{"meta":{"query_hash":"7ab75677e1af","filters":{"venue":"Human Pathology"},"cohort_total":277,"direct_labels_cover":0,"predictions_cover":277,"exported":277,"export_cap":100000,"truncated":false,"label_status":"direct model label, unvalidated","prediction_status":"machine_predicted_unvalidated (Codex and Gemma teacher distillation)","score_status":"score_only:v0-immature-baseline","snapshot":{"source":"OpenAlex, pinned release, all 482 partitions","release":"2026-06-24","frame_built":"2026-07-12"},"permalink":"https://metacan.xera.ac/q/7ab75677e1af","api":"https://metacan.xera.ac/api/v1/cohort?venue=Human+Pathology"},"results":[{"id":"W115704859","doi":"10.1016/j.humpath.2009.12.008","title":"Mitogenic cardiomyopathy","year":2010,"lang":"en","type":"article","venue":"Human Pathology","topic":"Cardiomyopathy and Myosin Studies","field":"Medicine","cited_by":30,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"North York General Hospital; Hospital for Sick Children","funders":"","keywords":"Dilated cardiomyopathy; Pathogenesis; Pathology; Medicine; Respiratory distress; Autopsy; Heart failure; Endocardial fibroelastosis; Cardiomyopathy; Internal medicine","score_opus":0.017352650720266947,"score_gpt":0.29521091979892633,"score_spread":0.2778582690786594,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W115704859","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9442944,0.0004795646,0.000051372455,0.00028575343,0.0010510973,0.00018981395,0.0000068150102,0.00014221054,0.053499],"genre_scores_gemma":[0.9959741,0.000026815653,0.00052675005,0.0005691062,0.0010088163,0.000042692216,0.000017442606,0.000024216064,0.0018100649],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9990284,0.00003856396,0.00019278922,0.00031021645,0.0001297254,0.0003003012],"domain_scores_gemma":[0.99923116,0.000027151187,0.00004300891,0.0005034503,0.00008881066,0.00010643698],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00024578968,0.00014987546,0.0004162362,0.00011614831,0.00017193168,0.000008495313,0.00007812296,0.00015560283,0.00022257613],"category_scores_gemma":[0.00007866769,0.00013275992,0.00024679673,0.000101765676,0.00026340908,0.000027935019,0.00009081911,0.00041033878,0.000249839],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006888592,0.00012924323,0.094363526,0.000049895123,0.00012281701,0.002969193,0.00087607396,2.140749e-7,0.8759178,0.009250183,0.00968101,0.00657117],"study_design_scores_gemma":[0.0027216368,0.00055027584,0.7594713,0.00002023303,0.00044711682,0.0114443,0.000286682,0.0000018316435,0.014281008,0.0017231451,0.20866615,0.00038631586],"about_ca_topic_score_codex":0.000007665993,"about_ca_topic_score_gemma":0.000027686881,"teacher_disagreement_score":0.86163676,"about_ca_system_score_codex":0.000013438686,"about_ca_system_score_gemma":0.000031569027,"threshold_uncertainty_score":0.5413792},"labels":[],"label_agreement":null},{"id":"W1195222331","doi":"10.1016/j.humpath.2015.08.005","title":"Simplified 2-tier histologic grading system accurately predicts outcomes in goblet cell carcinoid of the appendix","year":2015,"lang":"en","type":"article","venue":"Human Pathology","topic":"Intraperitoneal and Appendiceal Malignancies","field":"Medicine","cited_by":39,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"BC Cancer Agency; Vancouver General Hospital; University of British Columbia","funders":"","keywords":"Medicine; Histology; Grading (engineering); Proportional hazards model; Population; Hazard ratio; Pathology; Internal medicine; Radiology; Biology","score_opus":0.07198325218518947,"score_gpt":0.29706271988362526,"score_spread":0.2250794676984358,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1195222331","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9847218,0.00033205436,0.000008824525,0.00031862844,0.00049332564,0.00045874665,0.0000206589,0.000060806222,0.013585179],"genre_scores_gemma":[0.99821246,0.0000029773196,0.00006825553,0.000310216,0.000069609065,0.00003205458,0.000022747308,0.000019070289,0.0012626073],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9984162,0.0001820019,0.0004935099,0.0002886974,0.0002283545,0.00039123622],"domain_scores_gemma":[0.99915034,0.000051187857,0.00021691063,0.0003996847,0.000076203294,0.00010565366],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00037287216,0.00019583262,0.0006260428,0.00012760758,0.00008582978,0.000006725688,0.00024583767,0.00018635827,0.000037944636],"category_scores_gemma":[0.00006650287,0.00012324963,0.00011384103,0.0001580304,0.00026508424,0.000044672644,0.000121739606,0.00028733857,0.00006928346],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000204145,0.00041309517,0.86900246,0.0008959429,0.000032819196,0.0018410446,0.004798411,0.000030503325,0.09960481,0.01927172,0.003764724,0.0001403388],"study_design_scores_gemma":[0.008180074,0.002101253,0.9240664,0.00048528155,0.00027891216,0.002355269,0.008067242,0.00014415667,0.04732741,0.001766902,0.0046123527,0.00061475014],"about_ca_topic_score_codex":0.0001266182,"about_ca_topic_score_gemma":0.000050320763,"teacher_disagreement_score":0.055063944,"about_ca_system_score_codex":0.00014666877,"about_ca_system_score_gemma":0.000090650625,"threshold_uncertainty_score":0.50259745},"labels":[],"label_agreement":null},{"id":"W1830316101","doi":"10.1016/j.humpath.2004.09.008","title":"Proposed criteria for mixed-dust pneumoconiosis: Definition, descriptions, and guidelines for pathologic diagnosis and clinical correlation1 1The NIKKO-Symposium on Mixed-Dust Pneumoconiosis was held October 18–19, 1997, in Nikko, Tochigi, Japan, to develop diagnostic criteria for mixed-dust pneumoconiosis under the auspices of Labour Welfare Corporation, Tokyo, Japan. The Organizing Committee included Keizo Chiyotani, Koichi Honma, Yutaka Hosoda, and Hisao Shida, and participants included Zoltán Adamis, Eduardo Algranti, Toshiharu Fuyuki, Kiyonobu Kimura, Otha Linton, Michihito Mishina, Hiroshi Morikubo, Alvaro R. Osornio-Vargas, Yoshiaki Saitoh, Yasushi Shinohara, and Hiroshi Watanabe.","year":2004,"lang":"en","type":"review","venue":"Human Pathology","topic":"Occupational and environmental lung diseases","field":"Medicine","cited_by":121,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hôpital Maisonneuve-Rosemont; Université de Montréal; University of Calgary","funders":"","keywords":"Pneumoconiosis; Silicosis; Asbestosis; Medicine; Asbestos; Coal dust; Pathology; Dermatology; Lung; Metallurgy; Coal; Internal medicine; Chemistry; Materials science","score_opus":0.14412785678594578,"score_gpt":0.3848974076753201,"score_spread":0.24076955088937432,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1830316101","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.7738778,0.19479786,0.0002544075,0.0105464505,0.0010607851,0.012115428,0.0072119203,0.00012377693,0.000011595391],"genre_scores_gemma":[0.7155963,0.26163742,0.0048754527,0.0032065853,0.00095047423,0.008597327,0.004584438,0.00037672574,0.00017523224],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99030995,0.0013457608,0.003879615,0.002498734,0.0006368728,0.0013290405],"domain_scores_gemma":[0.9900446,0.0053157276,0.0018444164,0.0011328779,0.00088105473,0.000781316],"candidate_categories":["metaepi_narrow","sts","research_integrity"],"consensus_categories":["metaepi_narrow"],"category_scores_codex":[0.0026766867,0.0017819608,0.0035747546,0.0005107245,0.0021150098,0.00057204766,0.0006920973,0.0013066219,0.00007550333],"category_scores_gemma":[0.004069487,0.001325771,0.00045687842,0.0006589659,0.0014612902,0.00051219744,0.00082183036,0.0009859164,0.0000063713187],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.006831517,0.010590175,0.7656787,0.06774169,0.0049297432,0.00038366124,0.010133468,0.00030134452,0.004010543,0.022986691,0.06270354,0.043708887],"study_design_scores_gemma":[0.013108993,0.0068562725,0.84473944,0.016690481,0.010385278,0.0010303098,0.004482224,0.00031571358,0.00024784243,0.0055041383,0.09289284,0.0037464472],"about_ca_topic_score_codex":0.0005302447,"about_ca_topic_score_gemma":0.0023342047,"teacher_disagreement_score":0.079060726,"about_ca_system_score_codex":0.0004209056,"about_ca_system_score_gemma":0.00044040292,"threshold_uncertainty_score":0.99998987},"labels":[],"label_agreement":null},{"id":"W1836508011","doi":"10.1016/j.humpath.2015.06.010","title":"Inverted urothelial carcinoma: a series of 12 cases with a wide morphologic spectrum overlapping with the large nested variant","year":2015,"lang":"en","type":"article","venue":"Human Pathology","topic":"Bladder and Urothelial Cancer Treatments","field":"Medicine","cited_by":23,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hôpital du Sacré-Cœur de Montréal; McGill University Health Centre","funders":"","keywords":"Desmoplasia; Pathology; Biology; Carcinoma; Squamous carcinoma; Nuclear atypia; Stroma; Medicine; Immunohistochemistry","score_opus":0.04258106611150062,"score_gpt":0.26378848993267245,"score_spread":0.22120742382117184,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1836508011","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9942174,0.00022008401,0.00030830203,0.0011087187,0.00006148777,0.0006255039,0.000058811787,0.000070337854,0.0033293457],"genre_scores_gemma":[0.9974359,0.000005245495,0.00020804345,0.0011005331,0.00011399684,0.00007320616,0.00004170083,0.00003673895,0.0009846331],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9987185,0.00014727702,0.00021183456,0.00032536854,0.00022506915,0.00037194128],"domain_scores_gemma":[0.99913037,0.000050412484,0.00014531746,0.00045502055,0.000098329816,0.00012055066],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00017264926,0.00023688877,0.00047559303,0.0000917905,0.00012746398,0.00001122806,0.00011638702,0.00009541983,0.00011625404],"category_scores_gemma":[0.000038376576,0.0001262785,0.00005246799,0.00017731778,0.00038095462,0.000072969786,0.000053180036,0.00019416661,0.000012411064],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.013745719,0.0017181933,0.8670511,0.00021672616,0.0007502398,0.06365389,0.01477751,0.0000333036,0.02538677,0.006455824,0.006093401,0.00011728844],"study_design_scores_gemma":[0.027028194,0.024464535,0.8847689,0.00018203405,0.0012934781,0.04696474,0.004396709,0.00003483507,0.0067039845,0.00095966586,0.002630382,0.00057255203],"about_ca_topic_score_codex":0.0005745642,"about_ca_topic_score_gemma":0.0020366,"teacher_disagreement_score":0.022746341,"about_ca_system_score_codex":0.00006399923,"about_ca_system_score_gemma":0.00027898635,"threshold_uncertainty_score":0.5149487},"labels":[],"label_agreement":null},{"id":"W1840448190","doi":"10.1016/j.humpath.2015.05.008","title":"Pure versus combined Merkel cell carcinomas: immunohistochemical evaluation of cellular proteins (p53, Bcl-2, and c-kit) reveals significant overexpression of p53 in combined tumors","year":2015,"lang":"en","type":"article","venue":"Human Pathology","topic":"Polyomavirus and related diseases","field":"Medicine","cited_by":33,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Horizon Health Network; Saint John Regional Hospital; Dalhousie University; Capital District Health Authority","funders":"","keywords":"Merkel cell polyomavirus; Merkel cell carcinoma; Immunohistochemistry; Merkel cell; Biology; Carcinogenesis; Pathology; Retinoblastoma protein; Carcinoma; Cancer research; Cell; Cancer; Immunology; Cell cycle; Medicine","score_opus":0.05345997202526094,"score_gpt":0.31062405757301276,"score_spread":0.25716408554775183,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1840448190","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9945305,0.0029904037,0.0000052733667,0.000054758013,0.00008915866,0.0010995077,0.000025709147,0.000020645712,0.0011840679],"genre_scores_gemma":[0.9994842,0.00001667244,0.0000774406,0.000015245826,0.000025245025,0.00006731473,0.00013768916,0.000023843095,0.00015235091],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.998005,0.0003567756,0.0006207144,0.0003266527,0.00044647808,0.00024440797],"domain_scores_gemma":[0.99875194,0.000058844642,0.00034017852,0.00041388292,0.00025889374,0.00017629079],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007174979,0.00019270732,0.0006019146,0.00019843108,0.00003766667,0.000003291576,0.00010972332,0.00026176634,0.00006516843],"category_scores_gemma":[0.00025306133,0.00016333634,0.000083804596,0.00013696673,0.00031363193,0.00004373821,0.00008405512,0.00024987402,0.0000038313856],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0022464858,0.0008507646,0.008951717,0.00023934412,0.000024319786,0.00011973938,0.0010498702,0.000010022327,0.9858316,0.00020775614,0.00039708335,0.000071285365],"study_design_scores_gemma":[0.064921714,0.007426231,0.1272989,0.0012993028,0.0010186513,0.00005064456,0.0017999082,0.00093156385,0.7913046,0.0033839834,0.000026121372,0.00053837424],"about_ca_topic_score_codex":0.00011847613,"about_ca_topic_score_gemma":0.000003155922,"teacher_disagreement_score":0.19452702,"about_ca_system_score_codex":0.000117738426,"about_ca_system_score_gemma":0.00025509967,"threshold_uncertainty_score":0.6660662},"labels":[],"label_agreement":null},{"id":"W1862221389","doi":"10.1016/j.humpath.2015.08.011","title":"Epstein-Barr virus–associated inflammatory pseudotumor presenting as a colonic mass","year":2015,"lang":"en","type":"article","venue":"Human Pathology","topic":"IgG4-Related and Inflammatory Diseases","field":"Medicine","cited_by":37,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Calgary Laboratory Services; University of Calgary","funders":"National Institutes of Health","keywords":"Inflammatory pseudotumor; Pathology; Follicular dendritic cells; Gastrointestinal tract; Lymphoma; Medicine; Virus; Inflammation; Lesion; Follicular phase; Immunology; Biology; T cell; Antigen-presenting cell; Internal medicine; Immune system","score_opus":0.028067540234107864,"score_gpt":0.2912027992972281,"score_spread":0.26313525906312024,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1862221389","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9734633,0.00049912604,0.0000042450024,0.0002510601,0.0003571229,0.00047456796,0.000014026915,0.00037982187,0.024556752],"genre_scores_gemma":[0.9921019,0.000012703672,0.000049945626,0.0007666531,0.00031805958,0.00007333584,0.00010851398,0.00006497744,0.0065039047],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99774146,0.000284486,0.00056111295,0.00044215607,0.0003460605,0.0006247535],"domain_scores_gemma":[0.9984771,0.00006069131,0.00027184864,0.00048486708,0.00026355562,0.00044195744],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00053180277,0.00027780418,0.0005235832,0.00021535216,0.000207059,0.00003014267,0.00018795034,0.0003342946,0.00054825854],"category_scores_gemma":[0.0007671991,0.00026849436,0.00017157507,0.00017222487,0.00026674013,0.00013404884,0.000102567996,0.00045852232,0.0013292945],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0010148924,0.0014556121,0.49204051,0.0004455214,0.00070274377,0.04276718,0.0073830537,0.00009295657,0.36789638,0.014503835,0.071236745,0.00046056462],"study_design_scores_gemma":[0.032329347,0.0051069506,0.8258024,0.0010097624,0.002067194,0.004538474,0.0033075437,0.0008991382,0.03759964,0.024102258,0.06045931,0.002778016],"about_ca_topic_score_codex":0.000022090791,"about_ca_topic_score_gemma":0.00002374409,"teacher_disagreement_score":0.33376187,"about_ca_system_score_codex":0.00018792547,"about_ca_system_score_gemma":0.00040957573,"threshold_uncertainty_score":0.99997675},"labels":[],"label_agreement":null},{"id":"W1963735644","doi":"10.1016/j.humpath.2008.09.017","title":"Duodenal epithelioid gastrointestinal stromal tumor with prominent granular cell features","year":2009,"lang":"en","type":"article","venue":"Human Pathology","topic":"Tumors and Oncological Cases","field":"Medicine","cited_by":4,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Surrey Memorial Hospital; Vancouver General Hospital","funders":"","keywords":"Gastrointestinal tract; Stromal tumor; Pathology; Stromal cell; Duodenum; Medicine; Mesenchymal stem cell; Epithelioid cell; Differential diagnosis; Immunohistochemistry; Biology; Internal medicine","score_opus":0.013470680744489543,"score_gpt":0.26268017141244787,"score_spread":0.24920949066795833,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1963735644","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99361527,0.00018322069,0.00015390225,0.0008040116,0.000026890673,0.00033775312,0.000010296362,0.00011404106,0.0047546043],"genre_scores_gemma":[0.9887547,0.0000019778843,0.008314973,0.0014312527,0.00030865887,0.000018440967,0.00003501207,0.000016524547,0.0011184781],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.998686,0.00006731805,0.00022757894,0.00038254695,0.00020015085,0.00043636048],"domain_scores_gemma":[0.99933356,0.000028733331,0.00010461079,0.00025782417,0.000080446036,0.00019480704],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012401088,0.0002235785,0.00041673062,0.00009443979,0.00012676977,0.000016119779,0.00010397031,0.00004332163,0.0003284642],"category_scores_gemma":[0.000035589994,0.00014453857,0.000094189054,0.000086908905,0.00019386406,0.0000326807,0.000026754558,0.00037458658,0.000039078044],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0030582303,0.0022290307,0.2711463,0.00013945023,0.0000063968178,0.18501979,0.00027802045,0.000014484112,0.5242635,0.0038114956,0.008697559,0.0013357465],"study_design_scores_gemma":[0.002673333,0.019998418,0.91003364,0.00008839711,0.00009097994,0.058436595,0.000083414874,0.000007755074,0.007348129,0.00058218767,0.00046557802,0.00019159498],"about_ca_topic_score_codex":0.0000052877,"about_ca_topic_score_gemma":0.000011217603,"teacher_disagreement_score":0.63888735,"about_ca_system_score_codex":0.000040576615,"about_ca_system_score_gemma":0.000056899513,"threshold_uncertainty_score":0.5894112},"labels":[],"label_agreement":null},{"id":"W1964142261","doi":"10.1016/j.humpath.2005.10.009","title":"Microsatellite analysis of the APC gene and immunoexpression of E-cadherin, catenin, and tubulin in esophageal squamous cell carcinoma","year":2006,"lang":"en","type":"article","venue":"Human Pathology","topic":"Wnt/β-catenin signaling in development and cancer","field":"Biochemistry, Genetics and Molecular Biology","cited_by":26,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University Health Network; University of Toronto","funders":"","keywords":"Microsatellite instability; Loss of heterozygosity; Biology; Catenin; Cadherin; Adenomatous polyposis coli; Immunohistochemistry; Cancer research; Metastasis; Pathology; Cancer; Cell adhesion molecule; Microsatellite; Gene; Cell; Colorectal cancer; Allele; Medicine; Wnt signaling pathway; Genetics; Immunology","score_opus":0.005931862856223512,"score_gpt":0.21579107616490442,"score_spread":0.2098592133086809,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1964142261","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9918643,0.0077779223,0.000021410333,0.000009455105,0.000034123237,0.000084822015,0.0000167044,0.0000021395615,0.0001891079],"genre_scores_gemma":[0.9990782,0.00008040018,0.00020573847,0.00002369351,0.000023767792,0.000008409903,0.00007242416,0.000010106056,0.0004972709],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9991565,0.00008346517,0.00029689312,0.00025617375,0.00006080225,0.00014619512],"domain_scores_gemma":[0.9995846,0.00001035282,0.00014344057,0.0002006661,0.00004412537,0.000016795819],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015799244,0.000114073875,0.00023135294,0.00009253814,0.000045883266,0.0000045219485,0.0001259863,0.00014663022,0.000015936468],"category_scores_gemma":[0.0000058605283,0.00009119186,0.000062236344,0.00014480817,0.00022464471,0.000002014507,0.00014508459,0.00006744533,2.4470648e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000029110612,0.000030424302,0.23151292,0.000018546614,0.000012891328,0.0000058720443,0.0001546273,0.0000482463,0.7680627,0.000011785666,0.00004438013,0.00006849914],"study_design_scores_gemma":[0.00034423106,0.000050592724,0.42157906,0.0000026115288,0.000053434673,0.0000058366186,0.00001720235,0.00000763094,0.57776815,0.00003990767,0.00007192154,0.00005941246],"about_ca_topic_score_codex":0.00017295995,"about_ca_topic_score_gemma":0.000099855104,"teacher_disagreement_score":0.19029453,"about_ca_system_score_codex":0.0000063276266,"about_ca_system_score_gemma":0.000020263698,"threshold_uncertainty_score":0.37186962},"labels":[],"label_agreement":null},{"id":"W1964213225","doi":"10.1053/hupa.2001.23518","title":"Primary and secondary prostatic adenocarcinoma of the urinary bladder","year":2001,"lang":"en","type":"article","venue":"Human Pathology","topic":"Urinary and Genital Oncology Studies","field":"Medicine","cited_by":10,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ottawa Hospital; University of Ottawa","funders":"","keywords":"Medicine; Urology; Prostate; Urinary bladder; Carcinoma; Prostatectomy; Adenocarcinoma; Neck of urinary bladder; Urinary system; Prostate biopsy; Internal medicine; Cancer","score_opus":0.022834322226299195,"score_gpt":0.27352559759517525,"score_spread":0.25069127536887603,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1964213225","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9682424,0.0037366054,0.0000022424588,0.0012236375,0.000083384446,0.0002745347,0.0000045281495,0.000018101022,0.026414543],"genre_scores_gemma":[0.9925621,0.000068212576,0.00013440043,0.0012850511,0.0000635767,0.000020932634,0.0000059888284,0.000009794497,0.0058499547],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9993164,0.00008031834,0.00018830808,0.00018328677,0.00006712479,0.0001645605],"domain_scores_gemma":[0.99957997,0.00005016779,0.000069904454,0.0002298449,0.00003332362,0.000036817855],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00010456326,0.00010045056,0.00027233854,0.00004936804,0.00014226101,0.0000014973107,0.00006183641,0.00008145506,0.00013341331],"category_scores_gemma":[0.000021095015,0.00006759566,0.000052514486,0.0000706214,0.00065669615,0.000032103282,0.00016691079,0.00020368851,0.000009028314],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00027321998,0.0005414664,0.97581285,0.0002188734,0.000116122195,0.0025659262,0.0024243959,1.13847655e-7,0.012642064,0.001078477,0.0023137166,0.0020127897],"study_design_scores_gemma":[0.0010648564,0.0019549495,0.9856794,0.000017107672,0.00012198251,0.0073699616,0.00025953373,6.5811207e-7,0.0002021115,0.0011258344,0.0021405236,0.00006306989],"about_ca_topic_score_codex":0.0000019995823,"about_ca_topic_score_gemma":0.0000053056506,"teacher_disagreement_score":0.024319666,"about_ca_system_score_codex":0.000014757548,"about_ca_system_score_gemma":0.000045903864,"threshold_uncertainty_score":0.27564713},"labels":[],"label_agreement":null},{"id":"W1964535856","doi":"10.1016/j.humpath.2011.11.015","title":"Developments in the assessment of venous invasion in colorectal cancer: implications for future practice and patient outcome","year":2012,"lang":"en","type":"review","venue":"Human Pathology","topic":"Colorectal Cancer Surgical Treatments","field":"Medicine","cited_by":114,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Mount Sinai Hospital; Western University; University of Toronto; London Health Sciences Centre","funders":"","keywords":"Lymphovascular invasion; Medicine; Colorectal cancer; Stain; Cancer; Adjuvant therapy; H&E stain; Pathology; Radiology; Oncology; Internal medicine; Metastasis; Immunohistochemistry; Staining","score_opus":0.1398302657482582,"score_gpt":0.4691426134895647,"score_spread":0.3293123477413065,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1964535856","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.04739948,0.9469993,0.0000019055229,0.00031905438,0.00022822253,0.0038975007,0.0001049989,0.000009599881,0.0010399501],"genre_scores_gemma":[0.11358061,0.8803678,0.000908667,0.0001968109,0.000088213244,0.004589283,0.00022703342,0.000032345,0.000009230393],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9982042,0.00033180264,0.0007149204,0.00034094008,0.0001327248,0.00027544197],"domain_scores_gemma":[0.99869263,0.00049811805,0.00046137822,0.00022081974,0.000072217634,0.000054862536],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00043193763,0.0002474461,0.0012336595,0.00020594032,0.000061197694,0.0000058923933,0.00012191514,0.00027019787,0.00001120494],"category_scores_gemma":[0.00007547384,0.00016124632,0.00012172733,0.00025786465,0.00006984197,0.000044325603,0.000090824746,0.0003711396,0.0000012379921],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00005729668,0.0012062036,0.05309447,0.0034093668,0.000090002,0.000087259126,0.0013678354,1.1005808e-7,0.000006848602,0.0009301064,0.000019984443,0.9397305],"study_design_scores_gemma":[0.0011059694,0.0009942546,0.48059738,0.0011023751,0.00071411947,0.00052412675,0.00017008865,1.3591334e-7,9.75234e-7,0.00003832072,0.51459175,0.00016050682],"about_ca_topic_score_codex":0.000040667845,"about_ca_topic_score_gemma":0.00032168798,"teacher_disagreement_score":0.93957,"about_ca_system_score_codex":0.0005723448,"about_ca_system_score_gemma":0.00031918558,"threshold_uncertainty_score":0.6575434},"labels":[],"label_agreement":null},{"id":"W1966143894","doi":"10.1053/hupa.2002.126190","title":"T-cell blast crisis of chronic myelogenous leukemia manifesting as a large mediastinal tumor","year":2002,"lang":"en","type":"article","venue":"Human Pathology","topic":"Chronic Myeloid Leukemia Treatments","field":"Medicine","cited_by":22,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hospital for Sick Children","funders":"","keywords":"Chronic myelogenous leukemia; Fluorescence in situ hybridization; Medicine; Leukemia; Lymphoma; Bone marrow; CD5; Acute lymphocytic leukemia; Pathology; breakpoint cluster region; Cancer research; Immunology; Biology; Internal medicine; Lymphoblastic Leukemia; Gene","score_opus":0.023424472584120257,"score_gpt":0.2678311827445751,"score_spread":0.24440671016045487,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1966143894","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9643121,0.002081047,0.000049849576,0.00009955477,0.00021704116,0.00042961712,0.00002592771,0.00013272042,0.03265218],"genre_scores_gemma":[0.9951922,0.00007143475,0.0006232091,0.00041555244,0.00044364348,0.000053479056,0.00005382998,0.0000724365,0.0030741736],"study_design_codex":"bench_or_experimental","study_design_gemma":"case_report","domain_scores_codex":[0.9975351,0.00011940525,0.00061890896,0.0005936639,0.00033642445,0.0007964674],"domain_scores_gemma":[0.9985644,0.00010425337,0.00032265738,0.0006777953,0.0001128933,0.0002180032],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00025334727,0.00034045757,0.00069679803,0.00022196042,0.00018183426,0.000008073932,0.00021532626,0.00018919355,0.0061559086],"category_scores_gemma":[0.00013355531,0.00032600525,0.00018206994,0.00018435053,0.00019809356,0.000052454143,0.00015218771,0.0004410935,0.0014856881],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00060301565,0.009155982,0.07128,0.004451586,0.0008697292,0.17571183,0.023025326,0.00013727542,0.64363736,0.004179019,0.05613211,0.010816761],"study_design_scores_gemma":[0.16355422,0.05661953,0.14056851,0.002944578,0.006739092,0.3644322,0.010153592,0.011314603,0.20639716,0.0027390195,0.028823584,0.0057139355],"about_ca_topic_score_codex":0.00009849267,"about_ca_topic_score_gemma":0.00004635628,"teacher_disagreement_score":0.43724018,"about_ca_system_score_codex":0.0015349587,"about_ca_system_score_gemma":0.00037878938,"threshold_uncertainty_score":0.9999192},"labels":[],"label_agreement":null},{"id":"W1966197897","doi":"10.1016/j.humpath.2012.11.026","title":"Relevance of the mammalian target of rapamycin pathway in the prognosis of patients with high-risk non–muscle invasive bladder cancer","year":2013,"lang":"en","type":"article","venue":"Human Pathology","topic":"Bladder and Urothelial Cancer Treatments","field":"Medicine","cited_by":28,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"Canadian Institutes of Health Research","keywords":"Bladder cancer; Cancer research; Clinical significance; Cancer; Medicine; Oncology; Internal medicine; Pathology; Biology","score_opus":0.01168101064072627,"score_gpt":0.2386133467575075,"score_spread":0.22693233611678124,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1966197897","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9974002,0.00019039417,0.0000048112583,0.00026910772,0.00007513441,0.0013854211,0.00015732234,0.0000053553354,0.00051224517],"genre_scores_gemma":[0.99888384,0.00004403371,0.00023267789,0.00029775468,0.000032612792,0.0003461203,0.000019315708,0.000022334583,0.00012128456],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9986972,0.0001913226,0.0003888524,0.00023557588,0.00026735803,0.00021968115],"domain_scores_gemma":[0.9987808,0.00008297371,0.00039718705,0.0004729392,0.000233377,0.000032712698],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013152417,0.00016117789,0.0004188617,0.00007369054,0.000049430822,0.0000025910413,0.00021816477,0.00009226023,0.0003245546],"category_scores_gemma":[0.00005068469,0.00008206449,0.00008174248,0.00023215378,0.00035898853,0.00005337905,0.000046569017,0.00018742145,0.00000401569],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011506185,0.0006528022,0.9872495,0.000119946206,0.00007614038,0.000008672798,0.0035961154,0.000011525556,0.0061717955,0.000073971656,0.00037300665,0.001551445],"study_design_scores_gemma":[0.0029924181,0.0012458022,0.9536365,0.00013168553,0.00010544368,0.0000022207983,0.00029965167,9.2821915e-7,0.040987253,0.00043523294,0.000088330125,0.00007450557],"about_ca_topic_score_codex":0.002020854,"about_ca_topic_score_gemma":0.00093166134,"teacher_disagreement_score":0.03481546,"about_ca_system_score_codex":0.000031552554,"about_ca_system_score_gemma":0.00012516402,"threshold_uncertainty_score":0.3553645},"labels":[],"label_agreement":null},{"id":"W1966282619","doi":"10.1016/j.humpath.2009.10.025","title":"A comparison of the fibrotic potential of nonalcoholic fatty liver disease and chronic hepatitis C","year":2010,"lang":"en","type":"article","venue":"Human Pathology","topic":"Liver Disease Diagnosis and Treatment","field":"Medicine","cited_by":17,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"AGE-WELL","keywords":"Nonalcoholic fatty liver disease; Fibrosis; Medicine; Cirrhosis; Internal medicine; Chronic liver disease; Gastroenterology; Steatosis; Fatty liver; Liver disease; Hepatitis C virus; Hepatitis C; Hepatitis; Pathology; Disease; Virus; Immunology","score_opus":0.019585861513435866,"score_gpt":0.3042193051711767,"score_spread":0.2846334436577408,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1966282619","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9982416,0.000986912,0.0000055387027,0.00018386784,0.00009278734,0.00032356245,0.000047425132,0.000007727558,0.00011059399],"genre_scores_gemma":[0.99965596,0.00006326931,0.000055138626,0.0000584497,0.00007164042,0.000025975829,0.000022157476,0.000008511914,0.000038920964],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9993821,0.000044691995,0.00018408406,0.00015733666,0.00011644875,0.000115366376],"domain_scores_gemma":[0.99942654,0.000025818486,0.00010523921,0.0002947389,0.000050457355,0.00009719756],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000036594865,0.00008760861,0.00025709366,0.00003839793,0.000057921818,0.0000028488826,0.00006278428,0.000049970844,0.00030028544],"category_scores_gemma":[0.000020381925,0.000059147005,0.00010714854,0.00003825152,0.00033969586,0.000018254936,0.00007282418,0.0001070189,0.0000062045624],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00003668675,0.00063762674,0.95889926,0.00017556998,0.000057939604,0.000097054675,0.00021600057,0.0000020380426,0.038051352,0.0010512976,0.00014308139,0.00063210714],"study_design_scores_gemma":[0.0010306118,0.00030995943,0.9912507,0.000058251706,0.00047448455,0.000028317138,0.0000068414192,0.000111071706,0.0064702528,0.00017667294,0.000035744077,0.00004708509],"about_ca_topic_score_codex":0.000099418496,"about_ca_topic_score_gemma":0.00019299198,"teacher_disagreement_score":0.03235146,"about_ca_system_score_codex":0.000014385533,"about_ca_system_score_gemma":0.000060797072,"threshold_uncertainty_score":0.3287915},"labels":[],"label_agreement":null},{"id":"W1966858061","doi":"10.1016/j.humpath.2012.04.020","title":"Prognostic factors in T1 bladder urothelial carcinoma: the value of recording millimetric depth of invasion, diameter of invasive carcinoma, and muscularis mucosa invasion","year":2012,"lang":"en","type":"article","venue":"Human Pathology","topic":"Bladder and Urothelial Cancer Treatments","field":"Medicine","cited_by":82,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University Health Centre; McGill University","funders":"","keywords":"Lymphovascular invasion; Concomitant; Muscularis mucosae; Medicine; Pathology; Carcinoma in situ; Carcinoma; Urology; Internal medicine; Metastasis; Cancer","score_opus":0.03896808478487069,"score_gpt":0.2793575192847287,"score_spread":0.240389434499858,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1966858061","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9962497,0.0021667466,0.00004816084,0.0000388496,0.00016779668,0.0009235481,0.000033735738,0.000008943657,0.00036256216],"genre_scores_gemma":[0.9992832,0.000101776335,0.0003270146,0.00007795813,0.00007483001,0.000044776123,0.000028424023,0.000035589404,0.000026432876],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99812245,0.0003424296,0.0006185616,0.00030727414,0.00025068835,0.0003586037],"domain_scores_gemma":[0.9985531,0.0004684933,0.0003171061,0.00042670895,0.00012394636,0.00011067471],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00043191205,0.00024418437,0.0007104587,0.00050628884,0.00006301827,0.0000033801527,0.00013599904,0.00019269779,0.00007297022],"category_scores_gemma":[0.00046859318,0.00016392078,0.00015560728,0.00042037378,0.00036398825,0.000088881534,0.00013165484,0.00022896887,0.0000020740936],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000099337914,0.00035647672,0.9349151,0.0002350449,0.00007083983,0.000029911556,0.0047404645,8.0154405e-7,0.058721993,0.00012395495,0.000028546116,0.0006775216],"study_design_scores_gemma":[0.002249331,0.0009951722,0.8902206,0.000096035124,0.00036882507,0.00006850075,0.00069506094,0.0000033420718,0.10498689,0.00019162186,0.000009338424,0.00011531599],"about_ca_topic_score_codex":0.0016476966,"about_ca_topic_score_gemma":0.00026721548,"teacher_disagreement_score":0.046264898,"about_ca_system_score_codex":0.000056214347,"about_ca_system_score_gemma":0.00012611668,"threshold_uncertainty_score":0.6684496},"labels":[],"label_agreement":null},{"id":"W1967978119","doi":"10.1016/j.humpath.2012.08.018","title":"Abernethy malformation type II with nephrotic syndrome and other multisystemic presentation: an illustrative case for understanding pathogenesis of extrahepatic complication of congenital portosystemic shunt","year":2012,"lang":"en","type":"article","venue":"Human Pathology","topic":"Liver Disease and Transplantation","field":"Medicine","cited_by":20,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Medicine; Nephrotic syndrome; Portal hypertension; Portosystemic shunt; Inferior vena cava; Complication; Population; Pathology; Internal medicine; Cirrhosis","score_opus":0.08416912297439517,"score_gpt":0.31547423387447193,"score_spread":0.23130511090007677,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1967978119","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9904381,0.00019234087,0.008074657,0.0000073403453,0.00003608465,0.0010391466,0.000107020795,0.000016337555,0.00008897728],"genre_scores_gemma":[0.99890375,0.000005497601,0.00074866036,0.00001629574,0.000024930521,0.00005753918,0.00021432398,0.00001564357,0.000013340168],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99924695,0.00007964917,0.0003205127,0.00013190987,0.000095058436,0.0001258893],"domain_scores_gemma":[0.99938095,0.00005292008,0.00024480873,0.00013434468,0.00011533037,0.000071647184],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00016064322,0.00010082032,0.00024263613,0.000104221355,0.00008636724,0.0000033851666,0.000024427962,0.00006952925,0.000023985538],"category_scores_gemma":[0.0000035048702,0.00008594959,0.000026308984,0.0000710043,0.00010540577,0.00019895962,0.0000058564356,0.00003506,8.3241144e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00153567,0.0006901898,0.6812893,0.006069347,0.00063551107,0.0004541232,0.046689242,0.000048618323,0.24293022,0.019441376,0.0000069930647,0.0002093827],"study_design_scores_gemma":[0.008520593,0.0058585387,0.9054285,0.0007307168,0.004035519,0.045042064,0.021248793,0.0028333445,0.00534655,0.000522523,0.0000034581733,0.00042937507],"about_ca_topic_score_codex":0.000047820497,"about_ca_topic_score_gemma":0.000058546364,"teacher_disagreement_score":0.23758367,"about_ca_system_score_codex":0.000040830266,"about_ca_system_score_gemma":0.000027098878,"threshold_uncertainty_score":0.35049227},"labels":[],"label_agreement":null},{"id":"W1970859196","doi":"10.1053/hupa.2000.16532","title":"Primary primitive neuroectodermal tumor of the cauda equina","year":2000,"lang":"en","type":"article","venue":"Human Pathology","topic":"Sarcoma Diagnosis and Treatment","field":"Medicine","cited_by":57,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ottawa Hospital; University of Ottawa","funders":"","keywords":"Cauda equina; Pathology; Histogenesis; CD99; Synaptophysin; Primitive neuroectodermal tumor; Glial fibrillary acidic protein; Spinal cord; Biology; Rhabdomyosarcoma; Central nervous system; Ependymoma; Sarcoma; Medicine; Immunohistochemistry; Vimentin; Neuroscience","score_opus":0.020216192726944457,"score_gpt":0.2695946783291237,"score_spread":0.24937848560217923,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1970859196","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9699672,0.00038564927,5.8424735e-7,0.0005535719,0.000059520604,0.00028237255,0.000009834879,0.000023521055,0.028717766],"genre_scores_gemma":[0.9964937,0.000023264602,0.000060345883,0.002366071,0.00006088045,0.000038771905,0.000012558514,0.000014893317,0.0009295151],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9992206,0.00008911122,0.00019116233,0.0001950036,0.00011688009,0.00018724229],"domain_scores_gemma":[0.99947745,0.00004920386,0.00005918711,0.00034228893,0.00002986892,0.000042016272],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.000054525157,0.00010568543,0.0002551118,0.000033553584,0.00007468881,0.0000027063402,0.000082868,0.000038890754,0.00094097824],"category_scores_gemma":[0.000014077715,0.00006783394,0.000118671094,0.000064637745,0.00018235126,0.000017996581,0.000042202595,0.000120183126,0.000059414397],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00030147377,0.0031840694,0.8614229,0.00015442137,0.00014603684,0.0070616812,0.0016385082,0.00000803162,0.08061153,0.0036322356,0.0042928755,0.03754626],"study_design_scores_gemma":[0.0012018303,0.00034864477,0.98678243,0.000032154214,0.000104072315,0.0010162283,0.00001663156,0.0000015477599,0.008531623,0.00014758349,0.0017619571,0.000055296874],"about_ca_topic_score_codex":0.000015850495,"about_ca_topic_score_gemma":0.000008298967,"teacher_disagreement_score":0.12535955,"about_ca_system_score_codex":0.00003583657,"about_ca_system_score_gemma":0.000042889555,"threshold_uncertainty_score":0.9999723},"labels":[],"label_agreement":null},{"id":"W1972587384","doi":"10.1016/j.humpath.2011.06.005","title":"The spectrum of Merkel cell polyomavirus expression in Merkel cell carcinoma, in a variety of cutaneous neoplasms, and in neuroendocrine carcinomas from different anatomical sites","year":2011,"lang":"en","type":"article","venue":"Human Pathology","topic":"Polyomavirus and related diseases","field":"Medicine","cited_by":77,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Capital District Health Authority; Dalhousie University","funders":"","keywords":"Merkel cell carcinoma; Merkel cell polyomavirus; Merkel cell; Pathology; Immunohistochemistry; Biology; Neuroendocrine differentiation; Carcinoma; Cancer research; Cancer; Medicine","score_opus":0.01795530596379318,"score_gpt":0.2353511887866912,"score_spread":0.217395882822898,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1972587384","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99320006,0.0054756077,0.0000016256851,0.00004690685,0.00007353466,0.0003350078,0.00005316503,0.000012179768,0.0008019197],"genre_scores_gemma":[0.9993729,0.00037429555,0.0000512858,0.00004574787,0.000019214613,0.000015635012,0.000024779702,0.000027783268,0.00006836506],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9980477,0.00026356336,0.00067902054,0.0004255033,0.0001568485,0.0004273464],"domain_scores_gemma":[0.99900335,0.00021123327,0.00020758594,0.00042682883,0.000015920758,0.00013506197],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00007642195,0.00025169388,0.00066783885,0.00028429963,0.000045750116,0.000004189391,0.00017149094,0.0001398892,0.00009068269],"category_scores_gemma":[0.000032589982,0.00017578325,0.00009338624,0.00014312241,0.00035146863,0.00003239198,0.00017978324,0.00045722377,0.0000023809073],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0010014077,0.00090289186,0.700645,0.00006896226,0.000006007372,0.0034046976,0.00129177,0.0000024241704,0.29249135,0.000065757995,0.000023487128,0.00009623597],"study_design_scores_gemma":[0.002997711,0.0004373147,0.7996844,0.000055998014,0.00006271027,0.00014593707,0.0002738935,0.0001906872,0.19533293,0.0006809608,0.000009750345,0.00012772524],"about_ca_topic_score_codex":0.0028328784,"about_ca_topic_score_gemma":0.0020172694,"teacher_disagreement_score":0.09903937,"about_ca_system_score_codex":0.000043257354,"about_ca_system_score_gemma":0.000053906577,"threshold_uncertainty_score":0.7168233},"labels":[],"label_agreement":null},{"id":"W1973978070","doi":"10.1053/hupa.2001.21133","title":"Hepatocyte growth factor is predominantly expressed by the carcinoma cells in non–small-cell lung cancer","year":2001,"lang":"en","type":"article","venue":"Human Pathology","topic":"Liver physiology and pathology","field":"Medicine","cited_by":50,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Princess Margaret Cancer Centre; University Health Network; University of Toronto; Ontario Institute for Cancer Research","funders":"","keywords":"Hepatocyte growth factor; Paracrine signalling; Biology; Autocrine signalling; Stromal cell; Angiogenesis; Cancer research; Pathology; Lung cancer; In situ hybridization; C-Met; Metastasis; Cancer; Messenger RNA; Cell culture; Medicine; Gene; Receptor","score_opus":0.021122141521848402,"score_gpt":0.2709536389547402,"score_spread":0.24983149743289176,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1973978070","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9941331,0.0012200674,0.000052681597,0.0005799505,0.00031321618,0.00077144784,0.00009791471,0.00003958077,0.0027920245],"genre_scores_gemma":[0.99192953,0.0003377187,0.000050701445,0.0033048461,0.00021183664,0.00023130063,0.000041657444,0.000039056682,0.0038533625],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99801993,0.00030270027,0.00037248188,0.00059275574,0.00010373683,0.00060841715],"domain_scores_gemma":[0.9989865,0.00012306646,0.00014742473,0.00056183647,0.00007639918,0.00010480754],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00017708605,0.00029300456,0.00056074036,0.00012761113,0.00017411882,0.000008091712,0.00030763162,0.0003876772,0.0006352503],"category_scores_gemma":[0.00001307675,0.00021519659,0.00012263976,0.00016194618,0.0003326758,0.000054489316,0.00012592012,0.0005769727,0.00008167422],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00027631997,0.00057954073,0.36959496,0.00010306073,0.000025269243,0.0014735069,0.005382835,8.048007e-7,0.61042076,0.000047143414,0.011955504,0.00014028812],"study_design_scores_gemma":[0.012958536,0.0008872886,0.6916467,0.0000770153,0.00024741792,0.0005145695,0.0003118134,0.0002514904,0.28921255,0.00043265443,0.002926828,0.00053313415],"about_ca_topic_score_codex":0.00049187714,"about_ca_topic_score_gemma":0.0001199007,"teacher_disagreement_score":0.32205173,"about_ca_system_score_codex":0.00007194456,"about_ca_system_score_gemma":0.00008221787,"threshold_uncertainty_score":0.8775462},"labels":[],"label_agreement":null},{"id":"W1974617054","doi":"10.1016/j.humpath.2006.10.017","title":"Cyclin D1 and t(11;14)-positive B-cell neoplasms resembling marginal zone B-cell lymphoma: a morphological variant of mantle cell lymphoma","year":2007,"lang":"en","type":"article","venue":"Human Pathology","topic":"Lymphoma Diagnosis and Treatment","field":"Medicine","cited_by":19,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta; University of Calgary; Calgary Laboratory Services","funders":"","keywords":"Marginal zone; Mantle cell lymphoma; Lymphoma; CD5; Cyclin D1; Pathology; CD43; Immunohistochemistry; Lymph node; Mantle zone; B cell; Large cell; Biology; Medicine; Cell; CD20; Antibody; Cell cycle; Cancer; Internal medicine; Immunology; Adenocarcinoma","score_opus":0.017197094183516805,"score_gpt":0.26989413480432395,"score_spread":0.25269704062080717,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1974617054","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9802981,0.0018247741,0.0005134759,0.00017493695,0.0002475435,0.00062298373,0.000055883793,0.00007341054,0.016188895],"genre_scores_gemma":[0.9928034,0.00027298316,0.003898614,0.0004948349,0.00018029103,0.00004714921,0.00012524665,0.000056186942,0.002121322],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9969314,0.00018902597,0.0007968047,0.00088487956,0.0003674787,0.00083041925],"domain_scores_gemma":[0.9981097,0.0004280173,0.00035857045,0.0005804512,0.000166629,0.00035662053],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00075790717,0.0004622503,0.00095845794,0.00036418354,0.00023368868,0.000026401745,0.00018463742,0.00047533555,0.00018934741],"category_scores_gemma":[0.0000406975,0.00038532258,0.00022854797,0.0002501249,0.00045524255,0.0000730621,0.0002371484,0.0001401964,0.00011776412],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0046155,0.05199255,0.22005366,0.0009689344,0.0003057921,0.19831829,0.0044917148,0.000014212258,0.49220678,0.00463453,0.005845168,0.016552864],"study_design_scores_gemma":[0.061304282,0.005685355,0.62372047,0.00021279816,0.0008445482,0.01138684,0.0009992684,0.00010150582,0.2918889,0.00044320873,0.0026284892,0.00078434806],"about_ca_topic_score_codex":0.00029431525,"about_ca_topic_score_gemma":0.00008914243,"teacher_disagreement_score":0.40366682,"about_ca_system_score_codex":0.00023975097,"about_ca_system_score_gemma":0.00012520756,"threshold_uncertainty_score":0.99985987},"labels":[],"label_agreement":null},{"id":"W1974981503","doi":"10.1016/j.humpath.2012.04.019","title":"Sentinel lymph node metastasis is not predictive of poor outcome in patients with problematic spitzoid melanocytic tumors","year":2012,"lang":"en","type":"article","venue":"Human Pathology","topic":"Cutaneous Melanoma Detection and Management","field":"Medicine","cited_by":68,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Vancouver General Hospital; University of British Columbia","funders":"","keywords":"Medicine; Sentinel lymph node; Spitz nevus; Melanoma; Lymph; Biopsy; Metastasis; Sentinel node; Lymph node; Micrometastasis; Cancer; Pathology; Internal medicine; Nevus; Breast cancer; Cancer research","score_opus":0.023652705958237114,"score_gpt":0.26864788576674326,"score_spread":0.24499517980850613,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1974981503","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99656343,0.000023512,0.00016795035,0.0001735673,0.000100284604,0.0007083277,0.000016799624,0.00004882311,0.0021972929],"genre_scores_gemma":[0.9977988,0.000001448688,0.0005060431,0.00077426375,0.000038294922,0.00006517119,0.000027440707,0.000031437256,0.00075709535],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.998443,0.000093535185,0.0005404501,0.00026245645,0.00028354183,0.00037699836],"domain_scores_gemma":[0.99919385,0.000027139971,0.00024824135,0.00033857138,0.000081590224,0.0001105839],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00027029272,0.00019854035,0.0005693713,0.00035155722,0.000044510467,0.000004970118,0.00008102362,0.00007340262,0.00032322807],"category_scores_gemma":[0.000046553265,0.00015485368,0.0000823792,0.00018476366,0.00010694433,0.00006636446,0.00007660887,0.00013743271,0.00006448839],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00036066596,0.0008060842,0.99538136,0.00044507388,0.00011168965,0.000115392344,0.001125035,0.0000098257615,0.001108193,0.00022302504,0.00007961807,0.00023402575],"study_design_scores_gemma":[0.0041722897,0.0003940368,0.99325114,0.00009949576,0.0003000609,0.00015933496,0.00024285793,0.000048931364,0.0010739118,0.00004264514,0.000065737775,0.00014952508],"about_ca_topic_score_codex":0.000023717352,"about_ca_topic_score_gemma":0.000003466472,"teacher_disagreement_score":0.0038116237,"about_ca_system_score_codex":0.00012438015,"about_ca_system_score_gemma":0.000020705802,"threshold_uncertainty_score":0.631475},"labels":[],"label_agreement":null},{"id":"W1976462746","doi":"10.1016/j.humpath.2011.02.028","title":"Fluorescence