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"University of California, Davis; University of Toronto; Irish Research Council; Science Foundation Ireland","keywords":"Biology; Transcription (linguistics); Genetics; Transcription factor; Translation (biology); Cell biology; Computational biology; Messenger RNA; Gene","score_opus":0.042733175465908546,"score_gpt":0.24343198215144585,"score_spread":0.2006988066855373,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2059904097","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9888498,0.002134766,0.00834233,0.00010120043,0.000013949318,0.000366375,0.000021123884,0.0000012345588,0.00016920317],"genre_scores_gemma":[0.9996503,0.000050773608,0.00013188795,0.000009932195,0.000027356646,0.000016622524,0.0000150046,0.000004161274,0.00009396508],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9993161,0.00021650313,0.00015075655,0.00011624658,0.00011152597,0.00008885271],"domain_scores_gemma":[0.9996512,0.00001907296,0.000044490916,0.0002189485,0.000049245187,0.000017032002],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00055506476,0.000050891853,0.00008300931,0.000011894389,0.00004109467,0.0000045819916,0.000093153176,0.000049432627,0.0000050478116],"category_scores_gemma":[0.000011435506,0.000028329618,0.000028093622,0.000041671152,0.00005881,0.0000019623399,0.000009179836,0.00004110109,4.6839105e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00018869681,0.000021266618,0.0004126047,0.000073533534,0.0000027297326,1.1761312e-7,0.00017133646,0.000032429372,0.99746776,0.000015088103,0.000038420967,0.001576035],"study_design_scores_gemma":[0.00058565836,0.00014706308,0.004743944,0.000015188965,0.0000033659321,0.0000012875278,0.00012076223,0.00037686378,0.99261236,0.000008164845,0.0013530754,0.000032282616],"about_ca_topic_score_codex":0.000037346403,"about_ca_topic_score_gemma":0.00008167444,"teacher_disagreement_score":0.010800478,"about_ca_system_score_codex":0.0000055513724,"about_ca_system_score_gemma":0.000014034525,"threshold_uncertainty_score":0.11552482},"labels":[],"label_agreement":null},{"id":"W2061142666","doi":"10.1016/j.gene.2014.08.017","title":"Trp28Arg/Ile35Thr LHB gene variants are associated with elevated testosterone levels in women with polycystic ovary syndrome","year":2014,"lang":"en","type":"article","venue":"Gene","topic":"Ovarian function and disorders","field":"Medicine","cited_by":19,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"Conselho Nacional de Desenvolvimento Científico e Tecnológico","keywords":"Polycystic ovary; Biology; Dehydroepiandrosterone sulfate; hirsutism; Endocrinology; Luteinizing hormone; Internal medicine; Hyperandrogenism; Anovulation; Population; Linkage disequilibrium; Genotype; Androgen; Genetics; Haplotype; Hormone; Diabetes mellitus; Gene; Medicine; Insulin resistance","score_opus":0.016691911179204367,"score_gpt":0.21840566501248004,"score_spread":0.20171375383327567,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2061142666","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9952229,0.000095181545,0.0018549111,0.0007143975,0.00013116135,0.0004845271,0.000034345358,0.00018153284,0.0012810087],"genre_scores_gemma":[0.9944333,0.0000058602914,0.00083509553,0.0021869084,0.000055476106,0.00006858892,0.000084534244,0.00007380909,0.002256451],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9979821,0.00011464331,0.00034361373,0.00049496326,0.00042066528,0.00064401125],"domain_scores_gemma":[0.9988462,0.00007600185,0.00019157413,0.00046837138,0.000118949916,0.0002989344],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00037465492,0.0003114389,0.0005802616,0.00027286197,0.00008539684,0.000029497465,0.00011183694,0.00017674448,0.00055507856],"category_scores_gemma":[0.0002259349,0.0002418151,0.000029954017,0.0008172701,0.000084553154,0.000105780004,0.000033401368,0.00027554308,0.00013202502],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.047245108,0.00953733,0.5372893,0.0006524428,0.0052162316,0.008519298,0.006032878,0.0021556767,0.3596377,0.00023010357,0.0046801143,0.018803777],"study_design_scores_gemma":[0.011999971,0.0022552896,0.9823217,0.00026257115,0.00011754579,0.0005349992,0.00022980923,0.0004077869,0.0011203462,0.000067161964,0.00031581946,0.00036703813],"about_ca_topic_score_codex":0.000056954887,"about_ca_topic_score_gemma":0.00006044088,"teacher_disagreement_score":0.44503233,"about_ca_system_score_codex":0.00024512984,"about_ca_system_score_gemma":0.00020290408,"threshold_uncertainty_score":0.98609334},"labels":[],"label_agreement":null},{"id":"W2061286865","doi":"10.1016/j.gene.2006.01.027","title":"Evolutionary conservation and murine embryonic expression of the gene encoding the SERTA domain-containing protein CDCA4 (HEPP)","year":2006,"lang":"en","type":"article","venue":"Gene","topic":"Chromosomal and Genetic Variations","field":"Agricultural and Biological Sciences","cited_by":23,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"National Medical Research Council; National Health and Medical Research Council; Australian Research Council; University of Queensland; Australian Cancer Research Foundation","keywords":"Biology; Cell biology; Gene; Embryonic stem cell; Molecular biology; Genetics","score_opus":0.010972483719471382,"score_gpt":0.18745032640006093,"score_spread":0.17647784268058955,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2061286865","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99414784,0.00048184762,0.0000119249235,0.0047361935,0.000051321284,0.00027142462,0.000019511343,0.000013865671,0.00026607164],"genre_scores_gemma":[0.9987604,0.000010786959,0.0004920077,0.000095919415,0.00019366815,0.000028165237,0.000025671708,6.78028e-7,0.00039270576],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9993706,0.000071541435,0.00015252693,0.00014483379,0.00013565038,0.00012484536],"domain_scores_gemma":[0.9996974,0.00007138746,0.000100238554,0.0000679613,0.00004350885,0.000019530482],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013290587,0.00007441151,0.00007516341,0.0000044709486,0.00039211073,0.000018293675,0.00014020863,0.000043950397,0.000065475404],"category_scores_gemma":[0.0000182123,0.000022383749,0.000042776068,0.00016516395,0.00005893638,0.000040301096,0.00010219995,0.000053858257,0.000002122802],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00000933762,0.00001925547,0.013422328,0.000002526514,0.0000026230014,3.279153e-7,0.000053545475,0.000029622935,0.98515505,0.00059942016,0.000079008416,0.000626971],"study_design_scores_gemma":[0.00015226286,0.000063772204,0.64462924,0.000028113447,0.000008192132,0.000013577278,0.00012455067,0.00015493148,0.34718832,0.004862623,0.0026961667,0.00007825281],"about_ca_topic_score_codex":0.00053539133,"about_ca_topic_score_gemma":0.00052227604,"teacher_disagreement_score":0.6379667,"about_ca_system_score_codex":0.0000134072325,"about_ca_system_score_gemma":0.000013018782,"threshold_uncertainty_score":0.30158383},"labels":[],"label_agreement":null},{"id":"W2061805529","doi":"10.1016/j.gene.2009.04.026","title":"Molecular characterization and expression analysis of the porcine paraoxonase 3 (PON3) gene","year":2009,"lang":"en","type":"article","venue":"Gene","topic":"Paraoxonase enzyme and polymorphisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":43,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Agriculture and Agri-Food Canada; Université de Montréal","funders":"","keywords":"Biology; Paraoxonase; Single-nucleotide polymorphism; PON1; Gene; Exon; Genetics; Endocrinology; Internal medicine; Molecular biology; Oxidative stress; Genotype","score_opus":0.005827950376284042,"score_gpt":0.22474039376672475,"score_spread":0.21891244339044072,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2061805529","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99401927,0.0011098558,0.004401296,0.00019554936,0.00004452326,0.000086608954,0.0000582443,0.000004772479,0.000079860925],"genre_scores_gemma":[0.9980626,0.00019114258,0.00024539809,0.0006567603,0.00007717608,0.0000042415313,0.0004915163,0.0000065794493,0.00026460443],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9993617,0.000048072714,0.00015803051,0.0002082428,0.00010318285,0.000120791265],"domain_scores_gemma":[0.9994466,0.000002870111,0.00009837999,0.00036707803,0.00003537857,0.000049726208],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00007311721,0.000103342965,0.00014532548,0.000055852062,0.00004681491,0.000007020056,0.00011036842,0.0000842983,0.000014300497],"category_scores_gemma":[0.000015839354,0.00007683265,0.000100263955,0.00023457492,0.00003368326,0.0000028720333,0.000049478036,0.000033678476,0.0000010857991],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000357922,0.00003130339,0.0020413501,0.0000017328103,0.00008264681,0.0000023787927,0.000020126361,0.00011275779,0.99632424,0.00001977474,0.0000834424,0.0012444357],"study_design_scores_gemma":[0.00020858158,0.000062195824,0.07647517,0.000003863465,0.00015303904,0.0000044426424,0.000002135132,0.00015157157,0.9212111,0.000010998492,0.0016311624,0.00008569098],"about_ca_topic_score_codex":0.0000041960047,"about_ca_topic_score_gemma":0.0000015172006,"teacher_disagreement_score":0.07511311,"about_ca_system_score_codex":0.0000031317466,"about_ca_system_score_gemma":0.000019103365,"threshold_uncertainty_score":0.31331447},"labels":[],"label_agreement":null},{"id":"W2062813429","doi":"10.1016/j.gene.2012.12.093","title":"Complete mitochondrial genomes from four subspecies of common chaffinch (Fringilla coelebs): New inferences about mitochondrial rate heterogeneity, neutral theory, and phylogenetic relationships within the order Passeriformes","year":2013,"lang":"en","type":"article","venue":"Gene","topic":"Genomics and Phylogenetic Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":16,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Royal Ontario Museum; Memorial University of Newfoundland","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Biology; Mitochondrial DNA; Evolutionary biology; Subspecies; Molecular evolution; Paraphyly; Phylogenetics; Genome; Molecular phylogenetics; Negative selection; Phylogenetic tree; Genetics; Gene; Zoology; Clade","score_opus":0.026724690271249837,"score_gpt":0.23586766295580988,"score_spread":0.20914297268456006,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2062813429","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99103385,0.0066110245,0.00046596728,0.0003821451,0.00060626765,0.0006058344,0.00016968863,0.000007720739,0.00011750276],"genre_scores_gemma":[0.9935609,0.0012040853,0.0037176616,0.0001492921,0.0009658469,0.000064128406,0.00012041836,0.00003502914,0.0001826181],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9981296,0.00037576127,0.0005134566,0.00048262317,0.00014682913,0.00035169994],"domain_scores_gemma":[0.99864936,0.00020654488,0.00029432922,0.00055051397,0.00016836908,0.00013088822],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0002170077,0.0003407069,0.00039686746,0.0000494882,0.0003524224,0.00011076997,0.00041888608,0.00018926026,0.00003270019],"category_scores_gemma":[0.00010711342,0.0002537502,0.00012353393,0.00012117434,0.00033976327,0.000004797695,0.00035330828,0.00016055914,0.000012653295],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015402626,0.0000307152,0.042045213,0.0000093619365,0.00031676207,7.0036856e-7,0.00049243757,0.00057819585,0.9541764,0.00076904974,0.00047542402,0.00095168845],"study_design_scores_gemma":[0.0019234202,0.00054562325,0.6472998,0.000023277877,0.00017499586,0.000020087684,0.0005232316,0.0001747586,0.32996985,0.012778541,0.005911538,0.00065483764],"about_ca_topic_score_codex":0.0006154216,"about_ca_topic_score_gemma":0.002626094,"teacher_disagreement_score":0.6242066,"about_ca_system_score_codex":0.000009482503,"about_ca_system_score_gemma":0.000112124806,"threshold_uncertainty_score":0.9999915},"labels":[],"label_agreement":null},{"id":"W2063597949","doi":"10.1016/j.gene.2014.02.038","title":"Transcription factor Runx1 inhibits proliferation and promotes developmental maturation in a selected population of inner olfactory nerve layer olfactory ensheathing cells","year":2014,"lang":"en","type":"article","venue":"Gene","topic":"Olfactory and Sensory Function Studies","field":"Neuroscience","cited_by":18,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Montreal Neurological Institute and Hospital","funders":"Canadian Institutes of Health Research; McGill University","keywords":"Olfactory ensheathing glia; Olfactory bulb; Biology; Cell biology; Olfactory mucosa; Olfactory epithelium; Olfactory system; Olfactory nerve; Central nervous system; Regeneration (biology); Population; Neuroscience; Anatomy","score_opus":0.0925376243872612,"score_gpt":0.23705641525396925,"score_spread":0.14451879086670805,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2063597949","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99853027,0.000030077017,0.00047577382,0.000057037752,0.00029234614,0.0004456876,0.000021978918,0.000071998606,0.000074802134],"genre_scores_gemma":[0.99934447,0.000013634964,0.00031410277,0.0000846163,0.00006838801,0.000020167952,0.000035887366,0.000018077839,0.000100650796],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99842024,0.0002909483,0.00043119836,0.00038360115,0.00026493846,0.00020909245],"domain_scores_gemma":[0.99952555,0.00009269872,0.0001562382,0.00009185761,0.0000826169,0.000051071253],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00017965109,0.00019371146,0.00023453214,0.00021448478,0.0001821585,0.00004296882,0.000048835587,0.0001252872,0.000029304518],"category_scores_gemma":[0.0002239508,0.00017796441,0.000031921816,0.0002973359,0.000046055753,0.0005389173,0.000019999663,0.00017319909,0.000009260968],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012607228,0.00005707672,0.015237398,0.000050764043,0.0000046548776,7.468126e-7,0.0034882026,0.000062984414,0.979653,0.000033337117,0.000012333995,0.0012734358],"study_design_scores_gemma":[0.0004033086,0.00007426694,0.25648975,0.000023131734,0.000006061721,0.0000064866435,0.00007008957,0.0007252126,0.7419274,0.000038106093,0.0000906736,0.00014554878],"about_ca_topic_score_codex":0.000028249045,"about_ca_topic_score_gemma":0.00008258267,"teacher_disagreement_score":0.24125235,"about_ca_system_score_codex":0.000087870096,"about_ca_system_score_gemma":0.000030754712,"threshold_uncertainty_score":0.7257178},"labels":[],"label_agreement":null},{"id":"W2064216440","doi":"10.1016/j.gene.2013.09.074","title":"Inactivation of the Integrin-Linked Kinase (ILK) in osteoblasts increases mineralization","year":2013,"lang":"en","type":"article","venue":"Gene","topic":"Cell Adhesion Molecules Research","field":"Medicine","cited_by":17,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia; McGill University; Shriners Hospitals for Children - Canada","funders":"","keywords":"Integrin-linked kinase; Osteoblast; Gene knockdown; Biology; Phosphorylation; Cell biology; GSK-3; Kinase; Endocrinology; Molecular biology; Internal medicine; Chemistry; Protein kinase A; Cell culture; Biochemistry; Medicine; In vitro","score_opus":0.01782256236618838,"score_gpt":0.2714426148091601,"score_spread":0.2536200524429717,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2064216440","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9974869,0.000057100588,0.00010534077,0.0006499533,0.000032801043,0.00052120397,0.0000013251569,0.000010257736,0.0011351574],"genre_scores_gemma":[0.9981021,0.000023044933,0.00030888896,0.0001794578,0.000045896595,0.000036692603,0.000024517834,0.000011250701,0.0012681319],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9992112,0.00008147576,0.00019893721,0.00012188434,0.00026319228,0.00012331174],"domain_scores_gemma":[0.999405,0.000052303873,0.000058446873,0.0002570681,0.00017602777,0.00005109717],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00010943053,0.00006665073,0.000120145174,0.00013303407,0.000017704646,0.00000720839,0.000083107545,0.000054373002,0.0003455342],"category_scores_gemma":[0.00048349638,0.000044498545,0.000037716272,0.0004069248,0.000042834152,0.000053095777,0.00007635725,0.000115359304,0.000046662346],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000048393675,0.00012217552,0.024199726,0.000039530576,0.0000051395846,0.000003015058,0.000088584,0.000030073774,0.97023755,0.00005423957,0.00081670954,0.004354879],"study_design_scores_gemma":[0.00074150425,0.00008653465,0.41593322,0.000080074606,0.000006264052,0.0000058497367,0.00007176874,0.001337475,0.58131796,0.000091864014,0.00028534664,0.000042147047],"about_ca_topic_score_codex":0.0020950672,"about_ca_topic_score_gemma":0.00016278886,"teacher_disagreement_score":0.39173347,"about_ca_system_score_codex":0.00008420566,"about_ca_system_score_gemma":0.00007757335,"threshold_uncertainty_score":0.3783357},"labels":[],"label_agreement":null},{"id":"W2064306482","doi":"10.1016/s0378-1119(00)00102-5","title":"Cloning and characterization of a new theta-class glutathione-S-transferase (GST) gene, gst-3, from Drosophila melanogaster","year":2000,"lang":"en","type":"article","venue":"Gene","topic":"Glutathione Transferases and Polymorphisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":28,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Simon Fraser University","funders":"","keywords":"Biology; Gene; Drosophila melanogaster; Genetics; Polyadenylation; Southern blot; Molecular biology; Drosophilidae; Gene cluster; Cloning (programming); Mutant; TATA box; Glutathione S-transferase; Gene expression; Glutathione; Promoter","score_opus":0.008189391448580505,"score_gpt":0.2074557103436481,"score_spread":0.1992663188950676,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2064306482","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9958874,0.001119613,0.0016770291,0.00046748243,0.00010476967,0.00017366678,0.00033355612,0.000015560663,0.00022094499],"genre_scores_gemma":[0.9949258,0.0013310432,0.0007045573,0.00051766995,0.00036701502,0.000008960903,0.0010026357,0.000035950863,0.0011063904],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99889284,0.00005108065,0.0002959145,0.0003867639,0.0001376236,0.00023577304],"domain_scores_gemma":[0.99946725,0.000008031275,0.000045503573,0.00030001174,0.00003375351,0.00014544344],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00007185593,0.00021240217,0.00022760009,0.00003602427,0.00007501128,0.00003683161,0.0001253046,0.00017501455,0.00035657553],"category_scores_gemma":[0.000003689159,0.00020282071,0.00010587142,0.00007424816,0.00005791518,0.000010412991,0.00002187145,0.00008134798,0.000020612417],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00025415132,0.000042472908,0.00053017813,0.000008138017,0.00007117441,0.000007882711,0.0003124084,0.00003930576,0.9915527,0.000029544324,0.000045143875,0.0071069095],"study_design_scores_gemma":[0.0014131437,0.00024806548,0.007664762,0.00001995489,0.00008086175,0.000035697012,0.000012135667,0.000106112224,0.97854006,0.00012839506,0.011498848,0.00025193288],"about_ca_topic_score_codex":0.00013389482,"about_ca_topic_score_gemma":0.000020335738,"teacher_disagreement_score":0.013012599,"about_ca_system_score_codex":0.0000053642834,"about_ca_system_score_gemma":0.00006099233,"threshold_uncertainty_score":0.8270788},"labels":[],"label_agreement":null},{"id":"W2065327004","doi":"10.1016/j.gene.2014.06.066","title":"Molecular cloning, expression and characterization of Pekin duck interferon-λ","year":2014,"lang":"en","type":"article","venue":"Gene","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":19,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"Canadian Institutes of Health Research; Canadian Liver Foundation","keywords":"Biology; Interferon; Gene; Cloning (programming); Recombinant DNA; Exon; Innate immune system; Genome; Genetics; Virology; Intron; Receptor; Molecular biology","score_opus":0.005500577209299422,"score_gpt":0.21182245672374486,"score_spread":0.20632187951444544,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2065327004","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99544805,0.00054710894,0.0031609433,0.00006230148,0.0002596976,0.000059964048,0.000004899814,0.000018582961,0.00043844653],"genre_scores_gemma":[0.9981468,0.00006101961,0.00005617274,0.00008817394,0.000010518648,0.0000033710742,0.000065251006,0.000008662702,0.0015600678],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9994464,0.00014783193,0.0001523052,0.00012475815,0.000013673315,0.0001150526],"domain_scores_gemma":[0.9997169,0.000021385169,0.00007413294,0.00014875187,0.000030446921,0.000008415197],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00010596227,0.000077377386,0.00013887284,0.000057262117,0.000037019978,0.0000051251955,0.000073801646,0.00009369499,0.0001897833],"category_scores_gemma":[0.000033862198,0.000066688284,0.000027697852,0.000026766655,0.00006989409,0.000035175344,0.000068800015,0.00007092555,0.00005634183],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00025707527,0.00002108937,0.00014753887,0.000009528419,0.000016629943,3.5148204e-7,0.0002585637,3.608764e-7,0.99540865,0.00021227472,0.00006326744,0.0036046593],"study_design_scores_gemma":[0.00042987723,0.00026276812,0.0037339008,0.00003683737,0.00000803529,0.000019784198,0.000023691122,0.000008219783,0.98222995,0.000012043806,0.013167664,0.00006721751],"about_ca_topic_score_codex":0.000008868864,"about_ca_topic_score_gemma":4.557139e-7,"teacher_disagreement_score":0.013178701,"about_ca_system_score_codex":0.0000049585155,"about_ca_system_score_gemma":0.000007672131,"threshold_uncertainty_score":0.27194694},"labels":[],"label_agreement":null},{"id":"W2066115176","doi":"10.1016/s0378-1119(02)00409-2","title":"Roles of mouse UBC13 in DNA postreplication repair and Lys63-linked ubiquitination","year":2002,"lang":"en","type":"article","venue":"Gene","topic":"DNA Repair Mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":34,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta; University of Saskatchewan","funders":"Canadian Institutes of Health Research; University of Saskatchewan","keywords":"Biology; Ubiquitin-conjugating enzyme; Ubiquitin; DNA; Biochemistry; Ubiquitin ligase; Saccharomyces cerevisiae; Yeast; Cell biology; Gene; Genetics","score_opus":0.009938956136667091,"score_gpt":0.2230437909881272,"score_spread":0.21310483485146012,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2066115176","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9985509,0.0005953429,0.00017565483,0.000110637346,0.000018074688,0.00012578994,0.000009318656,0.000019818614,0.0003944557],"genre_scores_gemma":[0.9966215,0.00026228168,0.0021115644,0.00007821339,0.000035850422,0.000016662305,0.00006067701,0.000010972739,0.00080228527],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99942684,0.00003049665,0.00015742995,0.00021975032,0.000068425376,0.000097037955],"domain_scores_gemma":[0.9995975,0.0000041405133,0.000064365006,0.0002606062,0.000045612964,0.000027808841],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00011586639,0.00006856894,0.00007818659,0.000042382897,0.000015283633,0.000004219099,0.000059155598,0.000091758106,0.000016126125],"category_scores_gemma":[0.00005284415,0.000073716634,0.000033991288,0.000055064138,0.000022555445,0.0000030285146,0.000048313315,0.000026667898,0.0000046175937],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000011862595,0.00004639429,0.0008834121,0.000010099027,0.0000075996777,6.89047e-7,0.000059278664,0.000010932488,0.99435616,0.0000930151,0.00015881645,0.004361727],"study_design_scores_gemma":[0.0003051899,0.00012567978,0.0025341262,0.000005365713,0.0000059143163,0.0000060257667,0.000035616853,0.0009083073,0.99520147,0.00007880361,0.00071777473,0.000075734555],"about_ca_topic_score_codex":0.000007488526,"about_ca_topic_score_gemma":0.000031488762,"teacher_disagreement_score":0.0042859926,"about_ca_system_score_codex":0.000008401373,"about_ca_system_score_gemma":0.0000062088657,"threshold_uncertainty_score":0.3006077},"labels":[],"label_agreement":null},{"id":"W2067738146","doi":"10.1016/j.gene.2014.02.034","title":"Genome wide DNA methylation profiling for epigenetic alteration in coronary artery disease patients","year":2014,"lang":"en","type":"article","venue":"Gene","topic":"Epigenetics and DNA Methylation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":105,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Technische Universität München; University Health Network","keywords":"DNA methylation; Biology; Epigenetics; Epigenome; Differentially methylated regions; CpG site; Coronary artery disease; Methylation; Bisulfite sequencing; Genetics; Disease; Bioinformatics; Gene; Internal medicine; Gene expression; Medicine","score_opus":0.010459071141617187,"score_gpt":0.24131341475218054,"score_spread":0.23085434361056337,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2067738146","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.919976,0.0006344568,0.078533374,0.0000483301,0.00016367606,0.0005500354,0.000027070662,0.000007723905,0.000059338898],"genre_scores_gemma":[0.9934615,0.00009670454,0.003703492,0.00011706895,0.00023180916,0.00011500522,0.0021719348,0.00002602832,0.00007645889],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9989826,0.00008776206,0.00027204776,0.0003423703,0.000108675245,0.00020655889],"domain_scores_gemma":[0.99944496,0.000027833063,0.000089097375,0.00024905082,0.00010121796,0.000087823835],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002780053,0.0001296358,0.00010930075,0.00006389777,0.0000671476,0.000021324136,0.00008265553,0.00008627956,0.00000442506],"category_scores_gemma":[0.00017801386,0.00013884583,0.000059771268,0.00005940817,0.000018522056,0.000006128687,0.00003537003,0.000035278084,0.0000054058305],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000115408504,0.000073332514,0.13299571,0.000024358002,0.000011582379,3.421814e-7,0.000026616153,0.0040228227,0.85609347,0.000020320691,0.000005723708,0.0066103316],"study_design_scores_gemma":[0.00086328795,0.00027263653,0.50824606,0.000005889354,0.000016531118,1.3303266e-7,0.0000035323897,0.0026315495,0.48463058,0.0011912817,0.0019524936,0.00018598612],"about_ca_topic_score_codex":0.0000015271935,"about_ca_topic_score_gemma":0.00001185527,"teacher_disagreement_score":0.37525037,"about_ca_system_score_codex":0.000022408323,"about_ca_system_score_gemma":0.00003834955,"threshold_uncertainty_score":0.5661969},"labels":[],"label_agreement":null},{"id":"W2069878146","doi":"10.1016/j.gene.2008.02.015","title":"Autocrine BMP4 signalling regulates ID3 proto-oncogene expression in human ovarian cancer cells","year":2008,"lang":"en","type":"article","venue":"Gene","topic":"TGF-β signaling in diseases","field":"Biochemistry, Genetics and Molecular Biology","cited_by":67,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Western University; Dalhousie University; London Health Sciences Centre","funders":"Wellcome Trust","keywords":"Biology; Autocrine signalling; Enhancer; Bone morphogenetic protein 4; Cancer research; Oncogene; Ovarian cancer; Cancer; Cancer cell; Downregulation and upregulation; Bone morphogenetic protein; Gene; Cell biology; Gene expression; Genetics; Cell culture; Cell cycle","score_opus":0.017162128655370472,"score_gpt":0.26885327896958594,"score_spread":0.25169115031421546,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2069878146","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99628496,0.002235103,0.0006684452,0.00002842763,0.00010284911,0.00049526914,0.000021261252,0.00003560026,0.00012809245],"genre_scores_gemma":[0.995633,0.000112016896,0.0024886127,0.000104289014,0.00049928925,0.0002830588,0.00013135746,0.000044442604,0.0007039029],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99866104,0.00006324813,0.00029746295,0.00046798596,0.00017113886,0.00033913468],"domain_scores_gemma":[0.99934876,0.000006967108,0.00009942404,0.0003682994,0.000063092404,0.00011344907],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000102741426,0.00020242954,0.00017885864,0.00006492901,0.00016057942,0.000014627062,0.00024730666,0.00013983334,0.00015187231],"category_scores_gemma":[0.000018672821,0.00019949349,0.00007844088,0.00010335158,0.00007167119,0.0000049005575,0.00013754558,0.00008840394,0.00001044615],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000069024616,0.00011017894,0.0026456963,0.000027850354,0.000020813908,0.00003547588,0.00008603152,0.0040654116,0.9917798,0.0000015835071,0.000819858,0.00033825645],"study_design_scores_gemma":[0.000698638,0.00008223138,0.0027750607,0.00006243607,0.000009858891,0.000009447159,0.000009625416,0.00007939853,0.99089664,0.000037952483,0.005080853,0.00025785083],"about_ca_topic_score_codex":0.000075168595,"about_ca_topic_score_gemma":0.000038593633,"teacher_disagreement_score":0.0042609954,"about_ca_system_score_codex":0.000032055043,"about_ca_system_score_gemma":0.0001421837,"threshold_uncertainty_score":0.81351084},"labels":[],"label_agreement":null},{"id":"W2070165558","doi":"10.1016/j.gene.2013.09.108","title":"Negative regulation of the peptidylarginine deiminase type IV promoter by NF-κB in human myeloid cells","year":2013,"lang":"en","type":"article","venue":"Gene","topic":"Rheumatoid Arthritis Research and Therapies","field":"Medicine","cited_by":18,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Western University","funders":"Canadian Institutes of Health Research","keywords":"Biology; Chromatin immunoprecipitation; Promoter; Transcription factor; Molecular biology; Luciferase; NFKB1; NF-κB; Protein subunit; Transcription (linguistics); Transcriptional regulation; Gene; Gene expression; Genetics; Inflammation; Transfection; Immunology","score_opus":0.010773954053602389,"score_gpt":0.24927678116718924,"score_spread":0.23850282711358683,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2070165558","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9970036,0.00063229894,0.000010946627,0.00086227065,0.000041080475,0.0005552062,0.0000064897376,0.00001053439,0.00087753683],"genre_scores_gemma":[0.9967065,0.00025312896,0.0003621622,0.00007393238,0.00003162267,0.00002564615,0.000020319529,0.000013104456,0.0025135998],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9992407,0.000062455445,0.00018001522,0.00012652857,0.00020968437,0.00018062026],"domain_scores_gemma":[0.99950165,0.000021404134,0.000055004693,0.00023564552,0.0001259338,0.000060389495],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00011996493,0.00007881011,0.00014913325,0.000053613225,0.000048395294,0.000011588929,0.00008073173,0.000043440992,0.000897442],"category_scores_gemma":[0.000047337795,0.000053057083,0.000034809793,0.00017137208,0.0001050586,0.00007323569,0.000038388825,0.00011469135,0.000067122295],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000038767655,0.00008575828,0.0030824156,0.000017940745,0.000016895856,0.0000015288803,0.000796208,0.000003415066,0.9870434,0.000034269437,0.0048836474,0.00399578],"study_design_scores_gemma":[0.0012114983,0.00025804737,0.04683986,0.00009952011,0.0000018370274,0.000005451509,0.00012007692,0.0001943029,0.9492087,0.0006721746,0.0013281569,0.000060412385],"about_ca_topic_score_codex":0.0002510663,"about_ca_topic_score_gemma":0.000055498378,"teacher_disagreement_score":0.043757442,"about_ca_system_score_codex":0.00002483878,"about_ca_system_score_gemma":0.00004145901,"threshold_uncertainty_score":0.98263603},"labels":[],"label_agreement":null},{"id":"W2070931581","doi":"10.1016/j.gene.2012.10.049","title":"Regulation of p53 by reversible post-transcriptional and post-translational mechanisms in liver and skeletal muscle of an anoxia tolerant turtle, Trachemys scripta elegans","year":2012,"lang":"en","type":"article","venue":"Gene","topic":"Cancer, Hypoxia, and Metabolism","field":"Biochemistry, Genetics and Molecular Biology","cited_by":53,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Carleton University","funders":"","keywords":"Biology; Skeletal muscle; Cell biology; Phosphorylation; Regulation of gene expression; Glycolysis; Gene; Biochemistry; Metabolism; Endocrinology","score_opus":0.00690290433814069,"score_gpt":0.21124067891791393,"score_spread":0.20433777457977323,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2070931581","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9864795,0.011444747,0.0012046028,0.000077249904,0.00024346341,0.00014946867,0.0003451731,0.0000033664421,0.000052421492],"genre_scores_gemma":[0.9946816,0.00044598756,0.003830334,0.00010300068,0.00019604362,0.0000054087004,0.00055563974,0.000012821534,0.00016919448],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9992314,0.00004125561,0.00020965548,0.00020500131,0.00014130177,0.00017137485],"domain_scores_gemma":[0.99962175,0.000004059238,0.000067166584,0.00012674376,0.00009741458,0.00008286352],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00018902666,0.000113073256,0.00015555718,0.000058018377,0.000030902895,0.000005678426,0.00005736714,0.00013186218,0.000043335443],"category_scores_gemma":[0.000008939126,0.00011902286,0.000048162714,0.00006111376,0.000074959185,0.00003263161,0.000017007897,0.000052372037,3.2185608e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009181699,0.00011533467,0.00031131902,0.000035162382,0.000020508178,1.2082192e-7,0.0003854772,0.0000074812783,0.99338394,0.0003768167,0.00010938559,0.0051626493],"study_design_scores_gemma":[0.0010624136,0.0001974132,0.28356242,0.000010685629,0.000043905482,0.000022858043,0.0001305501,0.00011050097,0.70689833,0.00012408309,0.007674257,0.00016254191],"about_ca_topic_score_codex":0.00017202292,"about_ca_topic_score_gemma":0.00012493883,"teacher_disagreement_score":0.28648555,"about_ca_system_score_codex":0.000004962293,"about_ca_system_score_gemma":0.00004315024,"threshold_uncertainty_score":0.48536113},"labels":[],"label_agreement":null},{"id":"W2071041208","doi":"10.1016/j.gene.2012.01.056","title":"A variant of unknown significance in the GLA gene causing diagnostic uncertainty in a young female with isolated hypertrophic cardiomyopathy","year":2012,"lang":"en","type":"article","venue":"Gene","topic":"Lysosomal Storage Disorders Research","field":"Medicine","cited_by":8,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Sherbrooke; British Columbia Children's Hospital","funders":"","keywords":"Hypertrophic cardiomyopathy; Biology; Genetics; Gene; Genetic testing; Mutation","score_opus":0.02230886585712283,"score_gpt":0.27014068949206954,"score_spread":0.2478318236349467,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2071041208","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99406624,0.0036953522,0.00055209687,0.0003008762,0.00006592476,0.0008847523,0.0000093295,0.000014615373,0.00041082792],"genre_scores_gemma":[0.99904585,0.00018058575,0.0003447311,0.00010062,0.0001182066,0.0001209963,0.00001988146,0.000028348713,0.000040788884],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99812895,0.00025249016,0.00029977565,0.00025813188,0.00048323863,0.0005774239],"domain_scores_gemma":[0.9990083,0.00026244143,0.000071800685,0.0004403465,0.000110763656,0.00010636151],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00076276873,0.00017039686,0.0003969028,0.00018613705,0.000050008384,0.000013347068,0.00014222208,0.000086959095,0.000029279367],"category_scores_gemma":[0.00043020176,0.00011145163,0.000057224046,0.001053106,0.000120133474,0.00008074129,0.00005304271,0.0003067561,0.000009140914],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0012196279,0.0010342437,0.8151061,0.00024291627,0.00013021629,0.0026009993,0.010144834,0.0041130167,0.1631661,0.00006968398,0.000030223922,0.0021420114],"study_design_scores_gemma":[0.0067095053,0.0011053226,0.9712359,0.00045539695,0.00020447072,0.0019891197,0.0023070236,0.0054402617,0.009751571,0.000045290708,0.00028058572,0.00047558532],"about_ca_topic_score_codex":0.0047796043,"about_ca_topic_score_gemma":0.0009976135,"teacher_disagreement_score":0.15612975,"about_ca_system_score_codex":0.0001949547,"about_ca_system_score_gemma":0.00021784386,"threshold_uncertainty_score":0.7225364},"labels":[],"label_agreement":null},{"id":"W2072535406","doi":"10.1016/s0378-1119(01)00723-5","title":"A repressor-response regulator gene pair controlling jadomycin B production in Streptomyces venezuelae ISP5230","year":2001,"lang":"en","type":"article","venue":"Gene","topic":"Microbial Natural Products and Biosynthesis","field":"Medicine","cited_by":58,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Biology; Gene; Repressor; Regulator gene; Mutant; Response regulator; Genetics; Streptomyces; Plasmid; Gene cluster; Regulation of gene expression; Gene expression; Bacteria","score_opus":0.015443379807881746,"score_gpt":0.25130135540351844,"score_spread":0.2358579755956367,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2072535406","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9463118,0.0017675285,0.000011345708,0.050850704,0.0002929208,0.0006141715,0.0000071979184,0.00010069424,0.000043676126],"genre_scores_gemma":[0.9925266,0.00016142114,0.0013918015,0.0019274395,0.0011489016,0.0000068810423,0.000019796385,0.00002955416,0.0027876073],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9981678,0.00017992985,0.00040156805,0.0006252465,0.00023424327,0.00039117044],"domain_scores_gemma":[0.99898416,0.00007214204,0.00012484667,0.0005867185,0.00013675161,0.00009535952],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008750966,0.0002064912,0.00039597432,0.00019613723,0.000085511674,0.000024293746,0.0001041777,0.00017123252,0.0001619126],"category_scores_gemma":[0.0008888587,0.00016546498,0.00010781255,0.00042594585,0.000063449814,0.00010471843,0.000038758684,0.00026881084,0.000048568767],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.004256387,0.00011873593,0.0054658256,0.000029949995,0.00004876438,0.00023670043,0.00013986802,0.00007573794,0.97729737,0.0000020059915,0.0034905244,0.00883816],"study_design_scores_gemma":[0.0014215215,0.00015311931,0.030295795,0.000102812424,0.000064929634,0.000365247,0.0000442243,0.0000942456,0.9360588,0.00003904831,0.031162683,0.00019754953],"about_ca_topic_score_codex":0.00008652089,"about_ca_topic_score_gemma":0.000016143056,"teacher_disagreement_score":0.048923265,"about_ca_system_score_codex":0.00011870732,"about_ca_system_score_gemma":0.00008730134,"threshold_uncertainty_score":0.67474663},"labels":[],"label_agreement":null},{"id":"W2072771169","doi":"10.1016/j.gene.2013.03.064","title":"Ring chromosome 21 presenting with sacrococcygeal teratoma: Prenatal diagnosis, molecular cytogenetic characterization and literature review","year":2013,"lang":"en","type":"article","venue":"Gene","topic":"Teratomas and Epidermoid Cysts","field":"Medicine","cited_by":6,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Mackay Memorial Hospital; National Science Council","keywords":"Sacrococcygeal teratoma; Biology; Teratoma; Ring chromosome; Prenatal diagnosis; Fetus; Karyotype; Chromosome; Anatomy; Genetics; Pathology; Pregnancy; Medicine; Gene","score_opus":0.005711760070933455,"score_gpt":0.22816590603517,"score_spread":0.22245414596423654,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2072771169","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9503181,0.047186214,0.00019654128,0.0011752916,0.000041309242,0.00094203226,0.000016970285,0.00006378004,0.000059748556],"genre_scores_gemma":[0.9845424,0.012002654,0.0013633415,0.00108982,0.00019709695,0.00033808616,0.00029551677,0.000038334238,0.00013269171],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9988838,0.000041345626,0.00025039088,0.0003481032,0.0001935501,0.00028284895],"domain_scores_gemma":[0.9993209,0.000012664018,0.000091612004,0.0002819417,0.00012012038,0.00017272364],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000067647336,0.00020252378,0.00033013045,0.000059352627,0.00007284062,0.00012271378,0.0000602975,0.00007408006,0.000080879945],"category_scores_gemma":[0.00002753699,0.00015222505,0.000045206554,0.00021847355,0.00003019484,0.00020964397,0.00006438209,0.00014226802,0.000021537737],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000027277301,0.00013145375,0.110239044,0.006421931,0.00016935579,0.0012092716,0.0004908978,0.0000019209108,0.8604471,0.000026587566,0.0004451731,0.020389982],"study_design_scores_gemma":[0.0018722941,0.0003110062,0.5611795,0.013228118,0.0002840442,0.0034381088,0.000012250177,0.0004448496,0.4146964,0.000014071971,0.0040014135,0.0005179411],"about_ca_topic_score_codex":0.000007921191,"about_ca_topic_score_gemma":0.0000011894701,"teacher_disagreement_score":0.45094046,"about_ca_system_score_codex":0.0000203615,"about_ca_system_score_gemma":0.000029631912,"threshold_uncertainty_score":0.62075573},"labels":[],"label_agreement":null},{"id":"W2072872244","doi":"10.1016/j.gene.2008.03.015","title":"Differential expansion and evolution of the exon family encoding the Serpin-1 reactive centre loop has resulted in divergent serpin repertoires among the Lepidoptera","year":2008,"lang":"en","type":"article","venue":"Gene","topic":"Invertebrate Immune Response Mechanisms","field":"Immunology and Microbiology","cited_by":24,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Agriculture and Agri-Food Canada","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Serpin; Biology; Genetics; Exon; Gene; Alternative splicing","score_opus":0.018395299969297337,"score_gpt":0.19638451745097843,"score_spread":0.1779892174816811,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2072872244","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99546707,0.0019636324,0.00013100698,0.0010197866,0.000829675,0.00048044173,0.000016855212,0.000021714854,0.000069803],"genre_scores_gemma":[0.9986013,0.00032835218,0.000010445624,0.00009603895,0.00002556873,0.00001815139,0.000017264636,0.000013038511,0.00088980934],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99797094,0.0009962132,0.00034905336,0.00028831736,0.00008500958,0.0003104748],"domain_scores_gemma":[0.9989893,0.00020741444,0.0002048449,0.00051475374,0.000071391856,0.0000123391765],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00029689458,0.00018688303,0.00023324126,0.00007184359,0.00072323444,0.000012329175,0.00032945263,0.00018771992,0.000050788585],"category_scores_gemma":[0.00015029045,0.00009534497,0.00008456658,0.00020411813,0.00053461274,0.00008063902,0.00030428765,0.00035172346,0.000018921446],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00045382796,0.000059368962,0.0053324085,0.0000048911465,0.00006618654,0.000005304918,0.0049206405,0.00002707861,0.9880549,0.000120212935,0.00035585678,0.00059932907],"study_design_scores_gemma":[0.00084625266,0.000060651677,0.23392622,0.000068390116,0.00003199346,0.000033871584,0.0018421959,0.0002012454,0.7625374,0.000076970144,0.00026762616,0.00010717747],"about_ca_topic_score_codex":0.0024056032,"about_ca_topic_score_gemma":0.00030041483,"teacher_disagreement_score":0.22859381,"about_ca_system_score_codex":0.00011510019,"about_ca_system_score_gemma":0.00009426112,"threshold_uncertainty_score":0.55626076},"labels":[],"label_agreement":null},{"id":"W2073052887","doi":"10.1016/j.gene.2011.02.001","title":"Complex repeat structures and novel features in the mitochondrial genomes of the diatoms Phaeodactylum tricornutum and Thalassiosira pseudonana","year":2011,"lang":"en","type":"article","venue":"Gene","topic":"Diatoms and Algae Research","field":"Materials Science","cited_by":115,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"Phaeodactylum tricornutum; Thalassiosira pseudonana; Biology; Genome; Gene; Mitochondrial DNA; Genetics; Diatom; Frameshift mutation; Botany; Phytoplankton","score_opus":0.03961848502951955,"score_gpt":0.2629383727025458,"score_spread":0.22331988767302624,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2073052887","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99748266,0.0011060543,0.000021995613,0.00019309045,0.00021846146,0.0002916103,0.000055787066,0.000008414775,0.00062194763],"genre_scores_gemma":[0.9981268,0.00008630752,0.001446245,0.00011606897,0.00011749447,0.000013333425,0.0000018918035,0.000009839394,0.000082001774],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9988756,0.000112342896,0.0001897035,0.00025570884,0.00030561408,0.00026102242],"domain_scores_gemma":[0.9993875,0.0000945432,0.000088525354,0.0003475679,0.000030810304,0.00005102185],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00028868922,0.00012347211,0.00019064157,0.000057196125,0.00013046741,0.00007827394,0.0004207165,0.000057091744,0.0001054235],"category_scores_gemma":[0.00005644006,0.000061000614,0.000042507418,0.00016734864,0.00030914636,0.000078091274,0.00023859892,0.00011774456,0.0000015660196],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007961005,0.00006625165,0.0071286284,0.000029544419,0.00000906867,0.0000054067673,0.0016985581,0.0000012396588,0.9855147,0.002201816,0.00077149435,0.002493655],"study_design_scores_gemma":[0.0009183599,0.00008419102,0.83171076,0.000012697564,0.000015520829,0.00005174435,0.00034543016,0.000022836775,0.16334738,0.0026259185,0.000744418,0.0001207394],"about_ca_topic_score_codex":0.0005891045,"about_ca_topic_score_gemma":0.00010538443,"teacher_disagreement_score":0.82458216,"about_ca_system_score_codex":0.000009565559,"about_ca_system_score_gemma":0.00004101924,"threshold_uncertainty_score":0.24875328},"labels":[],"label_agreement":null},{"id":"W2073403831","doi":"10.1016/j.gene.2004.10.021","title":"The spectrum of genomic signatures: from dinucleotides to chaos game representation","year":2005,"lang":"en","type":"article","venue":"Gene","topic":"Fractal and DNA sequence analysis","field":"Biochemistry, Genetics and Molecular Biology","cited_by":125,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Western University","funders":"Natural Sciences and Engineering Research Council of Canada; Canada Research Chairs","keywords":"Biology; Genome; Phylogenetic tree; Computational biology; Genomics; Subsequence; Genetics; DNA sequencing; k-mer; Comparative genomics; Phylogenetics; Evolutionary biology; DNA; Gene; Mathematics","score_opus":0.006804625596839724,"score_gpt":0.23956968364986872,"score_spread":0.232765058053029,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2073403831","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9961914,0.0015290175,0.0006065397,0.0011631781,0.000042962987,0.00007003686,0.00001984396,0.000004356796,0.0003726577],"genre_scores_gemma":[0.9977655,0.00036319232,0.00065765704,0.0003537602,0.0003974977,0.0000064090004,0.00006707715,0.0000074639947,0.00038148736],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9994675,0.000020191861,0.00013210111,0.00018227678,0.00007906973,0.000118846234],"domain_scores_gemma":[0.99959105,0.000012072074,0.000053525004,0.00028385266,0.000018825924,0.00004066832],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000049121383,0.00006532765,0.000075369506,0.000018745552,0.000045639415,0.000014416721,0.0001589971,0.00004562852,0.000038917944],"category_scores_gemma":[0.0000320416,0.00004769502,0.00007290943,0.000059865066,0.000035290246,0.000002510463,0.000061182494,0.000032876804,0.000040107043],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000039781848,0.000011190069,0.00043598446,6.1584586e-7,0.0000438522,5.4441864e-7,0.000053936816,0.0015141672,0.99137944,0.000020218731,0.00047246303,0.006027783],"study_design_scores_gemma":[0.00008906923,0.00005476976,0.0075251022,0.0000017473701,0.000015809374,6.447792e-7,0.0000550633,0.0001350056,0.9793818,0.00022903574,0.0124466615,0.000065313674],"about_ca_topic_score_codex":0.00017269782,"about_ca_topic_score_gemma":0.00026185947,"teacher_disagreement_score":0.011997685,"about_ca_system_score_codex":0.0000070727233,"about_ca_system_score_gemma":0.000016599892,"threshold_uncertainty_score":0.19449465},"labels":[],"label_agreement":null},{"id":"W2074279070","doi":"10.1016/s0378-1119(00)00269-9","title":"Human huntingtin-associated protein (HAP-1) gene: genomic organisation and an intragenic polymorphism","year":2000,"lang":"en","type":"article","venue":"Gene","topic":"Genetic Neurodegenerative Diseases","field":"Neuroscience","cited_by":6,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"Medical Research Council; National Institute of Neurological Disorders and Stroke; American Heart Association","keywords":"Huntingtin; Biology; Genetics; Exon; Gene; Intron; Mutant; Genome","score_opus":0.019710044030478543,"score_gpt":0.25033674372838144,"score_spread":0.2306266996979029,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2074279070","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9987264,0.000085779386,0.000015898822,0.000105621424,0.0000674996,0.00047103816,0.000091928,0.00015537588,0.00028041794],"genre_scores_gemma":[0.9974447,0.000022202457,0.00033180835,0.0007868095,0.00022299124,0.000039056828,0.00004725239,0.000057395984,0.0010478187],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9980897,0.00026086427,0.0002840491,0.00073888403,0.00025483643,0.00037167646],"domain_scores_gemma":[0.9992589,0.000023495837,0.00011284293,0.00039393184,0.000024477464,0.00018635523],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00010074686,0.00023062562,0.00017977685,0.000069163085,0.00039696062,0.0001302068,0.000266323,0.00007929657,0.0016927233],"category_scores_gemma":[0.000088326626,0.00024956831,0.000043233405,0.00017618459,0.00011894665,0.00014044269,0.000063893596,0.00012056225,0.00020648622],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000011640487,0.000109837085,0.0006424203,0.000002125899,0.000005549799,0.000011885454,0.00026559702,0.000054069682,0.9945956,0.000038326285,0.00004079936,0.0042221737],"study_design_scores_gemma":[0.00052659464,0.00015729126,0.047486793,0.000003744765,0.000024658117,0.0000062387307,0.000012623357,0.00014811903,0.95075315,0.00052368955,0.00010395999,0.00025311467],"about_ca_topic_score_codex":0.000113833274,"about_ca_topic_score_gemma":0.000036040037,"teacher_disagreement_score":0.04684437,"about_ca_system_score_codex":0.000052947715,"about_ca_system_score_gemma":0.00006260684,"threshold_uncertainty_score":0.99999565},"labels":[],"label_agreement":null},{"id":"W2074725166","doi":"10.1016/s0378-1119(01)00445-0","title":"Transcriptional activity of the SHP-1 gene in MCF7 cells is differentially regulated by binding of NF-Y factor to two distinct CCAAT-elements","year":2001,"lang":"en","type":"article","venue":"Gene","topic":"Protein Tyrosine Phosphatases","field":"Biochemistry, Genetics and Molecular Biology","cited_by":30,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"National Research Council Canada; Biotechnology Research Institute; McGill University","funders":"Natural Sciences and Engineering Research Council of Canada; University of New England","keywords":"CAAT box; Biology; Molecular biology; Trichostatin A; Promoter; Transcription factor; Ccaat-enhancer-binding proteins; Repressor; TATA box; Response element; Histone deacetylase; Gene; Gene expression; DNA-binding protein; Histone; Genetics","score_opus":0.012617801092037952,"score_gpt":0.24887642724907466,"score_spread":0.23625862615703672,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2074725166","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99612033,0.0005895975,0.0012302641,0.00010731493,0.000113755545,0.0003207741,0.0014983177,0.0000038128612,0.000015825177],"genre_scores_gemma":[0.99889076,0.00005565637,0.00045352726,0.000052281073,0.00003885015,0.000016344766,0.0002157653,0.000016282305,0.00026051825],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9989849,0.000057521065,0.0002652919,0.0002788616,0.00019872563,0.00021470615],"domain_scores_gemma":[0.9994207,0.000006390859,0.00013062535,0.00034190275,0.00004486826,0.000055495922],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00007963089,0.00014663553,0.00017384699,0.00003604113,0.00003595442,0.000006926658,0.0002704262,0.000073724084,0.00009558048],"category_scores_gemma":[0.000019808003,0.0001226072,0.000092624294,0.00014705633,0.000052632964,0.0000042804963,0.000118643904,0.00005519198,0.0000023585376],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00017580099,0.00015728985,0.006018556,0.000013595983,0.000042570482,7.042731e-7,0.000026588188,0.000019199882,0.99082184,0.000004598804,0.00046412894,0.0022551566],"study_design_scores_gemma":[0.000781304,0.00009508086,0.046771668,0.000016474112,0.000014444594,0.0000013822347,0.0000025334198,0.000018673698,0.95083016,0.000014048663,0.0013362414,0.00011798327],"about_ca_topic_score_codex":0.00015190712,"about_ca_topic_score_gemma":0.000095258176,"teacher_disagreement_score":0.040753115,"about_ca_system_score_codex":0.000023304765,"about_ca_system_score_gemma":0.000043297558,"threshold_uncertainty_score":0.4999777},"labels":[],"label_agreement":null},{"id":"W2074844451","doi":"10.1016/j.gene.2012.08.017","title":"Dynamic expression profiles of virus-responsive and putative antimicrobial peptide-encoding transcripts during Atlantic cod (Gadus morhua) embryonic and early larval development","year":2012,"lang":"en","type":"article","venue":"Gene","topic":"Aquaculture disease management and microbiota","field":"Immunology and Microbiology","cited_by":16,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Memorial University of Newfoundland","funders":"Genome Atlantic; Atlantic Canada Opportunities Agency; Canada Research Chairs; Genome Canada","keywords":"Biology; Blastula; Atlantic cod; Gadus; Embryogenesis; Gastrulation; Suppression subtractive hybridization; Gene; Genetics; Gene expression; cDNA library; Fishery","score_opus":0.009183240764714684,"score_gpt":0.22249247829644173,"score_spread":0.21330923753172704,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2074844451","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.995007,0.0041032177,0.00009879333,0.000041864216,0.00020154828,0.00040553164,0.000060351984,0.00003766944,0.000044067638],"genre_scores_gemma":[0.99808145,0.00020467839,0.00059623574,0.000025041683,0.00001551766,0.000016039252,0.00017088528,0.000019747082,0.00087042036],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9988588,0.0001268823,0.00026287878,0.0002929131,0.000038587837,0.0004199324],"domain_scores_gemma":[0.9996131,0.00003263587,0.00013884455,0.00011982058,0.00004767922,0.000047925976],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015966532,0.00023128894,0.00030447636,0.00012744681,0.00025618356,0.000019087925,0.00010470178,0.00014651667,0.000030694602],"category_scores_gemma":[0.000019101604,0.00020095528,0.00005441835,0.000081721104,0.0001935893,0.00018525285,0.00015349421,0.00015190536,0.00003870305],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00047791703,0.00008836799,0.010604084,0.0001425537,0.00018657908,0.000006762201,0.0057643685,0.0000013786811,0.9822895,0.000025308409,0.00021491104,0.00019829134],"study_design_scores_gemma":[0.0013356492,0.000043404663,0.18889508,0.00011774186,0.000100306985,0.000046650162,0.0005778673,7.0053716e-7,0.80795777,0.0000035185444,0.0006980557,0.00022326637],"about_ca_topic_score_codex":0.000015310023,"about_ca_topic_score_gemma":0.000007588615,"teacher_disagreement_score":0.178291,"about_ca_system_score_codex":0.00003111944,"about_ca_system_score_gemma":0.000039722643,"threshold_uncertainty_score":0.8194719},"labels":[],"label_agreement":null},{"id":"W2075011079","doi":"10.1016/s0378-1119(02)00795-3","title":"Molecular cloning and expression of gerbil granulocyte/macrophage colony-stimulating factor","year":2002,"lang":"en","type":"article","venue":"Gene","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":7,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"McGill University","keywords":"Biology; Gerbil; Complementary DNA; Molecular biology; Open reading frame; Reverse transcriptase; Cloning (programming); Granulocyte macrophage colony-stimulating factor; Gene; Peptide sequence; Polymerase chain reaction; Biochemistry; Cytokine; Immunology; Internal medicine","score_opus":0.012543712376625138,"score_gpt":0.22136549932046362,"score_spread":0.2088217869438385,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2075011079","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9907094,0.008087261,0.0004934314,0.000033450204,0.00012023081,0.0001140252,0.000005125506,0.000026772943,0.00041026314],"genre_scores_gemma":[0.99895406,0.000117364405,0.00031167016,0.000028624652,0.000009478435,0.000005686895,0.000017512752,0.000009559217,0.0005460213],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9993438,0.00011743846,0.0002099481,0.00013844187,0.000026040685,0.00016429387],"domain_scores_gemma":[0.9996373,0.0000671778,0.00009943734,0.00015133116,0.0000339124,0.000010864262],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009154747,0.00009224371,0.00016151674,0.000059327438,0.00010619653,0.000006175797,0.00006297664,0.0001359652,0.00037923967],"category_scores_gemma":[0.00006704357,0.000083181476,0.00003995005,0.000055972712,0.00006436017,0.000060198276,0.000052786003,0.00010379196,0.00006445713],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000055512417,0.0000173808,0.0005761564,0.000014976317,0.000017796598,0.0000056176054,0.00054283603,0.000053824053,0.993187,0.00002400541,0.000085102285,0.0054197703],"study_design_scores_gemma":[0.0006783831,0.00009442674,0.0030103547,0.000029953413,0.000010665306,0.00002186575,0.000027485647,0.00015376446,0.9944089,0.000012909076,0.0014657167,0.00008556395],"about_ca_topic_score_codex":0.000016401389,"about_ca_topic_score_gemma":3.8033428e-7,"teacher_disagreement_score":0.008244642,"about_ca_system_score_codex":0.0000105280205,"about_ca_system_score_gemma":0.0000057914476,"threshold_uncertainty_score":0.41524085},"labels":[],"label_agreement":null},{"id":"W2076974608","doi":"10.1016/j.gene.2013.12.033","title":"Novel GAA sequence variant c.1211 A&gt;G reduces enzyme activity but not protein expression in infantile and adult onset Pompe disease","year":2014,"lang":"en","type":"article","venue":"Gene","topic":"Lysosomal Storage Disorders Research","field":"Medicine","cited_by":6,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University Medical Centre","funders":"","keywords":"Biology; Missense mutation; Exon; Mutation; Molecular biology; Compound heterozygosity; Phenotype; Genetics; Gene; Gene isoform; Complementary DNA; RNA splicing; Intron; RNA","score_opus":0.02582897029699364,"score_gpt":0.2918526188015001,"score_spread":0.26602364850450644,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2076974608","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9959948,0.00015856732,0.0008991671,0.001711378,0.00004171873,0.0008353172,0.00008106525,0.0000469792,0.00023101823],"genre_scores_gemma":[0.99647886,0.00004835852,0.0023697724,0.000258903,0.0001064109,0.00014194503,0.000038748403,0.000027286573,0.0005297425],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9982631,0.00012278609,0.00020101706,0.00049775746,0.00050121406,0.0004140753],"domain_scores_gemma":[0.9989495,0.000069352885,0.00007001212,0.00042440137,0.000119064134,0.0003676652],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00033161783,0.00018769503,0.00028586038,0.00014342385,0.00009398413,0.000036974645,0.00014869357,0.000103982915,0.00008899813],"category_scores_gemma":[0.001084179,0.00015890211,0.000044763226,0.00021860564,0.00013542727,0.00016762949,0.00017689078,0.00027441428,0.000028319411],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0010703559,0.00032233016,0.0023923856,0.00013073921,0.000008656276,0.00014843277,0.00017873476,0.0000075696307,0.9907869,0.000028081118,0.00014957518,0.0047762236],"study_design_scores_gemma":[0.0022306666,0.00020128861,0.10373215,0.0002908927,0.000015925234,0.000064582186,0.000039019662,0.0030457545,0.8896747,0.00007419369,0.00041100386,0.00021980985],"about_ca_topic_score_codex":0.0006523349,"about_ca_topic_score_gemma":0.000060647617,"teacher_disagreement_score":0.10133976,"about_ca_system_score_codex":0.000078992634,"about_ca_system_score_gemma":0.00021936679,"threshold_uncertainty_score":0.647984},"labels":[],"label_agreement":null},{"id":"W2077154936","doi":"10.1016/s0378-1119(02)00560-7","title":"Characterization and expression analyses of the mouse Wiskott-Aldrich syndrome protein (WASP) family member Wave1/Scar","year":2002,"lang":"en","type":"article","venue":"Gene","topic":"Cellular Mechanics and Interactions","field":"Biochemistry, Genetics and Molecular Biology","cited_by":15,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal","funders":"Medical Research Council Canada","keywords":"Biology; Zinc finger; LIM domain; Molecular biology; Exon; Gene; Wiskott–Aldrich syndrome protein; Genetics; Cell biology; Transcription factor; Actin cytoskeleton; Cytoskeleton; Cell","score_opus":0.0263818283800829,"score_gpt":0.24737355316364978,"score_spread":0.22099172478356688,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2077154936","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9972663,0.0004322146,0.0017702469,0.00006461741,0.0000676789,0.0001728878,0.000030339303,0.0000050479307,0.00019066833],"genre_scores_gemma":[0.9958898,0.0002267422,0.00022863792,0.000066647284,0.0000456172,0.000017551789,0.00009154035,0.000013622753,0.0034198733],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9994293,0.000043244858,0.000147607,0.00018604475,0.000093235205,0.00010060499],"domain_scores_gemma":[0.99952453,0.0000019391691,0.000094292,0.00029319045,0.00005269323,0.000033341792],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00004740674,0.00009071036,0.000093571725,0.000026252066,0.00006946046,0.000013763311,0.00009488102,0.00007867073,0.00006728049],"category_scores_gemma":[0.000018371995,0.00006665275,0.0000617101,0.000076300545,0.00002253036,0.000005407065,0.00010038417,0.000050438975,0.0000044968097],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000057996117,0.000041458767,0.00004776311,0.000008455392,0.00002230128,7.5706134e-7,0.000023044882,0.0000073644856,0.99932384,0.000009740745,0.0001414485,0.00036802332],"study_design_scores_gemma":[0.00014412726,0.00006690772,0.00063785864,0.000013116702,0.000017424143,0.000017805804,0.000018485014,0.00047214807,0.9917779,0.0000059565914,0.006748277,0.000080002974],"about_ca_topic_score_codex":0.000011137504,"about_ca_topic_score_gemma":0.000002772848,"teacher_disagreement_score":0.007545953,"about_ca_system_score_codex":0.000005083807,"about_ca_system_score_gemma":0.0000068171375,"threshold_uncertainty_score":0.271802},"labels":[],"label_agreement":null},{"id":"W2077777987","doi":"10.1016/s0378-1119(01)00742-9","title":"A novel strategy for regulated expression of a cytotoxic gene","year":2001,"lang":"en","type":"article","venue":"Gene","topic":"Virus-based gene therapy research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":10,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Barnase; Biology; Transactivation; Gene; Gene expression; Cytotoxic T cell; Molecular biology; Suicide gene; Mutant; Regulation of gene expression; Transgene; Promoter; Cell biology; Genetics; RNA; Genetic enhancement; In vitro; Ribonuclease","score_opus":0.03782117441491499,"score_gpt":0.3204300083395106,"score_spread":0.28260883392459557,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2077777987","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9888907,0.00086883584,0.009571829,0.000050089486,0.000037609767,0.0003743113,0.000070938855,0.000011159341,0.00012454504],"genre_scores_gemma":[0.9949032,0.00023936715,0.003151578,0.000073241994,0.00019404975,0.000069849746,0.00022099544,0.000034029672,0.0011136937],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9990235,0.000031977717,0.00020106873,0.0003066538,0.0001463268,0.00029048324],"domain_scores_gemma":[0.99924994,0.000008896687,0.00007279574,0.00044464134,0.00014138594,0.00008236984],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00020145948,0.00012775004,0.00014421827,0.000052989857,0.000053875927,0.000009352308,0.00021541308,0.0001485192,0.00005342418],"category_scores_gemma":[0.000029431207,0.0001194784,0.00009942393,0.000117938136,0.000054753185,0.000002301601,0.000065323795,0.000046569134,0.0000045493894],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0024137397,0.00011480839,0.000047490128,0.000012907049,0.000034721994,0.0000017077875,0.000013330488,0.00070374494,0.99324924,0.000003554114,0.0004527443,0.002951987],"study_design_scores_gemma":[0.0014437805,0.002038834,0.0002320216,0.000008485289,0.000007370598,0.000021365116,0.000012821919,0.00019379905,0.9937734,0.000058866004,0.0020764207,0.0001328281],"about_ca_topic_score_codex":0.000009243717,"about_ca_topic_score_gemma":0.00003012283,"teacher_disagreement_score":0.006420251,"about_ca_system_score_codex":0.000011613371,"about_ca_system_score_gemma":0.00011075933,"threshold_uncertainty_score":0.48721877},"labels":[],"label_agreement":null},{"id":"W2078588899","doi":"10.1016/s0378-1119(00)00173-6","title":"Characterization of CaGSP1, the Candida albicans RAN/GSP1 homologue","year":2000,"lang":"en","type":"article","venue":"Gene","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":5,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal","funders":"Pfizer Canada; Pfizer","keywords":"Biology; Candida albicans; Saccharomyces cerevisiae; Complementation; Mutant; Yeast; Gene; Corpus albicans; Genetics; Fungal protein; Cell biology","score_opus":0.010652218871205892,"score_gpt":0.24109364389645568,"score_spread":0.23044142502524978,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2078588899","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99545676,0.000110088266,0.00011884799,0.00092001585,0.000046957986,0.00018828314,0.00003929155,0.00001554866,0.0031042364],"genre_scores_gemma":[0.9917645,0.00024475926,0.000047107376,0.0005710622,0.0000808066,0.000006778685,0.000088824556,0.000007073745,0.007189119],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.999421,0.000033497305,0.0001617115,0.00012392952,0.00013487533,0.00012497314],"domain_scores_gemma":[0.9995573,0.000022795699,0.00003599682,0.0002922635,0.000048279828,0.00004337599],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00013604516,0.000063537045,0.00015573125,0.00001597682,0.00005280007,0.0000035623082,0.00006135081,0.00004638981,0.001931302],"category_scores_gemma":[0.000028855571,0.000040460305,0.000058138918,0.00011280942,0.000093768926,0.000024208013,0.0000067920237,0.00007032625,0.000055760305],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00048371512,0.00010996025,0.050807413,0.000048391714,0.000046542697,0.000023498878,0.00081673206,0.000002915047,0.91521525,0.000060935294,0.00047375876,0.03191087],"study_design_scores_gemma":[0.0005510052,0.000109728244,0.8994208,0.000024315388,0.000056948487,0.000015817124,0.000070907314,0.00003784586,0.08482218,0.00004116286,0.014783344,0.00006594282],"about_ca_topic_score_codex":0.00021198702,"about_ca_topic_score_gemma":0.00018936116,"teacher_disagreement_score":0.8486134,"about_ca_system_score_codex":0.00002129437,"about_ca_system_score_gemma":0.00007409828,"threshold_uncertainty_score":0.99898106},"labels":[],"label_agreement":null},{"id":"W2078907710","doi":"10.1016/j.gene.2014.12.050","title":"Common variations in the FTO gene and obesity in Thais: A family-based study","year":2014,"lang":"en","type":"article","venue":"Gene","topic":"Nutrition, Genetics, and Disease","field":"Biochemistry, Genetics and Molecular Biology","cited_by":24,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Faculty of Graduate Studies, Dalhousie University; National Research Council of Thailand","keywords":"Biology; Thais; FTO gene; Genetics; Gene; Obesity; Gene family; Computational biology; Polymorphism (computer science); Gene expression; Allele; Endocrinology; Demography","score_opus":0.010238848824230724,"score_gpt":0.24553951542705688,"score_spread":0.23530066660282614,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2078907710","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9976246,0.000770131,0.0008966748,0.00014762837,0.00004263193,0.00032720572,0.00002329323,0.0000051255374,0.00016271955],"genre_scores_gemma":[0.99837726,0.000055923643,0.00044297014,0.0008360768,0.000111199486,0.000060486538,0.00009581956,0.000007898707,0.000012374316],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9991902,0.0002086862,0.00014494345,0.00022660509,0.00008860019,0.00014095279],"domain_scores_gemma":[0.9995536,0.000018101206,0.000029299907,0.00032776027,0.000025933856,0.000045261815],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003200648,0.00009181873,0.00009665978,0.00004453066,0.000061645784,0.000021726233,0.00013223346,0.000058639635,0.000002559584],"category_scores_gemma":[0.000036282843,0.000079202466,0.00002682984,0.00008779984,0.000027801236,0.0000016531194,0.000041627347,0.000048231115,0.0000022445067],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010317956,0.001435428,0.8122503,0.000018341978,0.000015025367,0.0000075581347,0.00045245347,0.0002404214,0.18430893,0.000047964502,0.00037772275,0.0007426281],"study_design_scores_gemma":[0.002100352,0.00030419967,0.97872645,0.000005022025,0.000021099695,0.0000014919111,0.00030952116,0.00033947502,0.01646923,0.00048461164,0.001096887,0.00014164472],"about_ca_topic_score_codex":0.00013531347,"about_ca_topic_score_gemma":0.0009894317,"teacher_disagreement_score":0.1678397,"about_ca_system_score_codex":0.0000073379833,"about_ca_system_score_gemma":0.00003720065,"threshold_uncertainty_score":0.32297826},"labels":[],"label_agreement":null},{"id":"W2079312210","doi":"10.1016/j.gene.2013.02.008","title":"Identification of a SLC19A2 nonsense mutation in Persian families with thiamine-responsive megaloblastic anemia","year":2013,"lang":"en","type":"article","venue":"Gene","topic":"Alcoholism and Thiamine Deficiency","field":"Medicine","cited_by":25,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"SickKids Foundation; Hospital for Sick Children; University of Toronto","funders":"Wellcome Trust","keywords":"Megaloblastic anemia; Anemia; Nonsense mutation; Thiamine; Diabetes mellitus; Biology; Population; Medicine; Pediatrics; Genetics; Mutation; Internal medicine; Endocrinology; Gene; Missense mutation","score_opus":0.0074036899282806205,"score_gpt":0.2362830175883162,"score_spread":0.2288793276600356,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2079312210","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99764854,0.00015429141,0.00058619335,0.0003866811,0.00005533086,0.00044341377,0.000008341716,0.000021337139,0.00069588143],"genre_scores_gemma":[0.9987016,0.000018055025,0.00046603428,0.000071137496,0.000029788836,0.000034875753,0.000038092367,0.000012757513,0.00062767265],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9991334,0.000039138085,0.0002739307,0.00019250435,0.00020741715,0.00015361693],"domain_scores_gemma":[0.9993323,0.000072908006,0.00011429242,0.00023300176,0.00019490876,0.00005258033],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013997564,0.0001046573,0.00019263715,0.00024118937,0.000029312789,0.000010265935,0.00005055495,0.00005610103,0.00004754293],"category_scores_gemma":[0.00018972454,0.00008072881,0.000030852985,0.000339813,0.0000977984,0.00010214625,0.000012998907,0.000083511295,0.0000904173],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005857884,0.00018305206,0.010361265,0.00020856623,0.00003058043,0.00012269188,0.0067359614,0.00025887016,0.9785765,0.00025733237,0.000292006,0.0023874023],"study_design_scores_gemma":[0.0033646647,0.0009824957,0.71073717,0.00014913442,0.00017086217,0.00039634472,0.008537329,0.0043110545,0.27091184,0.00015787552,0.0000373907,0.00024383617],"about_ca_topic_score_codex":0.00026454453,"about_ca_topic_score_gemma":0.00003990059,"teacher_disagreement_score":0.70766467,"about_ca_system_score_codex":0.00003890999,"about_ca_system_score_gemma":0.00008831628,"threshold_uncertainty_score":0.3292025},"labels":[],"label_agreement":null},{"id":"W2079636726","doi":"10.1016/j.gene.2009.10.005","title":"Molecular mechanisms of turtle anoxia tolerance: A role for NF-κB","year":2009,"lang":"en","type":"article","venue":"Gene","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":50,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Carleton University","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Biology; P50; Transcription factor; Messenger RNA; Phosphorylation; Transcription (linguistics); Effector; NF-κB; Molecular biology; Gene; Cell biology; Gene expression; Protein subunit; Signal transduction; Biochemistry","score_opus":0.006324671686348991,"score_gpt":0.23176137551446083,"score_spread":0.22543670382811185,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2079636726","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9722025,0.0069943354,0.018326158,0.00027458824,0.0004160213,0.0002719867,0.000045003657,0.00004148971,0.0014279422],"genre_scores_gemma":[0.99627835,0.000021212849,0.0009554913,0.00049540197,0.000010730335,0.000013062484,0.000037915874,0.000008224571,0.0021796285],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99942523,0.000047064426,0.00016428284,0.0001375424,0.000016857746,0.00020903908],"domain_scores_gemma":[0.99966484,0.000022059325,0.000053919717,0.00019367712,0.0000565298,0.000008988846],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00008973699,0.00009475866,0.00018722164,0.000050796527,0.00004555348,0.0000037964414,0.00013857549,0.00012639227,0.00022352612],"category_scores_gemma":[0.00002677607,0.000085115935,0.000102890954,0.00004655486,0.000032616128,0.000022670716,0.000018222645,0.00006466649,0.00010679417],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00041162438,0.00007601767,0.0000013772776,0.0000046032847,0.00003970799,0.0000011455037,0.00011375729,0.000008503481,0.9888249,0.00440276,0.0009669986,0.005148617],"study_design_scores_gemma":[0.0008044958,0.000559422,0.00014634717,0.00001164914,0.000017481827,0.00002329463,0.000060734626,0.0000105145145,0.9817615,0.0030141794,0.013498236,0.00009212636],"about_ca_topic_score_codex":0.000007134718,"about_ca_topic_score_gemma":7.7183387e-7,"teacher_disagreement_score":0.024075856,"about_ca_system_score_codex":0.00000988712,"about_ca_system_score_gemma":0.000029231003,"threshold_uncertainty_score":0.34709272},"labels":[],"label_agreement":null},{"id":"W2079675652","doi":"10.1016/j.gene.2005.05.024","title":"Double hairpin elements and tandem repeats in the non-coding region of Adenoides eludens chloroplast gene minicircles","year":2005,"lang":"en","type":"article","venue":"Gene","topic":"Protist diversity and phylogeny","field":"Biochemistry, Genetics and Molecular Biology","cited_by":28,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"Phycological Society of America","keywords":"Minicircle; Biology; Genetics; Tandem repeat; Genome; Gene; Tandem exon duplication; Direct repeat; Inverted repeat","score_opus":0.018414843235043988,"score_gpt":0.24137427620962848,"score_spread":0.22295943297458448,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2079675652","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99804366,0.0009546116,0.00025881393,0.00016153933,0.00003548664,0.0001667019,0.000010449528,0.000002657598,0.0003660857],"genre_scores_gemma":[0.9981571,0.00054782216,0.00072629313,0.00019681288,0.00015188217,0.0000072191547,0.00003723519,0.000005952552,0.00016971174],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9993631,0.000027944356,0.0001578892,0.00020372575,0.000091014,0.00015629144],"domain_scores_gemma":[0.99964875,0.0000069278967,0.000074768555,0.00021627115,0.000024653056,0.00002865529],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00018863447,0.00008534215,0.000101499274,0.000030090418,0.000070685484,0.000012251188,0.00016703855,0.00008208977,0.000004673647],"category_scores_gemma":[0.00001141165,0.00007535854,0.000037295114,0.00005521817,0.000056176144,0.0000043731434,0.000100553676,0.00005321145,0.0000028991808],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012590898,0.000067075554,0.07285445,0.000018053272,0.00003652179,0.00001693534,0.00048504848,0.000045243763,0.92276543,0.000023321034,0.0008580525,0.0027039356],"study_design_scores_gemma":[0.0012002366,0.00014741143,0.10157992,0.000017916565,0.000018888531,0.00006698211,0.00018497766,0.000039923234,0.8940523,0.000027824797,0.0025332149,0.0001303628],"about_ca_topic_score_codex":0.00003399551,"about_ca_topic_score_gemma":0.00016261081,"teacher_disagreement_score":0.028725473,"about_ca_system_score_codex":0.000009050658,"about_ca_system_score_gemma":0.000019734105,"threshold_uncertainty_score":0.30730322},"labels":[],"label_agreement":null},{"id":"W2080234178","doi":"10.1016/j.gene.2014.01.034","title":"Identification of the centromere-specific histone H3 variant in Lotus japonicus","year":2014,"lang":"en","type":"article","venue":"Gene","topic":"Chromosomal and Genetic Variations","field":"Agricultural and Biological Sciences","cited_by":9,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Leibniz-Institut für Pflanzengenetik und Kulturpflanzenforschung; Institute of Genetics; RIKEN; University of Miyazaki","keywords":"Centromere; Biology; Lotus japonicus; Histone H3; Genetics; Chromosome; Lotus; Metaphase; Gene; Histone; Molecular biology; Botany; Mutant","score_opus":0.011231431019696694,"score_gpt":0.20035090755276075,"score_spread":0.18911947653306405,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2080234178","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99750674,0.00019214962,0.000028762723,0.0015241612,0.00023654531,0.00010352515,0.000018410432,0.000008546607,0.00038116446],"genre_scores_gemma":[0.99945694,0.000033652428,0.000039031514,0.000043463686,0.00011227613,0.0000065177287,0.00001269228,3.8069433e-7,0.00029502023],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99938273,0.000060817565,0.00019857693,0.00013581729,0.00011140367,0.0001106541],"domain_scores_gemma":[0.99974006,0.000042828047,0.00008525982,0.0000806695,0.000027698243,0.000023495106],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015403285,0.00004989944,0.000075096985,0.000005787292,0.00007090635,0.000011610883,0.00018067026,0.0000355517,0.00020975561],"category_scores_gemma":[0.000024293797,0.000016979158,0.000044466437,0.00024303423,0.000029337334,0.000018898896,0.000039784805,0.000038743074,0.00003359633],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000003150884,0.0000542723,0.00089751196,0.0000011104281,0.0000018536738,2.5119584e-7,0.00006185194,0.000037799025,0.97848636,0.0016823378,0.00007357661,0.018699944],"study_design_scores_gemma":[0.0001241649,0.000033130833,0.9176016,0.0000054996194,0.0000048196835,0.0000055521527,0.000026289763,0.00030441183,0.063384034,0.0020339317,0.01640881,0.000067751746],"about_ca_topic_score_codex":0.00013724859,"about_ca_topic_score_gemma":0.00039488575,"teacher_disagreement_score":0.9167041,"about_ca_system_score_codex":0.000021244443,"about_ca_system_score_gemma":0.000004432051,"threshold_uncertainty_score":0.22966768},"labels":[],"label_agreement":null},{"id":"W2080675094","doi":"10.1016/j.gene.2012.01.027","title":"Loss of the Prader–Willi obesity syndrome protein necdin promotes adipogenesis","year":2012,"lang":"en","type":"article","venue":"Gene","topic":"Genetic Syndromes and Imprinting","field":"Biochemistry, Genetics and Molecular Biology","cited_by":27,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"Canadian Institutes of Health Research; Alberta Innovates","keywords":"Adipogenesis; Biology; Obesity; Transcription factor; Endocrinology; Receptor; Internal medicine; Gene; Cell biology; Adipose tissue; Biochemistry","score_opus":0.010178052027303734,"score_gpt":0.21682648000981516,"score_spread":0.20664842798251143,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2080675094","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9970071,0.0018076877,0.00024787092,0.00015536798,0.00018033481,0.00040126682,0.00001205602,0.0000081699445,0.0001801966],"genre_scores_gemma":[0.9970141,0.000028331147,0.0018999798,0.000053543612,0.00013510365,0.000032596847,0.000010384088,0.000023409497,0.00080253783],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9989695,0.00007368938,0.0002175621,0.00022102156,0.00015673373,0.00036147734],"domain_scores_gemma":[0.9991932,0.0000046202267,0.00013015694,0.0005326488,0.000052276817,0.00008709321],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00024044205,0.00014890046,0.0001548986,0.000020371785,0.00008908312,0.00000952845,0.0002924279,0.00012713103,0.00004149531],"category_scores_gemma":[0.00007574748,0.000110597175,0.0001303321,0.00011585191,0.0000849326,0.0000038252115,0.00026996256,0.0000592285,0.000015995472],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000010387301,0.000091747046,0.14218827,0.00003688382,0.000048122554,2.6016156e-7,0.000047764534,0.0000068578624,0.8565395,0.000020614712,0.00006230909,0.0009566289],"study_design_scores_gemma":[0.00014223071,0.00008244561,0.32430312,0.000015883841,0.000020304133,0.00013803653,0.000018669047,0.000004250896,0.6722792,0.000021320406,0.0028604784,0.00011409798],"about_ca_topic_score_codex":0.000027566888,"about_ca_topic_score_gemma":0.0000039822,"teacher_disagreement_score":0.18426034,"about_ca_system_score_codex":0.00000900058,"about_ca_system_score_gemma":0.000049382023,"threshold_uncertainty_score":0.4510022},"labels":[],"label_agreement":null},{"id":"W2082629281","doi":"10.1016/s0378-1119(00)00028-7","title":"Isolation and analysis of two cellulase cDNAs from Orpinomyces joyonii","year":2000,"lang":"en","type":"article","venue":"Gene","topic":"Enzyme Production and Characterization","field":"Biochemistry, Genetics and Molecular Biology","cited_by":39,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Agriculture and Agri-Food Canada","funders":"","keywords":"Biology; Laminarin; Complementary DNA; Biochemistry; Open reading frame; Cellulase; Glycosyl; Peptide sequence; Nucleic acid sequence; Amino acid; Glycoside hydrolase; Protein primary structure; Sequence analysis; Molecular biology; Enzyme; Gene","score_opus":0.006346860847070576,"score_gpt":0.22491451258891204,"score_spread":0.21856765174184145,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2082629281","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9969441,0.00044845682,0.002209284,0.00006999021,0.000031794203,0.00003082713,0.00003975869,0.0000044822787,0.00022130545],"genre_scores_gemma":[0.9966601,0.0003123607,0.0009400496,0.000075195705,0.0001124528,0.0000019678491,0.0011722838,0.0000042781994,0.0007213015],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9996338,0.000019910247,0.00010146841,0.00015687323,0.000039229926,0.00004872516],"domain_scores_gemma":[0.9997724,0.0000017990996,0.0000405849,0.00013597075,0.00002642122,0.000022818293],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000033597025,0.000047822443,0.00007409753,0.000035743273,0.000023999488,0.0000075197336,0.000029629562,0.000035891615,0.00040497255],"category_scores_gemma":[0.0000043803693,0.000047733898,0.000032712658,0.00011135084,0.000019414127,0.000002722161,0.000010668818,0.000014718433,0.000004149248],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00002270694,0.0000154231,0.013304678,0.000001454531,0.00011056434,1.4403639e-7,0.00003710552,0.00016611842,0.9812373,0.0000051393035,0.000040203355,0.005059187],"study_design_scores_gemma":[0.00019244284,0.000028863593,0.03730874,0.0000010395402,0.00014434686,6.542373e-7,0.000008029719,0.0010963192,0.955888,0.000019169638,0.00524991,0.00006249075],"about_ca_topic_score_codex":0.000035540543,"about_ca_topic_score_gemma":0.0000184893,"teacher_disagreement_score":0.025349282,"about_ca_system_score_codex":0.0000019329163,"about_ca_system_score_gemma":0.0000071105883,"threshold_uncertainty_score":0.44341654},"labels":[],"label_agreement":null},{"id":"W2082935987","doi":"10.1016/j.gene.2004.07.026","title":"Identification of the putative collagen X gene from the pufferfish Fugu rubripes","year":2004,"lang":"en","type":"article","venue":"Gene","topic":"Osteoarthritis Treatment and Mechanisms","field":"Medicine","cited_by":6,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Western University","funders":"British Antarctic Survey; Canadian Arthritis Network; Canada Research Chairs; Arthritis Society","keywords":"Fugu; Biology; Gene; Intron; Genetics; Gene expression; Exon; Molecular biology; Genome","score_opus":0.012531762663054957,"score_gpt":0.2388360900720205,"score_spread":0.22630432740896556,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2082935987","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9952283,0.0011727785,0.00033883945,0.001970808,0.00031719808,0.0005557844,0.00013529185,0.000021654183,0.00025933736],"genre_scores_gemma":[0.99783105,0.00007064705,0.00059407076,0.000355324,0.00016659808,0.000035572244,0.0000819924,0.00001222624,0.0008524943],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99929076,0.00003791321,0.00019075398,0.00015440071,0.0002113466,0.00011482454],"domain_scores_gemma":[0.99939466,0.00003504509,0.00010695836,0.0003462888,0.00008128016,0.0000357477],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00010261537,0.000087945155,0.00013691353,0.000015626209,0.00010323326,0.000014089178,0.000113124304,0.000047589732,0.00004344454],"category_scores_gemma":[0.000046492103,0.000049687438,0.00008354484,0.00014317206,0.0000644292,0.00003423306,0.00002635624,0.000040951618,0.000052135707],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000042880616,0.00007504183,0.0008776556,0.0000038347453,0.000058038313,0.000007704498,0.0012273128,0.000013438025,0.99036396,0.00036392946,0.00011115276,0.006855075],"study_design_scores_gemma":[0.0016643681,0.00017254824,0.02235839,0.000028668652,0.00015971958,0.000012072375,0.00027608025,0.0000030505878,0.9711377,0.0035975038,0.00054095633,0.00004892437],"about_ca_topic_score_codex":0.00007337953,"about_ca_topic_score_gemma":0.000059936334,"teacher_disagreement_score":0.021480734,"about_ca_system_score_codex":0.000049595772,"about_ca_system_score_gemma":0.00008169424,"threshold_uncertainty_score":0.2026195},"labels":[],"label_agreement":null},{"id":"W2082998114","doi":"10.1016/s0378-1119(00)00464-9","title":"Genomic characterization of the human and mouse protein tyrosine phosphatase-1B genes","year":2000,"lang":"en","type":"article","venue":"Gene","topic":"Protein Tyrosine Phosphatases","field":"Biochemistry, Genetics and Molecular Biology","cited_by":42,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Concordia University; Merck Canada Inc. (Canada)","funders":"","keywords":"Biology; Gene; Locus (genetics); Genetics; Exon; Intron; Protein tyrosine phosphatase; Synteny; Molecular biology; Genomic organization; Chromosome; Genome; Signal transduction","score_opus":0.006516928278608045,"score_gpt":0.2095955142841295,"score_spread":0.20307858600552148,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2082998114","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9913526,0.0076589156,0.00005100654,0.00008266948,0.000024243476,0.00041078357,0.00037971008,0.000009137229,0.000030933177],"genre_scores_gemma":[0.99675316,0.0003927298,0.00034154736,0.00014317349,0.00011752646,0.000047576465,0.000717219,0.000022950542,0.0014641288],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99932855,0.00003509749,0.00017587327,0.00023274875,0.00008173068,0.00014601219],"domain_scores_gemma":[0.99943614,0.0000012033312,0.00008555349,0.00040650903,0.000031652282,0.000038962986],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00007183182,0.00012119162,0.00010550172,0.00001326716,0.00009881749,0.000015717093,0.00018251651,0.00007045873,0.00008155538],"category_scores_gemma":[0.000010132444,0.00009780218,0.000039738396,0.00005965456,0.000101310005,0.0000045466113,0.000102521146,0.000036813362,0.000006195926],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000031802618,0.00003838422,0.0010025676,0.000016317923,0.000015004978,4.229736e-7,0.000008929842,0.0000054948464,0.9917051,0.00015850308,0.000069101596,0.006948352],"study_design_scores_gemma":[0.00038900753,0.000078988436,0.014765041,0.000009542719,0.000011693178,0.0000055835703,0.0000012670347,0.000005435758,0.9736625,0.00002672055,0.0109325005,0.00011174923],"about_ca_topic_score_codex":0.00004008388,"about_ca_topic_score_gemma":0.0000075153844,"teacher_disagreement_score":0.018042648,"about_ca_system_score_codex":0.0000064422625,"about_ca_system_score_gemma":0.000026709053,"threshold_uncertainty_score":0.3988257},"labels":[],"label_agreement":null},{"id":"W2083220408","doi":"10.1016/j.gene.2014.08.042","title":"Identification of Mytilus edulis genetic regulators during early development","year":2014,"lang":"en","type":"article","venue":"Gene","topic":"Marine Bivalve and Aquaculture Studies","field":"Environmental Science","cited_by":30,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université du Québec à Rimouski","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Biology; Transcriptome; Computational biology; Mytilus; Evolutionary biology; Microarray; Gene; Genetics; Ecology; Gene expression","score_opus":0.00458303015228051,"score_gpt":0.19378762158908164,"score_spread":0.18920459143680113,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2083220408","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9967568,0.000026619045,0.000356502,0.00005595527,0.000057847206,0.00006429213,4.833043e-7,0.000013948144,0.002667565],"genre_scores_gemma":[0.99530387,0.000008602507,0.0019370486,0.000015444966,0.000037998394,0.000007937299,0.0000014022575,0.000005217964,0.0026824845],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.999358,0.000014872155,0.00018721935,0.00015669104,0.0001704588,0.00011278253],"domain_scores_gemma":[0.9997331,0.0000043895,0.00007265017,0.00015141672,0.000007022998,0.000031447224],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009397845,0.00006590689,0.00007734172,0.000014271054,0.000087699256,0.000007498749,0.00010612358,0.000020856725,0.00016925581],"category_scores_gemma":[0.000015484151,0.00005615754,0.000026450123,0.00008299371,0.000050844872,0.000035006906,0.00013610769,0.000022907707,0.00020362264],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000051086913,0.000026583075,0.14660263,0.000017152812,0.00001799016,4.551626e-7,0.0010860192,0.00024084632,0.8354876,0.000026184216,0.00027763617,0.016211763],"study_design_scores_gemma":[0.000064994856,0.000006950471,0.7161507,0.0000021550131,0.0000044967014,7.418713e-7,0.0000116504925,0.000016730855,0.28032118,0.00006330332,0.0033033367,0.00005376322],"about_ca_topic_score_codex":0.000045613848,"about_ca_topic_score_gemma":0.000030555457,"teacher_disagreement_score":0.5695481,"about_ca_system_score_codex":0.000030894582,"about_ca_system_score_gemma":0.000002715543,"threshold_uncertainty_score":0.2617225},"labels":[],"label_agreement":null},{"id":"W2084238742","doi":"10.1016/j.gene.2005.11.021","title":"The plastid-encoded psbA gene in the dinoflagellate Gonyaulax is not encoded on a minicircle","year":2006,"lang":"en","type":"article","venue":"Gene","topic":"Microbial Community Ecology and Physiology","field":"Environmental Science","cited_by":11,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal","funders":"","keywords":"Plastid; Biology; Minicircle; Dinoflagellate; Genome; Gene; Genetics; Nuclear gene; Evolutionary biology; Botany; Chloroplast","score_opus":0.010083609511122157,"score_gpt":0.2144507708288448,"score_spread":0.20436716131772265,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2084238742","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.987656,0.00004221516,0.000017185428,0.0016933518,0.00015894554,0.00020116945,0.000016662698,0.000014991567,0.010199507],"genre_scores_gemma":[0.99562544,0.000051263363,0.00011155385,0.0031355508,0.00006816866,0.0000189971,0.00002066947,0.000008865322,0.0009594731],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9986993,0.00037743428,0.00021357983,0.0002280876,0.00012006211,0.0003615387],"domain_scores_gemma":[0.9988941,0.00044827,0.000070879,0.00055713457,0.0000038943404,0.000025753918],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00048919715,0.00013334956,0.00013146823,0.00001857636,0.0005084644,0.000023060777,0.000715314,0.00010611603,0.001032509],"category_scores_gemma":[0.000023787035,0.00008544585,0.000059734877,0.00018361548,0.00027764848,0.000038525824,0.0002020295,0.0002923553,0.0011852887],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00017345492,0.00021403203,0.0028050484,0.0000021462124,0.000011184076,0.000015977583,0.0013553643,0.0058969646,0.93154633,0.00013270706,0.056628875,0.0012179392],"study_design_scores_gemma":[0.0014109154,0.000511773,0.43436995,0.00000974932,0.000027631439,0.000041971092,0.00025979886,0.001249231,0.45093715,0.008061998,0.102604926,0.0005148765],"about_ca_topic_score_codex":0.00094065757,"about_ca_topic_score_gemma":0.004826278,"teacher_disagreement_score":0.48060915,"about_ca_system_score_codex":0.0000652924,"about_ca_system_score_gemma":0.000011248538,"threshold_uncertainty_score":0.9998807},"labels":[],"label_agreement":null},{"id":"W2084358117","doi":"10.1016/j.gene.2006.02.023","title":"Assessing the microsporidia-fungi relationship: Combined phylogenetic analysis of eight genes","year":2006,"lang":"en","type":"article","venue":"Gene","topic":"Parasitic Infections and Diagnostics","field":"Immunology and Microbiology","cited_by":112,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"Natural Sciences and Engineering Research Council of Canada; Dalhousie University","keywords":"Microsporidia; Biology; Phylogenetic tree; Clade; Obligate; Phylogenetics; Phylum; Evolutionary biology; Gene; Genetics; Zoology; Botany; Spore","score_opus":0.013832897445830704,"score_gpt":0.270931112565684,"score_spread":0.25709821511985326,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2084358117","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9880846,0.0073573077,0.0026874905,0.000059207196,0.0003502861,0.00008819859,0.000052044856,0.000018759814,0.0013021093],"genre_scores_gemma":[0.99854594,0.000057863766,0.0003173017,0.00004115466,0.00003435304,0.000009929165,0.0003640884,0.0000067295914,0.00062266405],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9992807,0.00011137448,0.00026591605,0.0001417243,0.000024993553,0.00017529263],"domain_scores_gemma":[0.99904156,0.0004659961,0.00012253059,0.00027848154,0.00008410954,0.000007352371],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00017157136,0.00009373779,0.00020005158,0.00016038149,0.00026555854,0.000018769328,0.00010305309,0.00011738979,0.0001947201],"category_scores_gemma":[0.000045379646,0.00006994784,0.00013276261,0.0005840223,0.000149947,0.000031959105,0.000025568845,0.00009066901,0.0000848454],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000045355227,0.000091294874,0.46082908,0.0000027047313,0.0003744147,0.000001340539,0.000032204207,0.0018573029,0.5342165,0.0015600004,0.00060736795,0.0004232432],"study_design_scores_gemma":[0.00025486576,0.000022305001,0.781797,0.0000026418663,0.000819811,0.00000801674,0.000030034586,0.000051026742,0.21427658,0.00034392928,0.0023165108,0.000077259276],"about_ca_topic_score_codex":0.0002279205,"about_ca_topic_score_gemma":0.000044025648,"teacher_disagreement_score":0.3209679,"about_ca_system_score_codex":0.000017553697,"about_ca_system_score_gemma":0.000037838174,"threshold_uncertainty_score":0.28523904},"labels":[],"label_agreement":null},{"id":"W2085106140","doi":"10.1016/s0378-1119(00)00241-9","title":"Sequence and expression analysis of a surface antigen gene family of the rickettsia Anaplasma marginale","year":2000,"lang":"en","type":"article","venue":"Gene","topic":"Vector-borne infectious diseases","field":"Immunology and Microbiology","cited_by":47,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institute of Allergy and Infectious Diseases; Groupe canadien de recherche en soins intensifs","keywords":"Biology; Gene; Genetics; Anaplasmosis; Antigenic variation; Genome; Anaplasmataceae; Whole genome sequencing; Gene family; Virology; Rickettsiales; Tick","score_opus":0.014027714807771128,"score_gpt":0.23410719069902355,"score_spread":0.22007947589125243,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2085106140","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9936706,0.005580677,0.000035474135,0.000026538943,0.00006652177,0.00011026317,0.00019627067,0.000017696791,0.00029599966],"genre_scores_gemma":[0.99859554,0.00067681423,0.00013834564,0.000045977355,0.0000059654435,0.0000028208117,0.000036703634,0.000007173801,0.00049067696],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9992148,0.0001592516,0.00021237507,0.0002084485,0.0000406625,0.00016440482],"domain_scores_gemma":[0.9993874,0.00005500275,0.000120028635,0.00036682762,0.000053993026,0.000016741216],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000098194716,0.00010766905,0.00027888975,0.000075663396,0.0000853247,0.000003631434,0.0001689265,0.00009938371,0.0006503223],"category_scores_gemma":[0.000016784717,0.00007882557,0.00012489948,0.0004790593,0.00023492132,0.000037348807,0.000056091765,0.00007017976,0.000020429014],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000059325244,0.000060510854,0.12876903,0.000007506036,0.00045430046,0.000001384998,0.00013180908,0.00070069835,0.8685501,0.000004909295,0.0002910399,0.00096933433],"study_design_scores_gemma":[0.00022924949,0.00004071075,0.3909011,0.000009167272,0.00026176948,0.000007913707,0.00002346629,0.00002492993,0.60772026,0.000012799649,0.0007067254,0.0000619364],"about_ca_topic_score_codex":0.00038220512,"about_ca_topic_score_gemma":0.000039545248,"teacher_disagreement_score":0.26213205,"about_ca_system_score_codex":0.000013805173,"about_ca_system_score_gemma":0.000043388107,"threshold_uncertainty_score":0.71205735},"labels":[],"label_agreement":null},{"id":"W2085368314","doi":"10.1016/s0378-1119(00)00211-0","title":"Mutational analysis of bli-4/kpc-4 reveals critical residues required for proprotein convertase function in C. elegans","year":2000,"lang":"en","type":"article","venue":"Gene","topic":"Genetics, Aging, and Longevity in Model Organisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":25,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"Biology; Genetics; Mutant; Mutation; Proprotein convertase; Missense mutation; Gene; Null allele; Serine protease; Molecular biology; Protease; Biochemistry; Enzyme","score_opus":0.013439277724823128,"score_gpt":0.26956020052589674,"score_spread":0.2561209228010736,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2085368314","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9834393,0.0005160736,0.015157419,0.00026399852,0.000060793405,0.0002924453,0.00014066265,0.000007925019,0.00012134548],"genre_scores_gemma":[0.9932449,0.000057415167,0.004612308,0.00024733605,0.00013048464,0.00005874793,0.00065910746,0.000016468724,0.00097326434],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9989163,0.000065061766,0.0003282138,0.0003313884,0.0001440814,0.00021494305],"domain_scores_gemma":[0.9994416,0.00002357362,0.000054512264,0.00027694998,0.00014527953,0.000058039182],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002636202,0.000119315126,0.00022236198,0.00015699142,0.000047914025,0.000013688147,0.00011106024,0.00013977278,0.0002144812],"category_scores_gemma":[0.00013139726,0.00012482253,0.00012798635,0.00022929953,0.00009084391,0.0000050485555,0.000017859387,0.000048909136,0.000005926654],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00036714727,0.00018847473,0.003958488,0.000053935866,0.00026726295,0.0000025430168,0.0002528558,0.0028199868,0.98949903,0.00020846048,0.0006038902,0.0017779131],"study_design_scores_gemma":[0.0010523325,0.00076451723,0.030145582,0.000013674211,0.00057108275,0.0000052043024,0.00006883382,0.0022367246,0.96021545,0.002132607,0.0024874788,0.00030652125],"about_ca_topic_score_codex":0.00007621866,"about_ca_topic_score_gemma":0.00025783977,"teacher_disagreement_score":0.0292836,"about_ca_system_score_codex":0.000012729802,"about_ca_system_score_gemma":0.00006992594,"threshold_uncertainty_score":0.5090115},"labels":[],"label_agreement":null},{"id":"W2088163042","doi":"10.1016/j.gene.2005.05.007","title":"Chromosomal rearrangements are associated with higher rates of molecular evolution in mammals","year":2005,"lang":"en","type":"article","venue":"Gene","topic":"Chromosomal and Genetic Variations","field":"Agricultural and Biological Sciences","cited_by":24,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Genome Canada","keywords":"Biology; Genetic algorithm; Genetics; Divergence (linguistics); Evolutionary biology; Gene; Molecular evolution; Genome; Neutral theory of molecular evolution; Breakpoint; Gene duplication; Gene rearrangement; Chromosome","score_opus":0.015442493055721873,"score_gpt":0.21558161949078383,"score_spread":0.20013912643506196,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2088163042","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99823946,0.00018571186,0.0000016830072,0.0009735693,0.00002450824,0.00010831964,0.000039205777,0.0000146129805,0.00041292363],"genre_scores_gemma":[0.99943364,0.000005968023,0.00011943541,0.00005865689,0.000069010515,0.000011266392,0.000057164005,6.556876e-7,0.00024418143],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99941444,0.00003967777,0.00013289793,0.00013670801,0.00013431991,0.00014197869],"domain_scores_gemma":[0.9997861,0.00002039242,0.00008154011,0.000033708387,0.000047760783,0.000030531814],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000067612025,0.00006858243,0.00010411217,0.000009369685,0.000036038968,0.00000794293,0.00007914594,0.00005069476,0.00042696434],"category_scores_gemma":[0.000013212033,0.000027775419,0.00002740128,0.0002724965,0.000021784028,0.000038345595,0.000021382695,0.000033232314,0.000015060084],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000010303393,0.00011372949,0.10896411,0.0000012333196,0.0000140835045,0.0000033873723,0.000019027142,0.00017947369,0.8894543,0.00007453698,0.00002613111,0.0011396556],"study_design_scores_gemma":[0.00022775515,0.00009742007,0.9279499,0.000024047335,0.000008003707,9.1312666e-7,0.000019735819,0.000040652016,0.07105924,0.0001780468,0.0003206239,0.000073654366],"about_ca_topic_score_codex":0.00009969551,"about_ca_topic_score_gemma":0.0013584817,"teacher_disagreement_score":0.8189858,"about_ca_system_score_codex":0.000036153484,"about_ca_system_score_gemma":0.000005428421,"threshold_uncertainty_score":0.467496},"labels":[],"label_agreement":null},{"id":"W2088920689","doi":"10.1016/j.gene.2012.06.093","title":"Expression and epigenetic dynamics of transcription regulator Lhx8 during mouse oogenesis","year":2012,"lang":"en","type":"article","venue":"Gene","topic":"Epigenetics and DNA Methylation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":23,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"National Key Research and Development Program of China; National Natural Science Foundation of China","keywords":"Biology; Epigenetics; Regulator; Oogenesis; Transcription (linguistics); Genetics; Transcription factor; DNA methylation; Cell biology; Computational biology; Gene expression; Gene; Embryogenesis","score_opus":0.008107353006266083,"score_gpt":0.2217267377014384,"score_spread":0.2136193846951723,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2088920689","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98546976,0.009016402,0.005192263,0.000019685678,0.000101511294,0.000107733205,0.00002396084,0.0000070610354,0.000061606195],"genre_scores_gemma":[0.9949787,0.001804372,0.0026249415,0.000007854088,0.0001555311,0.000008891141,0.000097130884,0.000022046932,0.00030047685],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99929804,0.000044318003,0.00018834477,0.00017906433,0.000099568926,0.00019069506],"domain_scores_gemma":[0.9995443,0.00000405951,0.00007583112,0.0002390285,0.000043397904,0.00009338182],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013755061,0.000108446075,0.00010975736,0.000033287488,0.00005742623,0.0000064899423,0.00006104844,0.00012942785,0.000012526197],"category_scores_gemma":[0.000016837865,0.00010810619,0.000049970662,0.00004703158,0.00004007736,0.000004986634,0.00004349565,0.000028799888,0.0000012996013],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000035964076,0.000037402428,0.015337814,0.000030523977,0.000012619311,1.0656814e-7,0.00006413301,0.00007938967,0.9820133,0.000013469791,0.00000589715,0.0023693736],"study_design_scores_gemma":[0.00028446838,0.00005997353,0.052281898,0.000007129639,0.000017988628,0.0000021231128,0.000028077482,0.000066320245,0.94685435,0.00003124703,0.00024969812,0.00011674005],"about_ca_topic_score_codex":0.000008671737,"about_ca_topic_score_gemma":0.000009618321,"teacher_disagreement_score":0.036944084,"about_ca_system_score_codex":0.000011387596,"about_ca_system_score_gemma":0.000011104898,"threshold_uncertainty_score":0.44084427},"labels":[],"label_agreement":null},{"id":"W2088957831","doi":"10.1016/j.gene.2013.06.085","title":"Resistin disrupts glycogen synthesis under high insulin and high glucose levels by down-regulating the hepatic levels of GSK3β","year":2013,"lang":"en","type":"article","venue":"Gene","topic":"Adipokines, Inflammation, and Metabolic Diseases","field":"Medicine","cited_by":21,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Canadian Institutes of Health Research","keywords":"Internal medicine; Endocrinology; Biology; Glycogen; Glycogen synthase; Insulin; Resistin; Insulin receptor; Gluconeogenesis; GSK-3; Carbohydrate metabolism; Insulin receptor substrate; Insulin resistance; Protein kinase B; IRS2; Kinase; Phosphorylation; Metabolism; Biochemistry; Medicine; Adiponectin","score_opus":0.019709602032357557,"score_gpt":0.2486528137893093,"score_spread":0.22894321175695176,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2088957831","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99258137,0.003706206,0.0005559457,0.0020662684,0.00009960184,0.00055451016,0.00019672429,0.000045399363,0.00019398777],"genre_scores_gemma":[0.99630976,0.00022579936,0.0017730647,0.0003374988,0.00023960393,0.00008737278,0.000038037033,0.000032148102,0.00095668994],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99852234,0.000109197026,0.0004821275,0.0002757997,0.00033761494,0.00027290804],"domain_scores_gemma":[0.9986074,0.00035978027,0.0002187498,0.00046447964,0.00017635987,0.00017325008],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002545843,0.00021029286,0.00041498034,0.000071088274,0.0001457344,0.00002938635,0.00012909094,0.000086263826,0.00070339587],"category_scores_gemma":[0.00052355253,0.00014008862,0.00007360266,0.00018485874,0.00017630096,0.0001190885,0.000066543646,0.00007583571,0.000042938318],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00027317417,0.00039263596,0.011208225,0.00066259765,0.0007128239,0.000012641611,0.0012497734,0.00017411562,0.7062778,0.0028121609,0.0054756147,0.27074844],"study_design_scores_gemma":[0.0011634728,0.000053549953,0.7933741,0.0001465309,0.0005027813,0.000017847231,0.00017720538,0.00027293194,0.20019636,0.0026169873,0.0012628549,0.00021536234],"about_ca_topic_score_codex":0.0014291022,"about_ca_topic_score_gemma":0.0000406665,"teacher_disagreement_score":0.7821659,"about_ca_system_score_codex":0.000027109045,"about_ca_system_score_gemma":0.00009258286,"threshold_uncertainty_score":0.77016914},"labels":[],"label_agreement":null},{"id":"W2089433635","doi":"10.1016/j.gene.2014.10.053","title":"Meeting report for “OddPols” 2014: The odds invite an even","year":2014,"lang":"en","type":"article","venue":"Gene","topic":"RNA modifications and cancer","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Center for Research Resources; National Institute of General Medical Sciences; National Institutes of Health; Hebrew University of Jerusalem; Université de Toulouse; University of Melbourne; European Molecular Biology Laboratory; McGill University; Universität Regensburg; University of Alberta; University of Oklahoma; University of Dundee; Université Laval; Foundation for the National Institutes of Health; Academy of Finland; Université de Lausanne; Northwestern University; Purdue University","keywords":"Ninth; Presentation (obstetrics); Library science; Biology; Odds; Medicine; Computer science","score_opus":0.013674609568180696,"score_gpt":0.27692506243555015,"score_spread":0.2632504528673695,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2089433635","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.92917776,0.0010431821,0.06463891,0.0018960641,0.00026312206,0.00026291874,0.000019702276,0.000014841885,0.0026834966],"genre_scores_gemma":[0.99327946,0.00008951707,0.0020932485,0.0007802545,0.0008589,0.00010989228,0.00029140816,0.000017308457,0.0024800084],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.99944633,0.00003154472,0.00012423922,0.0002112755,0.00005586923,0.00013072707],"domain_scores_gemma":[0.99931306,0.0000070859887,0.00006991761,0.000504549,0.00006781613,0.000037549704],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003920604,0.000064494925,0.000056042118,0.00000878111,0.00012529126,0.000019633862,0.00015058689,0.000057391244,0.0000076769675],"category_scores_gemma":[0.00005979634,0.00004709127,0.000049613005,0.000023158593,0.000028967199,0.00000191724,0.000032056163,0.00002627514,0.0000066436396],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00001144175,0.000016861233,0.00030641066,0.000003505555,0.000015811976,2.9394528e-7,0.000024890302,0.00012637868,0.9796335,0.00019081877,0.011850861,0.007819188],"study_design_scores_gemma":[0.00015339424,0.000090007474,0.0014829438,0.000001999192,0.000012327257,0.000019191717,0.000023944034,0.00036478677,0.29020855,0.00023473323,0.7073169,0.00009125578],"about_ca_topic_score_codex":0.000026714599,"about_ca_topic_score_gemma":0.000033645345,"teacher_disagreement_score":0.69546604,"about_ca_system_score_codex":0.0000050770905,"about_ca_system_score_gemma":0.000029147186,"threshold_uncertainty_score":0.19203264},"labels":[],"label_agreement":null},{"id":"W2089654452","doi":"10.1016/j.gene.2007.02.043","title":"Mycobacterial truncated hemoglobins: From genes to functions","year":2007,"lang":"en","type":"review","venue":"Gene","topic":"Hemoglobin structure and function","field":"Biochemistry, Genetics and Molecular Biology","cited_by":51,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"Università degli Studi Roma Tre","keywords":"Biology; Globin; Bacteria; Heme; Gene; In vivo; Reactive nitrogen species; Reactive oxygen species; Microbiology; Genetics; Computational biology; Biochemistry; Enzyme","score_opus":0.035747242041751275,"score_gpt":0.3167605001383411,"score_spread":0.28101325809658984,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2089654452","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0018140391,0.9894468,0.002797322,0.000009915647,0.0036277885,0.0005748432,0.0008977505,0.000047907295,0.000783641],"genre_scores_gemma":[0.00004344009,0.97860706,0.0011395366,0.00028363735,0.0064167897,0.000083557876,0.011359433,0.00008890352,0.0019776653],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9980633,0.00007758667,0.0005080285,0.000788542,0.00016654289,0.00039598395],"domain_scores_gemma":[0.99875665,0.000015601903,0.00015976607,0.00075680466,0.00009350182,0.00021769777],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00012709752,0.00048451405,0.0007770553,0.00012089658,0.00010856136,0.00005129913,0.00030215303,0.00082071684,0.00022571677],"category_scores_gemma":[0.000047206646,0.0004230901,0.0004277004,0.0002955091,0.00003247929,0.0000027425008,0.00018290296,0.00016994997,0.00055644265],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000048222624,0.000020319436,0.0000033337315,0.00021041333,0.00025213903,0.0000064765827,0.000005900275,0.0000016876793,0.028161624,0.0000013468175,0.015122657,0.9561659],"study_design_scores_gemma":[0.00020015087,0.00013391957,0.000013574053,0.00020468961,0.00037886316,0.000041869785,0.000004751536,1.5143766e-7,0.0057910974,0.000005932985,0.9927727,0.00045231727],"about_ca_topic_score_codex":0.00006739931,"about_ca_topic_score_gemma":0.000055141034,"teacher_disagreement_score":0.97765005,"about_ca_system_score_codex":0.000063705134,"about_ca_system_score_gemma":0.00025123783,"threshold_uncertainty_score":0.9998221},"labels":[],"label_agreement":null},{"id":"W2090065783","doi":"10.1016/j.gene.2005.02.001","title":"Protein diversity is generated within the motin family of proteins by alternative pre-mRNA splicing","year":2005,"lang":"en","type":"article","venue":"Gene","topic":"Angiogenesis and VEGF in Cancer","field":"Biochemistry, Genetics and Molecular Biology","cited_by":24,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Centre hospitalier de l'Université Laval; Université Laval","funders":"Family Process Institute","keywords":"Biology; Alternative splicing; RNA splicing; Cell biology; Protein family; Messenger RNA; Genetics; Gene isoform; Gene; RNA","score_opus":0.013268806399027468,"score_gpt":0.23791201055850958,"score_spread":0.2246432041594821,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2090065783","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9938299,0.002059173,0.0029987362,0.00026326583,0.000047656013,0.0004420203,0.00009801711,0.0000072807206,0.00025395784],"genre_scores_gemma":[0.9955346,0.00010216297,0.0015569548,0.00063910976,0.00030053224,0.000039546045,0.00003708242,0.000015803429,0.001774201],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99916524,0.000051443938,0.00018111244,0.00027206814,0.0001636661,0.00016647238],"domain_scores_gemma":[0.9994042,0.0000027190424,0.00015212188,0.0002942456,0.000103275874,0.000043455613],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00017444906,0.00013247579,0.00011917868,0.000015445168,0.00016006819,0.000010591711,0.00027152413,0.0000892084,0.000024788254],"category_scores_gemma":[0.000012941824,0.000097607925,0.00008590744,0.00007770647,0.00007665732,0.0000039249558,0.00026915036,0.000058658625,0.000006142203],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00005671458,0.00004325275,0.0010367146,0.0000071141485,0.00008427342,4.2442488e-7,0.0002883778,0.00047387148,0.9927707,0.00001694553,0.003691173,0.0015304475],"study_design_scores_gemma":[0.000307739,0.00012979259,0.0008435218,0.000010884097,0.000017599414,0.000001568313,0.00004924666,0.00050887576,0.9918058,0.000015730473,0.006186299,0.00012295533],"about_ca_topic_score_codex":0.00035207113,"about_ca_topic_score_gemma":0.00004889223,"teacher_disagreement_score":0.0024951263,"about_ca_system_score_codex":0.000021010608,"about_ca_system_score_gemma":0.000049465205,"threshold_uncertainty_score":0.39803356},"labels":[],"label_agreement":null},{"id":"W2090093818","doi":"10.1016/j.gene.2005.10.003","title":"Tenebrio molitor antifreeze protein gene identification and regulation","year":2005,"lang":"en","type":"article","venue":"Gene","topic":"Insect Utilization and Effects","field":"Agricultural and Biological Sciences","cited_by":23,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Queen's University","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Biology; TATA box; Gene; Coding region; Genetics; Upstream activating sequence; Promoter; Regulatory sequence; genomic DNA; Reporter gene; Transgene; CAAT box; Conserved sequence; Molecular biology; Regulation of gene expression; Gene expression; Peptide sequence","score_opus":0.012426720389528296,"score_gpt":0.2000524896110611,"score_spread":0.1876257692215328,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2090093818","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99829495,0.00014663725,0.00007103656,0.0009308954,0.00005910563,0.00021909454,0.000009492947,0.00005176229,0.00021704719],"genre_scores_gemma":[0.9970058,0.00002073083,0.00037329402,0.00013439619,0.000447127,0.00001549806,0.00010104897,6.1937277e-7,0.0019014654],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99948084,0.000036262016,0.00011423809,0.00016121133,0.000099066136,0.00010839758],"domain_scores_gemma":[0.9998137,0.000011336793,0.000047927173,0.000040213774,0.00004377047,0.000043065524],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014008074,0.000059717986,0.0000563121,0.000008026174,0.00012854383,0.00005024736,0.00005383256,0.00005028726,0.00015380839],"category_scores_gemma":[0.000021438236,0.000025322648,0.000019314492,0.00012619636,0.000019254061,0.00010453145,0.000018247254,0.000025482312,0.000058915848],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000053724502,0.000014564872,0.00042585077,0.00000226796,0.0000015866033,2.0438608e-7,0.000018641067,0.000009484993,0.917836,0.00015468837,0.00025416375,0.081277154],"study_design_scores_gemma":[0.00007327902,0.00003126795,0.2787322,0.000004498213,0.0000033429453,0.0000048228485,0.000006538014,0.0010161577,0.7051546,0.00014546674,0.014748939,0.00007885783],"about_ca_topic_score_codex":0.000040245028,"about_ca_topic_score_gemma":0.00010990867,"teacher_disagreement_score":0.27830637,"about_ca_system_score_codex":0.000011750792,"about_ca_system_score_gemma":0.0000030562644,"threshold_uncertainty_score":0.1684094},"labels":[],"label_agreement":null},{"id":"W2091176739","doi":"10.1016/j.gene.2008.01.017","title":"The multiple roles of CUX1: Insights from mouse models and cell-based assays","year":2008,"lang":"en","type":"review","venue":"Gene","topic":"Cancer-related gene regulation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":144,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University Health Centre; McGill University","funders":"","keywords":"Biology; Transcription factor; Gene isoform; Gene; Cell cycle; Phenotype; Cell biology; Histone; Transcriptional regulation; Gene expression; Genetics; Drosophila melanogaster; Transcription (linguistics)","score_opus":0.019319620665252415,"score_gpt":0.24774002709097126,"score_spread":0.22842040642571884,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2091176739","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0049133566,0.9928567,0.0015027076,0.0000064904916,0.00009799471,0.00036289173,0.00016370675,0.000008537842,0.00008761604],"genre_scores_gemma":[0.0064350506,0.9914712,0.00045845666,0.00001048903,0.00021903183,0.00004525986,0.0010995786,0.000048069236,0.0002129086],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.998864,0.000112945396,0.00035682417,0.00037776088,0.00014007746,0.00014838742],"domain_scores_gemma":[0.9989655,0.00005622908,0.00029514905,0.00056117825,0.00006696099,0.000055008615],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000044085322,0.00025946123,0.0004637962,0.000041778876,0.000100704376,0.0000138576825,0.00019913726,0.00043629567,0.000001731309],"category_scores_gemma":[0.000018464527,0.00018793781,0.00022706532,0.00007178087,0.00009830501,0.0000020415669,0.00008968051,0.000109460176,0.0000028496806],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009174321,0.00011057961,0.0000065598106,0.0012060149,0.00051981607,0.0000037752218,0.00008205296,0.010982609,0.10821774,0.000009952419,0.0031840457,0.87558514],"study_design_scores_gemma":[0.00045691433,0.00006369155,0.0000026875607,0.00028081323,0.00018534584,0.000005716782,0.0000049348014,0.0018906001,0.10894708,0.000047542617,0.88782173,0.00029296448],"about_ca_topic_score_codex":0.00004596063,"about_ca_topic_score_gemma":0.00014663415,"teacher_disagreement_score":0.88463765,"about_ca_system_score_codex":0.00002504864,"about_ca_system_score_gemma":0.00024052855,"threshold_uncertainty_score":0.7663881},"labels":[],"label_agreement":null},{"id":"W2091910695","doi":"10.1016/s0378-1119(02)01074-0","title":"An L1 element disrupts human bone sialoprotein promoter: lack of tissue-specific regulation by distalless5 (Dlx5) and runt homeodomain protein2 (Runx2)/core binding factor a1 (Cbfa1) elements","year":2002,"lang":"en","type":"article","venue":"Gene","topic":"Bone and Dental Protein Studies","field":"Medicine","cited_by":32,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Biology; Promoter; Molecular biology; Bone sialoprotein; Transcription factor; Homeobox; Response element; Transcription (linguistics); Enhancer; DLX5; Gene; EMX2; Genetics; Gene expression; Osteocalcin","score_opus":0.07136089687667505,"score_gpt":0.32252010438948703,"score_spread":0.25115920751281195,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2091910695","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99250656,0.0029301113,0.00032119837,0.00034910452,0.000059743703,0.0032776687,0.0001603044,0.00008021429,0.00031507862],"genre_scores_gemma":[0.9949089,0.00029205403,0.002123225,0.000043005482,0.00018910851,0.00023633424,0.00028203934,0.00005983239,0.0018654837],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99741805,0.000064736574,0.00078514207,0.00060441665,0.000648147,0.0004795344],"domain_scores_gemma":[0.9988102,0.000011326006,0.00034976038,0.0005217897,0.000088328015,0.00021861219],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0002784888,0.0003571347,0.0006193969,0.00014734444,0.00029807325,0.000046536614,0.00011105515,0.00012797285,0.0005128195],"category_scores_gemma":[0.00001608028,0.00031280224,0.000076878474,0.0002165115,0.00017013817,0.00017598103,0.00014249672,0.00017104259,0.000034219633],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015171194,0.0006340456,0.0050696633,0.00029412966,0.00009736531,0.000041387302,0.0010085847,4.735068e-7,0.96324974,0.000084719235,0.0012774125,0.028090788],"study_design_scores_gemma":[0.0070470315,0.0036275862,0.04993984,0.00046310763,0.00013624881,0.00005233208,0.00074095855,0.00015671515,0.9171443,0.00043593964,0.019453041,0.000802875],"about_ca_topic_score_codex":0.00007192107,"about_ca_topic_score_gemma":0.0000354482,"teacher_disagreement_score":0.046105396,"about_ca_system_score_codex":0.00013339991,"about_ca_system_score_gemma":0.000009757607,"threshold_uncertainty_score":0.9999324},"labels":[],"label_agreement":null},{"id":"W2091961258","doi":"10.1016/s0378-1119(99)00467-9","title":"Sak kinase gene structure and transcriptional regulation","year":2000,"lang":"en","type":"article","venue":"Gene","topic":"Renal and related cancers","field":"Biochemistry, Genetics and Molecular Biology","cited_by":20,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Lunenfeld-Tanenbaum Research Institute; Mount Sinai Hospital","funders":"Medical Research Council","keywords":"Biology; Exon; Gene; Molecular biology; Alternative splicing; Transcription (linguistics); Primer extension; Promoter; RNA splicing; Coding region; Genetics; Reporter gene; Complementary DNA; Gene expression; Messenger RNA; RNA","score_opus":0.0033295360249352814,"score_gpt":0.1911511960673032,"score_spread":0.18782166004236792,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2091961258","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9954002,0.003465425,0.00013676057,0.00015084077,0.00007477715,0.000049139726,0.000043191285,0.000005788183,0.0006738629],"genre_scores_gemma":[0.9951123,0.00094086054,0.0005791937,0.00022247169,0.00027411387,0.0000021155079,0.00030010322,0.000007578035,0.0025612705],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9996104,0.0000120709865,0.0000691218,0.00015960488,0.00005786584,0.000090924616],"domain_scores_gemma":[0.9998376,7.168032e-7,0.00001273901,0.00008996769,0.000015031244,0.000043940123],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000019019357,0.000066716886,0.00004678198,0.000011153827,0.00004893808,0.000008289495,0.000035419565,0.00010666159,0.00030135858],"category_scores_gemma":[0.0000012612776,0.000056218887,0.000028303586,0.0000315692,0.00003598942,0.0000017409571,0.0000052196033,0.000038173417,0.000005453024],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000059315214,0.000004799067,0.000074936645,0.0000031671823,0.000021602156,0.0000011054957,0.000019690322,0.00073087175,0.98007137,0.000030827505,0.00065801886,0.018324275],"study_design_scores_gemma":[0.00043700385,0.000072696195,0.012187725,0.000003793373,0.000015274041,0.0000547585,0.0000028539946,0.000063665175,0.9298881,0.00034051057,0.056823384,0.000110189925],"about_ca_topic_score_codex":0.000009159262,"about_ca_topic_score_gemma":0.000005189749,"teacher_disagreement_score":0.056165364,"about_ca_system_score_codex":0.000005328554,"about_ca_system_score_gemma":0.000017781073,"threshold_uncertainty_score":0.32996652},"labels":[],"label_agreement":null},{"id":"W2092320658","doi":"10.1016/s0378-1119(03)00811-4","title":"De novo gene expression and antisense inhibition in cultured cells of BmTRN-1, cloned from the midgut of the silkworm, Bombyx mori, which is homologous with mammalian TIA-1/R","year":2003,"lang":"en","type":"article","venue":"Gene","topic":"Viral Infectious Diseases and Gene Expression in Insects","field":"Biochemistry, Genetics and Molecular Biology","cited_by":7,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Carleton University","funders":"Japan Society for the Promotion of Science; Ministry of Education, Culture, Sports, Science and Technology","keywords":"Biology; Bombyx mori; Midgut; Molecular biology; Gene; Homologous chromosome; Gene expression; Bombycidae; Bombyx; Genetics; Larva; Botany","score_opus":0.0049336242462436975,"score_gpt":0.20739603572342064,"score_spread":0.20246241147717695,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2092320658","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9971359,0.0017232122,0.0003907368,0.000088149776,0.0001049354,0.00024165839,0.00014585353,0.0000042138677,0.00016533301],"genre_scores_gemma":[0.9978455,0.0003341673,0.0012164804,0.00031753944,0.00006688508,0.0000190758,0.000041593543,0.000016438593,0.00014236606],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.998995,0.00017051815,0.00022524367,0.00028244196,0.00013564971,0.000191164],"domain_scores_gemma":[0.9992463,0.000015600615,0.00016317464,0.00042320412,0.00009575124,0.00005599623],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000116632145,0.00015272615,0.00016117349,0.000020654408,0.000094718926,0.0000144217765,0.000076413686,0.00016239364,0.000031501695],"category_scores_gemma":[0.000038302478,0.000089463705,0.00006540388,0.0001528999,0.00011309263,0.000005091878,0.00008418276,0.0000898108,6.727596e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014835317,0.00009887509,0.00874882,0.000015701196,0.0000242415,0.000008462818,0.00025942762,0.00018914242,0.9887708,0.000008365443,0.001676128,0.000051691],"study_design_scores_gemma":[0.00093990006,0.00018103683,0.0077703106,0.000059876023,0.000029405546,0.00005243281,0.000105209285,0.000011562694,0.9900851,0.00019963809,0.00044091768,0.00012457675],"about_ca_topic_score_codex":0.00019194288,"about_ca_topic_score_gemma":0.00014496357,"teacher_disagreement_score":0.0013890448,"about_ca_system_score_codex":0.00001011353,"about_ca_system_score_gemma":0.00007581469,"threshold_uncertainty_score":0.3648224},"labels":[],"label_agreement":null},{"id":"W2092576475","doi":"10.1016/j.gene.2015.02.045","title":"The role dietary of bioactive compounds on the regulation of histone acetylases and deacetylases: A review","year":2015,"lang":"en","type":"review","venue":"Gene","topic":"Histone Deacetylase Inhibitors Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":202,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba","funders":"","keywords":"Epigenetics; Biology; Histone; Epigenomics; Chromatin; Acetylation; Epigenetic regulation of neurogenesis; DNA methylation; Histone code; Cancer epigenetics; Histone deacetylase; Histone Acetyltransferases; Histone methylation; Histone methyltransferase; Cell biology; Genetics; Gene expression; DNA; Gene; Nucleosome","score_opus":0.04815908473616127,"score_gpt":0.37536530625314984,"score_spread":0.3272062215169886,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2092576475","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0015529149,0.99610394,0.0000028438076,0.000120078985,0.00007963287,0.0010448939,0.00018991073,0.0000049183554,0.00090087764],"genre_scores_gemma":[0.0011853258,0.99753726,0.00006091132,0.000038986604,0.00014487462,0.00013471313,0.00034671422,0.000044746896,0.0005064444],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9976663,0.0006428889,0.0006295537,0.00040284,0.00042158802,0.00023685217],"domain_scores_gemma":[0.9977923,0.0002332564,0.0006006492,0.0009890243,0.0003005001,0.000084270054],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0011201608,0.00032285476,0.0009170706,0.000064468484,0.00014058757,0.000010912394,0.00044040446,0.00023157017,0.0000087640865],"category_scores_gemma":[0.00043279555,0.00018187556,0.0003392748,0.00023126566,0.0006012508,0.0000031149048,0.000271453,0.00024322624,0.000009810896],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001741349,0.00017695193,0.0000014605553,0.012585678,0.0006462242,0.000002695695,0.000067034496,0.0000021882677,0.03640997,0.000107569555,0.042267792,0.9075583],"study_design_scores_gemma":[0.0001184983,0.00043173277,0.0000022249073,0.005529577,0.00028953882,0.000041021347,0.00002688219,0.0000023655746,0.029052291,0.000025010806,0.9643042,0.00017664696],"about_ca_topic_score_codex":0.00004261,"about_ca_topic_score_gemma":0.000022428416,"teacher_disagreement_score":0.9220364,"about_ca_system_score_codex":0.000089931695,"about_ca_system_score_gemma":0.00054585806,"threshold_uncertainty_score":0.74166703},"labels":[],"label_agreement":null},{"id":"W2092745539","doi":"10.1016/s0378-1119(99)00564-8","title":"Crossover hot-spot instigator (Chi) sequences in Escherichia coli occupy distinct recombination/transcription islands","year":2000,"lang":"en","type":"article","venue":"Gene","topic":"DNA Repair Mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":19,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Queen's University","funders":"","keywords":"Biology; Deinococcus radiodurans; Genetics; ORFS; Escherichia coli; Methanococcus; Recombination; Thermophile; Open reading frame; DNA; Bacteria; Molecular biology; Gene; Peptide sequence","score_opus":0.010543554796381782,"score_gpt":0.23730425533463975,"score_spread":0.22676070053825798,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2092745539","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99590427,0.0002689217,0.00024756548,0.000076838,0.00031118302,0.00018932122,0.000043620563,0.000029789462,0.002928492],"genre_scores_gemma":[0.99433434,0.00014861568,0.0014741482,0.0003333374,0.0001247584,0.000042647418,0.00024106869,0.000020987822,0.0032800853],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99895895,0.000061670755,0.00022209529,0.0003701659,0.00013702353,0.00025010563],"domain_scores_gemma":[0.99955267,0.000003888152,0.000047999856,0.00026635162,0.000038272283,0.000090824855],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00017336902,0.00015791079,0.00013426301,0.000036879235,0.000073016745,0.000037882637,0.0001750342,0.00016803903,0.0004896224],"category_scores_gemma":[0.000037326143,0.00015872887,0.0000703633,0.00015145453,0.000060224516,0.000009947427,0.000023520632,0.00008896633,0.00005940777],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015146907,0.000073955554,0.0015667,0.000008845201,0.000014629125,0.0000065832455,0.000090695146,0.000035050445,0.9946293,0.000058620717,0.00051684986,0.0028472985],"study_design_scores_gemma":[0.0010895202,0.00022719549,0.011674845,0.00001470884,0.000010735425,0.000009643879,0.000025236523,0.0001818544,0.96500653,0.0005076934,0.020995583,0.00025647614],"about_ca_topic_score_codex":0.000051106897,"about_ca_topic_score_gemma":0.00015435624,"teacher_disagreement_score":0.029622795,"about_ca_system_score_codex":0.000031612522,"about_ca_system_score_gemma":0.00009299571,"threshold_uncertainty_score":0.6472776},"labels":[],"label_agreement":null},{"id":"W2094101270","doi":"10.1016/s0378-1119(01)00873-3","title":"Characterization of a novel gene up-regulated during anoxia exposure in the marine snail, Littorina littorea","year":2002,"lang":"en","type":"article","venue":"Gene","topic":"Physiological and biochemical adaptations","field":"Environmental Science","cited_by":26,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Carleton University","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Biology; Hepatopancreas; Littorina; Snail; Molecular biology; Complementary DNA; Polysome; Gene; cDNA library; Biochemistry; Ribosome; RNA; Mollusca; Ecology","score_opus":0.02015789095625848,"score_gpt":0.19202487978113889,"score_spread":0.1718669888248804,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2094101270","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99915636,0.000012692327,0.000035643192,0.00020504186,0.00003471326,0.00011463937,0.000016406331,0.000013307409,0.00041121326],"genre_scores_gemma":[0.998993,0.00003498285,0.0003168524,0.000077853765,0.0000486673,0.000015339816,0.00005540033,0.000003923722,0.0004539995],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9993448,0.000022642173,0.00017038634,0.00016895896,0.00014756293,0.00014564377],"domain_scores_gemma":[0.9997331,0.00001269713,0.000055305205,0.00016121696,0.00000595461,0.000031729218],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00005411577,0.00007966816,0.00009015456,0.0000132983605,0.000045309476,0.0000071870613,0.00017384127,0.000048744485,0.00089798303],"category_scores_gemma":[0.00001478243,0.000051397714,0.000033140328,0.0002973497,0.000066717075,0.00006680402,0.000113757495,0.00006119138,0.000036278037],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000010024381,0.00019853059,0.004872618,0.000003445784,0.00000252639,0.0000011280301,0.00018938776,0.0000514536,0.99342936,0.000010723319,0.0000115048015,0.0012192825],"study_design_scores_gemma":[0.00019782405,0.000031510895,0.5824384,0.0000026219366,0.0000025720556,0.000003145777,0.0000063117295,0.0004701914,0.41660282,0.00005284954,0.00013716645,0.000054590055],"about_ca_topic_score_codex":0.00006600695,"about_ca_topic_score_gemma":0.000008884051,"teacher_disagreement_score":0.5775658,"about_ca_system_score_codex":0.000028503808,"about_ca_system_score_gemma":0.0000010853346,"threshold_uncertainty_score":0.98322845},"labels":[],"label_agreement":null},{"id":"W2094319747","doi":"10.1016/j.gene.2014.01.015","title":"Two novel mutations in glucocerebrosidase, C23W and IVS7−1 G&gt;A, identified in Type 1 Gaucher patients heterozygous for N370S","year":2014,"lang":"en","type":"article","venue":"Gene","topic":"Lysosomal Storage Disorders Research","field":"Medicine","cited_by":4,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Mount Sinai Hospital; Jacobs (Canada); University of Victoria","funders":"","keywords":"Glucocerebrosidase; Biology; Point mutation; Genetics; Compound heterozygosity; Mutation; Exon; Intron; Molecular biology; Loss of heterozygosity; Phenotype; Gene; Allele","score_opus":0.027814947721691064,"score_gpt":0.316564715159909,"score_spread":0.28874976743821795,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2094319747","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99771476,0.00017839517,0.00058250804,0.00020093269,0.000110406385,0.0007289937,0.000019020436,0.000016477057,0.0004485322],"genre_scores_gemma":[0.99756825,0.000016633976,0.0013340837,0.00026902475,0.00004992529,0.00008154054,0.00014204938,0.000027698572,0.000510801],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99893594,0.00003218583,0.00023733365,0.00027896647,0.0002140192,0.00030152782],"domain_scores_gemma":[0.99943703,0.00008186308,0.00003698039,0.00019760683,0.00014763915,0.00009885428],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00021269776,0.000109979155,0.00020877634,0.00020511457,0.00004109749,0.000024298946,0.00007340463,0.00007088626,0.000051746887],"category_scores_gemma":[0.000442339,0.00010688953,0.00003155294,0.00030117447,0.000047849226,0.00006923605,0.000051866034,0.00011996627,0.000034647554],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0011628189,0.0018620293,0.669598,0.00039190147,0.00007249245,0.00002511449,0.0018943253,0.00015244794,0.28633875,0.00020057589,0.0016742013,0.036627393],"study_design_scores_gemma":[0.02135161,0.00074360106,0.9502294,0.00010975205,0.000038195347,0.000013193004,0.00016716753,0.005964054,0.01825861,0.00060578523,0.0022008491,0.00031778676],"about_ca_topic_score_codex":0.00043021742,"about_ca_topic_score_gemma":0.0014489582,"teacher_disagreement_score":0.28063142,"about_ca_system_score_codex":0.00008749304,"about_ca_system_score_gemma":0.000048394686,"threshold_uncertainty_score":0.43588284},"labels":[],"label_agreement":null},{"id":"W2095088033","doi":"10.1016/j.gene.2012.01.069","title":"Construction and validation of a GFP-based vector for promoter expression analysis in the fish pathogen Flavobacterium psychrophilum","year":2012,"lang":"en","type":"article","venue":"Gene","topic":"Aquaculture disease management and microbiota","field":"Immunology and Microbiology","cited_by":12,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"Ministerio de Ciencia e Innovación","keywords":"Biology; Pathogen; Reporter gene; Gene; Transformation (genetics); Vector (molecular biology); Model organism; Flavobacterium; Genetics; Computational biology; Gene expression; Microbiology; Bacteria; Recombinant DNA","score_opus":0.011125350986623594,"score_gpt":0.23578016437113444,"score_spread":0.22465481338451085,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2095088033","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9970771,0.00029625237,0.0017076343,0.00020762662,0.00013752328,0.0003881227,0.000144037,0.000008786319,0.00003290547],"genre_scores_gemma":[0.99813193,0.0000073372644,0.00057532225,0.000108805056,0.000037762657,0.00004185585,0.0010415296,0.0000042787183,0.000051200226],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9994873,0.000100967,0.00013914162,0.00011934998,0.000016068887,0.0001372055],"domain_scores_gemma":[0.9997187,0.000021915126,0.000086068685,0.00013748488,0.000027668997,0.0000081653],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00018813295,0.00007583785,0.0001257047,0.000087875815,0.00005238164,0.0000072436937,0.00006494145,0.00007789359,0.00007452093],"category_scores_gemma":[0.00001118327,0.000051669,0.00006957453,0.00014692418,0.000058454218,0.000055920053,0.000016988179,0.000038012342,0.000004065853],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000896544,0.00008519695,0.015156619,0.00002712497,0.000099996745,1.1299015e-7,0.00037033812,0.0000021383642,0.98266166,0.00002946494,0.000850036,0.0006276514],"study_design_scores_gemma":[0.0010085878,0.00005940765,0.06522435,0.000012861269,0.0004752186,0.000002370345,0.00021725408,0.0000047223484,0.92483026,0.000019233681,0.008043542,0.000102175785],"about_ca_topic_score_codex":0.000006921353,"about_ca_topic_score_gemma":0.0000051462057,"teacher_disagreement_score":0.05783139,"about_ca_system_score_codex":0.000007455596,"about_ca_system_score_gemma":0.0000056066515,"threshold_uncertainty_score":0.21070006},"labels":[],"label_agreement":null},{"id":"W2095293817","doi":"10.1016/s0378-1119(03)00808-4","title":"Characterization of the mouse lysosomal sialidase promoter","year":2003,"lang":"en","type":"article","venue":"Gene","topic":"Glycosylation and Glycoproteins Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":13,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research","keywords":"Sialidase; Biology; Molecular biology; Gene; Promoter; Gene expression; Regulation of gene expression; Genetics; Biochemistry; Enzyme; Neuraminidase","score_opus":0.01115595805965809,"score_gpt":0.2426602590823145,"score_spread":0.23150430102265643,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2095293817","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99814844,0.000019834464,0.00070583634,0.00008363423,0.000042994172,0.00018644697,0.000014900895,0.00000293223,0.00079499825],"genre_scores_gemma":[0.9956166,0.000009352389,0.0001631511,0.000088565925,0.00004322457,0.000011716124,0.00006389847,0.0000077557825,0.003995749],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.999528,0.00006872993,0.00009187245,0.00011045557,0.00010315332,0.00009778318],"domain_scores_gemma":[0.9996246,9.919696e-7,0.000038342074,0.00024602763,0.000062748324,0.000027251714],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00008942421,0.00004931624,0.00004408511,0.000014357431,0.000039681796,0.000008444227,0.00008859439,0.00005388462,0.00010546438],"category_scores_gemma":[0.00006241164,0.000035305056,0.000041119147,0.000068690446,0.00003146404,0.0000015643384,0.000034584347,0.000031745123,0.000009758255],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00001310135,0.00002805023,0.00094451185,0.0000052832247,0.0000068020763,2.45673e-7,0.000014810282,0.000003870521,0.9984228,0.00008753487,0.00006017399,0.00041280076],"study_design_scores_gemma":[0.00020407149,0.000041076422,0.00262555,0.000001368027,0.000001943452,0.000004120399,0.0000029433468,0.000010095431,0.96908706,0.000011591607,0.027968576,0.000041572268],"about_ca_topic_score_codex":0.0000026949576,"about_ca_topic_score_gemma":0.000004133211,"teacher_disagreement_score":0.029335722,"about_ca_system_score_codex":0.000003676385,"about_ca_system_score_gemma":0.00004349707,"threshold_uncertainty_score":0.14396983},"labels":[],"label_agreement":null},{"id":"W2106412546","doi":"10.1016/j.gene.2009.07.007","title":"The canine kallikrein-related peptidase 14: Structural characterization, alternative splicing and differential expression in mammary cancer","year":2009,"lang":"en","type":"article","venue":"Gene","topic":"Coagulation, Bradykinin, Polyphosphates, and Angioedema","field":"Medicine","cited_by":4,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"St. Michael's Hospital; University of Toronto","funders":"","keywords":"Biology; RNA splicing; Alternative splicing; Exon; Intron; Gene; Proteases; Gene expression; Molecular