in situ hybridization for detection of MAML2 rearrangements in oncocytic mucoepidermoid carcinomas: utility as a diagnostic test","year":2011,"lang":"en","type":"article","venue":"Human Pathology","topic":"Salivary Gland Tumors Diagnosis and Treatment","field":"Medicine","cited_by":109,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University Health Network; University of Toronto","funders":"","keywords":"Mucoepidermoid carcinoma; Pathology; Fluorescence in situ hybridization; Biology; Gene rearrangement; Staining; Carcinoma; Salivary gland; Immunostaining; Chromosome; Immunohistochemistry; Medicine; Gene; Genetics","score_opus":0.0540515331683653,"score_gpt":0.30053881360601226,"score_spread":0.24648728043764695,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1976462746","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99764097,0.00020081975,0.000061563995,0.000028653267,0.000075135446,0.0009093394,0.0000104377905,0.000019719244,0.0010533478],"genre_scores_gemma":[0.99922377,0.000056045592,0.0002264684,0.00006629401,0.000028297807,0.000310996,0.000052923984,0.00001505152,0.000020125128],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9988931,0.00008824502,0.00039627252,0.00030983938,0.00008892939,0.00022365656],"domain_scores_gemma":[0.99912804,0.00039890557,0.000113074806,0.0002473248,0.00006076597,0.00005191075],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00026986664,0.00012875692,0.00034022244,0.00021966637,0.000032764776,0.0000023132561,0.000053834807,0.000077189645,0.000059737737],"category_scores_gemma":[0.0010709402,0.00011872209,0.000057354056,0.00014788461,0.000073684205,0.000045567398,0.000024342502,0.00008892668,0.000012192411],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014043029,0.0012908644,0.9816388,0.00011994086,0.000008849061,0.0006590377,0.0009581991,3.1139155e-7,0.013246545,0.00011597005,0.0000123876525,0.0018086481],"study_design_scores_gemma":[0.0031250794,0.0014140198,0.94240516,0.00013481555,0.00006125797,0.00009936388,0.000096973345,0.000037072085,0.051509954,0.0010282374,0.000007776643,0.000080267375],"about_ca_topic_score_codex":0.00062935584,"about_ca_topic_score_gemma":0.0013150385,"teacher_disagreement_score":0.039233636,"about_ca_system_score_codex":0.00011195278,"about_ca_system_score_gemma":0.00003975791,"threshold_uncertainty_score":0.48413464},"labels":[],"label_agreement":null},{"id":"W1976744168","doi":"10.1016/s0046-8177(03)00193-x","title":"The dermatopathologic manifestations of hepatitis C infection: a clinical, histological, and molecular assessment of 35 cases","year":2003,"lang":"en","type":"article","venue":"Human Pathology","topic":"Autoimmune Bullous Skin Diseases","field":"Medicine","cited_by":55,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Occupational and Environmental Medical Association of Canada","funders":"","keywords":"Medicine; Pathology; Folliculitis; Skin biopsy; Hepatitis C; Pyoderma gangrenosum; Subacute cutaneous lupus erythematosus; Vasculitis; Livedo reticularis; Biopsy; Immunology; Autoimmune disease; Connective tissue disease; Disease","score_opus":0.04355705196424387,"score_gpt":0.3839792130884229,"score_spread":0.34042216112417906,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1976744168","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9934559,0.0020818699,0.0005308213,0.0001358004,0.000093688344,0.00030357257,0.000008661635,0.00003406448,0.0033556062],"genre_scores_gemma":[0.9968915,0.0009508447,0.0017603054,0.00023410874,0.000008992193,0.00004775753,0.000012261997,0.000011576567,0.0000826263],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9983293,0.00053661177,0.00062134565,0.00022352568,0.00012234869,0.00016689923],"domain_scores_gemma":[0.9986418,0.00042973494,0.00034313137,0.00039414453,0.00013409916,0.000057127258],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00043823005,0.00011921802,0.0004039268,0.000068424975,0.00018303952,0.0000055171604,0.00006210343,0.000115350995,0.00010592644],"category_scores_gemma":[0.00092249154,0.000085954554,0.00012377444,0.00009005385,0.0009999116,0.00002096342,0.000050311493,0.00016321635,0.0000023996524],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000014545103,0.00050814566,0.96347153,0.00008237425,0.000040547948,0.003118355,0.00006983399,0.000004238455,0.0039229374,0.027930105,0.0003962281,0.00044118118],"study_design_scores_gemma":[0.00067603105,0.0010537879,0.98691756,0.000034037363,0.00018678539,0.0070492616,0.000074543874,0.000008305212,0.00037024615,0.0023206074,0.0012296961,0.00007912176],"about_ca_topic_score_codex":0.000036562615,"about_ca_topic_score_gemma":0.00002762775,"teacher_disagreement_score":0.025609497,"about_ca_system_score_codex":0.000026368023,"about_ca_system_score_gemma":0.00012356063,"threshold_uncertainty_score":0.36842158},"labels":[],"label_agreement":null},{"id":"W1977656313","doi":"10.1016/j.humpath.2007.09.021","title":"Membrane-type-1 matrix metalloproteinase, matrix metalloproteinase 2, and tissue inhibitor of matrix proteinase 2 in prostate cancer: identification of patients with poor prognosis by immunohistochemistry","year":2008,"lang":"en","type":"article","venue":"Human Pathology","topic":"Protease and Inhibitor Mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":57,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Centre hospitalier universitaire de Québec; Université Laval","funders":"","keywords":"Stromal cell; Immunohistochemistry; Matrix metalloproteinase; Prostate cancer; MMP2; Hazard ratio; Cancer research; Prostate; Cancer; Medicine; Oncology; Chemistry; Pathology; Internal medicine; Metastasis","score_opus":0.005737236236752796,"score_gpt":0.25548028201131223,"score_spread":0.24974304577455944,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1977656313","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9924893,0.004607303,0.000057683526,0.000039039307,0.000056797944,0.0024015263,0.0003049359,0.000020295933,0.000023112618],"genre_scores_gemma":[0.99606866,0.00026480606,0.0010012545,0.000014510775,0.00004796346,0.0008219154,0.0006099621,0.000059863833,0.0011110518],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9976021,0.00015959189,0.0008513016,0.00070507603,0.0002999963,0.00038191283],"domain_scores_gemma":[0.9983544,0.000007347868,0.0006965032,0.00048948696,0.0003500878,0.00010221475],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00032787997,0.00036604458,0.0005672124,0.000157443,0.00012892316,0.000011746939,0.00025280027,0.0002848301,0.000039206265],"category_scores_gemma":[0.000074027754,0.00034352287,0.00008234476,0.00025218684,0.00041387917,0.000030689127,0.00015785465,0.00019442191,0.000002826766],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0007194506,0.0005148738,0.0031457366,0.00047445396,0.00006445403,0.000049698727,0.00012255245,0.000007392119,0.99458283,0.00005037013,0.000103222614,0.00016497173],"study_design_scores_gemma":[0.0022914622,0.0013932796,0.0010277139,0.00008281513,0.00007587184,0.000042939417,0.000039839164,0.00000493931,0.9942791,0.000046793808,0.0003602058,0.00035506522],"about_ca_topic_score_codex":0.00016223991,"about_ca_topic_score_gemma":0.000016996724,"teacher_disagreement_score":0.004342497,"about_ca_system_score_codex":0.000039801187,"about_ca_system_score_gemma":0.00014021434,"threshold_uncertainty_score":0.99990165},"labels":[],"label_agreement":null},{"id":"W1980406063","doi":"10.1016/j.humpath.2012.03.006","title":"Extraosseous Ewing sarcoma with foci of neuroblastoma-like differentiation associated with EWSR1(Ewing sarcoma breakpoint region 1)/FLI1 translocation without prior chemotherapy","year":2012,"lang":"en","type":"article","venue":"Human Pathology","topic":"Neuroblastoma Research and Treatments","field":"Medicine","cited_by":9,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Centre Hospitalier Universitaire Sainte-Justine","funders":"","keywords":"CD99; Neuroblastoma; Sarcoma; FLI1; Pathology; Chromosomal translocation; Biology; Fluorescence in situ hybridization; Primitive neuroectodermal tumor; Neuroectodermal tumor; Medicine; Immunohistochemistry; Genetics","score_opus":0.030518103152317996,"score_gpt":0.28462909442973433,"score_spread":0.2541109912774163,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1980406063","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9955635,0.00014789199,0.0025142804,0.00023872493,0.000064052314,0.0009740254,0.00000627749,0.00015861278,0.00033264895],"genre_scores_gemma":[0.9985502,0.000027812444,0.00050152565,0.00024847823,0.00009543984,0.00007784447,0.0000967365,0.00010769,0.00029427625],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9974777,0.0003149797,0.0004543009,0.00048825727,0.0005139595,0.00075078045],"domain_scores_gemma":[0.9985737,0.00010573988,0.00035868067,0.00049921416,0.00020522162,0.00025739678],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0002484327,0.00037113298,0.000652162,0.00031404008,0.0002309572,0.000023165761,0.0001343843,0.00017208263,0.000043716478],"category_scores_gemma":[0.000042160485,0.0002813231,0.00011936885,0.0003115398,0.00026683978,0.00024965385,0.000027953685,0.00037467616,0.00000979582],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.004630741,0.0046496056,0.52668035,0.00030443678,0.0007316899,0.0012122828,0.006211036,0.0000109291705,0.42795667,0.0002722012,0.00009658596,0.02724348],"study_design_scores_gemma":[0.011200989,0.004907028,0.93191504,0.00044002754,0.00026032614,0.0021992477,0.00012456995,0.00010823479,0.048440088,0.000057946505,0.000051267274,0.00029522498],"about_ca_topic_score_codex":0.00003248759,"about_ca_topic_score_gemma":0.00012183621,"teacher_disagreement_score":0.4052347,"about_ca_system_score_codex":0.0001595577,"about_ca_system_score_gemma":0.00008684148,"threshold_uncertainty_score":0.9999639},"labels":[],"label_agreement":null},{"id":"W1980473694","doi":"10.1016/j.humpath.2010.04.015","title":"Clinical and biological significance of GSK-3β inactivation in breast cancer—an immunohistochemical study","year":2010,"lang":"en","type":"article","venue":"Human Pathology","topic":"Wnt/β-catenin signaling in development and cancer","field":"Biochemistry, Genetics and Molecular Biology","cited_by":25,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"Immunohistochemistry; Breast cancer; Oncology; Medicine; Clinical significance; Internal medicine; Pathology; Cancer","score_opus":0.02922162775026515,"score_gpt":0.3460051155235797,"score_spread":0.31678348777331455,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1980473694","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9992722,0.00010848629,0.000025136518,0.0000488644,0.00018794267,0.00022202395,0.000010232129,0.000009209125,0.000115885836],"genre_scores_gemma":[0.99921316,0.00006166769,0.00026550886,0.000082250066,0.00018694095,0.00008719651,0.000044801527,0.000012059374,0.000046438694],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99876165,0.00015652436,0.0003958812,0.00044068875,0.000068494155,0.00017676881],"domain_scores_gemma":[0.9994768,0.000019706395,0.00012914985,0.00024805087,0.00007594283,0.00005038487],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005193286,0.00013023247,0.0002463441,0.00004793553,0.000049084563,0.0000060661087,0.00018745908,0.00028809285,0.000069741254],"category_scores_gemma":[0.000044852928,0.000117334304,0.000036278427,0.00006544782,0.0004375926,0.000005074998,0.00010238354,0.00026750664,0.0000010492957],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009906918,0.00021089877,0.4267196,0.0000031179786,0.000008626393,0.000004619339,0.000089683126,6.0107715e-7,0.5716368,0.00005693745,0.000045509783,0.0011245314],"study_design_scores_gemma":[0.0010382831,0.0004978326,0.9519495,0.0000065548797,0.00000875954,0.000026815516,0.00015280647,0.000003556507,0.04570044,0.00021638678,0.00022860224,0.00017048893],"about_ca_topic_score_codex":0.000057130645,"about_ca_topic_score_gemma":0.00013373359,"teacher_disagreement_score":0.52593637,"about_ca_system_score_codex":0.00000942076,"about_ca_system_score_gemma":0.0000629385,"threshold_uncertainty_score":0.47847542},"labels":[],"label_agreement":null},{"id":"W1981889104","doi":"10.1016/j.humpath.2007.01.014","title":"Pathological effects of drugs on the gastrointestinal tract: a review","year":2007,"lang":"en","type":"review","venue":"Human Pathology","topic":"Microscopic Colitis","field":"Medicine","cited_by":228,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"London Health Sciences Centre; Western University","funders":"","keywords":"Microscopic colitis; Medicine; Gastrointestinal tract; Pathological; Drug; Colitis; Pathology; Pathophysiology; Enterocolitis; Necrotizing enterocolitis; Internal medicine; Gastroenterology; Disease; Inflammatory bowel disease; Pharmacology","score_opus":0.08720060260269101,"score_gpt":0.4089838539482239,"score_spread":0.3217832513455329,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1981889104","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00046986892,0.9906036,0.000021006439,0.00013098198,0.00013657604,0.002761386,0.000018046805,0.00005463663,0.005803886],"genre_scores_gemma":[0.0000617518,0.9963752,0.0002789914,0.0017861243,0.0002499632,0.00022940489,0.000078684105,0.00005545544,0.00088445045],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9969188,0.0006830843,0.0010424732,0.0005801714,0.00028069346,0.00049477373],"domain_scores_gemma":[0.996619,0.001496523,0.0006247995,0.0010451947,0.00009037589,0.00012411966],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0011237278,0.0005004562,0.0030736018,0.00018559965,0.000074719675,0.0000052557275,0.00034838085,0.00031350533,0.00080360606],"category_scores_gemma":[0.0012308545,0.00028569528,0.00081054406,0.00023336751,0.0004425827,0.000009293013,0.00012955975,0.0013093,0.00024949582],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000014448181,0.0005871178,0.000056974568,0.25301632,0.000027629178,0.0113867065,0.00008801723,1.6122464e-9,0.000060841834,0.0041139787,0.007064848,0.7235831],"study_design_scores_gemma":[0.00036214566,0.0017833711,0.0008706784,0.25225464,0.0014042645,0.01997957,0.0000039000975,1.9456861e-8,0.000006800481,0.000084602216,0.72303873,0.00021129637],"about_ca_topic_score_codex":0.000002510398,"about_ca_topic_score_gemma":0.000001211634,"teacher_disagreement_score":0.7233718,"about_ca_system_score_codex":0.000108726854,"about_ca_system_score_gemma":0.00016643603,"threshold_uncertainty_score":0.9999595},"labels":[],"label_agreement":null},{"id":"W1983483919","doi":"10.1016/s0046-8177(00)80243-9","title":"Recurrent anomalies of 6q25 in chondromyxoid fibroma","year":2000,"lang":"en","type":"review","venue":"Human Pathology","topic":"Bone Tumor Diagnosis and Treatments","field":"Medicine","cited_by":76,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Chondromyxoid fibroma; Chondroma; Cytogenetics; Chromosomal inversion; Biology; Karyotype; Pathology; Anatomy; Chromosome; Medicine; Genetics","score_opus":0.07702953607117008,"score_gpt":0.3892366974869273,"score_spread":0.3122071614157572,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1983483919","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.015871968,0.97788566,5.1229264e-8,0.000013266908,0.00012734451,0.0007386477,0.0000696246,0.00002587279,0.0052675363],"genre_scores_gemma":[0.0015284251,0.9961391,0.0000824188,0.000017419303,0.00007267158,0.00021188548,0.0004622479,0.000051224906,0.001434598],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9980922,0.00018873892,0.0008234656,0.0004654532,0.00012806516,0.0003021152],"domain_scores_gemma":[0.9989995,0.000071326984,0.0003031581,0.00052948814,0.00002145379,0.00007507775],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00011064565,0.0003748887,0.0026182113,0.00042529873,0.00002846838,0.0000044837643,0.00012862137,0.00031033985,0.000949804],"category_scores_gemma":[0.000018741566,0.00029257633,0.00043658938,0.00020022334,0.00014677452,0.000021671776,0.000051997074,0.00034618884,0.00018552969],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000019603125,0.0011167222,0.001786891,0.01231478,0.00011693417,0.0038037559,0.00011962182,2.5623438e-8,0.0000016053496,0.0004103123,0.0007328047,0.97957695],"study_design_scores_gemma":[0.0012500276,0.001284266,0.008633992,0.019930035,0.0010101503,0.001807081,0.0000064721357,7.475223e-8,0.0000037906698,0.00012826403,0.96567523,0.00027059703],"about_ca_topic_score_codex":0.00001860099,"about_ca_topic_score_gemma":0.000032896813,"teacher_disagreement_score":0.97930634,"about_ca_system_score_codex":0.000100913334,"about_ca_system_score_gemma":0.000110740395,"threshold_uncertainty_score":0.99996346},"labels":[],"label_agreement":null},{"id":"W1984763467","doi":"10.1016/s0046-8177(03)00286-7","title":"Prominent intrasinusoidal infiltration of the bone marrow by mantle cell lymphoma","year":2003,"lang":"en","type":"article","venue":"Human Pathology","topic":"Lymphoma Diagnosis and Treatment","field":"Medicine","cited_by":18,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"BC Cancer Agency","funders":"","keywords":"Pathology; CD5; Bone marrow; Lymphoma; Mantle cell lymphoma; Immunohistochemistry; CD20; Mantle zone; Cyclin D1; Medicine; Biology; B cell; Antibody; Immunology; Germinal center; Internal medicine; Cancer","score_opus":0.010085250330301408,"score_gpt":0.23676228797793075,"score_spread":0.22667703764762934,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1984763467","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9838248,0.00044781293,0.000008941616,0.00034111188,0.00011829269,0.0003588273,0.000012423396,0.000015985837,0.014871817],"genre_scores_gemma":[0.9978616,0.000022529768,0.00017059591,0.00025711226,0.000028015598,0.000054739117,0.000029920187,0.000012771541,0.0015627178],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9991842,0.000091835806,0.00024037223,0.00018711502,0.00012740117,0.00016907434],"domain_scores_gemma":[0.9994683,0.000022641712,0.00011606112,0.00030500966,0.00003988296,0.000048054942],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000103035985,0.00011570629,0.00022289857,0.000037115205,0.00007176874,0.0000053502595,0.000050841503,0.00009065757,0.0001966541],"category_scores_gemma":[0.000027140064,0.000076331904,0.00008363405,0.000069664886,0.00011244949,0.000022107755,0.00001836969,0.000039891023,0.000028252303],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000074231444,0.004139316,0.22050348,0.00013684508,0.000058549773,0.00034627217,0.0008807667,0.0000010377399,0.733392,0.009570847,0.027537944,0.0033587036],"study_design_scores_gemma":[0.0061239013,0.00087294483,0.2112533,0.000036499925,0.00015436497,0.00058512,0.00008442966,0.0000036322003,0.7681833,0.00056277047,0.01200964,0.00013013356],"about_ca_topic_score_codex":0.000018112627,"about_ca_topic_score_gemma":0.000014993871,"teacher_disagreement_score":0.034791254,"about_ca_system_score_codex":0.00008083349,"about_ca_system_score_gemma":0.00006264799,"threshold_uncertainty_score":0.31127247},"labels":[],"label_agreement":null},{"id":"W1986814276","doi":"10.1016/j.humpath.2003.05.002","title":"Primary villoglandular adenocarcinoma of cloacogenic origin of the vulva","year":2004,"lang":"en","type":"article","venue":"Human Pathology","topic":"Urinary and Genital Oncology Studies","field":"Medicine","cited_by":30,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hôtel-Dieu de Québec; Centre hospitalier universitaire de Québec; Université Laval","funders":"","keywords":"Vulva; Medicine; Pathology; Immunohistochemistry; Lymph node; Staining; Adenocarcinoma; Cancer; Internal medicine","score_opus":0.029518346093203748,"score_gpt":0.2882704096487129,"score_spread":0.25875206355550917,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1986814276","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.990521,0.0021419653,0.000012325938,0.0005513154,0.00016531625,0.00021844656,0.000008919263,0.0000150656415,0.0063656596],"genre_scores_gemma":[0.9985446,0.00003092805,0.00024780826,0.00042929413,0.00007878863,0.000010421263,0.000007688673,0.000009445557,0.0006410561],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99921423,0.00006649673,0.00028088136,0.00016853884,0.000103801016,0.00016603623],"domain_scores_gemma":[0.9994106,0.000030344485,0.00013126302,0.00033375426,0.000063723055,0.00003031522],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013742928,0.00010371675,0.00039579347,0.00006132326,0.00007830656,5.1045504e-7,0.00012510338,0.00012158775,0.00004890916],"category_scores_gemma":[0.000031728927,0.00006880649,0.00013978049,0.00011046649,0.00059680647,0.000018243709,0.00011835219,0.00016978111,0.000010994978],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00031946722,0.0008515955,0.7066724,0.00026131215,0.0002404419,0.00082744914,0.0023202514,0.0000081129,0.2782156,0.009510845,0.0003399229,0.00043263356],"study_design_scores_gemma":[0.0022588626,0.001852595,0.9774697,0.000031778705,0.00021485538,0.00094075146,0.00010987115,1.291669e-7,0.013436908,0.0026335756,0.0009819083,0.00006910617],"about_ca_topic_score_codex":0.000015436974,"about_ca_topic_score_gemma":0.000020941878,"teacher_disagreement_score":0.27079728,"about_ca_system_score_codex":0.000038344315,"about_ca_system_score_gemma":0.00008402839,"threshold_uncertainty_score":0.28058472},"labels":[],"label_agreement":null},{"id":"W1989442246","doi":"10.1016/j.humpath.2008.04.019","title":"A new molecular variant of desmoplastic small round cell tumor: significance of WT1 immunostaining in this entity","year":2008,"lang":"en","type":"article","venue":"Human Pathology","topic":"Sarcoma Diagnosis and Treatment","field":"Medicine","cited_by":72,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Hospital for Sick Children","funders":"","keywords":"Desmoplastic small-round-cell tumor; Biology; Immunostaining; Immunohistochemistry; Pathology; Exon; Reverse transcription polymerase chain reaction; Messenger RNA; Gene; Medicine; Genetics","score_opus":0.029989800347672294,"score_gpt":0.26078902577786656,"score_spread":0.23079922543019427,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1989442246","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99487776,0.0016294679,0.00055619376,0.00003146154,0.000048461945,0.00026760536,0.0000053325743,0.000012498466,0.0025712],"genre_scores_gemma":[0.9968039,0.000056439963,0.002824867,0.000090703325,0.000014963692,0.000024585812,0.00001235603,0.0000162648,0.00015592149],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9989485,0.0000941493,0.00038536658,0.00024055524,0.00011376462,0.00021766115],"domain_scores_gemma":[0.9992856,0.00011216624,0.0001786489,0.00030951193,0.000054226715,0.00005988209],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013112194,0.00013171826,0.00046255477,0.0001549764,0.00003490744,0.0000019895142,0.00008528767,0.000069009875,0.00024892928],"category_scores_gemma":[0.000060393693,0.00012347172,0.00009544337,0.00013223419,0.000121885445,0.000020481591,0.000045097455,0.00013095148,0.000012043311],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00017425549,0.0019640718,0.67011595,0.00017042416,0.00007178472,0.02263537,0.0030952324,0.000040152252,0.2980306,0.0031492393,0.00014329432,0.000409609],"study_design_scores_gemma":[0.0047628535,0.0013448265,0.8867067,0.00014368388,0.0001754788,0.0010576281,0.00018424312,0.000022892964,0.10470136,0.0006115867,0.00011898768,0.00016976014],"about_ca_topic_score_codex":0.0006138752,"about_ca_topic_score_gemma":0.00007537019,"teacher_disagreement_score":0.21659075,"about_ca_system_score_codex":0.00006186618,"about_ca_system_score_gemma":0.00015617158,"threshold_uncertainty_score":0.503503},"labels":[],"label_agreement":null},{"id":"W1990459924","doi":"10.1016/j.humpath.2013.09.003","title":"Activating transcription factor 2 in mesenchymal tumors","year":2013,"lang":"en","type":"article","venue":"Human Pathology","topic":"Sarcoma Diagnosis and Treatment","field":"Medicine","cited_by":16,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"Cancer research; Mesenchymal stem cell; Transcription factor; Biology; Synovial sarcoma; Carcinogenesis; Pathology; Sarcoma; Cell biology; Medicine; Cancer; Genetics","score_opus":0.043313482257638404,"score_gpt":0.3018989468830291,"score_spread":0.25858546462539067,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1990459924","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9965646,0.00014076088,0.000008335181,0.0005252825,0.00004693665,0.00031643838,0.00000165485,0.0000360704,0.0023599032],"genre_scores_gemma":[0.99909365,0.000006542017,0.00025087307,0.0002763428,0.000053954143,0.00013709282,0.000017244596,0.0000120787745,0.0001521924],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9993215,0.000046529763,0.00017717542,0.00018472614,0.00007278345,0.00019723778],"domain_scores_gemma":[0.9997249,0.00003026526,0.000035378212,0.00013539677,0.000022131497,0.000051891664],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.000042588046,0.000093932795,0.00020612047,0.00011081129,0.000039537004,0.0000075230732,0.000030776566,0.000066910725,0.0011602805],"category_scores_gemma":[0.000021761485,0.00007621591,0.000051965075,0.000062580846,0.000035999223,0.00006144162,0.000009251649,0.00012142592,0.00014235156],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000010252345,0.000475002,0.75734264,0.000020496971,0.000012737657,0.0005799874,0.0013619044,5.9856507e-7,0.2215578,0.0007547167,0.00016803572,0.017715842],"study_design_scores_gemma":[0.0011372956,0.00019525448,0.9903837,0.000034715827,0.000008118065,0.00012960298,0.00019320738,0.0000119779725,0.0073073753,0.00040320616,0.00013126031,0.00006432876],"about_ca_topic_score_codex":0.00012828785,"about_ca_topic_score_gemma":0.00003838355,"teacher_disagreement_score":0.23304103,"about_ca_system_score_codex":0.000058040387,"about_ca_system_score_gemma":0.000011935493,"threshold_uncertainty_score":0.9997528},"labels":[],"label_agreement":null},{"id":"W1991034394","doi":"10.1053/hupa.2001.21137","title":"Tenascin differentiates dermatofibroma from dermatofibrosarcoma protuberans: Comparison with CD34 and factor XIIIa","year":2001,"lang":"en","type":"article","venue":"Human Pathology","topic":"Sarcoma Diagnosis and Treatment","field":"Medicine","cited_by":59,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Women's College Hospital; University of Toronto; Sunnybrook Health Science Centre","funders":"","keywords":"Dermatofibrosarcoma protuberans; Factor XIIIa; CD34; Pathology; Tenascin; Immunohistochemistry; Lesion; Medicine; Extracellular matrix; Biology; Stem cell; Cell biology","score_opus":0.02895778823895099,"score_gpt":0.28833211195899555,"score_spread":0.25937432372004454,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1991034394","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99541074,0.0024892932,0.000093530594,0.0006431704,0.00004231633,0.0007225846,0.00004259405,0.00014513951,0.00041063363],"genre_scores_gemma":[0.9978628,0.0000840931,0.0010578845,0.00038923183,0.00007600805,0.00017145927,0.00022673726,0.00004554034,0.00008625359],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9984917,0.00009762376,0.00034293998,0.0004968475,0.00016780668,0.00040305537],"domain_scores_gemma":[0.999136,0.000101215,0.000109467896,0.00040404205,0.000051029074,0.00019827574],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000029588906,0.00032028576,0.0006687014,0.00012486374,0.0001974604,0.000046189976,0.00008367884,0.00014641197,0.00036526972],"category_scores_gemma":[0.000008338186,0.00021977614,0.000077425364,0.000094573086,0.00020603083,0.00008231099,0.000062638166,0.00017668364,0.00006437714],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015798,0.0007566919,0.98054165,0.000043739292,0.00013896062,0.0020056712,0.0008300727,1.6923862e-7,0.012736269,0.00018941505,0.0003263151,0.0022730958],"study_design_scores_gemma":[0.004554552,0.00058531977,0.98227423,0.0001490529,0.00020706211,0.0021171735,0.00017481603,0.000040265517,0.008197161,0.00045930143,0.0010007112,0.00024033243],"about_ca_topic_score_codex":0.00011478365,"about_ca_topic_score_gemma":0.00019053106,"teacher_disagreement_score":0.004539108,"about_ca_system_score_codex":0.000037704365,"about_ca_system_score_gemma":0.000021417925,"threshold_uncertainty_score":0.89622104},"labels":[],"label_agreement":null},{"id":"W1991897088","doi":"10.1016/j.humpath.2012.01.020","title":"International study group on rectal cancer regression grading: interobserver variability with commonly used regression grading systems","year":2012,"lang":"en","type":"article","venue":"Human Pathology","topic":"Colorectal Cancer Surgical Treatments","field":"Medicine","cited_by":99,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University Health Network; University of Toronto; London Health Sciences Centre; Sunnybrook Health Science Centre; Western University","funders":"","keywords":"Grading (engineering); Concordance; Medicine; Colorectal cancer; Regression; Regression analysis; Radiology; Cancer; Internal medicine; Statistics; Mathematics","score_opus":0.0835253685517814,"score_gpt":0.37348365856217486,"score_spread":0.28995829001039347,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1991897088","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99258417,0.00015907538,0.000038172824,0.00016374078,0.0018657945,0.0010717979,0.000014890064,0.0001457815,0.0039566034],"genre_scores_gemma":[0.9983314,0.000012142308,0.00009633557,0.00008283333,0.00049058395,0.00036606507,0.000074262825,0.00004992122,0.0004964176],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99742234,0.00061373296,0.00042498892,0.00059608865,0.00048673144,0.00045610545],"domain_scores_gemma":[0.99865943,0.00020193866,0.00025832138,0.000537094,0.00010342259,0.00023981437],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00075848954,0.00034524518,0.00064003724,0.0001842054,0.00020022174,0.000029368726,0.00019639662,0.00016953541,0.00031587263],"category_scores_gemma":[0.000085202635,0.00021838407,0.00010659168,0.00018843658,0.00013863193,0.00017997569,0.00015252242,0.0004727172,0.000021639518],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0017041218,0.0023136754,0.9881102,0.00004931691,0.00017912903,0.0004910167,0.0019185297,0.000003581112,0.0031648823,0.00053843757,0.00031130627,0.0012158267],"study_design_scores_gemma":[0.0055864616,0.003989469,0.98619634,0.00086074165,0.00020101285,0.0004031525,0.00047734854,0.00006827498,0.00041570334,0.000051535495,0.0014647741,0.00028521643],"about_ca_topic_score_codex":0.00020159823,"about_ca_topic_score_gemma":0.000115768744,"teacher_disagreement_score":0.0057472945,"about_ca_system_score_codex":0.00080635987,"about_ca_system_score_gemma":0.000026684542,"threshold_uncertainty_score":0.89054435},"labels":[],"label_agreement":null},{"id":"W1993423024","doi":"10.1016/j.humpath.2005.06.016","title":"A novel method for freezing and storing research tissue bank specimens","year":2005,"lang":"en","type":"article","venue":"Human Pathology","topic":"Cancer Genomics and Diagnostics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":33,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Calgary Laboratory Services; University of Calgary","funders":"","keywords":"Capsule; Liquid nitrogen; Materials science; Biomedical engineering; Cryopreservation; Chemistry; Biology; Medicine; Botany","score_opus":0.0738728217194602,"score_gpt":0.40302432854110276,"score_spread":0.32915150682164257,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1993423024","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8997239,0.0025740236,0.09330499,0.0006065242,0.00022279588,0.00044922702,0.00008346783,0.000014738977,0.0030203308],"genre_scores_gemma":[0.86128634,0.00018882738,0.13325432,0.00043834408,0.0024975645,0.00011181708,0.00008312841,0.000049077884,0.0020905635],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.99906564,0.00004479674,0.00014416878,0.0003691799,0.00006142882,0.0003147789],"domain_scores_gemma":[0.99945146,0.00009182511,0.00003611706,0.00026053778,0.000092793685,0.00006725317],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006174193,0.00009667704,0.00013007497,0.00006658894,0.00019310424,0.000023815574,0.00011725388,0.00013368923,0.000018148972],"category_scores_gemma":[0.00016322736,0.00010620307,0.000031541233,0.000036235728,0.00008913667,0.0000020204939,0.00017552823,0.00010683676,0.000005134164],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00002144835,0.000034073037,0.00010723534,0.0000108931445,0.000010323831,0.0000042489173,0.00014881398,0.000038379676,0.98408175,0.0049718074,0.0024477907,0.0081232395],"study_design_scores_gemma":[0.0012040837,0.00066867966,0.0012488499,0.000008994112,0.000017519787,0.00014140666,0.00008192895,0.00012872028,0.41642913,0.0009844112,0.57886225,0.0002240287],"about_ca_topic_score_codex":0.000026789323,"about_ca_topic_score_gemma":0.00028848852,"teacher_disagreement_score":0.57641447,"about_ca_system_score_codex":0.000031306197,"about_ca_system_score_gemma":0.000035798,"threshold_uncertainty_score":0.43308356},"labels":[],"label_agreement":null},{"id":"W1995878539","doi":"10.1016/j.humpath.2008.02.009","title":"Pathology education in a multisite urban/rural distributed curriculum","year":2008,"lang":"en","type":"article","venue":"Human Pathology","topic":"Global Health Workforce Issues","field":"Health Professions","cited_by":23,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"Faculty of Medicine, University of British Columbia","keywords":"Curriculum; Staffing; Medical education; Digital pathology; Quality (philosophy); Medicine; Pathology; Psychology; Pedagogy; Nursing","score_opus":0.035720259277351764,"score_gpt":0.42473417946201386,"score_spread":0.3890139201846621,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1995878539","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98891836,0.0010773663,0.000089270005,0.00053094875,0.001349567,0.0010307855,0.000050673294,0.00020379957,0.0067492025],"genre_scores_gemma":[0.99267757,0.00014988777,0.00054314965,0.0018089649,0.0004577305,0.00039895737,0.00057599816,0.000034410627,0.0033533343],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9960234,0.0013332184,0.00091889774,0.00046489018,0.00015664565,0.0011029124],"domain_scores_gemma":[0.9985593,0.0001675692,0.00032975676,0.0005309293,0.00020717071,0.00020528432],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00046219438,0.00025553402,0.0005347439,0.00025025217,0.0009079186,0.0000028850639,0.00027811268,0.0005581567,0.0007520879],"category_scores_gemma":[0.00023892455,0.00025159665,0.00006825117,0.0003847233,0.00025649677,0.00011488282,0.00016935832,0.0009815607,0.0012030567],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00002402133,0.0003191936,0.94556737,0.0000720724,0.000002588131,0.0004926401,0.004704418,0.000003712825,0.000293099,0.0064733406,0.041419648,0.00062788813],"study_design_scores_gemma":[0.0015816939,0.00019661327,0.9549846,0.0002526508,0.000010559412,0.00035409964,0.004709305,0.00003572448,0.00000932422,0.0017165358,0.03584656,0.00030231234],"about_ca_topic_score_codex":0.0011445611,"about_ca_topic_score_gemma":0.0017417842,"teacher_disagreement_score":0.009417242,"about_ca_system_score_codex":0.00040635435,"about_ca_system_score_gemma":0.00041063616,"threshold_uncertainty_score":0.9999936},"labels":[],"label_agreement":null},{"id":"W1996491757","doi":"10.1016/j.humpath.2009.09.012","title":"If not, why not? Reasons why Canadian postgraduate trainees chose—or did not choose—to become pathologists","year":2009,"lang":"en","type":"article","venue":"Human Pathology","topic":"Innovations in Medical Education","field":"Medicine","cited_by":53,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"BC Children's Hospital; University of British Columbia","funders":"Claude Pepper Older Americans Independence Center, Wake Forest School of Medicine","keywords":"Clinical pathology; Surgical pathology; Medicine; Anatomical pathology; Family medicine; Medical education; Pathology; Psychology","score_opus":0.044872244613371526,"score_gpt":0.34808595744148463,"score_spread":0.3032137128281131,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1996491757","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8626506,0.000031268297,0.000323585,0.13093373,0.0008878703,0.00081962964,0.00008453873,0.00020818524,0.004060601],"genre_scores_gemma":[0.82992166,0.000015775982,0.004106221,0.16222303,0.00078868895,0.000102351456,0.00040715013,0.000049074803,0.0023860636],"study_design_codex":"not_applicable","study_design_gemma":"observational","domain_scores_codex":[0.9968626,0.00016813287,0.00075141864,0.00079000386,0.00042570036,0.0010021415],"domain_scores_gemma":[0.99780977,0.00007453301,0.00017911523,0.0009894486,0.00039690244,0.00055026246],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0009517793,0.00039048897,0.0006709331,0.00097394525,0.00041621548,0.000043846554,0.00040565187,0.00045171464,0.00089442695],"category_scores_gemma":[0.0025477824,0.00034734234,0.00012968581,0.0008124685,0.00033440342,0.00011585038,0.000046224934,0.000824242,0.0003823489],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0010719427,0.0019230403,0.011183033,0.00022697593,0.00014222821,0.010112778,0.023178793,0.000023589815,0.075470455,0.03069266,0.6143665,0.23160806],"study_design_scores_gemma":[0.0017693324,0.0015030875,0.8716258,0.00014247667,0.00011621162,0.0015558943,0.00046460077,0.000037852566,0.00118924,0.000819855,0.12020599,0.000569656],"about_ca_topic_score_codex":0.0033641853,"about_ca_topic_score_gemma":0.009909701,"teacher_disagreement_score":0.86044276,"about_ca_system_score_codex":0.00047678864,"about_ca_system_score_gemma":0.00047061325,"threshold_uncertainty_score":0.99989784},"labels":[],"label_agreement":null},{"id":"W1996608580","doi":"10.1016/j.humpath.2011.07.013","title":"Cyclin kinase subunit 1B nuclear expression predicts an adverse outcome for patients with relapsed/refractory multiple myeloma treated with bortezomib","year":2011,"lang":"en","type":"article","venue":"Human Pathology","topic":"Multiple Myeloma Research and Treatments","field":"Medicine","cited_by":21,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; University Health Network","funders":"Canadian Institutes of Health Research; Leukemia and Lymphoma Society of Canada; Cancer Research Society","keywords":"Bortezomib; Cancer research; Multiple myeloma; Biology; Cyclin D1; Immunohistochemistry; Fluorescence in situ hybridization; Cyclin D; Molecular biology; Medicine; Cell cycle; Internal medicine; Cancer; Immunology; Biochemistry","score_opus":0.05103582742285989,"score_gpt":0.2958866043885326,"score_spread":0.2448507769656727,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1996608580","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9963199,0.000017667131,0.000049223712,0.000011828215,0.000047914138,0.0019894445,0.0001713065,0.00022546503,0.0011672667],"genre_scores_gemma":[0.9932031,0.0000055241844,0.0044066925,0.00011686753,0.000069184214,0.0002546005,0.0011650778,0.00013256309,0.000646357],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9975779,0.00018323498,0.00042666114,0.00072994037,0.00036905226,0.000713221],"domain_scores_gemma":[0.99796015,0.000087414286,0.00022703229,0.0008480767,0.00030770453,0.0005695928],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00016085223,0.00040159433,0.00058268517,0.0002849718,0.00033421227,0.000011556507,0.00019405482,0.00025964502,0.0003958152],"category_scores_gemma":[0.0001411511,0.0002683367,0.00010219295,0.00013020015,0.00033617954,0.00027142363,0.00006895488,0.00033398185,0.000074136246],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.013239834,0.004549505,0.97287846,0.000087239365,0.00012384435,0.0017273105,0.0011303233,6.373445e-7,0.004446264,0.00003397838,0.00013893614,0.0016436713],"study_design_scores_gemma":[0.035534844,0.016203947,0.9451049,0.00012070827,0.000194795,0.00005703311,0.0002386622,0.000068903595,0.0016082675,0.000018410634,0.0005583924,0.00029112445],"about_ca_topic_score_codex":0.00010586214,"about_ca_topic_score_gemma":0.00016466218,"teacher_disagreement_score":0.027773542,"about_ca_system_score_codex":0.000116294315,"about_ca_system_score_gemma":0.000059822523,"threshold_uncertainty_score":0.9999769},"labels":[],"label_agreement":null},{"id":"W1996737831","doi":"10.1016/j.humpath.2009.04.017","title":"Ovarian carcinoma pathology and genetics: recent advances","year":2009,"lang":"en","type":"review","venue":"Human Pathology","topic":"Ovarian cancer diagnosis and treatment","field":"Medicine","cited_by":246,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Vancouver General Hospital; University of British Columbia","funders":"","keywords":"Ovarian carcinoma; Molecular pathology; Pathology; Carcinoma; Anatomical pathology; Medicine; Ovarian cancer; Biology; Internal medicine; Cancer; Gene; Immunohistochemistry; Genetics","score_opus":0.06612446557829361,"score_gpt":0.3670373268290499,"score_spread":0.3009128612507563,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1996737831","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00025418296,0.9933261,0.000008294207,0.00027469653,0.00036300745,0.0011044376,0.00005618797,0.000062843195,0.004550228],"genre_scores_gemma":[0.00015128659,0.9968082,0.00085261575,0.0005420961,0.0005759331,0.00028409468,0.00034364845,0.00007456436,0.00036760722],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9973361,0.00029242787,0.0007042677,0.0010140885,0.00014405376,0.00050909125],"domain_scores_gemma":[0.99849683,0.000079689424,0.00034962775,0.0007764504,0.00007439017,0.0002230055],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00020066995,0.00059034856,0.0025398957,0.00028917714,0.00013767717,0.000021556352,0.0001435073,0.0006143653,0.0003864298],"category_scores_gemma":[0.000027339709,0.00046386875,0.00029245229,0.00015307905,0.00023631702,0.000029775063,0.00009931431,0.00046449638,0.00009475602],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000010156474,0.00021878327,0.00040782278,0.0027105552,0.000087030516,0.008119329,0.000073742915,3.1943017e-8,9.946087e-7,0.0008715249,0.00055534183,0.9869447],"study_design_scores_gemma":[0.0012285622,0.0013909916,0.0033953458,0.0017591879,0.0021617066,0.008396036,0.000009257368,1.5457927e-7,0.0000018161659,0.00051928277,0.9807936,0.00034409095],"about_ca_topic_score_codex":0.0000036698111,"about_ca_topic_score_gemma":0.000022944821,"teacher_disagreement_score":0.9866006,"about_ca_system_score_codex":0.00019482218,"about_ca_system_score_gemma":0.00022243752,"threshold_uncertainty_score":0.9997813},"labels":[],"label_agreement":null},{"id":"W1996896090","doi":"10.1016/j.humpath.2008.03.004","title":"The combination of high cyclin E and Skp2 expression in breast cancer is associated with a poor prognosis and the basal phenotype","year":2008,"lang":"en","type":"article","venue":"Human Pathology","topic":"Cancer-related Molecular Pathways","field":"Medicine","cited_by":44,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Vancouver General Hospital; McGill University; University of British Columbia; BC Cancer Agency","funders":"","keywords":"Breast cancer; Tissue microarray; Cancer; Oncology; Basal (medicine); Internal medicine; Biomarker; Biology; Cancer research; Medicine; Pathology","score_opus":0.012346763474618752,"score_gpt":0.2471013051507469,"score_spread":0.23475454167612816,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1996896090","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99555415,0.0010380686,0.00001394019,0.0027492784,0.0000378826,0.00044353816,0.000017164359,0.000014436144,0.00013152331],"genre_scores_gemma":[0.99890393,0.0004810318,0.00002988933,0.0003803976,0.000018710572,0.00008797768,0.000011408704,0.000015752836,0.00007091931],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.999177,0.0001674728,0.00018638067,0.00018571004,0.00013702235,0.0001464135],"domain_scores_gemma":[0.999507,0.00009992604,0.000140353,0.00013216113,0.00009035723,0.00003019509],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00024624052,0.00009591186,0.0002446396,0.00005469513,0.00015492913,0.0000048390925,0.000046746594,0.00010475245,0.000019102261],"category_scores_gemma":[0.00005160831,0.000052745687,0.000020882937,0.00012124784,0.00058847,0.000023731418,0.000040920306,0.000198896,4.9388143e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.008355253,0.0015566826,0.6096728,0.00019056234,0.0004345821,0.0010286097,0.026717195,0.00002475128,0.32884738,0.0054807616,0.0057966956,0.011894712],"study_design_scores_gemma":[0.010471311,0.0003372191,0.98058796,0.0002260353,0.00009249926,0.0002406824,0.00011635984,0.0001314649,0.006952248,0.000719448,0.00003758128,0.00008720886],"about_ca_topic_score_codex":0.00022349786,"about_ca_topic_score_gemma":0.00034420402,"teacher_disagreement_score":0.37091514,"about_ca_system_score_codex":0.00004177216,"about_ca_system_score_gemma":0.000051251798,"threshold_uncertainty_score":0.21682425},"labels":[],"label_agreement":null},{"id":"W1997195909","doi":"10.1016/j.humpath.2006.07.003","title":"Comprehensive expression analysis of l-dopa decarboxylase and established neuroendocrine markers in neoadjuvant hormone-treated versus varying Gleason grade prostate tumors","year":2006,"lang":"en","type":"article","venue":"Human Pathology","topic":"Prostate Cancer Treatment and Research","field":"Medicine","cited_by":37,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia; Vancouver General Hospital","funders":"","keywords":"Prostate cancer; Chromogranin A; Neuroendocrine differentiation; Tissue microarray; Androgen receptor; Prostate; Population; Internal medicine; Medicine; Hormone therapy; Hormonal therapy; Androgen; Immunohistochemistry; Endocrinology; Cancer research; Biology; Cancer; Hormone; Breast cancer","score_opus":0.02750831622787099,"score_gpt":0.31303445295401994,"score_spread":0.28552613672614896,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1997195909","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9960603,0.0026149908,0.00000283773,0.00012725462,0.000039211227,0.000577001,0.00003897499,0.00004320946,0.0004962377],"genre_scores_gemma":[0.99867463,0.0003811121,0.00013292317,0.000025215697,0.000025055562,0.000055483924,0.0005056414,0.000026036048,0.00017391681],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99820614,0.00019672215,0.00042252298,0.0004918524,0.00022920583,0.00045358375],"domain_scores_gemma":[0.99917465,0.00013878789,0.00014866098,0.00030888533,0.000110967856,0.000118061806],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000087950575,0.00023200618,0.0006990975,0.0008690714,0.00008767267,0.000016030788,0.00007612885,0.000044043456,0.00003086668],"category_scores_gemma":[0.00003081551,0.00018900116,0.000106896325,0.00081710116,0.00027492095,0.00008940638,0.00009886398,0.0002419062,0.0000014214127],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.007502108,0.0005346569,0.34067154,0.0001361856,0.0002579561,0.013881996,0.00035681707,0.0003585558,0.635025,0.0000335216,0.00035745554,0.0008841721],"study_design_scores_gemma":[0.016711414,0.0016579089,0.9407516,0.00010842912,0.0006921016,0.0001292109,0.00026609935,0.0011595822,0.038178377,0.0000646471,0.00007296426,0.00020765202],"about_ca_topic_score_codex":0.0007359991,"about_ca_topic_score_gemma":0.00011236545,"teacher_disagreement_score":0.6000801,"about_ca_system_score_codex":0.00009368911,"about_ca_system_score_gemma":0.000038897244,"threshold_uncertainty_score":0.77072436},"labels":[],"label_agreement":null},{"id":"W1997320597","doi":"10.1016/j.humpath.2014.03.021","title":"Transformation of Merkel cell carcinoma to ganglioneuroblastoma in intracranial metastasis","year":2014,"lang":"en","type":"article","venue":"Human Pathology","topic":"Polyomavirus and related diseases","field":"Medicine","cited_by":6,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hamilton General Hospital; Niagara Health System; McMaster University","funders":"","keywords":"Merkel cell; Cytokeratin; Merkel cell carcinoma; Pathology; Glial fibrillary acidic