biology; Genetics; RNA; Biochemistry; Enzyme","score_opus":0.008847440117637141,"score_gpt":0.25831162281910697,"score_spread":0.24946418270146983,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2106412546","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99601716,0.0012710978,0.00024199294,0.0018539865,0.00025092694,0.00025534641,0.000011104796,0.00003574038,0.00006261685],"genre_scores_gemma":[0.9972739,0.00072615145,0.00007874642,0.0002458859,0.000273338,0.00001003319,0.00013630198,0.000012589966,0.0012430107],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99909633,0.00003211239,0.00026309898,0.00022583856,0.00016659852,0.00021602146],"domain_scores_gemma":[0.999551,0.000027441416,0.000105824445,0.00016467417,0.00006175993,0.000089315225],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0000512649,0.00014501966,0.00018865091,0.00006332267,0.00015958557,0.00003902897,0.000071482835,0.00006313094,0.00008145933],"category_scores_gemma":[0.00002134395,0.00009955169,0.00003566951,0.00012496133,0.000037504582,0.000117329015,0.00003456158,0.000115297524,0.0000016315553],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00021070949,0.00003099342,0.056267828,0.000017708502,0.00003973608,0.00004320952,0.0018653652,0.00005028222,0.8788664,0.00035802883,0.000088069384,0.062161695],"study_design_scores_gemma":[0.001521195,0.000064342385,0.9146974,0.00014583462,0.00002650035,0.00003125986,0.000023992152,0.0064089485,0.07644712,0.00036709226,0.00014152438,0.00012476831],"about_ca_topic_score_codex":0.00021124103,"about_ca_topic_score_gemma":0.00008665561,"teacher_disagreement_score":0.8584296,"about_ca_system_score_codex":0.000052341762,"about_ca_system_score_gemma":0.000045180368,"threshold_uncertainty_score":0.40596},"labels":[],"label_agreement":null},{"id":"W2112828663","doi":"10.1016/s0378-1119(01)00427-9","title":"A novel regulatory element in the dnmt1 gene that responds to co-activation by Rb and c-Jun","year":2001,"lang":"en","type":"article","venue":"Gene","topic":"Epigenetics and DNA Methylation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":19,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"National Cancer Institute","keywords":"Biology; DNMT1; Transactivation; Oncogene; Cell biology; Cellular differentiation; Regulation of gene expression; Gene; Molecular biology; Gene expression; Genetics; Cell cycle; DNA methylation","score_opus":0.019894425374995688,"score_gpt":0.27634737772496326,"score_spread":0.25645295234996757,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2112828663","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9879757,0.0010551099,0.009652625,0.00062359823,0.00003776617,0.00021588722,0.000016693033,0.000003864238,0.00041872065],"genre_scores_gemma":[0.9967674,0.00045009583,0.0012513644,0.0007671233,0.00011651595,0.000033570253,0.00017893681,0.000012464086,0.00042253413],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9992649,0.000050807535,0.00013425043,0.00024465338,0.00014273157,0.00016268523],"domain_scores_gemma":[0.99959964,0.000011545304,0.000045293564,0.00026920525,0.00002738479,0.000046961224],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00039095242,0.0000974983,0.00007273131,0.000044454853,0.000058780308,0.000024233403,0.000100711484,0.0000841562,0.0000090250605],"category_scores_gemma":[0.000027483717,0.0000816662,0.000022170552,0.00009756488,0.000020710724,0.0000030355297,0.00004057975,0.000043793396,0.0000026879143],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006874873,0.00003971023,0.0039060554,0.000002081966,0.000007747876,7.2103273e-7,0.00011734073,0.000076660224,0.9897348,0.000013609315,0.0009097265,0.0051227715],"study_design_scores_gemma":[0.00037173808,0.00014454832,0.039312314,0.0000031213326,0.0000039212414,0.0000035024075,0.000058223002,0.000032487813,0.861447,0.000040952298,0.09848042,0.00010180323],"about_ca_topic_score_codex":0.000031820415,"about_ca_topic_score_gemma":0.00003164596,"teacher_disagreement_score":0.12828785,"about_ca_system_score_codex":0.000016390772,"about_ca_system_score_gemma":0.000022125396,"threshold_uncertainty_score":0.3330251},"labels":[],"label_agreement":null},{"id":"W2115803302","doi":"10.1016/j.gene.2007.06.020","title":"Establishment of a tissue-specific RNAi system in C. elegans","year":2007,"lang":"en","type":"article","venue":"Gene","topic":"Genetics, Aging, and Longevity in Model Organisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":226,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"National Institute of Arthritis and Musculoskeletal and Skin Diseases; National Institute of General Medical Sciences","keywords":"Biology; RNA interference; Mutant; Gene knockdown; Gene; Complementary DNA; Caenorhabditis elegans; Molecular biology; Gene expression; Phenotype; Cell biology; Genetics; RNA","score_opus":0.008996239462357648,"score_gpt":0.2290266749205339,"score_spread":0.22003043545817627,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2115803302","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97122663,0.002086051,0.02460616,0.000030267907,0.00027823035,0.0001835758,0.0000113330725,0.00001149962,0.0015662566],"genre_scores_gemma":[0.9953737,0.00019147938,0.0037345535,0.000053812397,0.00021760016,0.000004968546,0.000041512925,0.000021466041,0.00036087367],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99894494,0.000025695617,0.0003102903,0.00027635024,0.00015360648,0.00028909146],"domain_scores_gemma":[0.99938446,0.000005943887,0.00008092846,0.00039146928,0.00006463295,0.00007258674],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003984889,0.00012673491,0.00016401432,0.000075854354,0.000026742377,0.000011956728,0.00019603859,0.0001277064,0.000015145262],"category_scores_gemma":[0.000010565202,0.00013279343,0.000045168577,0.00010863258,0.000045889414,0.0000020144234,0.00007420258,0.00006321043,0.000013319204],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00003195805,0.00006671989,0.002740828,0.000042527456,0.000013584615,0.000014024685,0.00032152128,0.000209147,0.9933716,0.00013929367,0.0005961027,0.0024526997],"study_design_scores_gemma":[0.00040358995,0.00014874063,0.0061115194,0.000014072827,0.0000070458386,0.000019240246,0.00028161434,0.000014991111,0.9615108,0.00001637048,0.03132834,0.00014369698],"about_ca_topic_score_codex":0.000074510455,"about_ca_topic_score_gemma":0.00016425186,"teacher_disagreement_score":0.031860813,"about_ca_system_score_codex":0.000032944365,"about_ca_system_score_gemma":0.00003478033,"threshold_uncertainty_score":0.5415159},"labels":[],"label_agreement":null},{"id":"W2118010018","doi":"10.1016/j.gene.2014.08.039","title":"An investigation of appetite-related peptide transcript expression in Atlantic cod (Gadus morhua) brain following a Camelina sativa meal-supplemented feeding trial","year":2014,"lang":"en","type":"article","venue":"Gene","topic":"Aquaculture Nutrition and Growth","field":"Agricultural and Biological Sciences","cited_by":15,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Memorial University of Newfoundland","funders":"Natural Sciences and Engineering Research Council of Canada; Cotton Research and Development Corporation","keywords":"Biology; Camelina sativa; Gadus; Camelina; Atlantic cod; Appetite; Fish meal; Anchovy; Aquaculture; Ghrelin; Cocaine and amphetamine regulated transcript; Polyunsaturated fatty acid; Endocrinology; Internal medicine; Food science; Neuropeptide; Fishery; Hormone; Biochemistry; Agronomy; Crop; Fatty acid","score_opus":0.016718848750985293,"score_gpt":0.2355719929708279,"score_spread":0.21885314421984262,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2118010018","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9973846,0.000036243033,0.000062662744,0.0018777914,0.00009779225,0.00039032224,0.000017910535,0.00004976682,0.00008290268],"genre_scores_gemma":[0.9985194,0.000008105146,0.0004697713,0.00016343287,0.00017167532,0.000020910418,0.00060112955,0.0000017680063,0.000043794113],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9985889,0.00026240628,0.0004044322,0.00027169462,0.00025354902,0.0002190028],"domain_scores_gemma":[0.9995687,0.000104173836,0.00012930315,0.000053908425,0.000037102942,0.000106806656],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00049449515,0.0001369231,0.0002397842,0.000031834,0.000109123444,0.000027063074,0.00015386622,0.00012817838,0.000104527644],"category_scores_gemma":[0.00007796544,0.00006202886,0.000109465385,0.00037087698,0.00003670144,0.0001535219,0.000016343998,0.00011901018,0.000006544321],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00046190122,0.000066502915,0.0076142214,0.000009417022,0.000006513494,0.0000017501915,0.0006486861,0.000008045087,0.98995996,0.000065861095,0.0004081884,0.0007489562],"study_design_scores_gemma":[0.022063054,0.0018696828,0.11795637,0.0004999431,0.000042561413,0.000006252078,0.001836931,0.0012574045,0.849331,0.002277134,0.00232057,0.00053904747],"about_ca_topic_score_codex":0.00029248607,"about_ca_topic_score_gemma":0.00051111385,"teacher_disagreement_score":0.1406289,"about_ca_system_score_codex":0.000023523835,"about_ca_system_score_gemma":0.0000062728,"threshold_uncertainty_score":0.25294638},"labels":[],"label_agreement":null},{"id":"W2120960164","doi":"10.1016/j.gene.2012.12.024","title":"Leigh syndrome associated with mitochondrial complex I deficiency due to novel mutations In NDUFV1 and NDUFS2","year":2012,"lang":"en","type":"article","venue":"Gene","topic":"Mitochondrial Function and Pathology","field":"Biochemistry, Genetics and Molecular Biology","cited_by":56,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hospital for Sick Children; McMaster Children's Hospital","funders":"","keywords":"Biology; Genetics; Compound heterozygosity; Mutation; Mitochondrial DNA; Frameshift mutation; Mitochondrial disease; Heteroplasmy; Respiratory chain; Mitochondrial respiratory chain; Leigh disease; Gene; Mitochondrion","score_opus":0.024132764481212314,"score_gpt":0.24935244074705426,"score_spread":0.22521967626584194,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2120960164","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.988671,0.00014068293,0.00969584,0.00014791772,0.00041355393,0.0002408784,0.000056106564,0.000012270299,0.0006217441],"genre_scores_gemma":[0.99337953,0.000004944998,0.005222031,0.00043449763,0.0001864156,0.000038782884,0.0002894452,0.00001625837,0.00042811656],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9991556,0.00005060415,0.00015604544,0.0002513093,0.000087480315,0.000298996],"domain_scores_gemma":[0.9995873,0.00001784696,0.000045151548,0.00017075831,0.000046278994,0.0001326669],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000098875695,0.0001229477,0.00015556387,0.000072442795,0.00007239692,0.000013616262,0.000074796255,0.0001341325,0.000071057286],"category_scores_gemma":[0.000117213465,0.00011256277,0.000025816875,0.00017208281,0.000049798808,0.0000052178007,0.00005442801,0.00007093551,0.000031754018],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008215784,0.00016909748,0.004866893,0.0000029960177,0.000014781739,0.000009678762,0.0001541935,0.00007501118,0.9937124,0.00013285622,0.0006523571,0.00012753629],"study_design_scores_gemma":[0.01153528,0.0036721737,0.74024767,0.000060320323,0.00014671263,0.0028216627,0.0004969268,0.0001447267,0.1998083,0.00012124884,0.0392911,0.0016538787],"about_ca_topic_score_codex":0.000030413155,"about_ca_topic_score_gemma":0.00022558145,"teacher_disagreement_score":0.7939041,"about_ca_system_score_codex":0.000016006623,"about_ca_system_score_gemma":0.000037911537,"threshold_uncertainty_score":0.45901766},"labels":[],"label_agreement":null},{"id":"W2121091764","doi":"10.1016/j.gene.2008.06.015","title":"High rates of lateral gene transfer are not due to false diagnosis of gene absence","year":2008,"lang":"en","type":"article","venue":"Gene","topic":"Genomics and Phylogenetic Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":8,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Biology; Gene; Genome; Genetics; Gene prediction; Cutoff; Gene dosage; Human genome; Gene density; Computational biology; Gene expression","score_opus":0.018121242951073785,"score_gpt":0.22841446773536755,"score_spread":0.21029322478429377,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2121091764","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9967596,0.0020228128,0.00038597238,0.00014722448,0.00014765443,0.00018292188,0.00033318097,0.0000024939357,0.000018136103],"genre_scores_gemma":[0.9940458,0.001956714,0.0033575196,0.00027052825,0.00015752146,0.00004679043,0.000037262922,0.000021882159,0.0001060102],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99897265,0.000029281491,0.00031291554,0.0003172816,0.00013821025,0.00022968264],"domain_scores_gemma":[0.99934703,0.000014452007,0.0000633441,0.00034679478,0.00014549814,0.00008287858],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00008157603,0.0001748106,0.0003216255,0.000042589036,0.000060625953,0.0000040115237,0.00023691461,0.00010093375,0.00001913615],"category_scores_gemma":[0.000022838474,0.00016527556,0.00012002379,0.00009304289,0.00009616148,7.254704e-7,0.000090377645,0.00003611751,0.0000062139998],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000871397,0.00008200726,0.04892476,0.000017968065,0.00010179637,0.0000118678245,0.00017486587,0.00047551523,0.94955266,0.000006693008,0.00026057145,0.0003041523],"study_design_scores_gemma":[0.00032775107,0.00021441033,0.22972769,0.0000065938566,0.000016844653,0.000014934414,0.000011737179,0.000001730145,0.76881456,0.000016925827,0.0007057834,0.00014101385],"about_ca_topic_score_codex":0.00012929684,"about_ca_topic_score_gemma":0.00004563222,"teacher_disagreement_score":0.18080294,"about_ca_system_score_codex":0.0000060423895,"about_ca_system_score_gemma":0.00003463168,"threshold_uncertainty_score":0.67397416},"labels":[],"label_agreement":null},{"id":"W2121858345","doi":"10.1016/j.gene.2011.06.014","title":"Transcriptional regulation of antioxidant enzymes by FoxO1 under dehydration stress","year":2011,"lang":"en","type":"article","venue":"Gene","topic":"FOXO transcription factor regulation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":73,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Carleton University","funders":"Natural Sciences and Engineering Research Council of Canada; University of Toronto","keywords":"Biology; FOXO1; Catalase; Superoxide dismutase; Oxidative stress; Transcription factor; Antioxidant; Molecular biology; Gene expression; Biochemistry; Internal medicine; Endocrinology; Gene","score_opus":0.018425931579470384,"score_gpt":0.21411020347766319,"score_spread":0.1956842718981928,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2121858345","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.930656,0.00072570104,0.06768922,0.00004202215,0.00013911768,0.0001353533,0.00010515765,0.000015110362,0.0004922791],"genre_scores_gemma":[0.9968601,0.00005426113,0.0017587965,0.000042464384,0.00006285203,0.000009046989,0.0007917879,0.00001557039,0.00040514697],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99923706,0.000042957217,0.00022800574,0.00021574432,0.00015708551,0.00011916417],"domain_scores_gemma":[0.9995781,0.0000023589398,0.00008846705,0.00019342819,0.00009737606,0.00004025352],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00007972957,0.00010641788,0.00009004185,0.00004303501,0.000041273954,0.000006567296,0.000082459126,0.00012064016,0.00016403524],"category_scores_gemma":[0.000005453693,0.00011061346,0.00007328384,0.0000649939,0.00006387835,0.000012193805,0.000008315953,0.000031568,0.0000052236032],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007993713,0.00008412591,0.0015667513,0.0000117102645,0.000032950586,8.971737e-8,0.000093782764,0.00019709038,0.99533063,0.0016089205,0.00045219442,0.00054182595],"study_design_scores_gemma":[0.00035719998,0.00010817685,0.11790428,0.0000062357362,0.000016825245,0.0000027090134,0.000028643108,0.00009233672,0.87985224,0.00035164115,0.0011744368,0.00010527898],"about_ca_topic_score_codex":0.00002981546,"about_ca_topic_score_gemma":0.00003841426,"teacher_disagreement_score":0.11633753,"about_ca_system_score_codex":0.000011084096,"about_ca_system_score_gemma":0.00002772772,"threshold_uncertainty_score":0.45106858},"labels":[],"label_agreement":null},{"id":"W2122992011","doi":"10.1016/j.gene.2006.10.025","title":"Sequence and expression of four coral G protein-coupled receptors distinct from all classifiable members of the rhodopsin family","year":2006,"lang":"en","type":"article","venue":"Gene","topic":"Photoreceptor and optogenetics research","field":"Neuroscience","cited_by":29,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal","funders":"Australian Research Council; Natural Sciences and Engineering Research Council of Canada","keywords":"Biology; Rhodopsin; G protein-coupled receptor; Subfamily; Evolutionary biology; Rhodopsin-like receptors; Phylum; Genetics; Coral; Phylogenetics; Genome; Receptor; Gene; Ecology; Biochemistry","score_opus":0.0813647653019128,"score_gpt":0.2925826753085264,"score_spread":0.21121791000661358,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2122992011","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9981194,0.00010357161,0.00010709548,0.000041962117,0.00017601656,0.00040986197,0.00011976229,0.000013704402,0.00090863794],"genre_scores_gemma":[0.99791944,0.00003075916,0.0013225162,0.000028772087,0.000041614447,0.000023390365,0.000006885363,0.000016163489,0.00061048253],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99846435,0.00016896364,0.0002656925,0.00033335786,0.00050778204,0.00025988198],"domain_scores_gemma":[0.9992251,0.00013476785,0.00015533372,0.0003597535,0.000057887544,0.00006716892],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00017718886,0.00012605252,0.00018667967,0.00004187024,0.00008949486,0.000022340462,0.00039139768,0.00007186545,0.000111834444],"category_scores_gemma":[0.00018905474,0.00008810017,0.000057996298,0.00023213927,0.0003491308,0.000061185056,0.00021134914,0.00012815169,0.0000038010273],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006668305,0.00004108638,0.0038789033,0.000015782944,0.0000018638129,0.0000017002571,0.000058137004,0.00007236661,0.9953383,0.000022884053,0.0003172771,0.00018497756],"study_design_scores_gemma":[0.00034079133,0.000057630157,0.007257323,0.00004174374,0.0000057545717,0.0000013985222,0.00002066566,0.0018095907,0.98899174,0.00050264114,0.00087535154,0.00009539794],"about_ca_topic_score_codex":0.0014810929,"about_ca_topic_score_gemma":0.000050907678,"teacher_disagreement_score":0.0063466257,"about_ca_system_score_codex":0.000033092423,"about_ca_system_score_gemma":0.00007656111,"threshold_uncertainty_score":0.35926205},"labels":[],"label_agreement":null},{"id":"W2123315750","doi":"10.1016/s0378-1119(99)00516-8","title":"Ermap, a gene coding for a novel erythroid specific adhesion/receptor membrane protein","year":2000,"lang":"en","type":"article","venue":"Gene","topic":"Erythrocyte Function and Pathophysiology","field":"Medicine","cited_by":33,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"National Heart, Lung, and Blood Institute","keywords":"Biology; Molecular biology; Fusion protein; Complementary DNA; Transmembrane protein; Vesicle-associated membrane protein 8; cDNA library; Cell biology; Membrane protein; Gene; Receptor; Biochemistry; Recombinant DNA","score_opus":0.035819945088989766,"score_gpt":0.2586221890719155,"score_spread":0.2228022439829257,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2123315750","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99111754,0.0005879402,0.0030400818,0.0012375702,0.0005172678,0.0014854025,0.00010925457,0.00017555547,0.0017293643],"genre_scores_gemma":[0.8241703,0.001557823,0.10458469,0.005297688,0.0058898167,0.00088081305,0.0011128854,0.0001969458,0.056309033],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99864745,0.000026837453,0.0003200029,0.00043550428,0.0001786964,0.00039148616],"domain_scores_gemma":[0.99922985,0.000046328463,0.000067581925,0.00036952386,0.00010032136,0.00018639618],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.0001500791,0.00021262978,0.000389972,0.00009344232,0.00015261727,0.000013965559,0.00008673653,0.00016177652,0.0065057473],"category_scores_gemma":[0.000032351447,0.00018792905,0.00018285359,0.0001946677,0.000067547226,0.000054237775,0.000019443638,0.00015861374,0.0009587551],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00095398945,0.00020575807,0.000022907076,0.00008833395,0.00004234057,0.00000916689,0.00013467945,0.000013914372,0.9840854,0.00009602369,0.005815217,0.008532303],"study_design_scores_gemma":[0.0034832943,0.0005948546,0.00043522523,0.000061194914,0.000034377877,0.00011930045,0.000043796575,0.00017364201,0.6676866,0.000028798393,0.3271427,0.00019623281],"about_ca_topic_score_codex":0.000008807032,"about_ca_topic_score_gemma":0.0000021846217,"teacher_disagreement_score":0.32132748,"about_ca_system_score_codex":0.00006687375,"about_ca_system_score_gemma":0.000088510074,"threshold_uncertainty_score":0.9998191},"labels":[],"label_agreement":null},{"id":"W2125212638","doi":"10.1016/s0378-1119(00)00280-8","title":"The KLK7 (PRSS6) gene, encoding for the stratum corneum chymotryptic enzyme is a new member of the human kallikrein gene family — genomic characterization, mapping, tissue expression and hormonal regulation","year":2000,"lang":"en","type":"article","venue":"Gene","topic":"Coagulation, Bradykinin, Polyphosphates, and Angioedema","field":"Medicine","cited_by":104,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Mount Sinai Hospital","funders":"","keywords":"Biology; Gene; Gene family; Kallikrein; Complementary DNA; Pair-rule gene; Genetics; Exon; Locus (genetics); Molecular biology; Genomic organization; Structural gene; Coding region; Intron; Gene expression; Regulator gene; Genome; Biochemistry; Enzyme","score_opus":0.02822064279057202,"score_gpt":0.2559173550539935,"score_spread":0.22769671226342147,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2125212638","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9888213,0.0062153647,0.0018657561,0.0014815622,0.00023925392,0.0010459021,0.000046389916,0.000034844765,0.0002496067],"genre_scores_gemma":[0.98498595,0.0011573307,0.00054309185,0.00055810105,0.0008824164,0.000046363526,0.00014562442,0.000043090076,0.011638036],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99851304,0.000050883347,0.00050264446,0.00032865262,0.00030458506,0.0003002148],"domain_scores_gemma":[0.9989122,0.00010047038,0.00026482012,0.0005178209,0.00010574002,0.000098918536],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002658613,0.00022165348,0.00025760502,0.000044379194,0.00068856706,0.00006954184,0.0002146519,0.00012134079,0.00024253962],"category_scores_gemma":[0.00002263456,0.00013071981,0.00012015652,0.00017724963,0.00012829289,0.00010097636,0.000055427543,0.000108426015,0.0000068131817],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006877868,0.000023619601,0.0013321936,0.000025681056,0.00006102514,6.608723e-7,0.0010485045,0.000065860164,0.9802863,0.00017059762,0.0017637333,0.015153075],"study_design_scores_gemma":[0.0010447714,0.00009306479,0.4928256,0.000087190594,0.00014017776,0.000029256,0.00007043656,0.002490238,0.4719255,0.00053067424,0.030598877,0.00016423165],"about_ca_topic_score_codex":0.000078904086,"about_ca_topic_score_gemma":0.000013765502,"teacher_disagreement_score":0.5083608,"about_ca_system_score_codex":0.000046155612,"about_ca_system_score_gemma":0.00013664209,"threshold_uncertainty_score":0.5330599},"labels":[],"label_agreement":null},{"id":"W2128309067","doi":"10.1016/j.gene.2015.09.065","title":"Analysis of the coding potential of the ORF in the control region of the female-transmitted Mytilus mtDNA","year":2015,"lang":"en","type":"letter","venue":"Gene","topic":"Invertebrate Immune Response Mechanisms","field":"Immunology and Microbiology","cited_by":12,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal","funders":"","keywords":"Biology; Mitochondrial DNA; Open reading frame; Genetics; mtDNA control region; Genome; Mytilus; Coding region; Computational biology; Gene; Ecology; Genotype","score_opus":0.01563107031659324,"score_gpt":0.2168597265475509,"score_spread":0.20122865623095765,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2128309067","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8164472,0.0052010906,0.0016630716,0.1690386,0.004053679,0.0025576015,0.0006009487,0.0000243832,0.0004134234],"genre_scores_gemma":[0.9695099,0.0000489151,0.0000056991457,0.028904768,0.00007725927,0.000024751786,0.000061271225,0.000025877274,0.0013415558],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9949723,0.0034342436,0.0007248189,0.00028795787,0.00021192645,0.00036875083],"domain_scores_gemma":[0.9970086,0.00029521814,0.0009229496,0.0015564568,0.0002114201,0.000005310511],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001097637,0.00029281407,0.00085701485,0.00022958165,0.00015830125,0.0000079450165,0.0020085373,0.0008933764,0.00008616018],"category_scores_gemma":[0.00013988242,0.00012622357,0.0008911707,0.0010140556,0.00063681294,0.000022506549,0.00019517836,0.0013062921,0.0000074963928],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00039709438,0.00007366944,0.00047921523,0.00006816244,0.0032488278,0.000014665802,0.0017078333,0.00018011645,0.948851,0.00014245523,0.04454884,0.00028811413],"study_design_scores_gemma":[0.004621887,0.00020242395,0.0144177275,0.00036481905,0.009818218,0.0002502303,0.0008125736,0.000356975,0.9295124,0.0005426799,0.03859814,0.0005019351],"about_ca_topic_score_codex":0.00043518964,"about_ca_topic_score_gemma":0.00009853216,"teacher_disagreement_score":0.15306269,"about_ca_system_score_codex":0.00006102109,"about_ca_system_score_gemma":0.00026342494,"threshold_uncertainty_score":0.6890537},"labels":[],"label_agreement":null},{"id":"W2129453936","doi":"10.1016/j.gene.2005.07.041","title":"Murine implantation serine proteinases 1 and 2: Structure, function and evolution","year":2005,"lang":"en","type":"article","venue":"Gene","topic":"Reproductive System and Pregnancy","field":"Immunology and Microbiology","cited_by":14,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"Biology; Embryo; Tryptase; Gene; Cell biology; Serine; Function (biology); Genetics; Molecular biology; Mast cell; Immunology; Phosphorylation","score_opus":0.006142870797270535,"score_gpt":0.20317890100206984,"score_spread":0.19703603020479932,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2129453936","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97787505,0.020835819,0.00051875407,0.00012168495,0.00022634174,0.00023753861,0.000025608791,0.0000329732,0.00012620447],"genre_scores_gemma":[0.998652,0.00006720364,0.000264202,0.000017425391,0.00011549298,0.000012807742,0.000074949436,0.0000049984283,0.0007909219],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99954885,0.00005074131,0.00009646891,0.00019385439,0.000012337593,0.00009773325],"domain_scores_gemma":[0.99981207,0.000008039637,0.00004352879,0.000098853576,0.00002851817,0.000009001948],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000057664198,0.00007216239,0.00008575531,0.00003840055,0.00009204436,0.000006459256,0.0000179558,0.000065179316,0.00008685265],"category_scores_gemma":[0.000011595265,0.000060341008,0.000008745669,0.00003582083,0.000040368912,0.000095873635,0.000021137354,0.0000476758,0.000027388309],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000064801934,0.000010054986,0.019612202,0.000028425813,0.000030287818,3.6960873e-7,0.00006831621,0.00000483074,0.9555573,0.0006213665,0.00011336038,0.023888707],"study_design_scores_gemma":[0.0007560029,0.00016573569,0.6450986,0.000018854345,0.000025157582,0.00041087638,0.00003486031,0.0000011728936,0.34807202,0.0013057184,0.0040132483,0.000097729084],"about_ca_topic_score_codex":0.000050808438,"about_ca_topic_score_gemma":0.0000437743,"teacher_disagreement_score":0.62548643,"about_ca_system_score_codex":0.000011893579,"about_ca_system_score_gemma":0.000008249463,"threshold_uncertainty_score":0.24606349},"labels":[],"label_agreement":null},{"id":"W2129497779","doi":"10.1016/j.gene.2008.12.011","title":"The ATTCT repeats of spinocerebellar ataxia type 10 display strong nucleosome assembly which is enhanced by repeat interruptions","year":2008,"lang":"en","type":"article","venue":"Gene","topic":"Genetic Neurodegenerative Diseases","field":"Neuroscience","cited_by":17,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Hospital for Sick Children","funders":"National Cancer Institute","keywords":"Spinocerebellar ataxia; Nucleosome; Biology; Trinucleotide repeat expansion; Genetics; Histone; Direct repeat; DNA; Genome instability; Repeated sequence; Transcription (linguistics); Tandem repeat; Genome; Gene; DNA damage; Allele; Base sequence","score_opus":0.03956214524355094,"score_gpt":0.2874350953078621,"score_spread":0.24787295006431115,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2129497779","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99651545,0.00038343412,0.00032249372,0.0003296124,0.0003854383,0.0002707658,0.000158854,0.000052305128,0.0015816484],"genre_scores_gemma":[0.9913611,0.0006720537,0.00013019626,0.00032583482,0.00007477137,0.000020375393,0.000016821623,0.00003898635,0.007359882],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9979138,0.00020366005,0.0003898667,0.0006483887,0.0004487132,0.00039558834],"domain_scores_gemma":[0.9983292,0.00014878565,0.0001979168,0.000950268,0.00023437789,0.0001394246],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009412544,0.00022796127,0.00021862202,0.000049252627,0.00049423904,0.000041913972,0.0005467618,0.0000592261,0.00023511847],"category_scores_gemma":[0.000697183,0.00018013862,0.000104103245,0.0004796326,0.0002337237,0.00010509912,0.00019076925,0.00013980054,0.00024587184],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000052760242,0.00008293167,0.00040229454,0.0000070900255,0.000010698932,0.0000044314925,0.00019495228,0.00007981495,0.9857782,0.00004857508,0.012987478,0.0003507669],"study_design_scores_gemma":[0.00025098663,0.00019862482,0.003879526,0.000011456445,0.000020939955,0.00001596406,0.000029485282,0.00015999554,0.9906845,0.000020423995,0.004552833,0.00017526762],"about_ca_topic_score_codex":0.000013155135,"about_ca_topic_score_gemma":0.000018319306,"teacher_disagreement_score":0.008434645,"about_ca_system_score_codex":0.000033295924,"about_ca_system_score_gemma":0.00010849407,"threshold_uncertainty_score":0.734584},"labels":[],"label_agreement":null},{"id":"W2132895592","doi":"10.1016/j.gene.2009.09.008","title":"Identification of LATS transcriptional targets in HeLa cells using whole human genome oligonucleotide microarray","year":2009,"lang":"en","type":"article","venue":"Gene","topic":"Hippo pathway signaling and YAP/TAZ","field":"Biochemistry, Genetics and Molecular Biology","cited_by":44,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Queen's University","funders":"Canadian Institutes of Health Research","keywords":"Biology; Wnt signaling pathway; Hippo signaling pathway; Cancer research; Cell growth; Signal transduction; CYR61; Cell biology; Cell; Cell cycle; Genetics; CTGF; Growth factor","score_opus":0.013333967254082736,"score_gpt":0.2483684708804225,"score_spread":0.23503450362633976,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2132895592","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9959729,0.0010262893,0.002648386,0.000035816473,0.00007320764,0.00009595821,0.00005780523,0.0000065356035,0.00008312007],"genre_scores_gemma":[0.9981867,0.000029154193,0.001101167,0.000089155204,0.00012426656,0.0000020709203,0.00018904248,0.000011648652,0.000266792],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99916047,0.000040154722,0.00029266856,0.00024197894,0.000091305694,0.00017344028],"domain_scores_gemma":[0.99962324,0.0000016577392,0.00008411448,0.0001980707,0.000050413288,0.000042527554],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00019646616,0.000100752506,0.00011877352,0.0000664554,0.000058357895,0.000011187618,0.00012238791,0.000101073645,0.000013980825],"category_scores_gemma":[0.000004966572,0.00011304594,0.000071851755,0.00007906588,0.000035386318,0.000003726099,0.000010165634,0.0000555951,0.000009782532],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000015494206,0.00007865129,0.00006713057,0.000008905093,0.000009751135,0.000002301563,0.00013717807,0.0018035788,0.9976869,0.000016032382,0.000009500746,0.00016454728],"study_design_scores_gemma":[0.00029104282,0.00007699033,0.006557041,0.000008735205,0.000009047629,0.0000043523346,0.00001941929,0.00007451322,0.9914572,0.00013018605,0.0012516363,0.00011981204],"about_ca_topic_score_codex":0.000015222954,"about_ca_topic_score_gemma":0.000010274882,"teacher_disagreement_score":0.00648991,"about_ca_system_score_codex":0.000014975175,"about_ca_system_score_gemma":0.00003463873,"threshold_uncertainty_score":0.460988},"labels":[],"label_agreement":null},{"id":"W2134285782","doi":"10.1016/j.gene.2013.04.072","title":"Identification, expression, and taxonomic distribution of alternative oxidases in non-angiosperm plants","year":2013,"lang":"en","type":"article","venue":"Gene","topic":"Photosynthetic Processes and Mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":27,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Western University; Wilfrid Laurier University","funders":"Wilfrid Laurier University","keywords":"Biology; Alternative oxidase; Botany; Physcomitrella patens; Gene; Green algae; Phylogenetics; Algae; Evolutionary biology; Biochemistry","score_opus":0.005929452858119301,"score_gpt":0.21763194032694724,"score_spread":0.21170248746882794,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2134285782","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99080336,0.00017554928,0.008701896,0.00002165385,0.000043809086,0.00014744325,0.00006788365,0.000001936232,0.000036444],"genre_scores_gemma":[0.9992893,0.00025892904,0.00012238634,0.000021716618,0.000029335948,0.000049818238,0.00013582905,0.000004755274,0.00008795126],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99956954,0.000009888066,0.00013368441,0.00015794185,0.00004003721,0.00008889621],"domain_scores_gemma":[0.9997301,0.000003954486,0.000068959394,0.00012616777,0.000039384428,0.000031422518],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00005320318,0.000059649614,0.00007227269,0.000016180613,0.000017882636,0.000010672608,0.000074709875,0.00004517369,0.000010989231],"category_scores_gemma":[0.00002507721,0.000054328502,0.000016381182,0.000022086268,0.000025941968,0.0000065343706,0.000049520837,0.00001865452,0.0000040544755],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000009335666,0.00002627058,0.00031037614,0.000008207324,0.000005120014,2.8428835e-7,0.000023353283,0.000008288723,0.99887943,0.000020447136,0.00014592243,0.0005629561],"study_design_scores_gemma":[0.00021576573,0.000033416512,0.0065601133,0.000015268823,0.000002418335,0.0000042877336,0.00005463993,0.00009141293,0.9923362,0.0003840748,0.00024127298,0.00006113343],"about_ca_topic_score_codex":0.00006237028,"about_ca_topic_score_gemma":0.000008676586,"teacher_disagreement_score":0.00857951,"about_ca_system_score_codex":0.0000053927743,"about_ca_system_score_gemma":0.000014051055,"threshold_uncertainty_score":0.2215452},"labels":[],"label_agreement":null},{"id":"W2134460976","doi":"10.1016/s0378-1119(01)00693-x","title":"Identification and characterization of a silkgland-related matrix association region in Bombyx mori","year":2001,"lang":"en","type":"article","venue":"Gene","topic":"Silk-based biomaterials and applications","field":"Materials Science","cited_by":14,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Institute of Genetics","keywords":"Biology; Bombyx mori; Nuclear matrix; DNA; Genetics; Molecular biology; Consensus sequence; Bombyx; Scaffold/matrix attachment region; Oligonucleotide; Gene; Histone; Chromatin; Base sequence","score_opus":0.010329615948272447,"score_gpt":0.24331820051532332,"score_spread":0.23298858456705088,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2134460976","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99859416,0.0000363064,0.0005005882,0.0004184935,0.00015378615,0.00020593994,0.000028082299,0.000034657085,0.000027989574],"genre_scores_gemma":[0.99925226,0.00013321494,0.00008506909,0.000018626726,0.00004571488,0.000032862306,0.00010973103,0.0000070034184,0.00031550624],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99920565,0.00005261489,0.0003329574,0.00017613042,0.0001182808,0.00011438777],"domain_scores_gemma":[0.9994694,0.000019100191,0.0002888916,0.0001394004,0.000058935493,0.000024255432],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00033960064,0.00006388557,0.00011662657,0.00007405408,0.000045167002,0.000040848485,0.00006463484,0.00008276541,0.00007490507],"category_scores_gemma":[0.000027512571,0.00006282852,0.00001508551,0.00023084966,0.000018070014,0.00013277437,0.000017622999,0.000020016998,0.00003849351],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000015916952,0.00003792254,0.013829651,0.0000095804835,0.0000019112288,9.035238e-7,0.00011028976,0.000005959064,0.985429,0.00018082844,0.000027473687,0.0003505637],"study_design_scores_gemma":[0.00029817363,0.000013101083,0.23048222,0.000012170193,0.000009123168,0.0000062439867,0.000013808879,0.00023963588,0.76838195,0.00032731247,0.00015343048,0.00006280937],"about_ca_topic_score_codex":0.00007657732,"about_ca_topic_score_gemma":0.000013314056,"teacher_disagreement_score":0.21704704,"about_ca_system_score_codex":0.000055763914,"about_ca_system_score_gemma":0.000014606347,"threshold_uncertainty_score":0.2562073},"labels":[],"label_agreement":null},{"id":"W2137067202","doi":"10.1016/j.gene.2004.07.042","title":"Identification and expression of a mouse muscle-specific CTL1 gene","year":2004,"lang":"en","type":"article","venue":"Gene","topic":"Mitochondrial Function and Pathology","field":"Biochemistry, Genetics and Molecular Biology","cited_by":42,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"Natural Sciences and Engineering Research Council of Canada; Government of Ontario; University of Guelph","keywords":"Biology; Molecular biology; Complementary DNA; Skeletal muscle; Open reading frame; Gene; Gene expression; Messenger RNA; Transmembrane protein; cDNA library; Biochemistry; Peptide sequence; Endocrinology; Receptor","score_opus":0.012999206468426469,"score_gpt":0.2300923058712603,"score_spread":0.21709309940283383,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2137067202","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9750314,0.00089471054,0.023573862,0.00005650652,0.00022533933,0.00009217735,0.000017572425,0.000007267009,0.000101192556],"genre_scores_gemma":[0.9941413,0.0007357694,0.0038109485,0.00008056154,0.000207,0.000011826141,0.00011696713,0.00001095953,0.0008846736],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99947464,0.00002472826,0.0001456217,0.00021410466,0.000055726843,0.00008515431],"domain_scores_gemma":[0.99960893,0.0000023260611,0.00006189552,0.0002422133,0.000043981316,0.00004063745],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00006893957,0.000065977736,0.00007312556,0.000029409914,0.000037417318,0.0000067758556,0.00005807722,0.00009873735,0.000024408688],"category_scores_gemma":[0.000017871078,0.00006313978,0.000031374475,0.00003777225,0.000042373173,0.0000020961734,0.00004091499,0.000030018078,0.000012982226],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00004198481,0.000028034006,0.000056256053,0.000004957475,0.0000032707176,9.311326e-7,0.000045490615,0.00006262463,0.99835557,0.00005609274,0.0004835522,0.00086122117],"study_design_scores_gemma":[0.0004887989,0.00008052927,0.00072574225,0.000002819464,0.0000038124026,0.00001317532,0.000020035835,0.0000011774378,0.98623246,0.000084167244,0.012281999,0.00006525464],"about_ca_topic_score_codex":0.000004113884,"about_ca_topic_score_gemma":0.0000037618856,"teacher_disagreement_score":0.019762913,"about_ca_system_score_codex":0.0000045216107,"about_ca_system_score_gemma":0.000015961632,"threshold_uncertainty_score":0.25747654},"labels":[],"label_agreement":null},{"id":"W2139518425","doi":"10.1016/j.gene.2012.06.089","title":"Improvement of drought and salt tolerance in Arabidopsis and Lotus corniculatus by overexpression of a novel DREB transcription factor from Populus euphratica","year":2012,"lang":"en","type":"article","venue":"Gene","topic":"Plant Stress Responses and Tolerance","field":"Agricultural and Biological Sciences","cited_by":72,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Biotechnology Research Institute","funders":"","keywords":"Populus euphratica; Biology; Arabidopsis; Lotus corniculatus; Botany; Brassinosteroid; Transcription factor; Gibberellic acid; Gene; Biochemistry; Mutant","score_opus":0.01690371038920142,"score_gpt":0.21533108798742354,"score_spread":0.19842737759822213,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2139518425","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99546784,0.0031279228,0.000024872748,0.0000693807,0.000041665684,0.00012638372,0.0011228231,0.000004995021,0.000014091596],"genre_scores_gemma":[0.99909,0.00055193435,0.00020019179,0.000037249018,0.0000352085,0.000005460732,0.000055696506,6.8653867e-7,0.000023534167],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9993423,0.00001955683,0.00021314276,0.00015004454,0.00011509286,0.00015985302],"domain_scores_gemma":[0.9997325,0.00005753367,0.00009654971,0.000036476984,0.0000139353715,0.0000630082],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00004513917,0.000090044196,0.00018419085,0.000007246306,0.000028347074,0.000007822179,0.00005127281,0.00006182726,0.000037954633],"category_scores_gemma":[0.000008549164,0.00003925219,0.000025432113,0.00007009705,0.00003456557,0.000096425254,0.000022074231,0.000044088454,2.8304402e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015196283,0.00012949698,0.017724585,0.000010926926,0.0000050241756,1.8922121e-7,0.00014314953,0.0000026684133,0.9562299,0.000006854527,0.000020060274,0.02557514],"study_design_scores_gemma":[0.00042602944,0.00010910285,0.5556055,0.00007211333,0.000005605816,0.0000013713636,0.000039078237,0.00034155045,0.44278863,0.000018775763,0.0005058562,0.00008641271],"about_ca_topic_score_codex":0.0010488292,"about_ca_topic_score_gemma":0.00015031084,"teacher_disagreement_score":0.5378809,"about_ca_system_score_codex":0.00000718915,"about_ca_system_score_gemma":0.00000218473,"threshold_uncertainty_score":0.16006579},"labels":[],"label_agreement":null},{"id":"W2139946595","doi":"10.1016/j.gene.2006.12.030","title":"The complete nuclear estrogen receptor family in the rainbow trout: Discovery of the novel ERα2 and both ERβ isoforms","year":2007,"lang":"en","type":"article","venue":"Gene","topic":"Estrogen and related hormone effects","field":"Biochemistry, Genetics and Molecular Biology","cited_by":162,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institut National de la Recherche Scientifique","funders":"National Institute of Environmental Health Sciences; National Institutes of Health; Institut National de la Recherche Agronomique; National Science Foundation","keywords":"Biology; Rainbow trout; Gene isoform; Estrogen receptor; Trout; Gene; Genetics; Peptide sequence; Gene duplication; Phylogenetic tree; Amino acid; Estrogen; Molecular biology; Fishery; Fish <Actinopterygii>","score_opus":0.007281447608394841,"score_gpt":0.21325488314790644,"score_spread":0.2059734355395116,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2139946595","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99596626,0.0025143689,0.00015076304,0.00045340348,0.000134357,0.0002641891,0.000034136578,0.000003771651,0.0004787252],"genre_scores_gemma":[0.9984848,0.00045732243,0.0002387047,0.00044174667,0.00011022726,0.0000051916554,0.000025111294,0.00001763932,0.00021926661],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99916625,0.000054480326,0.00019508999,0.00017983065,0.00014106926,0.00026329167],"domain_scores_gemma":[0.99943656,0.00004435491,0.00009002212,0.00038046602,0.000017793433,0.000030826235],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00053312915,0.0001251021,0.0001070596,0.000015156948,0.00018543178,0.000034070024,0.00034480644,0.00012234857,8.838301e-7],"category_scores_gemma":[0.00003555852,0.000057091056,0.000099376404,0.0001092214,0.00018820912,0.0000045823563,0.00013833742,0.00015908426,0.000002801712],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012203643,0.000039981627,0.0009681911,0.000005036505,0.000048670794,0.0000010123654,0.00019717135,0.000011096065,0.9958155,0.00068518135,0.0007806481,0.001325457],"study_design_scores_gemma":[0.003377903,0.0009974284,0.08325596,0.000058785237,0.00010083887,0.00013215553,0.0027762419,0.00017526608,0.7666666,0.00039161323,0.14151691,0.0005502877],"about_ca_topic_score_codex":0.000054796797,"about_ca_topic_score_gemma":0.000022116516,"teacher_disagreement_score":0.22914891,"about_ca_system_score_codex":0.000011740645,"about_ca_system_score_gemma":0.00003480827,"threshold_uncertainty_score":0.23281057},"labels":[],"label_agreement":null},{"id":"W2142512095","doi":"10.1016/j.gene.2008.10.017","title":"Screening and cloning of antimicrobial DNA sequences using a vital staining method","year":2008,"lang":"en","type":"article","venue":"Gene","topic":"Antimicrobial Peptides and Activities","field":"Immunology and Microbiology","cited_by":13,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Ottawa","funders":"","keywords":"Biology; Complementary DNA; Gene; DNA; Molecular biology; Escherichia coli; Cloning (programming); Molecular cloning; Coding region; Antimicrobial; Genetics; Microbiology","score_opus":0.03758745876386526,"score_gpt":0.27270668554924254,"score_spread":0.23511922678537728,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2142512095","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97771364,0.0007756858,0.02104429,0.000034718243,0.00014932311,0.00007380154,0.000036772075,0.000031148702,0.00014063707],"genre_scores_gemma":[0.9402679,0.000075222575,0.05929206,0.00007831067,0.000042404987,8.028407e-7,0.000019025449,0.000013962291,0.00021027203],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99913615,0.00009885179,0.00022997608,0.00022511696,0.000023765453,0.00028611615],"domain_scores_gemma":[0.99960995,0.0000862858,0.00014580534,0.000104623236,0.000037725218,0.000015621326],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00019242457,0.0001402419,0.00030071297,0.00009386881,0.00033835694,0.0000100791085,0.00008966024,0.0001235903,0.000051994157],"category_scores_gemma":[0.000024434368,0.00013411358,0.000071234586,0.00009147757,0.00036346915,0.00014611833,0.00011415653,0.0001470436,0.0000036545323],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000054553107,0.00001656782,0.0020457013,0.000015968773,0.000088653906,0.000014177453,0.001021956,0.00017365944,0.9944081,0.000058050457,0.0001233323,0.0019793084],"study_design_scores_gemma":[0.0005237839,0.00005850082,0.00060850807,0.000062975094,0.000033433833,0.00095246057,0.0005941718,0.00006213944,0.9965027,0.000017248818,0.0004162494,0.00016785135],"about_ca_topic_score_codex":0.00044639176,"about_ca_topic_score_gemma":0.0000055183345,"teacher_disagreement_score":0.038247768,"about_ca_system_score_codex":0.0000109999455,"about_ca_system_score_gemma":0.000054888525,"threshold_uncertainty_score":0.5468993},"labels":[],"label_agreement":null},{"id":"W2143564231","doi":"10.1016/j.gene.2014.04.005","title":"A novel murine CTP:phosphoethanolamine cytidylyltransferase splice variant is a post-translational repressor and an indicator that both cytidylyltransferase domains are required for activity","year":2014,"lang":"en","type":"article","venue":"Gene","topic":"Biochemical and Molecular Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":14,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"U.S. Public Health Service","keywords":"Biology; Alternative splicing; Gene isoform; Biochemistry; C2 domain; RNA splicing; Cell biology; Molecular biology; Gene; RNA","score_opus":0.018483534706252976,"score_gpt":0.27797785037294787,"score_spread":0.2594943156666949,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2143564231","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.88113135,0.0004655516,0.1149596,0.0014799145,0.000051680057,0.0006993674,0.0011152626,0.000029503914,0.00006779236],"genre_scores_gemma":[0.99087405,0.0001925984,0.006183393,0.0012676264,0.00032483414,0.00017266363,0.0007683546,0.00006661893,0.00014987061],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9977737,0.0000808994,0.0002454189,0.0010216652,0.00032866042,0.0005496788],"domain_scores_gemma":[0.99867284,0.000044858647,0.00007563636,0.0006811473,0.00013321206,0.0003922973],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00041907348,0.00034066013,0.0003172298,0.000076108154,0.00020096518,0.000048015827,0.00030793465,0.0003540248,0.000036607587],"category_scores_gemma":[0.000089080386,0.00032213706,0.00017650529,0.000108860084,0.00019794193,0.000019742842,0.000086667016,0.00018940527,0.0000032471096],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0013445907,0.0004093656,0.00037318657,0.000115531126,0.00011279253,0.000008203722,0.000109686494,0.000004229453,0.99441445,0.00009606267,0.000117751006,0.0028941794],"study_design_scores_gemma":[0.0035243894,0.0007084194,0.005735776,0.00001923566,0.00006653358,0.000088224886,0.00002066948,0.00037414438,0.98322076,0.00009689482,0.0057154885,0.00042946215],"about_ca_topic_score_codex":0.00013307852,"about_ca_topic_score_gemma":0.00011435755,"teacher_disagreement_score":0.109742716,"about_ca_system_score_codex":0.000015866444,"about_ca_system_score_gemma":0.00011642296,"threshold_uncertainty_score":0.99992305},"labels":[],"label_agreement":null},{"id":"W2144457415","doi":"10.1016/j.gene.2004.11.019","title":"Mutation and selection on the anticodon of tRNA genes in vertebrate mitochondrial genomes","year":2004,"lang":"en","type":"article","venue":"Gene","topic":"RNA and protein synthesis mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":78,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Ottawa","funders":"University of Ottawa","keywords":"Biology; Genetics; Transfer RNA; Codon usage bias; Start codon; Mitochondrial DNA; Stop codon; Gene; Synonymous substitution; Wobble base pair; Genetic code; Genome; Nucleotide; RNA","score_opus":0.009596044333039547,"score_gpt":0.21792059782693143,"score_spread":0.2083245534938919,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2144457415","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9972096,0.0007612486,0.0015397187,0.00018582567,0.000071142094,0.00014972698,0.0000027764897,0.000002693601,0.000077251076],"genre_scores_gemma":[0.998289,0.00035416908,0.0011207857,0.00007553308,0.000094115225,0.000014136141,0.000007266589,0.0000071953377,0.00003780625],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9995967,0.000040543746,0.00009609875,0.00013093566,0.00005590591,0.00007979209],"domain_scores_gemma":[0.9998439,0.000006773722,0.000041271436,0.00007563084,0.000018173105,0.000014228136],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00008212711,0.00006077137,0.0000643305,0.000026725904,0.000033629112,0.0000075823873,0.000047176014,0.00006125033,0.0000067638794],"category_scores_gemma":[0.00002170374,0.000045565183,0.000022018037,0.000051040533,0.00002043206,0.0000017775882,0.000013229724,0.000023772816,0.0000025253134],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000067911395,0.000018484785,0.00015955542,0.0000043021078,0.00000974842,9.503844e-7,0.000045415945,0.00027172331,0.9907822,0.0002771879,0.000006320892,0.008356178],"study_design_scores_gemma":[0.00035850742,0.00023042294,0.0006647663,0.000007486274,0.000005135316,0.000007971928,0.00002293899,0.000039239814,0.9973066,0.0010727824,0.00023069902,0.000053471027],"about_ca_topic_score_codex":0.00002322508,"about_ca_topic_score_gemma":0.00003632264,"teacher_disagreement_score":0.008302707,"about_ca_system_score_codex":0.000006256699,"about_ca_system_score_gemma":0.00002657256,"threshold_uncertainty_score":0.18580942},"labels":[],"label_agreement":null},{"id":"W2147075715","doi":"10.1016/s0378-1119(02)00432-8","title":"Genomic organization of the siglec gene locus on chromosome 19q13.4 and cloning of two new siglec pseudogenes","year":2002,"lang":"en","type":"article","venue":"Gene","topic":"Glycosylation and Glycoproteins Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":31,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Mount Sinai Hospital","funders":"","keywords":"Biology; Pseudogene; SIGLEC; Genetics; Locus (genetics); Gene; Genomic organization; Exon; Immunoglobulin superfamily; Gene family; Tandem exon duplication; Genome; Sialic acid","score_opus":0.015218518154338537,"score_gpt":0.23863557165986382,"score_spread":0.2234170535055253,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2147075715","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9969461,0.0017588066,0.0005683718,0.00017152281,0.00005517365,0.00021945464,0.000014157824,0.0000050908475,0.00026129905],"genre_scores_gemma":[0.99735874,0.00041118872,0.00053325505,0.000087252694,0.00014976064,0.0000033064402,0.000028090733,0.000021735757,0.0014066852],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99920714,0.000051383493,0.00019645586,0.00022103857,0.00016741572,0.00015659591],"domain_scores_gemma":[0.99937207,0.000008977229,0.00010197577,0.0003376754,0.000115318646,0.000063982814],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00007834328,0.00010662112,0.00012470814,0.000046754052,0.00007093312,0.000011165796,0.0001746671,0.00008294462,0.00015735935],"category_scores_gemma":[0.000079729245,0.000085745596,0.000043919135,0.00021029971,0.000071905546,0.0000027687781,0.00012601273,0.000056558594,0.000011371163],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000021792473,0.000033630553,0.003944756,0.000013052946,0.000027759414,7.2165045e-7,0.00006872289,0.0006117179,0.9918619,0.00003425997,0.00034088825,0.0030408418],"study_design_scores_gemma":[0.0008290807,0.00016030481,0.0032286677,0.00000942719,0.000010736588,0.000014584926,0.000006853685,0.00017113128,0.9937772,0.000020671325,0.0016817964,0.000089539135],"about_ca_topic_score_codex":0.00006919631,"about_ca_topic_score_gemma":0.000020879868,"teacher_disagreement_score":0.0029513026,"about_ca_system_score_codex":0.000011707285,"about_ca_system_score_gemma":0.000056669025,"threshold_uncertainty_score":0.3496604},"labels":[],"label_agreement":null},{"id":"W2150397055","doi":"10.1016/s0378-1119(01)00336-5","title":"Monitoring promoter activity and protein localization in Mycobacterium spp. using green fluorescent protein","year":2001,"lang":"en","type":"article","venue":"Gene","topic":"Bacteriophages and microbial interactions","field":"Environmental Science","cited_by":54,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"Green fluorescent protein; Biology; Mycobacterium smegmatis; Fusion protein; Subcellular localization; Plasmid; Shuttle vector; Secretory protein; Secretion; Mycobacterium tuberculosis; Recombinant DNA; Protein subcellular localization prediction; Molecular biology; Gene; Vector (molecular biology); Biochemistry; Tuberculosis","score_opus":0.017065836126394257,"score_gpt":0.24300167149329543,"score_spread":0.22593583536690118,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2150397055","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99761313,0.000013968583,0.00151544,0.00012117655,0.00007652561,0.0005284075,0.0000026351122,0.000019559822,0.00010916633],"genre_scores_gemma":[0.9977657,0.000010215768,0.0016461049,0.000016286174,0.0000809784,0.000027757855,0.0000018027633,0.000012926107,0.00043818145],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99931955,0.000038429705,0.00011852099,0.0002310931,0.00008672915,0.00020564925],"domain_scores_gemma":[0.9997645,0.000001894394,0.00004940278,0.00012360237,0.0000054595544,0.000055111497],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00008188553,0.00010274535,0.00008708827,0.000029504381,0.0000820764,0.000046127774,0.00006345456,0.000054094413,0.00028751927],"category_scores_gemma":[0.0000051489887,0.00010077301,0.000018167717,0.0001426865,0.000041508378,0.00031188826,0.00012771394,0.000095513606,0.000045472294],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000025311218,0.000059539718,0.012199548,0.000009195142,0.000002267737,0.000011672256,0.000096898315,0.00009568838,0.9763246,1.9753128e-7,0.0000030446622,0.011172003],"study_design_scores_gemma":[0.00019796893,0.000034541452,0.21129663,0.00007713039,0.0000043160567,0.00002719772,0.000013293716,0.0020859402,0.78476536,0.00001577672,0.001346959,0.00013488042],"about_ca_topic_score_codex":0.0037236866,"about_ca_topic_score_gemma":0.0003405873,"teacher_disagreement_score":0.19909708,"about_ca_system_score_codex":0.00018625145,"about_ca_system_score_gemma":0.000006033246,"threshold_uncertainty_score":0.5629125},"labels":[],"label_agreement":null},{"id":"W2152578425","doi":"10.1016/j.gene.2013.03.128","title":"Allele frequency distribution of CYP2C9*2 and CYP2C9*3 polymorphisms in six Mexican populations","year":2013,"lang":"en","type":"article","venue":"Gene","topic":"Pharmacogenetics and Drug Metabolism","field":"Pharmacology, Toxicology and Pharmaceutics","cited_by":26,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Instituto Mexicano del Seguro Social; Consejo Nacional de Ciencia y Tecnología","keywords":"Biology; CYP2C9; Allele; Allele frequency; Genetics; Polymorphism (computer science); Population; Genetic variation; Genotype; Demography; Gene","score_opus":0.09817265785402347,"score_gpt":0.4000857656625544,"score_spread":0.3019131078085309,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2152578425","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9930064,0.0034229462,0.00024143676,0.0009169899,0.0004559623,0.00036952365,0.00021652458,0.000027408234,0.001342818],"genre_scores_gemma":[0.9971472,0.000723704,0.001055103,0.00047508848,0.0001435982,0.00006616258,0.00020681483,0.000015561132,0.00016676875],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99867594,0.00020463155,0.00040106758,0.0002460041,0.00012365234,0.00034872832],"domain_scores_gemma":[0.999358,0.000061833794,0.00012328649,0.00016644396,0.00008547502,0.00020494788],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0003243135,0.0001650727,0.0002513913,0.00009694581,0.000106855405,0.000011490584,0.00015754299,0.00018493085,0.0009772881],"category_scores_gemma":[0.00004271794,0.00016433328,0.000056063724,0.00023376392,0.00015135088,0.00010147001,0.00007503544,0.0002835864,0.00006131029],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000038503975,0.00032018946,0.12743583,0.000017346745,0.00006702464,0.000009223929,0.00041021392,0.0004056591,0.8320053,0.007818908,0.0023234934,0.029148303],"study_design_scores_gemma":[0.0025251037,0.00008403554,0.6432438,0.000008815488,0.00015495824,0.000023472036,0.00006443613,0.0046014744,0.31353724,0.01360042,0.021731028,0.00042523613],"about_ca_topic_score_codex":0.0006674594,"about_ca_topic_score_gemma":0.000078719946,"teacher_disagreement_score":0.5184681,"about_ca_system_score_codex":0.000030693784,"about_ca_system_score_gemma":0.00004582328,"threshold_uncertainty_score":0.9999359},"labels":[],"label_agreement":null},{"id":"W2152613326","doi":"10.1016/j.gene.2012.02.021","title":"Expression of candidate genes related to metabolism, immunity and cellular stress during massive mortality in the American oyster Crassostrea virginica larvae in relation to biochemical and physiological parameters","year":2012,"lang":"en","type":"article","venue":"Gene","topic":"Invertebrate Immune Response Mechanisms","field":"Immunology and Microbiology","cited_by":25,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université du Québec à Rimouski","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Biology; Crassostrea; Oyster; Gene; Gene expression; Ostreidae; Oxidative stress; Genetics; Cell biology; Ecology; Shellfish; Aquatic animal; Biochemistry","score_opus":0.017326775476524024,"score_gpt":0.2548630710755258,"score_spread":0.23753629559900177,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2152613326","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.997788,0.0015905886,0.00002157441,0.00010712953,0.000085604195,0.00034945522,0.000042283526,0.000011196028,0.00000414088],"genre_scores_gemma":[0.99943316,0.000104520725,0.0002534741,0.0000800183,0.000005546062,0.000041635896,0.000060309543,0.000009702849,0.000011648277],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9980329,0.0009797504,0.0003664313,0.00024189631,0.000045903802,0.00033307666],"domain_scores_gemma":[0.9993659,0.00013063806,0.00014719475,0.0002980485,0.000021096985,0.000037118592],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005383602,0.00016043444,0.00037342295,0.00013907155,0.0000685914,0.000007786191,0.00015576197,0.0001554077,0.000014582048],"category_scores_gemma":[0.00011566514,0.00011459731,0.00003640281,0.00024115921,0.00015581408,0.00007311903,0.00017664017,0.000261626,0.000010555376],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00035009737,0.00008948923,0.029046824,0.000010113062,0.000028938182,0.0000037242637,0.001738494,0.000033041393,0.9685055,0.000017029954,0.0000073794454,0.00016934887],"study_design_scores_gemma":[0.00035128676,0.000049581315,0.42207748,0.000023692568,0.000014715149,0.0000052110195,0.0004456565,0.000004252972,0.57692057,0.000019994171,0.000008681798,0.0000789011],"about_ca_topic_score_codex":0.00062336324,"about_ca_topic_score_gemma":0.000023417077,"teacher_disagreement_score":0.39303067,"about_ca_system_score_codex":0.000026325637,"about_ca_system_score_gemma":0.000012146946,"threshold_uncertainty_score":0.46731427},"labels":[],"label_agreement":null},{"id":"W2156876913","doi":"10.1016/j.gene.2003.10.005","title":"Genomic organization and differential splicing of the mouse and human Pcyt2 genes","year":2003,"lang":"en","type":"article","venue":"Gene","topic":"RNA Research and Splicing","field":"Biochemistry, Genetics and Molecular Biology","cited_by":40,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"Canadian Institutes of Health Research","keywords":"Biology; Promoter; Exon; Gene; Intron; RNA splicing; Alternative splicing; Genetics; Molecular biology; Genomic organization; Exon shuffling; CAAT box; Reporter gene; Gene expression; RNA; Genome","score_opus":0.00729023634672232,"score_gpt":0.22728966848501303,"score_spread":0.2199994321382907,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2156876913","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9990905,0.00039233614,0.00035507925,0.000017614782,0.00001566946,0.00006955578,0.0000029868631,0.00000195375,0.00005434083],"genre_scores_gemma":[0.9987951,0.0002562225,0.00009837516,0.000020971942,0.000038681246,0.0000011034709,0.000011113964,0.000009283201,0.00076914224],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.999647,0.000030301184,0.000069349626,0.00011656075,0.000045845485,0.00009090605],"domain_scores_gemma":[0.99977833,0.0000021519584,0.000026244967,0.0001333135,0.00002930578,0.000030627492],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000049003174,0.000049933013,0.000053333773,0.000012678827,0.000094551455,0.000012187776,0.000050523482,0.0000381522,0.0000089415835],"category_scores_gemma":[0.000023431483,0.0000371761,0.000011972929,0.0000345535,0.00004476842,0.0000011015703,0.0000723364,0.000025233323,3.0774808e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000028148347,0.0000064066094,0.035464026,0.000007967405,0.000010453891,1.405098e-7,0.000017156299,0.000006563378,0.9641108,0.00011436656,0.000024994424,0.00023431498],"study_design_scores_gemma":[0.00021339823,0.000035568995,0.025155023,0.0000015370614,0.000005653017,0.00000876895,0.000016029711,0.000011015191,0.9742285,0.000014627536,0.00026724805,0.00004264156],"about_ca_topic_score_codex":0.00002140115,"about_ca_topic_score_gemma":0.000018226088,"teacher_disagreement_score":0.010309001,"about_ca_system_score_codex":0.0000031986583,"about_ca_system_score_gemma":0.000015267096,"threshold_uncertainty_score":0.15159975},"labels":[],"label_agreement":null},{"id":"W2158232757","doi":"10.1016/s0378-1119(02)00504-8","title":"Cloning, physical mapping and structural characterization of the human α A -adaptin gene","year":2002,"lang":"en","type":"article","venue":"Gene","topic":"Cellular transport and secretion","field":"Biochemistry, Genetics and Molecular Biology","cited_by":9,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Mount Sinai Hospital","funders":"","keywords":"Biology; Exon; Molecular biology; Gene; Alternative splicing; Tensin; HSPA9; HSPA2; Peptide sequence; Genetics; Signal transduction","score_opus":0.011755057088301091,"score_gpt":0.20291928868180298,"score_spread":0.19116423159350188,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2158232757","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99855214,0.00013737187,0.001082051,0.000038099824,0.00004269351,0.00006681001,0.0000094009665,0.0000033571073,0.00006808016],"genre_scores_gemma":[0.9989863,0.00003558423,0.00006788889,0.000030627685,0.00016668237,0.0000020624386,0.00044761787,0.000006641633,0.00025660853],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99965847,0.000013958625,0.00008104734,0.00011680176,0.000055528013,0.00007421284],"domain_scores_gemma":[0.9997916,6.5333967e-7,0.000047540998,0.00012464968,0.000017720255,0.000017834884],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000024060293,0.000058167945,0.00006054495,0.0000094184625,0.000062970204,0.000005594342,0.000054340886,0.00004161153,0.000016722393],"category_scores_gemma":[0.0000020935188,0.000045577843,0.000040234812,0.00003392627,0.00003980582,0.0000016661854,0.00002353203,0.000031102572,5.592689e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000025078903,0.0000072305143,0.0037014622,0.0000064725214,0.000009168109,2.8655668e-7,0.00018048123,0.000004171373,0.9955739,0.000020854979,0.0000018796427,0.0004915992],"study_design_scores_gemma":[0.00016369497,0.00003096221,0.08119579,0.0000042421443,0.00000899079,0.0000051960837,0.0000070613446,0.0006790751,0.9164536,0.000018238388,0.0013740748,0.00005910411],"about_ca_topic_score_codex":0.0000053262447,"about_ca_topic_score_gemma":0.0000036536558,"teacher_disagreement_score":0.079120316,"about_ca_system_score_codex":0.0000021811359,"about_ca_system_score_gemma":0.0000028477973,"threshold_uncertainty_score":0.18586105},"labels":[],"label_agreement":null},{"id":"W2159784568","doi":"10.1016/j.gene.2005.12.030","title":"In vivo expression of the antimicrobial defensin and lactoferrin proteins allowed by the strategic insertion of introns adequately spliced","year":2006,"lang":"en","type":"article","venue":"Gene","topic":"Antimicrobial Peptides and Activities","field":"Immunology and Microbiology","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Sherbrooke; Agriculture and Agri-Food Canada","funders":"Agriculture and Agri-Food Canada","keywords":"Biology; Gene; Multiple cloning site; Cloning (programming); Shuttle vector; Molecular biology; Intron; RNA splicing; Gene expression; Defensin; Expression vector; Genetics; Vector (molecular biology); Recombinant DNA; RNA","score_opus":0.010433195027893765,"score_gpt":0.2031568784515791,"score_spread":0.19272368342368532,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2159784568","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99852777,0.00032205053,0.000033549408,0.0003993948,0.000104892475,0.00029373768,0.00006840954,0.0000074109025,0.00024279371],"genre_scores_gemma":[0.99898,0.00003073699,0.000062388506,0.00007533181,0.000017157305,0.0000056680597,0.00001674935,0.000008393468,0.0008035985],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9992692,0.00014205163,0.00025178166,0.00014260829,0.000024390221,0.00017000231],"domain_scores_gemma":[0.9995911,0.000038148435,0.00016640958,0.00017428258,0.000025198193,0.000004855008],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00011045443,0.000110228226,0.00018747248,0.000034026398,0.00009636654,0.00000702484,0.0001330332,0.00013140352,0.00006469133],"category_scores_gemma":[0.000006653334,0.00006581148,0.00005327064,0.000086085965,0.0002947767,0.00005976444,0.0000823893,0.00015253542,0.0000031069985],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013095356,0.00010119012,0.0004979459,0.000016701117,0.000011447582,3.1919595e-7,0.00012229597,0.000030821433,0.99566454,0.00030406303,0.003073422,0.000046327517],"study_design_scores_gemma":[0.0006729805,0.000050332183,0.003275135,0.00005126827,0.000013381274,0.000012178915,0.00015886567,0.0000035113167,0.99503237,0.00019393335,0.00046249398,0.00007357457],"about_ca_topic_score_codex":0.0019658096,"about_ca_topic_score_gemma":0.0004531106,"teacher_disagreement_score":0.0027771892,"about_ca_system_score_codex":0.000011479498,"about_ca_system_score_gemma":0.000032874195,"threshold_uncertainty_score":0.2971729},"labels":[],"label_agreement":null},{"id":"W2169882791","doi":"10.1016/j.gene.2004.12.011","title":"Site interdependence attributed to tertiary structure in amino acid sequence evolution","year":2005,"lang":"en","type":"article","venue":"Gene","topic":"Genomics and Phylogenetic Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":104,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Canadian Institute for Advanced Research; Université de Montréal","funders":"Université de Montréal; Canada Research Chairs; Génome Québec","keywords":"Biology; Pairwise comparison; Phylogenetic tree; Sequence (biology); Threading (protein sequence); Context (archaeology); Multiple sequence alignment; Alignment-free sequence analysis; Tree (set theory); Computational biology; Sequence alignment; Phylogenetics; Set (abstract data type); Molecular evolution; Protein tertiary structure; Evolutionary biology; Peptide sequence; Computer science; Genetics; Protein structure; Mathematics; Artificial intelligence; Combinatorics; Paleontology; Gene","score_opus":0.009726490430959822,"score_gpt":0.23896323073487816,"score_spread":0.22923674030391833,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2169882791","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99588805,0.0015987358,0.0017246591,0.00037797765,0.00010603579,0.00014153428,0.00011115972,0.0000037752852,0.000048070808],"genre_scores_gemma":[0.99510926,0.0000812017,0.0037915418,0.00061748584,0.0001944533,0.000012691668,0.00006336237,0.000010673233,0.000119346296],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.999195,0.000026643473,0.00015541662,0.00031547633,0.00007400756,0.00023348138],"domain_scores_gemma":[0.9996041,0.0000028858717,0.000031848107,0.00025234936,0.000048003287,0.000060809616],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000072041636,0.0001246903,0.000103747494,0.000043981243,0.000040986863,0.000011032379,0.00016146604,0.000091749505,0.000014675878],"category_scores_gemma":[0.000029008726,0.00012324634,0.00003393285,0.00009001212,0.000026299738,0.000001100117,0.00018523508,0.000061020924,0.000025713429],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00001908882,0.000011564963,0.023931233,0.0000030370045,0.000012932358,0.0000021298488,0.00009808708,0.0009469446,0.9704303,0.00000680531,0.0003332508,0.0042046118],"study_design_scores_gemma":[0.00024304233,0.000074941076,0.1658881,0.0000067018705,0.0000058562036,0.000018388055,0.000021791537,0.00011522564,0.8245242,0.000067040884,0.008863403,0.00017124997],"about_ca_topic_score_codex":0.00004451797,"about_ca_topic_score_gemma":0.0008932672,"teacher_disagreement_score":0.14590606,"about_ca_system_score_codex":0.00004631245,"about_ca_system_score_gemma":0.000031981872,"threshold_uncertainty_score":0.502584},"labels":[],"label_agreement":null},{"id":"W2170958904","doi":"10.1016/j.gene.2011.04.012","title":"Evidence