protein; Metastasis; Biology; Neurofilament; Carcinoma; Medicine; Immunohistochemistry; Cancer","score_opus":0.01303322786677268,"score_gpt":0.26136667201359465,"score_spread":0.24833344414682196,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1997320597","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99325615,0.00008717679,0.00031786138,0.00020936994,0.00007149027,0.00020983462,0.000012843018,0.000022274355,0.0058130203],"genre_scores_gemma":[0.99934113,0.0000036968308,0.00021577132,0.00027195606,0.000044937562,0.000012157872,0.000016148304,0.000013257507,0.000080930105],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99916285,0.000097310505,0.000299416,0.00015567135,0.00010165098,0.00018309057],"domain_scores_gemma":[0.99961376,0.000024307663,0.000053597178,0.0001698704,0.00003369268,0.000104742416],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014848757,0.00009701152,0.00027083507,0.00028390228,0.000030508354,0.0000023905661,0.0000576943,0.000091479014,0.00010712248],"category_scores_gemma":[0.000028734272,0.00008380709,0.00007262558,0.00015412428,0.00005363302,0.00003512458,0.000014001589,0.000119010525,0.000046540634],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0010389399,0.0015659095,0.019850722,0.0005094836,0.000031001087,0.0013382186,0.0067426674,0.00014755728,0.9457552,0.004795523,0.00067599484,0.017548777],"study_design_scores_gemma":[0.0075933724,0.0035631584,0.84263015,0.000089473426,0.00035965216,0.0005675137,0.00032831897,0.00053980603,0.14193374,0.0006653411,0.0013995668,0.00032989655],"about_ca_topic_score_codex":0.000037489895,"about_ca_topic_score_gemma":0.000028211656,"teacher_disagreement_score":0.8227794,"about_ca_system_score_codex":0.000015172605,"about_ca_system_score_gemma":0.000020331483,"threshold_uncertainty_score":0.3417554},"labels":[],"label_agreement":null},{"id":"W1999251548","doi":"10.1016/s0046-8177(03)00423-4","title":"Secretory carcinoma of the breast: a distinct variant of invasive ductal carcinoma assessed by comparative genomic hybridization and immunohistochemistry","year":2003,"lang":"en","type":"article","venue":"Human Pathology","topic":"Breast Lesions and Carcinomas","field":"Medicine","cited_by":88,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"Immunohistochemistry; Biology; Fusion gene; Fluorescence in situ hybridization; Comparative genomic hybridization; In situ hybridization; Estrogen receptor; Carcinoma; Cancer research; Molecular biology; Breast cancer; Pathology; Gene expression; Gene; Cancer; Chromosome; Medicine; Genetics; Immunology","score_opus":0.016323791510147144,"score_gpt":0.25218694694165017,"score_spread":0.23586315543150302,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1999251548","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9958441,0.0010456108,0.0000762382,0.000042791497,0.000067624525,0.00029688756,0.000120939,0.000008816899,0.0024969827],"genre_scores_gemma":[0.9995026,0.000004032248,0.000091929454,0.00003964308,0.000028906104,0.000017275328,0.00008130897,0.000017813436,0.00021650425],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99879795,0.00020051522,0.00038571013,0.00029459505,0.00013406815,0.000187167],"domain_scores_gemma":[0.9989588,0.00006285577,0.00030296043,0.00043479586,0.00016776941,0.00007278189],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00016784828,0.00017850123,0.00046909612,0.000054968168,0.00012211932,0.0000043789846,0.00011198791,0.00011315862,0.00012592143],"category_scores_gemma":[0.000044834724,0.00014057185,0.00009552429,0.00011440155,0.0005568449,0.000030520343,0.00007191895,0.0001912228,0.0000013649484],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00005747339,0.00014724665,0.19808821,0.00011832142,0.000026714637,0.00008915968,0.00082396605,4.5409618e-7,0.7993174,0.0010627705,0.00025135497,0.000016918246],"study_design_scores_gemma":[0.001390515,0.00018397483,0.9136811,0.000042009597,0.00013875212,0.005968551,0.0005412201,0.000013816173,0.07777364,0.00012672046,0.000023505296,0.000116178664],"about_ca_topic_score_codex":0.00007353108,"about_ca_topic_score_gemma":0.0000071161926,"teacher_disagreement_score":0.7215438,"about_ca_system_score_codex":0.000073739444,"about_ca_system_score_gemma":0.0002585598,"threshold_uncertainty_score":0.57323533},"labels":[],"label_agreement":null},{"id":"W1999590101","doi":"10.1016/j.humpath.2011.01.006","title":"Extramedullary hematopoiesis involving the central nervous system and surrounding structures","year":2011,"lang":"en","type":"article","venue":"Human Pathology","topic":"Myeloproliferative Neoplasms: Diagnosis and Treatment","field":"Medicine","cited_by":31,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Health Sciences Centre; University of Manitoba","funders":"Canada Research Chairs","keywords":"Extramedullary hematopoiesis; Meninges; Central nervous system; Medicine; Pathology; Haematopoiesis; Myelofibrosis; Autopsy; Anemia; Bone marrow; Internal medicine; Biology; Stem cell","score_opus":0.048943748933428406,"score_gpt":0.2678914740843994,"score_spread":0.218947725150971,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1999590101","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9936442,0.0026582503,0.00003828047,0.0001282762,0.00019492861,0.0003568441,0.0000048948823,0.00007057675,0.0029037471],"genre_scores_gemma":[0.99867266,0.000095758944,0.0006341842,0.0002847069,0.00013655091,0.000060320148,0.000011309296,0.00002109636,0.00008341738],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9989156,0.00013294196,0.00022983486,0.0002819279,0.00011477079,0.00032491045],"domain_scores_gemma":[0.99940354,0.000088061824,0.000085466905,0.00027209084,0.00004088663,0.00010993324],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001582655,0.0001768762,0.00033090368,0.00006526284,0.0003190735,0.000024091238,0.00007059717,0.00010182416,0.00015467255],"category_scores_gemma":[0.00003436494,0.00010843808,0.00006249697,0.00005410014,0.00018856711,0.00004233681,0.00005911611,0.00015514475,0.000008952006],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007311371,0.0001553307,0.7413121,0.00033492135,0.0001754043,0.0025591734,0.012309221,4.6613778e-7,0.0035016066,0.23737559,0.00047916724,0.0017239038],"study_design_scores_gemma":[0.0007625161,0.0003085939,0.9877536,0.00010714794,0.00017587564,0.0031408463,0.0025998105,0.000014541203,0.0033495051,0.0014837268,0.00017448484,0.00012930752],"about_ca_topic_score_codex":0.00008777152,"about_ca_topic_score_gemma":0.00008565222,"teacher_disagreement_score":0.24644154,"about_ca_system_score_codex":0.000072644696,"about_ca_system_score_gemma":0.000026280388,"threshold_uncertainty_score":0.44219765},"labels":[],"label_agreement":null},{"id":"W1999601104","doi":"10.1016/j.humpath.2010.09.003","title":"Overexpression of Cullin1 is associated with poor prognosis of patients with gastric cancer","year":2010,"lang":"en","type":"article","venue":"Human Pathology","topic":"Ubiquitin and proteasome pathways","field":"Biochemistry, Genetics and Molecular Biology","cited_by":77,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Vancouver Coastal Health; University of British Columbia; Vancouver Coastal Health Research Institute","funders":"Canadian Institutes of Health Research","keywords":"Cancer research; Cancer; Biology; Metastasis; Medicine; Internal medicine","score_opus":0.01075225921846539,"score_gpt":0.24464663268106895,"score_spread":0.23389437346260356,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1999601104","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9989317,0.00005011685,0.000027933458,0.000016847858,0.00003157019,0.00025321954,0.00020517412,0.000007138094,0.00047629545],"genre_scores_gemma":[0.9990291,0.000008405781,0.00043188068,0.00009289639,0.000038106606,0.00005455054,0.00018862254,0.000021116593,0.0001353374],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99918884,0.000054053577,0.00018388347,0.0002550897,0.00013116206,0.00018694886],"domain_scores_gemma":[0.9992228,0.00000813941,0.0002770047,0.00020982501,0.00023662476,0.000045573222],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000088590365,0.0001306916,0.0002037534,0.000047118436,0.000047485013,0.000003136204,0.00013543485,0.00018439154,0.00016246292],"category_scores_gemma":[0.000033603697,0.000094896066,0.000042082767,0.00008223729,0.0001872677,0.0000029600837,0.00005822448,0.00012779266,9.5128826e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012572067,0.0002137975,0.2917973,0.000022010892,0.000036088033,0.0000017574773,0.00008222792,0.0000012634422,0.7071317,0.000028815337,0.0002543723,0.00030492956],"study_design_scores_gemma":[0.0012635512,0.0014146081,0.23490484,0.00006116746,0.000032421784,0.0000035158089,0.000011032977,0.0000018353256,0.7617678,0.000028206563,0.000386171,0.00012484855],"about_ca_topic_score_codex":0.00001862838,"about_ca_topic_score_gemma":0.00006622177,"teacher_disagreement_score":0.056892473,"about_ca_system_score_codex":0.000004394988,"about_ca_system_score_gemma":0.000052257637,"threshold_uncertainty_score":0.38697493},"labels":[],"label_agreement":null},{"id":"W1999977305","doi":"10.1053/hupa.2001.25904","title":"Primary neuroendocrine (Merkel cell) carcinoma of the skin: Morphologic diversity and implications thereof","year":2001,"lang":"en","type":"article","venue":"Human Pathology","topic":"Polyomavirus and related diseases","field":"Medicine","cited_by":176,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Queen Elizabeth II Health Sciences Centre; Dalhousie University","funders":"","keywords":"Merkel cell carcinoma; Histogenesis; Merkel cell; Pathology; Carcinoma; Medicine; Basal cell carcinoma; Metastasis; Neuroendocrine differentiation; Dermatology; Basal cell; Cancer; Internal medicine; Immunohistochemistry","score_opus":0.025723602897619716,"score_gpt":0.2501733987157504,"score_spread":0.22444979581813068,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1999977305","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9863666,0.0009416621,0.000004699135,0.0005061758,0.000048014605,0.0001848131,0.000017821649,0.000020744455,0.011909425],"genre_scores_gemma":[0.99758625,0.00016735407,0.000015791558,0.00081920996,0.00003076872,0.0000054349935,0.000010125629,0.000007937766,0.0013571117],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99939495,0.0000618652,0.0001340366,0.00018130902,0.000065810775,0.00016199797],"domain_scores_gemma":[0.99944884,0.000025510759,0.00007980449,0.00034947201,0.000029167442,0.000067233006],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000033139215,0.00008840648,0.00017498297,0.000047438993,0.0003589222,0.0000017668145,0.00011546382,0.000043003125,0.00012144617],"category_scores_gemma":[0.000011691786,0.000056682795,0.00007728382,0.00009073298,0.00031252624,0.000018235209,0.00044512932,0.00013717172,0.0000076166966],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000039833158,0.0002595333,0.95213646,0.000028780893,0.000010108828,0.00037674222,0.0001711354,7.6203156e-7,0.04524992,0.00044243294,0.00076241954,0.00052185083],"study_design_scores_gemma":[0.0008455381,0.00016656319,0.9955991,0.0000052412506,0.00013012988,0.0011319546,0.000043016327,0.0000017054635,0.00091611524,0.00044633998,0.00066282233,0.000051508767],"about_ca_topic_score_codex":0.000075650525,"about_ca_topic_score_gemma":0.0000046296705,"teacher_disagreement_score":0.044333804,"about_ca_system_score_codex":0.000013956394,"about_ca_system_score_gemma":0.00001920064,"threshold_uncertainty_score":0.27605757},"labels":[],"label_agreement":null},{"id":"W2001786407","doi":"10.1016/j.humpath.2010.03.001","title":"Evidence for the role of matrix metalloproteinase-13 in bone resorption by giant cell tumor of bone","year":2010,"lang":"en","type":"article","venue":"Human Pathology","topic":"Bone Tumor Diagnosis and Treatments","field":"Medicine","cited_by":27,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University Health Centre; Montreal General Hospital; McMaster University; Hamilton Health Sciences; Juravinski Cancer Centre","funders":"Canadian Institutes of Health Research","keywords":"Bone resorption; Bone matrix; Matrix metalloproteinase; Giant-cell tumor of bone; Resorption; Pathology; Chemistry; Medicine; Internal medicine; Anatomy; Giant cell; Cartilage","score_opus":0.02843278745525861,"score_gpt":0.31162977671304126,"score_spread":0.28319698925778264,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2001786407","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9907977,0.007779223,0.000020563713,0.00029899977,0.00005369526,0.0008552058,0.00002901212,0.000010665056,0.00015492822],"genre_scores_gemma":[0.9981455,0.000105458384,0.0009321098,0.00004256267,0.000032348264,0.00025410016,0.000019356841,0.000017907112,0.0004506273],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9990012,0.00005296249,0.0004094037,0.00021989814,0.00012806902,0.00018847433],"domain_scores_gemma":[0.999039,0.00019848977,0.00026244906,0.00038611857,0.00007384866,0.00004007977],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00047844896,0.00011629274,0.00042466316,0.00010111372,0.00003972906,0.000003034194,0.00007786123,0.00007230209,0.00012860021],"category_scores_gemma":[0.00015370852,0.00008058241,0.00011251622,0.000089722766,0.00017139573,0.000040107636,0.000036180674,0.00017223548,0.000008934807],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00023426714,0.000627001,0.01635011,0.00010450509,0.000013719495,0.00012297217,0.00017867453,4.773494e-7,0.9798382,0.00078067667,0.00017420431,0.0015751718],"study_design_scores_gemma":[0.0032444336,0.0014284725,0.20804513,0.000178,0.00026214047,0.00022855026,0.00015679146,0.0000643216,0.78381896,0.0015788572,0.0008805219,0.00011380797],"about_ca_topic_score_codex":0.00029464762,"about_ca_topic_score_gemma":0.00034439622,"teacher_disagreement_score":0.19601923,"about_ca_system_score_codex":0.000016169543,"about_ca_system_score_gemma":0.000029548906,"threshold_uncertainty_score":0.32860553},"labels":[],"label_agreement":null},{"id":"W2003225134","doi":"10.1016/s0046-8177(03)00406-4","title":"Frequent mutation reversion inversely correlates with clinical severity in a genetic liver disease, hereditary tyrosinemia","year":2003,"lang":"en","type":"article","venue":"Human Pathology","topic":"Metabolism and Genetic Disorders","field":"Biochemistry, Genetics and Molecular Biology","cited_by":69,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval; Centre Hospitalier Universitaire Sainte-Justine","funders":"","keywords":"Reversion; Tyrosinemia; Liver disease; Liver transplantation; Dysplasia; Hepatocellular carcinoma; Chronic liver disease; Medicine; Pathology; Internal medicine; Gastroenterology; Biology; Cirrhosis; Phenotype; Transplantation; Genetics; Gene; Tyrosine","score_opus":0.01585454532605705,"score_gpt":0.26461496550236485,"score_spread":0.2487604201763078,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2003225134","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99544686,0.0027263921,0.0005323857,0.00003200062,0.00023437689,0.00023512072,0.000012528336,0.000010602813,0.0007697407],"genre_scores_gemma":[0.99649096,0.0004761487,0.0018426618,0.00055695703,0.000083087674,0.000023935832,0.00017016642,0.000020462723,0.0003356273],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9985031,0.00036185663,0.0003007012,0.00048239788,0.00010307055,0.00024888522],"domain_scores_gemma":[0.9993786,0.00001390219,0.00009375534,0.0003396636,0.00005209822,0.00012193063],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00026235328,0.00016607656,0.00019287973,0.000056480698,0.0000687713,0.0000087823955,0.00011971985,0.00019636814,0.00011725687],"category_scores_gemma":[0.000101328726,0.00015435244,0.000067091365,0.00008596669,0.00022164789,0.0000046782698,0.000044115593,0.00014690607,0.000029957439],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003447955,0.0004953526,0.9756977,0.00006414961,0.000042885218,0.0012947806,0.00023672766,0.00037492742,0.010728316,0.00066983333,0.0070731384,0.0029773884],"study_design_scores_gemma":[0.0018998176,0.00039903153,0.9879663,0.000021258076,0.0000580572,0.00013704748,0.00011138419,0.00004728679,0.0010693772,0.00090120005,0.00709269,0.00029655825],"about_ca_topic_score_codex":0.00002603641,"about_ca_topic_score_gemma":0.00027083597,"teacher_disagreement_score":0.012268587,"about_ca_system_score_codex":0.000006111087,"about_ca_system_score_gemma":0.00009742467,"threshold_uncertainty_score":0.629431},"labels":[],"label_agreement":null},{"id":"W2003501350","doi":"10.1016/j.humpath.2009.06.017","title":"Contributions of pediatrics and pediatric pathology to the body of knowledge regarding human disease","year":2009,"lang":"en","type":"review","venue":"Human Pathology","topic":"Child and Adolescent Health","field":"Health Professions","cited_by":5,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"","keywords":"Specialty; Pediatrics; Medicine; Disease; Pathology","score_opus":0.07804504448365819,"score_gpt":0.4618706140754199,"score_spread":0.38382556959176173,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2003501350","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.009447613,0.98529434,0.000042357835,0.00023959568,0.00062769547,0.0026878146,0.00084801135,0.00005847391,0.00075411005],"genre_scores_gemma":[0.024584316,0.9718468,0.000025216388,0.00024993683,0.0024595442,0.00006133899,0.00024791464,0.000057503355,0.00046738883],"study_design_codex":"systematic_review","study_design_gemma":"not_applicable","domain_scores_codex":[0.99358016,0.0028795877,0.0019211395,0.0006538937,0.0001765559,0.0007886365],"domain_scores_gemma":[0.9960194,0.00088618085,0.0014397553,0.00092996843,0.0003372879,0.00038739093],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0018771283,0.00045177684,0.0024296485,0.00065586594,0.0011633727,0.0000046720666,0.00050707674,0.0006698179,0.00006369031],"category_scores_gemma":[0.0007686201,0.00032121578,0.00038541434,0.0005687647,0.00020578344,0.000032447824,0.00045163275,0.0015494595,0.00007481659],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00017168578,0.003824448,0.046294305,0.40339574,0.0001704933,0.0009952703,0.014848329,0.000002372778,0.00007334045,0.21079789,0.13216875,0.18725738],"study_design_scores_gemma":[0.0019158239,0.000786309,0.049226042,0.008658366,0.0041356734,0.00006510073,0.00025002006,4.8692516e-7,5.807562e-7,0.0020424267,0.9320332,0.00088601507],"about_ca_topic_score_codex":0.000008367132,"about_ca_topic_score_gemma":0.00003121183,"teacher_disagreement_score":0.7998644,"about_ca_system_score_codex":0.0001400838,"about_ca_system_score_gemma":0.0008986125,"threshold_uncertainty_score":0.999924},"labels":[],"label_agreement":null},{"id":"W2004355892","doi":"10.1016/j.humpath.2013.11.024","title":"B-lymphoblastic leukemia/lymphoma: overexpression of nuclear DNA repair protein PARP-1 correlates with antiapoptotic protein Bcl-2 and complex chromosomal abnormalities","year":2014,"lang":"en","type":"article","venue":"Human Pathology","topic":"PARP inhibition in cancer therapy","field":"Medicine","cited_by":9,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Ottawa; University of Calgary; Calgary Laboratory Services","funders":"","keywords":"Poly ADP ribose polymerase; Biology; Cancer research; DNA repair; Molecular biology; Lymphoma; Nuclear protein; Apoptosis; Karyotype; PARP1; Genome instability; DNA damage; DNA; Genetics; Polymerase; Chromosome; Immunology; Gene; Transcription factor","score_opus":0.016481180279523302,"score_gpt":0.24973734998110414,"score_spread":0.23325616970158083,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2004355892","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99575186,0.00014555713,0.000118362936,0.00009170246,0.000052808842,0.00094037334,0.000016695294,0.00024381978,0.0026388129],"genre_scores_gemma":[0.9972363,0.000009625627,0.0015755491,0.00025279378,0.00016540897,0.000117554504,0.000041108924,0.00007036915,0.0005312882],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9980118,0.0002647529,0.00052624306,0.0005015599,0.00029633215,0.000399261],"domain_scores_gemma":[0.9987853,0.000070498914,0.0003436423,0.0005289871,0.00012797065,0.00014355758],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00027461172,0.0003052221,0.00066058064,0.00015933052,0.00021258397,0.000015827598,0.00011306182,0.00022086562,0.0004008833],"category_scores_gemma":[0.00006324145,0.00024854392,0.00009291444,0.0001176126,0.0009283058,0.00011877819,0.000086015025,0.0001803953,0.000026408834],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0010243277,0.0002505129,0.0032951178,0.0007878636,0.00006922538,0.0001359828,0.0010592705,0.000012764681,0.9827564,0.009643455,0.00065935,0.0003057487],"study_design_scores_gemma":[0.07049161,0.03002367,0.4293404,0.015268567,0.0006599292,0.010545965,0.0019251865,0.0064956513,0.40950835,0.008507016,0.014454695,0.00277898],"about_ca_topic_score_codex":0.00003456855,"about_ca_topic_score_gemma":0.000007312582,"teacher_disagreement_score":0.573248,"about_ca_system_score_codex":0.00015632458,"about_ca_system_score_gemma":0.00011609788,"threshold_uncertainty_score":0.99999666},"labels":[],"label_agreement":null},{"id":"W2005276451","doi":"10.1016/j.humpath.2012.05.026","title":"Microsatellite instability and retrieval of lymph nodes in stage III colon cancer: harbinger or hermit?—reply","year":2012,"lang":"en","type":"article","venue":"Human Pathology","topic":"Genetic factors in colorectal cancer","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Queen Elizabeth II Health Sciences Centre; Dalhousie University","funders":"","keywords":"Microsatellite instability; Stage (stratigraphy); Colorectal cancer; Lymph; Medicine; Cancer; Oncology; Pathology; Internal medicine; Biology; Microsatellite; Genetics; Gene","score_opus":0.04638797666236174,"score_gpt":0.3375497958916586,"score_spread":0.2911618192292969,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2005276451","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9951256,0.0031172992,0.0000044604476,0.000101237034,0.00030727126,0.00038974054,0.000037951562,0.000025466332,0.0008909854],"genre_scores_gemma":[0.99788123,0.00028557537,0.00035541476,0.0004785985,0.00009012154,0.000027963359,0.000008611547,0.000024083805,0.0008484162],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9985937,0.00013073985,0.00041888008,0.00031795737,0.0001436654,0.00039506066],"domain_scores_gemma":[0.9992262,0.00010688569,0.00014131493,0.00033164714,0.00007987882,0.00011403475],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005270599,0.00016740852,0.000505787,0.000119438424,0.00004559349,0.000004960558,0.00008008404,0.00017903335,0.0006911181],"category_scores_gemma":[0.00015626072,0.00014078616,0.000044254513,0.00017025405,0.00045896735,0.00005486577,0.00010301848,0.00019631718,0.000004142148],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0010227512,0.00015258222,0.6457378,0.000209891,0.000012410599,0.000042288153,0.0021766822,0.0000011264106,0.34935462,0.000041028365,0.000028969705,0.00121984],"study_design_scores_gemma":[0.002322311,0.0003378974,0.90387213,0.0000688076,0.000040243387,0.00008032592,0.0001848058,0.0000056482686,0.09116833,0.00003956444,0.0017394252,0.00014050078],"about_ca_topic_score_codex":0.00027971805,"about_ca_topic_score_gemma":0.000266817,"teacher_disagreement_score":0.2581863,"about_ca_system_score_codex":0.00021320551,"about_ca_system_score_gemma":0.00014285455,"threshold_uncertainty_score":0.7567259},"labels":[],"label_agreement":null},{"id":"W2005416314","doi":"10.1016/j.humpath.2009.07.016","title":"Development of consensus guidelines for the histologic recognition of microscopic esophagitis in patients with gastroesophageal reflux disease: the Esohisto project","year":2009,"lang":"en","type":"article","venue":"Human Pathology","topic":"Gastroesophageal reflux and treatments","field":"Medicine","cited_by":133,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Mount Sinai Hospital","funders":"AstraZeneca","keywords":"Medicine; GERD; Gastroenterology; Internal medicine; Esophagitis; Reflux; Biopsy; Endoscopy; Gold standard (test); Pathology; Disease","score_opus":0.07919152642598161,"score_gpt":0.3515565548805139,"score_spread":0.2723650284545323,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2005416314","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99744093,0.00058434636,0.00008408921,0.00024314967,0.000056645007,0.0014325797,0.00006489473,0.00001567712,0.00007770339],"genre_scores_gemma":[0.9871633,0.0000049696714,0.011997303,0.00032232417,0.000026565236,0.000121710626,0.00019954595,0.000013699317,0.00015057814],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9986184,0.00007322407,0.0005907367,0.00026719598,0.0001852935,0.0002651529],"domain_scores_gemma":[0.9988736,0.00008002358,0.00029362063,0.00030812534,0.00039956463,0.000045092456],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00023904115,0.00018340224,0.00038017487,0.000120836856,0.00013076667,0.0000035254063,0.00011743353,0.000059650058,0.000017656856],"category_scores_gemma":[0.00017634369,0.0000962912,0.000073740426,0.00011749506,0.0002615579,0.000017539789,0.000021582144,0.00010771943,0.0000025004804],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.003499825,0.0028522073,0.91711956,0.00034318256,0.00022816051,0.00082166464,0.0018805896,0.00001167242,0.0029893746,0.00022965683,0.0017539667,0.068270154],"study_design_scores_gemma":[0.004802122,0.0017621681,0.99174774,0.0000897715,0.0001669881,0.000023504079,0.00004723389,0.000003967268,0.0010109377,0.0002145756,0.0000825874,0.00004841918],"about_ca_topic_score_codex":0.0000057307334,"about_ca_topic_score_gemma":0.00002030217,"teacher_disagreement_score":0.07462818,"about_ca_system_score_codex":0.00008960539,"about_ca_system_score_gemma":0.00016905485,"threshold_uncertainty_score":0.39266413},"labels":[],"label_agreement":null},{"id":"W2006071440","doi":"10.1016/j.humpath.2015.01.016","title":"Exit competencies in pathology and laboratory medicine for graduating medical students: the Canadian approach","year":2015,"lang":"en","type":"review","venue":"Human Pathology","topic":"Innovations in Medical Education","field":"Medicine","cited_by":29,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Dalhousie University","funders":"","keywords":"Graduation (instrument); Medical education; Graduate medical education; Medical laboratory; Set (abstract data type); Medicine; Psychology; Accreditation; Pathology; Computer science","score_opus":0.13932120819295626,"score_gpt":0.45314774406566394,"score_spread":0.3138265358727077,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2006071440","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0010415178,0.9909451,0.00008698521,0.0030911095,0.00075269846,0.0023756083,0.00003173709,0.000039954615,0.0016352979],"genre_scores_gemma":[0.00045859936,0.9833242,0.0031792652,0.0068871025,0.0018285954,0.002049276,0.0018218954,0.000118534736,0.00033248402],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99630946,0.0006269329,0.0011309565,0.0006008044,0.0007839209,0.0005479385],"domain_scores_gemma":[0.99802405,0.000292219,0.00036507417,0.0005923054,0.00045640353,0.00026992723],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0072890166,0.00037864898,0.001861099,0.0012248917,0.00031738845,0.000022383549,0.0006187752,0.0009375393,0.00008915438],"category_scores_gemma":[0.0048882104,0.00024241736,0.000077936216,0.0009825628,0.0015762006,0.00003260334,0.00014803035,0.0014610018,0.000011313282],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000152326365,0.00046254238,0.0017052003,0.017477699,0.00019867816,0.001627802,0.0069318176,1.3017394e-7,0.0000017500288,0.045115747,0.08732035,0.83914304],"study_design_scores_gemma":[0.0012158889,0.0003213612,0.00058285217,0.0031925556,0.00045862913,0.0021516073,0.0010964931,0.00001671699,2.2801194e-8,0.00093045784,0.98980284,0.00023060013],"about_ca_topic_score_codex":0.001697568,"about_ca_topic_score_gemma":0.016390895,"teacher_disagreement_score":0.90248245,"about_ca_system_score_codex":0.00045943155,"about_ca_system_score_gemma":0.002169807,"threshold_uncertainty_score":0.9885493},"labels":[],"label_agreement":null},{"id":"W2007049381","doi":"10.1016/j.humpath.2007.12.014","title":"An immunohistochemical evaluation of C4d deposition in pediatric inflammatory liver diseases","year":2008,"lang":"en","type":"article","venue":"Human Pathology","topic":"Liver Diseases and Immunity","field":"Medicine","cited_by":43,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Centre Hospitalier Universitaire Sainte-Justine","funders":"Alberta Innovates - Health Solutions","keywords":"Autoimmune hepatitis; Pathology; Medicine; Immunohistochemistry; Viral hepatitis; Hepatitis; Immunostaining; Liver transplantation; Population; Hepatitis B; Hepatitis C; Etiology; Immunology; Transplantation; Internal medicine","score_opus":0.036821946068921155,"score_gpt":0.31462040614230447,"score_spread":0.2777984600733833,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2007049381","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9971931,0.0021205512,0.00001036721,0.0000072475154,0.000039412713,0.00025577718,0.000006709522,0.000023401668,0.0003434214],"genre_scores_gemma":[0.99940825,0.00016110316,0.000060625644,0.000045732853,0.00010347351,0.000030875468,0.00016909851,0.000009665168,0.000011160181],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99904567,0.0002304598,0.00023649688,0.00015189852,0.00021516152,0.000120321616],"domain_scores_gemma":[0.9993889,0.000019234612,0.000082361636,0.00028425493,0.00015758736,0.00006770511],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00017314545,0.000079790196,0.00017815057,0.00015250097,0.000063702704,0.0000014609744,0.000064266234,0.00008225588,0.00019099054],"category_scores_gemma":[0.000056390545,0.000079785124,0.000060576596,0.000084353465,0.0001272739,0.000092677816,0.000025124285,0.0001150919,0.000012578014],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00017734658,0.0009137546,0.9132577,0.000101459256,0.000009022768,0.00025083797,0.00088201725,0.000010207071,0.08360498,0.000077861696,0.000118561686,0.00059622276],"study_design_scores_gemma":[0.0015886632,0.0003082182,0.9958108,0.00001462319,0.00026293937,0.00012132956,0.000044181015,0.00027226072,0.0013759566,0.00012647692,0.0000019171255,0.00007261139],"about_ca_topic_score_codex":0.00003167679,"about_ca_topic_score_gemma":0.0000040468517,"teacher_disagreement_score":0.08255309,"about_ca_system_score_codex":0.000089845256,"about_ca_system_score_gemma":0.00012708222,"threshold_uncertainty_score":0.3253543},"labels":[],"label_agreement":null},{"id":"W2009962689","doi":"10.1016/j.humpath.2014.06.005","title":"BCL2 antibodies targeted at different epitopes detect varying levels of protein expression and correlate with frequent gene amplification in diffuse large B-cell lymphoma","year":2014,"lang":"en","type":"article","venue":"Human Pathology","topic":"Lymphoma Diagnosis and Treatment","field":"Medicine","cited_by":40,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia; BC Cancer Agency; University of Manitoba","funders":"National Cancer Institute; University of Nebraska Medical Center","keywords":"clone (Java method); Fluorescence in situ hybridization; Diffuse large B-cell lymphoma; Biology; Lymphoma; Immunohistochemistry; Chromosomal translocation; Epitope; Gene duplication; Antibody; Monoclonal; Context (archaeology); Monoclonal antibody; Immunophenotyping; Immunoglobulin heavy chain; Cancer research; Molecular biology; Pathology; Immunology; Gene; Medicine; Flow cytometry; Genetics","score_opus":0.01787920913736699,"score_gpt":0.2483347191986855,"score_spread":0.2304555100613185,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2009962689","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9977246,0.0009859565,0.0003491847,0.000046169134,0.000033760927,0.0006497493,0.000024234501,0.000033165266,0.00015318579],"genre_scores_gemma":[0.9985362,0.000092414586,0.0009252341,0.00005129971,0.000025253901,0.00014951598,0.00006354496,0.000024780862,0.00013175113],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9986916,0.00016030653,0.00033564548,0.00039507973,0.00014298865,0.00027438678],"domain_scores_gemma":[0.9992878,0.00006733907,0.00020442293,0.00031454602,0.000044548076,0.00008135195],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001130189,0.0002161478,0.00047282845,0.000145312,0.00011745338,0.000008159439,0.000056052213,0.000123769,0.000026974236],"category_scores_gemma":[0.000029309753,0.00014650311,0.00004506309,0.000055352753,0.000107727144,0.000039396942,0.00008502578,0.000058488764,0.0000064630913],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00017189486,0.0023197776,0.15429854,0.00012636624,0.0000195712,0.00012730675,0.00084046123,0.0000012878473,0.83983946,0.00015350328,0.0000067759297,0.0020950811],"study_design_scores_gemma":[0.0123358155,0.0005524707,0.5754346,0.00017747356,0.000044471224,0.000054221902,0.000018230163,0.000046927875,0.4110795,0.00012608683,0.000030336094,0.000099839264],"about_ca_topic_score_codex":0.000030416097,"about_ca_topic_score_gemma":0.00006001535,"teacher_disagreement_score":0.42875996,"about_ca_system_score_codex":0.000119669116,"about_ca_system_score_gemma":0.0000133226085,"threshold_uncertainty_score":0.5974223},"labels":[],"label_agreement":null},{"id":"W2011065238","doi":"10.1016/j.humpath.2008.01.003","title":"Tumor cell type can be reproducibly diagnosed and is of independent prognostic significance in patients with maximally debulked ovarian carcinoma","year":2008,"lang":"en","type":"article","venue":"Human Pathology","topic":"Ovarian cancer diagnosis and treatment","field":"Medicine","cited_by":241,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Vancouver General Hospital; BC Cancer Agency","funders":"","keywords":"Serous fluid; Grading (engineering); Medicine; Serous carcinoma; Stage (stratigraphy); Clear cell; Oncology; Internal medicine; Multivariate analysis; Disease; Clear cell carcinoma; Carcinoma; Ovarian cancer; Pathology; Cancer; Gastroenterology; Gynecology; Biology","score_opus":0.02188176427768925,"score_gpt":0.23597146189067975,"score_spread":0.2140896976129905,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2011065238","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9977624,0.00024490457,0.0000015235577,0.00035542698,0.000056792385,0.0009962369,0.000033453347,0.000018718076,0.0005305591],"genre_scores_gemma":[0.99866384,0.000040142946,0.00047439482,0.00047695736,0.000032652202,0.00011464905,0.000050813174,0.000031774143,0.0001147669],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99844134,0.000069849535,0.00033525506,0.0006507418,0.00021636809,0.00028644956],"domain_scores_gemma":[0.9990125,0.000051031133,0.00016931444,0.00050802715,0.00014569404,0.00011343512],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000117202515,0.00020178194,0.0004677883,0.00017814248,0.000066544315,0.0000046001473,0.000072971074,0.00007922667,0.0000976613],"category_scores_gemma":[0.000051791532,0.00016593967,0.000032785614,0.00021200012,0.00020488397,0.00003183649,0.000042725304,0.00016146657,0.0000038735097],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00039065216,0.0012892539,0.992367,0.0000945483,0.00002799961,0.0027378225,0.0020206245,0.000001315221,0.000635461,0.000045642195,0.00016839206,0.00022125263],"study_design_scores_gemma":[0.0070712077,0.0035972996,0.98453844,0.00006691934,0.00010154788,0.00010127465,0.000051115665,0.0000013246103,0.0042047137,0.000026160533,0.00008964322,0.00015035292],"about_ca_topic_score_codex":0.00060189015,"about_ca_topic_score_gemma":0.00040031507,"teacher_disagreement_score":0.007828596,"about_ca_system_score_codex":0.00009448922,"about_ca_system_score_gemma":0.00018405412,"threshold_uncertainty_score":0.6766823},"labels":[],"label_agreement":null},{"id":"W2012638782","doi":"10.1016/j.humpath.2011.08.013","title":"The Wnt/β-catenin pathway drives increased cyclin D1 levels in lymph node metastasis in papillary thyroid cancer","year":2011,"lang":"en","type":"article","venue":"Human Pathology","topic":"Thyroid Cancer Diagnosis and Treatment","field":"Medicine","cited_by":72,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"Cyclin D1; Cancer research; Wnt signaling pathway; Thyroid carcinoma; Papillary thyroid cancer; Thyroid cancer; Thyroid; Catenin; Medicine; Cyclin D; Cyclin B; Metastasis; Pathology; Cancer; Biology; Cell cycle; Internal medicine; Signal transduction; Cell biology","score_opus":0.05927086661685973,"score_gpt":0.3065166976968933,"score_spread":0.2472458310800336,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2012638782","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9856447,0.010504801,0.0000045410543,0.00072583725,0.00021478176,0.00047459188,0.000056086352,0.000049138947,0.0023255013],"genre_scores_gemma":[0.9955831,0.002115008,0.00021975777,0.00093708327,0.00009841953,0.0007274708,0.000030221214,0.00004494212,0.00024398653],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9978067,0.00033895325,0.00055792736,0.00053281983,0.0001840584,0.0005794908],"domain_scores_gemma":[0.9990487,0.00014943902,0.00016326454,0.00045597856,0.000052120613,0.00013046681],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00049727067,0.00029723725,0.0005950856,0.00022133271,0.00014487134,0.000013948843,0.00021234356,0.00016934985,0.00026691033],"category_scores_gemma":[0.000059611673,0.00020505144,0.00013889234,0.00023780052,0.00026187842,0.00006618998,0.000101334255,0.00025852802,0.00005801874],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00043544982,0.0033918493,0.9345079,0.00007179196,0.00022574772,0.004701028,0.0060472777,0.0000074066947,0.029374858,0.0036775873,0.0006916871,0.016867436],"study_design_scores_gemma":[0.007968739,0.000285257,0.9696428,0.00012389041,0.00009840121,0.00008488609,0.00040844615,0.0000058178016,0.019096922,0.0014870166,0.0005763221,0.00022148325],"about_ca_topic_score_codex":0.003160547,"about_ca_topic_score_gemma":0.004876681,"teacher_disagreement_score":0.035134938,"about_ca_system_score_codex":0.00029878164,"about_ca_system_score_gemma":0.0001783511,"threshold_uncertainty_score":0.8361755},"labels":[],"label_agreement":null},{"id":"W2013054658","doi":"10.1016/j.humpath.2005.11.002","title":"Expression of Wnt-signaling pathway proteins in intraductal papillary mucinous neoplasms of the pancreas: a tissue microarray analysis","year":2006,"lang":"en","type":"article","venue":"Human Pathology","topic":"Wnt/β-catenin signaling in development and cancer","field":"Biochemistry, Genetics and Molecular Biology","cited_by":51,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University Health Network; Ontario Institute for Cancer Research; University of Toronto","funders":"","keywords":"Tissue microarray; Pathology; Wnt signaling pathway; Mucinous carcinoma; Immunostaining; Carcinogenesis; Cyclin D1; Pancreas; Immunohistochemistry; Biology; Adenoma; Cancer research; Carcinoma; Cancer; Adenocarcinoma; Medicine; Internal medicine; Signal transduction; Endocrinology; Cell cycle","score_opus":0.007044353690946617,"score_gpt":0.22216458624310934,"score_spread":0.21512023255216273,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2013054658","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99787986,0.0010799818,0.0003904418,0.000025389782,0.00007017845,0.00023370962,0.000016599064,0.0000069954826,0.00029682845],"genre_scores_gemma":[0.99839884,0.000020547448,0.0009615337,0.000037299724,0.00010630764,0.000042158994,0.00010520164,0.000017650469,0.00031043077],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99861485,0.00018240664,0.0004731199,0.00035162867,0.0001384571,0.00023955044],"domain_scores_gemma":[0.9992552,0.000012662983,0.0002772266,0.00035197943,0.00007909821,0.000023830638],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00027691384,0.0001661351,0.00033269174,0.00013106728,0.000065856155,0.000005474786,0.000282002,0.00021352991,0.00005859177],"category_scores_gemma":[0.000026343967,0.00012935583,0.00014228211,0.00029310677,0.00020287035,0.0000035169244,0.00012303155,0.00011339895,0.0000010944213],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000043720655,0.00009199173,0.03604065,0.00003182521,0.000041215062,0.000014294469,0.000240328,0.00031405926,0.9628281,0.000065368025,0.00010188219,0.00018657793],"study_design_scores_gemma":[0.00041403965,0.00012761213,0.02986587,0.00004119509,0.000052022704,0.000017840252,0.00005768742,0.0000023738623,0.9686767,0.0002669472,0.00033102473,0.0001466911],"about_ca_topic_score_codex":0.00014942675,"about_ca_topic_score_gemma":0.00023626654,"teacher_disagreement_score":0.006174779,"about_ca_system_score_codex":0.000015676103,"about_ca_system_score_gemma":0.0000760168,"threshold_uncertainty_score":0.52749777},"labels":[],"label_agreement":null},{"id":"W2014959463","doi":"10.1016/j.humpath.2013.07.032","title":"Correlation analysis of angiotensin-converting enzyme, angiotensinogen, and endothelial nitric oxide synthase gene polymorphisms and the progression of immunoglobulin A nephropathy/membranous nephropathy","year":2013,"lang":"en","type":"article","venue":"Human Pathology","topic":"Renin-Angiotensin System Studies","field":"Medicine","cited_by":9,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Institute of Infection and Immunity","keywords":"Enos; Internal medicine; Proteinuria; Endocrinology; Nephropathy; Angiotensin-converting enzyme; Creatinine; Gene polymorphism; Biology; Nitric oxide synthase; Gene; Medicine; Genotype; Kidney; Nitric oxide; Genetics; Blood pressure; Diabetes mellitus","score_opus":0.011632690851422482,"score_gpt":0.2513472192244743,"score_spread":0.2397145283730518,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2014959463","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9843692,0.013233944,0.0005667353,0.0003811517,0.000087366905,0.0011745403,0.000027197038,0.000051598836,0.00010827717],"genre_scores_gemma":[0.99742883,0.00022076459,0.0018245643,0.00021690241,0.000102074766,0.000038378003,0.000040140218,0.00004284915,0.00008549503],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99705815,0.0004910517,0.0011248931,0.00054610986,0.0003642097,0.00041559766],"domain_scores_gemma":[0.99736977,0.0003772385,0.0009112926,0.0006670499,0.00056041515,0.00011426427],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0007738974,0.00036422716,0.0016084771,0.0007398852,0.0002648803,0.0000219209,0.00011765373,0.00025958972,0.000035579887],"category_scores_gemma":[0.0003853007,0.000247463,0.00037436592,0.0007923765,0.0013932176,0.00010073316,0.00021633852,0.00022414343,0.000007804994],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00059849815,0.0001274726,0.17211343,0.000038326612,0.0011694218,0.00021333093,0.0023250803,0.000026864078,0.8195479,0.00019018841,0.000108043285,0.0035414428],"study_design_scores_gemma":[0.0043491554,0.00044578323,0.9512243,0.00016546702,0.0040721726,0.0011003558,0.0002885195,0.0040916298,0.03390957,0.00008231034,0.000020402449,0.00025029966],"about_ca_topic_score_codex":0.0005713024,"about_ca_topic_score_gemma":0.000014001846,"teacher_disagreement_score":0.78563833,"about_ca_system_score_codex":0.00003140414,"about_ca_system_score_gemma":0.000049904564,"threshold_uncertainty_score":0.99999774},"labels":[],"label_agreement":null},{"id":"W2015657065","doi":"10.1016/j.humpath.2009.04.012","title":"Primary frozen section diagnosis by robotic microscopy and virtual slide telepathology: the University Health Network experience","year":2009,"lang":"en","type":"article","venue":"Human Pathology","topic":"AI in cancer detection","field":"Computer Science","cited_by":164,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University Health Network","funders":"","keywords":"Telepathology; Frozen section procedure; Medicine; Medical diagnosis; Medical laboratory; Nuclear medicine; Surgery; Pathology; Health care; Telemedicine","score_opus":0.011837190844234758,"score_gpt":0.25064556274711736,"score_spread":0.2388083719028826,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2015657065","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.7103873,0.0010937987,0.28353357,0.0032022363,0.0009803714,0.00029485725,0.0000028473444,0.00023919817,0.00026584158],"genre_scores_gemma":[0.98765856,0.00042362095,0.0061124214,0.005331496,0.0002273727,0.000012866688,0.000005660136,0.000008929791,0.00021906961],"study_design_codex":"design_other","study_design_gemma":"observational","domain_scores_codex":[0.99834853,0.00041853279,0.00018443739,0.0005462769,0.00011136836,0.00039083304],"domain_scores_gemma":[0.99917763,0.00009366952,0.00015687401,0.0004645749,0.000028828495,0.00007840146],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00036555703,0.00015093136,0.00022275005,0.00006235197,0.0008569998,0.000050009676,0.0005155829,0.00012423401,0.000009508449],"category_scores_gemma":[0.000011641415,0.00013942512,0.000037508675,0.00027880326,0.00027134508,0.00028607473,0.00019346342,0.00028539673,0.000008255914],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002199804,0.00072853087,0.09014323,0.00006809682,0.00006730926,0.00083320023,0.054334417,0.0047818716,0.115317866,0.03960249,0.31491184,0.3789912],"study_design_scores_gemma":[0.0022127228,0.0068822056,0.91114825,0.000095177355,0.000044598048,0.0017969809,0.0009862455,0.0024210345,0.004031702,0.009566689,0.059587438,0.0012269401],"about_ca_topic_score_codex":0.00004452577,"about_ca_topic_score_gemma":0.000051427625,"teacher_disagreement_score":0.82100505,"about_ca_system_score_codex":0.00023108876,"about_ca_system_score_gemma":0.000049936818,"threshold_uncertainty_score":0.6591436},"labels":[],"label_agreement":null},{"id":"W2016280339","doi":"10.1053/hupa.2000.16677","title":"Peritubular capillaries in chronic renal allograft rejection: A quantitative ultrastructural study","year":2000,"lang":"en","type":"article","venue":"Human Pathology","topic":"Renal Transplantation Outcomes and Treatments","field":"Medicine","cited_by":90,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary; University of Alberta","funders":"","keywords":"Nephrosclerosis; Biopsy; Pathology; Medicine; Kidney disease; Nephropathy; Peritubular capillaries; Renal biopsy; Lesion; Glomerulopathy; Kidney; Basement membrane; Glomerular basement membrane; Fibrosis; Glomerulonephritis; Gastroenterology; Urology; Internal medicine; Diabetes mellitus; Endocrinology","score_opus":0.02904579804263821,"score_gpt":0.33652362246315654,"score_spread":0.3074778244205183,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2016280339","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9979293,0.0003030486,0.000014812813,0.00008711048,0.00004705868,0.0004380594,0.000007628562,0.000043398017,0.0011296018],"genre_scores_gemma":[0.99793273,0.00008196252,0.00047333265,0.000095008545,0.00005180206,0.00004338569,0.00008002641,0.000014080508,0.0012276428],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99897283,0.0001239793,0.00026761883,0.00028621432,0.00012636918,0.00022298486],"domain_scores_gemma":[0.999683,0.000028638613,0.000037199556,0.00016918624,0.00002889538,0.00005303323],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0000846563,0.00015010424,0.00031491806,0.0001274903,0.00011416663,0.000012274317,0.00004717051,0.00007041777,0.001303439],"category_scores_gemma":[0.000006591036,0.00012023785,0.00006740787,0.00013622855,0.00012539959,0.000056923953,0.000005050018,0.0001761208,0.000054888777],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0012982094,0.0011061225,0.894405,0.0001619108,0.00044451002,0.016148858,0.021403914,0.00026985287,0.0588632,0.0022263036,0.00006754525,0.0036045462],"study_design_scores_gemma":[0.0049705827,0.0031824608,0.9888699,0.000060128386,0.00010081007,0.001134014,0.000656497,0.0000132259465,0.00047753422,0.0001863267,0.00023136927,0.00011714402],"about_ca_topic_score_codex":0.00015701505,"about_ca_topic_score_gemma":0.00074665766,"teacher_disagreement_score":0.09446488,"about_ca_system_score_codex":0.00010808191,"about_ca_system_score_gemma":0.000045501918,"threshold_uncertainty_score":0.99960953},"labels":[],"label_agreement":null},{"id":"W2017455638","doi":"10.1016/j.humpath.2007.05.015","title":"Recommendations for the reporting of prostate carcinoma","year":2007,"lang":"en","type":"review","venue":"Human Pathology","topic":"Prostate Cancer Diagnosis and Treatment","field":"Medicine","cited_by":51,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Credit Valley Hospital","funders":"","keywords":"Grading (engineering); Medicine; Accreditation; Standardization; Commission; Medical physics; Context (archaeology); Surgical pathology; Pathology; Family medicine; Medical education; Computer science","score_opus":0.29715342464765004,"score_gpt":0.46805513190566833,"score_spread":0.1709017072580183,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2017455638","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0001584661,0.9958689,0.00004052505,0.00032143356,0.00024280741,0.0025410706,0.0001340264,0.000019306675,0.0006734624],"genre_scores_gemma":[0.00033125043,0.9960264,0.00054633635,0.000101297584,0.00017361259,0.0012675878,0.00065290695,0.00004301134,0.0008575921],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9976564,0.000048845133,0.0016864681,0.00030044102,0.00007289207,0.00023496368],"domain_scores_gemma":[0.99666303,0.0003472329,0.0023343973,0.0004772879,0.00013314426,0.00004492537],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008382615,0.00020625682,0.0013583305,0.000121552206,0.00013054367,0.000004928269,0.00008090407,0.00014964318,0.000058867434],"category_scores_gemma":[0.00022230347,0.00011980578,0.00046656426,0.00010761716,0.00010620563,0.0000119234455,0.000043603097,0.00019519648,0.000005211522],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000073153456,0.00010169035,0.00052585156,0.0069931475,0.00014531924,0.00016643082,0.00017021962,3.3912265e-8,7.520107e-7,0.0006297423,0.0033390853,0.9879204],"study_design_scores_gemma":[0.000408887,0.00046555005,0.0006280853,0.0029331879,0.0017861045,0.00047593328,0.00003560293,2.900039e-7,0.000015190853,0.00010369059,0.99305445,0.00009300542],"about_ca_topic_score_codex":0.000013593957,"about_ca_topic_score_gemma":0.0000114823715,"teacher_disagreement_score":0.9897154,"about_ca_system_score_codex":0.00011819658,"about_ca_system_score_gemma":0.000197386,"threshold_uncertainty_score":0.4885538},"labels":[],"label_agreement":null},{"id":"W2018734958","doi":"10.1016/j.humpath.2010.10.018","title":"Residency choices by graduating medical students: why not pathology?","year":2011,"lang":"en","type":"article","venue":"Human Pathology","topic":"Innovations in Medical Education","field":"Medicine","cited_by":72,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"BC Children's Hospital; University of British Columbia","funders":"","keywords":"Personality pathology; Clinical pathology; Medical education; Medicine; Perspective (graphical); Quality (philosophy); Psychology; Pathology; Personality; Family medicine; Personality disorders","score_opus":0.06036776495438819,"score_gpt":0.3889405077661147,"score_spread":0.32857274281172655,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2018734958","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98397064,0.00018456222,0.00074682897,0.0040297196,0.0007721932,0.00031333306,0.0000036131726,0.00015792146,0.009821181],"genre_scores_gemma":[0.96748376,0.000045055313,0.0050747376,0.024657026,0.0005489411,0.0001358366,0.00015286519,0.000043408556,0.0018583466],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99725914,0.00022294403,0.0006849698,0.00049230905,0.0009104208,0.00043024306],"domain_scores_gemma":[0.9987964,0.00006759014,0.00021623955,0.0005461175,0.00022856088,0.00014511406],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0018558044,0.00019497224,0.00038084562,0.00024540495,0.0002324685,0.000014536941,0.00050619646,0.00040991534,0.0036419164],"category_scores_gemma":[0.002615555,0.0001752178,0.00006279607,0.00029577143,0.00055730395,0.000097883436,0.00017247385,0.00075148325,0.00024189867],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001873827,0.0038467783,0.491623,0.00031026342,0.00015732483,0.004366455,0.015204743,5.3916587e-8,0.032429036,0.03823448,0.37777433,0.035866123],"study_design_scores_gemma":[0.0053539937,0.0021698591,0.94471645,0.00043526807,0.000293941,0.0036500746,0.0020623065,0.000033289994,0.0055082617,0.011028283,0.024014913,0.0007333514],"about_ca_topic_score_codex":0.00005770312,"about_ca_topic_score_gemma":0.000033949735,"teacher_disagreement_score":0.45309344,"about_ca_system_score_codex":0.000074212396,"about_ca_system_score_gemma":0.0001358792,"threshold_uncertainty_score":0.9972689},"labels":[],"label_agreement":null},{"id":"W2019822835","doi":"10.1016/j.humpath.2010.07.009","title":"Immunoglobulin A–dominant postinfectious glomerulonephritis: frequent occurrence in nondiabetic patients with Staphylococcus aureus infection","year":2010,"lang":"en","type":"article","venue":"Human Pathology","topic":"Antimicrobial Resistance in Staphylococcus","field":"Medicine","cited_by":49,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Calgary Laboratory Services; Foothills Medical Centre; University of Calgary","funders":"","keywords":"Glomerulonephritis; Staphylococcus aureus; Medicine; Membranoproliferative glomerulonephritis; Renal biopsy; Nephropathy; Proteinuria; Antibody; Immunoglobulin G; Diabetes mellitus; Immunology; Diabetic nephropathy; Immunoglobulin A; Pathology; Biopsy; Internal medicine; Kidney; Biology; Endocrinology","score_opus":0.0064229834131080375,"score_gpt":0.2538303768004306,"score_spread":0.24740739338732254,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2019822835","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99671173,0.00015319361,0.00012703116,0.00007757391,0.0006167315,0.001186899,0.00009330248,0.000115372364,0.000918172],"genre_scores_gemma":[0.9986034,0.000041967392,0.00054911716,0.00030037042,0.00010737098,0.00012498854,0.00017270152,0.000044096574,0.000055970995],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99755585,0.00011854593,0.00060755864,0.00068240426,0.00030077816,0.0007348828],"domain_scores_gemma":[0.9984685,0.00007640084,0.00027747193,0.00068310986,0.0003226352,0.00017184427],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00029974012,0.00038900494,0.00064107386,0.00046378415,0.00019994959,0.000034105622,0.00016001075,0.00034771912,0.00027814487],"category_scores_gemma":[0.00023480444,0.00034816327,0.00011541322,0.00049290597,0.000567373,0.00013145673,0.00008583788,0.0011236263,0.00013575489],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00029713995,0.00078642607,0.816614,0.00009879532,0.000024023542,0.0005548923,0.0002130802,0.000004643843,0.17885312,0.0001766493,0.00028690376,0.0020903174],"study_design_scores_gemma":[0.005088927,0.0013853294,0.98653,0.00019970977,0.000072057795,0.00010489387,0.000015379892,0.0000029938449,0.0046861744,0.00018669768,0.0013432285,0.00038462697],"about_ca_topic_score_codex":0.00029364752,"about_ca_topic_score_gemma":0.0022644498,"teacher_disagreement_score":0.17416695,"about_ca_system_score_codex":0.00017756723,"about_ca_system_score_gemma":0.00015763918,"threshold_uncertainty_score":0.99989706},"labels":[],"label_agreement":null},{"id":"W2022500846","doi":"10.1016/j.humpath.2009.10.001","title":"Factitial soft tissue pseudotumor due to injection of anabolic steroids: a report of 3 cases in 2 patients","year":2009,"lang":"en","type":"article","venue":"Human Pathology","topic":"Genital Health and Disease","field":"Medicine","cited_by":8,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; University Health Network","funders":"","keywords":"Soft tissue; Medicine; Fibrosis; Biopsy; Thigh; Soft tissue sarcoma; Sarcoma; Surgery; Pathology","score_opus":0.020842326254563327,"score_gpt":0.3360570152014415,"score_spread":0.31521468894687815,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2022500846","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9986425,0.0000531589,0.000022668753,0.00006678591,0.00008869421,0.00038739952,0.000019918632,0.000014294446,0.0007045702],"genre_scores_gemma":[0.99923146,4.0380215e-7,0.00008631723,0.00041423785,0.00005654304,0.00000958937,0.000053278032,0.000006693464,0.0001415071],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.999044,0.000046152218,0.00042574602,0.0001837386,0.0001172389,0.00018314339],"domain_scores_gemma":[0.99938124,0.00001336739,0.00013188407,0.00021508447,0.00010945816,0.00014897494],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000093124196,0.000082150786,0.00030843285,0.00024684158,0.000021853704,0.0000011461732,0.000033689255,0.00006546418,0.000061017956],"category_scores_gemma":[0.00021857843,0.000080497804,0.000033140266,0.00013306437,0.000036229187,0.000029983632,0.000014471328,0.00007672924,0.000010321906],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0029438883,0.004025191,0.89255106,0.00078322843,0.000009383792,0.030642055,0.002919816,0.00002861432,0.030767744,0.00021759294,0.0018236658,0.033287738],"study_design_scores_gemma":[0.0014181029,0.0051272702,0.98872715,0.000025492609,0.000019717514,0.0019083378,0.00007087997,9.1455104e-7,0.0024090775,0.00017332316,0.00006080363,0.000058957026],"about_ca_topic_score_codex":0.00019711436,"about_ca_topic_score_gemma":0.00010522255,"teacher_disagreement_score":0.09617604,"about_ca_system_score_codex":0.000031324296,"about_ca_system_score_gemma":0.000074168194,"threshold_uncertainty_score":0.32826054},"labels":[],"label_agreement":null},{"id":"W2023412125","doi":"10.1016/s0046-8177(00)80240-3","title":"Distinction between dysplasia-associated lesion or mass (DALM) and adenoma in patients with ulcerative colitis","year":2000,"lang":"en","type":"article","venue":"Human Pathology","topic":"Inflammatory Bowel Disease","field":"Biochemistry, Genetics and Molecular Biology","cited_by":63,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"Dysplasia; Ulcerative colitis; Adenoma; Medicine; Pathology; Gastroenterology; Colectomy; Familial adenomatous polyposis; Internal medicine; Disease; Cancer; Colorectal cancer","score_opus":0.009876350439908662,"score_gpt":0.23588746237263203,"score_spread":0.22601111193272336,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2023412125","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9985753,0.000008659421,0.000018175204,0.000012458557,0.000020636619,0.00028247753,0.000084136125,0.000014354839,0.0009837501],"genre_scores_gemma":[0.99831396,0.0000058827063,0.000045913825,0.00006211752,0.000058679747,0.000032847776,0.00062771485,0.000020980126,0.0008318975],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99895614,0.00020705938,0.00018557708,0.00034101933,0.00007995521,0.00023026785],"domain_scores_gemma":[0.9996349,0.000009245283,0.00007044566,0.00016512597,0.000050159477,0.000070130445],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009855178,0.00014780491,0.00015628788,0.00004377577,0.00011704276,0.000013844831,0.000067236535,0.00018097827,0.00018475798],"category_scores_gemma":[0.000028251363,0.00012784457,0.0000204314,0.000048071975,0.00013253512,0.0000064702963,0.000028514294,0.00009148569,0.000013432868],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0013226327,0.00010049072,0.9951321,0.000013149269,0.000024751724,0.00024760838,0.00013327721,0.000005876563,0.0012011492,0.00003348372,0.00011715688,0.0016683569],"study_design_scores_gemma":[0.0024787514,0.0006987101,0.9960054,0.000015691652,0.00002248576,0.000005044174,0.00002515458,0.0000026504363,0.0002786753,0.000073192976,0.00022676915,0.00016744238],"about_ca_topic_score_codex":0.0000068789345,"about_ca_topic_score_gemma":0.00043758185,"teacher_disagreement_score":0.0015009146,"about_ca_system_score_codex":0.000035066365,"about_ca_system_score_gemma":0.000032061158,"threshold_uncertainty_score":0.52133507},"labels":[],"label_agreement":null},{"id":"W2023471796","doi":"10.1016/j.humpath.2009.10.005","title":"Pleomorphic and dedifferentiated leiomyosarcoma: clinicopathologic and immunohistochemical study of 41 cases","year":2009,"lang":"en","type":"article","venue":"Human Pathology","topic":"Sarcoma Diagnosis and Treatment","field":"Medicine","cited_by":71,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"London Health Sciences Centre; Western University","funders":"","keywords":"Calponin; Desmin; Leiomyosarcoma; Caldesmon; Pathology; Immunohistochemistry; Sarcoma; Actin; Undifferentiated Pleomorphic Sarcoma; Biology; Smooth Muscle Tumor; Myosin; Anatomy; Soft tissue sarcoma; Medicine; Vimentin; Cell biology","score_opus":0.05534853013325204,"score_gpt":0.34370940078161505,"score_spread":0.288360870648363,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2023471796","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99564177,0.0035600492,0.0000016099169,0.00013419594,0.00003358338,0.00045990903,0.000005661632,0.00003946495,0.00012375762],"genre_scores_gemma":[0.9994722,0.00011145192,0.0001169376,0.0001777826,0.00002924837,0.000023962699,0.00002758159,0.000009890714,0.000030947398],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9988874,0.00011107245,0.0003622255,0.0003506426,0.00009892016,0.00018969204],"domain_scores_gemma":[0.99934286,0.00012225543,0.00011789684,0.00028470604,0.00004939451,0.00008287573],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013454161,0.00017086492,0.00055433565,0.00012022663,0.00008720693,0.0000064752785,0.000046988655,0.00011731137,0.00004565696],"category_scores_gemma":[0.00007300815,0.00013443548,0.000046765577,0.00006223432,0.00020791746,0.000020279718,0.000056463825,0.00015158873,0.000002908428],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00020204204,0.0053089387,0.914601,0.000025583871,0.00005250887,0.006267565,0.0007497964,4.226115e-8,0.06657293,0.0003026144,0.00010637941,0.0058106044],"study_design_scores_gemma":[0.0051162895,0.0064800596,0.982628,0.000029207666,0.00029427896,0.0034523243,0.0003226941,0.0000025071984,0.0011446777,0.00041517938,0.000011617002,0.00010317399],"about_ca_topic_score_codex":0.000021760703,"about_ca_topic_score_gemma":0.000015450396,"teacher_disagreement_score":0.06802699,"about_ca_system_score_codex":0.000017919745,"about_ca_system_score_gemma":0.000015262836,"threshold_uncertainty_score":0.548212},"labels":[],"label_agreement":null},{"id":"W2023474742","doi":"10.1016/j.humpath.2009.01.021","title":"SNP genotyping of a sclerosing rhabdomyosarcoma: reveals highly aneuploid profile and a specific MDM2/HMGA2 amplification","year":2009,"lang":"en","type":"article","venue":"Human Pathology","topic":"Sarcoma Diagnosis and Treatment","field":"Medicine","cited_by":32,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University and Génome Québec Innovation Centre; Université de Montréal; Centre Hospitalier Universitaire Sainte-Justine","funders":"","keywords":"Rhabdomyosarcoma; HMGA2; Amplicon; Biology; Genotyping; Embryonal rhabdomyosarcoma; Alveolar rhabdomyosarcoma; Genetics; Cancer research; Pathology; Sarcoma; Gene; Medicine; Genotype; Polymerase chain reaction; microRNA","score_opus":0.05786935787307723,"score_gpt":0.3061186144642049,"score_spread":0.24824925659112768,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2023474742","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9936461,0.0035885074,0.00018890855,0.00073395896,0.000046370787,0.000545178,0.000009555722,0.000060520277,0.0011809008],"genre_scores_gemma":[0.994136,0.00024093836,0.0049769282,0.00034490603,0.00011077245,0.000039468203,0.00005776446,0.000018395243,0.00007487291],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9987753,0.000076956254,0.0003839222,0.00037923758,0.0001281283,0.00025643612],"domain_scores_gemma":[0.9992153,0.000059043025,0.00017267681,0.00038346348,0.000081316815,0.00008818972],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00020210995,0.00016436537,0.00042750486,0.00017184846,0.0001289349,0.000014862695,0.000061058054,0.00010944638,0.00006567115],"category_scores_gemma":[0.00002857253,0.00014682049,0.00007075415,0.00012804144,0.00013299493,0.000050805265,0.000025896708,0.0001182944,0.00002339923],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008097017,0.00084252516,0.07174932,0.000064142885,0.000027980359,0.00028382128,0.00079842104,3.8735507e-7,0.8823084,0.010412556,0.00065193296,0.03277949],"study_design_scores_gemma":[0.0016593804,0.0006650186,0.9692616,0.000153552,0.00008070008,0.00043028322,0.00007287746,0.0000053144727,0.02547818,0.0016284946,0.00043808715,0.00012650313],"about_ca_topic_score_codex":0.0000067773594,"about_ca_topic_score_gemma":0.0000020602504,"teacher_disagreement_score":0.89751226,"about_ca_system_score_codex":0.000054067157,"about_ca_system_score_gemma":0.000018476592,"threshold_uncertainty_score":0.5987166},"labels":[],"label_agreement":null},{"id":"W2024329838","doi":"10.1016/j.humpath.2006.08.015","title":"Diagnosis of ectopic tissue versus contamination by genetic fingerprinting in a routine surgical pathology specimen","year":2006,"lang":"en","type":"article","venue":"Human Pathology","topic":"Forensic and Genetic Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":19,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Calgary Laboratory Services; University of Calgary","funders":"Calgary Laboratory Services","keywords":"Pathology; Surgical pathology; Medicine; Gallbladder; Thyroid; Cholecystectomy; Gall; Abnormality; Gross examination; Biology; Surgery; Internal medicine","score_opus":0.012668835330163945,"score_gpt":0.29234304857573057,"score_spread":0.2796742132455666,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2024329838","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9947579,0.0013744911,0.00014734564,0.00008032698,0.00010448932,0.00018329114,0.000011922735,0.000006618861,0.0033335963],"genre_scores_gemma":[0.99814326,0.00013620942,0.00046050345,0.000018019375,0.0001770135,0.00005298116,0.0001823702,0.000016626129,0.0008130153],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99859107,0.00020266233,0.00036605264,0.00039326985,0.00011437526,0.0003326014],"domain_scores_gemma":[0.999469,0.00005079926,0.000104338345,0.00027862022,0.000062758096,0.000034510842],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002665348,0.00013676872,0.00024398064,0.00009180938,0.000044978766,0.0000069766543,0.0001643723,0.00022912136,0.00012400915],"category_scores_gemma":[0.00006664147,0.00014195191,0.000051455463,0.00009176847,0.0002498345,0.0000019328095,0.00013443214,0.0001161972,0.000010633278],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00020554186,0.0003503321,0.32226497,0.000042392872,0.00002126776,0.000596822,0.00012196446,0.00007797709,0.65726596,0.0014824759,0.0025800539,0.014990258],"study_design_scores_gemma":[0.004602853,0.0015620833,0.57833135,0.000017681981,0.000018622293,0.00015592371,0.00007063705,0.000025623147,0.40246323,0.0005564138,0.01189283,0.000302724],"about_ca_topic_score_codex":0.00014184251,"about_ca_topic_score_gemma":0.00039398248,"teacher_disagreement_score":0.2560664,"about_ca_system_score_codex":0.000019563468,"about_ca_system_score_gemma":0.000025337924,"threshold_uncertainty_score":0.5788631},"labels":[],"label_agreement":null},{"id":"W2024400031","doi":"10.1016/j.humpath.2013.01.014","title":"High level of mature tumor-infiltrating dendritic cells predicts progression to muscle invasion in bladder cancer","year":2013,"lang":"en","type":"article","venue":"Human Pathology","topic":"Bladder and Urothelial Cancer Treatments","field":"Medicine","cited_by":39,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"Canadian Institutes of Health Research","keywords":"CD68; Bladder cancer; Immunohistochemistry; Medicine; Hazard ratio; Proportional hazards model; Cancer; Pathology; Tumor progression; Oncology; Stroma; Internal medicine; Confidence interval","score_opus":0.05378597756423603,"score_gpt":0.32481538618629313,"score_spread":0.2710294086220571,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2024400031","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99726605,0.000249904,0.000029632387,0.00043191834,0.00023345176,0.00095481856,0.000045800873,0.000035276615,0.0007531178],"genre_scores_gemma":[0.99584347,0.000015806638,0.0021281056,0.0010388122,0.00014985335,0.00033343319,0.000024311672,0.00003076871,0.00043542957],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9987511,0.00007024377,0.00033586347,0.000332193,0.00019128883,0.00031929734],"domain_scores_gemma":[0.9993841,0.000026274145,0.00009307056,0.0002698517,0.00009886767,0.0001278486],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00008918028,0.00016965847,0.00036795216,0.00015738182,0.000054556294,0.00000916138,0.00009081031,0.00013128566,0.0009760656],"category_scores_gemma":[0.000027209282,0.00013665302,0.00004804716,0.00015677317,0.000071440394,0.000072406896,0.00005921584,0.00021231615,0.000060091406],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007277747,0.000420018,0.047844745,0.00022704771,0.000028506047,0.00036963448,0.0019108341,0.000019194498,0.93654495,0.000112674665,0.004130446,0.00831917],"study_design_scores_gemma":[0.002674734,0.0010202357,0.81179255,0.00064434286,0.0000697398,0.000074784686,0.00022767491,0.000014159202,0.18275562,0.00039894946,0.00016016573,0.00016702808],"about_ca_topic_score_codex":0.0009296425,"about_ca_topic_score_gemma":0.0003761094,"teacher_disagreement_score":0.76394784,"about_ca_system_score_codex":0.00007393978,"about_ca_system_score_gemma":0.000086304266,"threshold_uncertainty_score":0.9999372},"labels":[],"label_agreement":null},{"id":"W2024519273","doi":"10.1016/j.humpath.2007.05.013","title":"Review of the Knowledge Hub for Pathology (United States and Canadian Academy of Pathology online educational materials)","year":2007,"lang":"en","type":"article","venue":"Human Pathology","topic":"Radiology practices and education","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Pathology; Medicine; Anatomical pathology","score_opus":0.06773371137073934,"score_gpt":0.4084880918831394,"score_spread":0.34075438051240003,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2024519273","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97011966,0.012894238,0.000015061529,0.015521141,0.00039220447,0.000584059,0.00016628398,0.000007076929,0.00030026404],"genre_scores_gemma":[0.9730304,0.010143845,0.0013794582,0.012913684,0.00043958443,0.000060903578,0.0012646104,0.000030981326,0.0007365607],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99856454,0.00025465072,0.0005630795,0.00025839658,0.00004727409,0.00031204385],"domain_scores_gemma":[0.99869066,0.0003643721,0.0003954404,0.00022616924,0.0002073836,0.00011599633],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0013383903,0.00013402391,0.00047895528,0.00032256695,0.000116939766,0.0000018723399,0.00013848627,0.00027091638,0.0002485978],"category_scores_gemma":[0.0005653515,0.00010319571,0.000059603477,0.00020364736,0.0005148624,0.00003732284,0.000039382834,0.00020832641,0.000003973812],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00088466285,0.0031331794,0.1266132,0.026892303,0.00043985833,0.00018286194,0.013325542,0.000003118619,0.5882072,0.11785232,0.102144115,0.020321665],"study_design_scores_gemma":[0.0011754276,0.00059841765,0.8970543,0.0009644619,0.00039262904,0.003760768,0.0005442796,0.000004834849,0.0030864163,0.0042010807,0.08803455,0.0001828329],"about_ca_topic_score_codex":0.0005094948,"about_ca_topic_score_gemma":0.0024507008,"teacher_disagreement_score":0.7704411,"about_ca_system_score_codex":0.000052010182,"about_ca_system_score_gemma":0.00025149496,"threshold_uncertainty_score":0.42081988},"labels":[],"label_agreement":null},{"id":"W2025511390","doi":"10.1016/j.humpath.2014.12.017","title":"Granulomas and giant cells in hypersensitivity pneumonitis","year":2015,"lang":"en","type":"article","venue":"Human Pathology","topic":"Interstitial Lung Diseases and Idiopathic Pulmonary Fibrosis","field":"Medicine","cited_by":47,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Capital District Health Authority","funders":"","keywords":"Hypersensitivity pneumonitis; Bronchiolitis; Giant cell; Pathology; Medicine; Lung biopsy; Usual interstitial pneumonia; Interstitial lung disease; Fibrosis; Pneumonia; Lung; Pulmonary fibrosis; Biopsy; Internal medicine; Respiratory system","score_opus":0.02981242148508965,"score_gpt":0.2775192644162526,"score_spread":0.24770684293116293,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2025511390","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98773634,0.00036711193,0.00002135647,0.00049105455,0.00016147939,0.00015673255,0.000023278837,0.000034061435,0.011008567],"genre_scores_gemma":[0.99880344,0.00003184737,0.0001778601,0.00044973698,0.00011735178,0.000008538168,0.000020764277,0.000013956529,0.0003764967],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99919736,0.00008997712,0.00015799694,0.00024224157,0.000093574956,0.00021887249],"domain_scores_gemma":[0.9995629,0.000016303547,0.00003115592,0.00016067017,0.000046370347,0.00018259282],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00017659366,0.00010937679,0.00026285887,0.00010706366,0.000039891795,0.000007826373,0.000029739847,0.00009614204,0.000018191993],"category_scores_gemma":[0.000024161447,0.0001025525,0.00004754014,0.000057772497,0.0001727326,0.00004558217,0.000048369104,0.00015485044,0.000042393996],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.002467736,0.0009536935,0.023893785,0.00029775864,0.000034012046,0.04950908,0.0034250652,0.0000038462217,0.8968901,0.010205598,0.0023956532,0.009923676],"study_design_scores_gemma":[0.008908006,0.013850929,0.9392216,0.0005563657,0.0003022764,0.011979453,0.002656698,0.0007859155,0.0068930252,0.0060914136,0.007834711,0.00091959577],"about_ca_topic_score_codex":0.00009613155,"about_ca_topic_score_gemma":0.00004508229,"teacher_disagreement_score":0.91532785,"about_ca_system_score_codex":0.00004592825,"about_ca_system_score_gemma":0.000039471604,"threshold_uncertainty_score":0.41819695},"labels":[],"label_agreement":null},{"id":"W2025560324","doi":"10.1016/j.humpath.2015.03.019","title":"BRAF mutations in pediatric metanephric tumors","year":2015,"lang":"en","type":"article","venue":"Human Pathology","topic":"Renal and related cancers","field":"Biochemistry, Genetics and Molecular Biology","cited_by":48,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Hospital for Sick Children","funders":"","keywords":"Pathology; Carcinoma; Papillary renal cell carcinomas; Renal cell carcinoma; Wilms' tumor; Immunostaining; Medicine; Adenoma; Cancer research; Biology; Oncology; Immunohistochemistry","score_opus":0.019239988515269556,"score_gpt":0.27038325038573774,"score_spread":0.2511432618704682,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2025560324","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9909736,0.0012453783,0.00006362052,0.0000737118,0.00013105661,0.00007156664,0.0000029459097,0.000011019749,0.007427126],"genre_scores_gemma":[0.99821496,0.00009630345,0.00012651301,0.00018740447,0.00018801614,0.000019859204,0.00007814733,0.000011546289,0.0010772737],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99931264,0.0000738327,0.00015837913,0.0002165353,0.000059430335,0.0001791855],"domain_scores_gemma":[0.9996877,0.0000041558583,0.000048906197,0.00015294873,0.000036333397,0.00006999004],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013260722,0.0000859046,0.0001072647,0.00009563209,0.00003351185,0.0000055632418,0.000106085914,0.00013431074,0.000013849437],"category_scores_gemma":[0.000036980706,0.00007670067,0.000041855277,0.00013416348,0.00006453662,0.000002069904,0.00004226105,0.00010625795,0.0000472888],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002586314,0.0006535795,0.29938918,0.00010826316,0.0001325324,0.0028849572,0.0026305204,0.0069820457,0.6448709,0.0063570505,0.03113644,0.004595945],"study_design_scores_gemma":[0.018584838,0.006522701,0.73107,0.00005785187,0.0005134607,0.004806122,0.0021020197,0.00022180007,0.11701527,0.0331249,0.08251618,0.003464851],"about_ca_topic_score_codex":0.000013028622,"about_ca_topic_score_gemma":0.00005156707,"teacher_disagreement_score":0.5278556,"about_ca_system_score_codex":0.000015414787,"about_ca_system_score_gemma":0.00007359293,"threshold_uncertainty_score":0.31277627},"labels":[],"label_agreement":null},{"id":"W2026736745","doi":"10.1016/j.humpath.2011.11.005","title":"Immunohistochemical pitfalls in prostate pathology","year":2012,"lang":"en","type":"review","venue":"Human Pathology","topic":"Urologic and reproductive health conditions","field":"Medicine","cited_by":48,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University Health Centre","funders":"","keywords":"Immunohistochemistry; Pathology; Adenocarcinoma; Medicine; Prostate; Immunostaining; Prostate cancer; Context (archaeology); Anatomical pathology; Surgical pathology; Cancer; Keratin; Intraepithelial neoplasia; Biology; Internal medicine","score_opus":0.10947528410218207,"score_gpt":0.4163421796686922,"score_spread":0.30686689556651014,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2026736745","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0010612798,0.9899043,0.0000063441294,0.00016477641,0.0005647474,0.0017986227,0.000037502396,0.000099645884,0.0063627753],"genre_scores_gemma":[0.00092718285,0.9932201,0.00023606158,0.00041152182,0.00062882155,0.000815801,0.0009127413,0.00008282822,0.0027649289],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99650806,0.000588327,0.0010493704,0.0008892234,0.00013178962,0.0008332524],"domain_scores_gemma":[0.9983101,0.00011143834,0.0004011087,0.0009121675,0.00008101617,0.00018416911],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0007349721,0.0004795842,0.002546223,0.00052358524,0.00011860857,0.0000042926367,0.00019171265,0.00091857876,0.0004678691],"category_scores_gemma":[0.00014650218,0.0003707573,0.00037771754,0.00026489107,0.0006382617,0.000037877333,0.00016157553,0.001747523,0.00078803446],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001072026,0.002672139,0.0012620786,0.036012776,0.00024081119,0.01686781,0.0013710923,7.4935336e-8,0.0005734677,0.008970369,0.004088012,0.92783415],"study_design_scores_gemma":[0.0005937594,0.00043139677,0.0023390236,0.0012004565,0.000809617,0.012617336,0.000012795934,3.501443e-8,0.0000013050025,0.0005276146,0.9811293,0.00033737294],"about_ca_topic_score_codex":0.000006189021,"about_ca_topic_score_gemma":0.000004812919,"teacher_disagreement_score":0.9770413,"about_ca_system_score_codex":0.0002794162,"about_ca_system_score_gemma":0.0003371439,"threshold_uncertainty_score":0.99999},"labels":[],"label_agreement":null},{"id":"W2027382887","doi":"10.1016/j.humpath.2013.03.007","title":"CD34 expression predicts an adverse outcome in patients with NPM1-positive acute myeloid leukemia","year":2013,"lang":"en","type":"article","venue":"Human Pathology","topic":"Acute Myeloid Leukemia Research","field":"Medicine","cited_by":34,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; University Health Network","funders":"","keywords":"Myeloid leukemia; NPM1; Medicine; Adverse effect; Oncology; Internal medicine; Leukemia; CD34; Myeloid; Immunology; Biology; Stem cell; Karyotype; Genetics; Gene","score_opus":0.0167855637421857,"score_gpt":0.2920085030084133,"score_spread":0.2752229392662276,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2027382887","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99477965,0.000013704773,0.00006172863,0.00015991175,0.0000814234,0.0015314219,0.00003286253,0.00012127373,0.003218019],"genre_scores_gemma":[0.9951158,0.0000063008024,0.0014808873,0.0008486068,0.00012156069,0.0002168134,0.00049198157,0.00007486812,0.0016431551],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99724925,0.00027279646,0.0005011244,0.0007144013,0.0004884645,0.00077398936],"domain_scores_gemma":[0.9983399,0.000060465754,0.0001515952,0.00078366237,0.00029008364,0.0003742929],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00025903375,0.00033300635,0.0005981357,0.00042978185,0.00014836386,0.000019282987,0.00029120155,0.00034062364,0.0006880705],"category_scores_gemma":[0.00007466647,0.00025156842,0.00006973385,0.00025008197,0.00036715114,0.00044307174,0.00022587717,0.00085325196,0.00045297286],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0007483226,0.00043296034,0.95927334,0.000047489913,0.000052204992,0.0013027422,0.0016880083,0.000009892394,0.033358227,0.00008517423,0.0017414674,0.0012601905],"study_design_scores_gemma":[0.009023757,0.002561669,0.9851117,0.000108128275,0.00006148437,0.000092054135,0.00023080668,0.000081008795,0.00227706,0.000093469134,0.000099089615,0.00025974456],"about_ca_topic_score_codex":0.00014338162,"about_ca_topic_score_gemma":0.00003797658,"teacher_disagreement_score":0.031081166,"about_ca_system_score_codex":0.0008477846,"about_ca_system_score_gemma":0.00021439369,"threshold_uncertainty_score":0.9999937},"labels":[],"label_agreement":null},{"id":"W2030898588","doi":"10.1016/j.humpath.2012.10.001","title":"Sirtuin 1 (SIRT1): a potential immunohistochemical marker and therapeutic target in soft tissue neoplasms with myoid differentiation","year":2013,"lang":"en","type":"article","venue":"Human Pathology","topic":"Cancer and Skin Lesions","field":"Medicine","cited_by":18,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Leiomyosarcoma; Pathology; Liposarcoma; Sarcoma; Nodular fasciitis; Immunohistochemistry; Smooth Muscle Tumor; Biology; Fibromatosis; Soft tissue; Medicine","score_opus":0.00760535802260449,"score_gpt":0.25196411872737723,"score_spread":0.24435876070477275,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2030898588","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9959286,0.0007637666,0.0016125467,0.0005096094,0.00006887519,0.0003955287,0.000002571119,0.00003379902,0.0006847426],"genre_scores_gemma":[0.9977949,0.000020236985,0.00054409704,0.00039678154,0.00007237649,0.00006844538,0.00005972577,0.000021229303,0.0010222077],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9991752,0.000053005868,0.00017343363,0.0002622811,0.000104162114,0.0002319518],"domain_scores_gemma":[0.9996179,0.00002497583,0.00004540653,0.00020063648,0.00003768412,0.0000734147],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.000064293614,0.00013074995,0.000260117,0.000087581866,0.00007478226,0.000014164743,0.000049020044,0.00012837599,0.002478138],"category_scores_gemma":[0.000010586772,0.000106052255,0.000028279292,0.00005583368,0.00016758809,0.00003530597,0.000034519577,0.00022700758,0.000050694096],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00035182328,0.00029481616,0.052379277,0.0000645662,0.000043604865,0.00039804963,0.0018285068,0.0000057150737,0.93296444,0.00021918821,0.0010584407,0.010391589],"study_design_scores_gemma":[0.0032727364,0.00062766316,0.9898252,0.00005344687,0.000071740425,0.0011199394,0.0001497564,0.00042946002,0.0013776156,0.002191068,0.00068202853,0.00019936208],"about_ca_topic_score_codex":0.00009865231,"about_ca_topic_score_gemma":0.00006537086,"teacher_disagreement_score":0.9374459,"about_ca_system_score_codex":0.000040051316,"about_ca_system_score_gemma":0.000028981107,"threshold_uncertainty_score":0.9984337},"labels":[],"label_agreement":null},{"id":"W2032114183","doi":"10.1053/hupa.2002.126192","title":"Endometrioid carcinoma of the endometrium with an invasive component of minimal deviation carcinoma","year":2002,"lang":"en","type":"article","venue":"Human Pathology","topic":"Endometrial and Cervical Cancer Treatments","field":"Medicine","cited_by":19,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ottawa Hospital; University of Ottawa","funders":"","keywords":"Endometrium; Carcinoma; Medicine; Component (thermodynamics); Oncology; Internal medicine; Gynecology; Pathology; Physics","score_opus":0.049169010885413554,"score_gpt":0.26945527189044244,"score_spread":0.22028626100502888,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2032114183","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9951655,0.00096961565,0.000011636142,0.00011895846,0.000105045016,0.00050629483,0.00003655606,0.000013606835,0.0030727698],"genre_scores_gemma":[0.9992008,0.000021748465,0.00026642645,0.00012393823,0.00009604429,0.00003315114,0.000029527142,0.000019243324,0.00020908695],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9985154,0.00017793702,0.00042931933,0.0002831861,0.00035627783,0.0002378502],"domain_scores_gemma":[0.9986415,0.00026109,0.00032034033,0.0004682628,0.00020297308,0.00010584224],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014471485,0.00017037611,0.00057073537,0.00046021715,0.00007244354,0.0000032736277,0.00017336057,0.000099064884,0.0005075184],"category_scores_gemma":[0.00023028308,0.00010558368,0.00014078054,0.00094655924,0.00027749862,0.000052330684,0.000063561136,0.0001501865,0.000008347759],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0007068918,0.0011743704,0.89757866,0.00017601598,0.00009516521,0.00019082049,0.001084214,0.0000022499141,0.09639682,0.0005963008,0.000049590722,0.0019489003],"study_design_scores_gemma":[0.008496607,0.005981231,0.86125255,0.00003535398,0.00023524332,0.00023864774,0.00017494726,0.000007749662,0.12334458,0.000060700222,0.00007556119,0.00009683358],"about_ca_topic_score_codex":0.00015021472,"about_ca_topic_score_gemma":0.00007105673,"teacher_disagreement_score":0.036326118,"about_ca_system_score_codex":0.00008658499,"about_ca_system_score_gemma":0.000043235097,"threshold_uncertainty_score":0.555697},"labels":[],"label_agreement":null},{"id":"W2032117488","doi":"10.1016/j.humpath.2008.10.018","title":"Diagnostic use of cytokeratins, CD34, and neuronal cell adhesion molecule staining in focal nodular hyperplasia and hepatic adenoma","year":2009,"lang":"en","type":"article","venue":"Human Pathology","topic":"Pancreatic and Hepatic Oncology Research","field":"Medicine","cited_by":41,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ottawa Hospital; University of Ottawa","funders":"","keywords":"Cytokeratin; Pathology; Focal nodular hyperplasia; CD34; Adenoma; Hyperplasia; Staining; Immunohistochemistry; Biology; Medicine; Hepatocellular carcinoma; Stem cell; Cancer research","score_opus":0.03294628532667107,"score_gpt":0.3122749707251431,"score_spread":0.279328685398472,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2032117488","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99826074,0.0006017109,0.00007468548,0.00027038463,0.000014860674,0.00034050122,0.0000048061597,0.00001392494,0.00041839248],"genre_scores_gemma":[0.99751675,0.00023064631,0.0015739199,0.0004825605,0.000031371448,0.00001410801,0.00001731001,0.000012407448,0.000120941506],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9987073,0.00022898175,0.0003322986,0.0002958318,0.00014552638,0.00029009097],"domain_scores_gemma":[0.99901235,0.0005596426,0.00007192813,0.0001861145,0.00004761622,0.0001223684],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00023571994,0.00013643845,0.000503355,0.00018836542,0.00007223399,0.000009811135,0.00004637661,0.00014640547,0.00003688498],"category_scores_gemma":[0.00052191684,0.00012422685,0.000027084876,0.000080536964,0.00024570271,0.000057921778,0.00005562335,0.00027718607,0.0000041814383],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013399408,0.00026329054,0.8947529,0.00009805043,0.0000067233004,0.0019231031,0.0007885378,0.0000018384669,0.10062908,0.00037174186,0.00008265969,0.0009480557],"study_design_scores_gemma":[0.0021680773,0.0032553284,0.9904776,0.000090821224,0.000072528186,0.0005554046,0.00010452569,0.0009162974,0.0019088651,0.0003142897,0.000039898277,0.00009631439],"about_ca_topic_score_codex":0.000029588256,"about_ca_topic_score_gemma":0.000025027157,"teacher_disagreement_score":0.098720215,"about_ca_system_score_codex":0.000026591319,"about_ca_system_score_gemma":0.000060203718,"threshold_uncertainty_score":0.5065824},"labels":[],"label_agreement":null},{"id":"W2033439499","doi":"10.1016/j.humpath.2014.12.005","title":"Evaluation of human tissue kallikrein-related peptidases 6 and 10 expression in early gastroesophageal adenocarcinoma","year":2015,"lang":"en","type":"article","venue":"Human Pathology","topic":"Coagulation, Bradykinin, Polyphosphates, and Angioedema","field":"Medicine","cited_by":7,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; St. Michael's Hospital","funders":"","keywords":"Dysplasia; Kallikrein; Pathology; Malignancy; Adenocarcinoma; Metaplasia; Cancer; Immunohistochemistry; Cancer research; Biology; Medicine; Internal medicine","score_opus":0.0738038351216417,"score_gpt":0.34417885198147036,"score_spread":0.2703750168598287,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2033439499","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99411726,0.0030604058,0.000010313948,0.000054563585,0.0000657602,0.0003988085,0.000003758751,0.000039634637,0.0022495037],"genre_scores_gemma":[0.9986972,0.0000048017005,0.00016377808,0.000029250374,0.00009616814,0.000025297197,0.00009011799,0.000023416495,0.00086991914],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99825346,0.00029327685,0.00045791492,0.00033407472,0.0004233812,0.00023788675],"domain_scores_gemma":[0.9990585,0.000033390414,0.00017435213,0.0002761264,0.00031936943,0.00013825514],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001069188,0.00015996142,0.00037801143,0.0002490048,0.000067309185,0.000009211815,0.0000694641,0.0001722059,0.00038341022],"category_scores_gemma":[0.00016809569,0.0001525771,0.000042167372,0.00011839059,0.00018849286,0.00010289597,0.000057485024,0.00013637464,0.00002351675],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012914557,0.00031339301,0.83769375,0.000058789785,0.000025948713,0.00028267494,0.0077411416,0.000029163873,0.14727631,0.00083698164,0.00072220224,0.0048905127],"study_design_scores_gemma":[0.0046896087,0.0012168419,0.9768762,0.00012852925,0.00014674217,0.00013603379,0.00021669426,0.00014801213,0.013484151,0.0028258865,0.00002300389,0.000108286855],"about_ca_topic_score_codex":0.00008110672,"about_ca_topic_score_gemma":0.00008122236,"teacher_disagreement_score":0.13918248,"about_ca_system_score_codex":0.00006388745,"about_ca_system_score_gemma":0.00008376741,"threshold_uncertainty_score":0.6221913},"labels":[],"label_agreement":null},{"id":"W2034558923","doi":"10.1016/j.humpath.2014.02.006","title":"ARID1A/BAF250a as a prognostic marker for gastric carcinoma: a study of 2 cohorts","year":2014,"lang":"en","type":"article","venue":"Human Pathology","topic":"Chromatin Remodeling and Cancer","field":"Biochemistry, Genetics and Molecular Biology","cited_by":43,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"St. Michael's Hospital; BC Cancer Agency; Vancouver General Hospital; University Health Network; University of British Columbia","funders":"BC Cancer Agency; Canadian Institutes of Health Research","keywords":"ARID1A; Tissue microarray; Medicine; Oncology; Immunohistochemistry; Internal medicine; Cancer; Cohort; Carcinoma; Pathology; Stage (stratigraphy); Pathological; Gastroenterology; Biology; Mutation; Gene; Genetics","score_opus":0.013935540047769226,"score_gpt":0.27637871163045463,"score_spread":0.26244317158268543,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2034558923","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9966068,0.00018708794,0.0016876417,0.000011859248,0.00010622695,0.00053963193,0.000007953821,0.00001254815,0.000840224],"genre_scores_gemma":[0.99877465,0.000003891711,0.00035227303,0.00008388767,0.00017572555,0.00017270668,0.000059165377,0.00002411737,0.00035357958],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99898326,0.00010546916,0.00025355385,0.00035876923,0.00007999498,0.00021897329],"domain_scores_gemma":[0.99933475,0.000023880304,0.00011927605,0.00037221168,0.00010400692,0.00004584289],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00026743437,0.00013238161,0.00023325876,0.000049020404,0.00007643939,0.000006559392,0.0001369817,0.00011447552,0.000019619687],"category_scores_gemma":[0.0001408534,0.00012526524,0.000075645126,0.000045990284,0.00006291953,0.0000011358461,0.0000703062,0.000057259644,0.0000040242003],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00029741958,0.0011986202,0.27913156,0.00018867732,0.0001127549,0.000028539755,0.0006992956,0.00018648758,0.7115679,0.00033588597,0.0024650781,0.003787825],"study_design_scores_gemma":[0.016175954,0.033213563,0.87428194,0.00009567771,0.00070339715,0.00093104463,0.0014944321,0.0022907953,0.056998163,0.0036180285,0.008748056,0.0014489645],"about_ca_topic_score_codex":0.00002611739,"about_ca_topic_score_gemma":0.000055356257,"teacher_disagreement_score":0.6545697,"about_ca_system_score_codex":0.000007998929,"about_ca_system_score_gemma":0.000037843154,"threshold_uncertainty_score":0.5108169},"labels":[],"label_agreement":null},{"id":"W2034813342","doi":"10.1016/j.humpath.2008.04.005","title":"Luminal and cancer cells in the breast show more rapid telomere shortening than myoepithelial cells and fibroblasts","year":2008,"lang":"en","type":"article","venue":"Human Pathology","topic":"Telomeres, Telomerase, and Senescence","field":"Medicine","cited_by":40,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Terry Fox Research Institute","funders":"","keywords":"Telomere; Myoepithelial cell; Cancer cell; Breast cancer; Biology; Cancer; Fluorescence in situ hybridization; Pathology; In situ hybridization; Cell; Cancer research; Chromosome; Genetics; Medicine; Gene; Immunology; Immunohistochemistry; Gene expression","score_opus":0.023205159969284666,"score_gpt":0.26742556048617105,"score_spread":0.2442204005168864,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2034813342","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9970279,0.0014260558,0.000009252987,0.00061201904,0.00015672267,0.00033042082,0.000057202906,0.000038496808,0.00034196203],"genre_scores_gemma":[0.99735445,0.0008877614,0.00022741473,0.0006838129,0.0004056694,0.000022940176,0.000014530778,0.00003008304,0.00037333838],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99836,0.00014587963,0.00030368648,0.0005032126,0.00021900897,0.000468209],"domain_scores_gemma":[0.99932104,0.00008508324,0.00008469768,0.0003218289,0.00004695483,0.00014039427],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00023885601,0.00026413513,0.00045225554,0.00018543885,0.00026206166,0.000018853918,0.00014236095,0.00017257543,0.00012352694],"category_scores_gemma":[0.000009241033,0.00019397239,0.00005809145,0.00016545887,0.0008203262,0.000080244696,0.00007572865,0.00041669418,0.00000931093],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00042382983,0.0003130095,0.30835885,0.00027494217,0.000049393548,0.0068382523,0.027750604,0.0000069006137,0.6204453,0.00012550864,0.002761624,0.03265177],"study_design_scores_gemma":[0.0019571453,0.0004933884,0.9692397,0.00016921436,0.00007955885,0.010945652,0.002093674,0.00006835805,0.013053364,0.000042434913,0.0015111903,0.000346294],"about_ca_topic_score_codex":0.0001682938,"about_ca_topic_score_gemma":0.0002207089,"teacher_disagreement_score":0.66088086,"about_ca_system_score_codex":0.000027197606,"about_ca_system_score_gemma":0.000062459585,"threshold_uncertainty_score":0.79099643},"labels":[],"label_agreement":null},{"id":"W2035174205","doi":"10.1016/j.humpath.2015.04.002","title":"Traditional serrated adenoma: an update","year":2015,"lang":"en","type":"review","venue":"Human Pathology","topic":"Colorectal Cancer Screening and Detection","field":"Medicine","cited_by":73,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; University Health Network","funders":"","keywords":"Hyperplastic Polyp; KRAS; GNAS complex locus; Dysplasia; Cancer research; Colorectal cancer; Pathology; CDKN2A; Adenoma; Cancer; Biology; Medicine; Internal medicine; Genetics; Gene; Colonoscopy","score_opus":0.24300093860658886,"score_gpt":0.4021602054696402,"score_spread":0.15915926686305135,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2035174205","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0005974744,0.9922134,0.000028873526,0.00002151989,0.000475297,0.0004302591,0.00007084575,0.00022551627,0.005936801],"genre_scores_gemma":[0.0007912617,0.9919228,0.00022924024,0.00017424441,0.001581241,0.00020034362,0.003583196,0.00008729965,0.001430407],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99842966,0.00025395374,0.00039780536,0.00049077574,0.00018579204,0.00024204196],"domain_scores_gemma":[0.9990731,0.000018755401,0.00019685114,0.00038432755,0.00011609376,0.00021088443],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00030335845,0.0002930829,0.0012958935,0.0002679543,0.000099410856,0.000016036243,0.00011680684,0.0005075763,0.00047982205],"category_scores_gemma":[0.000024348303,0.00025047804,0.00023622128,0.00021306843,0.00010646755,0.00005369633,0.000031752155,0.00061522477,0.00028694366],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00019704153,0.00019282228,0.000004142085,0.002786248,0.00010783544,0.0012851221,0.00010673155,2.6918693e-7,0.000005478007,0.0007079956,0.009366854,0.98523945],"study_design_scores_gemma":[0.0005130364,0.0029897285,0.000099371464,0.00090499123,0.00074851984,0.0066336063,0.000010184695,0.000004071613,7.32434e-7,0.0004194427,0.98743594,0.00024035595],"about_ca_topic_score_codex":0.000008262168,"about_ca_topic_score_gemma":0.000026175938,"teacher_disagreement_score":0.9849991,"about_ca_system_score_codex":0.00019963348,"about_ca_system_score_gemma":0.00036150787,"threshold_uncertainty_score":0.99999475},"labels":[],"label_agreement":null},{"id":"W2036564756","doi":"10.1016/j.humpath.2008.06.013","title":"Multiple endocrine neoplasia type 1–associated thyrotropin-producing pituitary carcinoma: report of a probable de novo example","year":2008,"lang":"en","type":"article","venue":"Human Pathology","topic":"Pituitary Gland Disorders and Treatments","field":"Medicine","cited_by":55,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"St. Michael's Hospital; University of Toronto","funders":"Mayo Clinic","keywords":"Pathology; Multiple endocrine neoplasia; Medicine; Endocrine system; Carcinoma; Immunohistochemistry; Metastatic carcinoma; Pituitary adenoma; Adenoma; Pituitary gland; Internal