of intra-segmental homologous recombination in influenza A virus","year":2011,"lang":"en","type":"article","venue":"Gene","topic":"Influenza Virus Research Studies","field":"Medicine","cited_by":17,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Mount Sinai Hospital; University of Toronto","funders":"Natural Sciences and Engineering Research Council of Canada; University of Hong Kong","keywords":"Biology; Reassortment; Recombinant DNA; Homologous recombination; Recombination; Genome; Genetics; Virology; Gene; Homologous chromosome; Influenza A virus; Virus; Coronavirus disease 2019 (COVID-19)","score_opus":0.22739701753417652,"score_gpt":0.39326740330841803,"score_spread":0.1658703857742415,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2170958904","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9932748,0.003801382,0.000024510695,0.000057582314,0.00006768404,0.00034331414,0.0000041982325,0.000020864763,0.0024056332],"genre_scores_gemma":[0.99684423,0.00072255835,0.0019036888,0.00036379308,0.000023837783,0.000046823352,0.0000014668905,0.000009650854,0.000083925086],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9990248,0.000056747154,0.0002824468,0.00016636893,0.00024383678,0.00022577874],"domain_scores_gemma":[0.9994816,0.000059462636,0.00006526051,0.0002152744,0.00012391232,0.000054462842],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003910944,0.00008748966,0.00021658058,0.00020294901,0.000026546375,0.0000026803618,0.000094419804,0.000058354126,0.00025758147],"category_scores_gemma":[0.00050404255,0.00007764219,0.000041037376,0.0002504956,0.00012459942,0.00010524761,0.00009306158,0.00014730504,0.00007874707],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.001923764,0.0006845843,0.17040269,0.00027705866,0.00011997268,0.00019440864,0.0073058982,0.000004611199,0.77843904,0.0001834712,0.00060654164,0.03985798],"study_design_scores_gemma":[0.0014136647,0.000848467,0.3283956,0.00026900994,0.000021192362,0.000031897154,0.00018737579,0.000027664695,0.66818416,0.000405591,0.0001231292,0.000092250666],"about_ca_topic_score_codex":0.0006967688,"about_ca_topic_score_gemma":0.00010056438,"teacher_disagreement_score":0.15799293,"about_ca_system_score_codex":0.0001338744,"about_ca_system_score_gemma":0.00007944952,"threshold_uncertainty_score":0.31661567},"labels":[],"label_agreement":null},{"id":"W2194944322","doi":"10.1016/j.gene.2015.12.009","title":"Ethnically distinct populations of historical Tibet exhibit distinct autosomal STR compositions","year":2015,"lang":"en","type":"article","venue":"Gene","topic":"Forensic and Genetic Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"","keywords":"Biology; Locus (genetics); Loss of heterozygosity; Population; Genetics; Allele frequency; Allele; Evolutionary biology; Demography; Gene","score_opus":0.06685861309292006,"score_gpt":0.3255497882142393,"score_spread":0.25869117512131923,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2194944322","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.980918,0.0007838424,0.012275818,0.00062659103,0.0002587717,0.00015848104,0.00009931371,0.000016086924,0.004863095],"genre_scores_gemma":[0.99046916,0.000009266558,0.0064989417,0.00003616115,0.00026038027,0.000012955672,0.0005307313,0.000015781243,0.002166607],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9989122,0.000074272895,0.0002686086,0.0002600487,0.00025713857,0.00022770205],"domain_scores_gemma":[0.99912417,0.000012461322,0.00006695305,0.00039133447,0.00019544426,0.00020964937],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00017578117,0.000113532195,0.0001592572,0.000034105095,0.00006921088,0.000009616449,0.00018712212,0.00011834028,0.00003823702],"category_scores_gemma":[0.00015209636,0.00010490989,0.000093560986,0.0001078515,0.00013048736,0.0000021163587,0.00015581393,0.000089683155,0.00002223049],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003328123,0.00060215313,0.046094842,0.000038650134,0.00011716992,0.000020623513,0.00015100543,0.0006821881,0.82541966,0.0014228178,0.11668872,0.00842933],"study_design_scores_gemma":[0.004221238,0.0039496906,0.4351912,0.00004936647,0.00018569155,0.00017733988,0.00012320171,0.001695623,0.3662121,0.0043548085,0.18262914,0.0012105942],"about_ca_topic_score_codex":0.00014750709,"about_ca_topic_score_gemma":0.00014356384,"teacher_disagreement_score":0.4592076,"about_ca_system_score_codex":0.00005693443,"about_ca_system_score_gemma":0.00016034569,"threshold_uncertainty_score":0.4278101},"labels":[],"label_agreement":null},{"id":"W2210891377","doi":"10.1016/j.gene.2015.11.016","title":"Integrative transcriptomics and proteomics analysis of longissimus dorsi muscles of Canadian double-muscled Large White pigs","year":2015,"lang":"en","type":"article","venue":"Gene","topic":"Muscle Physiology and Disorders","field":"Biochemistry, Genetics and Molecular Biology","cited_by":10,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"Program for Changjiang Scholars and Innovative Research Team in University; National Key Research and Development Program of China","keywords":"Biology; Proteomics; Transcriptome; Muscle hypertrophy; Myostatin; Phenotype; Microarray; Gene; Internal medicine; Genetics; Endocrinology; Bioinformatics; Gene expression","score_opus":0.018242234416871443,"score_gpt":0.24525684925746888,"score_spread":0.22701461484059743,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2210891377","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99673957,0.00064928574,0.0010416639,0.00009598841,0.000048411333,0.00018438205,0.00024620714,0.0000034006284,0.0009910981],"genre_scores_gemma":[0.9981848,0.000199677,0.0010226828,0.00009935094,0.000022748854,0.000011468741,0.00037333486,0.000010019332,0.000075929565],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9992314,0.00004504122,0.00021467009,0.00023935353,0.00006596913,0.00020355298],"domain_scores_gemma":[0.9993128,0.000004908676,0.00009785103,0.0002554911,0.00015731146,0.00017164613],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00017424997,0.00013057371,0.0002842313,0.00031880673,0.00003414198,0.0000047348826,0.0001326705,0.00016333126,0.000018604002],"category_scores_gemma":[0.000029031464,0.00011796376,0.00011539328,0.0004316209,0.00012223214,0.000004388206,0.000032303986,0.000060823357,4.5888265e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0009932041,0.00012492588,0.035336293,0.00003695179,0.0012090242,0.000001978912,0.0020259696,0.0010728958,0.9575422,0.00047241896,0.00062867004,0.0005554679],"study_design_scores_gemma":[0.006722173,0.0010440652,0.11835103,0.000029184519,0.001321725,0.000003923194,0.0040877773,0.0022044296,0.8592962,0.00060728454,0.005619041,0.0007131649],"about_ca_topic_score_codex":0.007862115,"about_ca_topic_score_gemma":0.11409573,"teacher_disagreement_score":0.10623362,"about_ca_system_score_codex":0.000010535047,"about_ca_system_score_gemma":0.0002057338,"threshold_uncertainty_score":0.9987446},"labels":[],"label_agreement":null},{"id":"W2218127159","doi":"10.1016/j.gene.2015.12.039","title":"Microarray-based gene expression profiling reveals genes and pathways involved in the oncogenic function of REG3A on pancreatic cancer cells","year":2015,"lang":"en","type":"article","venue":"Gene","topic":"Pancreatic and Hepatic Oncology Research","field":"Medicine","cited_by":27,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Natural Science Foundation of China; Public Health Agency of Canada","keywords":"Biology; Microarray analysis techniques; Gene expression profiling; Angiogenesis; Signal transduction; Molecular biology; Pancreatic cancer; Microarray; Gene expression; KEGG; Gene; Cancer research; Cell biology; Genetics; Transcriptome; Cancer","score_opus":0.08450706810507057,"score_gpt":0.32762947226700734,"score_spread":0.24312240416193676,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2218127159","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9934725,0.004647195,0.00028272512,0.00032756344,0.00009303616,0.00080944085,0.00001861207,0.0000151470695,0.00033375385],"genre_scores_gemma":[0.9928767,0.0005839874,0.005443175,0.00051240384,0.00017088359,0.00017839516,0.00003748688,0.000017924318,0.00017900697],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9985084,0.00027123315,0.00033179676,0.00027148015,0.00035725028,0.00025986708],"domain_scores_gemma":[0.99903727,0.00020280632,0.00012562725,0.00036709371,0.00013969465,0.00012748412],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010541811,0.00014252952,0.00043604037,0.0001260982,0.00005472056,0.000007635248,0.000097817836,0.00013542455,0.00003534239],"category_scores_gemma":[0.000118665535,0.00009098616,0.000049915543,0.00018734756,0.00008903714,0.000028777707,0.000029704954,0.00018243336,0.000012656308],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00087744306,0.00014611585,0.11620403,0.00012860139,0.00002984765,0.000020731446,0.00046766212,0.000035469307,0.8804373,0.000010569894,0.00053059444,0.001111619],"study_design_scores_gemma":[0.002996849,0.0009756914,0.02388053,0.00027464103,0.00017116083,0.000007602652,0.00064532773,0.00057733274,0.9700106,0.00017875603,0.00017924861,0.00010225389],"about_ca_topic_score_codex":0.0001591283,"about_ca_topic_score_gemma":0.000024142864,"teacher_disagreement_score":0.0923235,"about_ca_system_score_codex":0.00011575438,"about_ca_system_score_gemma":0.00046451215,"threshold_uncertainty_score":0.3710308},"labels":[],"label_agreement":null},{"id":"W2222690725","doi":"10.1016/j.gene.2016.01.003","title":"The early history of Pallister–Hall syndrome—Buried treasure of a sort","year":2016,"lang":"en","type":"article","venue":"Gene","topic":"Hedgehog Signaling Pathway Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":15,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia; BC Children's Hospital","funders":"","keywords":"Imperforate anus; Biology; Polydactyly; GLI3; Genetics; Phenotype; Gene","score_opus":0.01887796630341756,"score_gpt":0.21302179422705642,"score_spread":0.19414382792363885,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2222690725","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9918816,0.0062499796,0.0002559472,0.00012465095,0.00017950746,0.00008302291,0.000028207109,0.0000055983373,0.0011914971],"genre_scores_gemma":[0.9940183,0.00024666626,0.000109887544,0.000025508009,0.000063819985,0.000012292825,0.000004343456,0.00001354504,0.005505613],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99930793,0.00004641333,0.00020729298,0.00016787165,0.00011912153,0.00015134677],"domain_scores_gemma":[0.99933946,0.000025713416,0.00011633038,0.00037669297,0.00010882593,0.00003296576],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00019541192,0.00009364626,0.00014710859,0.00001658849,0.00002702898,0.0000015604681,0.00018468221,0.00007408845,0.000009326292],"category_scores_gemma":[0.00008875254,0.000054479355,0.00009471166,0.000025565534,0.00020426254,0.0000010980629,0.00007359953,0.000024077588,0.0000049010937],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000050387713,0.00002366777,0.0023770758,0.000012831386,0.000101799626,0.0000031647492,0.000119840835,7.4991016e-7,0.9931705,0.00002499392,0.0018929034,0.0022221077],"study_design_scores_gemma":[0.0005280105,0.00041897444,0.015891306,0.000032844982,0.000032446576,0.000012751802,0.00002579237,4.9543155e-7,0.89371425,0.00006608297,0.0891479,0.00012911747],"about_ca_topic_score_codex":0.00002868774,"about_ca_topic_score_gemma":0.000027034277,"teacher_disagreement_score":0.099456206,"about_ca_system_score_codex":0.000025456126,"about_ca_system_score_gemma":0.00010666391,"threshold_uncertainty_score":0.22216035},"labels":[],"label_agreement":null},{"id":"W2227999806","doi":"10.1016/j.gene.2015.12.061","title":"Epithelial sodium channel (ENaC) family: Phylogeny, structure–function, tissue distribution, and associated inherited diseases","year":2016,"lang":"en","type":"review","venue":"Gene","topic":"Ion Transport and Channel Regulation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":406,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institute of General Medical Sciences; Canadian Institutes of Health Research; National Institutes of Health","keywords":"Epithelial sodium channel; Biology; Vertebrate; Reabsorption; Cilium; Salt gland; Cell biology; Gene; Genetics; Evolutionary biology; Kidney; Endocrinology; Sodium; Secretion","score_opus":0.012351138974499075,"score_gpt":0.2493508451793627,"score_spread":0.23699970620486363,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2227999806","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0025494902,0.98392713,0.0038120719,0.000021663156,0.00079559686,0.0004850515,0.008355232,0.000040422234,0.00001336327],"genre_scores_gemma":[0.01431003,0.94669294,0.000010538859,0.000048482623,0.0014463271,0.00005961689,0.03656991,0.00006858304,0.00079358],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9983236,0.000105516905,0.0004304258,0.00061122986,0.0001829651,0.000346255],"domain_scores_gemma":[0.9990421,0.000010475858,0.00028688821,0.00033593766,0.0001728698,0.00015171523],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00008125157,0.000458406,0.00068206986,0.00005843923,0.00016660518,0.00003328421,0.00016515986,0.0006715016,0.000038147908],"category_scores_gemma":[0.000039947015,0.00035368185,0.00022518427,0.00015466592,0.0001085035,0.000005293182,0.000065942746,0.00012268269,0.000015327973],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00019306323,0.00016115901,0.000044348766,0.003538403,0.0014844174,0.000020453683,0.00002955972,0.0000068511035,0.10067459,0.000061297185,0.010020795,0.88376504],"study_design_scores_gemma":[0.00048550204,0.00015545239,0.0008347401,0.0005741734,0.00056739984,0.000013666973,0.000004076868,0.0000017159628,0.00384078,0.0002008664,0.9928025,0.00051913474],"about_ca_topic_score_codex":0.000008149521,"about_ca_topic_score_gemma":0.000011877934,"teacher_disagreement_score":0.9827817,"about_ca_system_score_codex":0.00004542392,"about_ca_system_score_gemma":0.00017365211,"threshold_uncertainty_score":0.9998915},"labels":[],"label_agreement":null},{"id":"W2255148676","doi":"10.1016/j.gene.2016.01.051","title":"Darwin's Pangenesis as a molecular theory of inherited diseases","year":2016,"lang":"en","type":"review","venue":"Gene","topic":"Cancer Genomics and Diagnostics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":7,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"Biology; Mechanism (biology); Genetics; Offspring; Disease; Evolutionary biology; Computational biology","score_opus":0.015339211975333852,"score_gpt":0.28752539031755053,"score_spread":0.2721861783422167,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2255148676","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00043118664,0.99650717,0.00047617892,0.000010284789,0.00020198102,0.0003517108,0.0012585294,0.00000908284,0.0007538646],"genre_scores_gemma":[0.00031188855,0.99769783,0.00016395097,0.00014038471,0.00039424215,0.000103629514,0.00073664327,0.000085775784,0.00036562997],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9986718,0.00012432043,0.00037661087,0.00045844278,0.00012527421,0.00024353749],"domain_scores_gemma":[0.9986981,0.00005656626,0.0002615484,0.0007718846,0.00008485033,0.00012702812],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.000103691855,0.00033155442,0.00074435247,0.00007538148,0.000029443587,0.000014318155,0.00035533833,0.00030462194,0.000121254496],"category_scores_gemma":[0.00018532007,0.0002602561,0.00054148183,0.00010592231,0.00010114666,9.805061e-7,0.00026398688,0.00006036082,0.000049686565],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00003153367,0.000056573375,0.0000026727946,0.0016734521,0.0003989771,0.000022148743,0.0000038096362,8.085553e-7,0.013427797,0.00032254116,0.001403837,0.9826558],"study_design_scores_gemma":[0.00019282059,0.00012758722,0.000004324537,0.0010247272,0.0005603619,0.000019356443,0.000003017405,5.5466504e-8,0.007983635,0.00027895323,0.9894719,0.00033325487],"about_ca_topic_score_codex":0.000006401321,"about_ca_topic_score_gemma":0.0000014630209,"teacher_disagreement_score":0.98806804,"about_ca_system_score_codex":0.000025567362,"about_ca_system_score_gemma":0.00052324886,"threshold_uncertainty_score":0.999985},"labels":[],"label_agreement":null},{"id":"W2263551894","doi":"10.1016/j.gene.2016.01.035","title":"Repetitive transpositions of mitochondrial DNA sequences to the nucleus during the radiation of horseshoe bats (Rhinolophus, Chiroptera)","year":2016,"lang":"en","type":"article","venue":"Gene","topic":"Bat Biology and Ecology Studies","field":"Agricultural and Biological Sciences","cited_by":8,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canada Research Chairs; University of Toronto","funders":"National Natural Science Foundation of China","keywords":"Biology; Mitochondrial DNA; Clade; Evolutionary biology; Phylogenetic tree; Most recent common ancestor; Coalescent theory; Phylogenetics; mtDNA control region; Genetics; Zoology; Gene; Haplotype; Genotype","score_opus":0.010648367922553404,"score_gpt":0.1985710085547489,"score_spread":0.1879226406321955,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2263551894","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9864622,0.00015406348,0.000004814079,0.012571176,0.0002494192,0.00016797584,0.00018039152,0.000010807712,0.00019917247],"genre_scores_gemma":[0.99918175,0.00022438659,0.00004595208,0.00013121855,0.00023131195,0.000024041416,0.0000054487837,3.5211409e-7,0.0001555616],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9994445,0.00008231131,0.0001476438,0.00013534872,0.000057775083,0.00013246376],"domain_scores_gemma":[0.9996294,0.00018472648,0.000072047565,0.000055300887,0.000040352355,0.000018168204],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00008999109,0.00006396076,0.000107607564,0.000006171209,0.00027621948,0.000003174376,0.00018660827,0.00005898771,0.00012032746],"category_scores_gemma":[0.00004303272,0.000014662168,0.000061682375,0.000111334484,0.00021263828,0.00003364842,0.00003125721,0.00003734722,0.000014339545],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00005913874,0.000018786515,0.007838969,0.0000013352295,0.000034381035,5.4359276e-7,0.00034411927,0.0000022912334,0.98362184,0.0001523827,0.00013861613,0.0077875727],"study_design_scores_gemma":[0.00009099445,0.00018780238,0.70250225,0.000009518381,0.000014917387,0.0000036815782,0.00015851516,2.887023e-7,0.2950799,0.00014425757,0.0017627561,0.000045125],"about_ca_topic_score_codex":0.00006612872,"about_ca_topic_score_gemma":0.0012444333,"teacher_disagreement_score":0.6946633,"about_ca_system_score_codex":0.000009088185,"about_ca_system_score_gemma":0.0000041729236,"threshold_uncertainty_score":0.21244848},"labels":[],"label_agreement":null},{"id":"W2276756524","doi":"10.1016/j.gene.2015.12.070","title":"Co- and post-transcriptional regulation of Rbm5 and Rbm10 in mouse cells as evidenced by tissue-specific, developmental and disease-associated variation of splice variant and protein expression levels","year":2016,"lang":"en","type":"article","venue":"Gene","topic":"RNA Research and Splicing","field":"Biochemistry, Genetics and Molecular Biology","cited_by":5,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Ottawa; NOSM University; Health Sciences North; Laurentian University","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Biology; Alternative splicing; Variation (astronomy); splice; Transcriptional regulation; Genetics; Cell biology; Protein expression; Gene; Gene expression; Cancer research; Molecular biology; Messenger RNA","score_opus":0.012684481990257141,"score_gpt":0.24685859340438907,"score_spread":0.2341741114141319,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2276756524","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9974037,0.0010716004,0.00097646745,0.000120407,0.000005714543,0.00026431598,0.00014770812,0.0000020120244,0.000008087743],"genre_scores_gemma":[0.99783105,0.00056782016,0.0010333238,0.000012395068,0.000009280184,0.000011236125,0.00005133977,0.000006786692,0.00047676507],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99933374,0.00006075403,0.00016417039,0.00021154644,0.00012469852,0.000105075924],"domain_scores_gemma":[0.9996979,0.00001818903,0.00006832078,0.00006347208,0.00006179177,0.00009028427],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002000795,0.00007503263,0.000097525,0.00003815604,0.00003640288,0.000008886007,0.00003104858,0.0000723721,0.000011878901],"category_scores_gemma":[0.000070968425,0.000060733448,0.000007701001,0.000030090561,0.000066092536,0.000016050635,0.00003183328,0.000024281791,2.3801536e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00026408487,0.000030841642,0.0016012987,0.000029974242,0.0000097100965,9.4386843e-7,0.00010517594,6.129961e-7,0.9964321,0.000024529387,0.000036104284,0.0014646112],"study_design_scores_gemma":[0.0007703959,0.00011870842,0.15273213,0.00006706308,0.0000028653103,0.000002951276,0.00002611466,0.000018638722,0.8460489,0.00007387382,0.00007132022,0.0000670349],"about_ca_topic_score_codex":0.000052568364,"about_ca_topic_score_gemma":0.000013145262,"teacher_disagreement_score":0.15113083,"about_ca_system_score_codex":0.000012606022,"about_ca_system_score_gemma":0.000049682105,"threshold_uncertainty_score":0.24766381},"labels":[],"label_agreement":null},{"id":"W2279305511","doi":"10.1016/j.gene.2016.01.029","title":"Epigenetic drift towards histone modifications regulates CAV1 gene expression in colon cancer","year":2016,"lang":"en","type":"article","venue":"Gene","topic":"Caveolin-1 and cellular processes","field":"Biochemistry, Genetics and Molecular Biology","cited_by":29,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institute of Technology Rourkela; McGill University","keywords":"Biology; Epigenetics; Cancer epigenetics; DNA methylation; Epigenetics of physical exercise; Epigenomics; H3K4me3; Histone; Epigenome; Epigenetic regulation of neurogenesis; Histone methylation; Cancer research; Regulation of gene expression; Histone methyltransferase; Gene expression; Genetics; Molecular biology; Promoter; Gene","score_opus":0.012505049431375084,"score_gpt":0.2699331916485195,"score_spread":0.2574281422171444,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2279305511","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.983394,0.011139614,0.0040732943,0.00060266524,0.00017914483,0.00016524261,0.00005553253,0.0000160471,0.00037443693],"genre_scores_gemma":[0.988668,0.003605693,0.0009103739,0.00008784665,0.0002399411,0.0001313103,0.00007957799,0.000026356744,0.006250886],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99896353,0.00003444662,0.00021889662,0.0004034103,0.000116628355,0.00026307302],"domain_scores_gemma":[0.9993447,0.0000067868896,0.00007553809,0.00040243228,0.00008684766,0.00008366676],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000084201536,0.00014837386,0.00013933756,0.00005334961,0.00006679214,0.000010551567,0.00019143337,0.0001621542,0.00012379032],"category_scores_gemma":[0.000038343125,0.0001155091,0.000058228015,0.000099401295,0.00007868056,0.000004089082,0.00008871681,0.00004301731,0.000019334471],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000045308876,0.000056157052,0.00065894204,0.000012470751,0.000011103226,0.000004166555,0.00005293529,0.000080008445,0.988131,0.0000070067927,0.0009119626,0.010028955],"study_design_scores_gemma":[0.0005199974,0.000050801435,0.0027839527,0.000028178889,0.000011932686,0.000008980244,0.000011919825,0.000012707424,0.97677034,0.00013294068,0.019482091,0.00018613956],"about_ca_topic_score_codex":0.00011132631,"about_ca_topic_score_gemma":0.00023387255,"teacher_disagreement_score":0.018570129,"about_ca_system_score_codex":0.00004650785,"about_ca_system_score_gemma":0.00016144506,"threshold_uncertainty_score":0.47103244},"labels":[],"label_agreement":null},{"id":"W2281898791","doi":"10.1016/j.gene.2016.02.021","title":"Inferring the determinants of protein evolutionary rates in mammals","year":2016,"lang":"en","type":"article","venue":"Gene","topic":"Genomics and Phylogenetic Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"National Natural Science Foundation of China","keywords":"Biology; Protein evolution; Evolutionary biology; Human evolutionary genetics; Evolutionary dynamics; Rate of evolution; Evolutionary physiology; Evolutionary ecology; Biological evolution; Evolutionary theory; Phylogenetics; Genetics; Gene; Population","score_opus":0.012801413178020823,"score_gpt":0.2445672914900253,"score_spread":0.23176587831200446,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2281898791","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99753934,0.0019751007,0.000035489342,0.0001225915,0.000037399746,0.00012980077,0.000012446809,6.7781673e-7,0.00014717551],"genre_scores_gemma":[0.9990921,0.00022228959,0.00032226247,0.000024101877,0.00006026674,0.000031502892,0.0000010198926,0.0000058922287,0.00024057718],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9995701,0.000025384988,0.00013051408,0.00011770927,0.00004015159,0.00011617355],"domain_scores_gemma":[0.9997342,0.000008996381,0.000043643628,0.00017118423,0.000028761659,0.000013210397],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00010122989,0.000059499023,0.00007308225,0.000015346672,0.0000266994,0.0000018705204,0.00010592105,0.00003632295,0.000005271487],"category_scores_gemma":[0.000039781982,0.00003360227,0.000029202241,0.000030461584,0.00006374684,3.2560374e-7,0.00010663867,0.000013691627,0.0000032407502],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000015258942,0.0000093615445,0.12313509,0.0000037275913,0.00000823144,5.836503e-7,0.00001666644,0.000006802215,0.8727197,0.000020689944,0.00002816181,0.004035747],"study_design_scores_gemma":[0.00019764807,0.000058583435,0.20399913,0.000013477165,0.0000021430815,0.0000029674381,0.000015064169,0.0000049044456,0.7933952,0.00031245206,0.0019456702,0.000052713283],"about_ca_topic_score_codex":0.000016142172,"about_ca_topic_score_gemma":0.00005985224,"teacher_disagreement_score":0.080864035,"about_ca_system_score_codex":0.0000048617517,"about_ca_system_score_gemma":0.000027893531,"threshold_uncertainty_score":0.13702609},"labels":[],"label_agreement":null},{"id":"W2296240596","doi":"10.1016/j.gene.2016.02.040","title":"Calponin isoforms CNN 1, CNN 2 and CNN 3: Regulators for actin cytoskeleton functions in smooth muscle and non-muscle cells","year":2016,"lang":"en","type":"review","venue":"Gene","topic":"Cellular Mechanics and Interactions","field":"Biochemistry, Genetics and Molecular Biology","cited_by":186,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institute of Arthritis and Musculoskeletal and Skin Diseases; National Heart, Lung, and Blood Institute; March of Dimes Foundation; National Institutes of Health; Medical Research Council Canada; Alberta Cancer Board; National Institute of General Medical Sciences; American Heart Association","keywords":"Calponin; Biology; Gene isoform; Cell biology; Cytoskeleton; Actin; Actin cytoskeleton; Myosin; Cell; Biochemistry; Gene","score_opus":0.013426865892410296,"score_gpt":0.26999722221267103,"score_spread":0.2565703563202607,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2296240596","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.013377716,0.97968185,0.0039043594,0.000074068805,0.0008807985,0.0012149593,0.0004125852,0.000016848378,0.0004368264],"genre_scores_gemma":[0.003799484,0.9903668,0.0003992322,0.000051918785,0.0004815957,0.0002414504,0.0005218232,0.00008735391,0.004050319],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99835515,0.000044344142,0.00044020824,0.0006865291,0.00008924938,0.00038454062],"domain_scores_gemma":[0.9990493,0.00004361036,0.0002215284,0.00048317,0.000055788358,0.00014662585],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00023242162,0.00037959238,0.00061093294,0.00015000343,0.00014790968,0.000050786413,0.0001501318,0.00048496068,0.00006187389],"category_scores_gemma":[0.000042773674,0.00030108707,0.00027135553,0.00011453447,0.000049290902,0.000009954173,0.00018094997,0.00018111357,0.000023686416],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000016906622,0.00006475786,0.0000017306365,0.0009633397,0.00008529592,0.0000024983317,0.000016659074,6.430144e-7,0.20859133,0.000039318616,0.0031430789,0.78707445],"study_design_scores_gemma":[0.00041959214,0.00021934458,0.000024248586,0.00063711574,0.0001260557,0.0000101327705,0.00002374462,0.000019386142,0.009619664,0.00004006388,0.98847675,0.00038392135],"about_ca_topic_score_codex":0.000040341798,"about_ca_topic_score_gemma":0.000083726125,"teacher_disagreement_score":0.9853336,"about_ca_system_score_codex":0.00005604758,"about_ca_system_score_gemma":0.00014861024,"threshold_uncertainty_score":0.99994415},"labels":[],"label_agreement":null},{"id":"W2317904624","doi":"10.1016/j.gene.2016.03.057","title":"The complete mitochondrial genomes of four cockroaches (Insecta: Blattodea) and phylogenetic analyses within cockroaches","year":2016,"lang":"en","type":"article","venue":"Gene","topic":"Plant and animal studies","field":"Agricultural and Biological Sciences","cited_by":61,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Carleton University","funders":"University of Chinese Academy of Sciences; National Natural Science Foundation of China","keywords":"Blattodea; Biology; Cockroach; Evolutionary biology; Mitochondrial DNA; Phylogenetic tree; Genome; Zoology; Phylogenetics; Genetics; Ecology; Gene","score_opus":0.16871783524674216,"score_gpt":0.2428128735838609,"score_spread":0.07409503833711872,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2317904624","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9945221,0.00424422,0.0000046777277,0.0007547357,0.000058503094,0.00010153561,0.000118551085,0.000017821983,0.00017787132],"genre_scores_gemma":[0.99813485,0.0011580271,0.00014587912,0.000031895986,0.00028634124,0.000008049449,0.0000040289506,8.661436e-7,0.00023004478],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99917436,0.000060748556,0.0001972959,0.00020730369,0.00014820874,0.00021206471],"domain_scores_gemma":[0.9993696,0.0003959023,0.00010972904,0.00003338152,0.000040157338,0.0000511868],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000106112646,0.00012830799,0.00020927296,0.0000070749543,0.00033137016,0.00003099288,0.00018707251,0.000043121694,0.000019867146],"category_scores_gemma":[0.000039296658,0.000031607276,0.00007235418,0.00010374193,0.00023798221,0.000028390798,0.00010801792,0.00003362066,0.00000777841],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000050314135,0.000011402914,0.022618854,0.000002511738,0.00005947051,0.0000012987739,0.000051208623,9.882212e-7,0.9654957,0.00006125714,0.00015802808,0.011488952],"study_design_scores_gemma":[0.0003005008,0.0003610151,0.90783143,0.00002095964,0.00005931873,0.000013617827,0.00026420702,0.000033224558,0.084610835,0.0010010415,0.0052829543,0.0002209206],"about_ca_topic_score_codex":0.00010758006,"about_ca_topic_score_gemma":0.0020497744,"teacher_disagreement_score":0.88521254,"about_ca_system_score_codex":0.0000064426545,"about_ca_system_score_gemma":0.000004504208,"threshold_uncertainty_score":0.25486648},"labels":[],"label_agreement":null},{"id":"W2318599323","doi":"10.1016/j.gene.2016.04.018","title":"PacBio SMRT assembly of a complex multi-replicon genome reveals chlorocatechol degradative operon in a region of genome plasticity","year":2016,"lang":"en","type":"article","venue":"Gene","topic":"Plant Pathogenic Bacteria Studies","field":"Agricultural and Biological Sciences","cited_by":11,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; University of Toronto; The Scarborough Hospital","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Biology; Genome; Replicon; Operon; Computational biology; Plasmid; Genetics; Sequence assembly; Whole genome sequencing; Gene; Single molecule real time sequencing; Shotgun sequencing; DNA sequencing; Transcriptome","score_opus":0.07588159319462327,"score_gpt":0.24525219478721694,"score_spread":0.16937060159259365,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2318599323","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9985805,0.00013421016,0.00009947292,0.00026669152,0.00002675578,0.00031171794,0.0004968264,0.00002009978,0.0000637111],"genre_scores_gemma":[0.9991175,0.00017683487,0.00044660363,0.000035170655,0.00004449204,0.000023166856,0.00004513509,0.0000013336321,0.000109749664],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9987778,0.000092037706,0.00039893007,0.00032491088,0.00013630702,0.00026999976],"domain_scores_gemma":[0.9993503,0.00017838845,0.0002514895,0.000080637015,0.00008445948,0.00005472745],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00020385976,0.00015645575,0.00039872547,0.000025503856,0.00004849817,0.0000057846014,0.00026590785,0.00008569528,0.000042054286],"category_scores_gemma":[0.000108670654,0.000055020333,0.00007071469,0.00022391787,0.00010681976,0.00008165276,0.00015203455,0.00004861195,0.0000122716365],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000086974425,0.000104860505,0.0064709457,0.000010751946,0.00002271252,0.0000064422265,0.00011164256,0.0000011053066,0.9895815,0.000013633987,0.000011215035,0.0035781846],"study_design_scores_gemma":[0.00037646617,0.00026671417,0.85282737,0.000045893063,0.000010240017,0.000012986272,0.000080972204,0.0000062389213,0.14594944,0.000021980853,0.00026658684,0.00013511711],"about_ca_topic_score_codex":0.00027689154,"about_ca_topic_score_gemma":0.0009654105,"teacher_disagreement_score":0.8463564,"about_ca_system_score_codex":0.000052611224,"about_ca_system_score_gemma":0.0000089724535,"threshold_uncertainty_score":0.22436641},"labels":[],"label_agreement":null},{"id":"W2341657058","doi":"10.1016/j.gene.2016.04.031","title":"Current knowledge of the multifunctional 17β-hydroxysteroid dehydrogenase type 1 (HSD17B1)","year":2016,"lang":"en","type":"review","venue":"Gene","topic":"Estrogen and related hormone effects","field":"Biochemistry, Genetics and Molecular Biology","cited_by":85,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"National Institute of General Medical Sciences; Canadian Institutes of Health Research; National Institutes of Health","keywords":"Biology; Estrogen; Endometrial cancer; Aromatase; Enzyme; Androgen; Cancer research; Breast cancer; Cancer; Endocrinology; Hydroxysteroid dehydrogenase; Internal medicine; Dehydrogenase; Biochemistry; Hormone; Genetics; Medicine","score_opus":0.020726800477987594,"score_gpt":0.30942011660089064,"score_spread":0.28869331612290305,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2341657058","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0019481328,0.99540806,0.000026362039,0.000004838911,0.0017114478,0.00045844945,0.00009913709,0.00000943483,0.00033414457],"genre_scores_gemma":[0.00070782425,0.9968782,0.000024382212,0.000007703662,0.0006734506,0.000043491364,0.00024793524,0.00005439426,0.0013626373],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9986084,0.00021091853,0.0003976297,0.00041076262,0.00011899546,0.00025325813],"domain_scores_gemma":[0.9988422,0.000025964422,0.00028282125,0.0006605372,0.00009885225,0.00008964623],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015508471,0.00034004299,0.00054486224,0.000052763917,0.00007543101,0.0000073166593,0.00040284684,0.0004437888,0.000031268002],"category_scores_gemma":[0.000058170677,0.00018252931,0.0006262636,0.00016669117,0.000110076326,0.0000014562928,0.00028568413,0.00022531932,0.00025981004],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000025853506,0.00016714084,0.000009028106,0.0028029818,0.0005214861,0.000001988302,0.000011369649,0.0000021436572,0.029473998,0.000021256143,0.0053005973,0.9616622],"study_design_scores_gemma":[0.00023492322,0.00010422625,0.0000018865978,0.0020351969,0.00027203865,0.000064248045,5.2122823e-7,0.0000020383407,0.021133559,0.0000051910656,0.975919,0.00022718217],"about_ca_topic_score_codex":0.0000012724763,"about_ca_topic_score_gemma":0.0000013464544,"teacher_disagreement_score":0.97061837,"about_ca_system_score_codex":0.00003331137,"about_ca_system_score_gemma":0.00043613737,"threshold_uncertainty_score":0.74433297},"labels":[],"label_agreement":null},{"id":"W2410340000","doi":"10.1016/j.gene.2016.05.038","title":"Analysis of the structure, evolution, and expression of CD24, an important regulator of cell fate","year":2016,"lang":"en","type":"article","venue":"Gene","topic":"Immune Cell Function and Interaction","field":"Immunology and Microbiology","cited_by":33,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Memorial University of Newfoundland","funders":"Canadian Institutes of Health Research; Memorial University of Newfoundland","keywords":"Biology; CD24; Cell biology; Untranslated region; Gene; Genetics; Messenger RNA; Cell; CD44","score_opus":0.005279083108629209,"score_gpt":0.20162317565499524,"score_spread":0.19634409254636603,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2410340000","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9984601,0.00070086727,0.00025424873,0.000014929574,0.00042306585,0.00004747398,0.000031958898,0.0000034973477,0.000063845015],"genre_scores_gemma":[0.9987255,0.000048563666,0.0000339303,0.000007771306,0.0000047094404,5.257376e-7,0.000024087383,0.0000030706917,0.0011518387],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9994646,0.00008054565,0.00026665867,0.000100667115,0.000022902013,0.0000646502],"domain_scores_gemma":[0.9993351,0.000020164362,0.00029433487,0.00025778133,0.00008647161,0.0000061375763],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00007602506,0.000054084543,0.00016360167,0.00009208241,0.000033122098,7.0954775e-7,0.00007041884,0.000081482074,0.0008167424],"category_scores_gemma":[0.000017585966,0.000028222717,0.0000713351,0.00013194134,0.000103105805,0.000047262496,0.000033183427,0.000034559784,0.0000010310999],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009486203,0.00002781328,0.01980868,0.0000061034375,0.00010914741,2.0919389e-8,0.00009650869,0.0000059169847,0.97931725,0.000054580603,0.00025598833,0.00022313968],"study_design_scores_gemma":[0.00028930386,0.000060921306,0.12318384,0.000010946382,0.0001454836,0.0000017499864,0.00006278454,0.0000060859925,0.8756326,0.000045807847,0.000530357,0.000030124085],"about_ca_topic_score_codex":0.000051393174,"about_ca_topic_score_gemma":0.000012098665,"teacher_disagreement_score":0.10368465,"about_ca_system_score_codex":0.000009563768,"about_ca_system_score_gemma":0.000015696089,"threshold_uncertainty_score":0.89427567},"labels":[],"label_agreement":null},{"id":"W2413722165","doi":"10.1016/j.gene.2016.06.003","title":"A global study of transcriptome dynamics in canola (Brassica napus L.) responsive to Sclerotinia sclerotiorum infection using RNA-Seq","year":2016,"lang":"en","type":"article","venue":"Gene","topic":"Plant pathogens and resistance mechanisms","field":"Agricultural and Biological Sciences","cited_by":70,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"Biology; Sclerotinia sclerotiorum; Canola; Transcriptome; Sclerotinia; WRKY protein domain; Pathogen; Gene; Brassica; Host (biology); Jasmonate; Genetics; RNA-Seq; Virulence; Stem rot; Host–pathogen interaction; Microbiology; Gene expression; Botany; Arabidopsis","score_opus":0.0260317234786396,"score_gpt":0.23714650739788037,"score_spread":0.21111478391924077,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2413722165","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9984377,0.00001862219,0.00015583615,0.0003486444,0.00022202614,0.00042577274,0.00030732015,0.000025314801,0.000058733334],"genre_scores_gemma":[0.9996432,0.000013735479,0.00014896304,0.00004718989,0.00005490813,0.000014142845,0.000005202301,0.0000010529888,0.000071591596],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9988983,0.00010333969,0.00024422686,0.00027853032,0.00020085517,0.0002747115],"domain_scores_gemma":[0.99967366,0.000031697542,0.00007867375,0.00006427362,0.00006485893,0.00008681343],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00020796286,0.00012340475,0.00020115354,0.000031422507,0.000092745584,0.000016763543,0.0001340269,0.00007814868,0.00003096192],"category_scores_gemma":[0.000028431414,0.00004532169,0.00005209676,0.0006152357,0.000020541509,0.00006510717,0.000041845753,0.000037944905,0.000005426912],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013537862,0.00017450603,0.042133357,0.0000021092253,0.000008751389,0.000010672106,0.000051164672,0.000026964077,0.9467006,0.00007634423,0.000009787329,0.010670383],"study_design_scores_gemma":[0.000630733,0.00088100025,0.96907496,0.000115347706,0.000017659228,0.000012518301,0.0005498416,0.00012115057,0.028038565,0.0001781621,0.0001513335,0.00022871776],"about_ca_topic_score_codex":0.0015227435,"about_ca_topic_score_gemma":0.08838246,"teacher_disagreement_score":0.92694163,"about_ca_system_score_codex":0.00021345391,"about_ca_system_score_gemma":0.000017609276,"threshold_uncertainty_score":0.92825216},"labels":[],"label_agreement":null},{"id":"W2475856355","doi":"10.1016/j.gene.2016.07.070","title":"Apolipoprotein A5 fifteen years anniversary: Lessons from genetic epidemiology","year":2016,"lang":"en","type":"review","venue":"Gene","topic":"Lipid metabolism and disorders","field":"Medicine","cited_by":44,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institute of General Medical Sciences; Ministry of Health, British Columbia","keywords":"Biology; Apolipoprotein B; Lipoprotein lipase; Triglyceride; Very low-density lipoprotein; Lipoprotein; Internal medicine; Endocrinology; Allele; Hepatic lipase; Genetics; Myocardial infarction; Gene; Cholesterol; Adipose tissue; Medicine","score_opus":0.09911506713853692,"score_gpt":0.3878284763953402,"score_spread":0.2887134092568033,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2475856355","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000086844215,0.9955207,0.00027513903,0.0006698845,0.00082936184,0.00092177955,0.0006926227,0.00008369764,0.00091993716],"genre_scores_gemma":[0.0000068481486,0.9896149,0.00416407,0.00058954733,0.0024277754,0.000099212004,0.0005735281,0.00009579118,0.0024283167],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9974636,0.0003564576,0.000668356,0.00074250036,0.00017811733,0.0005910044],"domain_scores_gemma":[0.99795455,0.00031159288,0.00034076214,0.0010269483,0.00003843749,0.00032771198],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.0002792889,0.00045414345,0.0027614306,0.00022150017,0.000041594743,0.000006259075,0.00031918508,0.0006203487,0.0011012916],"category_scores_gemma":[0.00037668252,0.00031912938,0.00069371925,0.00018199859,0.00014848058,0.000033332162,0.00016089722,0.0003309772,0.0024048686],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000012262305,0.00003232093,0.000024841118,0.0009734365,0.00028684986,0.000055039967,0.00003823506,1.4941241e-7,0.0000075150087,0.00009053112,0.008397171,0.99008167],"study_design_scores_gemma":[0.0007133272,0.000046506208,0.00054798106,0.002733909,0.0014402268,0.0000304686,0.000007687193,7.321299e-7,0.0000040628333,0.00057218753,0.99357057,0.00033231833],"about_ca_topic_score_codex":0.00045660153,"about_ca_topic_score_gemma":0.000008337228,"teacher_disagreement_score":0.9897493,"about_ca_system_score_codex":0.00007471823,"about_ca_system_score_gemma":0.0005158266,"threshold_uncertainty_score":0.9999261},"labels":[],"label_agreement":null},{"id":"W2494833949","doi":"10.1016/j.gene.2016.08.010","title":"Response of the JAK-STAT signaling pathway to oxygen deprivation in the red eared slider turtle, Trachemys scripta elegans","year":2016,"lang":"en","type":"article","venue":"Gene","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":8,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Carleton University","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Biology; Turtle (robot); stat; JAK-STAT signaling pathway; Signal transduction; Cell biology; Phosphorylation; Ecology","score_opus":0.018400044338934947,"score_gpt":0.23279405131491157,"score_spread":0.21439400697597663,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2494833949","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9932826,0.0005344818,0.00040700153,0.0048352983,0.00043914584,0.00029743425,0.000033040287,0.000015838803,0.00015513324],"genre_scores_gemma":[0.99195594,0.000010753743,0.00006232204,0.0008697539,0.000014628545,0.000026536476,0.000006525821,0.000012813423,0.0070407325],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99813294,0.001064395,0.00030582966,0.00018751314,0.00005135541,0.0002579584],"domain_scores_gemma":[0.9991009,0.00027720758,0.00008718047,0.00046008627,0.000064654174,0.000009920725],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009581934,0.00011927707,0.00015910048,0.00009494873,0.00009647218,0.000009435238,0.00042731094,0.00013057822,0.00023027114],"category_scores_gemma":[0.00064470543,0.000058295573,0.00008709432,0.00020180238,0.0000894315,0.00005288926,0.000081625134,0.00013123995,0.00012912942],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0027180754,0.00004558571,0.00041545366,0.0000024413878,0.000032135904,0.0000018554367,0.002408188,0.0000022603779,0.98952824,0.000095216805,0.002727869,0.002022693],"study_design_scores_gemma":[0.00088480534,0.00013710037,0.03800493,0.000047400637,0.000008388478,0.000021681835,0.0005386711,4.3562972e-7,0.9164223,0.00005386935,0.043795522,0.00008486943],"about_ca_topic_score_codex":0.00004461768,"about_ca_topic_score_gemma":0.000028089271,"teacher_disagreement_score":0.0731059,"about_ca_system_score_codex":0.000043989192,"about_ca_system_score_gemma":0.00007817486,"threshold_uncertainty_score":0.25213075},"labels":[],"label_agreement":null},{"id":"W2508618197","doi":"10.1016/j.gene.2016.09.013","title":"Disruption of the UBF gene induces aberrant somatic nucleolar bodies and disrupts embryo nucleolar precursor bodies","year":2016,"lang":"en","type":"article","venue":"Gene","topic":"Genomics and Chromatin Dynamics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":18,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"Fonds de Recherche du Québec - Santé; Canadian Institutes of Health Research","keywords":"Nucleolus; Biology; Ribosome biogenesis; Transcription (linguistics); Gene; Cell biology; Somatic cell; Nucleolus organizer region; Heterochromatin; Molecular biology; Genetics; RNA; Chromosome; Ribosome; Nucleus","score_opus":0.007721494546086114,"score_gpt":0.21820678179632372,"score_spread":0.2104852872502376,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2508618197","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99656105,0.002073522,0.000245603,0.00036436736,0.00019834992,0.00021224326,0.00009573189,0.000010477474,0.00023863323],"genre_scores_gemma":[0.99662745,0.0013396541,0.0011186999,0.00006875518,0.00011368072,0.000016111155,0.000019849695,0.00002869495,0.00066712976],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99899054,0.000059240505,0.00027810098,0.00029916977,0.00013695164,0.00023600772],"domain_scores_gemma":[0.99921167,0.000015300433,0.00018113543,0.00046780423,0.000064131986,0.00005998101],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014913015,0.00018849532,0.00019586402,0.000026889331,0.0001386738,0.000025092406,0.00024283561,0.00013577964,0.000012949416],"category_scores_gemma":[0.00006500201,0.00011389572,0.00010113653,0.000025419493,0.00019467951,0.0000081346725,0.00027104697,0.00005047525,0.000007132802],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000021756756,0.000041420742,0.00408486,0.00004855195,0.000075496995,6.965011e-7,0.0003577336,0.000008402772,0.9910346,0.000046468045,0.00012738438,0.0041525746],"study_design_scores_gemma":[0.0006581071,0.00017121798,0.09225103,0.00006834221,0.000070148766,0.000031384774,0.0001674193,0.00013655299,0.9038397,0.0010034565,0.0013341235,0.000268492],"about_ca_topic_score_codex":0.000011522616,"about_ca_topic_score_gemma":0.00007849755,"teacher_disagreement_score":0.08816617,"about_ca_system_score_codex":0.000014475865,"about_ca_system_score_gemma":0.000036876776,"threshold_uncertainty_score":0.46445328},"labels":[],"label_agreement":null},{"id":"W2515118660","doi":"10.1016/j.gene.2016.09.006","title":"Gene structure, expression, and DNA methylation characteristics of sea cucumber cyclin B gene during aestivation","year":2016,"lang":"en","type":"article","venue":"Gene","topic":"Echinoderm biology and ecology","field":"Agricultural and Biological Sciences","cited_by":17,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Carleton University","funders":"National Natural Science Foundation of China","keywords":"Aestivation; Biology; DNA methylation; Cell cycle; Molecular biology; Cyclin A; Cyclin B; Gene expression; Gene; Cyclin; Genetics","score_opus":0.011869990367376147,"score_gpt":0.2071042095599437,"score_spread":0.19523421919256756,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2515118660","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99920917,0.00008403969,0.000034231853,0.00031058464,0.00012214581,0.00008092141,0.0001196863,0.00002075542,0.000018450271],"genre_scores_gemma":[0.9988957,0.00013780892,0.0005042097,0.000055365206,0.00020558402,0.0000041167627,0.00010893179,9.02597e-7,0.000087350505],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99931675,0.00006718416,0.00020230225,0.00020361393,0.000057342557,0.00015281071],"domain_scores_gemma":[0.99962527,0.00009510761,0.00013843131,0.000047756428,0.000048753685,0.00004468962],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000098934426,0.0000888085,0.00014183029,0.000010984762,0.000115531446,0.000005403538,0.00007438363,0.0001585774,0.00029634606],"category_scores_gemma":[0.00006693497,0.000030985626,0.000021223415,0.00006534076,0.00006255876,0.00007372574,0.000059754046,0.000043971097,0.0000061510705],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000026044218,0.000009182985,0.21359706,0.0000025070299,0.000005810975,9.838295e-7,0.000014176438,3.0511487e-7,0.77059555,0.000007386653,0.000012227005,0.01572877],"study_design_scores_gemma":[0.0000879003,0.00003290087,0.47739023,0.0000041568073,0.0000045185066,0.000007432287,0.000002103252,0.00000490414,0.52189255,0.00047022864,0.000055415527,0.000047678335],"about_ca_topic_score_codex":0.00004296283,"about_ca_topic_score_gemma":0.00017699838,"teacher_disagreement_score":0.26379317,"about_ca_system_score_codex":0.000009336033,"about_ca_system_score_gemma":0.000003604658,"threshold_uncertainty_score":0.32447818},"labels":[],"label_agreement":null},{"id":"W2522323381","doi":"10.1016/j.gene.2016.09.029","title":"Meeting report for Odd Pols 2016: Ann Arbor 2.0","year":2016,"lang":"en","type":"editorial","venue":"Gene","topic":"Plant and Fungal Interactions Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institutes of Health; University of Auckland; University of Tokyo; University of Edinburgh; University of Alabama; Michigan State University; Université Laval; Ohio State University","keywords":"Biology; Genetics; Computational biology","score_opus":0.013301445544630475,"score_gpt":0.3361698270225283,"score_spread":0.3228683814778978,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2522323381","genre_codex":"editorial","genre_gemma":"editorial","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"editorial","genre_consensus":"editorial","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0013527219,0.0026953374,0.0024655098,0.00024006834,0.97990704,0.0005750234,0.003003959,0.00003098534,0.009729342],"genre_scores_gemma":[0.00036237974,0.0010559474,0.0006700488,0.00002278657,0.8886749,0.00015688772,0.009389591,0.00005786194,0.099609576],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.998421,0.00003770001,0.00030705117,0.00054424605,0.0002892377,0.00040076792],"domain_scores_gemma":[0.9986271,0.00014614989,0.0001836065,0.0004916716,0.00045044522,0.00010100846],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00043858908,0.00021602772,0.00022956087,0.00007435897,0.00011159016,0.000049061175,0.00030117994,0.00075222173,0.000038846738],"category_scores_gemma":[0.0016658487,0.0001742817,0.00019429723,0.000036611018,0.00004012681,0.0000030867234,0.00014789893,0.00022261332,0.00006899286],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000093997834,0.00001443652,0.0000051387965,0.000018592482,0.00007474348,0.000020365937,0.0000013803467,3.3515911e-7,0.40524873,6.0030754e-7,0.59412444,0.0003972508],"study_design_scores_gemma":[0.00023644269,0.00012362175,0.0000018958021,0.000057352398,0.000020704156,0.00002617485,0.0000023331277,0.0000039164192,0.18290247,0.000014968657,0.8164129,0.00019718113],"about_ca_topic_score_codex":0.00004109827,"about_ca_topic_score_gemma":0.000025738294,"teacher_disagreement_score":0.22234626,"about_ca_system_score_codex":0.000033854758,"about_ca_system_score_gemma":0.00044917967,"threshold_uncertainty_score":0.7107001},"labels":[],"label_agreement":null},{"id":"W2548860411","doi":"10.1016/j.gene.2016.10.043","title":"Characterization of soluble N-ethylmaleimide-sensitive factor attachment protein receptor gene STX18 variations for possible roles in congenital heart diseases","year":2016,"lang":"en","type":"article","venue":"Gene","topic":"Congenital heart defects research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":8,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"Biology; Gene; Receptor; Genetics; Molecular biology; Cell biology","score_opus":0.015855121018624074,"score_gpt":0.28329559472102644,"score_spread":0.26744047370240237,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2548860411","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99222684,0.0001626949,0.0046334304,0.00032446414,0.00009397415,0.001146958,0.0013832292,0.000011438042,0.000016960335],"genre_scores_gemma":[0.99618113,0.00004817322,0.0011084247,0.000030652598,0.00016315356,0.0002848392,0.000527689,0.000027326736,0.0016285981],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9988442,0.000088690744,0.00025496364,0.00034270735,0.00016560878,0.00030381634],"domain_scores_gemma":[0.9992866,0.000034859575,0.00006846653,0.000263207,0.00024329059,0.000103584294],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000113746435,0.00013883872,0.00017938556,0.00009088435,0.000060173024,0.000017889157,0.00009592711,0.000108084874,0.000056785764],"category_scores_gemma":[0.00014615014,0.00011691618,0.00009667998,0.000106346044,0.000064035645,0.0000145094355,0.0001028669,0.00003912346,0.00001860255],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002805474,0.0001297095,0.006037846,0.000026131047,0.00004936158,8.76454e-7,0.000043739048,0.0000017331688,0.99024516,0.000016284432,0.000044593788,0.0031240154],"study_design_scores_gemma":[0.0008607569,0.00038735662,0.034389783,0.000023855375,0.000010139571,0.0000022094289,0.000012951833,0.000036489488,0.9627806,0.000020119318,0.0013260656,0.00014967452],"about_ca_topic_score_codex":0.000021913478,"about_ca_topic_score_gemma":0.00009037594,"teacher_disagreement_score":0.028351936,"about_ca_system_score_codex":0.000045731394,"about_ca_system_score_gemma":0.00019624122,"threshold_uncertainty_score":0.4767703},"labels":[],"label_agreement":null},{"id":"W2567532430","doi":"10.1016/j.gene.2016.12.025","title":"Sequence motifs associated with paternal transmission of mitochondrial DNA in the horse mussel, Modiolus modiolus (Bivalvia: Mytilidae)","year":2016,"lang":"en","type":"article","venue":"Gene","topic":"Aquatic Invertebrate Ecology and Behavior","field":"Environmental Science","cited_by":19,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Acadia University","funders":"","keywords":"Biology; Mitochondrial DNA; Mytilidae; mtDNA control region; Genetics; Genome; Evolutionary biology; Gene; Bivalvia; Zoology; Mollusca; Allele; Haplotype","score_opus":0.01958744148292568,"score_gpt":0.22197676302978275,"score_spread":0.20238932154685707,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2567532430","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99554694,0.000010237679,0.0032470585,0.00037722167,0.00013359792,0.0002903881,0.000017589178,0.000015624797,0.00036136314],"genre_scores_gemma":[0.9987182,0.000013529725,0.0005929656,0.00013417931,0.000036561887,0.000028332634,0.0000060718367,0.00001060211,0.00045957862],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9985899,0.00022677431,0.00025393497,0.0002792966,0.00033819012,0.00031192167],"domain_scores_gemma":[0.99945134,0.00011583784,0.000113883536,0.00024959297,0.000010755071,0.000058561716],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0003479614,0.00014530872,0.00019120381,0.000027322434,0.00008975833,0.000008267878,0.0003828493,0.0001404991,0.0017131955],"category_scores_gemma":[0.000047513062,0.00007321345,0.000051918258,0.00018186656,0.0003141263,0.00015821922,0.00004577833,0.00012529278,0.00019700936],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00018560598,0.00035600312,0.107336745,0.000004514037,0.000020595402,0.00009986028,0.0015526853,0.0005262916,0.8755957,0.0000162018,0.0012074425,0.013098349],"study_design_scores_gemma":[0.004743581,0.0010314657,0.7783992,0.00015230276,0.000120211975,0.000056381337,0.0002164459,0.0040795607,0.20878704,0.0015750709,0.00028185968,0.00055682706],"about_ca_topic_score_codex":0.00021722894,"about_ca_topic_score_gemma":0.00038632835,"teacher_disagreement_score":0.6710625,"about_ca_system_score_codex":0.00014279711,"about_ca_system_score_gemma":0.00003113962,"threshold_uncertainty_score":0.9991994},"labels":[],"label_agreement":null},{"id":"W2572266215","doi":"10.1016/j.gene.2017.01.018","title":"The p53 protein induces stable miRNAs that have the potential to modify subsequent p53 responses","year":2017,"lang":"en","type":"article","venue":"Gene","topic":"Cancer-related gene regulation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":13,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Carleton University; Ottawa Hospital","funders":"Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research; Carleton University","keywords":"Biology; microRNA; Mdm2; Messenger RNA; Molecular biology; Downregulation and upregulation; Suppressor; Microarray; Transcription (linguistics); Cell biology; Gene expression; Cancer research; Genetics; Gene","score_opus":0.024729231429530756,"score_gpt":0.2777531385274049,"score_spread":0.25302390709787415,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2572266215","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99127704,0.0016499184,0.00056593143,0.0051771724,0.00035714192,0.00062494056,0.000028278791,0.000010573658,0.00030899904],"genre_scores_gemma":[0.99035317,0.00017469618,0.00018663885,0.00011896558,0.0005021096,0.00012683,0.00002339827,0.000023652838,0.008490563],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9989045,0.0001068235,0.00014827766,0.0003117682,0.00022296405,0.00030565946],"domain_scores_gemma":[0.998584,0.000009662206,0.00014984855,0.0010909167,0.00009282595,0.000072767536],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000391955,0.00014657153,0.000093286886,0.000020580197,0.0009532624,0.00023101462,0.00055911497,0.00014801264,0.000012874404],"category_scores_gemma":[0.00012119892,0.00009362877,0.000083758685,0.00002913589,0.00013859179,0.000006984552,0.00027031262,0.00010307645,0.000020973519],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00032711215,0.000012716186,0.00010036905,0.0000026184002,0.00004559843,0.0000023307311,0.000053220396,0.00070297706,0.98955196,0.000027241591,0.0017101145,0.007463758],"study_design_scores_gemma":[0.00027078742,0.00010588701,0.008183309,0.000009938431,0.000017984214,0.000012364357,0.00007473927,0.00008025769,0.93469894,0.0001542588,0.056252744,0.00013876897],"about_ca_topic_score_codex":0.0002757114,"about_ca_topic_score_gemma":0.00059758377,"teacher_disagreement_score":0.05485298,"about_ca_system_score_codex":0.00003972925,"about_ca_system_score_gemma":0.00014113504,"threshold_uncertainty_score":0.733182},"labels":[],"label_agreement":null},{"id":"W2582809553","doi":"10.1016/j.gene.2017.01.029","title":"The fate of retrotransposed processed genes in Arabidopsis thaliana","year":2017,"lang":"en","type":"article","venue":"Gene","topic":"Genomics and Phylogenetic Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Ottawa","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Biology; Gene; Genetics; Arabidopsis thaliana; Brassica rapa; Genome; Arabidopsis; Negative selection; Candidate gene","score_opus":0.016275833592787923,"score_gpt":0.24953471292965265,"score_spread":0.23325887933686473,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2582809553","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99370116,0.0047287876,0.000032526532,0.00029964678,0.00011080042,0.000118847136,0.00001534232,9.037458e-7,0.0009919706],"genre_scores_gemma":[0.9966802,0.002629641,0.0002578736,0.000029103538,0.00008385358,0.000018468796,0.000005346994,0.00000955177,0.00028598326],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9994335,0.000017079115,0.00015120365,0.00017212404,0.00006393326,0.00016215867],"domain_scores_gemma":[0.9993044,0.0000064975156,0.00010689239,0.0005028868,0.000056617417,0.000022711509],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015359724,0.00008614199,0.00010783971,0.000012008154,0.00020025541,0.00002614442,0.00035476347,0.000055940807,0.000001707284],"category_scores_gemma":[0.000044444158,0.000062999556,0.0000526105,0.000022111022,0.00012517914,5.9361935e-7,0.000072637995,0.000030315154,0.0000015171685],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000049217113,0.000013831131,0.02978772,0.000011891253,0.000038222814,0.000001028697,0.00004999255,0.000033670156,0.96488833,0.000026913869,0.00005380872,0.0050453804],"study_design_scores_gemma":[0.00033431608,0.000067888635,0.16062514,0.0000052198525,0.000008519168,0.0000011692144,0.000045570196,0.000011852412,0.83173203,0.0001916368,0.0068940246,0.000082604376],"about_ca_topic_score_codex":0.00006263934,"about_ca_topic_score_gemma":0.00036350035,"teacher_disagreement_score":0.13315627,"about_ca_system_score_codex":0.0000032849432,"about_ca_system_score_gemma":0.000035628735,"threshold_uncertainty_score":0.25690472},"labels":[],"label_agreement":null},{"id":"W2611735579","doi":"10.1016/j.gene.2017.04.051","title":"LTR-retrotransposons in plants: Engines of evolution","year":2017,"lang":"en","type":"review","venue":"Gene","topic":"Chromosomal and Genetic Variations","field":"Agricultural and Biological Sciences","cited_by":256,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia, Okanagan Campus; University of Alberta","funders":"","keywords":"Retrotransposon; Biology; Genetics; Gene; Genome; Transposable element; Gene duplication; Exaptation; Genome evolution; Evolutionary biology","score_opus":0.0813706254768049,"score_gpt":0.2960528166923125,"score_spread":0.21468219121550758,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2611735579","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0013002306,0.99739945,0.0000022303088,0.00004312229,0.00015232772,0.00023305154,0.00057248096,0.000011796105,0.0002853352],"genre_scores_gemma":[0.003079704,0.99607843,0.00005969297,0.000002185032,0.00024253,0.000029946317,0.00032353803,7.705836e-7,0.00018317188],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.999255,0.000043242486,0.00027628298,0.0001867239,0.0000939562,0.00014478737],"domain_scores_gemma":[0.99963206,0.000063047955,0.00017135144,0.00008146466,0.000017926932,0.00003412838],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00007461427,0.00013724648,0.00052516424,0.000019200897,0.00006539584,0.000011975257,0.00028310917,0.00017100695,0.00013561558],"category_scores_gemma":[0.000022546099,0.000048222388,0.00019152468,0.00011726795,0.0000246977,0.000024581817,0.000028600827,0.00008776822,0.000030067915],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000011475141,0.000038465845,0.00006869041,0.00035387653,0.000016772612,0.000002476015,0.000011304863,0.0000012058565,0.0010358976,0.00007585056,0.00002521051,0.9983691],"study_design_scores_gemma":[0.00004414097,0.00004845966,0.0033890118,0.0014945534,0.00005821505,0.00001034595,0.0000044352714,0.0000023894413,0.000037669055,0.00016312265,0.9946013,0.00014634021],"about_ca_topic_score_codex":0.00021243685,"about_ca_topic_score_gemma":0.0008783124,"teacher_disagreement_score":0.99822277,"about_ca_system_score_codex":0.000024114785,"about_ca_system_score_gemma":0.00002626828,"threshold_uncertainty_score":0.19664519},"labels":[],"label_agreement":null},{"id":"W2615568708","doi":"10.1016/j.gene.2017.05.041","title":"Structural annotation of Beta-1,4- N -acetyl galactosaminyltransferase 1 (B4GALNT1) causing Hereditary Spastic Paraplegia 26","year":2017,"lang":"en","type":"article","venue":"Gene","topic":"Glycosylation and Glycoproteins Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":9,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Higher Education Commission, Pakistan","keywords":"Biology; Hereditary spastic paraplegia; In silico; Gene; Transmembrane domain; Peptide sequence; Signal peptide; Transmembrane protein; Genetics; Missense mutation; Biochemistry; Mutant; Mutation; Receptor; Phenotype","score_opus":0.026902836444591734,"score_gpt":0.29835070453604445,"score_spread":0.2714478680914527,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2615568708","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9962327,0.00030061844,0.0023175546,0.00024248956,0.00021790303,0.00021014731,0.00006203786,0.00001109164,0.00040549686],"genre_scores_gemma":[0.99811006,0.000045378692,0.0010182104,0.000036553185,0.00029864,0.000010693137,0.00018999702,0.000023730501,0.0002667465],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9990051,0.000047664238,0.000208818,0.00027222213,0.00022396036,0.00024225425],"domain_scores_gemma":[0.9990627,0.00000832975,0.00010537912,0.00057608227,0.00015285905,0.000094634575],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014261989,0.00013592209,0.00015043,0.0000471699,0.0002463063,0.000051594263,0.00020153474,0.00011744239,0.00010510038],"category_scores_gemma":[0.0001118017,0.00013013369,0.0000844145,0.00003968363,0.0001407344,0.000012900025,0.000073478586,0.00008941029,0.000010658715],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012780646,0.000017152655,0.004458033,0.000033912736,0.000043266664,0.0000149935195,0.000042887907,0.00019705346,0.9912184,0.000027459764,0.00032488976,0.0034941835],"study_design_scores_gemma":[0.0008045377,0.00024670764,0.07310332,0.000013580528,0.000018205974,0.00003524687,0.000028658607,0.00061252184,0.9236327,0.00005110431,0.0012800745,0.00017337399],"about_ca_topic_score_codex":0.00014674885,"about_ca_topic_score_gemma":0.00011710072,"teacher_disagreement_score":0.06864529,"about_ca_system_score_codex":0.00001053683,"about_ca_system_score_gemma":0.00008774432,"threshold_uncertainty_score":0.5306698},"labels":[],"label_agreement":null},{"id":"W2754593097","doi":"10.1016/j.gene.2017.09.020","title":"Transcriptome profiling of the Plutella xylostella (Lepidoptera: Plutellidae) ovary reveals genes involved in oogenesis","year":2017,"lang":"en","type":"article","venue":"Gene","topic":"Neurobiology and Insect Physiology Research","field":"Neuroscience","cited_by":28,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Brock University","funders":"National Natural Science Foundation of China","keywords":"Biology; Plutellidae; Plutella; Lepidoptera genitalia; Transcriptome; Oogenesis; Gene; Diamondback moth; Ovary; Gene expression profiling; Genetics; Botany; Gene expression; Embryogenesis","score_opus":0.06786542257239866,"score_gpt":0.306039675296918,"score_spread":0.23817425272451934,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2754593097","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99593806,0.00046022388,0.000008388151,0.000418782,0.0005771377,0.00048617227,0.000026382642,0.000021577758,0.0020632774],"genre_scores_gemma":[0.9980201,0.000613898,0.00012511996,0.000507949,0.00011308013,0.000032606353,0.000002004145,0.000021507838,0.0005637001],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99780834,0.000544835,0.0004010817,0.0005578829,0.0002004596,0.00048738185],"domain_scores_gemma":[0.99824345,0.00025936193,0.00021624823,0.0011713298,0.000046093435,0.00006351546],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00045906202,0.00019666813,0.00035331698,0.00011236321,0.00048134493,0.000031942844,0.0014490922,0.00017173351,0.000057173438],"category_scores_gemma":[0.00036826788,0.00014207387,0.00015434835,0.0001963197,0.0007470155,0.0001434989,0.00031205962,0.00032523388,0.000048682938],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012045634,0.000073644645,0.032659627,0.000037743917,0.000007550624,0.000019401305,0.00011720041,0.000044099856,0.965759,0.000262229,0.00003675614,0.0008623334],"study_design_scores_gemma":[0.0004216494,0.00007270153,0.028270995,0.000028996901,0.000007754684,0.000011056102,0.000011082665,0.000056777593,0.9700866,0.0007622196,0.00013400713,0.00013620492],"about_ca_topic_score_codex":0.000034132074,"about_ca_topic_score_gemma":0.000013616279,"teacher_disagreement_score":0.0043886323,"about_ca_system_score_codex":0.000020704298,"about_ca_system_score_gemma":0.00008856866,"threshold_uncertainty_score":0.5793604},"labels":[],"label_agreement":null},{"id":"W2754930359","doi":"10.1016/j.gene.2017.09.017","title":"Cooperative regulation of Gja1 expression by members of the AP-1 family cJun and cFos in TM3 Leydig and TM4 Sertoli cells","year":2017,"lang":"en","type":"article","venue":"Gene","topic":"Sperm and Testicular Function","field":"Medicine","cited_by":29,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Moncton","funders":"Natural Sciences and Engineering Research Council of Canada; New Brunswick Innovation Foundation","keywords":"Sertoli cell; Biology; Leydig cell; Cell biology; Spermatogenesis; Internal medicine; Endocrinology; Hormone; Luteinizing