medicine; Biology; Hormone","score_opus":0.04506877250276767,"score_gpt":0.2785320788561421,"score_spread":0.23346330635337445,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2036564756","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99583554,0.0006045091,0.000035163266,0.00010750805,0.00012205208,0.00044329316,0.00001054237,0.000081296,0.0027600972],"genre_scores_gemma":[0.9963115,0.00004737152,0.0011517266,0.00015506198,0.000077975674,0.000035129324,0.000373152,0.000029944433,0.0018181255],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99851394,0.00006834909,0.0003955614,0.00042419988,0.0001553285,0.00044265206],"domain_scores_gemma":[0.9990364,0.000039690578,0.00016752603,0.00049811695,0.00014610325,0.00011219458],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012844223,0.000189932,0.00050254713,0.00012547345,0.00018020291,0.0000023520313,0.0000792125,0.00009825855,0.00010071832],"category_scores_gemma":[0.00024985542,0.00016702613,0.00009864095,0.00017618563,0.0001323401,0.00005202186,0.000059770027,0.00016141318,0.000020830366],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014715768,0.0007716311,0.9570613,0.000050690393,0.00008351702,0.02525338,0.0009213896,0.000008761931,0.014364413,0.00006050814,0.001212414,0.0000648734],"study_design_scores_gemma":[0.005233382,0.0011952282,0.9707017,0.000032271677,0.00012961405,0.019008657,0.00007440702,0.000015086583,0.0025506932,0.00038882555,0.0005164445,0.00015366811],"about_ca_topic_score_codex":0.0010892313,"about_ca_topic_score_gemma":0.0007533592,"teacher_disagreement_score":0.013640459,"about_ca_system_score_codex":0.000088235625,"about_ca_system_score_gemma":0.0001940719,"threshold_uncertainty_score":0.68111277},"labels":[],"label_agreement":null},{"id":"W2040896833","doi":"10.1016/j.humpath.2006.12.004","title":"Survivin and hedgehog protein expression in serrated colorectal polyps: an immunohistochemical study","year":2007,"lang":"en","type":"article","venue":"Human Pathology","topic":"Hedgehog Signaling Pathway Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":25,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"London Health Sciences Centre; Western University","funders":"","keywords":"Smoothened; Hyperplastic Polyp; Hedgehog signaling pathway; Patched; Survivin; Biology; Hedgehog; Pathology; Immunohistochemistry; Cancer research; GLI1; Medicine; Apoptosis; Cancer; Colorectal cancer; Cell biology; Signal transduction","score_opus":0.017825918577883775,"score_gpt":0.30532824651020285,"score_spread":0.28750232793231906,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2040896833","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99830353,0.0005052311,0.00013334244,0.000009892449,0.000073893854,0.0005856453,0.000005458376,0.000032050568,0.00035092758],"genre_scores_gemma":[0.9992585,0.0000042842557,0.00027007758,0.000041482384,0.000110401845,0.000070618116,0.00006777544,0.000031320247,0.0001455067],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99826986,0.0002793996,0.00035542098,0.0005925486,0.00010462707,0.00039812937],"domain_scores_gemma":[0.9994182,0.000016674183,0.0000839488,0.00032834458,0.0000635644,0.000089296664],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008913541,0.00021967961,0.00027229293,0.00011368778,0.00014853895,0.00001368856,0.00017899672,0.0002545361,0.000010842269],"category_scores_gemma":[0.00011634886,0.00021637096,0.00003239648,0.00010413816,0.00022904832,0.0000054545735,0.00022665807,0.0002077126,0.0000041116127],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00020642226,0.00041646935,0.042786203,0.000009105188,0.000012032785,0.00012747773,0.0012191437,0.0000012027608,0.95492226,0.000011546629,0.00003072201,0.00025741963],"study_design_scores_gemma":[0.0014589804,0.0019039938,0.24211386,0.000020139545,0.000008471274,0.000056247427,0.0015834514,0.0000037621912,0.75236833,0.000053757125,0.00013140871,0.00029757718],"about_ca_topic_score_codex":0.000047181486,"about_ca_topic_score_gemma":0.001076082,"teacher_disagreement_score":0.2025539,"about_ca_system_score_codex":0.000027326909,"about_ca_system_score_gemma":0.000030363266,"threshold_uncertainty_score":0.8823352},"labels":[],"label_agreement":null},{"id":"W2041766777","doi":"10.1016/j.humpath.2006.11.023","title":"Telomere length variations in 6 mucosal cell types of gastric tissue observed using a novel quantitative fluorescence in situ hybridization method","year":2007,"lang":"en","type":"article","venue":"Human Pathology","topic":"Telomeres, Telomerase, and Senescence","field":"Medicine","cited_by":50,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Terry Fox Research Institute","funders":"Ministry of Education, Culture, Sports, Science and Technology","keywords":"Telomere; Biology; Fluorescence in situ hybridization; Centromere; Foveolar cell; In situ hybridization; Cell; Molecular biology; Pathology; DNA; Stomach; Chromosome; Genetics; Gastric mucosa; Gene; Messenger RNA; Biochemistry; Medicine","score_opus":0.08419228729844944,"score_gpt":0.3636549224388754,"score_spread":0.279462635140426,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2041766777","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9126535,0.00025301543,0.08589648,0.000043899086,0.000101674894,0.0003687449,0.000012636776,0.000029785362,0.0006402707],"genre_scores_gemma":[0.8427121,0.000021963162,0.15704373,0.000056346253,0.00003977335,0.0000056713498,0.000041376185,0.000022156315,0.000056905912],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9981793,0.00018485586,0.0006576012,0.00039647004,0.00019163253,0.00039013225],"domain_scores_gemma":[0.9989582,0.00028423572,0.00024273596,0.0002697958,0.00016624651,0.000078814366],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008983004,0.00018500828,0.00049649854,0.0007652022,0.000060727358,0.0000064379515,0.00012399803,0.00015896183,0.00005001052],"category_scores_gemma":[0.00035828218,0.00019197432,0.000046077483,0.0009704355,0.00012050144,0.00011284131,0.000048049682,0.00029397514,0.000008673374],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011738594,0.0005296303,0.06327273,0.0001165634,0.000007877422,0.00026178485,0.0025471188,0.00015689195,0.92730355,0.0041501354,0.0000054604584,0.0015308929],"study_design_scores_gemma":[0.0025967327,0.00050545944,0.86154485,0.00016152964,0.00006807232,0.00020719995,0.00092760293,0.0018862905,0.13145927,0.00035137188,0.00003835151,0.000253271],"about_ca_topic_score_codex":0.00037224928,"about_ca_topic_score_gemma":0.0010464817,"teacher_disagreement_score":0.79827213,"about_ca_system_score_codex":0.00012165269,"about_ca_system_score_gemma":0.00014078463,"threshold_uncertainty_score":0.78284854},"labels":[],"label_agreement":null},{"id":"W2042363537","doi":"10.1016/j.humpath.2007.04.006","title":"Spatial resolution requirements for acquisition of the virtual screening slide for digital whole-specimen breast histopathology","year":2007,"lang":"en","type":"article","venue":"Human Pathology","topic":"AI in cancer detection","field":"Computer Science","cited_by":12,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Health Sciences Centre; Sunnybrook Health Science Centre; University of Toronto","funders":"","keywords":"Histopathology; Malignancy; Medicine; Breast cancer; Gold standard (test); Specialty; Breast imaging; Receiver operating characteristic; Sampling (signal processing); Radiology; Image resolution; Digital pathology; Medical physics; Pathology; Mammography; Artificial intelligence; Computer science; Cancer; Internal medicine; Computer vision","score_opus":0.03292699772400237,"score_gpt":0.2848834500725904,"score_spread":0.25195645234858804,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2042363537","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.11882915,0.000025206731,0.8789193,0.0003485388,0.0009254304,0.0005325756,0.00006550511,0.000069908536,0.00028437562],"genre_scores_gemma":[0.98740876,4.4151108e-7,0.011623025,0.0001781833,0.00040723314,0.00006977371,0.000033090935,0.000017866903,0.00026164335],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9984381,0.000068807974,0.0004565905,0.00045345098,0.00019183152,0.00039120877],"domain_scores_gemma":[0.9987573,0.00012795557,0.0003713783,0.0005174499,0.00018432333,0.000041589665],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00085360795,0.00014279562,0.00020946488,0.0001493777,0.00033958917,0.000034976274,0.0005731491,0.0001543504,0.0000053298854],"category_scores_gemma":[0.000057937326,0.00013148849,0.00014249403,0.00014053822,0.00020534503,0.00037072852,0.0002421687,0.00010762877,0.0000036253016],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0010527446,0.0003300051,0.0059142914,0.00009284409,0.000043265536,0.00003824036,0.0032607557,0.00041061846,0.52153474,0.11567197,0.0032703013,0.34838024],"study_design_scores_gemma":[0.014037285,0.009949955,0.72072667,0.0003182869,0.00018555402,0.0026009562,0.0006455264,0.024091372,0.09915711,0.09023716,0.036236107,0.0018139924],"about_ca_topic_score_codex":0.00001226707,"about_ca_topic_score_gemma":0.00006667204,"teacher_disagreement_score":0.86857957,"about_ca_system_score_codex":0.00019682669,"about_ca_system_score_gemma":0.000034495086,"threshold_uncertainty_score":0.5361945},"labels":[],"label_agreement":null},{"id":"W2043202290","doi":"10.1016/j.humpath.2011.08.012","title":"Assessment of the prognostic significance of endoglin (CD105) in clear cell renal cell carcinoma using automated image analysis","year":2011,"lang":"en","type":"article","venue":"Human Pathology","topic":"Renal cell carcinoma treatment","field":"Medicine","cited_by":32,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"St. Michael's Hospital; London Health Sciences Centre; University of Toronto","funders":"","keywords":"Endoglin; CD31; Hazard ratio; Medicine; Angiogenesis; Renal cell carcinoma; Proportional hazards model; Oncology; Internal medicine; Receiver operating characteristic; Stage (stratigraphy); Immunohistochemistry; Pathology; Confidence interval; Biology; CD34; Stem cell","score_opus":0.05057907476539494,"score_gpt":0.3020641489869086,"score_spread":0.25148507422151367,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2043202290","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99215484,0.00014233099,0.00014728673,0.0000059282834,0.0000390021,0.0006907326,0.000017488577,0.00003376818,0.006768613],"genre_scores_gemma":[0.99232584,0.0000029629182,0.007459726,0.000019228453,0.000015832982,0.000029979115,0.000018473176,0.000026433974,0.0001015342],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99796903,0.0003978926,0.00066685025,0.000393986,0.00025589135,0.000316354],"domain_scores_gemma":[0.9985749,0.000071800765,0.000458764,0.0006797216,0.00014361004,0.00007121145],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000347244,0.00020685064,0.0006914588,0.00038572637,0.000047869904,0.0000034714074,0.00020338538,0.00012179774,0.00021738985],"category_scores_gemma":[0.000024096504,0.00015288965,0.00026930228,0.00062214705,0.00030772842,0.000034276887,0.00010744868,0.00023107015,0.0000037594734],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000038494774,0.00051522686,0.47735524,0.00012149911,0.00004015282,0.00042481854,0.00060687994,0.000055447592,0.52080095,0.000025907788,0.0000050010663,0.000010370727],"study_design_scores_gemma":[0.0010636575,0.0006733905,0.7303459,0.00002488725,0.00089843944,0.000025369398,0.00014004964,0.002093238,0.26462305,0.000027781169,9.512633e-7,0.00008330043],"about_ca_topic_score_codex":0.00041155244,"about_ca_topic_score_gemma":0.000067834575,"teacher_disagreement_score":0.2561779,"about_ca_system_score_codex":0.00015310402,"about_ca_system_score_gemma":0.00017238806,"threshold_uncertainty_score":0.6234659},"labels":[],"label_agreement":null},{"id":"W2044871182","doi":"10.1016/j.humpath.2006.04.028","title":"Fatty lesions of the atria and interatrial septum","year":2006,"lang":"en","type":"article","venue":"Human Pathology","topic":"Cardiac tumors and thrombi","field":"Medicine","cited_by":29,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Ottawa; Ottawa Hospital; University Health Network; University of Toronto","funders":"","keywords":"Interatrial septum; Medicine; Surgical pathology; Atrial septum; Radiology; Lipomatosis; Left atrium; Pathology; Internal medicine; Cardiology; Atrial fibrillation","score_opus":0.01396470699960701,"score_gpt":0.27243067736435544,"score_spread":0.25846597036474844,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2044871182","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9908801,0.00019833735,0.000019350959,0.00023665336,0.00029639452,0.00014129389,0.000009103774,0.000012726088,0.008206042],"genre_scores_gemma":[0.99882007,0.000003059283,0.000058676793,0.00008811359,0.00025043436,0.0000027887402,0.000007209538,0.000006950725,0.0007627029],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99952143,0.000055911358,0.00015620241,0.00011389562,0.000057414574,0.00009516273],"domain_scores_gemma":[0.9996824,0.000024126159,0.00005179546,0.00019491365,0.000025700101,0.000021031461],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000103395665,0.00005810871,0.00020985094,0.000033131095,0.00006372489,0.0000033708359,0.00003490108,0.000053432057,0.000080510246],"category_scores_gemma":[0.000023569186,0.00003778086,0.00011446233,0.00004678747,0.0001824066,0.000009770198,0.00006525166,0.00010389118,0.0000052375262],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012809258,0.00025670693,0.48432732,0.000087528126,0.000050477967,0.00034457637,0.0008043776,0.0000026705402,0.42099684,0.07463544,0.016874747,0.0014912444],"study_design_scores_gemma":[0.0014646021,0.00015305523,0.9891919,0.000022307691,0.00008601389,0.00026626734,0.000043401385,0.000002191171,0.003766518,0.0030689337,0.0018885096,0.000046313042],"about_ca_topic_score_codex":0.000047184894,"about_ca_topic_score_gemma":0.000046006404,"teacher_disagreement_score":0.5048646,"about_ca_system_score_codex":0.000008520858,"about_ca_system_score_gemma":0.000016210934,"threshold_uncertainty_score":0.15406588},"labels":[],"label_agreement":null},{"id":"W2046900843","doi":"10.1016/j.humpath.2010.10.019","title":"Development and evolution of The Knowledge Hub for Pathology and related electronic resources","year":2011,"lang":"en","type":"article","venue":"Human Pathology","topic":"Radiology practices and education","field":"Medicine","cited_by":10,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"Web site; Principal (computer security); Anatomical pathology; Medicine; Pathology; Library science; Medical education; Computer science; The Internet; World Wide Web","score_opus":0.04023291461437632,"score_gpt":0.299437849901997,"score_spread":0.2592049352876207,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2046900843","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9942604,0.0023874363,0.00003511442,0.00018867895,0.0001187587,0.00024533554,5.8054155e-7,0.000012485055,0.002751233],"genre_scores_gemma":[0.99818754,0.000046270383,0.00080495345,0.00004372306,0.000030350386,0.00003223013,0.000004535832,0.000007920131,0.00084246753],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99934524,0.00009764829,0.00018901708,0.00017656133,0.000022348806,0.00016918905],"domain_scores_gemma":[0.99960643,0.000050099614,0.00012894931,0.0001409694,0.000046482233,0.000027095735],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003998027,0.00006826321,0.0001606596,0.000066490895,0.00013672505,0.0000013619148,0.00004281435,0.00013995901,0.000021768854],"category_scores_gemma":[0.00008923608,0.000048924085,0.000020817264,0.00004830317,0.0002499471,0.00002735322,0.00003342186,0.00013180065,0.0000024452356],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0008239095,0.0008973221,0.47403613,0.00045814423,0.00027791603,0.0000593865,0.16536392,3.3082023e-7,0.14771721,0.18248253,0.0009178994,0.026965298],"study_design_scores_gemma":[0.00081165135,0.00050423597,0.9818589,0.000018474038,0.000106984015,0.0014832066,0.00094940397,0.000009302175,0.0010362288,0.0054686754,0.0076907314,0.00006217934],"about_ca_topic_score_codex":0.000005018436,"about_ca_topic_score_gemma":0.000037432197,"teacher_disagreement_score":0.5078228,"about_ca_system_score_codex":0.000040293446,"about_ca_system_score_gemma":0.00007870612,"threshold_uncertainty_score":0.19950663},"labels":[],"label_agreement":null},{"id":"W2048342249","doi":"10.1053/hupa.2001.23526","title":"Differential expression of the cell-adhesion molecule Nr-CAM in hyperplastic and neoplastic human pancreatic tissue","year":2001,"lang":"en","type":"article","venue":"Human Pathology","topic":"Wnt/β-catenin signaling in development and cancer","field":"Biochemistry, Genetics and Molecular Biology","cited_by":25,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Public Health Agency of Canada","keywords":"Cell adhesion molecule; Pathology; Pancreas; Immunohistochemistry; Immunoglobulin superfamily; Hyperplasia; Biology; Neural cell adhesion molecule; Cell; Adenocarcinoma; Cell adhesion; Cadherin; Pathogenesis; Cancer research; Cell biology; Medicine; Endocrinology; Cancer; Biochemistry","score_opus":0.009378988078034308,"score_gpt":0.24135451058187285,"score_spread":0.23197552250383854,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2048342249","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9984568,0.00035801544,0.00027373328,0.000013969124,0.00012326676,0.00014582682,0.0000026024063,0.000006998258,0.0006188228],"genre_scores_gemma":[0.99865746,0.00006979051,0.00007496139,0.000040372117,0.00008215071,0.000027986951,0.000032898854,0.000019206485,0.0009951814],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9990057,0.00011423182,0.00024858894,0.00031154734,0.000101544516,0.00021840534],"domain_scores_gemma":[0.9995741,0.000017985827,0.00010454172,0.00023712589,0.00002833079,0.000037866837],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00006703565,0.00015365377,0.0001921037,0.000055140077,0.00011945354,0.000009022234,0.00017973426,0.00016407407,0.00012073213],"category_scores_gemma":[0.000026378842,0.00011782481,0.000038255588,0.00006761003,0.00015700674,0.0000029425976,0.00018424034,0.00010633313,0.0000037827822],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000036652793,0.000059053797,0.04634429,0.00002333704,0.000003666131,0.000010400464,0.00012418568,0.000018174955,0.95307696,0.000028219725,0.00019067388,0.00008438775],"study_design_scores_gemma":[0.0008046698,0.00024580772,0.094447486,0.000058295118,0.000022753686,0.000041002204,0.00003883829,0.000008080221,0.90370387,0.00017383092,0.00030403002,0.00015131604],"about_ca_topic_score_codex":0.000010163895,"about_ca_topic_score_gemma":0.000034675686,"teacher_disagreement_score":0.049373064,"about_ca_system_score_codex":0.000010446477,"about_ca_system_score_gemma":0.00001974939,"threshold_uncertainty_score":0.48047563},"labels":[],"label_agreement":null},{"id":"W2051578380","doi":"10.1016/j.humpath.2007.05.026","title":"T-cell lymphoid aggregates in bone marrow after rituximab therapy for B-cell follicular lymphoma: a marker of therapeutic efficacy?","year":2007,"lang":"en","type":"article","venue":"Human Pathology","topic":"Lymphoma Diagnosis and Treatment","field":"Medicine","cited_by":25,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University Hospital","funders":"","keywords":"Bone marrow; Lymphoma; Pathology; CD20; CD5; Medicine; Follicular lymphoma; Rituximab; Biopsy; B cell; Antibody; Immunology","score_opus":0.01538806783348146,"score_gpt":0.27558775545592035,"score_spread":0.2601996876224389,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2051578380","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.96340036,0.03338929,0.00006400063,0.00016291265,0.000109046814,0.0012706472,0.000017526896,0.000040313767,0.0015458838],"genre_scores_gemma":[0.9963673,0.0006007508,0.0008955273,0.00096173544,0.00008524982,0.00035216458,0.000059086135,0.00006161232,0.0006165853],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.997998,0.00009293111,0.00060581986,0.0005154293,0.00019914802,0.00058867317],"domain_scores_gemma":[0.9987951,0.00026372005,0.00020322303,0.00052528374,0.0000939662,0.00011871609],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0005646548,0.00033091177,0.0007753021,0.00030171545,0.00006183588,0.000010420239,0.000114568255,0.00026342194,0.00016932534],"category_scores_gemma":[0.000016543598,0.00026458612,0.00034215403,0.00018061204,0.00017510206,0.000040525745,0.000038090104,0.000061613944,0.000036722606],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0093425065,0.043180577,0.70192033,0.00046460127,0.00029631736,0.006874153,0.002268782,0.0000018261798,0.1245672,0.00061271735,0.0006241687,0.10984681],"study_design_scores_gemma":[0.09321989,0.0025713681,0.7844466,0.00012721242,0.00022700125,0.00048984285,0.00013086262,0.000017120898,0.10938875,0.00057093543,0.008435673,0.0003747497],"about_ca_topic_score_codex":0.000044341967,"about_ca_topic_score_gemma":0.000038736453,"teacher_disagreement_score":0.10947206,"about_ca_system_score_codex":0.00019814855,"about_ca_system_score_gemma":0.000086947686,"threshold_uncertainty_score":0.9999806},"labels":[],"label_agreement":null},{"id":"W2051951707","doi":"10.1016/j.humpath.2007.07.002","title":"Trials of new germ cell immunohistochemical stains in 93 extragonadal and metastatic germ cell tumors","year":2007,"lang":"en","type":"article","venue":"Human Pathology","topic":"Testicular diseases and treatments","field":"Medicine","cited_by":100,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Manitoba Health; Health Sciences Centre; University of Manitoba","funders":"","keywords":"Seminoma; Embryonal carcinoma; Placental alkaline phosphatase; Biology; Pathology; Germ cell tumors; CD30; Yolk sac; Teratoma; Germ cell; Cancer research; Immunohistochemistry; Cellular differentiation; Medicine; Alkaline phosphatase; Embryo; Cell biology; Chemotherapy","score_opus":0.04917442070778779,"score_gpt":0.3603196962775882,"score_spread":0.31114527556980043,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2051951707","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99364686,0.004517317,0.00014427419,0.000031520416,0.000044598317,0.00043908102,0.000027205158,0.000019162124,0.0011299894],"genre_scores_gemma":[0.9976091,0.000027167636,0.0014158527,0.000083330415,0.00004440979,0.000009437635,0.00007198578,0.000021651174,0.0007171048],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9984472,0.00012388844,0.0007045971,0.00027551077,0.00014713123,0.00030169086],"domain_scores_gemma":[0.9989817,0.0002445777,0.00029336096,0.00025222727,0.000033198958,0.00019489157],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006491957,0.0001740477,0.00073129666,0.000169617,0.00003144756,0.0000045710563,0.000058116075,0.000078217265,0.00019412892],"category_scores_gemma":[0.00023159492,0.00014564862,0.00013974942,0.00008607473,0.0001388259,0.000023178722,0.00003846763,0.00014276241,0.0000072405146],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0011480612,0.003430783,0.17433636,0.00065553223,0.0001274439,0.016352052,0.0022179538,0.000003223862,0.7911953,0.0010346841,0.0006081948,0.008890436],"study_design_scores_gemma":[0.018272728,0.0015888431,0.92086583,0.00011119495,0.0009824377,0.0006471533,0.00056417787,0.000010607791,0.05379474,0.0023496936,0.0004714622,0.00034115478],"about_ca_topic_score_codex":0.00016341856,"about_ca_topic_score_gemma":0.000030966472,"teacher_disagreement_score":0.74652946,"about_ca_system_score_codex":0.00006823198,"about_ca_system_score_gemma":0.00016015176,"threshold_uncertainty_score":0.5939379},"labels":[],"label_agreement":null},{"id":"W2052903579","doi":"10.1016/j.humpath.2011.07.022","title":"Large cell neuroendocrine carcinoma arising in a sessile serrated adenoma: a novel observation","year":2011,"lang":"en","type":"article","venue":"Human Pathology","topic":"Neuroendocrine Tumor Research Advances","field":"Medicine","cited_by":5,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Calgary Laboratory Services; University of Calgary","funders":"","keywords":"Cytokeratin; Pathology; Synaptophysin; Immunohistochemistry; Tubular adenoma; Biology; Carcinoma; Adenoma; Microsatellite instability; Colonoscopy; Cancer; Colorectal cancer; Medicine","score_opus":0.09098200081346339,"score_gpt":0.3264949519606115,"score_spread":0.23551295114714813,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2052903579","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9930237,0.00016734087,0.00008452341,0.00019390268,0.00012193981,0.0005276356,0.000012986478,0.000118139316,0.0057498324],"genre_scores_gemma":[0.9962975,0.0000104118435,0.0010342014,0.0005607722,0.00007242442,0.00007185071,0.000056506327,0.000053241427,0.0018431334],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99791837,0.00014253712,0.00042023335,0.00053878274,0.00021581913,0.0007642496],"domain_scores_gemma":[0.9990993,0.000041005,0.0001254313,0.00046736683,0.00010752795,0.0001593683],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012118985,0.00022267197,0.0004056368,0.00037990755,0.000102998834,0.000012219451,0.00017780915,0.00001756953,0.000324206],"category_scores_gemma":[0.00014108288,0.00021881648,0.00006504272,0.00040585554,0.000107442,0.0001858052,0.00015591149,0.00056930067,0.00005648224],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00032525716,0.0019067317,0.52417934,0.00019813188,0.000006802951,0.06733412,0.00097465265,0.0000020618666,0.40381372,0.00072145945,0.00045755223,0.00008019412],"study_design_scores_gemma":[0.0070011746,0.0011874974,0.9479553,0.000039882354,0.000029009812,0.0066954987,0.0004396111,0.00019268766,0.034363035,0.0003824243,0.0014917213,0.00022214951],"about_ca_topic_score_codex":0.00012632465,"about_ca_topic_score_gemma":0.00019337668,"teacher_disagreement_score":0.42377597,"about_ca_system_score_codex":0.00006833891,"about_ca_system_score_gemma":0.000078831836,"threshold_uncertainty_score":0.89230776},"labels":[],"label_agreement":null},{"id":"W2053372939","doi":"10.1016/j.humpath.2006.11.020","title":"The MUC13 cell surface mucin is highly expressed by human colorectal carcinomas","year":2007,"lang":"en","type":"article","venue":"Human Pathology","topic":"Glycosylation and Glycoproteins Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":72,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"","keywords":"Mucin; Pathology; Staining; Biology; Stain; Colorectal cancer; Immunohistochemistry; Adenocarcinoma; Cancer; Medicine","score_opus":0.012156080179719893,"score_gpt":0.27975963893809974,"score_spread":0.2676035587583798,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2053372939","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98754084,0.0008268267,0.0002751694,0.00023771446,0.00010350015,0.00032899235,0.000036578873,0.000026052843,0.010624351],"genre_scores_gemma":[0.9844181,0.000042904696,0.00011965429,0.0002948404,0.00014495318,0.000020064745,0.00020482593,0.00003434101,0.014720348],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9982197,0.00017112821,0.0003048726,0.0004923786,0.00021244727,0.0005994635],"domain_scores_gemma":[0.9990471,0.000037598584,0.00010213393,0.0005456958,0.00013199494,0.00013548219],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006913524,0.00019768858,0.00016207263,0.00004319243,0.0006326652,0.00004655479,0.00041396904,0.00028368345,0.00015416724],"category_scores_gemma":[0.00003758805,0.00016290043,0.00009783951,0.000093916286,0.00031997304,0.000003808136,0.00019895022,0.00024009071,0.000081392],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007035477,0.00007354426,0.0027129564,0.000007571046,0.0000103397115,0.00004024476,0.00017652774,0.000002202329,0.9650655,0.00025168303,0.031410668,0.00017844452],"study_design_scores_gemma":[0.0008026462,0.00049212587,0.007483927,0.0000018287753,0.0000054086145,0.000018851239,0.000136252,0.000005956284,0.86740524,0.00012153267,0.12333916,0.00018706766],"about_ca_topic_score_codex":0.000075605276,"about_ca_topic_score_gemma":0.00028449093,"teacher_disagreement_score":0.09766022,"about_ca_system_score_codex":0.000024734496,"about_ca_system_score_gemma":0.000039638788,"threshold_uncertainty_score":0.6642887},"labels":[],"label_agreement":null},{"id":"W2053712011","doi":"10.1016/j.humpath.2007.01.029","title":"Ectopic hamartomatous thymoma: a case demonstrating skin adnexal differentiation with positivity for epithelial membrane antigen, androgen receptors, and BRST-2 by immunohistochemistry","year":2007,"lang":"en","type":"article","venue":"Human Pathology","topic":"Cancer and Skin Lesions","field":"Medicine","cited_by":20,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Mount Sinai Hospital; University Health Network; University of Toronto","funders":"","keywords":"Apocrine; Thymoma; Pathology; Immunohistochemistry; Biology; Medicine","score_opus":0.009434911402685266,"score_gpt":0.2809747027321072,"score_spread":0.2715397913294219,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2053712011","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99427974,0.000489584,0.0039376323,0.0000736858,0.000091844355,0.00045785177,0.00006851109,0.000058665308,0.0005424741],"genre_scores_gemma":[0.99812156,0.000018217372,0.0010784585,0.000079383106,0.00018036108,0.000033988643,0.00019845857,0.000025156693,0.00026438743],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9989499,0.00003963201,0.00026359627,0.00034107352,0.00010099468,0.0003048151],"domain_scores_gemma":[0.99940765,0.000100562276,0.00010753128,0.00020422516,0.00006660953,0.000113402086],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000250652,0.00017546688,0.00032115087,0.00006343482,0.0003377459,0.000017068813,0.000038753748,0.00016909275,0.00006727755],"category_scores_gemma":[0.00003480884,0.0001540799,0.000063615815,0.0000639557,0.00018218586,0.000043403666,0.000024987221,0.00017629853,0.0000010329534],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00043910646,0.00021230463,0.027464816,0.00016120094,0.000063015264,0.002975227,0.0009372847,2.011979e-7,0.9617241,0.000121580495,0.00030898832,0.0055921827],"study_design_scores_gemma":[0.015390091,0.002803776,0.14599703,0.0002852086,0.0006028959,0.14562483,0.0010867463,0.00013561048,0.6859591,0.00027746282,0.0009444333,0.00089283544],"about_ca_topic_score_codex":0.00008301971,"about_ca_topic_score_gemma":0.00022436751,"teacher_disagreement_score":0.27576503,"about_ca_system_score_codex":0.0000625406,"about_ca_system_score_gemma":0.000047687656,"threshold_uncertainty_score":0.6283196},"labels":[],"label_agreement":null},{"id":"W2054449513","doi":"10.1016/j.humpath.2010.07.018","title":"Mucinous tubular and spindle cell carcinoma of kidney without sarcomatoid change showing metastases to liver and retroperitoneal lymph node","year":2010,"lang":"en","type":"article","venue":"Human Pathology","topic":"Urinary and Genital Oncology Studies","field":"Medicine","cited_by":50,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia; BC Cancer Agency; Interior Health; Credit Valley Hospital; Hamilton Health Sciences","funders":"","keywords":"Pathology; Stroma; Metastasis; Lymph node; Sarcoma; Medicine; Biology; Immunohistochemistry; Cancer; Internal medicine","score_opus":0.0381842326309221,"score_gpt":0.2819409597930609,"score_spread":0.24375672716213878,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2054449513","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9957057,0.0020093285,0.0000040139066,0.00058104465,0.00015080582,0.00032133303,0.000033002474,0.000025860327,0.0011689026],"genre_scores_gemma":[0.99572206,0.00004331698,0.0020388935,0.0016231787,0.00018023484,0.000035882957,0.000014718429,0.000021328922,0.00032041915],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9989906,0.000072826486,0.00021825156,0.00035257664,0.00008869612,0.00027707292],"domain_scores_gemma":[0.99931246,0.000031071457,0.00006324874,0.00026196308,0.00006150516,0.00026976576],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00018962179,0.00018347938,0.0005274693,0.0001445903,0.0001690057,0.0000054913844,0.000065101216,0.00013972107,0.000060233113],"category_scores_gemma":[0.000090417925,0.00015745866,0.000045901397,0.000063696825,0.00042060277,0.000060560847,0.00021928243,0.00020098299,0.000010095913],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015506666,0.0002588561,0.6972305,0.00021884088,0.000034550812,0.0017092533,0.0034749357,2.9878798e-8,0.2959667,0.00015184024,0.00025556405,0.00054386735],"study_design_scores_gemma":[0.0020986723,0.0024410912,0.9645973,0.000031797364,0.00025011235,0.002990619,0.00044581143,0.000008819052,0.024236068,0.00003352722,0.002655206,0.00021096788],"about_ca_topic_score_codex":0.000101006444,"about_ca_topic_score_gemma":0.000050087154,"teacher_disagreement_score":0.27173063,"about_ca_system_score_codex":0.000011829936,"about_ca_system_score_gemma":0.000034628527,"threshold_uncertainty_score":0.64209783},"labels":[],"label_agreement":null},{"id":"W2055608100","doi":"10.1016/j.humpath.2013.12.008","title":"Support for p63 expression as an adverse prognostic marker in Merkel cell carcinoma: report on a Canadian cohort","year":2014,"lang":"en","type":"article","venue":"Human Pathology","topic":"Polyomavirus and related diseases","field":"Medicine","cited_by":45,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Horizon Health Network; Capital District Health Authority; Saint John Regional Hospital; Dalhousie University","funders":"Coordenação de Aperfeiçoamento de Pessoal de Nível Superior","keywords":"Merkel cell carcinoma; Medicine; Hazard ratio; Cohort; Internal medicine; Oncology; Merkel cell; Proportional hazards model; Univariate analysis; Immunohistochemistry; Cancer; Stage (stratigraphy); Multivariate analysis; Carcinoma; Pathology; Biology; Confidence interval","score_opus":0.014331874541202995,"score_gpt":0.28217515711858443,"score_spread":0.26784328257738144,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2055608100","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9602445,0.000052293402,0.000007961425,0.00009796047,0.00019110418,0.00089519995,0.000024158453,0.000039902683,0.038446933],"genre_scores_gemma":[0.99352497,0.0000032655778,0.00012196764,0.0008688611,0.00012930506,0.0001926582,0.0004668329,0.000039616276,0.0046525495],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9984361,0.00010518702,0.00034887207,0.0004951967,0.00013566532,0.00047900525],"domain_scores_gemma":[0.9987812,0.000052913372,0.000104324135,0.0004900565,0.000058390786,0.0005130856],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00039585165,0.00018253569,0.00033095156,0.0002910341,0.00012742539,0.0000055066453,0.000086846834,0.00026524623,0.00040570818],"category_scores_gemma":[0.00021569962,0.00015402844,0.00009321235,0.000067857785,0.000099531164,0.000043793396,0.000020519099,0.00021031186,0.000080463586],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002907165,0.00050729804,0.974836,0.0000826319,0.000010621527,0.0117246965,0.00024864916,0.0000039308525,0.007777638,0.00030306354,0.0039236443,0.000291141],"study_design_scores_gemma":[0.002427737,0.0015055408,0.9842635,0.00006275195,0.00015423434,0.0008768369,0.00007435208,0.00007029304,0.0014101532,0.00028393185,0.008666666,0.00020399358],"about_ca_topic_score_codex":0.0051623923,"about_ca_topic_score_gemma":0.0066155265,"teacher_disagreement_score":0.033794384,"about_ca_system_score_codex":0.00009725928,"about_ca_system_score_gemma":0.00035217984,"threshold_uncertainty_score":0.7804027},"labels":[],"label_agreement":null},{"id":"W2059068580","doi":"10.1016/j.humpath.2013.10.012","title":"The prognostic role of ERG immunopositivity in prostatic acinar adenocarcinoma: a study including 454 cases and review of the literature","year":2013,"lang":"en","type":"review","venue":"Human Pathology","topic":"Prostate Cancer Treatment and Research","field":"Medicine","cited_by":37,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University Health Centre; McGill University","funders":"","keywords":"Erg; TMPRSS2; Prostate cancer; Prostate; Medicine; Immunostaining; Tissue microarray; Adenocarcinoma; Clinical significance; Cancer; Pathology; Prostate-specific antigen; Transurethral resection of the prostate; Immunohistochemistry; Oncology; Internal medicine; Ophthalmology","score_opus":0.07048881949045828,"score_gpt":0.4015588700141579,"score_spread":0.33107005052369964,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2059068580","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.110984206,0.88223016,1.860753e-8,0.00006579459,0.000035556608,0.0065772077,0.000036931553,0.000005924423,0.00006418483],"genre_scores_gemma":[0.08068282,0.91798264,0.000006772585,0.000015550497,0.000027225586,0.00095665164,0.00004696124,0.000026998605,0.00025439193],"study_design_codex":"systematic_review","study_design_gemma":"systematic_review","domain_scores_codex":[0.99723834,0.0011771872,0.0007105579,0.00034418696,0.00023925908,0.00029047322],"domain_scores_gemma":[0.9980155,0.0006785755,0.00046122732,0.0006281407,0.00017337965,0.00004315097],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00083651074,0.00029846505,0.0016609726,0.00014664557,0.0001718324,0.000016767963,0.00023264695,0.00015204526,0.0000112583775],"category_scores_gemma":[0.0005297512,0.00013258202,0.00019936336,0.00044695326,0.00040915067,0.000038920054,0.00036924073,0.00065594417,0.0000020389714],"study_design_candidate":"systematic_review","study_design_consensus":"systematic_review","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001162914,0.0017254036,0.104520984,0.478833,0.00065561035,0.0025223808,0.007254224,1.1410834e-8,0.00022591809,0.00017995617,0.00020344066,0.4037628],"study_design_scores_gemma":[0.0035758344,0.006920815,0.17590606,0.7728225,0.005885577,0.00491328,0.0016608078,7.131684e-7,0.00005342786,0.00038091704,0.027301386,0.0005786913],"about_ca_topic_score_codex":0.000036326674,"about_ca_topic_score_gemma":0.00003183034,"teacher_disagreement_score":0.4031841,"about_ca_system_score_codex":0.00010729565,"about_ca_system_score_gemma":0.00028600378,"threshold_uncertainty_score":0.5406538},"labels":[],"label_agreement":null},{"id":"W2059168948","doi":"10.1016/j.humpath.2006.03.002","title":"Role of the mitogen-activated protein kinase and phosphoinositide 3-kinase/AKT pathways downstream molecules, phosphorylated extracellular signal–regulated kinase, and phosphorylated AKT in colorectal cancer—A tissue microarray–based approach☆","year":2006,"lang":"en","type":"article","venue":"Human Pathology","topic":"Genetic factors in colorectal cancer","field":"Medicine","cited_by":43,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"","keywords":"Protein kinase B; Kinase; Cancer research; Biology; Tissue microarray; Protein kinase A; PI3K/AKT/mTOR pathway; Phosphoinositide 3-kinase; Pathology; Signal transduction; Immunohistochemistry; Medicine; Cell biology; Immunology","score_opus":0.00854092150895384,"score_gpt":0.2195303957637523,"score_spread":0.21098947425479847,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2059168948","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97858256,0.017365897,0.000046525704,0.00008259399,0.00014194679,0.0030320094,0.00018222997,0.00014169017,0.00042451578],"genre_scores_gemma":[0.99776006,0.000040033538,0.00088513084,0.00008876381,0.000057293153,0.0004996733,0.0002696836,0.00013536592,0.0002640132],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9959365,0.00042137603,0.0010168699,0.0012466396,0.00046573352,0.00091284147],"domain_scores_gemma":[0.99820733,0.000088473396,0.00053679466,0.0006505695,0.00027775983,0.00023907388],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0003594222,0.00076534407,0.0011215996,0.00033118756,0.00026536168,0.000039757528,0.00032103335,0.00075220584,0.0002515663],"category_scores_gemma":[0.000065506545,0.0006667701,0.00015914014,0.00089690945,0.0012229533,0.000073372285,0.00020108846,0.0007934957,0.0000034636685],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0014832471,0.00068284635,0.01588487,0.00023150843,0.00007504862,0.00039099585,0.000644285,0.000426053,0.97736454,0.00013034008,0.00011794619,0.0025683038],"study_design_scores_gemma":[0.0051318016,0.001172078,0.074259266,0.0003449171,0.0001843817,0.0001711606,0.00020841713,0.0010494008,0.91630286,0.00032285193,0.00026772323,0.0005851315],"about_ca_topic_score_codex":0.0036494809,"about_ca_topic_score_gemma":0.00064469903,"teacher_disagreement_score":0.061061684,"about_ca_system_score_codex":0.0003589411,"about_ca_system_score_gemma":0.00038256007,"threshold_uncertainty_score":0.99957836},"labels":[],"label_agreement":null},{"id":"W2059242372","doi":"10.1016/j.humpath.2007.10.001","title":"Relationship between tumor grade and computed architectural complexity in breast cancer specimens","year":2008,"lang":"en","type":"article","venue":"Human Pathology","topic":"AI in cancer detection","field":"Computer Science","cited_by":64,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"Breast cancer; Cancer; Medicine; Oncology; Internal medicine","score_opus":0.13730880661903144,"score_gpt":0.31945282944948206,"score_spread":0.1821440228304506,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2059242372","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98141617,0.00006866587,0.016602308,0.0012690168,0.00018306165,0.00014183551,0.000015362686,0.00013653436,0.00016705332],"genre_scores_gemma":[0.99351364,0.0000019257175,0.006031214,0.0001957272,0.00019460282,0.000018601675,0.000005587741,0.000009410155,0.00002929162],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99871075,0.00020775334,0.00024737712,0.00042514195,0.0001263294,0.00028267608],"domain_scores_gemma":[0.9993422,0.00014966357,0.0000991297,0.00031017532,0.000028271714,0.000070548114],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015471087,0.00013512708,0.00022253786,0.00020975167,0.0002797283,0.000020927908,0.00031085857,0.00006219568,0.000015830212],"category_scores_gemma":[0.000009328807,0.00013988565,0.000029383758,0.00029878542,0.0003784572,0.0001495458,0.00019905098,0.00033844318,0.000012150248],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000045023958,0.000020237549,0.988677,0.000009255289,0.0000032398702,0.00015387389,0.0012766427,0.00007383954,0.0003658685,0.008491844,0.00013494209,0.0007887507],"study_design_scores_gemma":[0.000457729,0.000049306018,0.97972333,0.000010150469,0.000003069573,0.0015384036,0.0000057326884,0.001049417,0.00008134398,0.016893739,0.00004146507,0.00014629724],"about_ca_topic_score_codex":0.00021676283,"about_ca_topic_score_gemma":0.00041669855,"teacher_disagreement_score":0.012097477,"about_ca_system_score_codex":0.00012236327,"about_ca_system_score_gemma":0.000036759775,"threshold_uncertainty_score":0.5704372},"labels":[],"label_agreement":null},{"id":"W2059345978","doi":"10.1016/j.humpath.2013.09.020","title":"Well-differentiated hepatocellular neoplasm of uncertain malignant potential: proposal for a new diagnostic category","year":2013,"lang":"en","type":"letter","venue":"Human Pathology","topic":"Liver Disease Diagnosis and Treatment","field":"Medicine","cited_by":65,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University; Hospital for Sick Children; Queen Elizabeth II Health Sciences Centre; University of Toronto","funders":"","keywords":"Neoplasm; Hepatocellular carcinoma; Pathology; Medicine; Set (abstract data type); Internal medicine; Computer science","score_opus":0.02541621698558187,"score_gpt":0.263597274704627,"score_spread":0.23818105771904513,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2059345978","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.76850647,0.0061191265,0.0005721402,0.20825945,0.0017879602,0.01281844,0.00082341064,0.00032876487,0.0007842754],"genre_scores_gemma":[0.7718846,0.0007264099,0.001753017,0.15854435,0.0059890077,0.004212334,0.028782753,0.0006101804,0.027497323],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99709594,0.00019629464,0.0007518358,0.000882388,0.00035290848,0.0007206328],"domain_scores_gemma":[0.99793726,0.00029026298,0.0004831236,0.0007891413,0.00026669932,0.00023349105],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00009583449,0.0006327392,0.0013417945,0.0003112472,0.000112479516,0.000028459925,0.00024824412,0.0010132662,0.0014205783],"category_scores_gemma":[0.00008695066,0.0004994025,0.0006072005,0.0000882282,0.00022266284,0.00004103739,0.00010236953,0.000607222,0.00026092856],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007607018,0.0008116633,0.008391293,0.0016770411,0.0010098187,0.011940957,0.00019935006,0.0000029199446,0.0018972954,0.0004406683,0.9732789,0.00027406812],"study_design_scores_gemma":[0.076183856,0.02542923,0.16885954,0.007961371,0.061750628,0.005682753,0.00042432643,0.0012377184,0.036749117,0.06078103,0.5470471,0.007893368],"about_ca_topic_score_codex":0.0006232071,"about_ca_topic_score_gemma":0.000020283347,"teacher_disagreement_score":0.4262318,"about_ca_system_score_codex":0.00012402656,"about_ca_system_score_gemma":0.0006079373,"threshold_uncertainty_score":0.9997458},"labels":[],"label_agreement":null},{"id":"W2061231007","doi":"10.1016/j.humpath.2007.04.014","title":"Enhanced B-Raf protein expression is independent of V600E mutant status in thyroid carcinomas","year":2007,"lang":"en","type":"article","venue":"Human Pathology","topic":"Thyroid Cancer Diagnosis and Treatment","field":"Medicine","cited_by":42,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University Health Network; Ontario Institute for Cancer Research","funders":"","keywords":"Thyroid carcinoma; Cancer research; Thyroid; Carcinogenesis; Follicular cell; Immunohistochemistry; V600E; Biology; Pathology; Adenoma; Mutation; Internal medicine; Medicine; Endocrinology; Cancer; Gene","score_opus":0.019579670502253833,"score_gpt":0.2982169432398275,"score_spread":0.27863727273757366,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2061231007","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9946011,0.0014368949,0.00012569211,0.00009910943,0.00007646136,0.0007742477,0.000016631042,0.000027976996,0.0028419262],"genre_scores_gemma":[0.99895185,0.000071003575,0.0003101798,0.00018397189,0.00006567767,0.00012249967,0.000023198783,0.000024703682,0.00024691614],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9983532,0.000058494596,0.00048155832,0.00039734706,0.00024528432,0.00046414192],"domain_scores_gemma":[0.99918616,0.000031851025,0.00017339677,0.0004108622,0.00006572077,0.00013202534],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00027466676,0.00018323702,0.00044780882,0.00023257917,0.00004275433,0.0000036359145,0.00007797707,0.00016542952,0.00029858586],"category_scores_gemma":[0.000023819313,0.00015216625,0.000088989014,0.00013194127,0.00011175202,0.000036622412,0.00006523254,0.00021617333,0.000020521638],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00030569904,0.00068968144,0.054581527,0.00006144161,0.000016229951,0.0009809325,0.00270899,0.0000010868498,0.9384923,0.0003868281,0.00008470039,0.0016905832],"study_design_scores_gemma":[0.003054178,0.00091007893,0.3906604,0.00011798414,0.000020744383,0.000025310525,0.0002568332,5.67917e-7,0.60448354,0.00021913242,0.00016583053,0.00008538953],"about_ca_topic_score_codex":0.0001955561,"about_ca_topic_score_gemma":0.0004242291,"teacher_disagreement_score":0.33607888,"about_ca_system_score_codex":0.00021595012,"about_ca_system_score_gemma":0.000075583695,"threshold_uncertainty_score":0.62051594},"labels":[],"label_agreement":null},{"id":"W2063225228","doi":"10.1016/j.humpath.2012.11.004","title":"Somatic mutations of the mitochondrial genome in Chinese patients with Ewing sarcoma","year":2013,"lang":"en","type":"article","venue":"Human Pathology","topic":"Sarcoma Diagnosis and Treatment","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Princess Margaret Cancer Centre; University Health Network; Ontario Institute for Cancer Research; University of Toronto","funders":"Tianjin Medical University; Tianjin University","keywords":"Mitochondrial DNA; Somatic cell; Biology; Genetics; Gene; Missense mutation; Mutation; Coding region; Germline mutation; Molecular biology","score_opus":0.010581140232791993,"score_gpt":0.250123739649163,"score_spread":0.23954259941637102,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2063225228","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.998522,0.00007132555,0.0000049408773,0.00021072668,0.00006532294,0.00069402927,0.0000046638534,0.000010075817,0.00041694578],"genre_scores_gemma":[0.9990618,9.586629e-7,0.000558207,0.000115532435,0.000033131222,0.00015021008,0.000030701467,0.000011931925,0.000037506165],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9993469,0.000059134938,0.00021066627,0.00013450724,0.00010968709,0.00013911273],"domain_scores_gemma":[0.9995279,0.000052084077,0.0000821094,0.000260628,0.000046128782,0.000031174266],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000024961313,0.00009283797,0.00022037243,0.00008261533,0.00005349843,0.0000047678554,0.000065121014,0.000041165866,0.0002005898],"category_scores_gemma":[0.000032500273,0.00004991058,0.000050692954,0.00010608811,0.000090685644,0.000035774086,0.00003203919,0.00007778513,0.00003431349],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000099608515,0.000660004,0.99371874,0.00001753488,0.000019643328,0.000029628749,0.00091306714,0.0000042683555,0.0041269925,0.00006790245,0.000009466065,0.00042276154],"study_design_scores_gemma":[0.003073369,0.00021561603,0.99545693,0.000036579833,0.00004002561,0.00002154655,0.000054747834,0.0000058141977,0.00013278186,0.00090815965,0.000007913374,0.000046494402],"about_ca_topic_score_codex":0.00006173646,"about_ca_topic_score_gemma":0.00008259965,"teacher_disagreement_score":0.003994211,"about_ca_system_score_codex":0.000035060933,"about_ca_system_score_gemma":0.000018620784,"threshold_uncertainty_score":0.21963176},"labels":[],"label_agreement":null},{"id":"W2064118340","doi":"10.1053/hp.2000.6536","title":"Pattern of distribution of intraductal and infiltrating ductal carcinoma: A three-dimensional study using serial coronal giant sections of the breast","year":2000,"lang":"en","type":"article","venue":"Human Pathology","topic":"Breast Lesions and Carcinomas","field":"Medicine","cited_by":53,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ottawa Hospital","funders":"","keywords":"Pathology; Atypia; Ductal carcinoma; Carcinoma; Medicine; Frozen section procedure; Coronal plane; Nuclear atypia; Hyperplasia; Quadrant (abdomen); Breast cancer; Anatomy; Immunohistochemistry; Cancer; Internal medicine","score_opus":0.02144068419720021,"score_gpt":0.25646064207295,"score_spread":0.23501995787574978,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2064118340","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9992626,0.000050048056,0.000030650684,0.000045802655,0.00009343541,0.00028182223,0.00019605526,0.0000062997374,0.000033297143],"genre_scores_gemma":[0.9997639,3.9112203e-7,0.000053899323,0.000009317042,0.00011327156,0.00000409684,0.000036472342,0.000009097399,0.000009551505],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9990337,0.00010080471,0.0003796297,0.00018316746,0.00016628526,0.00013641547],"domain_scores_gemma":[0.9994658,0.00002098555,0.00015377178,0.00021276601,0.00010629556,0.000040342693],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014795971,0.00010868133,0.00030510433,0.000041027924,0.000118298056,0.0000023358532,0.00005459253,0.00007225829,0.00019291055],"category_scores_gemma":[0.0000083569175,0.00008084402,0.00007605248,0.00011071402,0.00036982945,0.000033589113,0.000056958863,0.00015365712,3.4356847e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00018539221,0.0006834043,0.7522022,0.00005259556,0.000039682833,0.000053789496,0.00096536,0.000030769035,0.24374501,0.00010065519,0.000008802708,0.001932296],"study_design_scores_gemma":[0.001493289,0.00059733464,0.9882661,0.000048343423,0.00013787355,0.0069079995,0.0004366783,0.00033513506,0.0016708872,0.00004525134,5.8882443e-7,0.000060497467],"about_ca_topic_score_codex":0.0006500849,"about_ca_topic_score_gemma":0.0002615892,"teacher_disagreement_score":0.24207413,"about_ca_system_score_codex":0.000023999793,"about_ca_system_score_gemma":0.000081247366,"threshold_uncertainty_score":0.32967237},"labels":[],"label_agreement":null},{"id":"W2066811261","doi":"10.1016/j.humpath.2008.10.005","title":"Oncocytic rectal adenocarcinomas","year":2009,"lang":"en","type":"article","venue":"Human Pathology","topic":"Colorectal and Anal Carcinomas","field":"Medicine","cited_by":8,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University Health Network; University of Toronto","funders":"","keywords":"Eosinophilic; Adenocarcinoma; Pathology; Rectum; Medicine; Biology; Internal medicine; Cancer","score_opus":0.02577798063397944,"score_gpt":0.30039374845560113,"score_spread":0.27461576782162167,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2066811261","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.92643446,0.00043908638,0.000013776324,0.0010349088,0.00009084214,0.0001345231,0.0000014520378,0.00011108865,0.07173989],"genre_scores_gemma":[0.9934752,0.000006034112,0.0001492452,0.0019106403,0.00035737484,0.0000054232987,0.000022202103,0.000011281457,0.0040626233],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9990963,0.000040720228,0.00018941941,0.0002744438,0.00011650304,0.00028260978],"domain_scores_gemma":[0.99953574,0.000016648453,0.000041331605,0.00023137474,0.00004442277,0.00013049616],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009753391,0.0001311531,0.00028747445,0.00011584912,0.000094811614,0.0000074591694,0.00007362124,0.00010915844,0.00040729492],"category_scores_gemma":[0.000034897977,0.00011250448,0.00012255636,0.000117271724,0.000088510016,0.000031428597,0.000025760388,0.0002306327,0.00023639727],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00083194696,0.0009910502,0.099772975,0.00009688363,0.00005660342,0.023496453,0.0023979617,0.0000015560064,0.7794631,0.037546583,0.011852097,0.043492768],"study_design_scores_gemma":[0.0013518505,0.003675668,0.9795433,0.000025926469,0.00007752371,0.0037670282,0.00007919692,0.000020548536,0.0037405547,0.004839466,0.00270021,0.00017866922],"about_ca_topic_score_codex":0.0000054085212,"about_ca_topic_score_gemma":0.0000118033495,"teacher_disagreement_score":0.8797704,"about_ca_system_score_codex":0.000064108346,"about_ca_system_score_gemma":0.00004358514,"threshold_uncertainty_score":0.45877996},"labels":[],"label_agreement":null},{"id":"W2067294558","doi":"10.1016/j.humpath.2006.07.014","title":"Temozolomide therapy in a man with an aggressive prolactin-secreting pituitary neoplasm: morphological findings","year":2006,"lang":"en","type":"article","venue":"Human Pathology","topic":"Pituitary Gland Disorders and Treatments","field":"Medicine","cited_by":110,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; St. Michael's Hospital","funders":"Jarislowsky Foundation","keywords":"Temozolomide; Immunohistochemistry; Medicine; Pathology; Prolactin; Neoplasm; Infiltration (HVAC); Necrosis; Pituitary tumors; Connective tissue; Internal medicine; Chemotherapy; Hormone","score_opus":0.018884356643005983,"score_gpt":0.2726744470176289,"score_spread":0.2537900903746229,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2067294558","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9941157,0.00044409625,0.000015627933,0.00025604366,0.000032434833,0.00054654334,0.0000067844635,0.00009230557,0.0044904626],"genre_scores_gemma":[0.99774367,0.000033785233,0.0008359601,0.0006373487,0.00008580193,0.00009652193,0.00025789478,0.000030428811,0.00027856833],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9984984,0.00011119721,0.00027725892,0.0005067167,0.0001443634,0.0004620568],"domain_scores_gemma":[0.9994195,0.00004153187,0.00012652103,0.00028352987,0.000034742614,0.00009418396],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014298213,0.00025297358,0.00043197494,0.00017541973,0.00014993624,0.000014024014,0.00009620015,0.00017992815,0.00017826282],"category_scores_gemma":[0.000018458673,0.00017229261,0.000058428213,0.00012372332,0.00017355672,0.00010033388,0.00002920553,0.0002833778,0.00003134532],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0015597284,0.0011224624,0.96359295,0.000014324781,0.000027456275,0.026324354,0.00043204517,0.000008838313,0.0050580082,0.00027679306,0.00016993572,0.0014130881],"study_design_scores_gemma":[0.008640168,0.0043220744,0.9799541,0.00006008839,0.000035082303,0.0038727159,0.00024846083,0.000023801684,0.0004537959,0.0020414467,0.00012569745,0.00022257035],"about_ca_topic_score_codex":0.00023570564,"about_ca_topic_score_gemma":0.00044178643,"teacher_disagreement_score":0.02245164,"about_ca_system_score_codex":0.00005019343,"about_ca_system_score_gemma":0.00003990494,"threshold_uncertainty_score":0.70258886},"labels":[],"label_agreement":null},{"id":"W2069075526","doi":"10.1016/j.humpath.2010.05.001","title":"Matrix metalloproteinase 9 is associated with Gleason score in prostate cancer but not with prognosis","year":2010,"lang":"en","type":"article","venue":"Human Pathology","topic":"Protease and Inhibitor Mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":27,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval; Centre hospitalier universitaire de Québec","funders":"Canadian Institutes of Health Research","keywords":"Prostate cancer; Stromal cell; Medicine; Cancer; PCA3; Immunostaining; Prostate; Immunohistochemistry; Oncology; Pathology; Cancer research; Internal medicine","score_opus":0.011580733965958488,"score_gpt":0.2547366286566327,"score_spread":0.24315589469067422,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2069075526","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9984689,0.00022081293,0.000024942083,0.00017835997,0.00006392556,0.0007548585,0.00007238498,0.000028077311,0.00018776195],"genre_scores_gemma":[0.99688166,0.000022839178,0.00060587126,0.00042110085,0.000107158354,0.0006503829,0.00012743489,0.000046236848,0.0011373414],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9986522,0.00007595162,0.00019195265,0.00053478975,0.00014462453,0.00040047022],"domain_scores_gemma":[0.99931544,0.0000041666112,0.00014933266,0.00033098427,0.000116182884,0.000083904],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00020652404,0.00023402867,0.00025042848,0.00007095356,0.000101495876,0.000023513374,0.00016624657,0.00023409705,0.00009362457],"category_scores_gemma":[0.000034877965,0.00018009004,0.00004789929,0.00011724423,0.00015599596,0.000008591352,0.00007464711,0.00030645373,0.000007749694],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00024382079,0.00014476609,0.013539502,0.000017890678,0.000043570093,0.0002844331,0.00010252259,0.0000022802749,0.98506653,0.0001704169,0.00014279877,0.00024144982],"study_design_scores_gemma":[0.0015095337,0.0012847744,0.0061844024,0.00006096571,0.000040660474,0.00008717877,0.00003144664,0.0000069798,0.98972386,0.00012132176,0.00064978655,0.00029911363],"about_ca_topic_score_codex":0.00012062263,"about_ca_topic_score_gemma":0.0021343376,"teacher_disagreement_score":0.0073551,"about_ca_system_score_codex":0.000017048056,"about_ca_system_score_gemma":0.000113753435,"threshold_uncertainty_score":0.73438585},"labels":[],"label_agreement":null},{"id":"W2069349549","doi":"10.1016/j.humpath.2005.04.003","title":"Influence of a problem-based learning curriculum on the selection of pathology as a career: evidence from the Canadian match of 1993-2004","year":2005,"lang":"en","type":"article","venue":"Human Pathology","topic":"Innovations in Medical Education","field":"Medicine","cited_by":12,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of British Columbia; Children's & Women's Health Centre of British Columbia","funders":"","keywords":"Curriculum; Problem-based learning; Medical school; Medical education; Medicine; United States Medical Licensing Examination; Psychology; Family medicine; Pathology; Pedagogy","score_opus":0.0226172715486922,"score_gpt":0.310946674915255,"score_spread":0.2883294033665628,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2069349549","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9929459,0.00011966092,0.00006104815,0.006051218,0.000051254705,0.00042499127,0.0000048122743,0.000015087845,0.0003259945],"genre_scores_gemma":[0.9967025,0.0000070594447,0.0013356172,0.0016921648,0.00009901146,0.00007029969,0.000026299766,0.000012609731,0.000054459673],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9985149,0.0002958913,0.0004891169,0.00021314384,0.00027328363,0.00021368543],"domain_scores_gemma":[0.99842995,0.0002370987,0.00037232673,0.00036364558,0.0005584875,0.000038516104],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00097295846,0.000110426736,0.00026459733,0.00018683073,0.00016942374,0.0000033761191,0.00021634002,0.00017120557,0.0002335984],"category_scores_gemma":[0.0021919385,0.00007264507,0.00004961145,0.00049633597,0.00050723925,0.00003880096,0.00002069686,0.0005481601,0.000016860293],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001250767,0.000536684,0.8093839,0.00023682811,0.000068060224,0.000057368805,0.015180562,0.010904784,0.13882165,0.013832489,0.0035601903,0.007292412],"study_design_scores_gemma":[0.0012197813,0.0023615279,0.958472,0.0014900176,0.00021721533,0.00025752443,0.0015523947,0.0017024284,0.0284684,0.0014906237,0.0025446226,0.00022344994],"about_ca_topic_score_codex":0.04106312,"about_ca_topic_score_gemma":0.034200016,"teacher_disagreement_score":0.14908811,"about_ca_system_score_codex":0.00017685218,"about_ca_system_score_gemma":0.00068123813,"threshold_uncertainty_score":0.9834233},"labels":[],"label_agreement":null},{"id":"W2069990859","doi":"10.1016/j.humpath.2011.01.019","title":"Activation of the phosphatidylinositol 3′-kinase/AKT pathway in neuroblastoma and its regulation by thioredoxin 1","year":2011,"lang":"en","type":"article","venue":"Human Pathology","topic":"Redox biology and oxidative stress","field":"Biochemistry, Genetics and Molecular Biology","cited_by":25,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Centre Hospitalier Universitaire Sainte-Justine; Université de Montréal","funders":"","keywords":"Phosphatidylinositol; Protein kinase B; Kinase; PI3K/AKT/mTOR pathway; Cancer research; Cell biology; Signal transduction; Chemistry; Biology","score_opus":0.015059118931899509,"score_gpt":0.230760441974578,"score_spread":0.2157013230426785,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2069990859","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9984145,0.00023148525,0.00006504158,0.00003771394,0.00006421472,0.00017114439,0.000014340825,0.0000047434055,0.0009967937],"genre_scores_gemma":[0.9995014,0.000019899851,0.000043261192,0.000101600905,0.00002552846,0.000015410735,0.000047594585,0.000008754643,0.00023656515],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9991941,0.0001977003,0.00018455838,0.00025083736,0.000042036085,0.00013076405],"domain_scores_gemma":[0.99959415,0.000010236009,0.00013592697,0.00019946336,0.00004079158,0.000019454315],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00011283925,0.000103120605,0.000115574694,0.00003175143,0.000066014465,0.0000022019367,0.000131089,0.00019883474,0.000022336713],"category_scores_gemma":[0.000048802918,0.000080488295,0.000031814427,0.000059769485,0.00016535968,0.0000057943967,0.000092597016,0.00009306629,0.0000012073007],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006314852,0.000051731986,0.018463632,0.000008555507,0.000005663215,0.0000018864847,0.00023207796,0.0000016953362,0.97917914,0.0012965788,0.00012622331,0.00056964444],"study_design_scores_gemma":[0.00027156397,0.00018332346,0.30388418,0.000008784624,0.0000024126207,0.000007186876,0.000024130859,0.000005470376,0.6949647,0.0003296878,0.00026094573,0.000057620884],"about_ca_topic_score_codex":0.000008440159,"about_ca_topic_score_gemma":0.000029166571,"teacher_disagreement_score":0.28542054,"about_ca_system_score_codex":0.000004294457,"about_ca_system_score_gemma":0.0000139690865,"threshold_uncertainty_score":0.32822174},"labels":[],"label_agreement":null},{"id":"W2072506007","doi":"10.1016/j.humpath.2011.01.023","title":"Low-grade fibromyxoid sarcoma of the perineum with heterotopic ossification: case report and review of the literature","year":2011,"lang":"en","type":"review","venue":"Human Pathology","topic":"Sarcoma Diagnosis and Treatment","field":"Medicine","cited_by":27,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Surrey Memorial Hospital; BC Cancer Agency; University of British Columbia; Vancouver General Hospital","funders":"","keywords":"Pathology; Sarcoma; Ossification; Biopsy; Perineum; Heterotopic ossification; Medicine; Synovial sarcoma; Biology; Anatomy","score_opus":0.05659736614573264,"score_gpt":0.3351191415211524,"score_spread":0.2785217753754198,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2072506007","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.014213805,0.98333484,1.9881156e-7,0.00016765854,0.00007737642,0.0018719448,0.000035390647,0.000008402163,0.00029040143],"genre_scores_gemma":[0.005680053,0.9933099,0.00007143121,0.000119748096,0.000059556984,0.00035470867,0.000044803557,0.00002914189,0.00033061847],"study_design_codex":"systematic_review","study_design_gemma":"case_report","domain_scores_codex":[0.99838793,0.00029419412,0.00068590976,0.0003629063,0.00013077048,0.00013829119],"domain_scores_gemma":[0.99749917,0.00005698036,0.00084204844,0.0014509493,0.00010497487,0.000045874487],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00018033535,0.00028910072,0.0014141373,0.000055542136,0.00008503939,0.0000053276744,0.00017005896,0.00018304925,0.00006434071],"category_scores_gemma":[0.000050597282,0.000119917335,0.0004083162,0.0002057072,0.00033392693,0.000012295346,0.00011651701,0.0003103289,0.00000128735],"study_design_candidate":"systematic_review","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000018762868,0.0014195634,0.0139816785,0.56966215,0.000696957,0.09708371,0.0011021857,8.037577e-9,0.000021410353,0.0018488716,0.0010078409,0.31315684],"study_design_scores_gemma":[0.0003921788,0.00026166433,0.010225057,0.18468772,0.0021720503,0.47910565,0.000008929559,1.7650168e-8,0.000042219974,0.00002781126,0.32293406,0.00014262738],"about_ca_topic_score_codex":0.0000091066995,"about_ca_topic_score_gemma":0.000008758495,"teacher_disagreement_score":0.38497445,"about_ca_system_score_codex":0.000030204967,"about_ca_system_score_gemma":0.00010392729,"threshold_uncertainty_score":0.4890087},"labels":[],"label_agreement":null},{"id":"W2074314856","doi":"10.1016/j.humpath.2011.02.005","title":"Parakeratosis in skin is associated with loss of inhibitor of differentiation 4 via promoter methylation","year":2011,"lang":"en","type":"article","venue":"Human Pathology","topic":"Epigenetics and DNA Methylation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":42,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Hospital for Sick Children; SickKids Foundation","funders":"","keywords":"Parakeratosis; Psoriasis; Methylation; Epidermis (zoology); Biology; Cellular differentiation; DNA methylation; Cancer research; Molecular biology; Gene expression; Immunology; Gene; Genetics; Anatomy","score_opus":0.020596665043480105,"score_gpt":0.24870111715389473,"score_spread":0.22810445211041463,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2074314856","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9964559,0.00015422597,0.0029212213,0.0000060701914,0.000028868028,0.00014604196,0.000011176123,0.0000030564208,0.0002734474],"genre_scores_gemma":[0.9993133,0.00002180067,0.00043788657,0.0000117426525,0.000020057822,0.000013274607,0.00013399644,0.000012652675,0.000035298206],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99918187,0.00013397608,0.00029275063,0.00019858069,0.00007960227,0.000113231006],"domain_scores_gemma":[0.99943244,0.000007684601,0.00024941782,0.00017890999,0.000112624744,0.000018909015],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00020159532,0.00009326341,0.00017781355,0.00008373257,0.000019154466,0.000001847761,0.00006162158,0.00018027995,0.00003562301],"category_scores_gemma":[0.000027881279,0.00008443031,0.00004093645,0.00008599676,0.00008003278,0.0000035658943,0.000028725031,0.000051141735,7.2092104e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00004529429,0.00017559901,0.15255785,0.000013201169,0.000023284065,0.000002286987,0.00079996506,0.0000047961908,0.8456981,0.00006215592,0.0000031032346,0.0006143517],"study_design_scores_gemma":[0.00042547495,0.00045640496,0.3357697,0.000011520218,0.0000141545715,7.731688e-7,0.000010242526,0.000019215237,0.6625518,0.00067057565,0.000007490686,0.00006264496],"about_ca_topic_score_codex":0.00002317356,"about_ca_topic_score_gemma":0.0001725141,"teacher_disagreement_score":0.18321185,"about_ca_system_score_codex":0.00000785477,"about_ca_system_score_gemma":0.000014119922,"threshold_uncertainty_score":0.3442968},"labels":[],"label_agreement":null},{"id":"W2074972712","doi":"10.1053/hupa.2001.21132","title":"Mapping a tumor suppressor gene to chromosome 2p13 in metanephric adenoma by microsatellite allelotyping","year":2001,"lang":"en","type":"article","venue":"Human Pathology","topic":"Renal and related cancers","field":"Biochemistry, Genetics and Molecular Biology","cited_by":43,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Vancouver Hospital and Health Sciences Centre; University of British Columbia","funders":"","keywords":"Loss of heterozygosity; Biology; Chromosome; Microsatellite; Allele; Wilms' tumor; Tumor suppressor gene; Genetics; Gene; Molecular biology; Pathology; Carcinogenesis; Medicine","score_opus":0.010559893145662583,"score_gpt":0.2413930331961817,"score_spread":0.2308331400505191,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2074972712","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9933375,0.00478748,0.0002290637,0.00021097467,0.00012540616,0.00021650984,0.000017612274,0.00001908788,0.001056371],"genre_scores_gemma":[0.99563736,0.0004991237,0.00044298114,0.0013460096,0.00016658465,0.00005975205,0.00016324373,0.00003386427,0.0016511076],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99853104,0.00009618824,0.00030390095,0.00052537944,0.00007510899,0.00046838756],"domain_scores_gemma":[0.9994762,0.000006409041,0.00007570137,0.00030276825,0.000030603722,0.000108333996],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014416318,0.00020071027,0.00025078253,0.00012953051,0.0000896432,0.000018302362,0.00024996404,0.00019793844,0.00006965962],"category_scores_gemma":[0.000017215749,0.00019230094,0.00008298285,0.00018852792,0.00008289052,0.000004025794,0.0001241922,0.00016868756,0.000066324945],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00005580468,0.00004317571,0.0007197899,0.000012406384,0.000032354837,0.00045221022,0.00023401658,0.000061092884,0.9963687,0.00001559294,0.0014632526,0.0005415951],"study_design_scores_gemma":[0.0017354637,0.00058473164,0.015581084,0.00005875312,0.000024553501,0.0018445028,0.00016486294,0.000015865864,0.7538829,0.00017846581,0.22521378,0.00071506854],"about_ca_topic_score_codex":0.000024537947,"about_ca_topic_score_gemma":0.000039120798,"teacher_disagreement_score":0.24248584,"about_ca_system_score_codex":0.000035345198,"about_ca_system_score_gemma":0.000027181291,"threshold_uncertainty_score":0.78418046},"labels":[],"label_agreement":null},{"id":"W2076639821","doi":"10.1016/j.humpath.2006.04.008","title":"Expression of Rsf-1, a chromatin-remodeling gene, in ovarian and breast carcinoma","year":2006,"lang":"en","type":"article","venue":"Human Pathology","topic":"Genomics and Chromatin Dynamics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":38,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Vancouver General Hospital","funders":"National Cancer Institute","keywords":"Serous fluid; Serous carcinoma; Ovarian carcinoma; Ovarian cancer; Clear cell carcinoma; Pathology; Immunohistochemistry; Clear cell; Biology; Tissue microarray; Cystadenocarcinoma; Breast cancer; Breast carcinoma; Cancer research; Carcinoma; Cancer; Medicine; Internal medicine","score_opus":0.006384799625882224,"score_gpt":0.21213942575104158,"score_spread":0.20575462612515935,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2076639821","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99800813,0.00033109827,0.0006851772,0.000017123079,0.000029691348,0.00008617308,0.00002475254,0.000003993946,0.0008138497],"genre_scores_gemma":[0.9969974,0.00001302213,0.0026633914,0.000023381966,0.000078558456,0.000007691164,0.00012245194,0.000016632335,0.00007743866],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99921966,0.000047661742,0.0002579964,0.00025924484,0.000044582634,0.00017083368],"domain_scores_gemma":[0.9996131,0.000003883127,0.00009549858,0.00023218602,0.000029650528,0.000025671108],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00011713271,0.00011052655,0.000159325,0.000059624148,0.00004621897,0.0000060879142,0.00009779348,0.00015082404,0.000008391378],"category_scores_gemma":[0.0000049296505,0.000113299764,0.000034427954,0.00003401573,0.00007766955,0.0000019262434,0.00011542657,0.000057023804,7.8147883e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000012098132,0.000044946602,0.026590824,0.000019726716,0.0000015847191,0.0000140239,0.000057797144,0.00020366102,0.9725473,0.00034995162,0.00003348696,0.00012459308],"study_design_scores_gemma":[0.0015493031,0.00021349704,0.59650546,0.000029737601,0.000012767164,0.00059722795,0.000091546615,0.0014310286,0.39666727,0.0025191386,0.00008793534,0.00029507343],"about_ca_topic_score_codex":0.00008304286,"about_ca_topic_score_gemma":0.0001532971,"teacher_disagreement_score":0.57588005,"about_ca_system_score_codex":0.000008013992,"about_ca_system_score_gemma":0.000020430683,"threshold_uncertainty_score":0.46202302},"labels":[],"label_agreement":null},{"id":"W2078465729","doi":"10.1016/j.humpath.2011.04.023","title":"The CIC-DUX4 fusion transcript is present in a subgroup of pediatric primitive round cell sarcomas","year":2011,"lang":"en","type":"article","venue":"Human Pathology","topic":"Sarcoma Diagnosis and Treatment","field":"Medicine","cited_by":177,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hospital for Sick Children; University of Toronto","funders":"Canadian Institutes of Health Research","keywords":"Biology; Medicine; Pathology","score_opus":0.06020397404442417,"score_gpt":0.28595533628490083,"score_spread":0.22575136224047665,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2078465729","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.984918,0.0054883785,0.00000988493,0.00032725037,0.00010114816,0.0005444732,0.000009337226,0.000018022976,0.0085835],"genre_scores_gemma":[0.998197,0.0008888676,0.0001511578,0.00019998611,0.000090917,0.00010080436,0.000010662333,0.00001962572,0.00034098027],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9987685,0.00013883569,0.00035208164,0.0002836326,0.00016176734,0.00029518566],"domain_scores_gemma":[0.9992754,0.00011328932,0.00011492101,0.00037243898,0.000057055207,0.00006690403],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00021046067,0.00015438609,0.0003149697,0.00014113907,0.00009310384,0.0000048969146,0.00011910396,0.00011221559,0.00022418123],"category_scores_gemma":[0.000013091761,0.00010370329,0.00013083339,0.00013969716,0.00013273016,0.000031546017,0.000045909528,0.000165936,0.000027285712],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002828269,0.0037535485,0.96395534,0.000099167,0.00004318045,0.0013769754,0.015016954,1.3469251e-7,0.008103859,0.002558439,0.0014883932,0.003321204],"study_design_scores_gemma":[0.002714543,0.00083874067,0.9802374,0.000015731044,0.00022915276,0.000048050202,0.00065064227,0.000003665115,0.013485806,0.0008382723,0.0008367313,0.00010122329],"about_ca_topic_score_codex":0.00015082289,"about_ca_topic_score_gemma":0.0002065452,"teacher_disagreement_score":0.016282124,"about_ca_system_score_codex":0.000051398973,"about_ca_system_score_gemma":0.000036376645,"threshold_uncertainty_score":0.42288977},"labels":[],"label_agreement":null},{"id":"W2078714849","doi":"10.1016/j.humpath.2007.07.014","title":"The expression of cytokeratin 5/6 in invasive lobular carcinoma of the breast: evidence of a “basal-like” subset?","year":2008,"lang":"en","type":"article","venue":"Human Pathology","topic":"Breast Lesions and Carcinomas","field":"Medicine","cited_by":33,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"","keywords":"Cytokeratin; Immunohistochemistry; Breast cancer; Pathology; Progesterone receptor; Basal (medicine); Estrogen receptor; Biology; Staining; Medicine; Cancer; Internal medicine; Endocrinology","score_opus":0.039970398872792835,"score_gpt":0.2719381649265412,"score_spread":0.2319677660537484,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2078714849","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99734795,0.0016638868,0.000012459359,0.00037291428,0.00006465583,0.00030281278,0.00000961746,0.0000044755543,0.00022120723],"genre_scores_gemma":[0.99951845,0.00008577361,0.000078393714,0.00010076272,0.000032026644,0.000019228639,0.0000026430525,0.000012314126,0.00015042807],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9985698,0.00029871272,0.00049907755,0.00019807798,0.0002398658,0.00019448],"domain_scores_gemma":[0.9985806,0.00021490842,0.00028747632,0.00069884106,0.00017622678,0.000041989722],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003482773,0.00012071713,0.00038481678,0.000085578824,0.0001155506,0.0000013633264,0.00025360915,0.00011337079,0.000051116906],"category_scores_gemma":[0.0001295078,0.000068193156,0.00013062412,0.00020458315,0.0007146615,0.000047615395,0.00015365232,0.000216319,0.000002159361],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00017075983,0.00013156142,0.43703213,0.00010002414,0.0000046933073,0.00015099434,0.0016147717,0.0000035460607,0.56001973,0.000412782,0.00025106085,0.000107937085],"study_design_scores_gemma":[0.00071883714,0.0002706668,0.8693163,0.00046162674,0.000023909288,0.0010823036,0.00031240963,0.0000068684367,0.12757054,0.0001755017,0.000010567217,0.000050482806],"about_ca_topic_score_codex":0.00013168502,"about_ca_topic_score_gemma":0.00012104555,"teacher_disagreement_score":0.4324492,"about_ca_system_score_codex":0.000025571182,"about_ca_system_score_gemma":0.00019304283,"threshold_uncertainty_score":0.27808362},"labels":[],"label_agreement":null},{"id":"W2078786864","doi":"10.1016/j.humpath.2013.02.020","title":"Malignant peripheral nerve sheath tumor arising in a traumatic neuroma: a case report","year":2013,"lang":"en","type":"article","venue":"Human Pathology","topic":"Neurofibromatosis and Schwannoma Cases","field":"Medicine","cited_by":9,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Ottawa; Ottawa Hospital","funders":"","keywords":"Pathology; Vimentin; Neuroma; Medicine; Glial fibrillary acidic protein; Biopsy; Soft tissue; Malignant peripheral nerve sheath tumor; Epithelioid sarcoma; Anatomy; Immunohistochemistry; Surgery","score_opus":0.03842863594486633,"score_gpt":0.29289272231633284,"score_spread":0.2544640863714665,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2078786864","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9966567,0.00012168855,0.0000152251105,0.00035328162,0.00014102296,0.0005762047,0.000002752479,0.000088554596,0.0020445483],"genre_scores_gemma":[0.99796337,9.4799924e-7,0.0006673493,0.0005911812,0.000094698684,0.00011790265,0.000014855566,0.00004199062,0.00050768175],"study_design_codex":"case_report","study_design_gemma":"case_report","domain_scores_codex":[0.998101,0.00017062988,0.00066600513,0.0004900124,0.00014237259,0.0004300025],"domain_scores_gemma":[0.9990708,0.000047831025,0.00014988035,0.000522407,0.000052521395,0.00015652258],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002236561,0.00021819847,0.0005458997,0.00019350645,0.00011893177,0.000044557957,0.00006868352,0.00008319355,0.0005568582],"category_scores_gemma":[0.00010433994,0.00018337197,0.00012535778,0.00014835775,0.00012108474,0.00011256321,0.000056925677,0.00028409818,0.00005803297],"study_design_candidate":"case_report","study_design_consensus":"case_report","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000018594334,0.00024583534,0.022762781,0.000087928594,0.0000066160424,0.90903103,0.0007766233,0.0000015325343,0.06598117,0.00022677451,0.00063918304,0.00022193842],"study_design_scores_gemma":[0.0010920672,0.0006884716,0.2046225,0.00009067159,0.000035862315,0.7915903,0.00043431827,0.00019097427,0.00076408644,0.00026094116,0.000067981375,0.00016184276],"about_ca_topic_score_codex":0.00042453717,"about_ca_topic_score_gemma":0.000078968966,"teacher_disagreement_score":0.18185972,"about_ca_system_score_codex":0.00004675542,"about_ca_system_score_gemma":0.00004931907,"threshold_uncertainty_score":0.74776924},"labels":[],"label_agreement":null},{"id":"W2079291328","doi":"10.1016/j.humpath.2014.08.009","title":"The plexiform spindle cell nevus nevi and atypical variants: report of 128 cases","year":2014,"lang":"en","type":"article","venue":"Human Pathology","topic":"Genetic and rare skin diseases.","field":"Biochemistry, Genetics and Molecular Biology","cited_by":23,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Vancouver General Hospital; University of British Columbia","funders":"","keywords":"Dermatology; Medicine; Nevus; Pathology; Melanoma; Cancer research","score_opus":0.008732386163395158,"score_gpt":0.2470838453739147,"score_spread":0.23835145921051953,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2079291328","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.994064,0.0016282958,0.00043697093,0.00008314106,0.00012477444,0.0001019301,0.000007728225,0.000006624651,0.0035465753],"genre_scores_gemma":[0.99824446,0.00011390107,0.0002328831,0.00014549211,0.00018022259,0.000011284078,0.000043677534,0.000012949302,0.001015124],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9991397,0.00008014604,0.0002372107,0.00027435753,0.00006556045,0.00020300361],"domain_scores_gemma":[0.99928904,0.000021461186,0.00011828637,0.00044642633,0.00005295251,0.00007184848],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00021355199,0.00011022163,0.00014109767,0.000017837581,0.00015727305,0.000010355705,0.00014090307,0.0001333272,0.000023200048],"category_scores_gemma":[0.00014786726,0.00007922307,0.00006070431,0.000025593512,0.00032846126,0.0000013279669,0.00014300307,0.00006088217,0.000004854485],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00058290875,0.0005116287,0.061425745,0.00017103384,0.00010524212,0.0013078322,0.00022664646,0.000022348759,0.8942227,0.008233721,0.02104674,0.012143458],"study_design_scores_gemma":[0.0018170517,0.0022104173,0.7697859,0.000025452606,0.00012501916,0.005606696,0.0002392038,0.00003375761,0.07260102,0.004173625,0.14285803,0.0005238265],"about_ca_topic_score_codex":0.000008397292,"about_ca_topic_score_gemma":0.000028238404,"teacher_disagreement_score":0.82162166,"about_ca_system_score_codex":0.0000026670175,"about_ca_system_score_gemma":0.00003385054,"threshold_uncertainty_score":0.3230623},"labels":[],"label_agreement":null},{"id":"W2079348349","doi":"10.1016/j.humpath.2014.06.014","title":"Biopsy characteristics in men with a preoperative diagnosis of prostatic adenocarcinoma with high Gleason score (8-10) predict pathologic outcome in radical prostatectomy","year":2014,"lang":"en","type":"article","venue":"Human Pathology","topic":"Prostate Cancer Diagnosis and Treatment","field":"Medicine","cited_by":15,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Hôpital du Sacré-Cœur de Montréal; McGill University Health Centre","funders":"","keywords":"Medicine; Prostatectomy; Biopsy; Stage (stratigraphy); Urology; Prostate cancer; Prostatic adenocarcinoma; Cancer; Internal medicine; Radiology","score_opus":0.02260687435745876,"score_gpt":0.2697298239524022,"score_spread":0.24712294959494344,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2079348349","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99630046,0.00031411005,0.000032358963,0.00038005205,0.000025748861,0.002518842,0.00009869987,0.0000478817,0.0002818226],"genre_scores_gemma":[0.9956198,0.00007559731,0.0013109262,0.00015699878,0.000039350638,0.002428328,0.00022642162,0.000051453302,0.0000911569],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9975018,0.00029286658,0.00071756594,0.000694853,0.00027536106,0.00051758194],"domain_scores_gemma":[0.9987962,0.00015714996,0.00031014762,0.0004643968,0.00012715484,0.00014490965],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00036574024,0.00037942242,0.0011313958,0.00031003627,0.00005461448,0.000016118047,0.00012580193,0.00016791954,0.00012951424],"category_scores_gemma":[0.00013341273,0.00024786204,0.000050952527,0.0003421361,0.0005573974,0.00008865771,0.00006256308,0.000356077,0.000010028203],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00122736,0.0012953605,0.9890069,0.00041136227,0.00004510259,0.0044847284,0.0017081877,0.0000072441508,0.0004117883,0.00053522154,0.00003282804,0.0008339306],"study_design_scores_gemma":[0.009826994,0.011157158,0.9745857,0.0008700704,0.00015178783,0.0005097807,0.00015318563,0.000052400792,0.0022336014,0.00019012141,0.000018437739,0.00025077575],"about_ca_topic_score_codex":0.00009760445,"about_ca_topic_score_gemma":0.0001240455,"teacher_disagreement_score":0.0144211985,"about_ca_system_score_codex":0.00024053939,"about_ca_system_score_gemma":0.00013435677,"threshold_uncertainty_score":0.9999974},"labels":[],"label_agreement":null},{"id":"W2080253781","doi":"10.1016/j.humpath.2011.03.008","title":"Interobserver agreement for Polyomavirus nephropathy grading in renal allografts using the working proposal from the 10th Banff Conference on Allograft Pathology","year":2011,"lang":"en","type":"article","venue":"Human Pathology","topic":"Polyomavirus and related diseases","field":"Medicine","cited_by":58,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Calgary Laboratory Services; University of Calgary","funders":"","keywords":"Nephropathy; Grading (engineering); Viral load; Medicine; Concordance; BK virus; Polyomavirus Infections; Pathology; Internal medicine; Biology; Immunology; Virus","score_opus":0.15744589256470382,"score_gpt":0.3252034760828037,"score_spread":0.16775758351809988,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2080253781","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9948743,0.0010487367,0.0005491941,0.0007357946,0.00046594715,0.0010930983,0.000033616496,0.000063653526,0.0011356728],"genre_scores_gemma":[0.99539983,0.000065311986,0.0014172653,0.0024576858,0.00029624003,0.00013456238,0.00006766977,0.000046040772,0.00011541708],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9974748,0.00047104797,0.0005604601,0.0006161447,0.00019882455,0.00067870814],"domain_scores_gemma":[0.9987219,0.00018075183,0.000246439,0.00066114665,0.00006514221,0.0001246295],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005755358,0.00034576317,0.00048625655,0.00015432796,0.00038534493,0.000032306114,0.00042084692,0.00029111802,0.00021657813],"category_scores_gemma":[0.000081901075,0.00019770607,0.00023395503,0.00016792364,0.0006452473,0.000054435674,0.0001817638,0.0006091085,0.000019063305],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0061694477,0.0034999799,0.440867,0.000098223696,0.00090709125,0.010830316,0.034125227,0.000053277457,0.41725743,0.05986402,0.0021718265,0.024156172],"study_design_scores_gemma":[0.014361915,0.0053780447,0.91929686,0.0018700922,0.0017943562,0.0011404515,0.0040762685,0.0020361561,0.008292638,0.036186863,0.004123187,0.0014431786],"about_ca_topic_score_codex":0.00043896807,"about_ca_topic_score_gemma":0.0008363223,"teacher_disagreement_score":0.47842985,"about_ca_system_score_codex":0.00008821075,"about_ca_system_score_gemma":0.00011898911,"threshold_uncertainty_score":0.806222},"labels":[],"label_agreement":null},{"id":"W2083721360","doi":"10.1016/j.humpath.2005.09.015","title":"Serous papillary carcinoma of the endometrium arising from endometrial polyps: a clinical, histological, and immunohistochemical study of 13 cases","year":2005,"lang":"en","type":"article","venue":"Human Pathology","topic":"Endometrial and Cervical Cancer Treatments","field":"Medicine","cited_by":49,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval; Hôtel-Dieu de Québec; Centre hospitalier universitaire de Québec","funders":"","keywords":"Endometrium; Immunohistochemistry; Pathology; Serous fluid; Serous carcinoma; Carcinoma; Serous membrane; Medicine; Endometrial Polyp; Pathological; Internal medicine; Cancer; Ovarian cancer","score_opus":0.07769101317039113,"score_gpt":0.35967565397322876,"score_spread":0.28198464080283764,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2083721360","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9910037,0.007304107,0.0000040096197,0.00013143057,0.00033027882,0.00071669574,0.000043729582,0.000023377357,0.00044265887],"genre_scores_gemma":[0.99884814,0.000119622804,0.0002618976,0.0002288862,0.0004060793,0.000027767324,0.000016827304,0.000018987965,0.00007176685],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9974282,0.0004449569,0.0010720115,0.00047080778,0.00032186415,0.00026215176],"domain_scores_gemma":[0.9971054,0.0015782404,0.00047791703,0.00060388155,0.00011260333,0.000121958874],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003950277,0.00022195737,0.0011532905,0.0002736418,0.00011815225,0.000006018251,0.00021042954,0.0002369305,0.00023733747],"category_scores_gemma":[0.0018005264,0.00014381978,0.00026103618,0.00055819366,0.0005890223,0.000035116038,0.00024877567,0.0003718088,0.000003911039],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.002649544,0.0052854368,0.8908585,0.000047482354,0.0003671868,0.00054518494,0.00093501125,6.584562e-7,0.08682848,0.00003627245,0.0002114191,0.012234833],"study_design_scores_gemma":[0.031256303,0.010812983,0.94484663,0.00005391481,0.0010820592,0.00042628215,0.0007431639,0.0000031305644,0.009896094,0.0001652177,0.000504243,0.00020997529],"about_ca_topic_score_codex":0.0009392585,"about_ca_topic_score_gemma":0.000092239294,"teacher_disagreement_score":0.076932386,"about_ca_system_score_codex":0.00010347228,"about_ca_system_score_gemma":0.0000636338,"threshold_uncertainty_score":0.58648},"labels":[],"label_agreement":null},{"id":"W2085163422","doi":"10.1016/j.humpath.2013.12.010","title":"Matched biopsy and resection specimens of gastric and gastroesophageal adenocarcinoma show high concordance in HER2 status","year":2014,"lang":"en","type":"article","venue":"Human Pathology","topic":"Gastric Cancer Management and Outcomes","field":"Medicine","cited_by":55,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"St. Michael's Hospital; Toronto East General Hospital; Sunnybrook Health Science Centre; Health Sciences Centre; University of Toronto","funders":"","keywords":"Biopsy; Concordance; Trastuzumab; Medicine; Adenocarcinoma; Cancer; Immunohistochemistry; Pathology; Internal medicine; Oncology; Breast cancer","score_opus":0.016066918589536856,"score_gpt":0.26461038875822157,"score_spread":0.24854347016868472,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2085163422","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9980713,0.00041972098,0.00020598136,0.00018405345,0.00009715799,0.00021675834,0.0000045476318,0.000020923168,0.0007795332],"genre_scores_gemma":[0.9980436,0.00007476808,0.001086046,0.0001119441,0.00011069205,0.000010519852,0.00001494727,0.000013328675,0.0005341291],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9990025,0.00007436797,0.00025449097,0.00028316505,0.00010310039,0.00028233937],"domain_scores_gemma":[0.9995667,0.000034727058,0.000104157436,0.00019069045,0.000025568075,0.000078158766],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00021365877,0.00012385799,0.00037817727,0.0003363995,0.000035284367,0.000007899776,0.000039052826,0.000061571795,0.00007776032],"category_scores_gemma":[0.000033828772,0.00011716277,0.000024362456,0.00018888412,0.00018831843,0.000042082756,0.00006813327,0.00014514163,0.0000022303866],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00017134467,0.00004150752,0.98865205,0.00011940708,0.00001246501,0.00025077842,0.00026213325,0.000001369881,0.006944917,0.0012105374,0.00014145275,0.0021920283],"study_design_scores_gemma":[0.0030838626,0.0009998075,0.99453044,0.000028966408,0.00004424095,0.00029382404,0.0001756065,0.000026612037,0.00021000992,0.00045006702,0.000093434996,0.00006314042],"about_ca_topic_score_codex":0.00013346683,"about_ca_topic_score_gemma":0.0001539398,"teacher_disagreement_score":0.006734907,"about_ca_system_score_codex":0.00004299688,"about_ca_system_score_gemma":0.000011794751,"threshold_uncertainty_score":0.4777759},"labels":[],"label_agreement":null},{"id":"W2088413860","doi":"10.1016/j.humpath.2014.05.005","title":"Adenoma and carcinoma components in colonic tumors show discordance for KRAS mutation","year":2014,"lang":"en","type":"article","venue":"Human Pathology","topic":"Colorectal Cancer Treatments and Studies","field":"Medicine","cited_by":19,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Manitoba Health","funders":"","keywords":"KRAS; Concordance; Adenoma; Carcinoma; Pathology; Medicine; Mutation; Colorectal cancer; Submucosa; Oncology; Internal medicine; Cancer research; Biology; Cancer; Genetics; Gene","score_opus":0.03838944525062796,"score_gpt":0.30300215943956393,"score_spread":0.26461271418893595,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2088413860","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99782085,0.00052594603,0.000050982253,0.00038354282,0.00006803107,0.00042728553,0.000006853436,0.000015578795,0.00070090656],"genre_scores_gemma":[0.9991274,0.000009425901,0.00017283414,0.00017608018,0.000056178407,0.0001751879,0.000038614617,0.000010614625,0.00023365849],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99938506,0.00003491633,0.00014360923,0.00021980243,0.00004749196,0.000169143],"domain_scores_gemma":[0.9997459,0.000054659642,0.00004660178,0.00009341687,0.00002447098,0.000034937122],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000074125295,0.00009475872,0.00026755253,0.00006596994,0.00008992864,0.0000051415186,0.000026538843,0.000035761128,0.00001059518],"category_scores_gemma":[0.00003063369,0.00008063234,0.000028156164,0.000038670354,0.000106421765,0.000022813767,0.000027052323,0.00005748101,0.0000030113792],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00048603813,0.00021264346,0.9784024,0.00013678451,0.00002735471,0.0003512327,0.0024265898,0.0000020118146,0.009429381,0.003507992,0.00016963159,0.0048479903],"study_design_scores_gemma":[0.0028588474,0.0016054729,0.9931486,0.000029421988,0.00003601824,0.0001415269,0.00012430639,0.00013901811,0.00024890213,0.0013202365,0.0002746841,0.00007293287],"about_ca_topic_score_codex":0.000051525254,"about_ca_topic_score_gemma":0.00062980613,"teacher_disagreement_score":0.014746283,"about_ca_system_score_codex":0.0000625099,"about_ca_system_score_gemma":0.000009655283,"threshold_uncertainty_score":0.3288091},"labels":[],"label_agreement":null},{"id":"W2092201943","doi":"10.1016/j.humpath.2014.05.016","title":"Distinctive histopathologic phenotype in resection specimens from patients with Crohn’s disease receiving anti–TNF-α therapy","year":2014,"lang":"en","type":"article","venue":"Human Pathology","topic":"Inflammatory Bowel Disease","field":"Biochemistry, Genetics and Molecular Biology","cited_by":29,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Mount Sinai Hospital; University of British Columbia","funders":"","keywords":"Medicine; Fibrosis; Infliximab; Pathology; Crohn's disease; Necrosis; Gastroenterology; Granuloma; H&E stain; Adalimumab; Inflammation; Tumor necrosis factor alpha; Muscularis mucosae; Internal medicine; Anatomical pathology; Surgery; Immunohistochemistry; Disease","score_opus":0.00926764304128874,"score_gpt":0.22603151463084042,"score_spread":0.21676387158955168,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2092201943","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9976971,0.00010166576,0.00029476246,0.000019295461,0.00019247303,0.0003346972,0.000052693696,0.000032906795,0.0012744021],"genre_scores_gemma":[0.99851406,0.000015188333,0.00015707356,0.00024593214,0.000265174,0.00006058784,0.0005550351,0.00004094096,0.00014603442],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99821776,0.00041911507,0.00024590534,0.0006563632,0.00013214046,0.00032869703],"domain_scores_gemma":[0.99904585,0.000019582245,0.000151012,0.0005585964,0.00010460406,0.00012036849],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00020307544,0.00023614867,0.0002072221,0.00008585389,0.00015161812,0.000018855086,0.00019146336,0.00015171056,0.00010918391],"category_scores_gemma":[0.00015127794,0.00021019037,0.00006133332,0.000064839245,0.00021567883,0.000009646224,0.000093635404,0.00016017978,0.00003187495],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0014035015,0.00032502122,0.96205854,0.000009835272,0.00001419747,0.0005025388,0.00018051118,0.000056249144,0.034088206,0.00018889554,0.00017396022,0.0009985344],"study_design_scores_gemma":[0.0019508126,0.00030544415,0.995318,0.00001669726,0.0000148031895,0.0000015597881,0.000016781807,0.000012362353,0.0005454275,0.0007480008,0.00079689396,0.00027323308],"about_ca_topic_score_codex":0.000017801487,"about_ca_topic_score_gemma":0.00023865336,"teacher_disagreement_score":0.03354278,"about_ca_system_score_codex":0.00005771685,"about_ca_system_score_gemma":0.000041286534,"threshold_uncertainty_score":0.8571314},"labels":[],"label_agreement":null},{"id":"W2093208243","doi":"10.1016/j.humpath.2015.02.010","title":"Loss of ADAM17 is associated with severe multiorgan dysfunction","year":2015,"lang":"en","type":"article","venue":"Human