hormone","score_opus":0.014283435155980389,"score_gpt":0.24283845526605016,"score_spread":0.22855502011006978,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2754930359","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99810237,0.0005418798,0.00007321247,0.0001391786,0.00009044658,0.00020451436,0.0000069509333,0.000003485718,0.00083794637],"genre_scores_gemma":[0.9992267,0.000102068385,0.00023619234,0.000040169853,0.000023296656,0.0000032513883,0.000006601213,0.0000053675126,0.00035633656],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9995884,0.000024310322,0.000117052485,0.0001090198,0.00010313692,0.000058136924],"domain_scores_gemma":[0.99958766,0.000022012364,0.00009758372,0.00021414686,0.000051055576,0.00002754184],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00008040214,0.000057247173,0.00013120698,0.000022791975,0.000060012062,0.0000067128813,0.00003197797,0.000051390798,0.000016575394],"category_scores_gemma":[0.000071027374,0.000037409132,0.000015151837,0.000031845862,0.000096187956,0.000053871536,0.00003592077,0.000045483044,4.71581e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000058386562,0.000025933194,0.022980131,0.00003203777,0.0000071926133,8.2013327e-7,0.00033901597,0.000020561469,0.97451884,0.000010643763,0.00073504663,0.0012714235],"study_design_scores_gemma":[0.0008246623,0.00006173311,0.31848174,0.000098205746,0.000022636272,0.0000042163624,0.00010514025,0.0006453547,0.6795009,0.000024972967,0.00020031036,0.000030141433],"about_ca_topic_score_codex":0.00018839761,"about_ca_topic_score_gemma":0.000018647905,"teacher_disagreement_score":0.29550162,"about_ca_system_score_codex":0.000009112951,"about_ca_system_score_gemma":0.000018836054,"threshold_uncertainty_score":0.15255001},"labels":[],"label_agreement":null},{"id":"W2761834263","doi":"10.1016/j.gene.2017.10.008","title":"Molecular cloning and characterization of secretory carbonic anhydrase VI in pufferfish ( Takifugu rubripes )","year":2017,"lang":"en","type":"article","venue":"Gene","topic":"Enzyme function and inhibition","field":"Biochemistry, Genetics and Molecular Biology","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ontario Genomics; University of Ottawa","funders":"","keywords":"Takifugu rubripes; Biology; Peptide sequence; Fugu; Carbonic anhydrase; Complementary DNA; Amino acid; Biochemistry; Signal peptide; Sequence alignment; Open reading frame; Sequence analysis; Molecular cloning; Molecular biology; Genetics; Gene; Zebrafish; Enzyme","score_opus":0.006861930422635257,"score_gpt":0.2228170539333905,"score_spread":0.21595512351075524,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2761834263","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.998258,0.00020952847,0.00040779603,0.00007913731,0.00008749367,0.00007600958,0.000012874715,0.00000450229,0.0008646586],"genre_scores_gemma":[0.9991855,0.00017262272,0.000079267294,0.00014423183,0.00008443111,0.000007538566,0.00018324725,0.0000095490805,0.00013359128],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99952763,0.000024929474,0.00012019709,0.00017357538,0.000055177305,0.000098509634],"domain_scores_gemma":[0.99957633,0.0000014587545,0.00010544019,0.00024828615,0.000035035977,0.000033459844],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009459326,0.00007143696,0.00008364602,0.000033752178,0.000056723988,0.000021155534,0.000063039646,0.00008916159,0.000010672635],"category_scores_gemma":[0.00004474912,0.000077999604,0.000025363533,0.00001956329,0.000052332896,0.000007644498,0.000054705262,0.000042469645,8.5105466e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000025345473,0.000014941443,0.0059322775,0.00001249993,0.000006683474,0.0000030618223,0.000021694208,0.0000076438555,0.9932555,0.00003656341,0.000024297799,0.00065951835],"study_design_scores_gemma":[0.0003708927,0.00007881233,0.05479843,0.000022236092,0.000005229933,0.000004776219,0.000008286739,0.00012856688,0.94337505,0.00001475145,0.0011115475,0.0000814179],"about_ca_topic_score_codex":0.0000337243,"about_ca_topic_score_gemma":0.000031457308,"teacher_disagreement_score":0.049880423,"about_ca_system_score_codex":0.0000065914055,"about_ca_system_score_gemma":0.000023283255,"threshold_uncertainty_score":0.31807315},"labels":[],"label_agreement":null},{"id":"W2762528437","doi":"10.1016/j.gene.2017.10.003","title":"Uncharacterized ORF HUR1 influences the efficiency of non-homologous end-joining repair in Saccharomyces cerevisiae","year":2017,"lang":"en","type":"article","venue":"Gene","topic":"Fungal and yeast genetics research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":25,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Agriculture and Agri-Food Canada; Université de Montréal; Hôpital Maisonneuve-Rosemont; University of Regina; Carleton University; University of Ottawa","funders":"","keywords":"Biology; Homologous recombination; Non-homologous end joining; Plasmid; Saccharomyces cerevisiae; DNA repair; DNA; Homologous chromosome; Genetics; Mutant; Molecular biology; Gene","score_opus":0.01700969179131228,"score_gpt":0.3034078224841038,"score_spread":0.2863981306927915,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2762528437","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.997183,0.001101267,0.00003209524,0.0002649358,0.00012393734,0.00018612828,0.000030393207,0.000006175495,0.0010720551],"genre_scores_gemma":[0.9983637,0.00054035976,0.00040381672,0.00009222555,0.00014958103,0.000024027224,0.000017823342,0.00001188846,0.00039661708],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9988674,0.000072752526,0.0002579977,0.00031113488,0.00019406449,0.00029666466],"domain_scores_gemma":[0.99891335,0.00002136766,0.00016265736,0.00076433,0.00008578716,0.00005252644],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00050652376,0.00012922316,0.00018337983,0.00004410801,0.00020461738,0.000035103127,0.00068108964,0.00010690614,0.000045081466],"category_scores_gemma":[0.0002231808,0.000089996814,0.00010143334,0.00006660072,0.00026146235,0.000005006684,0.0003818195,0.000118843585,0.000014190075],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000069941445,0.00003893504,0.024943724,0.000024007762,0.000023309427,0.00000832059,0.00009262353,0.000021402187,0.9710689,0.000007173774,0.000107594766,0.0035940707],"study_design_scores_gemma":[0.00043325184,0.0002557187,0.15485337,0.000027192644,0.0000071984437,0.000012243692,0.000046887497,0.00012160568,0.84169364,0.000032832744,0.0023940005,0.00012203463],"about_ca_topic_score_codex":0.00014222236,"about_ca_topic_score_gemma":0.00005158024,"teacher_disagreement_score":0.12990965,"about_ca_system_score_codex":0.000007138873,"about_ca_system_score_gemma":0.00011567529,"threshold_uncertainty_score":0.36699635},"labels":[],"label_agreement":null},{"id":"W2766056404","doi":"10.1016/j.gene.2017.10.044","title":"CRELD1 gene variants and atrioventricular septal defects in Down syndrome","year":2017,"lang":"en","type":"article","venue":"Gene","topic":"Cardiac Structural Anomalies and Repair","field":"Medicine","cited_by":29,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Department of Science and Technology, Government of Kerala; Ministry of Health, British Columbia","keywords":"Biology; Atrioventricular Septal Defect; Gene; Genetics; NFAT; Down syndrome; Calcineurin; Transcription factor; Internal medicine; Heart disease; Medicine","score_opus":0.007941320752578815,"score_gpt":0.23864886916633632,"score_spread":0.2307075484137575,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2766056404","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99487925,0.0029895576,0.0000061472765,0.00033280803,0.00031527813,0.0002109182,0.000011835782,0.00002232049,0.0012318736],"genre_scores_gemma":[0.99817836,0.00029706844,0.00043853305,0.000109389715,0.00017891797,0.0000048795337,0.0000117606405,0.000010650269,0.0007704645],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9992824,0.000013355858,0.0001296175,0.00022639264,0.00013224462,0.00021598891],"domain_scores_gemma":[0.99943507,0.0000112673415,0.00005644079,0.00035775042,0.000021404483,0.00011807213],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009014374,0.00011058971,0.00027020727,0.000050734197,0.0001392782,0.00003758833,0.00006380192,0.00008693008,0.0000775424],"category_scores_gemma":[0.000050297796,0.00008146473,0.00016541539,0.00004438173,0.000056239205,0.000054284592,0.00011716999,0.00009357589,0.000022509592],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00038156763,0.00015254787,0.7544048,0.00039470848,0.00078390783,0.034142982,0.00040218452,0.000039812916,0.17836691,0.00029346687,0.0015496486,0.029087503],"study_design_scores_gemma":[0.001400008,0.000115984076,0.98719114,0.000037875074,0.00009242708,0.0048710825,0.000012614093,0.000046706642,0.0045601735,0.000094927535,0.0014588486,0.000118204836],"about_ca_topic_score_codex":0.00021205079,"about_ca_topic_score_gemma":0.000015529775,"teacher_disagreement_score":0.23278639,"about_ca_system_score_codex":0.000030035735,"about_ca_system_score_gemma":0.000026416765,"threshold_uncertainty_score":0.33220354},"labels":[],"label_agreement":null},{"id":"W2770561499","doi":"10.1016/j.gene.2017.11.040","title":"The FTO variant is associated with chronic complications of diabetes mellitus in Czech population","year":2017,"lang":"en","type":"article","venue":"Gene","topic":"Genetic Associations and Epidemiology","field":"Biochemistry, Genetics and Molecular Biology","cited_by":28,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Ministry of Health, British Columbia","keywords":"Diabetes mellitus; Genotype; Biology; Single-nucleotide polymorphism; Internal medicine; SNP; Nephropathy; Population; Diabetic nephropathy; Type 2 Diabetes Mellitus; Logistic regression; Genetic association; Endocrinology; Medicine; Gastroenterology; Gene; Genetics","score_opus":0.014722335458401882,"score_gpt":0.26616175638925893,"score_spread":0.251439420930857,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2770561499","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99713445,0.00091261003,0.00036682514,0.0010633804,0.000046139383,0.0001294875,0.000025887251,0.000002843805,0.00031839727],"genre_scores_gemma":[0.9989243,0.00024424226,0.00037331608,0.00007616043,0.000043947148,0.000030059591,0.00014023005,0.0000076227884,0.0001601056],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9993468,0.00006555805,0.00018824788,0.00016109024,0.000057852732,0.00018043832],"domain_scores_gemma":[0.9991101,0.000035083598,0.00025678484,0.0004939232,0.00008121391,0.00002288768],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00033263,0.00006901802,0.00012001739,0.0000148970585,0.000262957,0.000017072187,0.00021548617,0.00009704744,0.000004038214],"category_scores_gemma":[0.00026580712,0.000050398794,0.00003432948,0.000035583515,0.000074060204,0.0000020289363,0.00006129903,0.00004436065,0.0000023346856],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000010478426,0.000068730566,0.9022784,0.000005641623,0.00014983497,3.9827836e-7,0.00006143284,0.0006060263,0.089441955,0.00024392757,0.0008034448,0.00632969],"study_design_scores_gemma":[0.0002959779,0.000093465314,0.98734903,0.000008855891,0.000013518245,5.609132e-7,0.0000090849,0.0006506604,0.00987214,0.0005232842,0.0011154636,0.00006794571],"about_ca_topic_score_codex":0.00018949101,"about_ca_topic_score_gemma":0.0012374191,"teacher_disagreement_score":0.0850706,"about_ca_system_score_codex":0.00003075283,"about_ca_system_score_gemma":0.000048111524,"threshold_uncertainty_score":0.20552032},"labels":[],"label_agreement":null},{"id":"W2777586898","doi":"10.1016/j.gene.2017.12.034","title":"Association between FASN gene polymorphisms ultrasound carcass traits and intramuscular fat in Qinchuan cattle","year":2017,"lang":"en","type":"article","venue":"Gene","topic":"Genetic and phenotypic traits in livestock","field":"Biochemistry, Genetics and Molecular Biology","cited_by":56,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University","funders":"National Eye Institute; National Key Research and Development Program of China; Key Technologies Research and Development Program","keywords":"Intramuscular fat; Biology; Single-nucleotide polymorphism; Fatty acid synthase; Genotype; SNP; Genetics; Gene; Animal science","score_opus":0.011964150579066789,"score_gpt":0.24043381813605189,"score_spread":0.22846966755698508,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2777586898","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99597514,0.0010105325,0.0016344249,0.0002846736,0.00015659764,0.00018556911,0.00009261767,0.0000088754605,0.0006515921],"genre_scores_gemma":[0.992547,0.00011670308,0.0056223106,0.00008969646,0.0006408523,0.000016812835,0.0001191231,0.000024295157,0.00082325423],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99884,0.000059665228,0.00020978671,0.00039823304,0.00015656058,0.00033580445],"domain_scores_gemma":[0.9993039,0.000024450052,0.0001486614,0.0003594405,0.000047987818,0.00011556864],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00021551318,0.00017856297,0.00019910543,0.000035664303,0.0002069897,0.00007535361,0.0002948576,0.00026783696,0.000018663748],"category_scores_gemma":[0.00016856393,0.00018615629,0.000058464713,0.00003112708,0.00009242894,0.000006827896,0.000110445435,0.000120784076,0.00000907522],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000020519356,0.00004462778,0.24066465,0.000011762456,0.00015902492,0.0000017389175,0.0002499952,0.000112333466,0.7465126,0.00014737104,0.0005857978,0.011489588],"study_design_scores_gemma":[0.00059512275,0.00011230362,0.81140846,0.0000057193624,0.000042181066,0.000006579945,0.00001731221,0.0000018697849,0.18530667,0.0006445661,0.001659415,0.0001998043],"about_ca_topic_score_codex":0.00015426721,"about_ca_topic_score_gemma":0.00020385407,"teacher_disagreement_score":0.5707438,"about_ca_system_score_codex":0.000039553473,"about_ca_system_score_gemma":0.00004821371,"threshold_uncertainty_score":0.7591233},"labels":[],"label_agreement":null},{"id":"W2779260684","doi":"10.1016/j.gene.2017.12.042","title":"Two mulberry phytochelatin synthase genes confer zinc/cadmium tolerance and accumulation in transgenic Arabidopsis and tobacco","year":2017,"lang":"en","type":"article","venue":"Gene","topic":"Plant Stress Responses and Tolerance","field":"Agricultural and Biological Sciences","cited_by":81,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ministry of Agriculture","funders":"","keywords":"Arabidopsis; Biology; Phytochelatin; Transgene; Gene; Genetically modified crops; Cadmium; Shoot; Botany; Enzyme; Biochemistry; Glutathione; Chemistry","score_opus":0.044756675628499915,"score_gpt":0.2852847362590813,"score_spread":0.24052806063058138,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2779260684","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99719363,0.0013640163,0.000005585422,0.00085123803,0.000063770145,0.00015800355,0.000081591475,0.000015162632,0.00026701897],"genre_scores_gemma":[0.99867666,0.0007901842,0.00013185196,0.00009411041,0.0001344648,0.000014874606,0.000015928586,9.692085e-7,0.00014096619],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9992455,0.000039109338,0.00014724869,0.0002812633,0.00009011056,0.00019675487],"domain_scores_gemma":[0.9996526,0.000095251606,0.00007726029,0.000082342274,0.000018612765,0.00007391451],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00010060793,0.00012218636,0.00017197346,0.000009965728,0.00023635344,0.00011863482,0.000130128,0.00006686957,0.00005717213],"category_scores_gemma":[0.0000282326,0.00005723591,0.00003092931,0.000040912553,0.00007352252,0.00018440945,0.000043348256,0.00007005489,0.0000049269543],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00018905374,0.00003355476,0.16757378,0.000007680788,0.000007873889,0.000013713672,0.00006613583,0.000058183734,0.5949699,0.000049120412,0.000013902964,0.23701707],"study_design_scores_gemma":[0.00047301117,0.00004856868,0.9729752,0.000033652097,0.0000068267245,0.000011045313,0.000021997343,0.001187935,0.02318766,0.000102063124,0.0017874517,0.00016457772],"about_ca_topic_score_codex":0.0005736671,"about_ca_topic_score_gemma":0.0028642805,"teacher_disagreement_score":0.80540144,"about_ca_system_score_codex":0.000006149232,"about_ca_system_score_gemma":0.000005003768,"threshold_uncertainty_score":0.23340127},"labels":[],"label_agreement":null},{"id":"W2782145486","doi":"10.1016/j.gene.2018.01.001","title":"Gene expression profiling provides insights into the immune mechanism of Plutella xylostella midgut to microbial infection","year":2018,"lang":"en","type":"article","venue":"Gene","topic":"Invertebrate Immune Response Mechanisms","field":"Immunology and Microbiology","cited_by":30,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Brock University","funders":"National Natural Science Foundation of China","keywords":"Biology; Diamondback moth; Plutella; Midgut; Immune system; Microbiology; Innate immune system; Prophenoloxidase; Effector; Immunity; Genetics; Immunology; Botany; Larva","score_opus":0.011617661688320898,"score_gpt":0.23024789929597322,"score_spread":0.21863023760765232,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2782145486","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98738635,0.0022277818,0.00666338,0.00014413203,0.002341666,0.0009301877,0.0000072174266,0.00009181889,0.000207486],"genre_scores_gemma":[0.9945087,0.000113092305,0.0035364553,0.0002273901,0.00016849044,0.00006464383,0.00005702312,0.000045653196,0.0012785553],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9979727,0.0005206062,0.00054906483,0.0004448262,0.000079091005,0.0004336718],"domain_scores_gemma":[0.9986717,0.00007590214,0.00024347942,0.00071054534,0.00026699342,0.000031395622],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00051398086,0.000289997,0.00036982715,0.00023740795,0.0005163784,0.000024702817,0.00042320497,0.0003630986,0.00026035335],"category_scores_gemma":[0.00011692975,0.00020863564,0.00013669234,0.00032537218,0.00023383585,0.00009228681,0.00041331287,0.00025619063,0.0012233165],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005717945,0.0000828256,0.000012938921,0.000024817462,0.00009376781,0.0000025700028,0.0036067602,0.000007363042,0.99168473,0.00076631526,0.00021686824,0.002929216],"study_design_scores_gemma":[0.0007310711,0.0006606704,0.000053715805,0.00007649455,0.000043364747,0.000062725936,0.00014613429,0.000021929683,0.9943145,0.0008315211,0.0028137397,0.00024414287],"about_ca_topic_score_codex":0.00042355034,"about_ca_topic_score_gemma":0.000060872702,"teacher_disagreement_score":0.0071223667,"about_ca_system_score_codex":0.00008280876,"about_ca_system_score_gemma":0.00014183001,"threshold_uncertainty_score":0.99955434},"labels":[],"label_agreement":null},{"id":"W2783282654","doi":"10.1016/j.gene.2018.01.030","title":"Polymerase epsilon mutations and concomitant β2-microglobulin mutations in cancer","year":2018,"lang":"en","type":"article","venue":"Gene","topic":"Genetic factors in colorectal cancer","field":"Medicine","cited_by":15,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Sault Area Hospital; NOSM University","funders":"","keywords":"Biology; Mutation; Proofreading; Exonuclease; Genetics; Microsatellite instability; Genome instability; Point mutation; DNA polymerase; Mutation rate; Polymerase; DNA mismatch repair; Gene; Cancer research; Molecular biology; DNA repair; DNA; Microsatellite; DNA damage","score_opus":0.025444663011713914,"score_gpt":0.32321741057898523,"score_spread":0.29777274756727135,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2783282654","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9944217,0.0016530757,0.0001223149,0.0019101714,0.0003543353,0.00031572967,0.00005525228,0.00002954779,0.0011378536],"genre_scores_gemma":[0.99420613,0.00011527715,0.004219495,0.0006800556,0.00016379605,0.00007700439,0.000024705065,0.00001806867,0.00049546733],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99921614,0.000024273148,0.00020087836,0.00023092907,0.00012122079,0.00020658676],"domain_scores_gemma":[0.9995361,0.00005128675,0.000043211865,0.00016343429,0.000092435344,0.00011354681],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00006024431,0.00010727538,0.00016772162,0.00010562382,0.00006810766,0.000012146065,0.000043123382,0.00006783917,0.00053052796],"category_scores_gemma":[0.000069441594,0.00010204842,0.000026134401,0.00023741093,0.00021026647,0.000028842303,0.000029417966,0.00010034899,0.000047839774],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00025417333,0.00015920428,0.12911215,0.00004541936,0.00007729837,0.000086067885,0.0031263113,0.000043471853,0.83965534,0.000058313497,0.0015231981,0.02585905],"study_design_scores_gemma":[0.0028457115,0.0005330573,0.25054887,0.00009284033,0.0001245455,0.00016232561,0.00038866044,0.0008795304,0.74050605,0.00030786128,0.0033572167,0.00025333706],"about_ca_topic_score_codex":0.0007108007,"about_ca_topic_score_gemma":0.0014388305,"teacher_disagreement_score":0.12143672,"about_ca_system_score_codex":0.0001338476,"about_ca_system_score_gemma":0.00021644057,"threshold_uncertainty_score":0.58089095},"labels":[],"label_agreement":null},{"id":"W2790280998","doi":"10.1016/j.gene.2018.01.086","title":"Dynamic regulation of six histone H3 lysine (K) methyltransferases in response to prolonged anoxia exposure in a freshwater turtle","year":2018,"lang":"en","type":"article","venue":"Gene","topic":"Epigenetics and DNA Methylation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":41,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Carleton University","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Histone methyltransferase; Biology; Histone; Histone H3; Histone methylation; EZH2; Methyltransferase; Methylation; Lysine; Regulation of gene expression; Epigenetics; Biochemistry; Gene expression; Cell biology; DNA methylation; Gene; Amino acid","score_opus":0.007926286464025108,"score_gpt":0.27160732093153767,"score_spread":0.26368103446751257,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2790280998","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.996716,0.0009176491,0.001694434,0.00025642425,0.00007603156,0.00026078688,0.000028216074,0.000004677428,0.000045781006],"genre_scores_gemma":[0.9939956,0.00004558022,0.005417161,0.000049987888,0.00005004912,0.00002528869,0.00011196868,0.000017017068,0.00028735006],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.998982,0.00016990681,0.00028891978,0.00027856912,0.000108286775,0.000172296],"domain_scores_gemma":[0.9995073,0.000015935977,0.000046590223,0.00029334033,0.00009492921,0.00004186682],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004994153,0.00010842963,0.00015252153,0.00016860383,0.00001996133,0.000005628711,0.00009458736,0.00013208468,0.00003558921],"category_scores_gemma":[0.00012371589,0.00010715712,0.00003747923,0.0002188751,0.000049912927,0.0000035150324,0.00003387598,0.000044397155,0.0000055768883],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0012481043,0.00006466213,0.0054169935,0.00000870421,0.000008168346,0.0000016339043,0.00031454483,0.00047529832,0.99077994,0.0000018528206,0.000023757397,0.0016563241],"study_design_scores_gemma":[0.0006011568,0.0006347642,0.14854528,0.000013382727,0.000005703889,7.472201e-7,0.000013158085,0.00021556343,0.8479726,0.00008665017,0.0018048252,0.00010618772],"about_ca_topic_score_codex":0.00007813577,"about_ca_topic_score_gemma":0.00447647,"teacher_disagreement_score":0.14312829,"about_ca_system_score_codex":0.000032435797,"about_ca_system_score_gemma":0.000048061407,"threshold_uncertainty_score":0.43697402},"labels":[],"label_agreement":null},{"id":"W2791065031","doi":"10.1016/j.gene.2018.03.031","title":"The matrices and constraints of GT/AG splice sites of more than 1000 species/lineages","year":2018,"lang":"en","type":"article","venue":"Gene","topic":"RNA Research and Splicing","field":"Biochemistry, Genetics and Molecular Biology","cited_by":14,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Winnipeg; University of Manitoba","funders":"Natural Sciences and Engineering Research Council of Canada; Canada Research Chairs; Research Manitoba","keywords":"Biology; splice; Evolutionary biology; Genetics; Computational biology; Gene","score_opus":0.012609738198795612,"score_gpt":0.27563422062184495,"score_spread":0.2630244824230493,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2791065031","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99538565,0.0024868448,0.00008890913,0.00014236127,0.000021234604,0.00007020947,0.000030116613,0.0000020492348,0.001772604],"genre_scores_gemma":[0.9962511,0.0016421624,0.00040548143,0.00002626357,0.00015824247,0.0000018175352,0.000011996427,0.0000048583497,0.001498051],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.999481,0.000021919494,0.00012187706,0.00012301205,0.00010972147,0.00014244499],"domain_scores_gemma":[0.9995496,0.00002464777,0.00006149967,0.00020166123,0.00012044346,0.000042095882],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00017966235,0.00005968914,0.00008519284,0.000018286159,0.00006509907,0.0000082962015,0.0001366301,0.00004916105,0.000021564194],"category_scores_gemma":[0.00005601594,0.000040476483,0.000031700616,0.000052317195,0.0005812817,0.0000015621199,0.00009588074,0.000031283198,0.0000021355186],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00004368791,0.000009735405,0.0052373223,0.0000150220385,0.000030553972,6.763804e-7,0.000041850155,6.7911725e-7,0.99110985,0.00006714049,0.00071556814,0.0027279153],"study_design_scores_gemma":[0.00016899423,0.00020127343,0.0119480565,0.0000068142926,0.0000060603093,0.000007018014,0.00022187424,0.000030789524,0.98334366,0.000014028749,0.0040060137,0.000045408673],"about_ca_topic_score_codex":0.000028254657,"about_ca_topic_score_gemma":0.000053799537,"teacher_disagreement_score":0.0077661807,"about_ca_system_score_codex":0.0000018295414,"about_ca_system_score_gemma":0.0000332536,"threshold_uncertainty_score":0.21417567},"labels":[],"label_agreement":null},{"id":"W2792999068","doi":"10.1016/j.gene.2018.02.059","title":"Polymorphism in promoter of SIX4 gene shows association with its transcription and body measurement traits in Qinchuan cattle","year":2018,"lang":"en","type":"article","venue":"Gene","topic":"Genetic and phenotypic traits in livestock","field":"Biochemistry, Genetics and Molecular Biology","cited_by":26,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University","funders":"","keywords":"Biology; Genetics; Haplotype; Single-nucleotide polymorphism; Homeobox; Gene; Promoter; Transcription factor; Withers; HNF1B; Genotype; Parochialism; Gene expression; Endocrinology","score_opus":0.014786582306840873,"score_gpt":0.21618743293992154,"score_spread":0.20140085063308066,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2792999068","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99696255,0.00080266583,0.0014482527,0.00015495156,0.00006697861,0.00025444076,0.000018973276,0.0000035997548,0.00028758871],"genre_scores_gemma":[0.9960485,0.000023135242,0.0034942643,0.00006316316,0.00012734828,0.000020234604,0.000019763216,0.000012691275,0.00019087191],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99913675,0.00005490384,0.00019433953,0.0002465696,0.00018239582,0.00018503529],"domain_scores_gemma":[0.9996703,0.0000028737943,0.0000709077,0.00011117565,0.00010396748,0.000040749128],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00027246043,0.00010966402,0.00012922351,0.000048749043,0.00002105096,0.0000060312573,0.000072451854,0.0001286778,0.000016902486],"category_scores_gemma":[0.000022078631,0.0001012159,0.000019930387,0.00007626818,0.000040721785,0.000003912936,0.00001567834,0.000055545606,0.0000017357514],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000101165475,0.00009267013,0.0068560713,0.000015596344,0.000024177636,2.8036376e-7,0.00042995278,0.00004893739,0.9903111,0.000039575938,0.00005757161,0.0020228925],"study_design_scores_gemma":[0.0008224952,0.0005167371,0.36737746,0.000015593498,0.000012638087,0.0000037091188,0.00001840944,0.000014036525,0.6307921,0.00008127946,0.00024992356,0.00009560816],"about_ca_topic_score_codex":0.000036872403,"about_ca_topic_score_gemma":0.0006702486,"teacher_disagreement_score":0.36052138,"about_ca_system_score_codex":0.00004060992,"about_ca_system_score_gemma":0.00006884128,"threshold_uncertainty_score":0.41274643},"labels":[],"label_agreement":null},{"id":"W2793719499","doi":"10.1016/j.gene.2018.03.012","title":"The study of the calpain and caspase-1 expression in ultrastructural dynamics of Ehrlich ascites carcinoma necrosis","year":2018,"lang":"en","type":"article","venue":"Gene","topic":"Calpain Protease Function and Regulation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":12,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Ottawa","funders":"","keywords":"Calpain; Biology; Secretion; Cell biology; Intracellular; Cytoplasm; Programmed cell death; Apoptosis; Caspase; Molecular biology; Biochemistry; Enzyme","score_opus":0.004922580013965182,"score_gpt":0.21653343169923459,"score_spread":0.2116108516852694,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2793719499","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99930686,0.00013950064,0.0001134959,0.00008480568,0.00010263571,0.00022025395,0.000007431685,0.0000013567251,0.000023664605],"genre_scores_gemma":[0.999702,0.000009833285,0.00006093229,0.000017006334,0.00005204311,0.0000076603055,0.000009233782,0.000004661258,0.00013668265],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99950427,0.000091063484,0.00013607183,0.000116305215,0.000078754536,0.000073559226],"domain_scores_gemma":[0.9996316,0.000014293571,0.000070585666,0.00020992808,0.00005713718,0.000016464646],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014829576,0.00005605595,0.00006194416,0.000015063281,0.00008687693,0.0000058119217,0.00007887937,0.000048815677,0.0000034036152],"category_scores_gemma":[0.00005062591,0.00003098073,0.000024282777,0.00007630133,0.00013274261,0.0000014212958,0.00007163333,0.000032027252,9.146996e-8],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007327906,0.000028614319,0.09590917,0.000004972063,0.0000073080855,9.030642e-8,0.0002476898,0.00003500996,0.90137386,0.0000069632915,0.00008606475,0.0022269965],"study_design_scores_gemma":[0.00039511427,0.00020864834,0.3563408,0.0000053768067,0.000006114948,0.0000032287069,0.00055963796,0.00091625855,0.641376,0.000042689146,0.00010857141,0.00003755958],"about_ca_topic_score_codex":0.00013115151,"about_ca_topic_score_gemma":0.001102211,"teacher_disagreement_score":0.26043162,"about_ca_system_score_codex":0.000007504004,"about_ca_system_score_gemma":0.000017451674,"threshold_uncertainty_score":0.12633574},"labels":[],"label_agreement":null},{"id":"W2794277786","doi":"10.1016/j.gene.2018.03.023","title":"Association between serotonin 2A receptor genetic variations, stressful life events and suicide","year":2018,"lang":"en","type":"article","venue":"Gene","topic":"Neurotransmitter Receptor Influence on Behavior","field":"Neuroscience","cited_by":22,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"Genotype; Biology; Allele; Restriction fragment length polymorphism; Genetics; Allele frequency; Internal medicine; Gene; Medicine","score_opus":0.036028653784239056,"score_gpt":0.2929936826270409,"score_spread":0.2569650288428018,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2794277786","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99733174,0.000025734636,0.00029547937,0.0010957378,0.00041539714,0.00051107723,0.00012646949,0.00011340733,0.00008497526],"genre_scores_gemma":[0.99592334,0.00006104741,0.0017859377,0.0010030292,0.00043856003,0.000073863994,0.000008209554,0.000036000467,0.00067002274],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9980476,0.00024588787,0.00032745185,0.00052544783,0.00046336488,0.0003902685],"domain_scores_gemma":[0.999074,0.00014930131,0.00019424394,0.00030381716,0.000077197954,0.0002014801],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00019055765,0.00017935083,0.00018683389,0.000097992575,0.00023353306,0.00007631938,0.0002756132,0.00011886004,0.00053629896],"category_scores_gemma":[0.0004271043,0.00018951588,0.000043699274,0.0002900086,0.000067049325,0.00020900813,0.00007438714,0.00016118806,0.00077445933],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000007471932,0.00002754484,0.46053585,0.000005093383,0.00000725083,0.000001364334,0.0001343701,0.0000017086495,0.5358141,0.000011423296,0.00044717264,0.003006657],"study_design_scores_gemma":[0.00035391492,0.00009792778,0.3659977,0.00001173975,0.0000391403,0.0000024440462,0.0000037536622,0.000019000336,0.6311398,0.00012894222,0.002039641,0.00016598307],"about_ca_topic_score_codex":0.00004678586,"about_ca_topic_score_gemma":0.000008826019,"teacher_disagreement_score":0.09532572,"about_ca_system_score_codex":0.00009570976,"about_ca_system_score_gemma":0.000059216964,"threshold_uncertainty_score":0.9954366},"labels":[],"label_agreement":null},{"id":"W2800338925","doi":"10.1016/j.gene.2018.04.068","title":"Molecular and functional characterization of the magnesium transporter gene ZmMGT12 in maize","year":2018,"lang":"en","type":"article","venue":"Gene","topic":"Magnesium in Health and Disease","field":"Nursing","cited_by":29,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ministry of Agriculture","funders":"National Natural Science Foundation of China","keywords":"Biology; Arabidopsis; Complementation; Chloroplast; Mutant; Shoot; Gene; Transporter; Chlorophyll; Biochemistry; Botany; Cell biology","score_opus":0.009883031019768947,"score_gpt":0.22117266175724065,"score_spread":0.2112896307374717,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2800338925","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99704653,0.000107994725,0.00046027038,0.0012662759,0.0006447952,0.0001941351,0.000031813383,0.000010814135,0.00023739146],"genre_scores_gemma":[0.9981556,0.0000013171514,0.00010417403,0.0014124706,0.00019865371,0.000011984939,0.00003606375,0.000009538658,0.00007021767],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9993647,0.000042098247,0.00017821489,0.00014385759,0.00012504395,0.00014612908],"domain_scores_gemma":[0.9996669,0.0000060521556,0.00005257757,0.00016334132,0.000046752364,0.000064356645],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00008512465,0.000069032845,0.00007933589,0.000043489854,0.00004934498,0.000006214349,0.000047087327,0.000047342848,0.00024508525],"category_scores_gemma":[0.000011007074,0.00005596655,0.00002587773,0.00013009713,0.00006944763,0.000046512698,0.000010138626,0.00004045117,0.000006810074],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003272305,0.000044688637,0.040275898,0.00012826246,8.981576e-7,0.0000022837555,0.00016258427,0.000003264362,0.9565028,0.000031939257,0.000016672971,0.0025034833],"study_design_scores_gemma":[0.00041596548,0.000051879386,0.6849843,0.000003461074,0.000017789203,0.00000394781,0.0000043851296,0.00019103293,0.31394458,0.00011980105,0.00021008491,0.00005275082],"about_ca_topic_score_codex":0.000037812537,"about_ca_topic_score_gemma":0.000015805643,"teacher_disagreement_score":0.6447084,"about_ca_system_score_codex":0.00001267464,"about_ca_system_score_gemma":0.000029126963,"threshold_uncertainty_score":0.26835117},"labels":[],"label_agreement":null},{"id":"W2885296181","doi":"10.1016/j.gene.2018.08.014","title":"Identification of novel and conserved microRNA and their expression in the gray mouse lemur, Microcebus murinus, a primate capable of daily torpor","year":2018,"lang":"en","type":"article","venue":"Gene","topic":"MicroRNA in disease regulation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":20,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Carleton University","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Biology; Torpor; microRNA; Lemur; In silico; Genetics; Conserved sequence; Computational biology; Gene; Primate","score_opus":0.01149006283103933,"score_gpt":0.23743865213110776,"score_spread":0.22594858930006845,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2885296181","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99737895,0.0014649321,0.0008074045,0.00003508433,0.000019833258,0.00020080939,0.00007650997,0.0000023477053,0.000014152126],"genre_scores_gemma":[0.9988087,0.00011801572,0.0008843514,0.000034259545,0.000031399548,0.000009396583,0.000056227593,0.0000085805195,0.000049090293],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9994266,0.000037770496,0.00021853582,0.00018162289,0.00004691433,0.000088544424],"domain_scores_gemma":[0.9994677,0.000008495625,0.0001640026,0.00025663283,0.00008164733,0.000021553375],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00021055399,0.00008204753,0.00009728007,0.000030773866,0.000032302712,0.000010299303,0.00009919837,0.00006531625,0.0000027094109],"category_scores_gemma":[0.000023539005,0.00006009759,0.000021889015,0.000048780257,0.00015727732,0.00000466769,0.000062631305,0.000021667167,3.245308e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007241558,0.000065505825,0.0015946932,0.000054196946,0.000010616765,1.2090656e-7,0.00030498102,0.0000026662885,0.9975197,0.0000045605816,0.00020995003,0.00016059748],"study_design_scores_gemma":[0.00056269055,0.00004978235,0.015489623,0.00001821283,0.0000084124085,0.000009968521,0.00010441785,0.000060808787,0.9832691,0.000021550002,0.0003436827,0.000061729115],"about_ca_topic_score_codex":0.00003548485,"about_ca_topic_score_gemma":0.000035456753,"teacher_disagreement_score":0.014250573,"about_ca_system_score_codex":0.0000046885134,"about_ca_system_score_gemma":0.000027197966,"threshold_uncertainty_score":0.24507086},"labels":[],"label_agreement":null},{"id":"W2888420880","doi":"10.1016/j.gene.2018.08.066","title":"Identification of essential yeast genes involved in polyamine resistance","year":2018,"lang":"en","type":"article","venue":"Gene","topic":"Polyamine Metabolism and Applications","field":"Biochemistry, Genetics and Molecular Biology","cited_by":6,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hôpital Maisonneuve-Rosemont; Université de Montréal","funders":"Canadian Institutes of Health Research","keywords":"Biology; Polyamine; Spermidine; Spermine; Biochemistry; Gene; DNA; Saccharomyces cerevisiae; RNA; Mutant; DNA damage; Molecular biology; Cell biology; Enzyme","score_opus":0.007394076718286252,"score_gpt":0.2526244842103646,"score_spread":0.24523040749207833,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2888420880","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99412304,0.0015894683,0.0036718748,0.0000809362,0.00009271919,0.00008937676,0.0000499541,0.000004504533,0.00029813932],"genre_scores_gemma":[0.9973376,0.00016823455,0.0006843862,0.0000348018,0.00037777264,0.000020949114,0.000102731225,0.000008384332,0.0012651664],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99942964,0.00001869169,0.00020087446,0.00018194616,0.000063231404,0.00010562334],"domain_scores_gemma":[0.9995174,0.0000017338804,0.00007978639,0.0003102922,0.00006599331,0.000024808007],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000096551375,0.000059981685,0.00007540923,0.00003899868,0.000026566495,0.000005459401,0.00013464027,0.000050157552,0.00000964728],"category_scores_gemma":[0.0000224753,0.00006259177,0.000026988188,0.00013171356,0.00009646555,0.0000022428808,0.000045026547,0.000018492943,0.000014236573],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000022287288,0.000038308255,0.0009639013,0.000005702981,0.000005843897,1.4057407e-7,0.000020647041,0.0000014008929,0.9974479,0.00022834488,0.00037341227,0.00089209183],"study_design_scores_gemma":[0.00020933102,0.000014092908,0.017216967,0.0000027707683,0.0000062755066,5.053969e-7,0.00002253373,0.000017488406,0.9719804,0.0001135261,0.010353365,0.00006275429],"about_ca_topic_score_codex":0.00001992071,"about_ca_topic_score_gemma":0.0003173896,"teacher_disagreement_score":0.02546753,"about_ca_system_score_codex":0.0000031391703,"about_ca_system_score_gemma":0.00002954067,"threshold_uncertainty_score":0.25524184},"labels":[],"label_agreement":null},{"id":"W2892749673","doi":"10.1016/j.gene.2018.09.043","title":"Investigating the genetic diversity and affinities of historical populations of Tibet","year":2018,"lang":"en","type":"article","venue":"Gene","topic":"Forensic and Genetic Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":8,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"MD Precision (Canada)","funders":"","keywords":"Haplogroup; Biology; Haplotype; Affinities; Evolutionary biology; Genetics; Genetic diversity; Y chromosome; Population genetics; Population; Single-nucleotide polymorphism; Allele; Gene; Genotype; Demography","score_opus":0.057107160410386826,"score_gpt":0.2775998832659997,"score_spread":0.2204927228556129,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2892749673","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9980899,0.0008210229,0.00045526138,0.00011937641,0.000057317557,0.000049973307,0.00000658627,0.0000013025603,0.00039925252],"genre_scores_gemma":[0.99601215,0.00005793691,0.003449498,0.000036342255,0.00010480342,0.000001143859,0.000005890246,0.0000032990283,0.00032891252],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99960566,0.00003070353,0.000098729535,0.00009144927,0.00009443152,0.00007904439],"domain_scores_gemma":[0.9996696,0.000008545178,0.000044179673,0.00016002303,0.000088850036,0.000028818651],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000091937894,0.000040538456,0.000062654915,0.00001556145,0.00016129565,0.0000019176646,0.000093627285,0.00003833954,0.000009009296],"category_scores_gemma":[0.00006687305,0.00003048939,0.000022578057,0.00004619449,0.0003533581,7.159362e-7,0.00036431436,0.000024198043,6.682259e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000024713183,0.000029150027,0.2617995,0.000033539087,0.00004831608,4.0008055e-7,0.0013628345,0.000037390462,0.72368443,0.00045675432,0.006044478,0.0064784535],"study_design_scores_gemma":[0.00030927052,0.0006189049,0.38033098,0.000009353454,0.000029819166,0.000009352655,0.0002130508,0.00019118625,0.6130952,0.0019333647,0.0031496594,0.00010982835],"about_ca_topic_score_codex":0.00021071926,"about_ca_topic_score_gemma":0.00006113956,"teacher_disagreement_score":0.11853146,"about_ca_system_score_codex":0.000005412365,"about_ca_system_score_gemma":0.000024555513,"threshold_uncertainty_score":0.13019626},"labels":[],"label_agreement":null},{"id":"W2898407871","doi":"10.1016/j.gene.2018.10.061","title":"Both male and female gamete generating cells produce processed pseudogenes in the human genome","year":2018,"lang":"en","type":"article","venue":"Gene","topic":"Genetic and Clinical Aspects of Sex Determination and Chromosomal Abnormalities","field":"Biochemistry, Genetics and Molecular Biology","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Ottawa","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Pseudogene; Biology; Genetics; Retrotransposon; Genome; Chromosome; Gene; Human genome; Autosome; X chromosome; Y chromosome; Transposable element","score_opus":0.018395531620915354,"score_gpt":0.2687939560623814,"score_spread":0.25039842444146604,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2898407871","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9973462,0.00070907944,0.00006940624,0.00018552979,0.00005802551,0.00017672147,0.0000068464487,0.0000067265373,0.0014414421],"genre_scores_gemma":[0.9949795,0.00012219335,0.0010156012,0.0010437899,0.0006861038,0.000031129282,0.000028865026,0.000012102925,0.0020807015],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99906087,0.000059430087,0.00022196112,0.00033174478,0.00011174431,0.00021426917],"domain_scores_gemma":[0.9995704,0.000009094853,0.00006456927,0.00024745107,0.00006294679,0.000045479333],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002545733,0.00012750454,0.00011184845,0.000023163568,0.0001716792,0.00006440939,0.00020124424,0.00007801716,0.000062105835],"category_scores_gemma":[0.000022851089,0.0000946373,0.000034634366,0.00007403796,0.00017394895,0.0000052855667,0.000080882375,0.00005711283,0.000012071802],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000009126394,0.000048745576,0.001571732,0.00002347366,0.000008457369,0.0000033109231,0.00035869234,0.000009612922,0.99697405,0.000017830773,0.00011027744,0.0008646648],"study_design_scores_gemma":[0.00038822007,0.00050021167,0.017936263,0.000007536821,0.000011755717,0.000051347783,0.0008713523,0.000031709085,0.974943,0.000076481716,0.0049798065,0.00020233773],"about_ca_topic_score_codex":0.00001000064,"about_ca_topic_score_gemma":0.000058412752,"teacher_disagreement_score":0.022031099,"about_ca_system_score_codex":0.0000034358084,"about_ca_system_score_gemma":0.000028674003,"threshold_uncertainty_score":0.3859197},"labels":[],"label_agreement":null},{"id":"W2900811841","doi":"10.1016/j.gene.2018.11.037","title":"Dickkopf-1 reduces hypertrophic changes in human chondrocytes derived from bone marrow stem cells","year":2018,"lang":"en","type":"article","venue":"Gene","topic":"Osteoarthritis Treatment and Mechanisms","field":"Medicine","cited_by":12,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Mount Sinai Hospital; University of Toronto","funders":"National Institute of Arthritis and Musculoskeletal and Skin Diseases; Fondo Nacional de Desarrollo Científico y Tecnológico; National Institutes of Health; Ministerio de Economía, Fomento y Turismo, Chile; Clínica Las Condes","keywords":"Chondrogenesis; Chondrocyte; Wnt signaling pathway; Cartilage; DKK1; Biology; Mesenchymal stem cell; Cell biology; Anatomy; Signal transduction","score_opus":0.02213548091086921,"score_gpt":0.24438276034220574,"score_spread":0.22224727943133654,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2900811841","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99475956,0.0032200844,0.0000039569445,0.0004812641,0.00046106044,0.000378427,0.00002881859,0.000085500884,0.0005813241],"genre_scores_gemma":[0.99459493,0.00019667242,0.0011934293,0.00031535752,0.00086790585,0.000053212556,0.00008179013,0.000036965004,0.002659754],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99889284,0.000035689285,0.00019050924,0.0003602815,0.00019091724,0.00032974925],"domain_scores_gemma":[0.99943596,0.000018880199,0.00006349445,0.00029945665,0.000047219015,0.00013496503],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000057572935,0.00019311385,0.00035321128,0.00013128588,0.00009425303,0.00001949717,0.000078001845,0.00011929662,0.00049566437],"category_scores_gemma":[0.0000044969847,0.00016962239,0.000056455337,0.00012713786,0.00008275041,0.00004924948,0.000047847672,0.00009577199,0.00023452684],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010665185,0.00011050002,0.0006360381,0.000009066267,0.000022516582,0.00019635614,0.00056527636,7.194218e-8,0.97953,0.000008590288,0.00016136706,0.018653607],"study_design_scores_gemma":[0.0031330222,0.0017604793,0.0012924945,0.00014307769,0.000070290545,0.000025977655,0.00024982597,0.0000050079184,0.991806,0.00010699179,0.0012446663,0.00016217792],"about_ca_topic_score_codex":0.000106770174,"about_ca_topic_score_gemma":0.0006060692,"teacher_disagreement_score":0.01849143,"about_ca_system_score_codex":0.00006126172,"about_ca_system_score_gemma":0.000032423977,"threshold_uncertainty_score":0.69170004},"labels":[],"label_agreement":null},{"id":"W2903845550","doi":"10.1016/j.gene.2018.11.091","title":"Effects of Moringa oleifera Lam Extract (MOLE) in the heat shock protein 70 expression and germ cell apoptosis on experimentally induced cryptorchid testes of rats","year":2018,"lang":"en","type":"article","venue":"Gene","topic":"Moringa oleifera research and applications","field":"Agricultural and Biological Sciences","cited_by":16,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Montreal Clinical Research Institute","funders":"Gaziantep Üniversitesi","keywords":"Biology; Hsp70; Oxidative stress; Apoptosis; Malondialdehyde; Moringa; Superoxide dismutase; Reactive oxygen species; Germ cell; Antioxidant; Heat shock protein; Andrology; Endocrinology; Internal medicine; Biochemistry; Medicine","score_opus":0.021836060627549014,"score_gpt":0.2590113546337095,"score_spread":0.2371752940061605,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2903845550","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99860305,0.00013734274,0.0000023956136,0.00018128949,0.000014774057,0.00065756333,0.0000066602606,0.000009656542,0.00038727841],"genre_scores_gemma":[0.9994092,0.000026511163,0.00019088326,0.000036562185,0.00012063012,0.00017841195,0.000006027712,0.0000011642238,0.000030625746],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99908185,0.00011684411,0.00016944161,0.00020933255,0.00023260967,0.00018995133],"domain_scores_gemma":[0.99953073,0.00022659665,0.000055229328,0.00008989169,0.00003671224,0.00006082198],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00018889614,0.000103255545,0.00013121044,0.000017209755,0.00010921418,0.000023031233,0.00022383846,0.000050802446,0.000032990407],"category_scores_gemma":[0.000030897365,0.00003700245,0.000035384066,0.00018344446,0.00007005715,0.00004771498,0.00007060862,0.00009701755,0.000004025546],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000435756,0.00034844893,0.0010379814,0.000022576955,0.0000019843992,5.237576e-7,0.0002498005,4.42233e-7,0.9944946,0.000037940463,0.00003457622,0.0037275609],"study_design_scores_gemma":[0.00015822261,0.0009941905,0.049863033,0.00006878242,0.0000018025494,4.4324372e-7,0.00014956346,0.000008433349,0.94856733,0.000066154105,0.000054930293,0.00006711205],"about_ca_topic_score_codex":0.0001408665,"about_ca_topic_score_gemma":0.000016089189,"teacher_disagreement_score":0.04882505,"about_ca_system_score_codex":0.000010549736,"about_ca_system_score_gemma":0.000007760964,"threshold_uncertainty_score":0.15089162},"labels":[],"label_agreement":null},{"id":"W2904363927","doi":"10.1016/j.gene.2018.12.023","title":"Comparative analysis of chloroplast genomes of five Robinia species: Genome comparative and evolution analysis","year":2018,"lang":"en","type":"article","venue":"Gene","topic":"Genomics and Phylogenetic Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":71,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Egg Farmers of Canada","keywords":"Biology; Genome; Robinia; Gene; Genetics; Intron; Locust; Chloroplast DNA; Phylogenetic tree; Botany","score_opus":0.01903004951112292,"score_gpt":0.26112856069029833,"score_spread":0.2420985111791754,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2904363927","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9928462,0.0037048364,0.0016976681,0.000009075107,0.000036549765,0.000118592805,0.00044615043,0.0000014523024,0.0011395076],"genre_scores_gemma":[0.9979077,0.00037228217,0.0011377212,0.00001374769,0.000087360284,0.000006492048,0.000174799,0.000004550096,0.0002953655],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9990208,0.000050847953,0.00032449898,0.0003348817,0.00010604365,0.00016290684],"domain_scores_gemma":[0.99902993,0.000021397916,0.00024601223,0.000300575,0.00034998605,0.000052070558],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00011173034,0.0001586212,0.000654358,0.0002736189,0.00007821937,0.0000068752092,0.00013029417,0.00006730051,0.00003904254],"category_scores_gemma":[0.000007730261,0.00014741514,0.00019116412,0.00088202424,0.0004294084,0.0000010790311,0.00014342295,0.000029593604,0.0000019925317],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009856231,0.000050607505,0.033663016,0.0000069197667,0.011052502,1.8393177e-7,0.0023661824,0.004516081,0.9481079,0.00007393578,0.000046363133,0.000017736656],"study_design_scores_gemma":[0.00029444782,0.00042869456,0.7580971,0.0000017425485,0.0029546944,6.8857594e-7,0.0013664433,0.0014020449,0.23423392,0.000022604794,0.0010234676,0.00017411695],"about_ca_topic_score_codex":0.00008563432,"about_ca_topic_score_gemma":0.00070934696,"teacher_disagreement_score":0.72443414,"about_ca_system_score_codex":0.000015452732,"about_ca_system_score_gemma":0.000038054673,"threshold_uncertainty_score":0.60114145},"labels":[],"label_agreement":null},{"id":"W2907811671","doi":"10.1016/j.gene.2018.12.039","title":"Overexpression of maize sucrose non-fermenting-1-related protein kinase 1 genes, ZmSnRK1s, causes alteration in carbon metabolism and leaf senescence in Arabidopsis thaliana","year":2018,"lang":"en","type":"article","venue":"Gene","topic":"Plant nutrient uptake and metabolism","field":"Agricultural and Biological Sciences","cited_by":24,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ministry of Agriculture","funders":"Natural Science Foundation of Shandong Province; China Postdoctoral Science Foundation","keywords":"Biology; Arabidopsis; Invertase; Sucrose; Transgene; Arabidopsis thaliana; Cell biology; Senescence; Gene; Subcellular localization; Kinase; Biochemistry; Mutant","score_opus":0.01316187191128205,"score_gpt":0.21356457677984067,"score_spread":0.20040270486855863,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2907811671","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99744153,0.001778324,7.4083187e-7,0.00011580956,0.00010774509,0.00038488908,0.000041019845,0.000015220456,0.000114719405],"genre_scores_gemma":[0.9987163,0.00068382756,0.0001150212,0.000045224002,0.00012724087,0.000023301136,0.000055905366,0.0000015546552,0.00023162934],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9987639,0.00009943103,0.00034145982,0.0003342159,0.00017905611,0.00028190925],"domain_scores_gemma":[0.99964404,0.000026622405,0.00013804177,0.000076589626,0.0000484361,0.000066250606],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00028545447,0.00015243108,0.0002578295,0.000047512724,0.000057111054,0.000025926698,0.00012034996,0.00012320251,0.000038179944],"category_scores_gemma":[0.000034617817,0.000072210685,0.00003347869,0.00040813285,0.00007305601,0.00013344362,0.00007138101,0.000090456604,0.00000368031],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000058164856,0.000086552034,0.018064063,0.000008016872,0.0000040870423,0.000007545347,0.0002129157,0.0000023678053,0.97231275,0.000039197294,0.000013725506,0.009190633],"study_design_scores_gemma":[0.0004012388,0.0000514048,0.3333579,0.00011507471,0.0000077457635,0.000004237749,0.000054354532,0.00019191678,0.66393286,0.0001172511,0.0016372567,0.00012874282],"about_ca_topic_score_codex":0.0017516811,"about_ca_topic_score_gemma":0.00089473336,"teacher_disagreement_score":0.31529382,"about_ca_system_score_codex":0.000013551504,"about_ca_system_score_gemma":0.000011457836,"threshold_uncertainty_score":0.2944666},"labels":[],"label_agreement":null},{"id":"W2913614170","doi":"10.1016/j.gene.2019.01.024","title":"The evolving role of protein disulfide isomerase A3 in Egyptian bladder cancer patients","year":2019,"lang":"en","type":"article","venue":"Gene","topic":"Endoplasmic Reticulum Stress and Disease","field":"Biochemistry, Genetics and Molecular Biology","cited_by":4,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Prince Edward Island","funders":"","keywords":"Bladder cancer; Biology; Protein disulfide-isomerase; Internal medicine; Malondialdehyde; Pathology; Gastroenterology; Cancer; Endocrinology; Endoplasmic reticulum; Oxidative stress; Medicine; Biochemistry; Genetics","score_opus":0.0018660159584902066,"score_gpt":0.20544898910089543,"score_spread":0.20358297314240523,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2913614170","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9938311,0.0049094907,0.000003393811,0.000038437964,0.000067972454,0.00026955392,0.00003828704,0.0000023798864,0.00083938544],"genre_scores_gemma":[0.9990379,0.0002395979,0.000043986583,0.000044852335,0.00004200886,0.00006314145,0.000027648855,0.000011396923,0.00048943295],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9993535,0.0000332419,0.0001520503,0.00018135991,0.00010227842,0.00017756231],"domain_scores_gemma":[0.99957323,0.000008404632,0.00006436383,0.00025093474,0.000053404445,0.00004963474],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000055085777,0.000084603984,0.00008217679,0.00001596338,0.00003158513,0.000011190099,0.00012878607,0.000048368227,0.000067924455],"category_scores_gemma":[0.000050295104,0.00006120836,0.000049285707,0.000049514158,0.000033651344,0.0000027047213,0.000079787555,0.000040662242,0.000009355214],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000057985988,0.00009981698,0.25042957,0.000015890831,0.000026372732,6.0678843e-7,0.000049139526,0.00015989516,0.74460495,0.000024595287,0.0001719291,0.0043592495],"study_design_scores_gemma":[0.0010654427,0.00016816607,0.16208516,0.00007174016,0.000014294396,3.8488741e-7,0.00015461407,0.00026018845,0.8314128,0.00013039992,0.004424579,0.0002122092],"about_ca_topic_score_codex":0.00014339287,"about_ca_topic_score_gemma":0.00015314332,"teacher_disagreement_score":0.088344425,"about_ca_system_score_codex":0.000009780859,"about_ca_system_score_gemma":0.00005250138,"threshold_uncertainty_score":0.24960044},"labels":[],"label_agreement":null},{"id":"W2914538875","doi":"10.1016/j.gene.2019.01.022","title":"A comprehensive analysis of chimpanzee (Pan troglodytes)-specific LINE-1 retrotransposons","year":2019,"lang":"en","type":"article","venue":"Gene","topic":"Chromosomal and Genetic Variations","field":"Agricultural and Biological Sciences","cited_by":5,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Brock University","funders":"Dankook University","keywords":"Retrotransposon; Biology; Genome; Genetics; Genome evolution; Evolutionary biology; Human genome; Primate; Transposable element; Gene","score_opus":0.022962169848777372,"score_gpt":0.21979004481059716,"score_spread":0.1968278749618198,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2914538875","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99812514,0.00037502585,0.000016769876,0.00045253578,0.000068184134,0.00015071592,0.00027949744,0.000025637097,0.0005064802],"genre_scores_gemma":[0.998927,0.00009157362,0.00036635913,0.0000751686,0.0001001436,0.000005299315,0.00024625406,6.059059e-7,0.00018757841],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9992247,0.000030724597,0.00020138807,0.00022376925,0.00015349367,0.0001659317],"domain_scores_gemma":[0.99961865,0.00007784833,0.00007273211,0.000093732815,0.00008032866,0.000056699402],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.000037991296,0.000095068586,0.00026351196,0.00002621179,0.000056462675,0.000013407336,0.00016622744,0.000059622904,0.0019325693],"category_scores_gemma":[0.0000030647864,0.00003848511,0.00022895414,0.0009771915,0.000025690471,0.000024931662,0.00002643807,0.00005255865,0.00008544174],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000014304563,0.000061810984,0.025255658,0.0000025142556,0.00017419779,6.089721e-7,0.00006154698,0.00017417387,0.9678822,0.00017127219,0.00003388503,0.0061678374],"study_design_scores_gemma":[0.00016047468,0.00023627804,0.9442044,0.0000045530687,0.00017116785,0.0000014223629,0.000084152896,0.00043129642,0.042659882,0.00017449817,0.011741206,0.00013069955],"about_ca_topic_score_codex":0.000100565296,"about_ca_topic_score_gemma":0.00018494132,"teacher_disagreement_score":0.9252223,"about_ca_system_score_codex":0.000010189038,"about_ca_system_score_gemma":0.000004776931,"threshold_uncertainty_score":0.9989798},"labels":[],"label_agreement":null},{"id":"W2914654999","doi":"10.1016/j.gene.2019.02.020","title":"Curation and bioinformatic analysis of strabismus genes supports functional heterogeneity and proposes candidate genes with connections to RASopathies","year":2019,"lang":"en","type":"article","venue":"Gene","topic":"Ophthalmology and Eye Disorders","field":"Medicine","cited_by":11,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"BC Children's Hospital; University of British Columbia","funders":"Canadian Institutes of Health Research; Natural Sciences and Engineering Research Council of Canada; Nederlandse Organisatie voor Wetenschappelijk Onderzoek","keywords":"Biology; Gene; Phenotype; Genetics; Candidate gene; Computational biology; Strabismus","score_opus":0.010908903802285453,"score_gpt":0.2532438561107492,"score_spread":0.24233495230846372,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2914654999","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9981377,0.0005866411,0.00055137445,0.00023084618,0.000057817928,0.00029486688,0.00003276149,0.000013576161,0.000094420255],"genre_scores_gemma":[0.9988714,0.000118246135,0.0006564061,0.00009021804,0.000012842396,0.000014558151,0.00013577312,0.000005284706,0.00009529467],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9994534,0.000020531577,0.0001653207,0.00015201581,0.00010085313,0.00010782591],"domain_scores_gemma":[0.9996282,0.000022211996,0.00006419599,0.00013262793,0.00008215959,0.00007061864],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000102788246,0.00009207032,0.00024247143,0.00023544395,0.000068062844,0.000009453309,0.000015700005,0.000051599305,0.00010599847],"category_scores_gemma":[0.0000110162855,0.00006922913,0.00003314271,0.00027384752,0.00007235379,0.000109540444,0.00001642375,0.00003897202,0.000004713849],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00025918803,0.00004848109,0.97225237,0.000121902325,0.00072377996,0.000006421009,0.00030335132,0.00080494315,0.023535093,0.0000462556,0.00001623898,0.0018819937],"study_design_scores_gemma":[0.000720757,0.00075061416,0.96591383,0.000018867464,0.0010854966,0.00029976037,0.0006796719,0.0010496604,0.029239178,0.000026624273,0.00009145803,0.00012405163],"about_ca_topic_score_codex":0.00009177136,"about_ca_topic_score_gemma":0.00023728408,"teacher_disagreement_score":0.0063384906,"about_ca_system_score_codex":0.000008886149,"about_ca_system_score_gemma":0.000054186672,"threshold_uncertainty_score":0.2823082},"labels":[],"label_agreement":null},{"id":"W2920094334","doi":"10.1016/j.gene.2019.02.079","title":"Pck-ing up steam: Widening the salmonid gluconeogenic gene duplication trail","year":2019,"lang":"en","type":"article","venue":"Gene","topic":"Aquaculture Nutrition and Growth","field":"Agricultural and Biological Sciences","cited_by":19,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Ottawa","funders":"FP7 People: Marie-Curie Actions; Natural Sciences and Engineering Research Council of Canada; AgreenSkills; Université de Pau et des Pays de l'Adour; Mitacs; Canada Foundation for Innovation; Institut National de la Recherche Agronomique; Agence Nationale de la Recherche","keywords":"Biology; Gene duplication; Rainbow trout; Genetics; Gluconeogenesis; Gene; Genome; Phosphoenolpyruvate carboxykinase; Trout; Evolutionary biology; Fishery; Biochemistry; Enzyme","score_opus":0.01799647879236038,"score_gpt":0.2134473005299258,"score_spread":0.19545082173756542,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2920094334","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99430126,0.0007238693,0.000018295368,0.0034096036,0.00013735604,0.00023642648,0.00001775101,0.00006679197,0.001088634],"genre_scores_gemma":[0.99606293,0.0001072508,0.0001112217,0.00086720876,0.00038742606,0.000018328235,0.00009600257,0.0000011959806,0.0023484332],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99916315,0.000051346226,0.00015843734,0.00024423457,0.00017198053,0.00021087503],"domain_scores_gemma":[0.9996672,0.00006955081,0.00007419223,0.00008222039,0.00004799421,0.000058819376],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00017334707,0.00010681439,0.00011050184,0.0000058140135,0.00021058241,0.00005644512,0.00024589492,0.00007720792,0.0006345992],"category_scores_gemma":[0.000013507139,0.000034431694,0.00009307855,0.00021333397,0.00002764975,0.00008693914,0.0000409564,0.00010232971,0.00056721404],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000011262929,0.000015419508,0.001797517,0.0000021018109,0.000008420241,6.383482e-7,0.00009615784,0.0000046669957,0.9773212,0.000108782355,0.0009181276,0.019715704],"study_design_scores_gemma":[0.0004594259,0.00018397253,0.1744496,0.000019810148,0.000029440387,0.000066173445,0.0008558534,0.00015524747,0.68867856,0.000707689,0.13402739,0.00036683204],"about_ca_topic_score_codex":0.00006649933,"about_ca_topic_score_gemma":0.000059620517,"teacher_disagreement_score":0.28864262,"about_ca_system_score_codex":0.000019035991,"about_ca_system_score_gemma":0.0000046787895,"threshold_uncertainty_score":0.72905785},"labels":[],"label_agreement":null},{"id":"W2920965761","doi":"10.1016/j.gene.2019.03.001","title":"Chromatin organization of transcribed genes in chicken polychromatic erythrocytes","year":2019,"lang":"en","type":"article","venue":"Gene","topic":"Genomics and Chromatin Dynamics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":9,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Biology; Chromatin; ChIA-PET; ChIP-sequencing; Gene; Histone; Chromatin immunoprecipitation; DNA; Genetics; DNA sequencing; Nucleosome; ChIP-on-chip; genomic DNA; Genome; Cell biology; Gene expression; Promoter","score_opus":0.0031271308963405926,"score_gpt":0.18843453152177075,"score_spread":0.18530740062543016,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2920965761","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9982503,0.0005546611,0.00052336697,0.000041862862,0.00010262983,0.00020046317,0.000018766916,0.000008063582,0.00029988427],"genre_scores_gemma":[0.9966635,0.00021026167,0.0025988277,0.000041817668,0.000043962304,0.000004514014,0.00024029677,0.000027797512,0.00016901197],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9992578,0.000026668633,0.00026712148,0.00020682113,0.00008569612,0.00015589359],"domain_scores_gemma":[0.9995311,0.000005472581,0.00009300992,0.000291703,0.000048977385,0.000029730807],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00008540487,0.00011589869,0.00017131185,0.000051173836,0.00001763893,0.000008861625,0.00016220957,0.00010811449,0.000084198495],"category_scores_gemma":[0.000016324668,0.00011857539,0.000043012646,0.00015988489,0.00002593009,0.0000029523353,0.000045865472,0.000035123372,0.000023743638],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000007453159,0.00004734447,0.019532908,0.000061019815,0.00002114611,5.095628e-7,0.00012638513,0.0005588481,0.9791145,0.000045578232,0.000027830964,0.0004565103],"study_design_scores_gemma":[0.0007071394,0.00012417106,0.03395218,0.000019956078,0.000009994674,0.00001162758,0.00010026277,0.00095762697,0.9637389,0.00006669878,0.00015396423,0.00015745385],"about_ca_topic_score_codex":0.000027276918,"about_ca_topic_score_gemma":0.00004196632,"teacher_disagreement_score":0.0153755415,"about_ca_system_score_codex":0.000014109334,"about_ca_system_score_gemma":0.0000624916,"threshold_uncertainty_score":0.48353642},"labels":[],"label_agreement":null},{"id":"W2924689322","doi":"10.1016/j.gene.2019.03.035","title":"Molecular cloning, expression and characterization of Pekin duck programmed death-1","year":2019,"lang":"en","type":"article","venue":"Gene","topic":"Immune Cell Function and Interaction","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"Canadian Liver Foundation; Canadian Institutes of Health Research; Health Canada; Alberta Innovates - Health Solutions","keywords":"Biology; Conserved sequence; Immunoreceptor tyrosine-based activation motif; Complementary DNA; Gene; Tyrosine; Peptide sequence; Molecular biology; Amino acid; Cell biology; Genetics; Signal transduction; Protein tyrosine phosphatase; Biochemistry; SH2 domain","score_opus":0.0066627242033902075,"score_gpt":0.21061042725187543,"score_spread":0.20394770304848522,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2924689322","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9972191,0.00038380144,0.00046357836,0.000038747494,0.0010548246,0.00016780815,0.0000013233932,0.000024945695,0.000645886],"genre_scores_gemma":[0.99220926,0.00006070448,0.000054258333,0.00006538602,0.000008591806,0.000006770291,0.00023765034,0.000007697985,0.0073496797],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99956864,0.00005254703,0.00013521533,0.00012773598,0.000016330523,0.00009951891],"domain_scores_gemma":[0.9997304,0.000007971661,0.00009154796,0.00012254094,0.00004049065,0.0000070118535],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000057073674,0.0000650294,0.00010517302,0.00004747908,0.000030017758,0.0000057334582,0.00003702568,0.0000956227,0.0006024407],"category_scores_gemma":[0.000009123453,0.000057996604,0.000027888585,0.00003572218,0.000018935958,0.000062344516,0.000028910255,0.00007529919,0.00017677515],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010600164,0.000034004115,0.0024533581,0.000011784036,0.000018466548,3.3495562e-7,0.00013879099,9.457252e-7,0.9950604,0.00008238972,0.00007201455,0.0020215164],"study_design_scores_gemma":[0.00051278085,0.00012475232,0.009790864,0.000019912064,0.000008762405,0.000017388871,0.000034900957,0.00000933583,0.95315766,0.000004020812,0.03626164,0.000057966063],"about_ca_topic_score_codex":0.000014447458,"about_ca_topic_score_gemma":2.1466057e-7,"teacher_disagreement_score":0.041902717,"about_ca_system_score_codex":0.000007463512,"about_ca_system_score_gemma":0.000008565591,"threshold_uncertainty_score":0.6596303},"labels":[],"label_agreement":null},{"id":"W2941525845","doi":"10.1016/j.gene.2019.04.057","title":"Novel nucleotide variants in SLA-DOB and CD4 are associated with immune traits in pregnant sows","year":2019,"lang":"en","type":"article","venue":"Gene","topic":"Animal Virus Infections Studies","field":"Agricultural and Biological Sciences","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"Program for Changjiang Scholars and Innovative Research Team in University; National Key Research and Development Program of China; China Agricultural University; National Natural Science Foundation of China","keywords":"Biology; Single-nucleotide polymorphism; Candidate gene; Genetics; Immune system; Gene; Antibody; SNP; Immunity; Genotype; Immunology","score_opus":0.0198847054188003,"score_gpt":0.19936443777826512,"score_spread":0.17947973235946482,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2941525845","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9983333,0.0003278015,0.0000010154795,0.0002013219,0.00003069099,0.00020019858,0.000030008025,0.000021607015,0.00085408305],"genre_scores_gemma":[0.9995307,0.000080709004,0.00005320019,0.000056709647,0.000017588396,0.000011801462,0.000005871788,9.339684e-7,0.00024249786],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99935377,0.000027428845,0.00013249247,0.00020259549,0.00008023063,0.00020351485],"domain_scores_gemma":[0.99980545,0.000060752158,0.00006307926,0.00002435568,0.000023292203,0.000023054567],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012927708,0.00009327269,0.00017259366,0.000014130245,0.00006381233,0.000017268138,0.00006887834,0.000051207324,0.000067626745],"category_scores_gemma":[0.00004232334,0.0000352892,0.000018233543,0.0002900647,0.00003242732,0.00006701425,0.00005859939,0.000086681626,0.00002052825],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000030659918,0.00017326663,0.3179506,0.0000033718468,0.000017812086,0.0000065111094,0.00017377928,0.000015971542,0.6762708,0.00005546316,0.000015174862,0.0052865786],"study_design_scores_gemma":[0.00034905947,0.00019576258,0.9974844,0.0000964586,0.0000037450516,0.0000035919038,0.0002533135,0.000035632227,0.0013195705,0.000036513615,0.000113086695,0.0001089063],"about_ca_topic_score_codex":0.00054099556,"about_ca_topic_score_gemma":0.014150985,"teacher_disagreement_score":0.6795337,"about_ca_system_score_codex":0.000031957406,"about_ca_system_score_gemma":0.0000041378444,"threshold_uncertainty_score":0.7896581},"labels":[],"label_agreement":null},{"id":"W2962690198","doi":"10.1016/j.gene.2019.143970","title":"Sequencing of NOTCH1 gene