Pathology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":43,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hospital for Sick Children","funders":"National Institute of Diabetes and Digestive and Kidney Diseases; California Institute of Regenerative Medicine","keywords":"Frameshift mutation; Medicine; Proband; Rash; Exome sequencing; Immunology; Diarrhea; Sepsis; Exome; Mutation; Pathology; Dermatology; Biology; Genetics","score_opus":0.04198290441621564,"score_gpt":0.29439132934429807,"score_spread":0.2524084249280824,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2093208243","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99411273,0.00006389325,0.00013934015,0.0001403098,0.000055262222,0.00014564536,0.000013030543,0.000043118944,0.005286683],"genre_scores_gemma":[0.9955456,0.0000031239226,0.00011599261,0.00029640362,0.00004231232,0.000003828707,0.00004849239,0.000013369617,0.0039308295],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9991837,0.00006608343,0.000187507,0.00021357094,0.00018523337,0.00016387668],"domain_scores_gemma":[0.9992126,0.00002421825,0.00010745342,0.00027178854,0.0002953647,0.00008854929],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00025730304,0.000094793606,0.00029394735,0.000048652386,0.000044054654,0.0000025223555,0.00004462294,0.00013305739,0.00021717366],"category_scores_gemma":[0.00018806724,0.000073514064,0.000044095515,0.0001035127,0.00019944945,0.000041638254,0.00001828949,0.00014310543,0.000034553217],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00048553807,0.00030944796,0.9798254,0.0000424744,0.000052198313,0.00034729688,0.0015298447,0.000001421508,0.0132234385,0.000219195,0.0036300973,0.0003336722],"study_design_scores_gemma":[0.0031031508,0.0013696025,0.9912462,0.00006634431,0.00009859031,0.00014459866,0.0005888791,0.000012127271,0.0025207687,0.00037600947,0.000364542,0.000109184526],"about_ca_topic_score_codex":0.00002260619,"about_ca_topic_score_gemma":0.0002073701,"teacher_disagreement_score":0.011420827,"about_ca_system_score_codex":0.00007398706,"about_ca_system_score_gemma":0.000091318616,"threshold_uncertainty_score":0.29978165},"labels":[],"label_agreement":null},{"id":"W2094764043","doi":"10.1016/j.humpath.2009.02.001","title":"Expression patterns of Trk-A, Trk-B, GRP78, and p75NRT in olfactory neuroblastoma","year":2009,"lang":"en","type":"article","venue":"Human Pathology","topic":"Neuroblastoma Research and Treatments","field":"Medicine","cited_by":22,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University Health Network; University of Toronto","funders":"","keywords":"Trk receptor; Neuroblastoma; Pathology; Medicine; Neurotrophin; Tropomyosin receptor kinase A; Immunohistochemistry; Biology; Receptor; Internal medicine","score_opus":0.03354358996807217,"score_gpt":0.31164192831755644,"score_spread":0.2780983383494843,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2094764043","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9982246,0.00009085608,0.000012976373,0.00018460193,0.00003350708,0.00026368734,0.0000086292275,0.000030673687,0.0011504301],"genre_scores_gemma":[0.99914825,0.000052459698,0.00006549287,0.000259023,0.00003389502,0.000010919273,0.0000141229275,0.000015135638,0.00040068588],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99881476,0.00013161344,0.000255428,0.0003219286,0.00016859677,0.0003076742],"domain_scores_gemma":[0.9994261,0.00005527594,0.000067113804,0.0002790627,0.000029941037,0.00014246814],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00008799592,0.00014705535,0.00033719535,0.00027212218,0.000041375853,0.0000049773053,0.00007002911,0.000093798,0.00010595416],"category_scores_gemma":[0.000050993418,0.00012320874,0.000051637762,0.00007486451,0.00008717093,0.000057307374,0.00004803,0.00023969157,0.000013595828],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00041471727,0.0008209874,0.12688376,0.0000762234,0.000009006435,0.0036641015,0.0004951627,6.66021e-7,0.8590392,0.00014556102,0.00019352812,0.008257076],"study_design_scores_gemma":[0.0033642554,0.0029038105,0.9300467,0.00010443422,0.000012979139,0.000374812,0.00003365015,0.0000046451387,0.0626738,0.00028465808,0.000117570686,0.000078726305],"about_ca_topic_score_codex":0.0000112285,"about_ca_topic_score_gemma":0.000034352142,"teacher_disagreement_score":0.8031629,"about_ca_system_score_codex":0.000023107294,"about_ca_system_score_gemma":0.000022991799,"threshold_uncertainty_score":0.5024306},"labels":[],"label_agreement":null},{"id":"W2095210456","doi":"10.1016/j.humpath.2013.11.007","title":"Neuroblastoma or not neuroblastoma","year":2013,"lang":"en","type":"letter","venue":"Human Pathology","topic":"Neuroblastoma Research and Treatments","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Centre Hospitalier Universitaire Sainte-Justine","funders":"","keywords":"Neuroblastoma; Medicine; Biology; Genetics","score_opus":0.06478023503707844,"score_gpt":0.3290222889256387,"score_spread":0.26424205388856026,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2095210456","genre_codex":"commentary","genre_gemma":"commentary","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"commentary","genre_consensus":"commentary","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.43831512,0.000078293786,0.000014362133,0.5390834,0.0014148006,0.003575111,0.00022999298,0.0010761697,0.016212739],"genre_scores_gemma":[0.044418238,0.000057253397,0.00024024288,0.81503016,0.0042749224,0.0005080327,0.0006453991,0.00044890758,0.13437685],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99467725,0.0005147592,0.0007353414,0.0015543282,0.0008745341,0.0016438079],"domain_scores_gemma":[0.9970362,0.00030612518,0.00031684953,0.0016765549,0.0002481796,0.00041607977],"candidate_categories":["metaepi_narrow","research_integrity","insufficient_payload"],"consensus_categories":["research_integrity","insufficient_payload"],"category_scores_codex":[0.00011382823,0.00094364857,0.0013892541,0.0008391486,0.0002827399,0.00010597007,0.0005468596,0.0013117008,0.0051015657],"category_scores_gemma":[0.00022863319,0.0007180481,0.00045937553,0.00029893592,0.0005716207,0.00011128085,0.00040758308,0.004279232,0.008248831],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00040905192,0.00022142663,0.000053514254,0.00033128058,0.0001254277,0.16380121,0.00003320137,1.8909374e-7,0.012218382,0.00002125181,0.82192165,0.00086339493],"study_design_scores_gemma":[0.004437977,0.010064157,0.013602533,0.0002172472,0.00036280212,0.025729362,0.0000060210577,0.000013514807,0.003614788,0.000117210875,0.94106984,0.0007645213],"about_ca_topic_score_codex":0.000028619983,"about_ca_topic_score_gemma":0.000022187913,"teacher_disagreement_score":0.39389688,"about_ca_system_score_codex":0.00013862315,"about_ca_system_score_gemma":0.0002836351,"threshold_uncertainty_score":0.9999848},"labels":[],"label_agreement":null},{"id":"W2095640148","doi":"10.1016/j.humpath.2008.04.010","title":"Postirradiation morphea: an underrecognized complication of treatment for breast cancer","year":2008,"lang":"en","type":"article","venue":"Human Pathology","topic":"Systemic Sclerosis and Related Diseases","field":"Medicine","cited_by":50,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Nova Scotia Health Authority; Dalhousie University; Capital District Health Authority","funders":"","keywords":"Morphea; Medicine; Lichen sclerosus; Breast cancer; Radiation therapy; Mastectomy; Dermatology; Complication; Foreskin; Surgery; Axillary Lymph Node Dissection; Lymphedema; Cancer; Internal medicine; Sentinel lymph node","score_opus":0.1151722574439696,"score_gpt":0.3549010556108615,"score_spread":0.2397287981668919,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2095640148","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9978231,0.0007402029,0.0001312755,0.00027562928,0.00009038311,0.00052767695,0.00014689489,0.00003542638,0.0002294089],"genre_scores_gemma":[0.99864244,0.0003078489,0.00016679452,0.00014165915,0.00013199083,0.000149562,0.00023970676,0.000013103383,0.00020687761],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99942183,0.00003836449,0.00021414142,0.0001732478,0.000048562484,0.00010386977],"domain_scores_gemma":[0.9995018,0.000025619946,0.00011729779,0.00017322174,0.00011419357,0.00006783388],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00003985387,0.000078871395,0.00023676864,0.00006077938,0.0000857794,0.0000013347785,0.000028065671,0.00008668847,0.00013331564],"category_scores_gemma":[0.0000073395813,0.00006107438,0.00007310534,0.000046981404,0.00007127564,0.000025302645,0.0000035639196,0.000023147231,0.0000064673236],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0011573388,0.0023478433,0.27328327,0.00019658843,0.00032669015,0.00003660282,0.0024503763,0.00010384537,0.6731473,0.0014623073,0.0023933544,0.043094482],"study_design_scores_gemma":[0.0037427382,0.0008327772,0.99279326,0.00008132961,0.00016085722,0.00054035796,0.00007288965,0.00023877097,0.0012764739,0.000106277286,0.000085027496,0.000069262234],"about_ca_topic_score_codex":0.00013871586,"about_ca_topic_score_gemma":0.000015644036,"teacher_disagreement_score":0.71950996,"about_ca_system_score_codex":0.000107577805,"about_ca_system_score_gemma":0.0000778939,"threshold_uncertainty_score":0.2490541},"labels":[],"label_agreement":null},{"id":"W2096866380","doi":"10.1016/j.humpath.2006.05.016","title":"Glypican-3 expression in hepatocellular tumors: diagnostic value for preneoplastic lesions and hepatocellular carcinomas","year":2006,"lang":"en","type":"article","venue":"Human Pathology","topic":"Proteoglycans and glycosaminoglycans research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":228,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"St. Michael's Hospital","funders":"","keywords":"Glypican 3; Immunostaining; Pathology; Hepatocellular carcinoma; Cirrhosis; Immunohistochemistry; Tissue microarray; HCCS; Staining; Differential diagnosis; Medicine; Internal medicine","score_opus":0.016035846898024387,"score_gpt":0.260394300375523,"score_spread":0.24435845347749863,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2096866380","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99121755,0.0022247327,0.005165416,0.00005669047,0.000058672802,0.0009413869,0.000067515815,0.000018623012,0.0002494309],"genre_scores_gemma":[0.9970627,0.000067927685,0.0010544244,0.000052712072,0.00024157813,0.0005669269,0.00039551078,0.000045974546,0.0005122741],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9980072,0.00018218486,0.00037661777,0.00070720323,0.0001412305,0.00058560725],"domain_scores_gemma":[0.99916697,0.00012639641,0.00008525484,0.00043503902,0.00006816266,0.00011815352],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00029231576,0.00025867068,0.0003071578,0.0001650073,0.00021241514,0.00002984683,0.00023446664,0.00027481047,0.000015555399],"category_scores_gemma":[0.00025418418,0.00025181382,0.0000875244,0.00009949481,0.00024619166,0.0000068213785,0.00021697803,0.00017655971,0.0000046160276],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000091946466,0.00015188068,0.16584146,0.00007930825,0.0000056751883,0.00024852637,0.000040024406,0.000081077094,0.8314712,0.0013635524,0.00039013327,0.00023519257],"study_design_scores_gemma":[0.004167839,0.0019258555,0.2051085,0.00016497492,0.00004066545,0.0003030506,0.00008716845,0.0018530103,0.77241105,0.0052985866,0.007824067,0.00081521535],"about_ca_topic_score_codex":0.00020157061,"about_ca_topic_score_gemma":0.0003246152,"teacher_disagreement_score":0.059060153,"about_ca_system_score_codex":0.000029200972,"about_ca_system_score_gemma":0.000093577335,"threshold_uncertainty_score":0.9999934},"labels":[],"label_agreement":null},{"id":"W2098369659","doi":"10.1016/j.humpath.2015.07.012","title":"Detection of human papillomavirus in non–small cell carcinoma of the lung","year":2015,"lang":"en","type":"article","venue":"Human Pathology","topic":"Head and Neck Cancer Studies","field":"Medicine","cited_by":38,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Health Sciences Centre; Sunnybrook Health Science Centre","funders":"","keywords":"In situ hybridization; Tissue microarray; Immunohistochemistry; Pathology; Carcinoma; RNA; Cervix; Adenocarcinoma; Lung cancer; Cancer; Biology; Medicine; Cancer research; Internal medicine; Gene; Gene expression","score_opus":0.04714474917661446,"score_gpt":0.3036571924037389,"score_spread":0.2565124432271244,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2098369659","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9893749,0.00074879045,0.000007158862,0.000045377157,0.00013986809,0.00021978898,0.0000023109972,0.000007704071,0.009454123],"genre_scores_gemma":[0.99936324,0.0000069749926,0.000020935591,0.00007935819,0.00005731616,0.000017578779,0.0000013958995,0.000010532693,0.00044267814],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9992599,0.000077382094,0.00027143356,0.00014519118,0.00009423513,0.00015188793],"domain_scores_gemma":[0.99949586,0.000015148888,0.00011127446,0.00026146127,0.000078265155,0.00003795847],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00022128047,0.000084468535,0.0003453048,0.00008880015,0.000043384607,8.3805656e-7,0.00007748229,0.00008336233,0.000012169872],"category_scores_gemma":[0.000026808804,0.00006130114,0.000061268394,0.000113691916,0.00014989274,0.000012495844,0.000069292146,0.00014691411,0.0000027222595],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000044696357,0.0001239296,0.37826407,0.00014173676,0.0000058731603,0.0000515638,0.0045882817,0.0000010523396,0.6160487,0.000073800176,0.00023542618,0.00042087914],"study_design_scores_gemma":[0.0018217944,0.00080135465,0.8167069,0.000046155677,0.000037865815,0.00002300296,0.00046137528,0.000007663315,0.17980556,0.00013651498,0.00009796083,0.00005385303],"about_ca_topic_score_codex":0.00029023396,"about_ca_topic_score_gemma":0.0008776163,"teacher_disagreement_score":0.43844283,"about_ca_system_score_codex":0.00005524515,"about_ca_system_score_gemma":0.000040855062,"threshold_uncertainty_score":0.2499788},"labels":[],"label_agreement":null},{"id":"W2100395027","doi":"10.1016/j.humpath.2008.07.018","title":"Clinicopathologic spectrum of massive and submassive hepatic necrosis in infants and children","year":2009,"lang":"en","type":"article","venue":"Human Pathology","topic":"Liver Disease and Transplantation","field":"Medicine","cited_by":18,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hospital for Sick Children; University of Toronto; SickKids Foundation; Mount Sinai Hospital","funders":"","keywords":"Coagulative necrosis; Necrosis; Pathology; Medicine; Steatosis; Elevated alkaline phosphatase; Gastroenterology; Internal medicine; Biology; Alkaline phosphatase","score_opus":0.012239258974450025,"score_gpt":0.2814698153108657,"score_spread":0.2692305563364156,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2100395027","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9985542,0.00046604723,0.0000110162355,0.00027323927,0.000019316522,0.0002650836,0.000017767305,0.000015435977,0.00037788248],"genre_scores_gemma":[0.9990001,0.00044471445,0.00011220758,0.00034050734,0.00002586867,0.0000053507306,0.00004695858,0.0000054564325,0.000018874247],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9992481,0.00007131112,0.0002388574,0.0002284553,0.000062084066,0.00015119309],"domain_scores_gemma":[0.9996743,0.000037792488,0.00008733676,0.00012110382,0.00001732693,0.00006211538],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000111683796,0.00009894816,0.00029841805,0.0001471891,0.000032274067,0.000004301849,0.000029734323,0.00009229818,0.00002549955],"category_scores_gemma":[0.00001390907,0.00008694744,0.000028291503,0.00007014218,0.00014416789,0.000049454102,0.000012673031,0.000114756294,0.000002848666],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00016249354,0.00011090767,0.9891135,0.00003490264,0.000016030619,0.0004997646,0.0010865611,4.7806736e-7,0.0075585623,0.0006276464,0.000004534041,0.00078461925],"study_design_scores_gemma":[0.002253355,0.00093751826,0.9885256,0.000071133334,0.00017955474,0.0002326469,0.00004447727,0.00001035831,0.0017394399,0.005929666,2.895111e-7,0.000075937154],"about_ca_topic_score_codex":0.000024143212,"about_ca_topic_score_gemma":0.000029633971,"teacher_disagreement_score":0.0058191223,"about_ca_system_score_codex":0.000008995268,"about_ca_system_score_gemma":0.000017159482,"threshold_uncertainty_score":0.35456136},"labels":[],"label_agreement":null},{"id":"W2100532497","doi":"10.1016/j.humpath.2007.08.002","title":"A B-cell lymphoma–associated chromosomal translocation in a progressive transformation of germinal center","year":2008,"lang":"en","type":"article","venue":"Human Pathology","topic":"Lymphoma Diagnosis and Treatment","field":"Medicine","cited_by":10,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Centre Hospitalier Universitaire Sainte-Justine; Université de Montréal","funders":"","keywords":"BCL6; Germinal center; Mantle zone; Pathology; Follicular hyperplasia; Histiocyte; Lymph node; Lymphoma; Chromosomal translocation; Population; Biology; B cell; Medicine; Immunology; Gene; Genetics; Antibody","score_opus":0.022986455599602895,"score_gpt":0.27518189673542776,"score_spread":0.25219544113582487,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2100532497","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9969131,0.00039531622,0.00001124903,0.00013967551,0.000030366537,0.00044981838,0.000015357406,0.00002493289,0.0020202054],"genre_scores_gemma":[0.99937224,0.000074747026,0.0000779621,0.00008636805,0.000020673175,0.0001183512,0.00018831035,0.000010436599,0.000050887247],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9991042,0.00006814398,0.00034361667,0.00016570189,0.00012969918,0.00018860701],"domain_scores_gemma":[0.99964327,0.00001659101,0.00011549559,0.00011936438,0.000060892075,0.000044387423],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00007396405,0.00011317757,0.00029959506,0.0001415834,0.00005147186,0.0000018003493,0.00003776762,0.00011888234,0.00006364409],"category_scores_gemma":[0.00000752936,0.00009906295,0.000085456006,0.00011865313,0.00011052824,0.000060335726,0.0000047408084,0.000042440333,0.000013410728],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00071520725,0.029795026,0.8534724,0.00035758162,0.00013185125,0.008169108,0.042705838,0.000006432123,0.044267405,0.0009810199,0.0003841827,0.019013928],"study_design_scores_gemma":[0.019053541,0.001060505,0.9496297,0.00013930688,0.00005438851,0.0011791891,0.0001267886,0.00005329388,0.028486779,0.000048348735,0.00006945501,0.000098656565],"about_ca_topic_score_codex":0.000031105803,"about_ca_topic_score_gemma":0.000031286803,"teacher_disagreement_score":0.09615733,"about_ca_system_score_codex":0.00014656382,"about_ca_system_score_gemma":0.000081969265,"threshold_uncertainty_score":0.403967},"labels":[],"label_agreement":null},{"id":"W2102586314","doi":"10.1016/j.humpath.2010.10.011","title":"Differential expression of cell-cycle regulatory proteins defines distinct classes of follicular lymphoma","year":2011,"lang":"en","type":"article","venue":"Human Pathology","topic":"Lymphoma Diagnosis and Treatment","field":"Medicine","cited_by":10,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Cancer Care South East; Kingston General Hospital; Vancouver General Hospital; Queen's University","funders":"Health Research Board","keywords":"Follicular lymphoma; Follicular phase; Biology; Differential (mechanical device); Lymphoma; Cell biology; Cell cycle; Expression (computer science); Computational biology; Cell; Immunology; Genetics; Computer science","score_opus":0.026547200224909154,"score_gpt":0.25186950674067243,"score_spread":0.2253223065157633,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2102586314","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9939817,0.0003287993,0.000060569295,0.000008842352,0.00007396722,0.00035331864,0.000014432028,0.0000303706,0.0051479824],"genre_scores_gemma":[0.99862283,0.000020049076,0.0010121185,0.00001573068,0.000044283865,0.00008501116,0.00003474457,0.000020581181,0.00014465826],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9989713,0.00007159231,0.00035656054,0.00025583373,0.00016127851,0.0001834449],"domain_scores_gemma":[0.99915695,0.000025659518,0.00022998049,0.00044163645,0.000074270865,0.000071475275],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00004945909,0.00016015477,0.00045502814,0.000094586256,0.000053996064,0.0000018528899,0.00008540839,0.00013096858,0.00033304503],"category_scores_gemma":[0.000015680807,0.00011776251,0.00016521377,0.000052464777,0.00019968192,0.000034653818,0.00007763985,0.00003119651,0.000007449785],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00027113777,0.00461693,0.24389513,0.0003612561,0.00006170552,0.0004589282,0.0011288712,2.956115e-7,0.7428968,0.0044173696,0.00023590872,0.0016556776],"study_design_scores_gemma":[0.0021040514,0.0005476774,0.5118609,0.00008198045,0.00010952048,0.0000405193,0.000038774902,0.0000019811885,0.48437357,0.0007538663,0.000027174301,0.000059962873],"about_ca_topic_score_codex":0.00007264401,"about_ca_topic_score_gemma":0.000014524127,"teacher_disagreement_score":0.26796582,"about_ca_system_score_codex":0.000033934404,"about_ca_system_score_gemma":0.000044044777,"threshold_uncertainty_score":0.48022157},"labels":[],"label_agreement":null},{"id":"W2102727328","doi":"10.1016/j.humpath.2008.06.001","title":"Diverticular disease of the vermiform appendix: a diagnostic clue to underlying appendiceal neoplasm","year":2008,"lang":"en","type":"article","venue":"Human Pathology","topic":"Intraperitoneal and Appendiceal Malignancies","field":"Medicine","cited_by":143,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Calgary Laboratory Services; University of Alberta; University of Calgary","funders":"","keywords":"Appendix; Diverticulosis; Vermiform; Medicine; Diverticular disease; Appendicitis; Adenoma; General surgery; Carcinoma; Pathology; Radiology; Internal medicine; Biology","score_opus":0.04149041651401527,"score_gpt":0.28597371134302796,"score_spread":0.24448329482901268,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2102727328","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9959179,0.0002137857,0.00006885527,0.00087818946,0.00025956528,0.000616515,0.00002914964,0.000054028194,0.0019619886],"genre_scores_gemma":[0.9974041,0.000025517696,0.0001033553,0.0016865442,0.00010893526,0.000046218604,0.000032936932,0.000024839484,0.0005675556],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99851614,0.00007314545,0.00034714153,0.00032196875,0.0003091799,0.00043243347],"domain_scores_gemma":[0.9989828,0.00011801025,0.00009999386,0.00047336225,0.00006180089,0.0002640397],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000112103844,0.00019879466,0.00038242686,0.00009910017,0.0004237998,0.000006047932,0.00023390402,0.00009245711,0.00025574153],"category_scores_gemma":[0.00020831708,0.00013887437,0.00018675992,0.00019749269,0.00041134894,0.00004993737,0.00021415272,0.00022334828,0.00035235455],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00072082883,0.001502931,0.78641087,0.0009203479,0.0002093351,0.015223336,0.009667143,0.00015253083,0.13921602,0.038494457,0.004925702,0.0025565084],"study_design_scores_gemma":[0.0011571752,0.0004675576,0.98791933,0.00023282922,0.00018108479,0.0016616799,0.00022315333,0.000022717633,0.0037780062,0.00079513603,0.00334069,0.00022063624],"about_ca_topic_score_codex":0.00006225883,"about_ca_topic_score_gemma":0.000031370215,"teacher_disagreement_score":0.20150846,"about_ca_system_score_codex":0.000049441474,"about_ca_system_score_gemma":0.00010345962,"threshold_uncertainty_score":0.56631327},"labels":[],"label_agreement":null},{"id":"W2103738613","doi":"10.1016/j.humpath.2014.08.012","title":"Molecular characterization of a population-based series of endometrial stromal sarcomas in Kuwait","year":2014,"lang":"en","type":"article","venue":"Human Pathology","topic":"Uterine Myomas and Treatments","field":"Medicine","cited_by":18,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta; Royal Alexandra Hospital; BC Cancer Agency","funders":"","keywords":"Fluorescence in situ hybridization; Immunostaining; Endometrial stromal sarcoma; Population; Leiomyosarcoma; Biology; Immunohistochemistry; Sarcoma; Stromal cell; Pathology; Cancer research; Medicine; Genetics; Gene","score_opus":0.016028651597524306,"score_gpt":0.27048560450898035,"score_spread":0.25445695291145604,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2103738613","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9993416,0.00000870589,0.00020296496,0.000054256794,0.000047915193,0.00017327369,0.00001258536,0.000010725786,0.00014799394],"genre_scores_gemma":[0.9989616,8.198702e-7,0.0005377275,0.00003288531,0.000030929063,0.000011326987,0.0003910765,0.000010317758,0.000023269555],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9993377,0.0000765468,0.00027795002,0.00012307566,0.000088169654,0.000096558186],"domain_scores_gemma":[0.9996275,0.000020292802,0.00013665043,0.00016673234,0.000025557643,0.000023286584],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00008934689,0.00007209336,0.00030354972,0.00025456067,0.000010327609,0.0000015572367,0.000033303353,0.000059119546,0.000046072786],"category_scores_gemma":[0.00005900098,0.00006913241,0.000050101764,0.00012492335,0.00003948524,0.00002703993,0.000015018961,0.000040605788,0.0000013002558],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015651736,0.00017522016,0.46481696,0.000035110286,0.000011261716,0.000076314165,0.000051316216,0.0000031041616,0.53189015,0.0020870685,2.5981922e-7,0.0006966988],"study_design_scores_gemma":[0.0034803678,0.0011082161,0.96223426,0.000027558428,0.000031598905,0.000021262482,0.0000027785393,0.000049665065,0.03280084,0.0001609118,0.00004076755,0.000041787684],"about_ca_topic_score_codex":0.000051422478,"about_ca_topic_score_gemma":0.000013815746,"teacher_disagreement_score":0.49908933,"about_ca_system_score_codex":0.000015541314,"about_ca_system_score_gemma":0.000012579815,"threshold_uncertainty_score":0.2819138},"labels":[],"label_agreement":null},{"id":"W2106639356","doi":"10.1016/j.humpath.2005.11.019","title":"Enteropathy with loss of enteroendocrine and Paneth cells in a patient with immune dysregulation: a case of adult autoimmune enteropathy","year":2006,"lang":"en","type":"article","venue":"Human Pathology","topic":"Celiac Disease Research and Management","field":"Medicine","cited_by":34,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"St. Michael's Hospital; University of Toronto","funders":"","keywords":"Enteropathy; Intraepithelial lymphocyte; Malabsorption; Medicine; Duodenitis; Immune dysregulation; Gastroenterology; Enteroendocrine cell; Lymphocytosis; Pathology; Internal medicine; Immunology; Immune system; Disease; Endocrine system; Gastritis; Stomach","score_opus":0.005464905926048232,"score_gpt":0.23828265953612546,"score_spread":0.23281775361007723,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2106639356","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.997848,0.0005905645,0.00014142545,0.00011467326,0.000022056302,0.00072849926,0.000035313118,0.000018981904,0.0005005341],"genre_scores_gemma":[0.9991944,0.000079838304,0.00033682867,0.00004534908,0.000017704308,0.00006332886,0.000078793346,0.000023836854,0.00015992307],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9984597,0.00011755034,0.00053161767,0.000328948,0.00022842671,0.0003337724],"domain_scores_gemma":[0.9990971,0.0000222575,0.0002256737,0.00040645723,0.00016490127,0.0000836197],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00010652436,0.00019480292,0.0005212458,0.0003201848,0.000036637364,0.000007140917,0.00006121413,0.000035491965,0.000066903405],"category_scores_gemma":[0.000007981479,0.00014635346,0.000054399356,0.00015905286,0.00037545484,0.000055584045,0.00011389074,0.0001302561,0.0000018217638],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.011371618,0.007772779,0.4135871,0.0038056197,0.00036134638,0.3378101,0.004474245,0.00018112364,0.20566638,0.003846085,0.00024944302,0.010874176],"study_design_scores_gemma":[0.027867796,0.01902093,0.8730058,0.0015329089,0.00038805872,0.032636777,0.0022853205,0.00030049193,0.04174319,0.00027047095,0.000446032,0.0005022226],"about_ca_topic_score_codex":0.0006938295,"about_ca_topic_score_gemma":0.0005901372,"teacher_disagreement_score":0.4594187,"about_ca_system_score_codex":0.00004291342,"about_ca_system_score_gemma":0.000031726704,"threshold_uncertainty_score":0.59681207},"labels":[],"label_agreement":null},{"id":"W2108461358","doi":"10.1016/j.humpath.2007.03.009","title":"The Ross procedure—valvular pathology of synchronous pulmonary autograft and homograft insufficiency","year":2007,"lang":"en","type":"article","venue":"Human Pathology","topic":"Cardiac Valve Diseases and Treatments","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Toronto General Hospital; University Health Network; University of Toronto; University of Waterloo","funders":"","keywords":"Pannus; Medicine; Pulmonary insufficiency; Pulmonary valve; Pathology; Internal medicine","score_opus":0.00932120532207746,"score_gpt":0.3224094063149027,"score_spread":0.31308820099282525,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2108461358","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9846052,0.0119239325,0.00006590149,0.00009799907,0.00014835656,0.00046364535,0.0000210731,0.000060436432,0.0026134795],"genre_scores_gemma":[0.9990333,0.00030204415,0.00011163258,0.00014383867,0.00009274108,0.000034677683,0.000039972583,0.0000273161,0.00021452252],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99854344,0.000068013695,0.0003725094,0.00038079455,0.00017165422,0.00046361453],"domain_scores_gemma":[0.9990653,0.00009438357,0.00013840926,0.00044335146,0.00010728622,0.00015126547],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004373928,0.00019540127,0.0003996689,0.00012840246,0.00029633747,0.000010693399,0.00009739555,0.00015602302,0.000021292193],"category_scores_gemma":[0.00007953886,0.00013797531,0.00036741805,0.00016693621,0.00069014827,0.000029636805,0.00009755197,0.00017305887,0.000011120088],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00036318746,0.0021682752,0.9397218,0.00016870309,0.00035380418,0.0050273347,0.00074703037,0.0000018595559,0.021465536,0.004219249,0.00018218474,0.025581026],"study_design_scores_gemma":[0.0010267359,0.0012481048,0.9936541,0.000027419039,0.00039679583,0.0017849815,0.0002458313,0.0000073636625,0.00032941045,0.0005076043,0.0006501564,0.000121512945],"about_ca_topic_score_codex":0.000016891207,"about_ca_topic_score_gemma":0.000013808543,"teacher_disagreement_score":0.053932276,"about_ca_system_score_codex":0.00003548554,"about_ca_system_score_gemma":0.00006698688,"threshold_uncertainty_score":0.562647},"labels":[],"label_agreement":null},{"id":"W2111260328","doi":"10.1016/j.humpath.2014.10.003","title":"Pulmonary fibrosis in dyskeratosis congenita: report of 2 cases","year":2014,"lang":"en","type":"article","venue":"Human Pathology","topic":"Telomeres, Telomerase, and Senescence","field":"Medicine","cited_by":12,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Vancouver General Hospital; University of British Columbia; University of Saskatchewan; Royal University Hospital","funders":"","keywords":"Dyskeratosis congenita; Pulmonary fibrosis; Medicine; Pathology; Usual interstitial pneumonia; Mucocutaneous zone; Interstitial lung disease; Lung; Fibrosis; Telomere; Idiopathic pulmonary fibrosis; Telomerase; Disease; Internal medicine; Biology","score_opus":0.02736381669559082,"score_gpt":0.29352025218453426,"score_spread":0.2661564354889434,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2111260328","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99187,0.00028795388,0.00002895766,0.00017128515,0.00012336147,0.00017189048,0.000007569366,0.00004524525,0.0072937403],"genre_scores_gemma":[0.9982482,0.000033129047,0.0003928652,0.0002503004,0.00011535574,0.000021956715,0.000055319466,0.000020310868,0.00086253963],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9986269,0.00011822518,0.0005038255,0.0003439365,0.00014311326,0.00026404066],"domain_scores_gemma":[0.99906236,0.00012769346,0.00014567621,0.0004886973,0.000087626584,0.00008793215],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00031387553,0.00014471417,0.0004956767,0.00022656251,0.000051519422,0.0000039757456,0.000086404296,0.00014702682,0.00021891964],"category_scores_gemma":[0.0003143587,0.00013464021,0.000083170904,0.00017713953,0.00023820988,0.000044377037,0.000045811357,0.00016796593,0.00002584161],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013245246,0.00040811062,0.5992976,0.00020980532,0.00002136355,0.028602835,0.00055655366,0.0000013290913,0.36418143,0.0010789164,0.0005703046,0.0049393456],"study_design_scores_gemma":[0.001196919,0.0008467273,0.92014396,0.0001453815,0.00008348606,0.03213405,0.00024202792,0.000037045775,0.040345635,0.0005084455,0.004050077,0.00026624103],"about_ca_topic_score_codex":0.00013041841,"about_ca_topic_score_gemma":0.000103149985,"teacher_disagreement_score":0.3238358,"about_ca_system_score_codex":0.000026075733,"about_ca_system_score_gemma":0.000040526967,"threshold_uncertainty_score":0.5490469},"labels":[],"label_agreement":null},{"id":"W2111287738","doi":"10.1016/j.humpath.2014.10.030","title":"Well-differentiated hepatocellular neoplasm of uncertain malignant potential—reply","year":2014,"lang":"en","type":"letter","venue":"Human Pathology","topic":"Amyloidosis: Diagnosis, Treatment, Outcomes","field":"Biochemistry, Genetics and Molecular Biology","cited_by":7,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Queen Elizabeth II Health Sciences Centre; Dalhousie University; Hospital for Sick Children","funders":"","keywords":"Hepatocellular carcinoma; Neoplasm; Pathology; Medicine; Cancer research","score_opus":0.01758217066931416,"score_gpt":0.2518925858908431,"score_spread":0.23431041522152896,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2111287738","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.948559,0.0021217605,0.00075480406,0.044399984,0.0010656149,0.0011413333,0.00030198274,0.000114361384,0.0015411471],"genre_scores_gemma":[0.7673611,0.00053268886,0.00033013916,0.2136168,0.0017849482,0.00027188516,0.009334627,0.0002599662,0.0065078484],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99603075,0.00061357935,0.00088551565,0.001320924,0.0003218658,0.0008273796],"domain_scores_gemma":[0.9972502,0.00004788331,0.0008263398,0.0015890496,0.00018444352,0.00010210006],"candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.00022878389,0.00081430585,0.0011370826,0.00024975516,0.00015522534,0.000030008247,0.00075225235,0.001843472,0.0003758369],"category_scores_gemma":[0.000060309438,0.00075834687,0.00062266306,0.000095062496,0.00042029464,0.0000034814134,0.00036151905,0.00069938565,0.00017763753],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000044478536,0.0002425727,0.01654392,0.0003219864,0.0008356099,0.0024971622,0.0000538086,0.000023497447,0.20805265,0.00006766678,0.77118415,0.00013249608],"study_design_scores_gemma":[0.0030364862,0.0015678585,0.004930822,0.00017131862,0.0010691102,0.00079708017,0.00003297921,0.000047410478,0.16011402,0.00044393388,0.8261337,0.0016552506],"about_ca_topic_score_codex":0.000111802314,"about_ca_topic_score_gemma":0.000024743866,"teacher_disagreement_score":0.18119791,"about_ca_system_score_codex":0.000049552593,"about_ca_system_score_gemma":0.00009419483,"threshold_uncertainty_score":0.99948674},"labels":[],"label_agreement":null},{"id":"W2112522586","doi":"10.1016/j.humpath.2014.02.017","title":"Validation of a histopathologic classification scheme for antineutrophil cytoplasmic antibody–associated glomerulonephritis","year":2014,"lang":"en","type":"article","venue":"Human Pathology","topic":"Vasculitis and related conditions","field":"Medicine","cited_by":35,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Foothills Medical Centre","funders":"","keywords":"Anti-neutrophil cytoplasmic antibody; Glomerulonephritis; Antibody; Cytoplasm; Pathology; Medicine; Classification scheme; Immunology; Biology; Vasculitis; Internal medicine; Kidney; Computer science; Disease; Information retrieval; Genetics","score_opus":0.02803601906964118,"score_gpt":0.3056204629711337,"score_spread":0.2775844439014925,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2112522586","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9935561,0.00013703687,0.002632037,0.00056944654,0.00015756975,0.00041175194,0.00004755461,0.0000996487,0.0023888831],"genre_scores_gemma":[0.9961737,0.00007787659,0.0015383495,0.00015251245,0.00009854006,0.00006313607,0.0014061821,0.000023697852,0.00046603094],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9988106,0.00012119869,0.00041868747,0.00030356186,0.00011613634,0.00022980782],"domain_scores_gemma":[0.9990651,0.00006101688,0.0002770677,0.00029434683,0.00024613467,0.000056329165],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00034510333,0.00013113164,0.00040137855,0.00019421015,0.00015929884,0.000006317396,0.00007208371,0.00028439963,0.00009852413],"category_scores_gemma":[0.0002532134,0.00012396212,0.00017528761,0.00015500702,0.00018150712,0.000046369412,0.000018795628,0.0001681264,0.000025322986],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000027394595,0.00026432445,0.017295917,0.000089865534,0.00003470305,0.000025212736,0.00010597854,0.0000032059797,0.96017814,0.02086164,0.0005501142,0.00056351785],"study_design_scores_gemma":[0.008222623,0.0022983414,0.9496896,0.0002407677,0.0004756101,0.0008109772,0.0000822979,0.00097301876,0.025596157,0.008109159,0.0031342385,0.00036717148],"about_ca_topic_score_codex":0.0000037475609,"about_ca_topic_score_gemma":0.0000014042979,"teacher_disagreement_score":0.934582,"about_ca_system_score_codex":0.000051205323,"about_ca_system_score_gemma":0.000030822186,"threshold_uncertainty_score":0.5055029},"labels":[],"label_agreement":null},{"id":"W2114182701","doi":"10.1016/j.humpath.2005.04.008","title":"Expression of protease-activated receptors 1 and 2 in melanocytic nevi and malignant melanoma","year":2005,"lang":"en","type":"article","venue":"Human Pathology","topic":"Blood Coagulation and Thrombosis Mechanisms","field":"Medicine","cited_by":68,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"Ministero dell’Istruzione, dell’Università e della Ricerca","keywords":"Melanoma; Immunohistochemistry; Pathology; Melanocytic nevus; Nevus; Biology; Cancer research; Molecular biology; Medicine","score_opus":0.031633185996008874,"score_gpt":0.2864621275930594,"score_spread":0.2548289415970505,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2114182701","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9986094,0.00024447482,0.000029116807,0.00023141876,0.000028699635,0.00031274545,0.0000012939054,0.000022580369,0.00052025553],"genre_scores_gemma":[0.9983828,0.000031931708,0.0012174209,0.00013272256,0.00002853411,0.000020740701,0.000009032487,0.000011627789,0.00016517675],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9992982,0.00008231101,0.00022074608,0.00020175408,0.00007046571,0.00012649508],"domain_scores_gemma":[0.99968195,0.000017848422,0.000077604156,0.00013732257,0.00002251831,0.00006278291],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014903788,0.00009156828,0.00027363165,0.00013536312,0.00003258736,0.0000032301223,0.00002508975,0.000111424786,0.00018754147],"category_scores_gemma":[0.000025644173,0.00007614006,0.000017014676,0.00006360648,0.00007718437,0.000044366025,0.000037982973,0.000097922384,0.000003951948],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000700662,0.00010607438,0.0145000825,0.000052033236,0.0000052562536,0.000037140897,0.0005106557,6.228557e-7,0.98147327,0.0010471509,0.000031671716,0.0021659913],"study_design_scores_gemma":[0.0027815541,0.00057693315,0.16929999,0.00021878864,0.000034587378,0.00025489935,0.00016945587,0.00005474097,0.8252587,0.0007125519,0.00051909895,0.000118756485],"about_ca_topic_score_codex":0.00000643468,"about_ca_topic_score_gemma":0.000012032951,"teacher_disagreement_score":0.15621461,"about_ca_system_score_codex":0.000015971329,"about_ca_system_score_gemma":0.000014035026,"threshold_uncertainty_score":0.31049016},"labels":[],"label_agreement":null},{"id":"W2115533722","doi":"10.1053/hupa.2001.20900","title":"Transitional cell carcinoma of the endometrium associated with a benign ovarian Brenner tumor: A case report","year":2001,"lang":"en","type":"article","venue":"Human Pathology","topic":"Ovarian cancer diagnosis and treatment","field":"Medicine","cited_by":17,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval; Centre hospitalier universitaire de Québec","funders":"","keywords":"Cytokeratin; Endometrium; Pathology; Immunostaining; Carcinoma; Clear cell carcinoma; Immunohistochemistry; Ovary; Medicine; Biology; Internal medicine","score_opus":0.021336461749364544,"score_gpt":0.2518469042250313,"score_spread":0.23051044247566677,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2115533722","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9903062,0.00014182678,0.00004659088,0.00077631517,0.0000869115,0.00036235177,0.000058217676,0.000020573172,0.008200997],"genre_scores_gemma":[0.9984929,0.000002334299,0.0001370086,0.0003911854,0.00008438657,0.00006858395,0.00006913911,0.000021595031,0.0007328415],"study_design_codex":"case_report","study_design_gemma":"observational","domain_scores_codex":[0.99885815,0.000105211715,0.00030663592,0.00030131364,0.00019721115,0.00023146947],"domain_scores_gemma":[0.99911743,0.00007693795,0.0002020838,0.0004087455,0.00011561533,0.00007921146],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00020886431,0.00014599926,0.00034667176,0.000117907286,0.0001218104,0.0000054355114,0.00005561562,0.000078566874,0.00058343407],"category_scores_gemma":[0.00003055794,0.000093585106,0.00013468493,0.00023184947,0.00015430436,0.000022708451,0.000018123068,0.0001569055,0.0000055649407],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001738503,0.0016195724,0.42027995,0.000029177318,0.0001329373,0.5732349,0.00076402375,0.00000795501,0.0021061855,0.0007541666,0.0007102767,0.00018700349],"study_design_scores_gemma":[0.006517876,0.0010653232,0.73749745,0.0000423534,0.00049702195,0.2511023,0.00011713317,0.000007282283,0.00247451,0.00013716488,0.00041699805,0.0001245885],"about_ca_topic_score_codex":0.00020598917,"about_ca_topic_score_gemma":0.0003967347,"teacher_disagreement_score":0.32213262,"about_ca_system_score_codex":0.00010840439,"about_ca_system_score_gemma":0.00014007291,"threshold_uncertainty_score":0.6388194},"labels":[],"label_agreement":null},{"id":"W2116278745","doi":"10.1016/j.humpath.2015.06.015","title":"Risk factor analysis of recurrence in low-grade endometrial adenocarcinoma","year":2015,"lang":"en","type":"article","venue":"Human Pathology","topic":"Endometrial and Cervical Cancer Treatments","field":"Medicine","cited_by":36,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Ottawa","funders":"","keywords":"Medicine; Lymphovascular invasion; Grading (engineering); Univariate analysis; Proportional hazards model; Endometrial cancer; Adenocarcinoma; Hysterectomy; Pathology; Multivariate analysis; Radiology; Oncology; Cancer; Metastasis; Internal medicine","score_opus":0.08537570065262923,"score_gpt":0.3511973100387138,"score_spread":0.26582160938608457,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2116278745","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99695575,0.0013406087,0.00004438057,0.0000395641,0.0002179455,0.00023241909,0.00011924032,0.000019399404,0.0010306922],"genre_scores_gemma":[0.999399,0.00006729544,0.00016676771,0.000053620333,0.00012215783,0.000021259544,0.00006391041,0.000009371078,0.000096588956],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99853325,0.00021457585,0.0004367042,0.000316104,0.0002554077,0.00024398052],"domain_scores_gemma":[0.99903536,0.00019473428,0.00018981555,0.00031706743,0.00008985299,0.00017314173],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00030044722,0.00013614281,0.00078676984,0.0013239654,0.00002168397,0.000003934681,0.00011166923,0.0001282526,0.0004309618],"category_scores_gemma":[0.0007870898,0.00010942365,0.00021040688,0.0022142164,0.00011188017,0.0000339766,0.000049171267,0.00020795206,0.00002501744],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00053398573,0.00043486635,0.99337286,0.000019729414,0.0003374309,0.0002677989,0.0007646679,0.000011087911,0.0005171588,0.00013438798,0.000026663176,0.003579381],"study_design_scores_gemma":[0.008654886,0.0012800485,0.98720086,0.000018469944,0.0009753409,0.000012490417,0.00010199984,0.000026579402,0.001154973,0.0004244218,0.00005593562,0.00009401908],"about_ca_topic_score_codex":0.0003203694,"about_ca_topic_score_gemma":0.00022606441,"teacher_disagreement_score":0.0081209,"about_ca_system_score_codex":0.00012580253,"about_ca_system_score_gemma":0.000060843013,"threshold_uncertainty_score":0.47187296},"labels":[],"label_agreement":null},{"id":"W2116893704","doi":"10.1016/j.humpath.2007.10.003","title":"Chronic advanced gastric cancer: clinicopathologic analysis of survival data","year":2008,"lang":"en","type":"article","venue":"Human Pathology","topic":"Gastric Cancer Management and Outcomes","field":"Medicine","cited_by":8,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Vancouver General Hospital; University of British Columbia; BC Cancer Agency","funders":"","keywords":"Medicine; Cancer; Eosinophil; Stage (stratigraphy); Gastroenterology; Internal medicine; Fibrosis; Pathology; Lymphatic system; Lymphovascular invasion; Metastasis; Biology","score_opus":0.11206569226045271,"score_gpt":0.3838062620077252,"score_spread":0.2717405697472725,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2116893704","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.993097,0.0023084988,0.00038820217,0.0002457113,0.00032771475,0.00025233795,0.000090344474,0.000075792515,0.0032144166],"genre_scores_gemma":[0.99465925,0.0017212614,0.0006059988,0.00020633248,0.00025276165,0.0000227226,0.0005093811,0.000017589238,0.0020046951],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9982232,0.00009505233,0.00053425593,0.0005626869,0.00023486924,0.00034994198],"domain_scores_gemma":[0.9982174,0.00007228485,0.00028544842,0.0012634442,0.000082156505,0.00007927795],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0003464197,0.0001781817,0.0009570082,0.00060985144,0.00010108561,0.000003017701,0.00040733468,0.00009650338,0.00093352556],"category_scores_gemma":[0.00006952352,0.0001574917,0.00020165382,0.0011397029,0.00028251144,0.00007434937,0.00031924888,0.00019831011,0.00001854608],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000621765,0.00012558505,0.9835792,0.000054951863,0.00048518903,0.00077874295,0.00014040053,0.00016561696,0.0025712666,0.00021062643,0.0009542023,0.010872037],"study_design_scores_gemma":[0.001859271,0.00053240196,0.9919889,0.00001327689,0.0022245452,0.00007260498,0.00006248764,0.00017304733,0.000046617188,0.000018107103,0.0028858988,0.00012282208],"about_ca_topic_score_codex":0.00005270213,"about_ca_topic_score_gemma":0.00029382057,"teacher_disagreement_score":0.010749215,"about_ca_system_score_codex":0.0000962589,"about_ca_system_score_gemma":0.000117418094,"threshold_uncertainty_score":0.99997973},"labels":[],"label_agreement":null},{"id":"W2120949839","doi":"10.1016/j.humpath.2015.02.008","title":"Ovarian embryonal rhabdomyosarcoma is a rare manifestation of the DICER1 syndrome","year":2015,"lang":"en","type":"article","venue":"Human Pathology","topic":"Congenital Diaphragmatic Hernia Studies","field":"Medicine","cited_by":54,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Centre Hospitalier Universitaire Sainte-Justine; McGill University Health Centre; University of Toronto; SickKids Foundation; Hospital for Sick Children; McGill University; Jewish General Hospital","funders":"Canadian Institutes of Health Research","keywords":"Embryonal rhabdomyosarcoma; Rhabdomyosarcoma; Germline mutation; Somatic cell; Germline; Biology; Cancer