in an Italian population with bicuspid aortic valve: Preliminary results from the GISSI OUTLIERS VAR study","year":2019,"lang":"en","type":"article","venue":"Gene","topic":"Congenital heart defects research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":6,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Health Care Foundation","funders":"","keywords":"Bicuspid aortic valve; Biology; Exon; Genetics; Genotyping; Penetrance; Candidate gene; Intron; Aortic valve; Internal medicine; Gene; Genotype; Medicine; Phenotype","score_opus":0.01965713091227294,"score_gpt":0.28907094962074625,"score_spread":0.2694138187084733,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2962690198","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9986649,0.00023240122,0.00001905378,0.00004530857,0.00006299365,0.0007955359,0.00006645992,0.000007945143,0.00010540921],"genre_scores_gemma":[0.9989353,0.000009686124,0.00036865912,0.000034572724,0.00008771142,0.000020157824,0.00034198017,0.000025787775,0.00017615895],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9985794,0.00018654272,0.00028161783,0.00043371454,0.00027235778,0.00024636675],"domain_scores_gemma":[0.99897647,0.00003625808,0.00008060997,0.00074400107,0.00009260488,0.00007002761],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00036332084,0.00013561516,0.00016325038,0.00005293682,0.000046529833,0.000022675309,0.00023014034,0.000087414344,0.000012887013],"category_scores_gemma":[0.000077849145,0.00009908569,0.000052996613,0.00018383485,0.000041162177,0.000011143077,0.00013003417,0.000112435155,0.000012558791],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0010785636,0.00013901704,0.24700943,0.000011070428,0.00006746001,0.000009572022,0.0008501167,0.0009540686,0.7468067,5.262516e-7,0.000015312215,0.0030582068],"study_design_scores_gemma":[0.0017779038,0.0038063028,0.78235215,0.000027125925,0.000038736318,0.0000071516633,0.0011252548,0.00089570595,0.20969634,0.000017925922,0.000045506436,0.00020987664],"about_ca_topic_score_codex":0.0017508317,"about_ca_topic_score_gemma":0.0013491153,"teacher_disagreement_score":0.5371103,"about_ca_system_score_codex":0.000044820677,"about_ca_system_score_gemma":0.00010391631,"threshold_uncertainty_score":0.4040597},"labels":[],"label_agreement":null},{"id":"W2980951583","doi":"10.1016/j.gene.2019.144161","title":"The ORF in the control region of the female-transmitted Mytilus mtDNA codes for a protein","year":2019,"lang":"en","type":"letter","venue":"Gene","topic":"Aquatic Invertebrate Ecology and Behavior","field":"Environmental Science","cited_by":16,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal","funders":"Natural Sciences and Engineering Research Council of Canada; Narodowym Centrum Nauki","keywords":"Biology; Mitochondrial DNA; Mytilus; Open reading frame; Mussel; Genetics; mtDNA control region; Genome; Sperm; Blue mussel; Mitochondrion; Gene; Zoology; Molecular biology; Fishery; Genotype; Peptide sequence","score_opus":0.015573459373348924,"score_gpt":0.22073716568880114,"score_spread":0.20516370631545222,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2980951583","genre_codex":"commentary","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.31725195,0.0001412002,0.001639207,0.6704926,0.00061038596,0.008675091,0.000080136284,0.000017578826,0.0010918524],"genre_scores_gemma":[0.7357077,0.000011809235,0.00013346887,0.2529885,0.0003291837,0.0010463474,0.000028192168,0.000031453408,0.009723337],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9985099,0.00036260684,0.0002749897,0.0002539929,0.00026582833,0.00033269622],"domain_scores_gemma":[0.9988941,0.0003131248,0.0002136998,0.0005608712,0.00000964354,0.000008574835],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005986925,0.00017633637,0.0002314608,0.000014034792,0.00022390494,0.000019089484,0.0009472366,0.00037677956,0.00021726133],"category_scores_gemma":[0.000050558436,0.00007686373,0.00014603545,0.0001218188,0.0004531198,0.000034970875,0.00005632246,0.0005737995,0.00015686644],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010260794,0.00007744785,0.00876588,0.00006210077,0.000043582102,0.000035198234,0.0007895341,0.00004190044,0.009830546,0.000064929045,0.97811127,0.0020750165],"study_design_scores_gemma":[0.0043010474,0.00062191667,0.06511786,0.00018203614,0.0005320945,0.000091843205,0.0003318913,0.0019803615,0.017590193,0.0049988795,0.9033746,0.00087729143],"about_ca_topic_score_codex":0.00014058477,"about_ca_topic_score_gemma":0.0004079177,"teacher_disagreement_score":0.41845575,"about_ca_system_score_codex":0.00007162585,"about_ca_system_score_gemma":0.00003950688,"threshold_uncertainty_score":0.3134412},"labels":[],"label_agreement":null},{"id":"W2995234713","doi":"10.1016/j.gene.2019.144296","title":"Variation in the rates of evolution of the insulin and glucagon hormone and receptor genes in rodents","year":2019,"lang":"en","type":"article","venue":"Gene","topic":"Metabolism, Diabetes, and Cancer","field":"Biochemistry, Genetics and Molecular Biology","cited_by":8,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Diabetes Canada","funders":"","keywords":"Glucagon receptor; Biology; Glucagon; Receptor; Gene; Insulin; Hormone; Endocrinology; Internal medicine; Locus (genetics); Genetics","score_opus":0.0054670028821578375,"score_gpt":0.21825850594858132,"score_spread":0.21279150306642347,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2995234713","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.85061044,0.14915216,0.000017165728,0.000018106683,0.000058467966,0.000114885304,0.000008347941,3.3862767e-7,0.000020066913],"genre_scores_gemma":[0.97787356,0.021957036,0.00006611179,0.00003417295,0.000035259724,0.000006801169,0.000007253163,0.0000029389487,0.000016835045],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99961096,0.000067166664,0.00010966156,0.00009738741,0.00005643487,0.00005837606],"domain_scores_gemma":[0.99977994,0.0000059214044,0.00005831261,0.00012725587,0.00002182843,0.0000067260985],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00020564256,0.000042082313,0.00007278866,0.000018118242,0.000008675307,0.0000031156658,0.000064214655,0.000051286705,0.0000032566816],"category_scores_gemma":[0.000020543654,0.000027178035,0.000012499287,0.00006954263,0.000025300806,0.0000025883423,0.00003397381,0.00002525857,3.8297944e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000032166794,0.000018911269,0.027410971,0.000012765819,0.000005522336,1.1835762e-8,0.00019551779,0.000025964713,0.96415013,0.000031994103,0.000020890184,0.008095182],"study_design_scores_gemma":[0.00050312415,0.000049584487,0.5593052,0.0000071449044,0.0000054280526,3.0311992e-7,0.00008624175,0.000052640244,0.438146,0.00011186846,0.0016976055,0.000034904097],"about_ca_topic_score_codex":0.00010863621,"about_ca_topic_score_gemma":0.00006123715,"teacher_disagreement_score":0.5318942,"about_ca_system_score_codex":0.000004963651,"about_ca_system_score_gemma":0.000021616503,"threshold_uncertainty_score":0.11082881},"labels":[],"label_agreement":null},{"id":"W3012131150","doi":"10.1016/j.gene.2020.144557","title":"Comparative genomic analysis of the 3′ UTR of human MDM2 identifies multiple transposable elements, an RLP24 pseudogene and a cluster of novel repeat sequences that arose during primate evolution","year":2020,"lang":"en","type":"article","venue":"Gene","topic":"Cancer-related Molecular Pathways","field":"Medicine","cited_by":6,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Carleton University","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Biology; Pseudogene; Genetics; Transposable element; Untranslated region; Genome; Intergenic region; Gene; Sequence analysis; RNA","score_opus":0.050496334326581606,"score_gpt":0.29163270758895204,"score_spread":0.24113637326237045,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3012131150","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99748045,0.0008617389,0.0008250311,0.000077213714,0.00003366445,0.00046083558,0.00021840965,0.00001320509,0.000029444936],"genre_scores_gemma":[0.99882495,0.000064044005,0.00094341626,0.000031569707,0.000019230907,0.000010193387,0.00006957494,0.000012821075,0.000024191142],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99876934,0.00005986985,0.00046786782,0.00028360408,0.00027072223,0.0001486055],"domain_scores_gemma":[0.9991318,0.000014486378,0.00034652968,0.0003332581,0.00010614264,0.000067802095],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001550236,0.00013289576,0.0005302753,0.00013531337,0.000069798756,0.000006429109,0.00012170326,0.00005771503,0.00002277506],"category_scores_gemma":[0.000014702146,0.00010818315,0.0001700758,0.0004431809,0.00017309924,0.000073995805,0.000059720787,0.00008582521,3.3909697e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002477625,0.000102176884,0.04943443,0.00021468877,0.0009210011,0.0000016893663,0.00455197,0.0062957867,0.9382051,0.000009035695,0.0000036618915,0.00001266004],"study_design_scores_gemma":[0.0018639029,0.00016301933,0.12726516,0.000071697534,0.0014258497,0.000005324348,0.0006200881,0.012718281,0.8557778,0.0000061118476,0.0000026974017,0.00008004054],"about_ca_topic_score_codex":0.00030574467,"about_ca_topic_score_gemma":0.00052102306,"teacher_disagreement_score":0.08242731,"about_ca_system_score_codex":0.00007314281,"about_ca_system_score_gemma":0.00005943346,"threshold_uncertainty_score":0.4411581},"labels":[],"label_agreement":null},{"id":"W3012330436","doi":"10.1016/j.gene.2020.144593","title":"Genomic landscape of transcriptionally active histone arginine methylation marks, H3R2me2s and H4R3me2a, relative to nucleosome depleted regions","year":2020,"lang":"en","type":"article","venue":"Gene","topic":"Cancer-related gene regulation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":32,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Biology; Histone; Chromatin; Histone H4; Histone methyltransferase; Nucleosome; Histone code; Acetylation; Histone methylation; Methylation; EZH2; Genetics; Molecular biology; DNA methylation; Gene; Gene expression","score_opus":0.01179357390594254,"score_gpt":0.23844293920891543,"score_spread":0.2266493653029729,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3012330436","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9793577,0.0017219865,0.0149347335,0.002985198,0.00007749937,0.0003262356,0.00008914029,0.000016788648,0.00049068965],"genre_scores_gemma":[0.9960286,0.00020260105,0.002544644,0.00029215647,0.00019269995,0.000017908602,0.000399712,0.000027206768,0.0002944533],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9991215,0.000053549436,0.00022329479,0.0003479057,0.00011655539,0.0001371939],"domain_scores_gemma":[0.99948305,0.000012845187,0.00011141367,0.00016563389,0.000104044215,0.00012303675],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00005717285,0.00013409209,0.00017207288,0.00006101079,0.000052075768,0.0000061565415,0.000079678604,0.00014110304,0.00004366363],"category_scores_gemma":[0.000050984843,0.0001481855,0.00006796523,0.00017367967,0.00004838826,0.000008453518,0.000044317218,0.00007755253,0.0000064646656],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00044868878,0.000017015185,0.00018900057,0.000011645255,0.00011373339,6.8451055e-7,0.00052598765,0.0011519333,0.9942206,0.00014954671,0.0012353777,0.0019357789],"study_design_scores_gemma":[0.0021554122,0.0009018202,0.10332273,0.000021483285,0.00017365346,0.000018746612,0.0001585674,0.0016102465,0.84948653,0.00042244676,0.041281454,0.00044690358],"about_ca_topic_score_codex":0.000012847328,"about_ca_topic_score_gemma":0.00003655387,"teacher_disagreement_score":0.14473407,"about_ca_system_score_codex":0.000032014173,"about_ca_system_score_gemma":0.00006821905,"threshold_uncertainty_score":0.6042829},"labels":[],"label_agreement":null},{"id":"W3012497292","doi":"10.1016/j.gene.2020.144588","title":"Overexpressing Jatropha curcas CBF2 in Nicotiana benthamiana improved plant tolerance to drought stress","year":2020,"lang":"en","type":"article","venue":"Gene","topic":"Plant Stress Responses and Tolerance","field":"Agricultural and Biological Sciences","cited_by":18,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Ministry of Agriculture - Saskatchewan","keywords":"Biology; Jatropha curcas; Nicotiana benthamiana; Jasmonic acid; Drought tolerance; Abscisic acid; Botany; Plant hormone; Genetically modified crops; Cytokinin; Arabidopsis; Gene; Auxin; Transgene; Genetics","score_opus":0.01885695110776868,"score_gpt":0.20779993750085085,"score_spread":0.18894298639308216,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3012497292","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9941256,0.00080151274,0.000024676268,0.0035360765,0.0001218036,0.00022379673,0.0008757589,0.000052202366,0.00023859082],"genre_scores_gemma":[0.99699557,0.00011923178,0.00024750552,0.0019028989,0.0005214916,0.000016052169,0.00007329448,0.0000018904636,0.00012207402],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9985869,0.00005777344,0.00025046853,0.0004494666,0.00018793569,0.00046744035],"domain_scores_gemma":[0.9995249,0.00007884788,0.00007264297,0.00007138512,0.000019449868,0.0002327946],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000053296764,0.00018462914,0.00025715542,0.0000099299195,0.00012498203,0.00007973716,0.00032560935,0.000078867946,0.00016641108],"category_scores_gemma":[0.000034635043,0.000085084124,0.00007261243,0.00035431454,0.000020538653,0.00010928329,0.00011486234,0.00014078479,0.000050478448],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003583769,0.000052804357,0.005312269,0.000015410631,0.000008675522,0.00008453104,0.00018562695,0.001110282,0.97090304,0.00003172323,0.0011338876,0.02080337],"study_design_scores_gemma":[0.0015461309,0.0008837803,0.41925028,0.00045821193,0.00002338706,0.000041300627,0.00039288244,0.017683566,0.40101802,0.000097972246,0.15713155,0.0014729212],"about_ca_topic_score_codex":0.0004460743,"about_ca_topic_score_gemma":0.001405202,"teacher_disagreement_score":0.569885,"about_ca_system_score_codex":0.000023396951,"about_ca_system_score_gemma":0.000011107459,"threshold_uncertainty_score":0.346963},"labels":[],"label_agreement":null},{"id":"W3012985476","doi":"10.1016/j.gene.2020.144608","title":"PKMYT1 is associated with prostate cancer malignancy and may serve as a therapeutic target","year":2020,"lang":"en","type":"article","venue":"Gene","topic":"Cancer, Lipids, and Metabolism","field":"Biochemistry, Genetics and Molecular Biology","cited_by":41,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia; BC Cancer Agency","funders":"National Key Research and Development Program of China; Tianjin Medical University","keywords":"Biology; Prostate cancer; Malignancy; Cancer research; Gene knockdown; Cancer; Cell cycle; Computational biology; Gene; Genetics","score_opus":0.011015685217848474,"score_gpt":0.23951519306876737,"score_spread":0.22849950785091888,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3012985476","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9702358,0.025193864,0.00008484132,0.0027474163,0.00070848735,0.00029659987,0.00021094816,0.000023746356,0.0004982896],"genre_scores_gemma":[0.9798421,0.0042219628,0.0002291251,0.009475142,0.0028366512,0.00007867814,0.0001263185,0.000037610465,0.0031523788],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.99919164,0.000031569663,0.00010979481,0.00033356322,0.00010295738,0.00023048461],"domain_scores_gemma":[0.99960315,0.0000027920871,0.000064972766,0.00014274633,0.000069104964,0.00011723354],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00005184905,0.00014792755,0.00016568166,0.000011401378,0.000054838583,0.000022860162,0.00008262171,0.00008806224,0.00008493955],"category_scores_gemma":[0.000012298559,0.00012258111,0.000040870065,0.000089636815,0.000047231162,0.0000034436957,0.00004858228,0.000060980718,0.000006661529],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00045202923,0.00004188117,0.011137501,0.00004103368,0.00037852576,0.0000016554918,0.0013937209,0.000036562422,0.9559197,0.000032808923,0.024576824,0.005987779],"study_design_scores_gemma":[0.0014395543,0.0003682401,0.00843153,0.000022692566,0.000081363345,0.000009507138,0.00009487883,0.00003435546,0.32237774,0.0000717504,0.6667652,0.00030316206],"about_ca_topic_score_codex":0.00009756363,"about_ca_topic_score_gemma":0.00007289936,"teacher_disagreement_score":0.64218843,"about_ca_system_score_codex":0.000008714208,"about_ca_system_score_gemma":0.00013257044,"threshold_uncertainty_score":0.49987128},"labels":[],"label_agreement":null},{"id":"W3020687898","doi":"10.1016/j.gene.2020.144707","title":"ANGPTL8 enhances insulin sensitivity by directly activating insulin-mediated AKT phosphorylation","year":2020,"lang":"en","type":"article","venue":"Gene","topic":"Lipid metabolism and disorders","field":"Medicine","cited_by":25,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"National Natural Science Foundation of China; Biomedical Research Foundation","keywords":"Biology; Protein kinase B; Insulin; Phosphorylation; PI3K/AKT/mTOR pathway; Proto-Oncogene Proteins c-akt; Carbohydrate metabolism; Cell biology; Gene knockdown; Internal medicine; Signal transduction; Endocrinology; Biochemistry; Apoptosis","score_opus":0.013668498080641415,"score_gpt":0.23750323239215432,"score_spread":0.2238347343115129,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3020687898","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98986447,0.0034684874,0.0012304393,0.0027424707,0.00024265767,0.00028543762,0.000057658868,0.00019436394,0.001914016],"genre_scores_gemma":[0.9938426,0.00051689526,0.0011944618,0.0034805052,0.00053472363,0.000011169552,0.00029933415,0.000026704176,0.000093596194],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9988368,0.00007276215,0.00023947012,0.00032979663,0.00027314483,0.00024802313],"domain_scores_gemma":[0.99930495,0.00011143549,0.00011130059,0.00016027385,0.00008853471,0.00022349833],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00018244749,0.00016685063,0.00031555432,0.0000374523,0.00008223076,0.000018090916,0.000044488963,0.000102363105,0.00010782414],"category_scores_gemma":[0.0008349339,0.00015230464,0.000066892324,0.00039835827,0.000043796757,0.0001354064,0.000040428575,0.00017887898,0.00014360173],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00022935901,0.00009116677,0.0021214534,0.000035688077,0.000038540158,0.000010261153,0.0010597721,0.000010306756,0.9455564,0.0000058989845,0.003766169,0.04707501],"study_design_scores_gemma":[0.0018155263,0.000110752844,0.01474689,0.000019976393,0.000046180336,0.0000038490707,0.00023504112,0.0012267125,0.9454603,0.000013756558,0.036126997,0.00019401983],"about_ca_topic_score_codex":0.00012340184,"about_ca_topic_score_gemma":0.0000068320296,"teacher_disagreement_score":0.04688099,"about_ca_system_score_codex":0.000021682787,"about_ca_system_score_gemma":0.00009176032,"threshold_uncertainty_score":0.6210803},"labels":[],"label_agreement":null},{"id":"W3030624365","doi":"10.1016/j.gene.2019.100026","title":"The Y-chromosome of the Soliga, an ancient forest-dwelling tribe of South India","year":2020,"lang":"en","type":"article","venue":"Gene","topic":"Forensic and Genetic Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"","keywords":"Tribe; Haplogroup; Caste; Asian Indian; Indian subcontinent; Biology; Population; Haplotype; Ethnology; Geography; Immigration; Demography; Archaeology; Genetics; Anthropology; Genotype; History","score_opus":0.018447829084369736,"score_gpt":0.2541179009219847,"score_spread":0.23567007183761499,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3030624365","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9975439,0.0011874505,0.0004285412,0.00029474116,0.000074994365,0.00015680499,0.000026978329,0.0000021275512,0.0002845171],"genre_scores_gemma":[0.99916524,0.00010936292,0.00023124632,0.00019437801,0.00015131582,0.000005361279,0.000015243357,0.000009811142,0.00011806897],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9992048,0.00005503107,0.00018059177,0.00017068986,0.00019986136,0.00018902757],"domain_scores_gemma":[0.9993629,0.000010231031,0.000086477514,0.00038293758,0.00008507563,0.00007239816],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001954255,0.00007240525,0.00009725961,0.000007977092,0.000083037296,0.000008191102,0.0003630577,0.00006279287,0.0000067775345],"category_scores_gemma":[0.00008050547,0.000041542284,0.00008771268,0.00010922841,0.00022251866,0.000001001832,0.00016394055,0.00006406327,0.000003001064],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000077579585,0.000019806492,0.004220173,0.000017676943,0.000035812584,5.914584e-7,0.00053242396,0.0008025571,0.99111617,0.00012357922,0.0007339219,0.0023197227],"study_design_scores_gemma":[0.0002618744,0.00033862487,0.009232107,0.00000437844,0.0000093550525,0.0000018044016,0.00024048123,0.00043759527,0.9842386,0.00010648591,0.005069878,0.00005881122],"about_ca_topic_score_codex":0.000009580166,"about_ca_topic_score_gemma":0.0000120675,"teacher_disagreement_score":0.0068775504,"about_ca_system_score_codex":0.0000027556398,"about_ca_system_score_gemma":0.000110300934,"threshold_uncertainty_score":0.16940452},"labels":[],"label_agreement":null},{"id":"W3042955428","doi":"10.1016/j.gene.2020.144955","title":"Cyclin B protein undergoes increased expression and nuclear relocation during oocyte meiotic maturation of the freshwater prawn Macrobrachium rosenbergii and the Chinese mitten crab Eriocheir sinensis","year":2020,"lang":"en","type":"article","venue":"Gene","topic":"Epigenetics and DNA Methylation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":9,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ministry of Agriculture","funders":"National Natural Science Foundation of China","keywords":"Biology; Macrobrachium rosenbergii; Eriocheir; Prawn; Chinese mitten crab; Fishery; Oocyte; Cell biology; Myogenic regulatory factors; Decapoda; Freshwater crab; Anatomy; Molecular biology; Embryo; Myocyte; MyoD; Myogenesis; Crustacean","score_opus":0.003392744754263878,"score_gpt":0.18745572018476017,"score_spread":0.1840629754304963,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3042955428","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99598336,0.0014191103,0.00030054236,0.001826945,0.00003949936,0.00036516247,0.000012025406,0.000007403846,0.000045959532],"genre_scores_gemma":[0.9984173,0.00017230098,0.0009808164,0.00017311604,0.00013154653,0.000012536339,0.000039725102,0.000018393857,0.000054256732],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99921006,0.00016267586,0.00019389568,0.00023003572,0.00010550464,0.00009781913],"domain_scores_gemma":[0.99952704,0.000014734998,0.00013548807,0.00022798782,0.000049857652,0.000044875847],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001484536,0.00011596229,0.00011430087,0.000013546851,0.00015896039,0.0000372042,0.00009031773,0.000092987684,0.000004699773],"category_scores_gemma":[0.00015015279,0.00006614501,0.000041566975,0.00006158715,0.000117191725,0.0000064908786,0.00016267733,0.00006986813,7.343329e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0004717514,0.00001177184,0.0010224452,0.00004326637,0.000019171463,3.084689e-7,0.00040262428,0.00007464726,0.99773103,0.000037383208,0.000013000832,0.00017257487],"study_design_scores_gemma":[0.00097542006,0.000050857856,0.061713535,0.000021228063,0.000020460797,0.0000026630084,0.00007140012,0.00094567816,0.9356555,0.000231296,0.0002201703,0.00009183364],"about_ca_topic_score_codex":0.00005445126,"about_ca_topic_score_gemma":0.000050420316,"teacher_disagreement_score":0.062075596,"about_ca_system_score_codex":0.0000047365447,"about_ca_system_score_gemma":0.000016755712,"threshold_uncertainty_score":0.26973152},"labels":[],"label_agreement":null},{"id":"W3047346196","doi":"10.1016/j.gene.2020.145018","title":"Effects of 2-week HMB-FA supplementation with or without eccentric resistance exercise on expression of some genes related to muscle protein turnover and serum irisin and IGF-1 concentrations","year":2020,"lang":"en","type":"article","venue":"Gene","topic":"Adipose Tissue and Metabolism","field":"Medicine","cited_by":9,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Acadia University","funders":"","keywords":"Endocrinology; Internal medicine; FNDC5; Myostatin; Biology; Muscle hypertrophy; Gene expression; Protein turnover; Insulin resistance; Muscle atrophy; Skeletal muscle; Insulin; Medicine; Gene; Fibronectin; Protein biosynthesis; Biochemistry","score_opus":0.012176790825442473,"score_gpt":0.25676749652797126,"score_spread":0.24459070570252878,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3047346196","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9933339,0.004176541,0.00015640214,0.0007140546,0.000022531407,0.0015250678,0.000031639032,0.000017012788,0.000022883121],"genre_scores_gemma":[0.99492824,0.00044597258,0.0037392068,0.00015648088,0.00003628742,0.000041600353,0.00002155543,0.000017610431,0.0006130188],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9991995,0.000035379548,0.00021813379,0.00022230475,0.0001929656,0.0001317183],"domain_scores_gemma":[0.99952507,0.00002937722,0.000113401344,0.000118459175,0.00006268447,0.00015099012],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000051023748,0.00011329612,0.0002847634,0.00005290297,0.000038664464,0.0000059011522,0.000030383037,0.000046423876,0.00003329878],"category_scores_gemma":[0.000041829004,0.00008085294,0.000015339301,0.00019433038,0.000043605694,0.000084494,0.00002236725,0.000058534806,0.0000019751913],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0023442062,0.000109182314,0.0024101124,0.0005115024,0.00002528724,0.000021481868,0.0025774222,0.000008423249,0.98802835,0.000051367962,0.00032052354,0.003592166],"study_design_scores_gemma":[0.0038060276,0.0007992969,0.042562623,0.0005693964,0.00017599149,0.0000025523061,0.00017445801,0.000024856665,0.9506193,0.000019879451,0.0011549834,0.000090650254],"about_ca_topic_score_codex":0.000011242362,"about_ca_topic_score_gemma":0.000010835191,"teacher_disagreement_score":0.04015251,"about_ca_system_score_codex":0.000010224623,"about_ca_system_score_gemma":0.000053318297,"threshold_uncertainty_score":0.3297087},"labels":[],"label_agreement":null},{"id":"W3048065789","doi":"10.1016/j.gene.2020.145039","title":"RAGE against the stress: Mitochondrial suppression in hypometabolic hearts","year":2020,"lang":"en","type":"article","venue":"Gene","topic":"Advanced Glycation End Products research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":7,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Carleton University","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Biology; Cell biology; Intracellular; Glycation; HMGB1; Oxidative stress; Receptor; Endocrinology; Biochemistry","score_opus":0.01933593900851953,"score_gpt":0.2825545308412781,"score_spread":0.26321859183275853,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3048065789","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98796564,0.002939109,0.0013711613,0.0062869,0.0002595242,0.0003835549,0.000046083438,0.000014106792,0.00073391956],"genre_scores_gemma":[0.9953184,0.00055885635,0.0010130608,0.0014588954,0.0010373851,0.00003119582,0.00015588649,0.000017584041,0.00040870576],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99914086,0.00009768584,0.0001265437,0.00028967965,0.00014320096,0.00020201143],"domain_scores_gemma":[0.99952996,0.000010487531,0.000028871453,0.00031484143,0.000040318304,0.00007549619],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000068535504,0.00008443788,0.00008189448,0.000021331505,0.000055571607,0.000016093434,0.00021328845,0.000057946258,0.00003696378],"category_scores_gemma":[0.00020481634,0.000062195795,0.000033351967,0.00017105934,0.000045541274,0.000003747221,0.00014957531,0.000119676115,0.000032738728],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007857014,0.000019186444,0.00027458012,0.000006363126,0.0000061204073,0.0000033261454,0.00011567485,0.0012671576,0.99007016,0.000009588896,0.004219251,0.0039300187],"study_design_scores_gemma":[0.00045235458,0.00004867943,0.0008957344,0.0000033139727,0.0000016211599,0.0000016157413,0.00004600789,0.00009257002,0.7956136,0.00003156383,0.20273294,0.000079989026],"about_ca_topic_score_codex":0.0000047723324,"about_ca_topic_score_gemma":0.0000068207974,"teacher_disagreement_score":0.19851369,"about_ca_system_score_codex":0.0000052183213,"about_ca_system_score_gemma":0.000057801306,"threshold_uncertainty_score":0.2536271},"labels":[],"label_agreement":null},{"id":"W3083805389","doi":"10.1016/j.gene.2020.145092","title":"Correlation between genetic variation in thymine DNA glycosylase and smoking behavior","year":2020,"lang":"en","type":"article","venue":"Gene","topic":"DNA Repair Mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"Deanship of Scientific Research, King Saud University","keywords":"Biology; Single-nucleotide polymorphism; Genotype; International HapMap Project; Genotyping; Allele; Population; Genetics; Genetic variation; Gene; Environmental health; Medicine","score_opus":0.01288836416637865,"score_gpt":0.22961256000080085,"score_spread":0.2167241958344222,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3083805389","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98574126,0.00021673633,0.013620992,0.00010838835,0.000060045077,0.00017611509,0.000013855263,0.000013765795,0.000048867965],"genre_scores_gemma":[0.99698555,0.00003417745,0.0024279335,0.00016254748,0.00020851872,0.000019559882,0.000115699426,0.00001547915,0.000030556763],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9993619,0.000033366727,0.00014776565,0.00025762955,0.000079265774,0.000120072575],"domain_scores_gemma":[0.9997378,0.0000054851844,0.000048846458,0.00012148862,0.000018883948,0.00006747955],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00007296489,0.00008602332,0.00008555132,0.000024198245,0.000025299481,0.000012669879,0.000049490824,0.00010923081,0.0000132294],"category_scores_gemma":[0.000044865243,0.00009593576,0.000022011993,0.000071345996,0.000010931869,0.0000030884014,0.00007014268,0.00005142691,0.000005570966],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000017465136,0.000012881775,0.039085936,0.0000060389543,0.000007984663,0.000008420835,0.00010109247,0.000106058214,0.95381075,0.000008823101,0.000022779814,0.0068117427],"study_design_scores_gemma":[0.00072080665,0.0002634077,0.38385788,0.00000581182,0.000046839767,0.00000963311,0.00001485401,0.00135807,0.6129497,0.000056963814,0.0005538084,0.00016219543],"about_ca_topic_score_codex":0.0000118495955,"about_ca_topic_score_gemma":0.000008106536,"teacher_disagreement_score":0.34477195,"about_ca_system_score_codex":0.000010087606,"about_ca_system_score_gemma":0.00001862053,"threshold_uncertainty_score":0.39121464},"labels":[],"label_agreement":null},{"id":"W3105370234","doi":"10.1016/j.gene.2020.145309","title":"Effect of vitamin D on malignant behavior of non-small cell lung cancer cells","year":2020,"lang":"en","type":"article","venue":"Gene","topic":"Vitamin D Research Studies","field":"Medicine","cited_by":13,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"PI3K/AKT/mTOR pathway; Protein kinase B; Biology; Cisplatin; Cancer research; Cell growth; Apoptosis; Metastasis; Cancer; Chemotherapy; Biochemistry","score_opus":0.016246500867798813,"score_gpt":0.30893953602858987,"score_spread":0.29269303516079104,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3105370234","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9972305,0.00083548,0.000032878837,0.0002587311,0.00010177653,0.00084297126,0.000067458976,0.000013351767,0.0006167933],"genre_scores_gemma":[0.99843657,0.00035603892,0.00027903484,0.000099046374,0.00011839369,0.00011501709,0.000006183656,0.000023264838,0.0005664376],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9989193,0.000059346417,0.00022233615,0.0002249038,0.0003316632,0.00024244585],"domain_scores_gemma":[0.9993375,0.00011689237,0.00008399559,0.00022928871,0.00009330427,0.00013902182],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00019434156,0.00014097076,0.00045022563,0.00006177998,0.000023288752,0.000002117773,0.00011229312,0.000056063785,0.00010951443],"category_scores_gemma":[0.00005521576,0.00010028937,0.00011605022,0.00017191317,0.000071566275,0.000010691265,0.00010649177,0.00013663486,0.000020616057],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00017314382,0.00012938713,0.024089428,0.0018264899,0.00006587328,0.000087710905,0.0004935685,0.000024879666,0.9673787,3.2026458e-7,0.0028444387,0.0028860783],"study_design_scores_gemma":[0.0017038713,0.002729338,0.028046887,0.0001895931,0.00027549715,0.0000010930836,0.00004178001,0.00016887752,0.9666843,5.976803e-8,0.00008381226,0.0000749107],"about_ca_topic_score_codex":0.000094127994,"about_ca_topic_score_gemma":0.0000044651197,"teacher_disagreement_score":0.0039574583,"about_ca_system_score_codex":0.00004333919,"about_ca_system_score_gemma":0.00007137143,"threshold_uncertainty_score":0.40896818},"labels":[],"label_agreement":null},{"id":"W3108778868","doi":"10.1016/j.gene.2020.145332","title":"Genome-wide expression analysis of a new class of lncRNAs driven by SINE B2","year":2020,"lang":"en","type":"article","venue":"Gene","topic":"Cancer-related molecular mechanisms research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":4,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; McGill University Health Centre","funders":"Canadian Institutes of Health Research; University of Southern California","keywords":"Biology; Gene; Locus (genetics); Genetics; Genome; Promoter; RNA; Gene expression; RNA polymerase II; Long non-coding RNA; Messenger RNA; Molecular biology; Computational biology","score_opus":0.012894057733272337,"score_gpt":0.2595106410584459,"score_spread":0.24661658332517356,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3108778868","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8944174,0.0029702235,0.10131751,0.00054628984,0.00003371152,0.0002099206,0.00014429358,0.000009468758,0.00035118844],"genre_scores_gemma":[0.9965905,0.00042795143,0.0017104049,0.0002522698,0.00008586502,0.000005954391,0.0004993568,0.000022759164,0.00040493926],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99890715,0.00005118501,0.00026064343,0.00033317987,0.0002529664,0.00019485128],"domain_scores_gemma":[0.99921036,0.000007617143,0.00012916607,0.0003694277,0.000108178116,0.0001752614],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00007120411,0.000118700176,0.00027471693,0.00008727217,0.000020620459,0.0000059371723,0.00026217903,0.00014901318,0.00013905717],"category_scores_gemma":[0.00009215877,0.000119192715,0.00020354029,0.00051233766,0.000041597967,0.0000019471415,0.00020826889,0.00008487173,0.000004522641],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013564018,0.00003060886,0.00016917131,0.000017712573,0.0005072615,0.0000026110715,0.00007770928,0.0034827348,0.9917572,0.0000027647213,0.0033161913,0.0005003822],"study_design_scores_gemma":[0.00048632515,0.00027998624,0.00037507195,0.000005701613,0.00018410145,4.928214e-7,0.000024217548,0.0006411699,0.97844553,0.000005408954,0.019444875,0.00010712171],"about_ca_topic_score_codex":0.000046545316,"about_ca_topic_score_gemma":0.000015207815,"teacher_disagreement_score":0.102173105,"about_ca_system_score_codex":0.000014580897,"about_ca_system_score_gemma":0.00012688249,"threshold_uncertainty_score":0.48605376},"labels":[],"label_agreement":null},{"id":"W3112645428","doi":"10.1016/j.gene.2020.145368","title":"Recognition of plausible therapeutic agents to combat COVID-19: An omics data based combined approach","year":2020,"lang":"en","type":"article","venue":"Gene","topic":"SARS-CoV-2 and COVID-19 Research","field":"Medicine","cited_by":21,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba","funders":"Ministerio de Ciencia y Tecnología","keywords":"Biology; Gene; Coronavirus; Genome; In silico; Computational biology; Virology; Gene silencing; Drug repositioning; RNA polymerase; Genetics; RNA; Bioinformatics; Coronavirus disease 2019 (COVID-19); Disease; Drug; Infectious disease (medical specialty); Pharmacology; Medicine","score_opus":0.31861454471786105,"score_gpt":0.40820476640726344,"score_spread":0.0895902216894024,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3112645428","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9648055,0.00015523659,0.027627561,0.0043691145,0.00008160391,0.0013575703,0.00044948066,0.00013533441,0.0010186116],"genre_scores_gemma":[0.7223096,0.0000036449126,0.0054080486,0.2712117,0.00011354236,0.00003189364,0.0008813788,0.00003312882,0.000007038634],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9984403,0.00010884345,0.00026420187,0.0004778562,0.00044198922,0.00026678797],"domain_scores_gemma":[0.9987233,0.00007813079,0.000062340034,0.0007116648,0.00010593768,0.00031859783],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00040546266,0.00014296152,0.00030683892,0.00012111466,0.000064322885,0.00002285315,0.00045388262,0.00009211897,0.0001130209],"category_scores_gemma":[0.0004105237,0.00013315251,0.000047795435,0.00048331087,0.000055239438,0.00008782336,0.00018082446,0.0001654351,0.00008705968],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0062336433,0.0017509608,0.024333352,0.0011404617,0.0002705814,0.00007003094,0.0013868593,0.00009680838,0.93548745,0.000050133818,0.007970705,0.021208987],"study_design_scores_gemma":[0.013684033,0.0035933019,0.0047709295,0.000051658277,0.00030954924,0.00002306057,0.0006164021,0.19378649,0.697073,0.00026526133,0.08530185,0.00052448205],"about_ca_topic_score_codex":0.00014512977,"about_ca_topic_score_gemma":0.000012422615,"teacher_disagreement_score":0.2668426,"about_ca_system_score_codex":0.000075335134,"about_ca_system_score_gemma":0.0007391561,"threshold_uncertainty_score":0.5429802},"labels":[],"label_agreement":null},{"id":"W3130482221","doi":"10.1016/j.gene.2021.145509","title":"Imprints of selection in peripheral and ecologically marginal central-eastern European Scots pine populations","year":2021,"lang":"en","type":"article","venue":"Gene","topic":"Genetic diversity and population structure","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université du Québec en Abitibi-Témiscamingue","funders":"","keywords":"Biology; Scots pine; Local adaptation; Evolutionary biology; Selection (genetic algorithm); Natural selection; Genetic diversity; Genetic variation; Ecological selection; Ecology; Adaptation (eye); Range (aeronautics); Population; Genetics; Gene; Botany","score_opus":0.0156814908830362,"score_gpt":0.2349309948665908,"score_spread":0.2192495039835546,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3130482221","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9981668,0.00015280962,0.00083517196,0.00007078513,0.000066954985,0.000043850687,0.000011417714,0.0000028457707,0.0006493764],"genre_scores_gemma":[0.99551237,0.00004956995,0.0037609271,0.000075983095,0.000058124213,5.029256e-7,0.000099378434,0.000004073691,0.0004390918],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99952316,0.000064431115,0.00010576885,0.00015589775,0.000048769838,0.000101964106],"domain_scores_gemma":[0.9998146,0.0000010516181,0.00003559256,0.00006416937,0.00004753208,0.000037022284],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00004568214,0.000056132547,0.000065675944,0.000014373394,0.000031229738,0.000009062345,0.000039394334,0.000049264894,0.000121144396],"category_scores_gemma":[0.000016967833,0.000059099446,0.000023222881,0.00006258317,0.000019881361,0.0000020142618,0.000067175715,0.00003671009,0.0000016893666],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000021546812,0.000022957294,0.48405164,0.0000075502976,0.000008903074,0.000004545349,0.000042405933,0.00087286654,0.5117091,0.000049138915,0.000052176103,0.0031571707],"study_design_scores_gemma":[0.00035573848,0.000054015673,0.95851433,0.000003437769,0.000006249114,0.000024614566,0.000023111203,0.00009906751,0.03941625,0.00007922618,0.0013619966,0.0000619456],"about_ca_topic_score_codex":0.000014220846,"about_ca_topic_score_gemma":0.00017377136,"teacher_disagreement_score":0.4744627,"about_ca_system_score_codex":0.0000060538428,"about_ca_system_score_gemma":0.000023185772,"threshold_uncertainty_score":0.24100055},"labels":[],"label_agreement":null},{"id":"W3132945772","doi":"10.1016/j.gene.2021.145538","title":"No association between dopaminergic polymorphisms and response to treatment of binge-eating disorder","year":2021,"lang":"en","type":"article","venue":"Gene","topic":"Eating Disorders and Behaviors","field":"Psychology","cited_by":7,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University; University of Ottawa; Children's Hospital of Eastern Ontario","funders":"Canadian Institutes of Health Research; Ontario Mental Health Foundation","keywords":"rs4680; Obesity; Binge eating; Anthropometry; Binge-eating disorder; Single-nucleotide polymorphism; Dopaminergic; Biology; Body mass index; Internal medicine; Genotype; Medicine; Eating disorders; Genetics; Psychiatry; Dopamine; Gene; Bulimia nervosa","score_opus":0.020437926239473957,"score_gpt":0.30221441212222067,"score_spread":0.28177648588274673,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3132945772","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9973773,0.0007931056,0.000040011022,0.00038715667,0.00017286402,0.000105179206,0.000035397356,0.000020863388,0.0010681747],"genre_scores_gemma":[0.981675,0.000021498448,0.0009598958,0.00005355686,0.00008851075,0.000025614156,0.00003294888,0.000015652851,0.017127274],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99916065,0.00014753152,0.00018809641,0.00021868729,0.00010586202,0.00017914799],"domain_scores_gemma":[0.999426,0.00018169428,0.000092642884,0.00018227893,0.00006363235,0.00005375659],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015365375,0.0000950565,0.00018533054,0.000056491863,0.00005811699,0.000012289712,0.000036021356,0.000075979355,0.00026398923],"category_scores_gemma":[0.00008906114,0.000089282556,0.000045013043,0.00017555997,0.000010902575,0.00001606026,0.000023305272,0.0000308354,0.000059933573],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000079693855,0.0002170448,0.88751984,0.0000025962856,0.000068645546,0.000011765138,0.0019684657,0.000004238333,0.083628535,0.000012178552,0.00016624732,0.02632078],"study_design_scores_gemma":[0.0010664223,0.0008474818,0.9866749,0.000013607975,0.00009254619,0.0000029076318,0.0004192159,0.0000027657022,0.006076142,0.000017667708,0.004651636,0.00013467605],"about_ca_topic_score_codex":0.00037025224,"about_ca_topic_score_gemma":0.00005501311,"teacher_disagreement_score":0.09915512,"about_ca_system_score_codex":0.0000685054,"about_ca_system_score_gemma":0.000025381132,"threshold_uncertainty_score":0.36408368},"labels":[],"label_agreement":null},{"id":"W3133631343","doi":"10.1016/j.gene.2021.145542","title":"Conditioned media derived from mesenchymal stem cells induces apoptosis and decreases cell viability and proliferation in squamous carcinoma cell lines","year":2021,"lang":"en","type":"article","venue":"Gene","topic":"Mesenchymal stem cell research","field":"Medicine","cited_by":16,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Sherbrooke","funders":"Tehran University of Medical Sciences and Health Services","keywords":"Biology; Mesenchymal stem cell; Apoptosis; Flow cytometry; Viability assay; Cell culture; Cell growth; Cell; Cancer research; Stem cell; Molecular biology; Andrology; Cell biology; Medicine; Biochemistry","score_opus":0.029807089035415978,"score_gpt":0.26200977074178516,"score_spread":0.23220268170636918,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3133631343","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99545103,0.0029163884,0.000036912763,0.0003360587,0.00010790955,0.0006748382,0.00006560899,0.000029298724,0.0003819265],"genre_scores_gemma":[0.9976778,0.0002546112,0.0012370906,0.000093130184,0.00018783497,0.000066960245,0.00020819028,0.000024227638,0.0002501715],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9978722,0.00030787918,0.00040774487,0.0006272805,0.00044217388,0.00034277272],"domain_scores_gemma":[0.9983108,0.0006521119,0.00008192022,0.00033174743,0.0002463641,0.00037705863],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003139802,0.00021983421,0.00043952704,0.0001269,0.00010058576,0.000066989545,0.00006799345,0.00019171525,0.0002669776],"category_scores_gemma":[0.00018541527,0.00020230762,0.0000457817,0.00026155903,0.00012710871,0.00011548539,0.000134372,0.0002336502,0.000015986674],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001341397,0.00024912515,0.109082304,0.00023949363,0.000009989596,0.00009398879,0.0008652776,0.0000036595159,0.8884179,0.0000019438642,0.00006034357,0.00084184523],"study_design_scores_gemma":[0.001945977,0.00013413843,0.14058305,0.000028264956,0.000053393494,0.000014565621,0.0008544026,0.00038699442,0.85575163,0.000062675164,0.000030260644,0.00015463143],"about_ca_topic_score_codex":0.00053590327,"about_ca_topic_score_gemma":0.00023550306,"teacher_disagreement_score":0.032666244,"about_ca_system_score_codex":0.00007708819,"about_ca_system_score_gemma":0.0003221949,"threshold_uncertainty_score":0.8249866},"labels":[],"label_agreement":null},{"id":"W3156208689","doi":"10.1016/j.gene.2021.145671","title":"Coordinated expression of Jumonji and AHCY under OCT transcription factor control to regulate gene methylation in wood frogs during anoxia","year":2021,"lang":"en","type":"article","venue":"Gene","topic":"Epigenetics and DNA Methylation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":9,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Carleton University","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Biology; Transcription factor; Skeletal muscle; Gene expression; Methionine; Gene; Biochemistry; Molecular biology; Cell biology; Endocrinology; Amino acid","score_opus":0.01000879359213445,"score_gpt":0.24114228383649053,"score_spread":0.2311334902443561,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3156208689","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9776254,0.004500085,0.01742277,0.000096855576,0.00008075111,0.00019278374,0.000037844653,0.000006586817,0.000036912814],"genre_scores_gemma":[0.99739087,0.00048639043,0.0016797965,0.000034754776,0.000056726247,0.000011837036,0.0001357414,0.000018006822,0.00018590025],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99902284,0.000110603214,0.00026953433,0.00032625606,0.00010827266,0.00016250757],"domain_scores_gemma":[0.99950993,0.000009836615,0.0000776084,0.00021474142,0.00011566379,0.000072200666],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012502189,0.00012399652,0.0001785367,0.000074375916,0.00003991455,0.000014934946,0.000051431387,0.00015710533,0.000022755385],"category_scores_gemma":[0.00004084716,0.00012817983,0.00004965541,0.00013847693,0.000018389153,0.0000066170037,0.000035484656,0.000052285974,0.0000012147026],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012024416,0.000039169237,0.0025117842,0.000020567935,0.000018490506,0.0000022677293,0.00009208938,0.001815731,0.9937059,0.0000034242973,0.0000039403303,0.0016663593],"study_design_scores_gemma":[0.0012362776,0.00008687719,0.100334905,0.000021717902,0.000013604844,0.0000017601599,0.000025823412,0.000112152455,0.8977589,0.0001097844,0.00017333153,0.00012489532],"about_ca_topic_score_codex":0.000015150292,"about_ca_topic_score_gemma":0.000031602813,"teacher_disagreement_score":0.09782312,"about_ca_system_score_codex":0.000017706443,"about_ca_system_score_gemma":0.000033294506,"threshold_uncertainty_score":0.5227022},"labels":[],"label_agreement":null},{"id":"W3163265551","doi":"10.1016/j.gene.2021.145725","title":"The stress responsive gene ankrd1a is dynamically regulated during skeletal muscle development and upregulated following cardiac injury in border zone cardiomyocytes in adult zebrafish","year":2021,"lang":"en","type":"article","venue":"Gene","topic":"Congenital heart defects research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":14,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Ministarstvo Prosvete, Nauke i Tehnološkog Razvoja; Max-Planck-Gesellschaft; Fondation Leducq; Deutsche Forschungsgemeinschaft; International Union of Biochemistry and Molecular Biology","keywords":"Zebrafish; Downregulation and upregulation; Biology; Cell biology; Cardiac muscle; Skeletal muscle; Myocyte; Sarcomere; Reporter gene; Gene expression; Endocrinology; Gene; Genetics","score_opus":0.0041219796740951916,"score_gpt":0.25100952375907964,"score_spread":0.24688754408498445,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3163265551","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9950349,0.004237905,0.000010093808,0.00016835725,0.00010707979,0.0003296245,0.00004488793,0.000013304986,0.00005387246],"genre_scores_gemma":[0.9979744,0.00052155805,0.0005090519,0.000048907306,0.000054767715,0.000058427886,0.00015841295,0.000037065456,0.00063738704],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9979541,0.00027563365,0.00034645406,0.0005932045,0.00028941684,0.0005412143],"domain_scores_gemma":[0.9991402,0.000043919987,0.000037762813,0.00047513298,0.0001899506,0.00011300254],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00031760335,0.00021181178,0.00027003625,0.000099817036,0.00017268753,0.0000721277,0.0001592279,0.00020537492,0.0000071476816],"category_scores_gemma":[0.00018142555,0.00020216033,0.00011696646,0.0003807052,0.000077526114,0.00000932765,0.0004894326,0.00020209225,0.000003649391],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00017874145,0.00003844331,0.00434006,0.000028248478,0.00016380135,0.00018931637,0.00022080589,0.000036628244,0.9662218,0.0000012406592,0.000018380335,0.02856252],"study_design_scores_gemma":[0.00081225607,0.00004461216,0.19597988,0.000053477765,0.000010737126,0.000014455167,0.00015848667,0.00012551395,0.8012198,0.000006527387,0.0013466098,0.0002276513],"about_ca_topic_score_codex":0.00009367148,"about_ca_topic_score_gemma":0.00080843846,"teacher_disagreement_score":0.19163983,"about_ca_system_score_codex":0.000092308714,"about_ca_system_score_gemma":0.00030801297,"threshold_uncertainty_score":0.8243859},"labels":[],"label_agreement":null},{"id":"W3174068094","doi":"10.1016/j.gene.2021.145796","title":"Up-down regulation of HIF-1α in cancer progression","year":2021,"lang":"en","type":"review","venue":"Gene","topic":"Cancer, Hypoxia, and Metabolism","field":"Biochemistry, Genetics and Molecular Biology","cited_by":281,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"Biology; Angiogenesis; PI3K/AKT/mTOR pathway; Cancer cell; Cancer research; Transcription factor; Protein kinase B; Cancer; Tumor progression; Metastasis; HIF1A; Signal transduction; Mdm2; Hypoxia-inducible factors; Cell biology; Gene; Genetics","score_opus":0.03169791329139829,"score_gpt":0.3583391424731413,"score_spread":0.326641229181743,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3174068094","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00044952243,0.99731755,0.000027202026,0.000010775331,0.0015781644,0.0003491149,0.00007549549,0.0000040093587,0.00018818365],"genre_scores_gemma":[0.00006438172,0.9951016,0.00034639702,0.000017976141,0.0016968631,0.0001397573,0.0008716029,0.00003328221,0.0017281438],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.998814,0.00009329092,0.0003863287,0.0003881098,0.00013358032,0.00018469998],"domain_scores_gemma":[0.99921024,0.0000049351506,0.00025823142,0.00040043,0.000080191356,0.000045947636],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013602496,0.0002089939,0.00072849623,0.000072084214,0.000020523878,0.000008129276,0.00014342836,0.00035787738,0.00009486861],"category_scores_gemma":[0.000028741517,0.0001815887,0.00026114524,0.00020827315,0.000034590823,0.0000016295166,0.00010655566,0.000107496926,0.00000279861],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000007192874,0.000028205293,0.000004330583,0.0015552551,0.000052422027,6.103348e-7,0.0000132910145,0.0000035574449,0.023969848,0.0000099772105,0.0032803454,0.97107494],"study_design_scores_gemma":[0.00020839919,0.000025944415,0.000030438703,0.0021430878,0.0001474411,0.000009199758,0.0000039739048,0.0000010492959,0.0138227455,0.000005176067,0.9834181,0.0001844572],"about_ca_topic_score_codex":0.000045970555,"about_ca_topic_score_gemma":0.000098354736,"teacher_disagreement_score":0.98013777,"about_ca_system_score_codex":0.00002641363,"about_ca_system_score_gemma":0.0004983978,"threshold_uncertainty_score":0.74049723},"labels":[],"label_agreement":null},{"id":"W3183295532","doi":"10.1016/j.gene.2021.145848","title":"Novel cross-regulation interactions between dlx genes in larval zebrafish","year":2021,"lang":"en","type":"article","venue":"Gene","topic":"Zebrafish Biomedical Research Applications","field":"Biochemistry, Genetics and Molecular Biology","cited_by":5,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Ottawa","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Zebrafish; Biology; Enhancer; Homeobox; Genetics; Gene; Locus (genetics); CRISPR; Transcription factor; Mutant; Vertebrate; Transcription (linguistics); Regulation of gene expression","score_opus":0.02536159739012095,"score_gpt":0.341493036761189,"score_spread":0.316131439371068,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3183295532","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9852536,0.00027745205,0.011994525,0.0013261916,0.00008904255,0.00013943054,0.00012066138,0.000015324396,0.0007837786],"genre_scores_gemma":[0.9912249,0.000065295666,0.004844445,0.00020155078,0.0005512387,0.000064792206,0.0013596893,0.000018702105,0.0016694021],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9989498,0.0000374926,0.00021686975,0.0003518066,0.00018727004,0.00025672003],"domain_scores_gemma":[0.9992805,0.000028857552,0.000040236613,0.00036630308,0.00015496522,0.00012913236],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001637013,0.00009371315,0.00010341192,0.0000572103,0.000075711905,0.000051084717,0.00016765336,0.00011646844,0.00015947635],"category_scores_gemma":[0.00024674748,0.00010230938,0.000063318286,0.0002788409,0.00009076277,0.0000073568253,0.00018659253,0.000118040196,0.000062367595],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000008688912,0.00008531995,0.014873605,0.0000054990896,0.000024440915,0.0000025337085,0.000008991251,0.000030817057,0.97731197,0.000062491774,0.000979245,0.00660642],"study_design_scores_gemma":[0.00040766428,0.000023355784,0.20240606,0.000005398532,0.000005095058,0.000013321709,0.000011406156,0.00007364939,0.72167367,0.00020536066,0.075073436,0.00010160513],"about_ca_topic_score_codex":0.000042719024,"about_ca_topic_score_gemma":0.00039129777,"teacher_disagreement_score":0.2556383,"about_ca_system_score_codex":0.00003256668,"about_ca_system_score_gemma":0.0001853883,"threshold_uncertainty_score":0.41720554},"labels":[],"label_agreement":null},{"id":"W3185863318","doi":"10.1016/j.gene.2021.145833","title":"The complete mitochondrial genome of Choroterpes (Euthralus) yixingensis (Ephemeroptera: Leptophlebiidae) and its mitochondrial protein-coding gene expression under imidacloprid stress","year":2021,"lang":"en","type":"article","venue":"Gene","topic":"Mosquito-borne diseases and control","field":"Medicine","cited_by":22,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Carleton University","funders":"","keywords":"Imidacloprid; Mayfly; Biology; Nymph; Neonicotinoid; Gene; Toxicology; Zoology; Ecology; Genetics; Pesticide","score_opus":0.016457660354710153,"score_gpt":0.2455503375945652,"score_spread":0.22909267723985505,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3185863318","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97887814,0.015528845,0.0016103045,0.0014914135,0.0008138915,0.0012568143,0.00019257148,0.00005076957,0.00017726139],"genre_scores_gemma":[0.99327946,0.00067292666,0.0026368666,0.0002507744,0.0021678992,0.000148224,0.000130816,0.000059291844,0.0006537479],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99748755,0.00014872552,0.0006045714,0.00066255353,0.00056084717,0.0005357645],"domain_scores_gemma":[0.9983132,0.000093637784,0.00024615804,0.00068991754,0.0003672823,0.0002897893],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00009991756,0.00034017782,0.0006003031,0.00006450213,0.00037602958,0.000101280784,0.00021801238,0.00015513676,0.00024488897],"category_scores_gemma":[0.00012674188,0.00025601388,0.00027378128,0.00018224398,0.00011027494,0.000099844576,0.00025890634,0.00023580265,0.00001440629],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00091131375,0.00012683283,0.0001311634,0.00013934638,0.00022915837,0.000071437134,0.00018896825,0.000045511006,0.99530643,0.00016762895,0.00012421905,0.0025579722],"study_design_scores_gemma":[0.004485005,0.00019958345,0.005572992,0.00025136207,0.00032497576,0.000050133305,0.00023976825,0.0004374691,0.98442894,0.00013192362,0.0035580462,0.00031982665],"about_ca_topic_score_codex":0.00002898642,"about_ca_topic_score_gemma":0.000021456784,"teacher_disagreement_score":0.014855918,"about_ca_system_score_codex":0.00005568147,"about_ca_system_score_gemma":0.00019828067,"threshold_uncertainty_score":0.9999892},"labels":[],"label_agreement":null},{"id":"W3186488732","doi":"10.1016/j.gene.2021.145842","title":"Mitogen-induced transcriptional programming in human fibroblasts","year":2021,"lang":"en","type":"article","venue":"Gene","topic":"Genomics and Chromatin Dynamics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":11,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"CancerCare Manitoba; University of Manitoba","funders":"Natural Sciences and Engineering Research Council of Canada; CancerCare Manitoba Foundation","keywords":"Biology; MAPK/ERK pathway; Mitogen-activated protein kinase; Molecular biology; Cell biology; Transcriptome; Repressor; Kinase; Gene; Epidermal growth factor; Signal transduction; Transcription factor; Phorbol; Gene expression; Cell culture; Protein kinase C; Genetics","score_opus":0.011155147623059023,"score_gpt":0.23957686036413162,"score_spread":0.2284217127410726,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3186488732","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9985834,0.00037257955,0.00044722608,0.000075799144,0.00013637345,0.000068094865,0.000010516082,0.0000058786554,0.00030014344],"genre_scores_gemma":[0.99540615,0.000026388307,0.0033424227,0.00008273765,0.00013885724,0.000014757038,0.00036015312,0.000015409401,0.00061311515],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99934334,0.000022682332,0.00014633668,0.00023916781,0.00006781432,0.00018067562],"domain_scores_gemma":[0.9997027,0.0000015673065,0.000025587318,0.00018631775,0.000041251948,0.000042602784],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000057351077,0.000087262895,0.00008024168,0.000020503909,0.000046334226,0.00002091618,0.0000853325,0.00009293191,0.000027925473],"category_scores_gemma":[0.0000083440045,0.0001003681,0.000062653904,0.000066659224,0.0000137743955,0.0000012396463,0.000043808584,0.000053814154,0.0000048525612],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000005719091,0.00004522167,0.0007825619,0.000010100251,0.000015088329,0.000009954026,0.000044964443,0.0000949302,0.996635,0.00013987799,0.000057381938,0.0021591596],"study_design_scores_gemma":[0.0005795698,0.000080649996,0.006907144,0.000009166769,0.0000055699365,0.000037570353,0.00006859408,0.00010434689,0.982551,0.00015029639,0.0093435235,0.00016257909],"about_ca_topic_score_codex":0.000009391993,"about_ca_topic_score_gemma":0.00022975769,"teacher_disagreement_score":0.014084051,"about_ca_system_score_codex":0.000013924301,"about_ca_system_score_gemma":0.00007075136,"threshold_uncertainty_score":0.40928924},"labels":[],"label_agreement":null},{"id":"W3192762870","doi":"10.1016/j.gene.2021.145871","title":"Chloroplast genome analysis of Chrysotila dentata","year":2021,"lang":"en","type":"article","venue":"Gene","topic":"Marine and coastal plant biology","field":"Earth and Planetary Sciences","cited_by":9,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Lakehead University; University of Toronto","funders":"Natural Sciences and Engineering Research Council of Canada; China Postdoctoral Science Foundation; Lakehead University","keywords":"Biology; Genome; Chloroplast; Chloroplast DNA; Phylogenetic tree; Gene; Genetics; Inverted repeat; Genome size; Evolutionary biology","score_opus":0.01236386919851844,"score_gpt":0.19868500965153274,"score_spread":0.1863211404530143,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3192762870","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9755805,0.0005425437,0.0001130867,0.00004281406,0.00009072707,0.000018020617,0.00041793135,0.000007709301,0.023186645],"genre_scores_gemma":[0.9944676,0.00019190209,0.0002667926,0.00014866305,0.000043033517,1.3235076e-7,0.0021640053,7.7360295e-7,0.002717062],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99949765,0.000023809105,0.00012236217,0.00014689802,0.00008075381,0.00012849549],"domain_scores_gemma":[0.99971306,0.000031701704,0.00003570114,0.00014514381,0.000026608172,0.00004775497],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.000059801678,0.00005249482,0.00016103579,0.00007725781,0.000026852485,0.0000091810325,0.00009423254,0.000029226634,0.0122798905],"category_scores_gemma":[0.000009349996,0.000044095555,0.00006993577,0.00048134883,0.000023711105,0.0000291163,0.000021714388,0.000033256027,0.000103841696],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000032094264,0.00002111088,0.90124404,0.000010972114,0.0006108958,0.00014215344,0.00006663086,0.0033809429,0.024482349,0.00003073927,0.00015146937,0.06982659],"study_design_scores_gemma":[0.00008306418,0.00003791662,0.97539115,7.087063e-7,0.00019374918,0.00002802631,0.00006350606,0.001339245,0.005966257,0.000028484365,0.016789109,0.000078766745],"about_ca_topic_score_codex":0.002467028,"about_ca_topic_score_gemma":0.028653553,"teacher_disagreement_score":0.07414711,"about_ca_system_score_codex":6.6539974e-7,"about_ca_system_score_gemma":0.00002901833,"threshold_uncertainty_score":0.989071},"labels":[],"label_agreement":null},{"id":"W3209904866","doi":"10.1016/j.gene.2021.146041","title":"Dual activity of Meloidogyne incognita-regulated Musa acuminata Pathogenesis-related-10 (MaPR-10) gene","year":2021,"lang":"en","type":"article","venue":"Gene","topic":"Nematode management and characterization studies","field":"Agricultural and Biological Sciences","cited_by":15,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"Universiti Malaya; Ministry of Higher Education, Malaysia","keywords":"Biology; Pathogenesis-related protein; Gene; Gene family; Meloidogyne incognita; Genetics; Ribonuclease; Microbiology; Molecular biology; Gene expression; RNA","score_opus":0.020057169977614902,"score_gpt":0.2148518654088763,"score_spread":0.1947946954312614,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3209904866","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99689275,0.0003999726,0.000006765582,0.0008415607,0.00014826488,0.00012895706,0.00015237238,0.000069543,0.0013598268],"genre_scores_gemma":[0.9899761,0.0001922723,0.00009166446,0.00008773872,0.00012275262,0.000013891883,0.0004687859,0.0000021421324,0.009044633],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9987578,0.00009502725,0.00028374122,0.00036160075,0.00025673455,0.00024511275],"domain_scores_gemma":[0.9993594,0.00006510845,0.00017186454,0.000112246125,0.00022813091,0.000063220614],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00016848349,0.00018014647,0.0003076776,0.000018622437,0.00018301937,0.000035034478,0.0001526744,0.0001055143,0.0036430098],"category_scores_gemma":[0.000044631513,0.00008309318,0.00011910818,0.0005817689,0.00006651771,0.000115484254,0.0003379083,0.00005750326,0.00013772884],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000028526694,0.0001299117,0.00060404814,0.0000129875525,0.0000904439,0.000029567207,0.000053797845,0.0000022179293,0.9483284,0.000033195767,0.0006860968,0.0500008],"study_design_scores_gemma":[0.00029102163,0.00008051826,0.17218149,0.000014099786,0.00007753847,0.000010845911,0.00016344165,0.00003224183,0.81464124,0.000108679866,0.012158629,0.00024026998],"about_ca_topic_score_codex":0.000016563068,"about_ca_topic_score_gemma":0.000049975926,"teacher_disagreement_score":0.17157744,"about_ca_system_score_codex":0.000013045761,"about_ca_system_score_gemma":0.000010272177,"threshold_uncertainty_score":0.9972678},"labels":[],"label_agreement":null},{"id":"W4200427067","doi":"10.1016/j.gene.2021.146111","title":"Unraveling molecular mechanism underlying biomaterial and stem cells interaction during cell fate commitment using high throughput data analysis","year":2021,"lang":"en","type":"article","venue":"Gene","topic":"3D Printing in Biomedical Research","field":"Engineering","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Montreal Neurological Institute and Hospital; McGill University; Université de Sherbrooke","funders":"","keywords":"Stem cell; Biology; Context (archaeology); Cellular differentiation; Regenerative medicine; Cell biology; Computational biology; Genetics; Gene","score_opus":0.07612227440555083,"score_gpt":0.311866019350759,"score_spread":0.2357437449452082,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4200427067","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8108291,0.00026348504,0.18816228,0.000023022136,0.00048696282,0.00007920668,0.00003437137,0.00009203839,0.000029510496],"genre_scores_gemma":[0.97408146,0.00019150236,0.025506474,0.000011808181,0.00006739517,0.0000031176103,0.0000843477,0.00003573116,0.000018192164],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9985825,0.000079408965,0.00027604983,0.0004148265,0.0003113839,0.00033584112],"domain_scores_gemma":[0.9991313,0.000046675537,0.00004208359,0.0006257448,0.000043923854,0.00011022441],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002939479,0.00015758057,0.00023091299,0.00017833829,0.000117232354,0.00017708147,0.00023966386,0.000090821115,0.00007148744],"category_scores_gemma":[0.000009581166,0.00017317063,0.00004454679,0.00047438403,0.000022768376,0.00013334806,0.0006303266,0.00014497331,0.000012557177],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000041663006,0.000013407331,0.000021604797,0.00013896644,0.00030707722,0.000099122284,0.000081718026,0.018302618,0.9800573,0.000021658252,0.000002719255,0.0009496301],"study_design_scores_gemma":[0.00022239628,0.0000058909886,0.0000765123,0.000029881789,0.00014512282,0.000009233854,0.000116551084,0.20657341,0.79257935,0.00006533692,0.00004120849,0.00013509855],"about_ca_topic_score_codex":0.00012375451,"about_ca_topic_score_gemma":0.000010632841,"teacher_disagreement_score":0.1882708,"about_ca_system_score_codex":0.00015342464,"about_ca_system_score_gemma":0.000025752921,"threshold_uncertainty_score":0.70616937},"labels":[],"label_agreement":null},{"id":"W4210637514","doi":"10.1016/j.gene.2022.146236","title":"Pro- and anti-apoptotic microRNAs are differentially regulated during estivation in Xenopus laevis","year":2022,"lang":"en","type":"article","venue":"Gene","topic":"MicroRNA in disease regulation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":5,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Carleton University","funders":"","keywords":"Biology; microRNA; Aestivation; Xenopus; Apoptosis; Cell biology; Downregulation and upregulation; African clawed frog; Cell cycle; Skeletal muscle; Bioinformatics; Genetics; Anatomy; Gene; Ecology","score_opus":0.007264672800316292,"score_gpt":0.21306551767515483,"score_spread":0.20580084487483855,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4210637514","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99873084,0.00074650656,0.000062731204,0.000098758894,0.000071914954,0.00023843588,0.00002313576,0.00001365235,0.000014037899],"genre_scores_gemma":[0.99914557,0.000036321937,0.00017934655,0.000033376476,0.00006408232,0.0000326065,0.00028552208,0.000020305217,0.00020288888],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99920523,0.000069452086,0.00016483823,0.00029781472,0.0001000272,0.00016261557],"domain_scores_gemma":[0.9996318,0.000002648505,0.000094531504,0.0002016855,0.000028390055,0.000040925835],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00007830293,0.00010593331,0.00010375507,0.00006982339,0.00011337667,0.000017697113,0.00008399903,0.00005330779,0.00003453649],"category_scores_gemma":[0.000024235198,0.00012067906,0.000029041395,0.00011903032,0.000025429152,0.0000033533324,0.00018341608,0.00006494451,0.0000013292197],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000055373555,0.000051413346,0.016497267,0.00003285479,0.000018431972,0.000007022723,0.00003198548,0.0008932166,0.98216546,0.00000383244,0.00006178902,0.00018138146],"study_design_scores_gemma":[0.00051658315,0.000027039347,0.31912544,0.0000096794065,0.000009845067,0.000022187962,0.000018297838,0.00010301841,0.67977023,0.00002217569,0.00026456866,0.00011095815],"about_ca_topic_score_codex":0.000010812048,"about_ca_topic_score_gemma":0.000010174743,"teacher_disagreement_score":0.30262816,"about_ca_system_score_codex":0.00004092392,"about_ca_system_score_gemma":0.000030291329,"threshold_uncertainty_score":0.49211493},"labels":[],"label_agreement":null},{"id":"W4210647050","doi":"10.1016/j.gene.2022.146211","title":"Meta-analysis of microRNA profiling data does not reveal a consensus signature for B cell acute lymphoblastic leukemia","year":2022,"lang":"en","type":"review","venue":"Gene","topic":"MicroRNA in disease regulation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":10,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Memorial University of Newfoundland","funders":"","keywords":"microRNA; Biology; Computational biology; Gene expression profiling; Meta-analysis; Bioinformatics; Genetics; Gene; Gene expression; Internal medicine; Medicine","score_opus":0.0905908047714059,"score_gpt":0.32990587890387474,"score_spread":0.23931507413246883,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4210647050","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0006104538,0.96009994,0.00042408562,0.000010403471,0.0001413997,0.0011818035,0.037506375,0.000009770172,0.000015764992],"genre_scores_gemma":[0.00022018419,0.9127013,0.007645017,0.000069616406,0.00019859347,0.000320343,0.07708389,0.00010199822,0.0016590622],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9972488,0.0002470402,0.0008467351,0.0011204879,0.00023801532,0.0002988774],"domain_scores_gemma":[0.99665403,0.00017714046,0.0009873436,0.0019734714,0.00011891747,0.000089069836],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00049998245,0.00047154306,0.0022789168,0.00021854424,0.000095743315,0.000022103377,0.0008946985,0.00043100334,0.00018300161],"category_scores_gemma":[0.00013118242,0.00034955418,0.0023923859,0.00040996767,0.00007713663,0.0000021817768,0.0007212708,0.00015081582,0.0000025742975],"study_design_candidate":"meta_analysis","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014575434,0.00009672141,6.1459485e-7,0.0092578735,0.3313342,0.000017136734,0.000008748383,0.0002782492,0.6375875,0.0000035537312,0.005012253,0.01625741],"study_design_scores_gemma":[0.0001999436,0.00004487924,2.5331016e-7,0.000026685177,0.43653652,0.000010369466,0.0000036615645,0.00006434402,0.08235221,0.0000023349728,0.48043862,0.00032017357],"about_ca_topic_score_codex":0.000009188903,"about_ca_topic_score_gemma":0.0000090065305,"teacher_disagreement_score":0.55523527,"about_ca_system_score_codex":0.00011370995,"about_ca_system_score_gemma":0.0010309129,"threshold_uncertainty_score":0.99989563},"labels":[],"label_agreement":null},{"id":"W4211166256","doi":"10.1016/j.gene.2020.144874","title":"Apolipoprotein D","year":2020,"lang":"pl","type":"review","venue":"Gene","topic":"Drug Transport and Resistance Mechanisms","field":"Medicine","cited_by":112,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université du Québec à Montréal","funders":"National Institute of General Medical Sciences; Canadian Institutes of Health Research; National Institutes of Health","keywords":"Biology; Lipocalin; Lipid metabolism; Inflammation; Neuroprotection; Basigin; Biochemistry; Immunology; Neuroscience","score_opus":0.03677734187514479,"score_gpt":0.2962398148298105,"score_spread":0.2594624729546657,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4211166256","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000014523889,0.98748225,0.0010487329,0.0008995838,0.0019281576,0.0019090344,0.00021711004,0.00013286126,0.0063677304],"genre_scores_gemma":[0.00011314743,0.9721099,0.0019019834,0.00049275876,0.0037114767,0.00012838823,0.0007210708,0.00017077396,0.020650493],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9967166,0.000089210145,0.00095514243,0.0008715071,0.00064063625,0.00072687346],"domain_scores_gemma":[0.99811167,0.000028087738,0.0003348324,0.000799081,0.00007596747,0.0006503948],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00026694642,0.0007837413,0.0028670244,0.0001423829,0.00012273429,0.000031102787,0.0004282358,0.00064300676,0.002799519],"category_scores_gemma":[0.000036498026,0.000611096,0.0010524614,0.0005545252,0.000087438166,0.000030905776,0.00006276555,0.0008946395,0.008173535],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00005425224,0.00010888085,0.0000029620082,0.03018828,0.00062247296,0.001902866,0.00016660002,1.9839727e-7,0.00084700115,0.0005541016,0.0019644983,0.9635879],"study_design_scores_gemma":[0.00065723585,0.00018851065,0.00000751696,0.011439924,0.0029825023,0.00009912022,0.000026558142,0.0000037459736,0.0019031506,0.00008032245,0.9820416,0.00056983694],"about_ca_topic_score_codex":0.000034087218,"about_ca_topic_score_gemma":0.000013492082,"teacher_disagreement_score":0.9800771,"about_ca_system_score_codex":0.00016210228,"about_ca_system_score_gemma":0.0009246264,"threshold_uncertainty_score":0.999634},"labels":[],"label_agreement":null},{"id":"W4220879430","doi":"10.1016/j.gene.2022.146463","title":"The key role of differential broad H3K4me3 and H3K4ac domains in breast cancer","year":2022,"lang":"en","type":"article","venue":"Gene","topic":"Estrogen and related hormone effects","field":"Biochemistry, Genetics and Molecular Biology","cited_by":18,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba; CancerCare Manitoba","funders":"Agencia Nacional de Investigación y Desarrollo; Natural Sciences and Engineering Research Council of Canada; CancerCare Manitoba Foundation","keywords":"Biology; Key (lock); Breast cancer; H3K4me3; Computational biology; Differential (mechanical device); Cancer; Genetics; Ecology; Gene; Gene expression","score_opus":0.002061622216288715,"score_gpt":0.20259534053919406,"score_spread":0.20053371832290534,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4220879430","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99048346,0.008903484,0.00000513132,0.00020732745,0.00009496433,0.000091884656,0.000054277512,0.0000026746789,0.00015676557],"genre_scores_gemma":[0.9983953,0.0012597772,0.000013959317,0.000028934728,0.000062983185,0.000037461592,0.000024739034,0.000008676434,0.00016811583],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99948144,0.000062461324,0.000096041505,0.00014207493,0.00007909759,0.00013890756],"domain_scores_gemma":[0.99977285,0.000006808919,0.00003631514,0.00014202816,0.0000114616905,0.00003055902],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0000636633,0.00006687428,0.00007577201,0.000016642922,0.0001162657,0.0000058899222,0.00010140163,0.000047212947,0.000023738176],"category_scores_gemma":[0.0000030634533,0.000049944072,0.00003637192,0.000055713117,0.000055547014,8.071508e-7,0.00017467485,0.000092543785,5.146572e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015684143,0.000038059698,0.007848557,0.0000033130489,0.000039612132,0.000002231918,0.00008194709,0.00006457758,0.9829544,0.000045151388,0.00019918635,0.008566163],"study_design_scores_gemma":[0.0019442879,0.00031382008,0.08069053,0.000008141097,0.000043845583,0.00014292102,0.00028200969,0.00034598852,0.8979381,0.00020235137,0.01783432,0.00025369876],"about_ca_topic_score_codex":0.00011715891,"about_ca_topic_score_gemma":0.000033968478,"teacher_disagreement_score":0.08501627,"about_ca_system_score_codex":0.00001031805,"about_ca_system_score_gemma":0.000034253135,"threshold_uncertainty_score":0.20366602},"labels":[],"label_agreement":null},{"id":"W4224214683","doi":"10.1016/j.gene.2022.146505","title":"An overview of transcription in dinoflagellates","year":2022,"lang":"en","type":"review","venue":"Gene","topic":"Protist diversity and phylogeny","field":"Biochemistry, Genetics and Molecular Biology","cited_by":23,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Sherbrooke; Université de Montréal","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Biology; Dinoflagellate; Chromatin; Gene; Genome; Transcription (linguistics); Trans-splicing; Genetics; Histone; RNA splicing; Algae; Alternative splicing; Evolutionary biology; Computational biology; RNA; Ecology; Messenger RNA","score_opus":0.11509376729197701,"score_gpt":0.3455431199111581,"score_spread":0.2304493526191811,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4224214683","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0010646214,0.99819344,0.000011235868,0.0000012638902,0.00009873975,0.00023967802,0.00019994237,0.0000029626642,0.00018811465],"genre_scores_gemma":[0.00039515237,0.9979746,0.00008135372,0.000018442752,0.0000591318,0.000021359376,0.001356872,0.0000141255905,0.00007899424],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9992056,0.00015333801,0.00020401308,0.00024900463,0.00007443002,0.000113622555],"domain_scores_gemma":[0.9995692,0.000004768745,0.00009615705,0.00029135443,0.000008295898,0.000030246852],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015168471,0.00013743159,0.0004097884,0.000058627636,0.00002637868,0.000004250167,0.00027056792,0.00016533652,0.00020549285],"category_scores_gemma":[0.000005673986,0.00014011662,0.00020785267,0.00011237784,0.000022069313,0.00000136815,0.0000658052,0.00009751512,0.00000447027],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000019934289,0.00014856773,0.00007529962,0.008149087,0.00010169153,0.000012221861,0.000047292644,0.000010664968,0.018890502,0.000062584644,0.00016202452,0.97232014],"study_design_scores_gemma":[0.00010028463,0.0001491282,0.00003016982,0.00023925598,0.00009210032,0.000008448426,0.000005428755,4.5630244e-7,0.002586968,0.000025183597,0.99661237,0.00015020766],"about_ca_topic_score_codex":0.000024954927,"about_ca_topic_score_gemma":0.000015250974,"teacher_disagreement_score":0.99645036,"about_ca_system_score_codex":0.000015632959,"about_ca_system_score_gemma":0.00007740637,"threshold_uncertainty_score":0.571379},"labels":[],"label_agreement":null},{"id":"W4280530339","doi":"10.1016/j.gene.2022.146560","title":"The AGT epistasis pattern proposed a novel role for ZBED9 in regulating blood pressure: Tehran Cardiometabolic genetic study (TCGS)","year":2022,"lang":"en","type":"article","venue":"Gene","topic":"Genetic Associations and Epidemiology","field":"Biochemistry, Genetics and Molecular Biology","cited_by":7,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"Research Institute for Endocrine Sciences, Shahid Beheshti University of Medical Sciences","keywords":"Epistasis; Biology; Multifactor dimensionality reduction; Genetics; Allele; Single-nucleotide polymorphism; Gene; Missense mutation; Candidate gene; Blood pressure; Genetic association; Genotype; Locus (genetics); Endocrinology; Phenotype","score_opus":0.011903611405486757,"score_gpt":0.25253549295604005,"score_spread":0.2406318815505533,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4280530339","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9918364,0.0047631506,0.0014347633,0.00038137037,0.00018157522,0.0011788952,0.00015129382,0.000010967984,0.000061557985],"genre_scores_gemma":[0.99645346,0.00007110752,0.0016177912,0.00015218685,0.00024004342,0.0008280422,0.000100616446,0.000034862078,0.00050189934],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9981505,0.0003191062,0.00041794684,0.0004840921,0.00017644026,0.00045185784],"domain_scores_gemma":[0.99907964,0.00006693595,0.00018526983,0.00054501806,0.000070768845,0.000052345113],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010333445,0.00017163744,0.00027165908,0.00005880651,0.0005137597,0.000024775778,0.00036039,0.00007875076,0.000009131093],"category_scores_gemma":[0.00021473612,0.00014890547,0.00013719764,0.00020149237,0.000040454648,0.0000015083593,0.0003226933,0.000120274344,0.0000010951286],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00016751107,0.0012900956,0.27642807,0.000030327687,0.0016399033,0.000008551972,0.0013731181,0.0311063,0.62919974,0.000031608153,0.0011920291,0.057532743],"study_design_scores_gemma":[0.010018361,0.0026700115,0.795649,0.0000069500675,0.0011378257,0.00011788015,0.0058973795,0.004843735,0.039691232,0.0004462057,0.13843651,0.0010849063],"about_ca_topic_score_codex":0.00021010026,"about_ca_topic_score_gemma":0.00026402855,"teacher_disagreement_score":0.5895085,"about_ca_system_score_codex":0.000016481441,"about_ca_system_score_gemma":0.000090246904,"threshold_uncertainty_score":0.6072189},"labels":[],"label_agreement":null},{"id":"W4280575469","doi":"10.1016/j.gene.2022.146549","title":"Discovery and identification of genes involved in DNA damage repair in yeast","year":2022,"lang":"en","type":"article","venue":"Gene","topic":"Fungal and yeast genetics research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":5,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Agriculture and Agri-Food Canada; University of Ottawa; Carleton University","funders":"","keywords":"Biology; DNA repair; DNA damage; Homologous recombination; DNA repair protein XRCC4; Gene; Saccharomyces cerevisiae; Chromatin; Genetics; DNA; Nucleotide excision repair; Ku80; Non-homologous end joining; Cell biology; Computational biology; DNA-binding protein; Transcription factor","score_opus":0.01247177880842581,"score_gpt":0.2563057293022987,"score_spread":0.2438339504938729,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4280575469","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9979805,0.0016544991,0.000023945824,0.000053074324,0.00004322316,0.00010599514,0.00008068516,0.000002273132,0.00005585492],"genre_scores_gemma":[0.9988957,0.0002687396,0.00009148045,0.000025099456,0.0000273918,0.000034936245,0.00010155158,0.0000075299595,0.00054755976],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9993304,0.000074955446,0.00016795665,0.00020078964,0.000112488684,0.0001134101],"domain_scores_gemma":[0.9997325,0.0000037960924,0.000034190816,0.00019237421,0.000017378079,0.000019778961],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002675776,0.00005134032,0.00007107652,0.00007561154,0.000026003927,0.0000060189873,0.00010049905,0.000029866585,0.00000797289],"category_scores_gemma":[0.000021943632,0.00005520915,0.000025752355,0.00013628967,0.000038436763,0.000002822984,0.00026057792,0.000057463094,7.936298e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000056330166,0.00005753077,0.044167712,0.00001792252,0.0000055166574,0.0000037416178,0.000053003794,0.00031625663,0.9547421,0.000014739103,0.00009360627,0.00047156433],"study_design_scores_gemma":[0.00030616316,0.00008848176,0.11347074,0.0000026249988,0.0000017263409,0.0000021399935,0.00018990316,0.00037936645,0.88435495,0.00005691518,0.0010817326,0.0000652889],"about_ca_topic_score_codex":0.00006722848,"about_ca_topic_score_gemma":0.00022469909,"teacher_disagreement_score":0.070387155,"about_ca_system_score_codex":0.0000123467635,"about_ca_system_score_gemma":0.000044427317,"threshold_uncertainty_score":0.22513638},"labels":[],"label_agreement":null},{"id":"W4281255417","doi":"10.1016/j.gene.2022.146556","title":"Understanding of the various aspects of gene regulatory networks related to crop improvement","year":2022,"lang":"en","type":"review","venue":"Gene","topic":"CRISPR and Genetic Engineering","field":"Biochemistry, Genetics and Molecular Biology","cited_by":4,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; McGill University","funders":"Fonds de recherche du Québec – Nature et technologies","keywords":"Biology; Gene regulatory network; Computational biology; Transcriptome; Gene; Biotechnology; Systems biology; Genetics; Gene expression","score_opus":0.029716291481870088,"score_gpt":0.2966469831955794,"score_spread":0.2669306917137093,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4281255417","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0005395681,0.98632,0.011175586,0.000006539347,0.0006483106,0.0005837316,0.000042599,0.000007416905,0.0006762205],"genre_scores_gemma":[0.020965176,0.9780188,0.00029510047,0.000026753316,0.000113271155,0.000046018817,0.000119161,0.00006755527,0.00034817078],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99867576,0.000059574257,0.0005028967,0.00034370238,0.0001895169,0.0002285707],"domain_scores_gemma":[0.9988795,0.0000143648695,0.00025508172,0.00076706946,0.000023913972,0.000060068498],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00023487721,0.00024266928,0.0005446359,0.00006441248,0.00006425483,0.000005625116,0.00038956184,0.00021823437,0.00004004911],"category_scores_gemma":[0.000025214713,0.00019701936,0.00036501297,0.00026993413,0.000040089828,5.960753e-7,0.00036810912,0.00017780859,6.4934414e-7],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000041706695,0.00018471047,0.000010216512,0.0060339393,0.0021118876,0.00001634799,0.00022481084,0.06693653,0.25529614,0.0010647549,0.0023687845,0.66571015],"study_design_scores_gemma":[0.00039110798,0.0005513941,0.00002496329,0.0009868864,0.0007524561,0.00006329115,0.00005049872,0.000102820995,0.094465666,0.00010624071,0.90186095,0.0006437046],"about_ca_topic_score_codex":0.000008074455,"about_ca_topic_score_gemma":0.0000047323542,"teacher_disagreement_score":0.8994922,"about_ca_system_score_codex":0.00009929388,"about_ca_system_score_gemma":0.00015933406,"threshold_uncertainty_score":0.8034216},"labels":[],"label_agreement":null},{"id":"W4281708416","doi":"10.1016/j.gene.2022.146664","title":"Genome wide analysis of the heavy-metal-associated (HMA) gene family in tomato and expression profiles under different stresses","year":2022,"lang":"en","type":"article","venue":"Gene","topic":"Trace Elements in Health","field":"Nursing","cited_by":21,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"Shahjalal University of Science and Technology","keywords":"Biology; Subfamily; Gene; Synteny; Gene family; Genome; Genetics; Arabidopsis; Gene expression; Solanum; Botany","score_opus":0.022377258298382868,"score_gpt":0.27672887325704454,"score_spread":0.25435161495866165,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4281708416","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99649423,0.0019217279,0.000027338665,0.0005192787,0.0003054598,0.0004259025,0.00025019926,0.000033537042,0.000022335942],"genre_scores_gemma":[0.9992753,0.00004546916,0.0001455219,0.00027441946,0.00001798969,0.000072561,0.000097509066,0.00002311931,0.000048061793],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99804056,0.000448307,0.00041856905,0.0003194,0.00046196516,0.00031122792],"domain_scores_gemma":[0.99911994,0.00015228277,0.0002489279,0.00039176794,0.00003308227,0.000054024185],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00027948662,0.00015252717,0.00037102957,0.00025739297,0.0002532031,0.000016267517,0.00024024867,0.00004800375,0.00011180903],"category_scores_gemma":[0.0000537237,0.000118651406,0.0000838744,0.000944443,0.00004734609,0.000045648078,0.00029508906,0.00019271568,5.399626e-7],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001238001,0.00044532068,0.38626114,0.00004285426,0.0002744997,0.0000025035602,0.0011684971,0.008756156,0.6020205,0.000009015685,0.0001329141,0.0007627972],"study_design_scores_gemma":[0.00041950293,0.00007842145,0.824649,0.000016744581,0.00019382437,5.008272e-7,0.0007825622,0.0005479759,0.17306294,0.00009160433,0.000053431995,0.00010354234],"about_ca_topic_score_codex":0.00030007606,"about_ca_topic_score_gemma":0.00045661398,"teacher_disagreement_score":0.4383878,"about_ca_system_score_codex":0.0002982475,"about_ca_system_score_gemma":0.000035482328,"threshold_uncertainty_score":0.4838464},"labels":[],"label_agreement":null},{"id":"W4285046203","doi":"10.1016/j.gene.2022.146729","title":"Modulation of diabetic kidney disease markers by an antagonist of p75NTR in streptozotocin-treated mice","year":2022,"lang":"en","type":"article","venue":"Gene","topic":"Adenosine and Purinergic Signaling","field":"Biochemistry, Genetics and Molecular Biology","cited_by":4,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Jewish General Hospital; McGill University","funders":"Fonds de Recherche du Québec - Santé; Canadian Institutes of Health Research; Canadian Urological Association Scholarship Fund","keywords":"Streptozotocin; Biology; Creatinine; Internal medicine; Kidney; Kidney disease; Endocrinology; Diabetes mellitus; Inflammation; Context (archaeology); Immunology; Medicine","score_opus":0.005509496341834282,"score_gpt":0.22314339847752787,"score_spread":0.21763390213569359,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4285046203","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99845797,0.0008651116,0.00011958635,0.00005064902,0.000030860192,0.00013441467,0.0002579005,0.000003378145,0.00008011648],"genre_scores_gemma":[0.9980919,0.000021885231,0.000102378166,0.00008624784,0.000029056668,0.000020938729,0.0014655158,0.000011784211,0.0001702954],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9993362,0.00008017137,0.00018430501,0.000186312,0.000102621176,0.00011039614],"domain_scores_gemma":[0.99960136,0.0000046693594,0.00008830156,0.00019181802,0.000034284185,0.00007958743],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009475483,0.000075650016,0.00010149902,0.000035853434,0.000034859477,0.000002729612,0.00010467417,0.000029608427,0.00010297678],"category_scores_gemma":[0.000025477175,0.000083910876,0.00003580691,0.00012572593,0.000029608003,0.0000024483263,0.00006591346,0.00003799193,2.7618614e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00022164258,0.00013213746,0.04760004,0.000024556512,0.000019521176,0.0000030700012,0.000023593164,0.004547487,0.9437579,0.000003021092,0.0035119746,0.00015504121],"study_design_scores_gemma":[0.0009654931,0.0003358681,0.025617171,0.000010584714,0.000029764018,0.0000018542914,0.00009330337,0.0024141143,0.9686709,0.000034016004,0.0016650266,0.00016192795],"about_ca_topic_score_codex":0.00015354743,"about_ca_topic_score_gemma":0.000001979729,"teacher_disagreement_score":0.024912957,"about_ca_system_score_codex":0.000011847954,"about_ca_system_score_gemma":0.00007082245,"threshold_uncertainty_score":0.3421786},"labels":[],"label_agreement":null},{"id":"W4288045667","doi":"10.1016/j.gene.2022.146756","title":"The Bacillaceae-1 RNA motif comprises two distinct classes","year":2022,"lang":"en","type":"article","venue":"Gene","topic":"Genomics and Phylogenetic Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Novozymes; Innovationsfonden; Wilfrid Laurier University","keywords":"Biology; Ribosomal RNA; RNA; Genetics; Computational biology; Gene; Non-coding RNA; 16S ribosomal RNA","score_opus":0.011528066559963798,"score_gpt":0.23505391335392278,"score_spread":0.22352584679395898,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4288045667","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9850498,0.008636376,0.00015393893,0.00040860643,0.00047684927,0.00013232032,0.000080394675,0.000005225434,0.0050564837],"genre_scores_gemma":[0.9970655,0.0005984907,0.00024249637,0.00021736481,0.00024976803,0.000059242637,0.0000423956,0.000017114124,0.0015076492],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9991987,0.000070213384,0.00013675849,0.0002407859,0.00012326427,0.00023031299],"domain_scores_gemma":[0.99948275,0.000027525732,0.000056845074,0.00035051868,0.000039797917,0.000042539912],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00016044836,0.0001157814,0.00009327221,0.000011166583,0.0007659022,0.000026778445,0.00028489128,0.00001931396,0.00002735012],"category_scores_gemma":[0.000021450734,0.00009058039,0.00007849827,0.00005865403,0.00008155904,2.4804407e-7,0.0005426549,0.00006813351,0.00000665464],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007415929,0.00005104558,0.004912002,0.0000043584478,0.00015908091,0.0000043957457,0.00008976598,0.00253707,0.96646583,0.00040308342,0.015942011,0.009357182],"study_design_scores_gemma":[0.0005700365,0.00027468428,0.009823322,8.347119e-7,0.000026768888,0.000027626245,0.00040162713,0.00014354986,0.09872812,0.001042773,0.88870317,0.0002574881],"about_ca_topic_score_codex":0.00002721283,"about_ca_topic_score_gemma":0.00006753044,"teacher_disagreement_score":0.8727612,"about_ca_system_score_codex":0.000015202799,"about_ca_system_score_gemma":0.00004539345,"threshold_uncertainty_score":0.5890778},"labels":[],"label_agreement":null},{"id":"W4290792048","doi":"10.1016/j.gene.2022.146803","title":"Improved zebra finch brain transcriptome identifies novel proteins with sex differences","year":2022,"lang":"en","type":"article","venue":"Gene","topic":"Genomics and Phylogenetic Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Genetics","funders":"University of California, Los Angeles; National Institutes of Health","keywords":"Zebra finch; Biology; Ensembl; Transcriptome; Computational biology; RefSeq; Proteome; Proteogenomics; Genome; Songbird; Genetics; Genomics; Gene; Neuroscience; Gene expression; Ecology","score_opus":0.011205618471058113,"score_gpt":0.2081074739248629,"score_spread":0.19690185545380479,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4290792048","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9957605,0.0011984545,0.0016228235,0.00052409084,0.00015364056,0.00033316633,0.00016922051,0.000007044565,0.00023104322],"genre_scores_gemma":[0.99463755,0.000037016678,0.000994863,0.0004157456,0.00013507297,0.00024851793,0.000061071616,0.000023343364,0.0034468332],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99905515,0.000034519257,0.00014725153,0.00037228334,0.00013870694,0.0002520738],"domain_scores_gemma":[0.999567,0.0000075295065,0.000058585363,0.00028215928,0.000035646164,0.000049087103],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012354126,0.00016211557,0.0001555085,0.000031786203,0.00029188866,0.000028254986,0.00024508592,0.00004065301,0.000046948004],"category_scores_gemma":[0.000009530442,0.00014008862,0.0000662095,0.0000825232,0.000071563736,6.6393704e-7,0.00018310022,0.00008323303,0.0000013500404],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006654631,0.00007349794,0.0016374866,0.00001033003,0.00011429708,0.0000016480512,0.000277125,0.000058551035,0.99676406,0.000017302824,0.00042947684,0.00054964476],"study_design_scores_gemma":[0.0015538894,0.0014819395,0.022456942,0.0000037188843,0.000041540443,0.000046907684,0.00075815717,0.00010772186,0.936917,0.000120525256,0.036015924,0.0004957414],"about_ca_topic_score_codex":0.000076287,"about_ca_topic_score_gemma":0.00010831782,"teacher_disagreement_score":0.0598471,"about_ca_system_score_codex":0.000010664803,"about_ca_system_score_gemma":0.00006479092,"threshold_uncertainty_score":0.5712648},"labels":[],"label_agreement":null},{"id":"W4295136380","doi":"10.1016/j.gene.2022.146881","title":"Molecular alterations in anti-apoptotic BCL2 family proteins in breast cancer cell line models, drug sensitivities and dependencies to guide the development of BCL2 inhibitors","year":2022,"lang":"en","type":"article","venue":"Gene","topic":"Cell death mechanisms and regulation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":4,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Sault Area Hospital; Essar Steel Algoma (Canada); NOSM University","funders":"","keywords":"MCL1; Breast cancer; Biology; Cancer; Cancer research; Cell culture; Cancer cell; Apoptosis; Genetics; Gene; Downregulation and upregulation","score_opus":0.008715420233822735,"score_gpt":0.21886968544982013,"score_spread":0.2101542652159974,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4295136380","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9945698,0.0012025702,0.0033961944,0.0002945633,0.00006178633,0.00035917832,0.000039170798,0.0000031276245,0.00007361458],"genre_scores_gemma":[0.9969048,0.00014088598,0.0023913719,0.0001421068,0.000029475337,0.000113931295,0.000053383093,0.000012179563,0.00021188313],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99920785,0.00006329082,0.00023546832,0.0002092808,0.00014309466,0.00014098617],"domain_scores_gemma":[0.9997371,0.0000040857853,0.00004947846,0.00013993541,0.000041132836,0.000028306373],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002317935,0.000098093005,0.000104686624,0.000055099517,0.00009815173,0.000010833637,0.000069464695,0.000033158456,0.0000050776284],"category_scores_gemma":[0.0000027259036,0.00008463025,0.000023470284,0.000107024025,0.000018702032,0.0000050034846,0.00019260589,0.000055558314,1.697332e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000015983,0.000042556818,0.0001354955,0.000012580931,0.0000068532504,0.0000025447587,0.001233866,0.109420076,0.8879094,0.000028899323,0.000031457286,0.0011602814],"study_design_scores_gemma":[0.00029653715,0.00003420444,0.0035612,0.00001596492,0.00000621557,0.00000841787,0.0016825459,0.004547447,0.98930335,0.000058868834,0.00035076242,0.00013446683],"about_ca_topic_score_codex":0.00079063984,"about_ca_topic_score_gemma":0.0020214128,"teacher_disagreement_score":0.10487263,"about_ca_system_score_codex":0.000050303264,"about_ca_system_score_gemma":0.00015509574,"threshold_uncertainty_score":0.34511214},"labels":[],"label_agreement":null},{"id":"W4295253955","doi":"10.1016/j.gene.2022.146883","title":"Corrigendum to “Effect of vitamin D on malignant behavior of non-small cell lung cancer cells”. [Gene 768 (2021) 145309]","year":2022,"lang":"en","type":"erratum","venue":"Gene","topic":"Vitamin D Research Studies","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Biology; Gene; Cancer research; Vitamin D and neurology; Cell; Cancer; Lung cancer; Genetics; Internal medicine; Endocrinology","score_opus":0.0179018778681345,"score_gpt":0.30377403474174486,"score_spread":0.28587215687361034,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4295253955","genre_codex":"empirical","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.85572463,0.022580894,0.000075180964,0.00041849967,0.08461765,0.0106779095,0.0065872455,0.00009606789,0.019221932],"genre_scores_gemma":[0.10425237,0.010902063,0.000818933,0.00026245322,0.0034992597,0.004464157,0.0015944113,0.00047517827,0.8737312],"study_design_codex":"not_applicable","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99485296,0.00027965088,0.0009212698,0.0011238884,0.0017628281,0.0010593943],"domain_scores_gemma":[0.99692696,0.00015362128,0.0005277476,0.0015089527,0.00043730068,0.00044541495],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0008332968,0.00082229305,0.002247383,0.00081889576,0.00016991295,0.000013365323,0.0007080551,0.00048733535,0.0027980048],"category_scores_gemma":[0.00014990792,0.00067984214,0.00058614445,0.00079207326,0.00016790962,0.000022780427,0.0009875447,0.0014520795,0.00006187288],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00026401004,0.00042569725,0.001729254,0.0030723677,0.00033745563,0.0005286847,0.0004036939,0.0000306539,0.39613712,2.371245e-7,0.59532064,0.0017502033],"study_design_scores_gemma":[0.0021505356,0.0059580943,0.010741783,0.0012626543,0.0017419974,0.000014915605,0.00015483508,0.000058015983,0.9165018,2.2163684e-7,0.060805466,0.0006096454],"about_ca_topic_score_codex":0.0012056313,"about_ca_topic_score_gemma":0.00015606712,"teacher_disagreement_score":0.85450923,"about_ca_system_score_codex":0.0007957932,"about_ca_system_score_gemma":0.0011047063,"threshold_uncertainty_score":0.9995653},"labels":[],"label_agreement":null},{"id":"W4296143565","doi":"10.1016/j.gene.2022.146899","title":"Role of 19 SNPs in 10 genes with type 2 diabetes in the Pakistani population","year":2022,"lang":"en","type":"article","venue":"Gene","topic":"Genetic Associations and Epidemiology","field":"Biochemistry, Genetics and Molecular Biology","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Public Health Ontario; University of Toronto; Hospital for Sick Children","funders":"Pakistan Academy of Sciences; Higher Education Commision, Pakistan; Higher Education Commission, Pakistan","keywords":"Odds ratio; Type 2 diabetes; Single-nucleotide polymorphism; Biology; Minor allele frequency; Genome-wide association study; Genetics; Confidence interval; Allele; Population; Diabetic retinopathy; Diabetes mellitus; Internal medicine; Genotype; Medicine; Endocrinology; Gene","score_opus":0.007635501294023802,"score_gpt":0.239319929354894,"score_spread":0.2316844280608702,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4296143565","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99782765,0.0017086678,0.000007775026,0.00012243494,0.000024348677,0.00009372599,0.000012591398,0.0000014381393,0.00020138804],"genre_scores_gemma":[0.99900043,0.000056055196,0.0003941949,0.00016531168,0.00003032347,0.000033569173,0.0002322324,0.000005677179,0.00008219838],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99937737,0.00016356875,0.00014419759,0.00012589486,0.00006631173,0.00012264647],"domain_scores_gemma":[0.99972916,0.000016888074,0.00006747657,0.00015652095,0.000019321811,0.000010617805],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003606563,0.000051314837,0.00008978898,0.00003187768,0.000040411152,0.0000021938308,0.00010948723,0.0000371979,0.00004171449],"category_scores_gemma":[0.000039319468,0.00003964954,0.000018551294,0.0001509229,0.0000146314405,7.5649587e-7,0.000050530343,0.00004572153,9.648005e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000030884315,0.00004504818,0.8085973,0.000002840414,0.000010764184,5.113286e-7,0.00013507533,0.006499587,0.18341634,0.000035314253,0.00026879617,0.000957511],"study_design_scores_gemma":[0.0003363207,0.00037233197,0.9799531,0.0000014830655,0.000007822504,0.0000028458835,0.0011308015,0.00036361217,0.008298652,0.00045657012,0.008982512,0.000093939496],"about_ca_topic_score_codex":0.0003246637,"about_ca_topic_score_gemma":0.0005995605,"teacher_disagreement_score":0.17511769,"about_ca_system_score_codex":0.000015859383,"about_ca_system_score_gemma":0.00002918469,"threshold_uncertainty_score":0.16168615},"labels":[],"label_agreement":null},{"id":"W4307658416","doi":"10.1016/j.gene.2022.146974","title":"Divergent subgenome evolution in the allotetraploid frog Xenopus calcaratus","year":2022,"lang":"en","type":"article","venue":"Gene","topic":"Chromosomal and Genetic Variations","field":"Agricultural and Biological Sciences","cited_by":13,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"","keywords":"Biology; Subgenus; Ploidy; Genome; Xenopus; Evolutionary biology; Chromosome; Polyploid; Genetics; Genus; Gene; Zoology","score_opus":0.016274312301255582,"score_gpt":0.19660939847317377,"score_spread":0.18033508617191818,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4307658416","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99616045,0.0007516847,0.0000028285056,0.0021696456,0.00021076703,0.00015335726,0.00009794554,0.000017639817,0.0004356882],"genre_scores_gemma":[0.99907523,0.00002345059,0.000022420076,0.0003139927,0.00016602008,0.000063226245,0.00009756291,3.806006e-7,0.00023772256],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99922925,0.00011657831,0.00011013074,0.00015713659,0.00021152616,0.00017537452],"domain_scores_gemma":[0.9998419,0.00003996213,0.000026634432,0.00004970595,0.00001220282,0.000029587849],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00017753882,0.000060798557,0.000059654158,0.000008056493,0.00038789827,0.000018496388,0.0002488527,0.000020308858,0.0011256927],"category_scores_gemma":[0.000007653146,0.000021633461,0.000049908052,0.0003910773,0.000013416895,0.000019211593,0.000101735146,0.00009393539,0.000035443816],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00001403798,0.0002103551,0.021304218,8.5430327e-7,0.000008769261,0.000013011815,0.0006004596,0.00058997853,0.9698914,0.0011645781,0.0005084511,0.005693842],"study_design_scores_gemma":[0.0001316493,0.0002317063,0.9299666,6.9170756e-7,0.000008233858,0.00002060325,0.0005893786,0.000093808914,0.0013809229,0.0024099876,0.06504745,0.000118935335],"about_ca_topic_score_codex":0.0008437041,"about_ca_topic_score_gemma":0.0010440592,"teacher_disagreement_score":0.9685105,"about_ca_system_score_codex":0.00005882984,"about_ca_system_score_gemma":0.000008498341,"threshold_uncertainty_score":0.9997874},"labels":[],"label_agreement":null},{"id":"W4307727139","doi":"10.1016/j.gene.2022.146956","title":"Identification of RP1 as the genetic cause of retinitis pigmentosa in a multi-generational pedigree using Extremely Low-Coverage Whole Genome Sequencing (XLC-WGS)","year":2022,"lang":"en","type":"article","venue":"Gene","topic":"Retinal Development and Disorders","field":"Biochemistry, Genetics and Molecular Biology","cited_by":4,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"Biology; Retinitis pigmentosa; Genetics; DNA sequencing; Locus (genetics); 1000 Genomes Project; Whole genome sequencing; Indel; Genome; Computational biology; Genotype; Gene; Single-nucleotide polymorphism","score_opus":0.03121002985324422,"score_gpt":0.26226572555572875,"score_spread":0.23105569570248452,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4307727139","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99521935,0.0011645855,0.00306724,0.00006092636,0.000090707435,0.00024144993,0.0000746831,0.0000029671326,0.00007811353],"genre_scores_gemma":[0.9979554,0.00016197666,0.0010666819,0.00009232254,0.000043978413,0.000039572245,0.00029909497,0.000015289954,0.00032569084],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99880636,0.00011278648,0.00041783266,0.00025291354,0.00024994434,0.00016019249],"domain_scores_gemma":[0.9994215,0.0000092212085,0.00021950799,0.00024933476,0.00007458759,0.00002584328],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00031106407,0.0001083538,0.000116083575,0.00007421047,0.00012095246,0.000013531899,0.0002005466,0.00004508609,0.00006429619],"category_scores_gemma":[0.00005002825,0.000107017615,0.00006116246,0.00017203735,0.000055291093,0.0000054464003,0.00015972971,0.0000680431,0.0000022656134],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000046019522,0.000051510084,0.0071911,0.000019245732,0.000025988706,0.0000057562884,0.00045450163,0.013492463,0.9784354,0.000011659385,0.000022418748,0.00024396402],"study_design_scores_gemma":[0.0011025923,0.00014771774,0.061178464,0.000013686259,0.000037182774,0.000046319772,0.00066537654,0.0035076449,0.93190134,0.00014559532,0.0009725596,0.00028152796],"about_ca_topic_score_codex":0.00010528677,"about_ca_topic_score_gemma":0.00006869378,"teacher_disagreement_score":0.05398736,"about_ca_system_score_codex":0.00005261053,"about_ca_system_score_gemma":0.0002528203,"threshold_uncertainty_score":0.43640515},"labels":[],"label_agreement":null},{"id":"W4313655724","doi":"10.1016/j.gene.2023.147184","title":"TXNIP shuttling - a key molecular link in regulating inflammation and mitochondrial dysfunction in freeze tolerant wood frogs","year":2023,"lang":"en","type":"article","venue":"Gene","topic":"Heat shock proteins research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":4,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Carleton University","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"TXNIP; Thioredoxin-Interacting Protein; Biology; Cell biology; Thioredoxin; Inflammasome; Mitochondrion; Peroxiredoxin; Oxidative stress; Reactive oxygen species; Inflammation; Biochemistry; Immunology; Peroxidase","score_opus":0.013159291200901133,"score_gpt":0.26251457214061064,"score_spread":0.2493552809397095,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4313655724","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99691343,0.00030504164,0.0015789339,0.00053106743,0.00010685872,0.00040719152,0.0000043169243,0.00002204198,0.00013112016],"genre_scores_gemma":[0.9969663,0.00007486277,0.0021188362,0.000028785784,0.00041089425,0.00009882453,0.00015419787,0.000025690659,0.000121623656],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9987055,0.00012657668,0.00028124283,0.0003708595,0.00019078261,0.0003250366],"domain_scores_gemma":[0.99959093,0.000015330623,0.00003685481,0.000250027,0.000044695662,0.000062150684],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004113166,0.00011879878,0.0001350895,0.00020595331,0.000048270536,0.00003528991,0.000093423856,0.00020679993,0.000007912252],"category_scores_gemma":[0.00029475632,0.00013026451,0.00003357166,0.00035500524,0.000026925389,0.000007920723,0.00015743142,0.00016334768,0.0000149865045],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008814067,0.000008589611,0.0014838984,0.000026005755,0.000008842641,0.000025419851,0.00014790877,0.0030727875,0.9792457,0.000014487512,0.000028722416,0.015849492],"study_design_scores_gemma":[0.0014576855,0.00011974536,0.005853523,0.00005018543,0.0000030249762,0.0000071853565,0.000054122764,0.010930887,0.98009753,0.00025669328,0.0010076801,0.00016172485],"about_ca_topic_score_codex":0.000201959,"about_ca_topic_score_gemma":0.0003601538,"teacher_disagreement_score":0.015687767,"about_ca_system_score_codex":0.00003739946,"about_ca_system_score_gemma":0.000070959686,"threshold_uncertainty_score":0.5312032},"labels":[],"label_agreement":null},{"id":"W4313681097","doi":"10.1016/j.gene.2023.147179","title":"Breast cancer sub-types display heterogeneity in gene amplification and mRNA expression of the anti-apoptotic members of BCL2 family","year":2023,"lang":"en","type":"article","venue":"Gene","topic":"Cell death mechanisms and regulation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"NOSM University; Essar Steel Algoma (Canada); Sault Area Hospital","funders":"","keywords":"MCL1; Breast cancer; Biology; Gene duplication; Cancer; Apoptosis; Cancer research; Gene; Messenger RNA; Basal (medicine); Genetics; Downregulation and upregulation; Endocrinology","score_opus":0.011088138389983196,"score_gpt":0.2468156247515792,"score_spread":0.23572748636159602,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4313681097","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9987504,0.00074966555,0.00015483209,0.00004272331,0.00011127544,0.00012517897,0.000053579563,0.0000035383293,0.000008817942],"genre_scores_gemma":[0.99813515,0.0016048987,0.00009444613,0.0000126766145,0.00003756156,0.000008936493,0.00005970301,0.000008829633,0.00003782785],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9994516,0.000040408133,0.00015199011,0.00017097434,0.00008902079,0.00009600064],"domain_scores_gemma":[0.9996407,0.000005030161,0.0000905869,0.00020423596,0.000037644026,0.000021797836],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012314359,0.00007013146,0.00009640223,0.00003202681,0.000036177466,0.00000350519,0.00007477559,0.00007985082,0.0000027420308],"category_scores_gemma":[0.0000057019956,0.000050538176,0.000039714658,0.00012251576,0.00004250753,0.000002579624,0.00007627749,0.00002911864,4.2710369e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000021023161,0.000017277504,0.0107675865,0.000026467822,0.00000891264,1.732695e-7,0.000037503487,0.0018533091,0.98554134,0.000008055324,0.000028115956,0.0016902346],"study_design_scores_gemma":[0.00014448774,0.000010721177,0.31654567,0.000016190155,0.000007648653,0.0000024787082,0.000013981881,0.0003067344,0.68285954,0.000017230808,0.000035840683,0.00003948643],"about_ca_topic_score_codex":0.00009044774,"about_ca_topic_score_gemma":0.00005468725,"teacher_disagreement_score":0.30577806,"about_ca_system_score_codex":0.000006370091,"about_ca_system_score_gemma":0.00002192919,"threshold_uncertainty_score":0.20608869},"labels":[],"label_agreement":null},{"id":"W4319020194","doi":"10.1016/j.gene.2023.147232","title":"Emerging role of microRNAs and long non-coding RNAs in COVID-19 with implications to therapeutics","year":2023,"lang":"en","type":"review","venue":"Gene","topic":"Cancer-related molecular mechanisms research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":17,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Montreal Clinical Research Institute","funders":"","keywords":"Biology; microRNA; Gene silencing; Competing endogenous RNA; RNA; Computational biology; RNA interference; Coronavirus; Long non-coding RNA; Gene; Gene expression; Regulation of gene expression; Non-coding RNA; Genetics; Coronavirus disease 2019 (COVID-19); Disease; Infectious disease (medical specialty)","score_opus":0.0466678055550164,"score_gpt":0.38270087212848775,"score_spread":0.3360330665734713,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4319020194","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0003268359,0.967804,0.030690752,0.00010233888,0.000031632084,0.0009020808,0.0000754922,0.000010387456,0.000056491208],"genre_scores_gemma":[0.00062329293,0.99789655,0.0006679989,0.00012778543,0.00006629296,0.00019973842,0.00020748643,0.000082647945,0.00012822497],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99868894,0.000067178495,0.0003191981,0.00048668435,0.00013232185,0.00030568516],"domain_scores_gemma":[0.99913746,0.0000225773,0.00013162155,0.0004894695,0.000062588704,0.00015629071],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00024134379,0.00022830389,0.00048009667,0.00025672605,0.0000564453,0.000024238043,0.00027536336,0.00025243184,0.0000049698224],"category_scores_gemma":[0.00004117998,0.00021032956,0.000102857295,0.0005112758,0.000041681047,0.000001732375,0.00026892938,0.00019157166,0.0000070825363],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000029722058,0.00002766892,0.0000063792095,0.002710149,0.00032850224,0.000014322695,0.0001165943,0.0001443242,0.4296064,0.000025994093,0.000057229736,0.56693274],"study_design_scores_gemma":[0.0004159069,0.0002060221,0.000016493035,0.0018319201,0.0002176217,0.000092515365,0.00007544202,0.000015710439,0.08211621,0.000040492858,0.91455,0.000421638],"about_ca_topic_score_codex":0.00007401848,"about_ca_topic_score_gemma":0.00031459198,"teacher_disagreement_score":0.9144928,"about_ca_system_score_codex":0.00008576304,"about_ca_system_score_gemma":0.00060397177,"threshold_uncertainty_score":0.85769904},"labels":[],"label_agreement":null},{"id":"W4319166470","doi":"10.1016/j.gene.2023.147255","title":"Heterologous functional analysis and expression patterns of gibberellin 2-oxidase genes of barley (Hordeum vulgare L.)","year":2023,"lang":"en","type":"article","venue":"Gene","topic":"Plant Molecular Biology Research","field":"Agricultural and Biological Sciences","cited_by":10,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba","funders":"Natural Sciences and Engineering Research Council of Canada; Manitoba Crop Alliance","keywords":"Biology; Gibberellin; Hordeum vulgare; Endosperm; Aleurone; Gene; Heterologous expression; Recombinant DNA; Biochemistry; Oryza sativa; Botany; Genetics; Poaceae","score_opus":0.022222681188742783,"score_gpt":0.23049548245901122,"score_spread":0.20827280127026843,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4319166470","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99910015,0.00025021238,0.000048403508,0.00017500008,0.000025027532,0.00004922649,0.00031639784,0.000018553976,0.000017025715],"genre_scores_gemma":[0.9988454,0.00022537207,0.00004158798,0.000022074219,0.000034231583,0.000006792341,0.0006257703,5.412695e-7,0.00019824904],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9992072,0.0000991976,0.00015448143,0.0002126483,0.00015968762,0.00016681377],"domain_scores_gemma":[0.99966633,0.00010493122,0.000061715495,0.00005715742,0.000055602995,0.000054242526],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00018403558,0.00007286267,0.00017822947,0.00006476131,0.000053848264,0.0000056393683,0.00011539243,0.000089664034,0.00027089473],"category_scores_gemma":[0.000020783982,0.000028965744,0.000087381944,0.00051226094,0.000051995296,0.000017755536,0.00012676531,0.000051962375,0.000008300216],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000027800386,0.000016221751,0.24804756,0.0000043265263,0.000051223145,0.0000057601183,0.00000787606,0.000034920187,0.7434607,0.0000012861095,0.00006874887,0.008273569],"study_design_scores_gemma":[0.000053564687,0.000097593555,0.64369804,0.0000035645774,0.000022852228,0.0000031691452,0.000020755859,0.00011108589,0.355802,0.00001901372,0.00012539646,0.0000429761],"about_ca_topic_score_codex":0.00014580367,"about_ca_topic_score_gemma":0.00029456668,"teacher_disagreement_score":0.39565048,"about_ca_system_score_codex":0.0000028764769,"about_ca_system_score_gemma":0.0000030875344,"threshold_uncertainty_score":0.29661074},"labels":[],"label_agreement":null},{"id":"W4319311847","doi":"10.1016/j.gene.2023.147257","title":"Genetic and transcriptome analysis of a cotton leaf variegation mutant","year":2023,"lang":"en","type":"article","venue":"Gene","topic":"Photosynthetic Processes and Mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Biotechnology Research Institute","funders":"National Natural Science Foundation of China","keywords":"Biology; Chloroplast; Thylakoid; Mutant; Transcriptome; Photosynthesis; Wild type; Phenotype; Cell biology; Genetics; Botany; Gene; Gene expression","score_opus":0.008498044144023957,"score_gpt":0.23263859711320795,"score_spread":0.22414055296918398,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4319311847","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9907227,0.00022901519,0.008731554,0.00004256618,0.000045297875,0.00006997964,0.000049151273,0.000011746171,0.000097978664],"genre_scores_gemma":[0.99874836,0.0005982633,0.00031757975,0.00006147964,0.000023667639,0.000011733768,0.000099551,0.000008728467,0.00013064305],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99946016,0.000013923932,0.00012745036,0.00019510892,0.00008069474,0.00012265568],"domain_scores_gemma":[0.99970645,0.0000044289177,0.000041793617,0.00016645246,0.000038172442,0.00004271504],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000092047965,0.000070369475,0.00012777478,0.00010413366,0.000029104312,0.000006611832,0.00006694551,0.000063930886,0.000016942233],"category_scores_gemma":[0.00001705018,0.00006721088,0.0000626802,0.0003983651,0.000028540306,0.0000012107389,0.000028942899,0.00001934149,0.0000023828568],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000019869743,0.000012968357,0.0001474914,0.000016011067,0.00018548814,0.0000017174928,0.00009573517,0.00016050087,0.9978356,0.000047129473,0.000010986454,0.0014665133],"study_design_scores_gemma":[0.00017627352,0.00010647595,0.0032118235,0.0000027976178,0.00026907944,0.0000045777265,0.00005183062,0.0025594465,0.99223226,0.00022053406,0.0010853219,0.00007956404],"about_ca_topic_score_codex":0.000022403054,"about_ca_topic_score_gemma":0.000024880448,"teacher_disagreement_score":0.008413974,"about_ca_system_score_codex":0.0000025537217,"about_ca_system_score_gemma":0.000024404133,"threshold_uncertainty_score":0.274078},"labels":[],"label_agreement":null},{"id":"W4319601870","doi":"10.1016/j.gene.2023.147262","title":"Potential role for the germ cell-specific Rad21 in early meiosis of oocyte and spermatocyte in the Chinese mitten crab Eriocheir sinensis","year":2023,"lang":"en","type":"article","venue":"Gene","topic":"Chromosomal and Genetic Variations","field":"Agricultural and Biological Sciences","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ministry of Agriculture","funders":"National Natural Science Foundation of China","keywords":"Biology; Meiosis; Spermatogenesis; Germ cell; Oocyte; Eriocheir; Chinese mitten crab; Genetics; Molecular biology; Spermatocyte; Spermatid; Somatic cell; Meiosis II; Gene; Endocrinology; Embryo","score_opus":0.009902841691372085,"score_gpt":0.20066954801153353,"score_spread":0.19076670632016143,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4319601870","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99404174,0.0010082672,0.0000023264972,0.004469283,0.00005978739,0.00029888473,0.00006177379,0.000009628513,0.000048320795],"genre_scores_gemma":[0.9991338,0.00041693696,0.000049097045,0.00011748608,0.00015102561,0.00004395459,0.000025943149,8.774671e-7,0.000060845094],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99932516,0.00005275071,0.00018171984,0.00015530406,0.00011952845,0.00016551148],"domain_scores_gemma":[0.9995838,0.00025711118,0.000049209117,0.00006524255,0.000023608658,0.0000210665],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00024443128,0.00008264777,0.00011643811,0.000015236002,0.00011424316,0.00003724224,0.00019263975,0.000043920205,0.000030405268],"category_scores_gemma":[0.000018827543,0.000024253302,0.00006519099,0.0005499464,0.000039279814,0.000033886186,0.000059464397,0.000051741088,0.000007715512],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000060980667,0.000070018774,0.0224708,0.0000065720583,0.000010126036,0.000004904166,0.0016529196,0.00014877794,0.96018887,0.000034245906,0.00036640564,0.014985374],"study_design_scores_gemma":[0.00022490995,0.000054336273,0.98964477,0.000003928929,0.000006297422,0.000004303472,0.0004551222,0.0006042059,0.006152896,0.0006888957,0.0020947421,0.0000655678],"about_ca_topic_score_codex":0.00031752113,"about_ca_topic_score_gemma":0.0006678987,"teacher_disagreement_score":0.967174,"about_ca_system_score_codex":0.000005989923,"about_ca_system_score_gemma":0.000004892788,"threshold_uncertainty_score":0.09890209},"labels":[],"label_agreement":null},{"id":"W4367185434","doi":"10.1016/j.gene.2023.147450","title":"Bioinformatics characteristics and expression analysis of TLR3 and its adaptor protein TRIF in largemouth bass (Micropterus salmoides) upon Flavobacterium columnare infection","year":2023,"lang":"en","type":"article","venue":"Gene","topic":"Aquaculture disease management and microbiota","field":"Immunology and Microbiology","cited_by":13,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ministry of Agriculture","funders":"","keywords":"TRIF; Biology; Micropterus; Death domain; TLR3; Molecular biology; Bass (fish); Receptor; Innate immune system; Genetics; Fishery; Toll-like receptor; Programmed cell death; Apoptosis","score_opus":0.010688720695914158,"score_gpt":0.22228201378572815,"score_spread":0.211593293089814,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4367185434","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9984317,0.00038756098,0.000055260527,0.00004152199,0.00011111236,0.00042506322,0.0004509981,0.000052546944,0.000044240936],"genre_scores_gemma":[0.99723655,0.00029986026,0.00007351561,0.000028770377,0.000014140203,0.000023173068,0.0015142916,0.00001058962,0.0007990983],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99908465,0.000084029954,0.0003543903,0.00021196256,0.000030074403,0.00023489568],"domain_scores_gemma":[0.9995619,0.000020323587,0.00018668133,0.00015172765,0.000053494303,0.000025891924],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00021290797,0.00015809794,0.000353208,0.00045135926,0.000085165244,0.000022050779,0.00006957559,0.00017648772,0.00006770812],"category_scores_gemma":[0.000043696,0.00014358581,0.0000633833,0.0005864327,0.00004105679,0.000109836205,0.00015924568,0.00011196515,0.00003674982],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013291856,0.000048714865,0.009665223,0.00014300439,0.0002641989,0.00000419823,0.00063850195,0.0000034584357,0.9869001,0.000016729233,0.00032879156,0.0018541788],"study_design_scores_gemma":[0.001942212,0.00013865886,0.3829946,0.00015554544,0.00071305875,0.000004657445,0.00048241534,0.0006640776,0.6067794,0.0000058151913,0.005744139,0.00037541086],"about_ca_topic_score_codex":0.000044062333,"about_ca_topic_score_gemma":0.00006208503,"teacher_disagreement_score":0.38012066,"about_ca_system_score_codex":0.00002077352,"about_ca_system_score_gemma":0.000014887453,"threshold_uncertainty_score":0.58552593},"labels":[],"label_agreement":null},{"id":"W4376598275","doi":"10.1016/j.gene.2023.147477","title":"The transcription factors Creb1 and CEBPB regulate Sox9 promoter activity in TM4 Sertoli cells","year":2023,"lang":"en","type":"article","venue":"Gene","topic":"Genetic and Clinical Aspects of Sex Determination and Chromosomal Abnormalities","field":"Biochemistry, Genetics and Molecular Biology","cited_by":8,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; St. Michael's Hospital; Université de Moncton","funders":"Natural Sciences and Engineering Research Council of Canada; New Brunswick Innovation Foundation","keywords":"Biology; SOX9; Sertoli cell; Transcription factor; Genetics; Transcription (linguistics); Promoter activity; Promoter; Cell biology; Computational biology; Gene; Endocrinology; Gene expression; Spermatogenesis","score_opus":0.015282676223016645,"score_gpt":0.24985556366116532,"score_spread":0.23457288743814866,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4376598275","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99864554,0.0001533361,0.000029035295,0.0005874983,0.00014166321,0.00012039009,0.0000114233235,0.000015964753,0.00029512972],"genre_scores_gemma":[0.9939458,0.0007154499,0.000030137882,0.00007236429,0.000073844225,0.000012050743,0.000026851478,0.000009728058,0.0051137703],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9993017,0.00005116931,0.00014125861,0.00021355845,0.000088857916,0.00020351114],"domain_scores_gemma":[0.9997131,0.000018752893,0.000034995188,0.00015645218,0.000022948516,0.00005374931],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014783147,0.000102411905,0.00009005108,0.000021918599,0.000112382055,0.000035117915,0.000094068615,0.00009988975,0.0000124934395],"category_scores_gemma":[0.00001439326,0.00007260029,0.00004905341,0.000073586765,0.000087410706,0.0000044420717,0.00004835327,0.00006426102,0.000011553775],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000043165877,0.000027908753,0.0013213349,0.000014232784,0.000012517724,0.0000033514823,0.00016756679,0.000015631931,0.98783123,0.00002017612,0.0002446494,0.010298258],"study_design_scores_gemma":[0.00035593694,0.00016690319,0.09475147,0.0000062412796,0.000006568617,0.000003453199,0.00028949525,0.00017273857,0.89378476,0.00035117468,0.009979064,0.00013216982],"about_ca_topic_score_codex":0.000017723261,"about_ca_topic_score_gemma":0.00009349636,"teacher_disagreement_score":0.09404642,"about_ca_system_score_codex":0.000004746263,"about_ca_system_score_gemma":0.000017539836,"threshold_uncertainty_score":0.2960554},"labels":[],"label_agreement":null},{"id":"W4381853246","doi":"10.1016/j.gene.2023.147586","title":"Validation of the male-specific ORF of the paternally-transmitted mtDNA in Mytilus edulis as a protein-coding gene","year":2023,"lang":"en","type":"article","venue":"Gene","topic":"Marine Biology and Environmental Chemistry","field":"Engineering","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Biology; Mytilus; Mitochondrial DNA; Open reading frame; Genetics; Gene; Sperm; Ecology","score_opus":0.008011086619261294,"score_gpt":0.1761468478262179,"score_spread":0.1681357612069566,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4381853246","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.998502,0.000073559095,0.000053124655,0.00006142501,0.00010340604,0.00014522206,0.000011129184,0.00002109311,0.001029024],"genre_scores_gemma":[0.9991954,0.000077178665,0.00009713535,0.0000072296684,0.000032348235,0.000019538515,0.000011438941,0.000010372831,0.0005493636],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9995393,0.00001879532,0.00016095878,0.00008595635,0.000084936946,0.00011004928],"domain_scores_gemma":[0.9997379,0.000009439841,0.00003339601,0.0002028803,0.0000041299813,0.000012231337],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00008998495,0.00007172839,0.00008378114,0.000018592762,0.000021179047,0.0000022711733,0.00017409355,0.00006461515,0.00014128657],"category_scores_gemma":[0.0000061418646,0.000049124657,0.000047907866,0.00016371546,0.000038107086,0.000016188917,0.00006138624,0.00009141769,0.000012331042],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000008305479,0.000008380631,0.020916779,0.000054560627,0.000012097687,0.0000016216511,0.000091687885,0.0020216177,0.9762703,0.000006527381,0.00002127428,0.0005868168],"study_design_scores_gemma":[0.00014341432,0.000005099628,0.097619705,0.000026429105,0.00000383898,0.000005026478,0.000015309593,0.0002578233,0.90154904,0.0000809947,0.00024586255,0.000047440437],"about_ca_topic_score_codex":0.000027752249,"about_ca_topic_score_gemma":0.0000065197855,"teacher_disagreement_score":0.07670292,"about_ca_system_score_codex":0.00002866336,"about_ca_system_score_gemma":0.0000055848523,"threshold_uncertainty_score":0.20032454},"labels":[],"label_agreement":null},{"id":"W4383369379","doi":"10.1016/j.gene.2023.147603","title":"Novel gene rearrangements in mitochondrial genomes of four families of praying mantises (Insecta, Mantodea) and phylogenetic relationships of Mantodea","year":2023,"lang":"en","type":"article","venue":"Gene","topic":"Fossil Insects in Amber","field":"Agricultural and Biological Sciences","cited_by":5,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Carleton University","funders":"","keywords":"Biology; Mantis; Phylogenetic tree; Monophyly; Mitochondrial DNA; Genome; Synapomorphy; Evolutionary biology; Phylogenetics; Genetics; Gene; Zoology; Clade","score_opus":0.06835265427929038,"score_gpt":0.2409149236864371,"score_spread":0.17256226940714672,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4383369379","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99828994,0.0007518493,0.000008915657,0.00006182221,0.00013085689,0.00025434862,0.0001153608,0.000018675932,0.0003682],"genre_scores_gemma":[0.99651694,0.0006734217,0.0025057404,0.000007624593,0.00007380387,0.000013432151,0.000028976401,0.000002276432,0.00017779162],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99879885,0.00007427281,0.0004166119,0.00024930455,0.00024830367,0.00021264095],"domain_scores_gemma":[0.9994084,0.00019493357,0.00019935408,0.00009601983,0.000065583095,0.000035700985],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00024446694,0.0001228303,0.0002691413,0.00007761728,0.000064303385,0.000008440909,0.00017869487,0.000096933516,0.00004249552],"category_scores_gemma":[0.00008591106,0.000063681495,0.000055925957,0.00056210125,0.00013896491,0.000052509375,0.00011982015,0.00006351335,0.0000044448116],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00003838248,0.000045804125,0.11946387,0.0000477194,0.000020414838,0.0000030266488,0.00026486488,0.000096786884,0.87485623,0.000030922754,0.00003735149,0.005094639],"study_design_scores_gemma":[0.00032117093,0.00011764617,0.82951975,0.000044524324,0.000016074675,0.0000057690554,0.00024338995,0.00011849765,0.16914839,0.0002645751,0.000097070406,0.00010316977],"about_ca_topic_score_codex":0.0006808634,"about_ca_topic_score_gemma":0.0015251449,"teacher_disagreement_score":0.7100558,"about_ca_system_score_codex":0.000011132299,"about_ca_system_score_gemma":0.0000095303485,"threshold_uncertainty_score":0.2596856},"labels":[],"label_agreement":null},{"id":"W4384700438","doi":"10.1016/j.gene.2023.147639","title":"LRRK2 exonic variants are associated with lysosomal hydrolase activities and lysosphingolipid alterations in Parkinson's disease","year":2023,"lang":"en","type":"article","venue":"Gene","topic":"Lysosomal Storage Disorders Research","field":"Medicine","cited_by":10,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Montreal Neurological Institute and Hospital","funders":"","keywords":"LRRK2; Glucocerebrosidase; Biology; Phosphorylation; Enzyme; Population; Sphingolipid; Ceramide; Molecular biology; Mutation; Acid sphingomyelinase; Sphingomyelin; Internal medicine; Biochemistry; Gene; Medicine; Cholesterol","score_opus":0.023092011785853368,"score_gpt":0.2712141383415215,"score_spread":0.24812212655566815,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4384700438","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9966747,0.00037786236,0.000024983632,0.0018975354,0.00005026588,0.000451114,0.000071621165,0.00014290279,0.00030901478],"genre_scores_gemma":[0.99784213,0.00014813624,0.00004491755,0.0001938041,0.00009278052,0.00012759284,0.0001541251,0.00004025091,0.001356289],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99842244,0.00010039297,0.00017275894,0.00038548507,0.00043828023,0.00048064982],"domain_scores_gemma":[0.9991622,0.00013276526,0.00006337366,0.00028366892,0.00005880004,0.0002992046],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00022702909,0.00017366189,0.0002834512,0.00028377454,0.00016030725,0.0000622918,0.00008450877,0.000073129435,0.000079086414],"category_scores_gemma":[0.00043521245,0.00015313718,0.000043823187,0.00080905174,0.000096537,0.0001764647,0.00009222376,0.00022766857,0.000037994636],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0014025053,0.0006528152,0.97663826,0.0001677846,0.00026243003,0.003577783,0.0012525726,0.00050830765,0.011539282,0.000055887194,0.0014322833,0.0025100617],"study_design_scores_gemma":[0.003011945,0.00017715419,0.986962,0.00018197788,0.000062191495,0.000022784074,0.00031883823,0.00747294,0.00087296375,0.000097050564,0.00061312923,0.00020700689],"about_ca_topic_score_codex":0.000106947286,"about_ca_topic_score_gemma":0.00056459615,"teacher_disagreement_score":0.010666319,"about_ca_system_score_codex":0.0001413293,"about_ca_system_score_gemma":0.00023064118,"threshold_uncertainty_score":0.6244753},"labels":[],"label_agreement":null},{"id":"W4387521216","doi":"10.1016/j.gene.2023.147894","title":"Bark transcriptome analyses reveals molecular mechanisms involved in tapping panel dryness occurrence and development in rubber tree (Hevea brasiliensis)","year":2023,"lang":"en","type":"article","venue":"Gene","topic":"Plant biochemistry and biosynthesis","field":"Biochemistry, Genetics and Molecular Biology","cited_by":7,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ministry of Agriculture","funders":"National Key Research and Development Program of China; National Natural Science Foundation of China","keywords":"Hevea brasiliensis; Biology; Dryness; Tapping; Transcriptome; Natural rubber; Bark (sound); Botany; Hevea; Genetics; Gene; Ecology; Gene expression; Composite material","score_opus":0.05443015589542381,"score_gpt":0.2810903261203417,"score_spread":0.22666017022491786,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4387521216","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99834555,0.00065299566,0.00053616887,0.00009808934,0.00005350887,0.00014931953,0.00006731343,0.000021650774,0.000075386546],"genre_scores_gemma":[0.99762136,0.0002610419,0.0013308113,0.0001981735,0.000023425184,0.00003961636,0.0004406063,0.000012236917,0.00007271742],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99847436,0.00007703164,0.00034215374,0.0005500431,0.00015870457,0.00039769066],"domain_scores_gemma":[0.999551,0.000022047085,0.000060328355,0.00024138477,0.00003087696,0.00009434832],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00038782845,0.00023351896,0.000264641,0.00014413809,0.000050567112,0.000023126584,0.00019923157,0.00020802804,0.000008389739],"category_scores_gemma":[0.000082598235,0.00022560694,0.000052521944,0.0004054216,0.000046988738,0.000006087105,0.00009827304,0.00009604677,0.000009566843],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000037310132,0.000045479985,0.0039271596,0.000053442986,0.000037671427,0.000074847456,0.000095014904,0.00004536646,0.99399245,0.0000044669077,0.00012778741,0.0015590009],"study_design_scores_gemma":[0.00041407024,0.000023078377,0.021926327,0.000062271974,0.000012015951,0.000011799937,0.00017005867,0.00005719639,0.9764276,0.00005790719,0.00053662225,0.0003010471],"about_ca_topic_score_codex":0.000018297365,"about_ca_topic_score_gemma":0.00013839484,"teacher_disagreement_score":0.017999168,"about_ca_system_score_codex":0.000020503508,"about_ca_system_score_gemma":0.00007904175,"threshold_uncertainty_score":0.9199984},"labels":[],"label_agreement":null},{"id":"W4387941061","doi":"10.1016/j.gene.2023.147920","title":"Loss of PKCδ/Prkcd prevents cartilage degeneration in joints but exacerbates hyperalgesia in an experimental osteoarthritis mouse model","year":2023,"lang":"en","type":"article","venue":"Gene","topic":"Osteoarthritis Treatment and Mechanisms","field":"Medicine","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Jewish General Hospital","funders":"National Institute of Arthritis and Musculoskeletal and Skin Diseases","keywords":"Hyperalgesia; Osteoarthritis; Sensory neuron; Nerve growth factor; Internal medicine; Endocrinology; Cartilage; Tropomyosin receptor kinase A; Allodynia; Dorsal root ganglion; Biology; Sensory system; Nociception; Medicine; Pathology; Receptor; Neuroscience; Anatomy","score_opus":0.026715301353275933,"score_gpt":0.27618319817193004,"score_spread":0.2494678968186541,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4387941061","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99823445,0.00088148494,0.000008439917,0.00004637391,0.00009224971,0.00053767196,0.000048715723,0.000056202374,0.00009441255],"genre_scores_gemma":[0.99620175,0.000115899995,0.0014192997,0.000054411394,0.000052594747,0.00013405728,0.00044369278,0.000035896832,0.0015423804],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9987316,0.00006164001,0.00034982723,0.00032008058,0.00023439022,0.00030242087],"domain_scores_gemma":[0.99952316,0.00000845577,0.000052766263,0.00026930464,0.000038554408,0.000107756314],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012803118,0.00016570896,0.00032999442,0.00020750804,0.000030535553,0.000012967471,0.000056812096,0.000112370864,0.000051986914],"category_scores_gemma":[0.000011779055,0.0001771472,0.00006114017,0.0002365485,0.000028345075,0.00017192158,0.00004614961,0.00007764898,0.000025814581],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011998888,0.00033688004,0.008652391,0.0000199399,0.0000027593785,0.00028962494,0.0010017304,0.0003879034,0.9873435,0.000039254577,0.000014215306,0.001791804],"study_design_scores_gemma":[0.0053653507,0.0010050783,0.00071177684,0.00010108834,0.000013610481,0.00003010987,0.00052029575,0.0011438471,0.9909037,0.00006535911,0.0000029994303,0.00013683503],"about_ca_topic_score_codex":0.000030978885,"about_ca_topic_score_gemma":0.00040205297,"teacher_disagreement_score":0.007940614,"about_ca_system_score_codex":0.00009250503,"about_ca_system_score_gemma":0.000074471965,"threshold_uncertainty_score":0.72238535},"labels":[],"label_agreement":null},{"id":"W4388099687","doi":"10.1016/j.gene.2023.147927","title":"Characterization of a partially saturated and glycosylated apocarotenoid from wheat that is depleted upon leaf rust infection","year":2023,"lang":"en","type":"article","venue":"Gene","topic":"Plant-Microbe Interactions and Immunity","field":"Agricultural and Biological Sciences","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan; Saskatchewan Research Council (Canada); Plant Biotechnology Institute; National Research Council Canada; Natural Sciences and Engineering Research Council of Canada","funders":"","keywords":"Biology; Rust (programming language); Haustorium; Metabolite; Biochemistry; Wheat leaf rust; Metabolomics; Gene; Transcriptome; Paeonia lactiflora; Host (biology); Botany; Gene expression; Genetics; Virulence","score_opus":0.02600764957959569,"score_gpt":0.21499102147080437,"score_spread":0.18898337189120867,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4388099687","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99877006,0.000025178813,0.000010025055,0.00042994297,0.00016666141,0.00011703743,0.00036964877,0.000087790075,0.000023670045],"genre_scores_gemma":[0.99730945,0.00034145676,0.000010461291,0.00009701599,0.000060026116,0.0000058669193,0.0020927105,0.0000010105358,0.000082028164],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9994447,0.000057765552,0.00014260906,0.00015248703,0.00007309764,0.00012931548],"domain_scores_gemma":[0.99973637,0.000041809675,0.00008535351,0.000045813234,0.000055072644,0.000035566754],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00006499937,0.00008646909,0.00011912216,0.000021065269,0.00013401743,0.000043291067,0.000054036704,0.000087065324,0.00023827376],"category_scores_gemma":[0.000015851925,0.00003939808,0.000034308774,0.00034662802,0.000016411708,0.0001411739,0.000041376978,0.000078531164,0.000044110817],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00004904203,0.000020777294,0.0046050334,0.0000022747872,0.00001985916,0.0000010720256,0.000071855495,0.0000020564794,0.9802419,7.9965804e-7,0.0000987778,0.014886569],"study_design_scores_gemma":[0.000072644856,0.000057636964,0.46036118,0.000013978581,0.000010446768,0.000003578324,0.000020734438,0.00041334776,0.5356903,0.000013283602,0.0032832923,0.000059590835],"about_ca_topic_score_codex":0.002678069,"about_ca_topic_score_gemma":0.0008996675,"teacher_disagreement_score":0.45575616,"about_ca_system_score_codex":0.000011555859,"about_ca_system_score_gemma":0.0000043452724,"threshold_uncertainty_score":0.4048457},"labels":[],"label_agreement":null},{"id":"W4388336883","doi":"10.1016/j.gene.2023.147969","title":"GhTPPA_2 enhancement of tobacco sugar accumulation and drought tolerance","year":2023,"lang":"en","type":"article","venue":"Gene","topic":"Plant nutrient uptake and metabolism","field":"Agricultural and Biological Sciences","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Biotechnology Research Institute","funders":"National Major Science and Technology Projects of China; National Natural Science Foundation of China","keywords":"Biology; Trehalose; Sugar; Jasmonic acid; Abscisic acid; Abiotic stress; Transcriptome; Carbohydrate metabolism; Salicylic acid; Photosynthesis; Biochemistry; Metabolism; Mannitol; Botany; Gene; Gene expression","score_opus":0.04086566018361946,"score_gpt":0.25112036324654363,"score_spread":0.21025470306292418,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4388336883","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9983848,0.00067960535,0.000004234457,0.00031502562,0.000119901364,0.000078560945,0.00002887847,0.000026516338,0.0003624995],"genre_scores_gemma":[0.9971401,0.0018317768,0.000066067005,0.00008452798,0.00013393785,0.0000054135025,0.000085887696,2.7844553e-7,0.0006519967],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9995538,0.000012694886,0.00010226277,0.000117283074,0.00009766269,0.00011627973],"domain_scores_gemma":[0.9998513,0.00003335618,0.000038868395,0.000026211377,0.000020422147,0.000029827901],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009539163,0.0000486653,0.00008669002,0.0000074227187,0.000048483584,0.000008830211,0.0000569731,0.000029955794,0.00006841575],"category_scores_gemma":[0.000008832806,0.00001910583,0.000021230542,0.00021622484,0.000012971565,0.000050567964,0.000023093728,0.0000201314,0.000035739984],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000010034891,0.000013188163,0.0048406054,0.0000016790126,0.0000030274439,9.530503e-7,0.000046941004,0.0000051899833,0.91778404,0.00019200632,0.00061096903,0.07649134],"study_design_scores_gemma":[0.00013805152,0.00005426071,0.3437677,0.000010728753,0.000006620099,0.0000013731466,0.00004579154,0.00010389507,0.47660857,0.00034126348,0.17883292,0.000088813766],"about_ca_topic_score_codex":0.000026988198,"about_ca_topic_score_gemma":0.000027308932,"teacher_disagreement_score":0.4411755,"about_ca_system_score_codex":0.0000023625892,"about_ca_system_score_gemma":0.0000017887189,"threshold_uncertainty_score":0.07791132},"labels":[],"label_agreement":null},{"id":"W4388562515","doi":"10.1016/j.gene.2023.147984","title":"Characterization and transcript expression analyses of four Atlantic salmon (Salmo salar) serpinh1 paralogues provide evidence of evolutionary divergence","year":2023,"lang":"en","type":"article","venue":"Gene","topic":"Animal Genetics and Reproduction","field":"Biochemistry, Genetics and Molecular Biology","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Memorial University of Newfoundland","funders":"Innovation NL; Natural Sciences and Engineering Research Council of Canada; Atlantic Canada Opportunities Agency","keywords":"Salmo; Biology; Gene; Genetics; In silico; Phenotype; Gene duplication; Fishery; Fish <Actinopterygii>","score_opus":0.04921513523145027,"score_gpt":0.293031786115527,"score_spread":0.24381665088407672,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4388562515","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9948961,0.0023175243,0.0023938569,0.0000905626,0.00011443325,0.00015115697,0.000020539104,0.000011824394,0.000004001628],"genre_scores_gemma":[0.9937593,0.0051075993,0.00054951897,0.000009400767,0.000120813165,0.000009986011,0.00022641142,0.000010610319,0.00020635629],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9991598,0.00005203389,0.00022891769,0.00030313546,0.000135256,0.000120822544],"domain_scores_gemma":[0.9995039,0.0000070209944,0.00013074509,0.00021128285,0.00011148418,0.000035538793],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000117477415,0.000096552525,0.0001362717,0.000059528225,0.000049202743,0.00000445099,0.0000879006,0.000082509745,0.0000047754443],"category_scores_gemma":[0.00005891418,0.00008441431,0.000054988534,0.0001719289,0.00007629528,0.00000942714,0.00007286053,0.000030267758,0.0000019795339],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011501964,0.000022043489,0.024058137,0.00011795724,0.000023315943,0.0000012370476,0.00005611984,0.00018346512,0.9746757,0.000003438535,0.000107576874,0.0006359971],"study_design_scores_gemma":[0.00008267325,0.000229566,0.19993973,0.00007042181,0.000027658172,0.0000067510473,0.000023310315,0.00025655027,0.79888636,0.00001910717,0.0003815597,0.000076318844],"about_ca_topic_score_codex":0.00003754759,"about_ca_topic_score_gemma":0.0000037153281,"teacher_disagreement_score":0.17588158,"about_ca_system_score_codex":0.0000035966793,"about_ca_system_score_gemma":0.000032809457,"threshold_uncertainty_score":0.34423155},"labels":[],"label_agreement":null},{"id":"W4388914898","doi":"10.1016/j.gene.2023.148020","title":"Association of RARRES2 rs17173608 gene polymorphism and serum Chemerin with acute myocardial infarction and its risk factors: A case-control study in an Iranian population","year":2023,"lang":"en","type":"article","venue":"Gene","topic":"Adipokines, Inflammation, and Metabolic Diseases","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"Zanjan University of Medical Sciences","keywords":"Chemerin; Genotype; Internal medicine; Population; Biology; Gene polymorphism; Myocardial infarction; Endocrinology; Adipokine; Gastroenterology; Immunology; Insulin resistance; Medicine; Diabetes mellitus; Gene; Genetics","score_opus":0.012025376886837774,"score_gpt":0.2571825752993204,"score_spread":0.24515719841248265,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4388914898","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.998454,0.00019539332,0.000021620352,0.0001064492,0.00009484744,0.0008273838,0.00023561061,0.000057637582,0.0000070784167],"genre_scores_gemma":[0.9992507,0.00018202169,0.000047896705,0.00002594944,0.00022728532,0.000034340235,0.00013142744,0.000020294348,0.000080055346],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9989221,0.00012201494,0.0002849985,0.00023789595,0.00025315862,0.0001798394],"domain_scores_gemma":[0.999398,0.000038923023,0.00020539084,0.00014351489,0.000093703165,0.00012049406],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00032615295,0.0001435295,0.00032923292,0.00023533835,0.00008117776,0.000016675202,0.00002350163,0.0000781926,0.000013927619],"category_scores_gemma":[0.00008247981,0.00012317824,0.0000303009,0.00030881137,0.0000133054955,0.0002223097,0.000014793994,0.00007920436,0.000001456062],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00034108266,0.00009172876,0.98324144,0.000020383835,0.00042754633,0.00008540478,0.002011106,0.00011081723,0.010776997,0.0000024280139,0.000006716074,0.0028843665],"study_design_scores_gemma":[0.0048622256,0.00032495547,0.9905142,0.0000123200225,0.0010262766,0.000059305803,0.00049211166,0.0012289147,0.0013323512,0.000013018176,0.000018906632,0.000115399496],"about_ca_topic_score_codex":0.0010571463,"about_ca_topic_score_gemma":0.0006992206,"teacher_disagreement_score":0.009444646,"about_ca_system_score_codex":0.000048703972,"about_ca_system_score_gemma":0.00004123996,"threshold_uncertainty_score":0.5023063},"labels":[],"label_agreement":null},{"id":"W4389080624","doi":"10.1016/j.gene.2023.148039","title":"Genome-wide identification of microsatellites for mapping, genetic diversity and cross-transferability in wheat (Triticum spp)","year":2023,"lang":"en","type":"article","venue":"Gene","topic":"Wheat and Barley Genetics and Pathology","field":"Agricultural and Biological Sciences","cited_by":11,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Western University","funders":"National Agri-Food Biotechnology Institute; Council of Scientific and Industrial Research, India; Department of Biotechnology, Ministry of Science and Technology, India","keywords":"Biology; Genetics; Microsatellite; Genetic diversity; Locus (genetics); Population; Genome; Genetic marker; Allele; Gene","score_opus":0.030671796860876274,"score_gpt":0.2392552884447756,"score_spread":0.20858349158389933,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4389080624","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9986892,0.0005426511,0.00005133194,0.00023467896,0.00006929521,0.00024390926,0.00013946228,0.000015576954,0.000013923887],"genre_scores_gemma":[0.9991143,0.00045743122,0.00012477787,0.000029336003,0.00004986481,0.000011088414,0.00009408975,6.129107e-7,0.00011850069],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9992818,0.000030393508,0.00021739297,0.00022865733,0.000060815397,0.00018092674],"domain_scores_gemma":[0.9997267,0.000108456166,0.000028308274,0.000046392128,0.00005344188,0.000036667538],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00030525526,0.000068903355,0.00013007548,0.00002048012,0.00021095749,0.000019283978,0.00010887792,0.00007137692,0.000026065803],"category_scores_gemma":[0.000024175202,0.000035053865,0.000048240112,0.00020591945,0.00008755634,0.000023727987,0.00010501935,0.000030651874,0.000005858573],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000096634,0.000016233173,0.39096072,0.000018858578,0.000001904402,8.003619e-7,0.00015316145,0.00000768609,0.6067789,0.0000034604775,0.000004875249,0.002043746],"study_design_scores_gemma":[0.00012639095,0.00007221361,0.8833626,0.0000027379397,0.0000042840747,0.0000011719402,0.000052729756,0.000040264433,0.114588104,0.0013143863,0.00036911303,0.00006604223],"about_ca_topic_score_codex":0.00008485736,"about_ca_topic_score_gemma":0.0001990705,"teacher_disagreement_score":0.49240184,"about_ca_system_score_codex":0.000006702283,"about_ca_system_score_gemma":0.0000031300644,"threshold_uncertainty_score":0.16225357},"labels":[],"label_agreement":null},{"id":"W4389956165","doi":"10.1016/j.gene.2023.148099","title":"Intron retention is a mechanism of erythropoietin regulation in brain cell models","year":2023,"lang":"en","type":"article","venue":"Gene","topic":"RNA Research and Splicing","field":"Biochemistry, Genetics and Molecular Biology","cited_by":4,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph; University of Calgary; Saint John Regional Hospital; Dalhousie University","funders":"Natural Sciences and Engineering Research Council of Canada; National Institutes of Health","keywords":"Intron; Biology; Erythropoietin; Erythropoiesis; Ischemia; Gene expression; Internal medicine; Endocrinology; Kidney; Gene; Cell biology; Genetics","score_opus":0.018641062184957983,"score_gpt":0.26204476050373415,"score_spread":0.24340369831877617,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4389956165","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.990485,0.000099626435,0.008440272,0.00049791863,0.000030126559,0.00011400131,0.000008302886,0.000007289979,0.00031744796],"genre_scores_gemma":[0.9953411,0.00021228859,0.00051351485,0.000059537735,0.000044524524,0.000009776298,0.00013249835,0.0000099181825,0.0036767947],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99939185,0.000039797505,0.00012942449,0.00016805848,0.00011303319,0.00015782169],"domain_scores_gemma":[0.99971396,0.0000037518193,0.000037035206,0.00017126166,0.000045342713,0.00002865403],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002766426,0.00005200005,0.00006807247,0.00007349393,0.000020325515,0.00000511322,0.000068134425,0.00007809642,0.000018589262],"category_scores_gemma":[0.00002586669,0.00005345114,0.00003477974,0.00018298329,0.000015496857,0.000002989126,0.00006339594,0.00003830484,0.000012443303],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000026359266,0.000012073077,0.000042596756,0.00001699192,0.0000039914603,0.0000010867564,0.00005154673,0.0006334981,0.9953507,0.00020302842,0.0025558777,0.0011022105],"study_design_scores_gemma":[0.00035170122,0.00011833334,0.0007098653,0.000008144886,0.0000015806814,8.148008e-7,0.00005092805,0.020017533,0.9755698,0.002921946,0.0001933521,0.000056037992],"about_ca_topic_score_codex":0.000046633828,"about_ca_topic_score_gemma":0.000025973852,"teacher_disagreement_score":0.019780977,"about_ca_system_score_codex":0.000009867209,"about_ca_system_score_gemma":0.000028726907,"threshold_uncertainty_score":0.21796742},"labels":[],"label_agreement":null},{"id":"W4390694161","doi":"10.1016/j.gene.2024.148131","title":"IKZF3/Aiolos H195Y mutation identified in a mouse model of B cell leukemia results in altered DNA binding and altered STAT5-dependent gene expression","year":2024,"lang":"en","type":"article","venue":"Gene","topic":"Acute Lymphoblastic Leukemia research","field":"Medicine","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Children’s Health Research Institute; Lawson Health Research Institute; Western University","funders":"Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research","keywords":"Biology; Gene; Molecular biology; Transcription factor; Genetics","score_opus":0.03186410228649769,"score_gpt":0.2966858099308853,"score_spread":0.2648217076443876,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4390694161","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9954689,0.00034574044,0.002583916,0.00009112454,0.00014935051,0.00084381655,0.00027808378,0.00005393894,0.00018512255],"genre_scores_gemma":[0.9922371,0.00032929087,0.00484675,0.00003496679,0.00010625016,0.00009232177,0.0002387459,0.00005419892,0.0020603829],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99731153,0.00012440598,0.0008253579,0.0006624708,0.00061324006,0.000462968],"domain_scores_gemma":[0.99900484,0.00020740074,0.000119462915,0.000414054,0.000079558806,0.00017466831],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00078674953,0.00022569383,0.00041799125,0.00077330455,0.000034337558,0.000048667258,0.0001506666,0.00019547177,0.00001615564],"category_scores_gemma":[0.00020340108,0.00020413229,0.00005720986,0.0003827257,0.00007024121,0.00019329417,0.00019922931,0.00035467726,0.000027284921],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0012677134,0.00009148385,0.00014696387,0.0004639103,0.000024577761,0.00029547818,0.002729933,0.0051290407,0.9881542,0.000004469001,0.00033487144,0.0013574056],"study_design_scores_gemma":[0.0056395857,0.00013707031,0.00028979543,0.0003481706,0.000022761591,0.000032975746,0.00024750037,0.26499364,0.7280399,0.000113759954,0.0000055564533,0.00012922793],"about_ca_topic_score_codex":0.0003572816,"about_ca_topic_score_gemma":0.00011867111,"teacher_disagreement_score":0.2601142,"about_ca_system_score_codex":0.0013954487,"about_ca_system_score_gemma":0.00085608434,"threshold_uncertainty_score":0.8324273},"labels":[],"label_agreement":null},{"id":"W4390843047","doi":"10.1016/j.gene.2024.148165","title":"LncRNAs exhibit subtype-specific expression, survival associations, and cancer-promoting effects in breast cancer","year":2024,"lang":"en","type":"article","venue":"Gene","topic":"Cancer-related molecular mechanisms research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":7,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Nova Scotia Health Authority; Dalhousie University","funders":"Canadian Institutes of Health Research","keywords":"Biology; Breast cancer; Immune system; Cancer; Metastasis; Cancer research; Gene expression profiling; Cell type; Gene expression; Gene; Cell; Immunology; Genetics","score_opus":0.010585193672956754,"score_gpt":0.28120579293879994,"score_spread":0.2706205992658432,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4390843047","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.91659296,0.07769006,0.002570882,0.0012501382,0.0009929212,0.0004451198,0.00022618024,0.00004618209,0.00018555255],"genre_scores_gemma":[0.9880176,0.01038998,0.00021433353,0.000073368115,0.0005642186,0.00016685824,0.00009548662,0.000055260123,0.00042287237],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9985648,0.00012034446,0.00018402096,0.00052707555,0.00023864803,0.00036513657],"domain_scores_gemma":[0.999529,0.000027385277,0.000040487917,0.00022492332,0.00007575349,0.00010245206],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00027036143,0.00016384524,0.00016153016,0.000099179895,0.00008200827,0.00008005944,0.00013084897,0.00020277679,0.00007223916],"category_scores_gemma":[0.000034996312,0.00016360429,0.000056276287,0.0002588364,0.000035277266,0.000007093788,0.00016647602,0.0002275943,0.000009644518],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000033566044,0.00001927664,0.00094814197,0.00007457334,0.000044785484,0.000039161718,0.00009473746,0.00009840776,0.97463894,0.0000501819,0.0013749322,0.022583304],"study_design_scores_gemma":[0.00051882584,0.000039528255,0.00510578,0.00020909164,0.0000145294225,0.000022547823,0.00002274682,0.00038732018,0.98122627,0.00009840949,0.012124058,0.00023091034],"about_ca_topic_score_codex":0.00036598596,"about_ca_topic_score_gemma":0.0002649635,"teacher_disagreement_score":0.071424656,"about_ca_system_score_codex":0.00013614752,"about_ca_system_score_gemma":0.00021067435,"threshold_uncertainty_score":0.6671589},"labels":[],"label_agreement":null},{"id":"W4393313056","doi":"10.1016/j.gene.2024.148420","title":"Chronic sleep fragmentation reduces left ventricular contractile function and alters gene expression related to innate immune response and circadian rhythm in the mouse heart","year":2024,"lang":"en","type":"article","venue":"Gene","topic":"Circadian rhythm and melatonin","field":"Neuroscience","cited_by":9,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"National Natural Science Foundation of China","keywords":"Biology; Circadian rhythm; Internal medicine; Endocrinology; CLOCK; Circadian clock; Cardiac function curve; Sleep (system call); Heart failure; Medicine","score_opus":0.011186834176923014,"score_gpt":0.24981937183625683,"score_spread":0.23863253765933382,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4393313056","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9888458,0.008003583,0.00007130157,0.0021263338,0.00035669337,0.00050097104,0.00001491785,0.000057116576,0.000023282144],"genre_scores_gemma":[0.9988004,0.00033284025,0.00004344955,0.00043850145,0.00008078967,0.000041497737,0.000010248497,0.000020671565,0.00023158651],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9985749,0.00031507006,0.00023032397,0.00043556603,0.00018408055,0.00026007206],"domain_scores_gemma":[0.99946326,0.00019235305,0.000040127423,0.00019669624,0.000010793386,0.00009679086],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00053303805,0.00013288017,0.00012758416,0.0002268524,0.00016473969,0.00014251583,0.00006148775,0.00008511474,0.000033087224],"category_scores_gemma":[0.000113565286,0.00010968492,0.000032815875,0.00032913577,0.000055532917,0.00025776727,0.00003632831,0.00021415243,0.000047631765],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014814439,0.000013810466,0.00015854444,0.000012664662,0.0000042045085,0.0001642681,0.001418498,0.00026785824,0.995201,0.000085114625,0.0001116971,0.0024142198],"study_design_scores_gemma":[0.00048304588,0.0001428986,0.04210825,0.000053639513,0.000014150415,0.0005721175,0.00012639492,0.00065977627,0.95035464,0.00006267482,0.0052887113,0.00013368833],"about_ca_topic_score_codex":0.000020180587,"about_ca_topic_score_gemma":0.0000030956853,"teacher_disagreement_score":0.044846322,"about_ca_system_score_codex":0.00009777805,"about_ca_system_score_gemma":0.000043873137,"threshold_uncertainty_score":0.44728214},"labels":[],"label_agreement":null},{"id":"W4396616285","doi":"10.1016/j.gene.2024.148523","title":"Gene structure, expression and function analysis of the MyoD gene in the Pacific white shrimp Litopenaeus vannamei","year":2024,"lang":"en","type":"article","venue":"Gene","topic":"Physiological and biochemical adaptations","field":"Environmental Science","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"National Key Research and Development Program of China Stem Cell and Translational Research; National Natural Science Foundation of China","keywords":"Litopenaeus; Biology; Shrimp; White (mutation); Gene; MyoD; Function (biology); Genetics; Gene expression; Penaeidae; Fishery; Decapoda; Crustacean","score_opus":0.01137127561918823,"score_gpt":0.21036242104955785,"score_spread":0.1989911454303696,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4396616285","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9985499,0.00042277234,0.00018310263,0.0002889978,0.00006371406,0.00009598968,0.00005235363,0.000008943712,0.00033427117],"genre_scores_gemma":[0.99927175,0.00005818069,0.00033796232,0.00014286353,0.00003088735,0.000008132306,0.0000302285,0.0000027549358,0.000117221774],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9993013,0.00006021836,0.00013310443,0.000222798,0.00017229942,0.000110289315],"domain_scores_gemma":[0.99971104,0.00003318769,0.000029325063,0.00019629575,0.0000037237005,0.000026460104],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000089044566,0.00007636066,0.0000967387,0.00002589374,0.0000688274,0.000023031447,0.00016645793,0.000046905745,0.00034765629],"category_scores_gemma":[0.000010549327,0.00003400678,0.00006842744,0.00074785604,0.00010304782,0.000053563046,0.00013677044,0.00009209193,0.000008236383],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000008081261,0.000020070924,0.003721141,0.0000023023022,0.000023793036,7.4679303e-7,0.00019860954,0.0016406097,0.99004316,0.000009574121,0.0002567794,0.0040751575],"study_design_scores_gemma":[0.00006996213,0.000038124006,0.6078712,0.000006564284,0.00015131885,0.0000018289115,0.00010411346,0.0036607988,0.38357395,0.0034098495,0.0010250963,0.000087187625],"about_ca_topic_score_codex":0.00004478525,"about_ca_topic_score_gemma":0.000034900007,"teacher_disagreement_score":0.60646915,"about_ca_system_score_codex":0.000018536644,"about_ca_system_score_gemma":0.0000034499583,"threshold_uncertainty_score":0.38065925},"labels":[],"label_agreement":null},{"id":"W4397008869","doi":"10.1016/j.gene.2024.148565","title":"Structural impact, ligand–protein interactions, and molecular phenotypic effects of TGF-β1 gene variants: In silico analysis with implications for idiopathic pulmonary fibrosis","year":2024,"lang":"en","type":"article","venue":"Gene","topic":"Interstitial Lung Diseases and Idiopathic Pulmonary Fibrosis","field":"Medicine","cited_by":4,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Brock University","funders":"","keywords":"Biology; In silico; Phenotype; Idiopathic pulmonary fibrosis; Gene; Genetics; Transforming growth factor; Pulmonary fibrosis; Computational biology; Fibrosis; Immunology; Cell biology; Lung; Internal medicine","score_opus":0.0061808737625676236,"score_gpt":0.2667976604177753,"score_spread":0.2606167866552077,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4397008869","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97919255,0.011670528,0.007321805,0.000531388,0.00007779228,0.0008945201,0.00022360578,0.00004687882,0.00004094367],"genre_scores_gemma":[0.9979389,0.000091586684,0.0012553331,0.000060043425,0.00012842524,0.00022886087,0.00020787818,0.000037110796,0.000051897925],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99873704,0.00004882025,0.00035586642,0.00044735635,0.00013954773,0.0002713942],"domain_scores_gemma":[0.99923915,0.00007074919,0.000081881844,0.0003363809,0.00011273834,0.00015909957],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00011746544,0.00022999127,0.0004903215,0.0004424222,0.000058633275,0.000039739556,0.00008485588,0.00008713674,0.00002475585],"category_scores_gemma":[0.00004968794,0.00018023187,0.00028943838,0.0008083474,0.000072592215,0.0001480201,0.000044555414,0.00015956242,0.0000018032387],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0019109286,0.00011302792,0.0041045076,0.0012440694,0.0009168152,0.00010073787,0.00015213914,0.00016292109,0.98626703,0.0003365937,0.000015712045,0.004675527],"study_design_scores_gemma":[0.0030639996,0.008458341,0.46678114,0.0044888114,0.010423962,0.00079689367,0.0001530624,0.04648332,0.45421284,0.0039590797,0.00011161972,0.0010669328],"about_ca_topic_score_codex":0.00022608649,"about_ca_topic_score_gemma":0.000015201929,"teacher_disagreement_score":0.5320542,"about_ca_system_score_codex":0.000119108125,"about_ca_system_score_gemma":0.00015364305,"threshold_uncertainty_score":0.7349642},"labels":[],"label_agreement":null},{"id":"W4399700992","doi":"10.1016/j.gene.2024.148703","title":"Role of miRNAs in assisted reproductive technology","year":2024,"lang":"en","type":"review","venue":"Gene","topic":"Reproductive Biology and Fertility","field":"Medicine","cited_by":7,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"","keywords":"Biology; microRNA; Computational biology; Genetics; Evolutionary biology; Gene","score_opus":0.05314827356078052,"score_gpt":0.36584756917486555,"score_spread":0.31269929561408505,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4399700992","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0009868186,0.9959171,9.1225644e-7,0.00017505935,0.00026125248,0.00078000955,0.00002161498,0.0000560416,0.0018012213],"genre_scores_gemma":[0.00080286304,0.9973576,0.00031177068,0.0000060572434,0.000242214,0.00010952123,0.00007001441,0.000025665633,0.0010742629],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9982261,0.000097281976,0.00054461573,0.0008733224,0.00007920776,0.00017948782],"domain_scores_gemma":[0.9986359,0.000021435771,0.00016486777,0.0010561908,0.000092962975,0.000028650475],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004365363,0.00022997515,0.0016283223,0.00048830564,0.000010840377,0.0000014068331,0.00013022727,0.0006072942,0.000028201594],"category_scores_gemma":[0.00047352424,0.00015843248,0.0002608185,0.00087228,0.0002373073,0.000011662415,0.00011335374,0.0006256517,0.000111933194],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012087932,0.00015837666,0.00012193647,0.0068216594,0.0003319422,0.000047018286,0.000034992125,9.740129e-9,0.0015777163,0.00007426344,0.00014552967,0.99056566],"study_design_scores_gemma":[0.00012231994,0.00015217203,0.0027980618,0.0040859245,0.0011023582,0.00039565467,0.000027667287,1.5463567e-7,0.0019040819,0.0011344141,0.98813856,0.00013866115],"about_ca_topic_score_codex":0.000010771936,"about_ca_topic_score_gemma":0.0000045438924,"teacher_disagreement_score":0.990427,"about_ca_system_score_codex":0.00011267984,"about_ca_system_score_gemma":0.00027959276,"threshold_uncertainty_score":0.64606893},"labels":[],"label_agreement":null},{"id":"W4399761530","doi":"10.1016/j.gene.2024.148712","title":"Contribution of circulating Mfge8 to human T2DM and cardiovascular disease","year":2024,"lang":"en","type":"article","venue":"Gene","topic":"Phagocytosis and Immune Regulation","field":"Immunology and Microbiology","cited_by":6,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institute of Diabetes and Digestive and Kidney Diseases; OU College of Medicine Alumni Association; University of Oklahoma; University of Oklahoma Health Sciences Center; Children's Health Foundation; Presbyterian Health Foundation","keywords":"Biology; Disease; Computational biology; Internal medicine","score_opus":0.013608408375345257,"score_gpt":0.24433496077641612,"score_spread":0.23072655240107087,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4399761530","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.95228726,0.04589346,0.0012788023,0.00007599022,0.00021257302,0.00013089574,0.000019457191,0.000033169432,0.00006842233],"genre_scores_gemma":[0.9996554,0.00005022669,0.000020414858,0.00001659491,0.000030289093,0.000009080493,0.000105117,0.000006537646,0.000106285916],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9995145,0.000052110416,0.00013576326,0.00016161079,0.00002408523,0.00011190123],"domain_scores_gemma":[0.99974686,0.000016331862,0.00001531868,0.00016633571,0.000037763224,0.000017420765],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00018436853,0.00006206267,0.00014420187,0.000056187728,0.00007556774,0.000010243631,0.000035171834,0.00005009303,0.000044348446],"category_scores_gemma":[0.000032834552,0.000056964007,0.000099053,0.00007854541,0.000034163146,0.000042296448,0.00003813962,0.00004539838,0.000034884324],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00001110669,0.000010039621,0.00077996455,0.000022881612,0.0003054153,0.0000027655615,0.00009402286,0.000088577624,0.9798318,0.0012600673,0.0001507335,0.017442603],"study_design_scores_gemma":[0.00076509785,0.00009873871,0.16893454,0.00015006884,0.00037368527,0.000037305643,0.000039200506,0.00019785877,0.7952907,0.00071978656,0.033178054,0.00021498885],"about_ca_topic_score_codex":0.000035953766,"about_ca_topic_score_gemma":7.649512e-7,"teacher_disagreement_score":0.18454114,"about_ca_system_score_codex":0.000015552081,"about_ca_system_score_gemma":0.000014806935,"threshold_uncertainty_score":0.23229247},"labels":[],"label_agreement":null},{"id":"W4400078934","doi":"10.1016/j.gene.2024.148731","title":"Vascular calcification in chronic kidney disease associated with pathogenic variants in ABCC6","year":2024,"lang":"en","type":"article","venue":"Gene","topic":"Dermatological and Skeletal Disorders","field":"Biochemistry, Genetics and Molecular Biology","cited_by":9,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Health Sciences Centre; Sunnybrook Health Science Centre; Queen's University; London Health Sciences Centre; Victoria Hospital; McGill University; University of Toronto; Montreal Neurological Institute and Hospital; Western University","funders":"","keywords":"Biology; Kidney disease; Calcification; Kidney; Internal medicine; Genetics; Endocrinology","score_opus":0.006880367326102694,"score_gpt":0.22452737969631395,"score_spread":0.21764701237021125,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4400078934","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.991918,0.0065333326,0.00058133446,0.00031104963,0.00005625333,0.00016582392,0.000039992156,0.000018666053,0.00037553417],"genre_scores_gemma":[0.99848825,0.00043815543,0.000028683124,0.00019976449,0.000026210317,0.000047728463,0.00057652727,0.000012425819,0.00018227355],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99922734,0.000060410362,0.00013060888,0.00030070057,0.000083517276,0.00019741694],"domain_scores_gemma":[0.9997068,0.000004455036,0.000015851138,0.00016678138,0.000013675407,0.000092413684],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00010069405,0.00009840144,0.00009389169,0.000045491823,0.000016598078,0.000018516084,0.000088903194,0.00008973955,0.000027930431],"category_scores_gemma":[0.000058655565,0.00007886172,0.000052145824,0.0002170025,0.000039012342,0.0000036784925,0.000030393367,0.00007210305,0.000023717295],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011105879,0.00032837744,0.025175134,0.00014093859,0.00013970636,0.0004158275,0.000071475326,0.0010999017,0.96295565,0.0005315802,0.0013420881,0.0076882564],"study_design_scores_gemma":[0.0028019964,0.00033466308,0.9326153,0.0002889262,0.000075111064,0.0000141402,0.00003405496,0.009277582,0.020851327,0.0015002216,0.03139164,0.0008150472],"about_ca_topic_score_codex":0.000010275763,"about_ca_topic_score_gemma":0.00009200924,"teacher_disagreement_score":0.94210434,"about_ca_system_score_codex":0.00004417624,"about_ca_system_score_gemma":0.00018815031,"threshold_uncertainty_score":0.32158875},"labels":[],"label_agreement":null},{"id":"W4401538197","doi":"10.1016/j.gene.2024.148854","title":"Genetic admixture predictors of fetal alcohol spectrum disorders (FASD) in a South African population","year":2024,"lang":"en","type":"article","venue":"Gene","topic":"Prenatal Substance Exposure Effects","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Waterloo","funders":"National Institute on Alcohol Abuse and Alcoholism; National Institute on Aging; National Institutes of Health","keywords":"Biology; Population; Genetics; Genetic genealogy; Demography","score_opus":0.006901163102722468,"score_gpt":0.2319925281748719,"score_spread":0.22509136507214944,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4401538197","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.993876,0.003963276,0.00036938835,0.00032626707,0.00047324935,0.0004815882,0.00002963667,0.000099536395,0.00038108006],"genre_scores_gemma":[0.9989168,0.000035791596,0.00054014294,0.000023218696,0.0002579202,0.000023984134,0.000057793102,0.00003233537,0.0001119921],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99891376,0.000039705556,0.00024774077,0.00028687937,0.00027213257,0.00023979308],"domain_scores_gemma":[0.9995818,0.000031489915,0.000044114997,0.00024240647,0.0000082554625,0.00009189106],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00011334934,0.0001416836,0.00023926198,0.00020820809,0.000014009969,0.000009488656,0.00007233423,0.00009461707,0.00005948185],"category_scores_gemma":[0.000056060562,0.00012395442,0.00008980113,0.0004988146,0.00003563643,0.000053290107,0.000030544452,0.00018296782,0.000020673508],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00034285433,0.00016449839,0.9131194,0.0006539253,0.00020249894,0.0002676605,0.0057244506,0.00046616964,0.064608015,0.00015065707,0.00029068335,0.014009232],"study_design_scores_gemma":[0.0009457773,0.00033700725,0.98283786,0.0002459547,0.00009130659,0.00002593664,0.00008658845,0.0017317436,0.0127174035,0.0005584339,0.00026883188,0.00015313785],"about_ca_topic_score_codex":0.00010804891,"about_ca_topic_score_gemma":0.00032281817,"teacher_disagreement_score":0.069718525,"about_ca_system_score_codex":0.00009412277,"about_ca_system_score_gemma":0.000060579492,"threshold_uncertainty_score":0.50547147},"labels":[],"label_agreement":null},{"id":"W4403013973","doi":"10.1016/j.gene.2024.148970","title":"Mathematical model for understanding the relationship between diabetes and novel coronavirus","year":2024,"lang":"en","type":"article","venue":"Gene","topic":"COVID-19 Clinical Research Studies","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Innovation Cluster (Canada)","funders":"","keywords":"Biology; Coronavirus; Computational biology; Coronavirus disease 2019 (COVID-19); Diabetes mellitus; Virology; Infectious disease (medical specialty); Internal medicine; Disease; Endocrinology","score_opus":0.503197623884556,"score_gpt":0.5004264164641774,"score_spread":0.0027712074203786186,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4403013973","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.11147011,0.00053068297,0.8716981,0.01547857,0.00002679999,0.00048238167,0.000056486326,0.00005517039,0.00020174336],"genre_scores_gemma":[0.9960484,0.000022145425,0.0023448719,0.00031323018,0.00014395664,0.0000539322,0.000007144293,0.000014028488,0.0010523052],"study_design_codex":"theoretical_or_conceptual","study_design_gemma":"theoretical_or_conceptual","domain_scores_codex":[0.99930125,0.000010960754,0.0001575174,0.00016425303,0.00018285052,0.0001831488],"domain_scores_gemma":[0.9802635,0.019486358,0.000012098921,0.00013707577,0.000022878981,0.0000781398],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.00065629714,0.00006613305,0.00015266222,0.0000366913,0.00013749259,0.000031404168,0.000045498422,0.000045004486,0.000007749251],"category_scores_gemma":[0.0101962555,0.00003956608,0.00005865666,0.00008926115,0.00014612277,0.000028457946,0.000080146776,0.00016376036,0.000012151398],"study_design_candidate":"theoretical_or_conceptual","study_design_consensus":"theoretical_or_conceptual","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013232429,0.00015018838,0.26791316,0.0056317863,0.00083938794,0.000009327367,0.003355811,0.0005085444,0.0057522217,0.7022083,0.003173163,0.010325805],"study_design_scores_gemma":[0.0005423944,0.000110394816,0.023200387,0.00020403934,0.00020738649,4.954054e-7,0.00009226718,0.48623624,0.0000861508,0.48894155,0.00030383415,0.000074845],"about_ca_topic_score_codex":7.9946506e-7,"about_ca_topic_score_gemma":7.8547265e-7,"teacher_disagreement_score":0.8845783,"about_ca_system_score_codex":0.00009776813,"about_ca_system_score_gemma":0.00008494344,"threshold_uncertainty_score":0.9981413},"labels":[],"label_agreement":null},{"id":"W4404297213","doi":"10.1016/j.gene.2024.149082","title":"Intergenerational effects of maternal rate of body weight gain on the multi-omics hepatic profiles of bovine fetuses","year":2024,"lang":"en","type":"article","venue":"Gene","topic":"Birth, Development, and Health","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"","keywords":"Biology; Fetus; Omics; Body weight; Physiology; Endocrinology; Internal medicine; Pregnancy; Bioinformatics; Genetics","score_opus":0.019289519231065227,"score_gpt":0.2853800164909036,"score_spread":0.26609049725983835,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4404297213","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9967537,0.00070198404,0.0007905663,0.0008272167,0.00038860535,0.00035566028,0.00003634484,0.00001372471,0.00013220939],"genre_scores_gemma":[0.99204963,0.0038584892,0.0034108337,0.00029084677,0.00012868787,0.000021215923,0.000035231427,0.000015080287,0.0001900097],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99923676,0.00006116681,0.00032481115,0.00012008526,0.00014677629,0.000110418005],"domain_scores_gemma":[0.99953085,0.000121068144,0.00009440359,0.00014047406,0.000073397554,0.00003981623],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00026756123,0.000090540714,0.00022594591,0.0000853738,0.000021667656,0.000003928175,0.00006196886,0.000041473493,0.00008799979],"category_scores_gemma":[0.00006692244,0.000055155953,0.000053011885,0.00009077682,0.00005172716,0.000016396938,0.000024838657,0.000085104475,0.000012034196],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00024516848,0.00019896809,0.026500529,0.0032422254,0.00019325907,0.000016492368,0.0006286399,0.000005808601,0.94579613,0.020540068,0.001873565,0.000759173],"study_design_scores_gemma":[0.00050490466,0.00034026525,0.058351174,0.0005893833,0.00004238766,0.0000061802143,0.000012551852,0.0032140906,0.9362079,0.00057284883,0.00011317685,0.00004514626],"about_ca_topic_score_codex":0.000055537887,"about_ca_topic_score_gemma":0.000016435286,"teacher_disagreement_score":0.031850647,"about_ca_system_score_codex":0.000029878569,"about_ca_system_score_gemma":0.00022940828,"threshold_uncertainty_score":0.22491944},"labels":[],"label_agreement":null},{"id":"W4404851334","doi":"10.1016/j.gene.2024.149129","title":"MicroRNA-34a-5p regulates agouti-related peptide via krüppel-like factor 4 and is disrupted by bisphenol A in hypothalamic neurons","year":2024,"lang":"en","type":"article","venue":"Gene","topic":"MicroRNA in disease regulation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Biology; Krüppel; microRNA; Bisphenol A; Peptide; Cell biology; Internal medicine; Endocrinology; Transcription factor; Genetics; Gene; Biochemistry","score_opus":0.005642452941233005,"score_gpt":0.2234753997772777,"score_spread":0.2178329468360447,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4404851334","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98598725,0.012596598,0.00022304854,0.00033469693,0.00018713671,0.0002926268,0.0002555037,0.000052119423,0.00007102337],"genre_scores_gemma":[0.9969842,0.00030241392,0.0002147258,0.00019042526,0.00005915807,0.000019157016,0.00046243705,0.000063032196,0.0017044878],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99855185,0.00006204101,0.0003032383,0.0006336595,0.000111980386,0.00033721238],"domain_scores_gemma":[0.9994078,0.000014810027,0.00005828871,0.00037382168,0.000030486495,0.0001147758],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00006869044,0.00025672914,0.00017803929,0.00009702539,0.00005372187,0.00006611445,0.00014203001,0.00022845893,0.00009581721],"category_scores_gemma":[0.000020035108,0.0002582724,0.00009396073,0.00021274312,0.00009959344,0.000009986765,0.00013205525,0.00012791889,0.000045174715],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000028377784,0.000040901086,0.0011154311,0.00004663524,0.00007712785,0.000019385525,0.00013459289,0.000017328939,0.99095005,0.000003297011,0.004499496,0.0030673773],"study_design_scores_gemma":[0.00057829224,0.00008257349,0.024235908,0.000050996634,0.000047310714,0.00008175978,0.00001886327,0.0011970174,0.9565591,0.00015210462,0.016632643,0.00036341787],"about_ca_topic_score_codex":0.000048682217,"about_ca_topic_score_gemma":0.000030910345,"teacher_disagreement_score":0.034390934,"about_ca_system_score_codex":0.000040425934,"about_ca_system_score_gemma":0.000059898473,"threshold_uncertainty_score":0.99998695},"labels":[],"label_agreement":null},{"id":"W4405516055","doi":"10.1016/j.gene.2024.149158","title":"Genetic polymorphisms, methylation, and expression levels in the GSTP1 and MGMT genes in urothelial bladder tumors","year":2024,"lang":"en","type":"article","venue":"Gene","topic":"Epigenetics and DNA Methylation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; McGill University Health Centre","funders":"Conselho Nacional de Desenvolvimento Científico e Tecnológico; Coordenação de Aperfeiçoamento de Pessoal de Nível Superior","keywords":"Biology; GSTP1; Methylation; Gene; Cancer research; DNA methylation; Genetics; Epigenetics; Gene expression; Genotype","score_opus":0.014305890236715035,"score_gpt":0.2609633276455454,"score_spread":0.2466574374088304,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4405516055","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9453439,0.0524371,0.0015603453,0.00024973354,0.00008513562,0.00018830567,0.00001527441,0.000005996101,0.00011421812],"genre_scores_gemma":[0.9961255,0.0020424041,0.0013647146,0.000101467966,0.00020470825,0.000028471406,0.000020833988,0.000018319512,0.00009357124],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99906164,0.00012314503,0.00020757334,0.00033239828,0.00010874737,0.00016646931],"domain_scores_gemma":[0.9997037,0.000031053478,0.000027146047,0.00018371202,0.000017057186,0.00003734469],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00032999905,0.00012641137,0.00009886794,0.000091941525,0.00004595868,0.000058970043,0.00008596379,0.00010851324,0.000010939983],"category_scores_gemma":[0.000031457635,0.0000966072,0.00002391255,0.00012420371,0.000055097466,0.000005275012,0.00006848972,0.00007945228,0.0000022832699],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000106352545,0.000012873776,0.00753965,0.000013870863,0.000006628529,0.000010850921,0.00031453016,0.00012583549,0.97843176,0.000035027522,0.00003102542,0.013467324],"study_design_scores_gemma":[0.0003504584,0.000095597556,0.19527787,0.000029236442,0.000011375857,0.000016331926,0.00007701519,0.00054675364,0.7967934,0.0013683209,0.005255886,0.00017777398],"about_ca_topic_score_codex":0.000053778313,"about_ca_topic_score_gemma":0.00010986549,"teacher_disagreement_score":0.18773822,"about_ca_system_score_codex":0.00000667487,"about_ca_system_score_gemma":0.000041857755,"threshold_uncertainty_score":0.39395273},"labels":[],"label_agreement":null},{"id":"W4407173110","doi":"10.1016/j.gene.2025.149317","title":"Genome wide analysis of allele-specific circular RNAs in mammals and their role in cell proliferation","year":2025,"lang":"en","type":"article","venue":"Gene","topic":"Circular RNAs in diseases","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"National Key Research and Development Program of China; Yunnan Provincial Science and Technology Department; Chinese Academy of Sciences; National Natural Science Foundation of China","keywords":"Biology; Genetics; Genome; Allele; Computational biology; Gene","score_opus":0.005586567557892704,"score_gpt":0.21478403001537377,"score_spread":0.20919746245748108,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4407173110","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98232174,0.015575941,0.00147529,0.000041548326,0.000015222618,0.00017843865,0.000021500162,0.0000031418938,0.00036719732],"genre_scores_gemma":[0.9985923,0.00085390813,0.000116536256,0.00008361984,0.000018794708,0.000024939796,0.00023732263,0.0000077480445,0.00006482136],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99922174,0.00006359788,0.00023341387,0.0002868243,0.000058520094,0.00013590093],"domain_scores_gemma":[0.99955994,0.000009642076,0.00005115914,0.0003136214,0.000036555542,0.000029087709],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001598938,0.00010023704,0.00019643058,0.00026950164,0.000016270855,0.0000122742895,0.000113483315,0.00008797672,0.000013309048],"category_scores_gemma":[0.000029940542,0.00010189732,0.000080733946,0.00042885155,0.000037296108,0.0000027252659,0.00007602276,0.00004210149,6.8007574e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000030481642,0.00007598294,0.14916739,0.000019544086,0.000115503135,0.0000028595823,0.0000797053,0.002335843,0.84743965,0.000014107231,0.0000129443915,0.00070599787],"study_design_scores_gemma":[0.0004124751,0.000022458751,0.39511096,0.000005533625,0.000053217023,5.97234e-7,0.00012046533,0.00034083356,0.6008549,0.00015235816,0.0028239742,0.00010225555],"about_ca_topic_score_codex":0.000021809255,"about_ca_topic_score_gemma":0.00016103595,"teacher_disagreement_score":0.24658479,"about_ca_system_score_codex":0.000020494683,"about_ca_system_score_gemma":0.00004709407,"threshold_uncertainty_score":0.4155252},"labels":[],"label_agreement":null},{"id":"W4408014920","doi":"10.1016/j.gene.2025.149372","title":"Late embryogenesis abundant gene GhLEA-5 of semi-wild cotton positively regulates salinity tolerance in upland cotton","year":2025,"lang":"en","type":"article","venue":"Gene","topic":"Research in Cotton Cultivation","field":"Agricultural and Biological Sciences","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Institute of Cancer Research; Agriculture Research System of China; Chinese Academy of Agricultural Sciences; Ministry of Agriculture and Rural Affairs of the People's Republic of China; National Natural Science Foundation of China","keywords":"Biology; Salinity; Gene; Embryogenesis; Botany; Genetics; Ecology","score_opus":0.0215738008041396,"score_gpt":0.2642514324528432,"score_spread":0.24267763164870362,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4408014920","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9967289,0.00065420783,0.000016940392,0.0013213323,0.00012096098,0.00033041308,0.0001131187,0.00003683791,0.0006773111],"genre_scores_gemma":[0.9972343,0.00039612915,0.0002647552,0.00017543761,0.00008223645,0.000024141233,0.0001272641,0.000001566767,0.0016941772],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99837625,0.00018116331,0.00040786125,0.0003844096,0.00030275498,0.00034758713],"domain_scores_gemma":[0.9991948,0.0003105705,0.00012922756,0.000109944805,0.00018180217,0.00007366268],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005456785,0.00016296662,0.00029258634,0.00004830683,0.00013021444,0.000042924647,0.00030835485,0.00014165095,0.00011138264],"category_scores_gemma":[0.00013574291,0.00007647274,0.00008259187,0.0007945248,0.00010239519,0.00011659544,0.000113133814,0.00013574379,0.000015951811],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013629801,0.00009911472,0.036272816,0.000021934738,0.000018195215,0.0000060097123,0.0000644534,0.00032446813,0.9509796,0.00004483895,0.00039362547,0.011638643],"study_design_scores_gemma":[0.0001995012,0.00007784479,0.4279916,0.00006053493,0.0000049011137,0.0000015045067,0.00003427394,0.00042802413,0.5701632,0.00020704526,0.0007360737,0.000095492585],"about_ca_topic_score_codex":0.001012503,"about_ca_topic_score_gemma":0.00065039034,"teacher_disagreement_score":0.3917188,"about_ca_system_score_codex":0.000069745045,"about_ca_system_score_gemma":0.000032651507,"threshold_uncertainty_score":0.31184676},"labels":[],"label_agreement":null},{"id":"W4408052556","doi":"10.1016/j.gene.2025.149370","title":"A multi-modal molecular characterization of the Philadelphia translocation featuring long read sequencing","year":2025,"lang":"en","type":"article","venue":"Gene","topic":"Acute Lymphoblastic Leukemia research","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hatch (Canada)","funders":"","keywords":"Biology; Chromosomal translocation; Computational biology; DNA sequencing; Genetics; Evolutionary biology; Gene","score_opus":0.0178448487776344,"score_gpt":0.2858683274282217,"score_spread":0.2680234786505873,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4408052556","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9182823,0.00016841214,0.07834473,0.0024932642,0.00010336114,0.00041633376,0.0000068450804,0.000026950094,0.00015784544],"genre_scores_gemma":[0.9969568,0.000049487477,0.0019785282,0.00022524469,0.000043105614,0.000020134132,0.000042849046,0.000013575098,0.0006702762],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9991712,0.000043135955,0.00019929023,0.00017472263,0.00024822875,0.00016339729],"domain_scores_gemma":[0.99944437,0.0000202184,0.00005701352,0.00027785066,0.00016311645,0.000037462698],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014236703,0.0000858268,0.00014712433,0.00010009865,0.000054525295,0.0000083655505,0.00011135579,0.000081017584,0.000016026537],"category_scores_gemma":[0.00010634629,0.00006485893,0.00005768059,0.00047298442,0.000055028137,0.000042410895,0.00004464778,0.00012810882,0.0000037002415],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000056426717,0.00002724919,0.00115203,0.00012057029,0.000047911715,0.000011894728,0.000232444,0.000033242588,0.99491507,0.00002641463,0.0000071676864,0.0033696005],"study_design_scores_gemma":[0.0013300421,0.000019904543,0.07886063,0.00027364076,0.00005823425,0.000028716653,0.00002810689,0.009528242,0.9097533,0.000010217314,0.000059285197,0.000049646285],"about_ca_topic_score_codex":0.00003882279,"about_ca_topic_score_gemma":0.0000050430067,"teacher_disagreement_score":0.085161716,"about_ca_system_score_codex":0.00041286077,"about_ca_system_score_gemma":0.00064098387,"threshold_uncertainty_score":0.26448703},"labels":[],"label_agreement":null},{"id":"W4409273632","doi":"10.1016/j.gene.2025.149467","title":"Unravelling the role of extracellular vesicles in cervical cancer: Mechanisms of progression, resistance, and emerging therapeutic strategies","year":2025,"lang":"en","type":"review","venue":"Gene","topic":"Extracellular vesicles in disease","field":"Biochemistry, Genetics and Molecular Biology","cited_by":12,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"Mitacs; Cancer Association of South Africa; South African Medical Research Council; National Research Foundation","keywords":"Biology; Extracellular vesicles; Extracellular; Resistance (ecology); Cancer research; Cervical cancer; Cancer; Computational biology; Microbiology; Cell biology; Genetics; Ecology","score_opus":0.012643016172975871,"score_gpt":0.3050754047448511,"score_spread":0.29243238857187526,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4409273632","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0012357017,0.9968135,0.0011341225,0.000015501348,0.00005160022,0.0005166603,0.000059822487,0.0000053080707,0.00016780713],"genre_scores_gemma":[0.025534485,0.9731207,0.00092494965,0.000007684473,0.000056300007,0.00010728858,0.000056367833,0.000033038166,0.00015919015],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99836224,0.00022432639,0.000606326,0.0004062202,0.00017484503,0.00022602582],"domain_scores_gemma":[0.9990229,0.000050580355,0.00037868504,0.00044060286,0.00006433836,0.00004288189],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00033529694,0.00027599253,0.0006415172,0.00008962112,0.000050178893,0.000018017307,0.00040275892,0.00026573185,0.000009728645],"category_scores_gemma":[0.000022678672,0.00020238852,0.00019182888,0.0002373883,0.00015281576,0.000003631734,0.00017644586,0.00016666781,2.7171484e-7],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000051606898,0.0000977047,0.0000305474,0.012312141,0.00022023547,0.000007241911,0.000082795494,0.0000350928,0.24580382,0.005100138,0.00001200768,0.73624665],"study_design_scores_gemma":[0.00059893925,0.00013644733,0.000049942195,0.018025706,0.0012738294,0.000009284614,0.00092754926,0.00007626082,0.45873085,0.020300595,0.4990405,0.0008300755],"about_ca_topic_score_codex":0.00001516607,"about_ca_topic_score_gemma":0.00004785706,"teacher_disagreement_score":0.7354166,"about_ca_system_score_codex":0.000014481023,"about_ca_system_score_gemma":0.00046341523,"threshold_uncertainty_score":0.8253164},"labels":[],"label_agreement":null},{"id":"W4411486888","doi":"10.1016/j.gene.2025.149639","title":"High glucose burden disrupts the glucose responsiveness of human pancreatic beta cells encapsulated in alginate fibers during Long-Term culture","year":2025,"lang":"en","type":"article","venue":"Gene","topic":"Pancreatic function and diabetes","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta Hospital; Alberta Hospital Edmonton","funders":"Japan Science and Technology Agency; Japan IDDM network; University of Alberta; National Center for Global Health and Medicine","keywords":"Biology; Beta cell; Cell culture; BETA (programming language); Term (time); Endocrinology; Carbohydrate metabolism; Internal medicine; Cell biology; Biochemistry; Insulin; Genetics; Islet","score_opus":0.008664033512292274,"score_gpt":0.264109377776829,"score_spread":0.25544534426453674,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4411486888","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9953346,0.0026511415,0.000013984339,0.00053210475,0.00020631778,0.0005200687,0.000015409174,0.00004917083,0.0006772065],"genre_scores_gemma":[0.99253243,0.00023608425,0.00009409184,0.00015207443,0.00006765518,0.00003650184,0.000071233306,0.000017880557,0.006792036],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9986313,0.0001414571,0.000403575,0.0003014038,0.00022068288,0.00030159144],"domain_scores_gemma":[0.99901485,0.00011873104,0.000118589895,0.0005502478,0.000113794056,0.00008378292],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00023548752,0.00020798808,0.0004884987,0.00020599483,0.00012953434,0.000018306218,0.00016336543,0.00012851274,0.00013592179],"category_scores_gemma":[0.00010223549,0.00014508641,0.000109973415,0.0005504819,0.00015751332,0.000051227504,0.00008268472,0.00019998898,0.000018978695],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0004056218,0.00008566685,0.029387673,0.00034542123,0.00016509413,0.000077409575,0.00077842607,0.00012949207,0.96802545,0.00012130484,0.00012405166,0.00035439688],"study_design_scores_gemma":[0.0020823772,0.00009171373,0.34483597,0.0004405133,0.00019468667,0.0000059133586,0.00018595002,0.000041615924,0.65190357,0.00007160148,0.00005266624,0.000093444796],"about_ca_topic_score_codex":0.00023955358,"about_ca_topic_score_gemma":0.000017562093,"teacher_disagreement_score":0.31612188,"about_ca_system_score_codex":0.0001043178,"about_ca_system_score_gemma":0.00007566242,"threshold_uncertainty_score":0.5916452},"labels":[],"label_agreement":null},{"id":"W4412710813","doi":"10.1016/j.gene.2025.149703","title":"Investigating the role of a novel hemizygous FAAH2 variant in neurological and metabolic disorders","year":2025,"lang":"en","type":"article","venue":"Gene","topic":"Cannabis and Cannabinoid Research","field":"Medicine","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Vancouver General Hospital","funders":"Ministero della Salute","keywords":"Biology; Phenotype; Genetics; Fatty acid amide hydrolase; Gene; Exome sequencing; Candidate gene","score_opus":0.012233146933127088,"score_gpt":0.27367699661261474,"score_spread":0.26144384967948764,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4412710813","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98096675,0.0046186475,0.00005388646,0.012517744,0.000026016134,0.0002340791,0.000003944578,0.000007934142,0.00157103],"genre_scores_gemma":[0.9980845,0.00017220422,0.00027571956,0.0009141274,0.000025447636,0.000034926208,0.0000016181164,0.000004909887,0.00048656925],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9993895,0.00003243742,0.00014576862,0.00014591479,0.00012702298,0.00015933724],"domain_scores_gemma":[0.99971837,0.000024946217,0.000023191187,0.00015781699,0.0000275129,0.000048142618],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00024659515,0.00006108025,0.000164837,0.00007256342,0.00003652814,0.000008290232,0.000070227616,0.00004384952,0.000013544857],"category_scores_gemma":[0.0003080874,0.000037837537,0.000032662563,0.0003025364,0.00014675932,0.000011304693,0.000096606265,0.00018035741,3.7243777e-7],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00019799024,0.0005875987,0.1675808,0.0001581887,0.00010033619,0.00003075217,0.0015214867,0.00018632774,0.63792616,0.0119414255,0.0024372872,0.17733163],"study_design_scores_gemma":[0.0032186236,0.00029857585,0.8805699,0.000072850766,0.00008675266,0.00011061944,0.00076293893,0.016394902,0.03138691,0.0042130393,0.06273644,0.00014846443],"about_ca_topic_score_codex":0.00032431033,"about_ca_topic_score_gemma":0.00008244935,"teacher_disagreement_score":0.7129891,"about_ca_system_score_codex":0.000003948112,"about_ca_system_score_gemma":0.00010196224,"threshold_uncertainty_score":0.154297},"labels":[],"label_agreement":null},{"id":"W4413100156","doi":"10.1016/j.gene.2025.149719","title":"High variability of the BoLA-DRB3 gene in Crioula Lageana cattle","year":2025,"lang":"en","type":"article","venue":"Gene","topic":"Microbial infections and disease research","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Ste. Anne's Hospital","funders":"Fundação de Amparo à Pesquisa e Inovação do Estado de Santa Catarina; Conselho Nacional de Desenvolvimento Científico e Tecnológico; Coordenação de Aperfeiçoamento de Pessoal de Nível Superior","keywords":"Biology; Breed; Genetics; Haplotype; Locus (genetics); Allele; Population; Genotype; Gene; Loss of heterozygosity; Exon","score_opus":0.00794388962013534,"score_gpt":0.2607021719322072,"score_spread":0.25275828231207187,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4413100156","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9959843,0.001093146,0.00022162768,0.00056980434,0.00051853445,0.00019171907,0.00007972244,0.000013264093,0.0013278575],"genre_scores_gemma":[0.997622,0.000045035053,0.000040500247,0.00014982236,0.000010860016,0.000009133709,0.00002673088,0.0000030097108,0.0020928655],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.999187,0.00024896636,0.00018636738,0.00016925532,0.000018194296,0.00019021171],"domain_scores_gemma":[0.99943113,0.00007467943,0.00003062409,0.00039673026,0.000056801404,0.000010034893],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003272838,0.000069399524,0.00014751745,0.00008025439,0.00009394588,0.0000054975226,0.00017735564,0.000116125084,0.0006530092],"category_scores_gemma":[0.00012468116,0.000051133982,0.00007444504,0.00031529696,0.00013195592,0.000018199522,0.00012184414,0.00016429946,0.000056315126],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000039144958,0.00020973681,0.008139623,0.000018383274,0.00004112538,6.056279e-7,0.000040134517,0.00008800712,0.9842883,0.0024730528,0.003778293,0.0008836216],"study_design_scores_gemma":[0.0006840405,0.000023676255,0.12584464,0.000016019081,0.000022466396,0.0000040964173,0.000018941819,0.0000027405113,0.86610955,0.0017886178,0.005418145,0.00006705722],"about_ca_topic_score_codex":0.0010565912,"about_ca_topic_score_gemma":0.000120553115,"teacher_disagreement_score":0.11817871,"about_ca_system_score_codex":0.00004787289,"about_ca_system_score_gemma":0.00015939867,"threshold_uncertainty_score":0.7149993},"labels":[],"label_agreement":null},{"id":"W4414533290","doi":"10.1016/j.gene.2025.149774","title":"Therapy-induced senescence in prostate cancer: mechanisms, therapeutic strategies, and clinical implications","year":2025,"lang":"en","type":"article","venue":"Gene","topic":"Telomeres, Telomerase, and Senescence","field":"Medicine","cited_by":10,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; McGill University Health Centre","funders":"Congressionally Directed Medical Research Programs; Fonds de Recherche du Québec - Santé; Associazione Italiana per la Ricerca sul Cancro; Canadian Institutes of Health Research; Generalitat de Catalunya; Fundación Científica Asociación Española Contra el Cáncer; Fundación Cellex; U.S. Department of Defense; McGill University; Faculty of Medicine, McGill University; Prostate Cancer Foundation; Agencia Estatal de Investigación","keywords":"Prostate cancer; Senescence; Disease; Mechanism (biology); Prostate; Cancer; Phenotype; Translational research; Adverse effect; Cell cycle","score_opus":0.05094674532917338,"score_gpt":0.3739027707487815,"score_spread":0.3229560254196081,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4414533290","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98465604,0.006269457,0.00078166835,0.00692412,0.0002053729,0.0007309457,0.000011995335,0.00007840639,0.00034202082],"genre_scores_gemma":[0.9848934,0.011823665,0.0006795051,0.0020812184,0.000055738583,0.000086845335,0.000011027086,0.000014634506,0.00035401265],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9987485,0.00007389569,0.0003765908,0.00040567128,0.00011389551,0.00028144746],"domain_scores_gemma":[0.999354,0.00007720023,0.000064431966,0.00031895412,0.000083334264,0.00010210032],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00026247848,0.00015771804,0.00030965972,0.00012334874,0.000082074665,0.00004280362,0.00011013134,0.00009971314,0.000023878323],"category_scores_gemma":[0.000020584903,0.00013321156,0.000050698563,0.0004259067,0.00007574312,0.0000914425,0.00003489185,0.0002306206,0.0000052718533],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002558364,0.00025977351,0.08802941,0.000058500118,0.00009371807,0.000027467497,0.00024262788,0.0000020673494,0.55637777,0.0065843877,0.000079046964,0.3479894],"study_design_scores_gemma":[0.0024750214,0.00024092803,0.9497768,0.00013511174,0.000056288452,0.000029030842,0.0004744967,0.00015579391,0.03678817,0.0074364827,0.0022197617,0.00021206873],"about_ca_topic_score_codex":0.00047926232,"about_ca_topic_score_gemma":0.00036351683,"teacher_disagreement_score":0.86174744,"about_ca_system_score_codex":0.000054587534,"about_ca_system_score_gemma":0.00066056586,"threshold_uncertainty_score":0.543221},"labels":[],"label_agreement":null},{"id":"W4415121523","doi":"10.1016/j.gene.2025.149830","title":"Reference genes selection for qRT-PCR analysis in Dendroctonus rufipennis","year":2025,"lang":"en","type":"article","venue":"Gene","topic":"Molecular Biology Techniques and Applications","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Natural Resources Canada; Canadian Forest Service; University of Alberta","funders":"Natural Sciences and Engineering Research Council of Canada; China Scholarship Council","keywords":"Reference genes; Gene; Candidate gene; SDHA; Gene expression; Facultative; Gene expression profiling","score_opus":0.010796947655994434,"score_gpt":0.30403193483227897,"score_spread":0.29323498717628455,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4415121523","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.66647226,0.00092810596,0.3302671,0.00023322782,0.000029655801,0.0003450115,0.000035339373,0.00002435345,0.0016649537],"genre_scores_gemma":[0.98410416,0.000406369,0.013001817,0.0003132262,0.00003612282,0.00035759492,0.00050516496,0.000007144034,0.0012683794],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9993096,0.000024235434,0.00015470984,0.00032424318,0.000029763813,0.00015747125],"domain_scores_gemma":[0.99962616,0.000006473216,0.000039133436,0.00024330181,0.0000622548,0.000022684342],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00010481251,0.00009127698,0.00012221905,0.00013214526,0.00006471437,0.000010420154,0.0001382054,0.0001630368,0.0000118878215],"category_scores_gemma":[0.00001784895,0.0000931072,0.00009364241,0.00042616174,0.000024980616,0.000001021866,0.00005372441,0.000043843116,0.0000018723326],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000027064838,0.000035732577,0.01106564,0.0000061372402,0.00012803984,2.1549616e-7,0.0000025745553,0.0001326729,0.9792277,0.0009910758,0.00076164096,0.0076215086],"study_design_scores_gemma":[0.00021758971,0.00007166154,0.00838271,0.0000026399805,0.00010868213,0.0000021238332,0.00000646845,0.0005263502,0.90221673,0.0004950094,0.08784827,0.00012173588],"about_ca_topic_score_codex":0.00006941693,"about_ca_topic_score_gemma":0.0006524701,"teacher_disagreement_score":0.31763193,"about_ca_system_score_codex":0.000015756734,"about_ca_system_score_gemma":0.0000459101,"threshold_uncertainty_score":0.37968016},"labels":[],"label_agreement":null},{"id":"W4417410436","doi":"10.1016/j.gene.2025.149965","title":"In vitro expression and seroreactivity of Toxoplasma gondii GRA1 protein encoded by unmodified and nucleoside-modified mRNA constructs","year":2025,"lang":"en","type":"article","venue":"Gene","topic":"Toxoplasma gondii Research Studies","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"Ege Üniversitesi","keywords":"Toxoplasma gondii; Messenger RNA; Immunogenicity; Recombinant DNA; Antibody; Western blot; Toxoplasmosis; Immune system","score_opus":0.008228974985216528,"score_gpt":0.2499430592625104,"score_spread":0.24171408427729388,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4417410436","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99528664,0.0027878282,0.000059125327,0.00046747056,0.00012104105,0.00058961613,0.00014971677,0.000029206873,0.00050938077],"genre_scores_gemma":[0.99771637,0.00020633062,0.0005436879,0.000044785917,0.0000046581645,0.000076772885,0.00003071589,0.000009567942,0.0013671124],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9986524,0.00024575423,0.0002874603,0.00040008436,0.00004916045,0.0003651627],"domain_scores_gemma":[0.99934727,0.00022405965,0.00010473449,0.00023900084,0.0000542715,0.00003066745],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002642194,0.00019628223,0.0004345278,0.0002052262,0.00013968576,0.000012652923,0.00013001797,0.0002488573,0.00001680692],"category_scores_gemma":[0.00021350768,0.00017394451,0.000031031097,0.00018694907,0.0005631915,0.00011500591,0.00033020347,0.00031833805,0.000005040513],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0007871218,0.00009811254,0.0009859019,0.000087568624,0.000080290905,0.0000049115447,0.00031687436,8.2748363e-7,0.993132,0.00024663575,0.0013280332,0.0029317017],"study_design_scores_gemma":[0.002623591,0.000077709024,0.0023604394,0.00007138456,0.000013333741,0.000014004872,0.00017892552,0.000010712668,0.99270666,0.000818248,0.0009873604,0.00013763929],"about_ca_topic_score_codex":0.00025102677,"about_ca_topic_score_gemma":0.00005575194,"teacher_disagreement_score":0.0027940625,"about_ca_system_score_codex":0.000036412774,"about_ca_system_score_gemma":0.000071450435,"threshold_uncertainty_score":0.70932513},"labels":[],"label_agreement":null},{"id":"W779207642","doi":"10.1016/j.gene.2015.06.074","title":"Fast fish face fewer mitochondrial mutations: Patterns of dN/dS across fish mitogenomes","year":2015,"lang":"en","type":"article","venue":"Gene","topic":"Mitochondrial Function and Pathology","field":"Biochemistry, Genetics and Molecular Biology","cited_by":39,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"","keywords":"Biology; Mitochondrial DNA; Evolutionary biology; Genetics; Population; Cytochrome b; Genome; Phylogenetic tree; Gene; Cytochrome c oxidase subunit I; Nuclear gene; Negative selection; Phylogenetics","score_opus":0.023776319074421834,"score_gpt":0.2776468445004616,"score_spread":0.2538705254260398,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W779207642","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98361146,0.00020526123,0.011656805,0.00034051941,0.00258213,0.00023636638,0.00070159754,0.000020009244,0.0006458589],"genre_scores_gemma":[0.97750217,0.00015825078,0.0040189847,0.001855171,0.0028398687,0.00008303784,0.0022448017,0.000058526577,0.011239191],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9988169,0.00009045767,0.00028968023,0.000363885,0.0001610085,0.0002780437],"domain_scores_gemma":[0.9991036,0.000012463668,0.00012152715,0.00041432778,0.0002022961,0.00014578042],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00010867863,0.00016552811,0.00020014413,0.000033932123,0.000065033964,0.000022351847,0.00020529139,0.00022699585,0.000107747284],"category_scores_gemma":[0.00015212683,0.00016461479,0.000121907025,0.00008371061,0.000070479575,0.0000053764074,0.00012289238,0.00006618334,0.00004000504],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002290338,0.00008848919,0.0059141396,0.000015773763,0.000069913935,0.000009442039,0.0007372012,0.00034140603,0.96283084,0.000012452592,0.027887968,0.001863316],"study_design_scores_gemma":[0.0019792577,0.00047795303,0.0022217722,0.00000790363,0.00002788907,0.00006098528,0.00093918067,0.000016428723,0.7834169,0.00004323663,0.21052453,0.00028393223],"about_ca_topic_score_codex":0.000049543003,"about_ca_topic_score_gemma":0.00034944512,"teacher_disagreement_score":0.18263656,"about_ca_system_score_codex":0.000015280475,"about_ca_system_score_gemma":0.000086396525,"threshold_uncertainty_score":0.6712796},"labels":[],"label_agreement":null},{"id":"W917839548","doi":"10.1016/j.gene.2015.07.027","title":"Dehydration triggers differential microRNA expression in Xenopus laevis brain","year":2015,"lang":"en","type":"article","venue":"Gene","topic":"MicroRNA in disease regulation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":32,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Carleton University","funders":"Natural Sciences and Engineering Research Council of Canada; Canadian Network for Research and Innovation in Machining Technology, Natural Sciences and Engineering Research Council of Canada","keywords":"Xenopus; Biology; microRNA; KEGG; Cell biology; Polyadenylation; Translation (biology); Messenger RNA; Gene expression; Bioinformatics; Genetics; Gene; Transcriptome","score_opus":0.013397412587699411,"score_gpt":0.25077061035763765,"score_spread":0.23737319776993823,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W917839548","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99621725,0.0007995902,0.002231234,0.00017804222,0.00016638632,0.00015895355,0.000010939638,0.000010872722,0.00022673649],"genre_scores_gemma":[0.9981803,0.00002008307,0.00065895065,0.000107886866,0.0002434363,0.00001560904,0.00041875974,0.000016071272,0.00033888844],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9992778,0.00005756963,0.0001621702,0.00024068964,0.00010622733,0.00015559966],"domain_scores_gemma":[0.9995753,0.0000040807136,0.000059382986,0.0002248455,0.000042958705,0.00009343243],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000111474146,0.00010215184,0.00008761853,0.000049190527,0.000024215693,0.000018509134,0.000095680305,0.00011832272,0.000021354179],"category_scores_gemma":[0.00007042057,0.00010077517,0.000054451717,0.000067867884,0.000022357975,0.0000045648876,0.000059792837,0.000040213956,0.000017373697],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000111430236,0.000043256387,0.00050266454,0.000005662441,0.0000076218903,0.000002309063,0.000049654715,0.00013589086,0.99176437,0.0000030667652,0.0061005442,0.0012735161],"study_design_scores_gemma":[0.0010047731,0.000056383775,0.0020251898,0.000010096153,0.0000068549307,0.000004439798,0.00001699206,0.00011265533,0.9865502,0.00005757294,0.010031943,0.00012289976],"about_ca_topic_score_codex":0.0000109876155,"about_ca_topic_score_gemma":0.000021277132,"teacher_disagreement_score":0.005214183,"about_ca_system_score_codex":0.000036692294,"about_ca_system_score_gemma":0.00006701225,"threshold_uncertainty_score":0.41094923},"labels":[],"label_agreement":null}]}