research; Medicine; Sarcoma; Pathology; Mutation; Genetics; Gene","score_opus":0.04769197159370393,"score_gpt":0.29809893301819373,"score_spread":0.2504069614244898,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2120949839","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9839824,0.00020815672,0.000035911835,0.0015835359,0.00017572689,0.00033175567,0.000023937275,0.00003357918,0.013625013],"genre_scores_gemma":[0.9964699,0.00000234515,0.00029361216,0.00068948086,0.000047619662,0.00002871437,0.0000124831895,0.000017164499,0.002438664],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9989373,0.0001179227,0.00030503154,0.00019086868,0.00026008635,0.00018877491],"domain_scores_gemma":[0.9992012,0.000054390308,0.00012352929,0.000380772,0.00015760491,0.00008254427],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00023950469,0.00012237176,0.00031720134,0.00008005674,0.000076595046,0.000005201745,0.00012678812,0.00008435381,0.00028586463],"category_scores_gemma":[0.00020590345,0.00008687795,0.00009455854,0.00012988439,0.00023122857,0.000036898375,0.0001344362,0.0001481589,0.000104278806],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00061900355,0.0017465095,0.76430386,0.001447935,0.0010705888,0.010587946,0.0821891,0.00000507204,0.044967793,0.035820846,0.0423476,0.014893761],"study_design_scores_gemma":[0.0018022037,0.0004000518,0.9871497,0.00007157429,0.00014394092,0.0034065542,0.001017232,0.000024401315,0.00024840733,0.004344313,0.0012850857,0.00010651155],"about_ca_topic_score_codex":0.00002692527,"about_ca_topic_score_gemma":0.000050084014,"teacher_disagreement_score":0.22284587,"about_ca_system_score_codex":0.000046888545,"about_ca_system_score_gemma":0.0000901658,"threshold_uncertainty_score":0.354278},"labels":[],"label_agreement":null},{"id":"W2121572373","doi":"10.1016/j.humpath.2011.12.011","title":"Infant brain tumors: a neuropathologic population-based institutional reappraisal","year":2012,"lang":"en","type":"article","venue":"Human Pathology","topic":"Chromatin Remodeling and Cancer","field":"Biochemistry, Genetics and Molecular Biology","cited_by":14,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"BC Children's Hospital; University of British Columbia","funders":"","keywords":"Medulloblastoma; Atypical teratoid rhabdoid tumor; Primitive neuroectodermal tumor; Pathology; Ependymoma; Malignancy; Medicine; Craniopharyngioma; Teratoma; Immunohistochemistry; Radiology","score_opus":0.01895937580022587,"score_gpt":0.2956640907125078,"score_spread":0.27670471491228193,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2121572373","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99496514,0.00036537493,0.0023482826,0.00015089642,0.00025281875,0.00010111616,0.000018953611,0.00004378245,0.0017536562],"genre_scores_gemma":[0.99607134,0.0000033879867,0.0010388537,0.0015633065,0.0005984163,0.000034971075,0.000506708,0.00001963179,0.00016336296],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9989132,0.00014912813,0.00023054991,0.00028676575,0.00010159359,0.00031876174],"domain_scores_gemma":[0.9994527,0.000017821434,0.000089329544,0.0003157021,0.000039914783,0.000084545776],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002997229,0.00015005941,0.00014672853,0.000054369335,0.00017321516,0.00001095359,0.00013147717,0.00015477354,0.000068437585],"category_scores_gemma":[0.00018329974,0.00014202211,0.00008319954,0.000057327128,0.00011163487,0.00000525436,0.00006241474,0.00011541354,0.00003083868],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006013041,0.00022883575,0.18765871,0.00003271218,0.00001212566,0.00005751497,0.00010901382,0.0015791737,0.80153286,0.0050223535,0.0025253226,0.0011812253],"study_design_scores_gemma":[0.0018770231,0.0006699297,0.9376035,0.000041017927,0.00003343792,0.00100526,0.000038152662,0.0006328366,0.021375058,0.00040556016,0.035569016,0.0007492414],"about_ca_topic_score_codex":0.000026923022,"about_ca_topic_score_gemma":0.000018663917,"teacher_disagreement_score":0.7801578,"about_ca_system_score_codex":0.000012508196,"about_ca_system_score_gemma":0.00006192845,"threshold_uncertainty_score":0.57914937},"labels":[],"label_agreement":null},{"id":"W2121800966","doi":"10.1016/j.humpath.2012.04.009","title":"A position paper on standardizing the nonneoplastic kidney biopsy report","year":2012,"lang":"en","type":"article","venue":"Human Pathology","topic":"Renal Diseases and Glomerulopathies","field":"Medicine","cited_by":32,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba","funders":"American Society of Nephrology","keywords":"Biopsy; Renal pathology; Medicine; Pathology; Renal biopsy; Kidney; Surgical pathology; Internal medicine","score_opus":0.01797021515749151,"score_gpt":0.29954759548934795,"score_spread":0.2815773803318564,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2121800966","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9769576,0.0006132545,0.00018738664,0.002945265,0.0004103658,0.00021504518,0.00003272072,0.00006630587,0.018572057],"genre_scores_gemma":[0.99384385,0.000021672024,0.00008737341,0.0046680793,0.00063193194,0.0000284239,0.00009791746,0.000017897873,0.0006028789],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99903905,0.00008321859,0.00021082314,0.00017746145,0.00019400538,0.00029545132],"domain_scores_gemma":[0.9992575,0.00005111068,0.00008494447,0.0003441629,0.000057831774,0.00020442603],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003248077,0.00011980132,0.00019060362,0.00006900281,0.00020580925,0.000019002235,0.000046209265,0.000083332125,0.0003585936],"category_scores_gemma":[0.00031754037,0.00007316607,0.000105191,0.000077889956,0.00012386605,0.000090115944,0.00003189377,0.00018801929,0.00013697792],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0020126055,0.0021462666,0.2795782,0.00076532335,0.00038289352,0.03247641,0.0065827947,0.000011553875,0.4739934,0.10508207,0.08846943,0.008499046],"study_design_scores_gemma":[0.0012264332,0.0007628595,0.9448591,0.00025925244,0.0003101448,0.018449817,0.00030467703,0.0000044530457,0.001091034,0.0013442315,0.031173678,0.00021435072],"about_ca_topic_score_codex":0.0000064955466,"about_ca_topic_score_gemma":0.0000011429872,"teacher_disagreement_score":0.6652809,"about_ca_system_score_codex":0.000041174255,"about_ca_system_score_gemma":0.00004302499,"threshold_uncertainty_score":0.39263484},"labels":[],"label_agreement":null},{"id":"W2122507855","doi":"10.1016/j.humpath.2015.08.010","title":"Loss of the retinoblastoma tumor suppressor correlates with improved outcome in patients with lung adenocarcinoma treated with surgery and chemotherapy","year":2015,"lang":"en","type":"article","venue":"Human Pathology","topic":"Cancer-related Molecular Pathways","field":"Medicine","cited_by":13,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"London Health Sciences Centre; Western University","funders":"Canadian Institutes of Health Research","keywords":"Retinoblastoma protein; Adenocarcinoma; Hazard ratio; Chemotherapy; Retinoblastoma; Medicine; Oncology; Lung cancer; E2F; Cancer research; Internal medicine; Cancer; Immunohistochemistry; Confidence interval; Pathology; Biology; Cell cycle","score_opus":0.012307726974325596,"score_gpt":0.22891142094432781,"score_spread":0.21660369397000223,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2122507855","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99859977,0.0001633505,0.000020557127,0.00012650229,0.000042242777,0.0008633102,0.000016280968,0.000040528223,0.00012747246],"genre_scores_gemma":[0.999377,0.0000018012114,0.00013147267,0.00023171256,0.000016868153,0.00004281186,0.0000302073,0.00006798566,0.00010012538],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99853635,0.000119864926,0.0003604593,0.00040447098,0.0002456568,0.00033319884],"domain_scores_gemma":[0.99882305,0.000054373068,0.00028803403,0.000514891,0.00019861551,0.000121050114],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00018372206,0.00026324383,0.00062475493,0.0001659999,0.00004601092,0.000007938218,0.00009696534,0.00013023778,0.000018795296],"category_scores_gemma":[0.000045916404,0.00014900173,0.00004576238,0.00027503574,0.00051727606,0.000049145707,0.00004373437,0.0003297464,0.0000011584857],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0037561909,0.0002220379,0.99253243,0.0000681215,0.00006918193,0.00041408703,0.00072712754,0.000008747727,0.0020521746,0.000012351838,0.00008535784,0.000052173516],"study_design_scores_gemma":[0.011238712,0.0025515168,0.9802017,0.00024481065,0.00014684036,0.0005308605,0.00009174914,0.00006908594,0.0047125192,0.0000061040564,0.000013427727,0.00019267236],"about_ca_topic_score_codex":0.00007123625,"about_ca_topic_score_gemma":0.00013657485,"teacher_disagreement_score":0.012330746,"about_ca_system_score_codex":0.00010035647,"about_ca_system_score_gemma":0.00013911504,"threshold_uncertainty_score":0.6076114},"labels":[],"label_agreement":null},{"id":"W2126715921","doi":"10.1016/j.humpath.2006.08.028","title":"Patterns of recurrent hepatitis C after liver transplantation in a recent cohort of patients","year":2006,"lang":"en","type":"article","venue":"Human Pathology","topic":"Hepatitis C virus research","field":"Medicine","cited_by":55,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Queen Elizabeth II Health Sciences Centre; Dalhousie University","funders":"","keywords":"Liver transplantation; Medicine; Cohort; Hepatitis C; Internal medicine; Transplantation; Gastroenterology","score_opus":0.02086527674770218,"score_gpt":0.3027587517185864,"score_spread":0.28189347497088424,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2126715921","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9973315,0.00012265689,0.00007600487,0.000025868258,0.000056798486,0.00049895083,0.00016916037,0.000008785225,0.0017102947],"genre_scores_gemma":[0.99778926,0.0014957056,0.00011618652,0.000036889716,0.000026011212,0.00007863186,0.00037237103,0.000014912549,0.00007001169],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99865985,0.00015931264,0.00048226974,0.00021006324,0.00028092493,0.00020759313],"domain_scores_gemma":[0.9994545,0.000029863942,0.000100995465,0.00019465358,0.00018105328,0.00003893496],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00018568881,0.00009591853,0.00031446814,0.00026266897,0.0000121682515,0.0000017031924,0.000056906658,0.00010121047,0.00075872405],"category_scores_gemma":[0.000027871285,0.00009379537,0.00005089546,0.00011642447,0.0000699111,0.000036301582,0.000020308324,0.00014886897,0.000014386817],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00020768447,0.00053853233,0.9890416,0.00033023464,0.000008005712,0.0005458407,0.0004328689,7.3962684e-7,0.0010487387,0.00008464622,0.0000649772,0.0076961084],"study_design_scores_gemma":[0.0015187146,0.0005971462,0.9945539,0.0001443711,0.000030911433,0.000009540079,0.000004462973,0.000013309115,0.0026732527,0.000067920024,0.00031832472,0.000068145884],"about_ca_topic_score_codex":0.0013997534,"about_ca_topic_score_gemma":0.0052569197,"teacher_disagreement_score":0.0076279626,"about_ca_system_score_codex":0.000073894735,"about_ca_system_score_gemma":0.000032781812,"threshold_uncertainty_score":0.83074963},"labels":[],"label_agreement":null},{"id":"W2127657369","doi":"10.1016/j.humpath.2012.08.007","title":"YWHAE-FAM22 endometrial stromal sarcoma: diagnosis by reverse transcription–polymerase chain reaction in formalin-fixed, paraffin-embedded tumor","year":2012,"lang":"en","type":"article","venue":"Human Pathology","topic":"Uterine Myomas and Treatments","field":"Medicine","cited_by":44,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"BC Cancer Agency; University of British Columbia; Vancouver General Hospital","funders":"","keywords":"Endometrial stromal sarcoma; Stromal cell; Cancer research; Fluorescence in situ hybridization; Reverse transcription polymerase chain reaction; Sarcoma; Biology; Pathology; Medicine; Gene expression; Gene","score_opus":0.029079345604977,"score_gpt":0.2964315901558443,"score_spread":0.2673522445508673,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2127657369","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99666613,0.00073568826,0.00004841806,0.000411333,0.0005718705,0.00070085895,0.000058139445,0.000083037296,0.0007245183],"genre_scores_gemma":[0.99688643,0.00006739862,0.00047884576,0.00046845118,0.00045845163,0.00041037926,0.00037569136,0.00003901587,0.0008153394],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9980549,0.00019890825,0.0005114045,0.00035763858,0.00021154362,0.0006655958],"domain_scores_gemma":[0.99916816,0.000073034316,0.00015270553,0.00033487033,0.000030003794,0.00024123314],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0003500196,0.0002836074,0.00055460614,0.0003963726,0.00012068562,0.0000123333075,0.000085062784,0.00016227977,0.0007117806],"category_scores_gemma":[0.00007168257,0.00026255916,0.00016953921,0.000261765,0.00009947516,0.00027596735,0.00003511374,0.00029448734,0.00017949015],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0018742022,0.0062464424,0.37006012,0.00012881083,0.00018641666,0.0029067635,0.0022083886,6.187041e-7,0.6038232,0.0018919928,0.005305199,0.005367871],"study_design_scores_gemma":[0.08922328,0.008915437,0.6314168,0.00027432357,0.0012597352,0.005790208,0.001226349,0.00005204014,0.21237294,0.0003521816,0.047504045,0.0016126524],"about_ca_topic_score_codex":0.00017748108,"about_ca_topic_score_gemma":0.000065199936,"teacher_disagreement_score":0.39145023,"about_ca_system_score_codex":0.00015930136,"about_ca_system_score_gemma":0.000027573955,"threshold_uncertainty_score":0.99998266},"labels":[],"label_agreement":null},{"id":"W2129392545","doi":"10.1016/j.humpath.2009.02.004","title":"Evaluation of p16INK4a, minichromosome maintenance protein 2, DNA topoisomerase IIα, ProEx C, and p16INK4a/ProEx C in cervical squamous intraepithelial lesions","year":2009,"lang":"en","type":"letter","venue":"Human Pathology","topic":"Cervical Cancer and HPV Research","field":"Medicine","cited_by":4,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Centre Hospitalier Universitaire de Sherbrooke","funders":"","keywords":"Minichromosome; Minichromosome maintenance; Cancer research; Topoisomerase; Biology; Molecular biology; DNA; DNA replication; Eukaryotic DNA replication; Genetics","score_opus":0.06379583406965643,"score_gpt":0.35920579369046596,"score_spread":0.2954099596208095,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2129392545","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.76888186,0.0019307329,0.000014341577,0.21319653,0.00021258679,0.005779206,0.00015930313,0.000089354755,0.009736117],"genre_scores_gemma":[0.9291617,0.00010810305,0.0002696495,0.06326254,0.0028768613,0.00095164456,0.000641139,0.00012283148,0.002605532],"study_design_codex":"design_other","study_design_gemma":"observational","domain_scores_codex":[0.9942248,0.0010424656,0.0010812293,0.0011097392,0.0015831154,0.00095866004],"domain_scores_gemma":[0.99754775,0.0001669054,0.0003081626,0.0008755559,0.0008962476,0.00020537943],"candidate_categories":["metaepi_narrow","research_integrity","insufficient_payload"],"consensus_categories":["research_integrity"],"category_scores_codex":[0.0021177894,0.0005178717,0.0013758417,0.00069121475,0.00012126642,0.00002744113,0.0003451053,0.0014162814,0.0039350926],"category_scores_gemma":[0.00081670354,0.00045208837,0.00021204035,0.00036768563,0.0006828959,0.00007893818,0.00019683228,0.0030492307,0.000046669702],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.003027892,0.0040509645,0.0035337408,0.009577922,0.0003602438,0.023099959,0.004680047,0.000009771075,0.0828129,0.0015147147,0.40412542,0.46320644],"study_design_scores_gemma":[0.05634166,0.019847447,0.6776119,0.002756492,0.0030309814,0.0040372573,0.0005051033,0.0010441758,0.012211426,0.046984397,0.17185178,0.0037773848],"about_ca_topic_score_codex":0.0001573354,"about_ca_topic_score_gemma":0.00049488165,"teacher_disagreement_score":0.67407817,"about_ca_system_score_codex":0.0004767439,"about_ca_system_score_gemma":0.00073265063,"threshold_uncertainty_score":0.9998801},"labels":[],"label_agreement":null},{"id":"W2130377161","doi":"10.1016/j.humpath.2003.09.019","title":"HMB-45, S-100, NK1/C3, and MART-1 in metastatic melanoma","year":2004,"lang":"en","type":"article","venue":"Human Pathology","topic":"Cutaneous Melanoma Detection and Management","field":"Medicine","cited_by":103,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Health Sciences Centre; Sunnybrook Health Science Centre","funders":"","keywords":"Staining; Pathology; Immunohistochemistry; HMB-45; Histiocyte; Melanoma; Lymph node; Medicine; Lymph","score_opus":0.02594357670533295,"score_gpt":0.2890434952917948,"score_spread":0.26309991858646187,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2130377161","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98716325,0.00026053464,0.0001787233,0.00086990785,0.00015007576,0.00033602546,0.0000021543876,0.000068918605,0.010970442],"genre_scores_gemma":[0.99504477,0.000038697726,0.00075827236,0.0010367064,0.000056131874,0.000030214582,0.000012495653,0.000018390472,0.0030042962],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99909693,0.00005437843,0.00023355515,0.00028150526,0.00009679361,0.00023686474],"domain_scores_gemma":[0.99959946,0.000018766432,0.000048633956,0.0002266489,0.000017026377,0.00008948442],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00018023906,0.00012747651,0.00028262526,0.0002604323,0.000060399263,0.000011263492,0.00004395291,0.00006204936,0.00032985053],"category_scores_gemma":[0.000030258045,0.00011840064,0.000041347885,0.00010946825,0.00009977756,0.000028036493,0.000056969486,0.00017114576,0.00013597416],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0019049708,0.004839155,0.09898247,0.0018388425,0.00072390324,0.19089927,0.016487636,0.00023183986,0.375214,0.1923595,0.00885348,0.107664905],"study_design_scores_gemma":[0.02655945,0.007146145,0.7767438,0.0002907748,0.0006282786,0.042070698,0.002778816,0.0001040256,0.0062491163,0.036341954,0.09991979,0.0011671393],"about_ca_topic_score_codex":0.000076121265,"about_ca_topic_score_gemma":0.0005089731,"teacher_disagreement_score":0.6777614,"about_ca_system_score_codex":0.0000701881,"about_ca_system_score_gemma":0.000020527508,"threshold_uncertainty_score":0.48282382},"labels":[],"label_agreement":null},{"id":"W2132126144","doi":"10.1016/j.humpath.2015.01.014","title":"Prognostic significance of TIMP-2, MMP-2, and MMP-9 on high-grade serous ovarian carcinoma using digital image analysis","year":2015,"lang":"en","type":"article","venue":"Human Pathology","topic":"Protease and Inhibitor Mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":22,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Centre Hospitalier de l’Université de Montréal; Université Laval; Université de Montréal; Hôpital du Saint-Sacrement; Hôtel-Dieu de Québec","funders":"Canadian Institutes of Health Research","keywords":"Hazard ratio; Tissue microarray; Medicine; Serous carcinoma; Oncology; Immunohistochemistry; Internal medicine; Proportional hazards model; Ovarian carcinoma; Serous fluid; Cancer; Ovarian cancer; Pathology; Confidence interval","score_opus":0.02620437804541649,"score_gpt":0.2622536952644344,"score_spread":0.23604931721901795,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2132126144","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99602705,0.00020116761,0.0029604465,0.000025700847,0.00007059559,0.00023126439,0.00007690654,0.00001401637,0.00039287837],"genre_scores_gemma":[0.9981133,0.000003281037,0.001323273,0.00008403967,0.00015427922,0.000018570705,0.00017789664,0.000022704764,0.0001026698],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9988326,0.00009831173,0.00024563159,0.00044623803,0.00012039299,0.0002568457],"domain_scores_gemma":[0.99924225,0.00001075092,0.00014428211,0.00038085438,0.000097084136,0.0001247601],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00016161439,0.00018161573,0.0002930123,0.00012340558,0.00006665612,0.00002856641,0.00013686164,0.00017555534,0.000009331439],"category_scores_gemma":[0.00008075472,0.00017527645,0.000089094996,0.00014373266,0.00016962433,0.000009900936,0.00011387591,0.00009350558,0.0000052924283],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000615552,0.00012782558,0.009944178,0.000017300334,0.00009057785,0.000107471074,0.00009139995,0.000033616932,0.98876333,0.000506531,0.00011532282,0.00014087188],"study_design_scores_gemma":[0.0015804856,0.002409064,0.016976964,0.000017165878,0.00040725752,0.00013670904,0.00013881015,0.0002583067,0.9749184,0.0024837535,0.0002186683,0.00045437863],"about_ca_topic_score_codex":0.000046632245,"about_ca_topic_score_gemma":0.000014026702,"teacher_disagreement_score":0.013844913,"about_ca_system_score_codex":0.000016527008,"about_ca_system_score_gemma":0.000057353955,"threshold_uncertainty_score":0.7147566},"labels":[],"label_agreement":null},{"id":"W2133406893","doi":"10.1016/j.humpath.2014.03.016","title":"Aberrant expression of neuroendocrine markers in angiosarcoma: a potential diagnostic pitfall","year":2014,"lang":"en","type":"article","venue":"Human Pathology","topic":"Vascular Tumors and Angiosarcomas","field":"Medicine","cited_by":37,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"","keywords":"Chromogranin A; Synaptophysin; CD117; Pathology; CD31; Immunohistochemistry; CD99; Neuroendocrine differentiation; CD34; Angiosarcoma; Medicine; Biology; Internal medicine; Vimentin; Cancer; Prostate cancer","score_opus":0.009602879089621024,"score_gpt":0.24752196526849224,"score_spread":0.23791908617887123,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2133406893","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9975364,0.00031299723,0.0002871758,0.000334093,0.00012319679,0.00023015472,0.0000026355033,0.00003395677,0.0011393633],"genre_scores_gemma":[0.9989771,0.000029502178,0.0003612954,0.00025623981,0.00011249454,0.000019079815,0.000030164443,0.00002612442,0.00018800098],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99868804,0.00019597352,0.00034565473,0.00029487768,0.00016036723,0.00031511148],"domain_scores_gemma":[0.99931836,0.000091129965,0.00009203254,0.00037566415,0.00003332776,0.00008949233],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00019005171,0.00014807677,0.0004259823,0.00021270801,0.000040260897,0.0000038761063,0.000108425775,0.000047520876,0.00014378579],"category_scores_gemma":[0.00025245713,0.00012708547,0.00017981532,0.000105459585,0.00012215335,0.00003101626,0.0000880579,0.00018957363,0.000017836537],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00027297248,0.0011683956,0.19412562,0.00029779784,0.000025873902,0.011937396,0.0003524938,0.00003934326,0.7845088,0.0017612547,0.0022285255,0.0032814792],"study_design_scores_gemma":[0.0049166647,0.0010355576,0.9778739,0.00023486691,0.00008357972,0.0021496897,0.000054376018,0.00019275112,0.011300901,0.0007786905,0.0011980631,0.00018094819],"about_ca_topic_score_codex":0.000031430238,"about_ca_topic_score_gemma":0.00001942319,"teacher_disagreement_score":0.78374827,"about_ca_system_score_codex":0.000013469314,"about_ca_system_score_gemma":0.000014882546,"threshold_uncertainty_score":0.5182395},"labels":[],"label_agreement":null},{"id":"W2134496677","doi":"10.1053/s0046-8177(03)00411-8","title":"Tissue microarray analysis of neuroendocrine differentiation and its prognostic significance in breast cancer","year":2003,"lang":"en","type":"article","venue":"Human Pathology","topic":"HER2/EGFR in Cancer Research","field":"Medicine","cited_by":118,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Vancouver General Hospital; University of British Columbia; BC Cancer Agency","funders":"","keywords":"Tissue microarray; Synaptophysin; Neuroendocrine differentiation; Breast cancer; Pathology; Enolase; Progesterone receptor; Immunohistochemistry; Biology; Immunostaining; Chromogranin A; Breast carcinoma; Estrogen receptor; Univariate analysis; Carcinoma; Cancer; Oncology; Internal medicine; Medicine; Multivariate analysis","score_opus":0.036436739262175305,"score_gpt":0.36019780607332796,"score_spread":0.3237610668111527,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2134496677","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99768406,0.00092648994,0.000040304447,0.00052764337,0.000050469258,0.00039595415,0.00004316142,0.000013717537,0.0003181957],"genre_scores_gemma":[0.9990357,0.00026302514,0.000047483936,0.000113377624,0.000025523936,0.000098912125,0.000023398285,0.00001634929,0.00037621535],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9987218,0.00021626476,0.00028905857,0.0003350834,0.00016042557,0.0002774138],"domain_scores_gemma":[0.9994604,0.000062957166,0.00008388439,0.00020792974,0.00010644839,0.00007836718],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015493107,0.000111379944,0.00042447748,0.000477818,0.0000316684,0.0000058359587,0.00006209855,0.000041908635,0.0007740264],"category_scores_gemma":[0.000104402825,0.00010434934,0.000038758248,0.000625554,0.00010286664,0.000027338383,0.0000241795,0.00019267909,0.0000045222214],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000341068,0.00012836591,0.60586625,0.00014109185,0.00006814779,0.0002517961,0.00019911304,0.000016509048,0.39189968,0.00034159023,0.00006053507,0.0009928142],"study_design_scores_gemma":[0.000763432,0.00015365612,0.96195084,0.000043573204,0.00030187925,0.00013885577,0.000028102153,0.00008092042,0.036156915,0.000042979445,0.0002591851,0.00007965304],"about_ca_topic_score_codex":0.00012546265,"about_ca_topic_score_gemma":0.00041604167,"teacher_disagreement_score":0.35608461,"about_ca_system_score_codex":0.00006421777,"about_ca_system_score_gemma":0.000067882946,"threshold_uncertainty_score":0.8475046},"labels":[],"label_agreement":null},{"id":"W2134913779","doi":"10.1016/j.humpath.2013.07.013","title":"Peritoneal elastic lamina invasion: limitations in its use as a prognostic marker in stage II colorectal cancer","year":2013,"lang":"en","type":"article","venue":"Human Pathology","topic":"Intraperitoneal and Appendiceal Malignancies","field":"Medicine","cited_by":30,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University Health Network; Mount Sinai Hospital; St. Michael's Hospital; University of Toronto","funders":"","keywords":"Colorectal cancer; Medicine; Stage (stratigraphy); Lamina; Stain; Cancer; Immunohistochemistry; Pathology; Adjuvant therapy; Internal medicine; Oncology; Staining; Biology; Anatomy","score_opus":0.06127163247715576,"score_gpt":0.29405746632689206,"score_spread":0.2327858338497363,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2134913779","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9947787,0.00018748226,9.0243793e-7,0.0010058872,0.00017075709,0.00097295875,0.000016865984,0.000047864756,0.0028185917],"genre_scores_gemma":[0.9929879,0.00006586387,0.00012101374,0.0006058239,0.00009785582,0.00076482835,0.000044040644,0.000027117114,0.0052856044],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9984906,0.00012693617,0.00038113873,0.00036361333,0.00015749557,0.00048025075],"domain_scores_gemma":[0.99936765,0.00019762112,0.00007382478,0.0001392515,0.000111042216,0.000110588124],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00013180448,0.00019628541,0.0003698643,0.00025429987,0.00013745645,0.000028330374,0.00009099681,0.00017999158,0.001508497],"category_scores_gemma":[0.00038506766,0.00017500288,0.0000516634,0.00025839292,0.00019522628,0.0002077371,0.000096347125,0.00037094016,0.00024780186],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00029898985,0.0011963882,0.67128354,0.00030900794,0.00002928953,0.0060543683,0.007659045,0.00003070345,0.3024304,0.008412585,0.0007734558,0.0015222138],"study_design_scores_gemma":[0.001261932,0.0010528803,0.99348176,0.0002247556,0.000023651839,0.0003294861,0.0005903397,0.0001841529,0.0012984428,0.0002304,0.0011316413,0.0001905433],"about_ca_topic_score_codex":0.0008193545,"about_ca_topic_score_gemma":0.0037704802,"teacher_disagreement_score":0.3221982,"about_ca_system_score_codex":0.00010294897,"about_ca_system_score_gemma":0.00013374674,"threshold_uncertainty_score":0.99940425},"labels":[],"label_agreement":null},{"id":"W2139360645","doi":"10.1016/j.humpath.2006.11.009","title":"Recommendations for the reporting of surgically resected specimens of colorectal carcinoma","year":2007,"lang":"en","type":"article","venue":"Human Pathology","topic":"Colorectal Cancer Surgical Treatments","field":"Medicine","cited_by":75,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"","keywords":"Medicine; Colorectal cancer; Total mesorectal excision; Checklist; Modalities; Lymph node; Stage (stratigraphy); Radiation therapy; General surgery; Cancer; Radiology; Pathology; Internal medicine; Psychology","score_opus":0.11130407986021981,"score_gpt":0.39057703974501773,"score_spread":0.27927295988479794,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2139360645","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98894316,0.00013063685,0.00020135014,0.0004950884,0.00015946617,0.00065281644,0.000023341896,0.000023393164,0.00937075],"genre_scores_gemma":[0.9977356,0.000007167488,0.0015636657,0.000041002608,0.00007415506,0.00004558966,0.000053396157,0.000015354186,0.00046407484],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9981781,0.00005155402,0.0011820785,0.00021182047,0.00013795294,0.0002384869],"domain_scores_gemma":[0.9976306,0.0008082812,0.0009330038,0.00027320828,0.00029693064,0.000057976282],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0012015852,0.00010127972,0.00044981804,0.00010307976,0.00009534373,0.0000017976524,0.00007941278,0.000094489216,0.0003338136],"category_scores_gemma":[0.0008318619,0.00007036737,0.00018033209,0.00020645902,0.00022081583,0.00001604463,0.00005172023,0.00012719563,0.0000017107749],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0046263486,0.0010902329,0.6177376,0.00018731154,0.00036122056,0.0012185888,0.0022357556,0.0000036746176,0.3525269,0.0076006763,0.0018252857,0.010586421],"study_design_scores_gemma":[0.0021122436,0.0018184504,0.9453874,0.000031077954,0.00013722421,0.0003758324,0.00020853308,0.000015636224,0.04672955,0.00036383324,0.0027513786,0.00006879728],"about_ca_topic_score_codex":0.000049012237,"about_ca_topic_score_gemma":0.00017915425,"teacher_disagreement_score":0.32764986,"about_ca_system_score_codex":0.00007390682,"about_ca_system_score_gemma":0.000061312254,"threshold_uncertainty_score":0.36550248},"labels":[],"label_agreement":null},{"id":"W2142035174","doi":"10.1016/j.humpath.2014.11.007","title":"Profilin-1 expression is associated with high grade and stage and decreased disease-free survival in renal cell carcinoma","year":2014,"lang":"en","type":"article","venue":"Human Pathology","topic":"Renal and related cancers","field":"Biochemistry, Genetics and Molecular Biology","cited_by":31,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University Health Network; Princess Margaret Cancer Centre; St. Michael's Hospital; University of Toronto; London Health Sciences Centre","funders":"Canadian Institutes of Health Research","keywords":"Clear cell renal cell carcinoma; Hazard ratio; Immunohistochemistry; Internal medicine; Stage (stratigraphy); Oncology; Medicine; Univariate analysis; Tissue microarray; Renal cell carcinoma; Pathology; Multivariate analysis; Biology; Confidence interval","score_opus":0.008292931658344055,"score_gpt":0.21578820604831944,"score_spread":0.2074952743899754,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2142035174","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9988602,0.0004957605,0.00003366936,0.0000759502,0.000032749143,0.0001229131,0.000041148414,0.00000838674,0.0003292126],"genre_scores_gemma":[0.99872464,0.000051464183,0.00006601527,0.00013268976,0.000047516558,0.000017192437,0.00014191338,0.00001704062,0.0008015354],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99904424,0.00016911735,0.00012820109,0.000370505,0.00008064773,0.00020726799],"domain_scores_gemma":[0.99952793,0.000014570336,0.000076062184,0.0002361965,0.000024209627,0.00012105467],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013717136,0.00013905323,0.0001626762,0.00004145455,0.000077273144,0.000007659163,0.00009206743,0.00017057663,0.0000098771825],"category_scores_gemma":[0.00003526917,0.000106225525,0.000022023165,0.00003743701,0.0001731674,0.0000030663948,0.000094356416,0.00011973037,5.1298974e-7],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00022782835,0.00008329301,0.24270488,0.000039134582,0.00001209653,0.00011100894,0.000108091306,0.000011740834,0.75626683,0.0001200241,0.0002479004,0.00006719115],"study_design_scores_gemma":[0.0046761013,0.00085334724,0.77733713,0.00005261742,0.000039475093,0.000014523585,0.0000502457,0.00003850343,0.21569435,0.0005339568,0.00039668512,0.00031307735],"about_ca_topic_score_codex":0.000039463386,"about_ca_topic_score_gemma":0.00009863382,"teacher_disagreement_score":0.54057246,"about_ca_system_score_codex":0.00000958192,"about_ca_system_score_gemma":0.00003118827,"threshold_uncertainty_score":0.43317512},"labels":[],"label_agreement":null},{"id":"W2143465242","doi":"10.1016/j.humpath.2013.05.014","title":"Dysregulation of the mammalian target of rapamycin pathway in chromophobe renal cell carcinomas","year":2013,"lang":"en","type":"article","venue":"Human Pathology","topic":"Renal cell carcinoma treatment","field":"Medicine","cited_by":17,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal","funders":"National Cancer Institute","keywords":"PTEN; Chromophobe cell; PI3K/AKT/mTOR pathway; Protein kinase B; Medicine; Cancer research; Clear cell; Internal medicine; Kidney cancer; Kidney; Cancer; Oncology; Renal cell carcinoma; Pathology; Endocrinology; Biology; Apoptosis","score_opus":0.018133259746038112,"score_gpt":0.23218012039886868,"score_spread":0.21404686065283057,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2143465242","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9909968,0.00034803513,0.000008950501,0.00016058145,0.000078394754,0.00066288176,0.000007893381,0.0000104346445,0.007726051],"genre_scores_gemma":[0.99798554,0.0000029423434,0.00050588953,0.000057602545,0.000048474813,0.00004593084,0.000031836553,0.000021034944,0.001300741],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9986257,0.00019163123,0.0004929654,0.00025110407,0.00020267713,0.00023592032],"domain_scores_gemma":[0.99900347,0.000033333723,0.00025038474,0.00055139855,0.00010356231,0.00005784161],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00019027785,0.00015686448,0.000418119,0.00016587958,0.000033799864,0.0000026197401,0.00013069794,0.0001394153,0.0005888848],"category_scores_gemma":[0.000018447812,0.00010828956,0.00013785498,0.0001789059,0.00021481708,0.000047009402,0.000068187015,0.00015998025,0.000027056445],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000033475524,0.00021862952,0.22382104,0.000108075335,0.00000797678,0.000098129975,0.0008423097,0.000021514963,0.77424145,0.0002632183,0.00015579215,0.00018837216],"study_design_scores_gemma":[0.0010358335,0.00038207986,0.5938092,0.000029810266,0.000017665254,0.00005825722,0.00006558889,0.000014625339,0.40406284,0.0004181816,0.000054892247,0.000051044626],"about_ca_topic_score_codex":0.00022039808,"about_ca_topic_score_gemma":0.00006049344,"teacher_disagreement_score":0.37017864,"about_ca_system_score_codex":0.00008840405,"about_ca_system_score_gemma":0.00007266517,"threshold_uncertainty_score":0.64478755},"labels":[],"label_agreement":null},{"id":"W2150223306","doi":"10.1016/j.humpath.2006.05.013","title":"Atypical immature cervical metaplasia: immunoprofiling and longitudinal outcome☆","year":2006,"lang":"en","type":"article","venue":"Human Pathology","topic":"Cervical Cancer and HPV Research","field":"Medicine","cited_by":29,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta; University of Calgary","funders":"","keywords":"Medicine; Squamous intraepithelial lesion; Squamous metaplasia; Biomarker; Pathology; Metaplasia; Ki-67; Internal medicine; Immunohistochemistry; Gastroenterology; Cervical intraepithelial neoplasia; Cancer; Cervical cancer; Biology; Epithelium","score_opus":0.04458018897420815,"score_gpt":0.36187226059811006,"score_spread":0.31729207162390194,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2150223306","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97489834,0.00193204,0.00012009692,0.001396071,0.00009962437,0.00022121136,0.000006709756,0.00007448883,0.02125145],"genre_scores_gemma":[0.9971538,0.000018892408,0.0005196251,0.00024810864,0.00044992683,0.00002199348,0.00005498339,0.000022231598,0.0015104143],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.998595,0.00006526536,0.0003195517,0.00038356145,0.00023111686,0.00040552675],"domain_scores_gemma":[0.99939793,0.0000598229,0.00003664008,0.00027832706,0.000099663885,0.00012758578],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0002484238,0.00015723846,0.00043804996,0.00011381878,0.00016240403,0.000024259702,0.00008900362,0.0002398239,0.0024883004],"category_scores_gemma":[0.000047281712,0.0001251408,0.00010541621,0.00011897655,0.0002762418,0.000037506965,0.00013497188,0.000641741,0.00008220198],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0018595081,0.00040938074,0.9144762,0.0004172264,0.000074931675,0.0029564698,0.00011770249,0.0000014622839,0.025883855,0.044867184,0.0016381277,0.0072979657],"study_design_scores_gemma":[0.0015926708,0.00031337276,0.99147886,0.0000060441625,0.00007619614,0.0009700975,0.000030468578,0.000024814564,0.0006104238,0.0022916899,0.002489411,0.00011595915],"about_ca_topic_score_codex":0.000049577324,"about_ca_topic_score_gemma":0.00009448387,"teacher_disagreement_score":0.07700267,"about_ca_system_score_codex":0.00004968751,"about_ca_system_score_gemma":0.000029279563,"threshold_uncertainty_score":0.9984236},"labels":[],"label_agreement":null},{"id":"W2150629441","doi":"10.1016/j.humpath.2013.01.017","title":"A unique case of sclerosing polycystic adenosis of the sinonasal tract","year":2013,"lang":"en","type":"article","venue":"Human Pathology","topic":"Salivary Gland Tumors Diagnosis and Treatment","field":"Medicine","cited_by":16,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ottawa Hospital","funders":"","keywords":"Pathology; Medicine; Dysplasia; Apocrine; Metaplasia; Myoepithelial cell; Atypia; Columnar Cell; Epithelium; Immunohistochemistry","score_opus":0.030283277930722996,"score_gpt":0.2867215354396558,"score_spread":0.2564382575089328,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2150629441","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99796396,0.00022499479,0.00000832593,0.00028030292,0.00007021339,0.00033768656,0.00000735976,0.000013235386,0.0010939036],"genre_scores_gemma":[0.99946433,0.000010215201,0.00017593485,0.00017270174,0.000036668083,0.000038997587,0.0000055375504,0.000013219594,0.00008238358],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9992799,0.00009053288,0.00026588098,0.00014196675,0.00007631023,0.00014541522],"domain_scores_gemma":[0.99934626,0.000097451644,0.00013507488,0.0003098025,0.000061439394,0.000049968858],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000076891854,0.00009966331,0.00029041953,0.00006471758,0.000061886705,0.0000033575673,0.000057349134,0.00006753209,0.00035825188],"category_scores_gemma":[0.00003881732,0.0000612262,0.00011342218,0.00008669397,0.00017688946,0.000025834737,0.000034346114,0.000097114054,0.000014131714],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000041224182,0.0016734861,0.9472858,0.00012138633,0.0000795759,0.0030658126,0.001242044,0.0000020022874,0.04152152,0.002860341,0.00036448948,0.0017423196],"study_design_scores_gemma":[0.0010073471,0.0005313437,0.96842915,0.00011507104,0.00015418296,0.0061804457,0.00013048862,0.000006643222,0.022891616,0.00049299386,0.000008257297,0.00005248519],"about_ca_topic_score_codex":0.0005146988,"about_ca_topic_score_gemma":0.00002687429,"teacher_disagreement_score":0.021143323,"about_ca_system_score_codex":0.000021691063,"about_ca_system_score_gemma":0.000031315616,"threshold_uncertainty_score":0.3922607},"labels":[],"label_agreement":null},{"id":"W2152111808","doi":"10.1053/hupa.2002.124033","title":"Prostate carcinoma expression of estrogen receptor-β as detected by PPG5/10 antibody has positive association with primary Gleason grade and Gleason score","year":2002,"lang":"en","type":"article","venue":"Human Pathology","topic":"Prostate Cancer Treatment and Research","field":"Medicine","cited_by":39,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Royal University Hospital","funders":"","keywords":"Prostate; Prostate cancer; Medicine; Estrogen receptor; LNCaP; PCA3; Carcinoma; Immunohistochemistry; Adenocarcinoma; Estrogen; Pathology; Oncology; Internal medicine; Urology; Cancer research; Cancer; Breast cancer","score_opus":0.024644412928918988,"score_gpt":0.2830361450499062,"score_spread":0.2583917321209872,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2152111808","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9931917,0.0044094427,0.0000081027565,0.00053573464,0.000030519735,0.00083792966,0.00008378907,0.000049665894,0.00085309724],"genre_scores_gemma":[0.99525315,0.0003814504,0.00030533693,0.000057404242,0.00005962237,0.00005456093,0.0007244657,0.000034740715,0.003129281],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99847615,0.00017855629,0.00021970666,0.00040144767,0.00034824474,0.00037588493],"domain_scores_gemma":[0.99917936,0.0000587312,0.00021272223,0.00021173901,0.00020055297,0.00013692077],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001395666,0.00019558512,0.00039806074,0.00011912826,0.00018477984,0.000021415493,0.00006396833,0.00019422217,0.00025084856],"category_scores_gemma":[0.000050010243,0.00015202047,0.000046778212,0.00015188253,0.00024851,0.00009770605,0.000053468608,0.00025450208,0.000021938395],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005956868,0.0002866028,0.32812455,0.0000998259,0.000047612597,0.00014002476,0.0010792343,1.08490354e-7,0.66672945,0.000010460227,0.0020888709,0.0007975378],"study_design_scores_gemma":[0.006048187,0.0053257262,0.420631,0.00035922465,0.00015982233,0.00013252124,0.00014642942,0.000013624991,0.56646276,0.000051720803,0.00046125462,0.00020774532],"about_ca_topic_score_codex":0.000059786755,"about_ca_topic_score_gemma":0.0000036154968,"teacher_disagreement_score":0.10026672,"about_ca_system_score_codex":0.00024552134,"about_ca_system_score_gemma":0.000059748898,"threshold_uncertainty_score":0.61992145},"labels":[],"label_agreement":null},{"id":"W2152286217","doi":"10.1016/j.humpath.2009.01.011","title":"Validation of immature adipogenic status and identification of prognostic biomarkers in myxoid liposarcoma using tissue microarrays","year":2009,"lang":"en","type":"article","venue":"Human Pathology","topic":"Sarcoma Diagnosis and Treatment","field":"Medicine","cited_by":44,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia; Vancouver Coastal Health Research Institute","funders":"","keywords":"Myxoid liposarcoma; Liposarcoma; Tissue microarray; Pathology; Adipose tissue; Immunohistochemistry; Adipogenesis; Gene expression profiling; Biology; Medicine; Proportional hazards model; Sarcoma; Cancer research; Oncology; Internal medicine; Gene expression; Gene; Genetics","score_opus":0.022433209301105886,"score_gpt":0.3109547283706803,"score_spread":0.2885215190695744,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2152286217","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99568355,0.0036794427,0.000027219226,0.00009125733,0.000032875614,0.0004218886,0.000011506147,0.000009798632,0.000042488027],"genre_scores_gemma":[0.9990086,0.00008585545,0.0007579687,0.000022313478,0.000014673588,0.000009802331,0.00008608003,0.000008395353,0.00000630837],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99910593,0.00007463992,0.00038511102,0.00020025537,0.00008385486,0.00015017991],"domain_scores_gemma":[0.999474,0.000038291204,0.00019833412,0.00018889003,0.00006133543,0.00003913826],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015458642,0.000095702046,0.00026709115,0.00023759555,0.000025916248,0.000004461179,0.000032405824,0.00009610311,0.000016389784],"category_scores_gemma":[0.00005295368,0.00008916022,0.000034927627,0.00014732586,0.00008561584,0.000038622155,0.000012163686,0.00005915914,0.0000014344903],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007681187,0.00040919104,0.2649573,0.000058361977,0.00003111329,0.00006396233,0.00048558027,0.000002591386,0.730078,0.00017926976,0.000006333513,0.003651499],"study_design_scores_gemma":[0.0008894338,0.00032359635,0.6986426,0.000069394664,0.00012548166,0.00010700123,0.000060818675,0.0000147724295,0.29943386,0.00027989608,0.000007507585,0.000045646168],"about_ca_topic_score_codex":0.00003285887,"about_ca_topic_score_gemma":0.000009373202,"teacher_disagreement_score":0.4336853,"about_ca_system_score_codex":0.000032390162,"about_ca_system_score_gemma":0.00002713735,"threshold_uncertainty_score":0.36358482},"labels":[],"label_agreement":null},{"id":"W2153077084","doi":"10.1016/j.humpath.2011.10.002","title":"Microsatellite instability status does not predict total lymph node or negative lymph node retrieval in stage III colon cancer","year":2012,"lang":"en","type":"article","venue":"Human Pathology","topic":"Genetic factors in colorectal cancer","field":"Medicine","cited_by":18,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University; Queen Elizabeth II Health Sciences Centre","funders":"Killam Trusts","keywords":"Microsatellite instability; Colorectal cancer; Lymph node; Lymph; Medicine; Cancer; Stage (stratigraphy); Oncology; Cohort; Microsatellite; Internal medicine; Pathology; Biology; Genetics; Gene","score_opus":0.03313283581372268,"score_gpt":0.32012565488590417,"score_spread":0.2869928190721815,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2153077084","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99423635,0.0007595944,0.000020897556,0.0001944645,0.0016762589,0.00095517276,0.00058887765,0.00011182911,0.0014565339],"genre_scores_gemma":[0.99440515,0.00022840286,0.0007966707,0.0010589998,0.00045847055,0.00015940155,0.00007435759,0.00007118582,0.0027473727],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.996409,0.00036845473,0.00076063996,0.0007601629,0.00041923035,0.0012825265],"domain_scores_gemma":[0.99819905,0.00029539337,0.0002594403,0.00068750774,0.00018714234,0.00037144643],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0006730197,0.00043566604,0.00086283765,0.0002226997,0.00015290851,0.000021322008,0.00019287155,0.0004697741,0.0024071524],"category_scores_gemma":[0.0005023073,0.00032603004,0.00012755417,0.00035419164,0.0007646437,0.00015453609,0.0002465278,0.00046583242,0.000039845083],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.005039359,0.00044111963,0.73684585,0.00022644496,0.000050722214,0.0001922833,0.006503664,0.000028851424,0.24976215,0.000041754218,0.000064614505,0.00080316473],"study_design_scores_gemma":[0.0062998827,0.00036633006,0.888861,0.00009614865,0.00008904262,0.00010102381,0.00058170705,0.000037456528,0.10215101,0.000051654795,0.0010028126,0.00036195648],"about_ca_topic_score_codex":0.0012454992,"about_ca_topic_score_gemma":0.0007597224,"teacher_disagreement_score":0.1520151,"about_ca_system_score_codex":0.0016189402,"about_ca_system_score_gemma":0.00062301353,"threshold_uncertainty_score":0.9999192},"labels":[],"label_agreement":null},{"id":"W2155633869","doi":"10.1016/j.humpath.2012.04.008","title":"Prognostic value of immunophenotyping and gene mutations in elderly patients with acute myeloid leukemia with normal karyotype","year":2012,"lang":"en","type":"article","venue":"Human Pathology","topic":"Acute Myeloid Leukemia Research","field":"Medicine","cited_by":17,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University Health Network; University of Toronto","funders":"","keywords":"NPM1; Myeloid leukemia; Immunophenotyping; Internal medicine; Karyotype; Univariate analysis; Medicine; Oncology; Myeloid; Population; Gastroenterology; Immunology; Multivariate analysis; Biology; Antigen; Chromosome; Gene; Genetics","score_opus":0.01222391645298323,"score_gpt":0.267094824951969,"score_spread":0.2548709084989858,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2155633869","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.997991,0.00024745494,0.00021450149,0.000049463895,0.00002964272,0.0006872805,0.000013406804,0.00002822971,0.00073897804],"genre_scores_gemma":[0.9944543,0.000016240198,0.0050020227,0.00008322522,0.000050956933,0.00006732402,0.0001622548,0.000040748542,0.0001229145],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9985944,0.00010955811,0.0002925374,0.00025593335,0.00023549677,0.000512076],"domain_scores_gemma":[0.9991945,0.000088548106,0.00012127826,0.0002936017,0.00016823984,0.0001338547],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00023901898,0.00018156812,0.00037179844,0.00028643018,0.00010033335,0.000007696701,0.0000966053,0.00012469117,0.000041064213],"category_scores_gemma":[0.00005689622,0.00013783117,0.000022573773,0.00027456292,0.00037909887,0.00017850888,0.000080879334,0.0003922589,0.00001302035],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00073338376,0.00022717565,0.9793967,0.00009313387,0.00011494825,0.00025194965,0.002314189,0.000019447807,0.0146075105,0.0006583408,0.00001687623,0.0015663696],"study_design_scores_gemma":[0.0045888447,0.0023072078,0.9904802,0.00009060808,0.00017397881,0.00042311838,0.00013596451,0.00004098729,0.0015294629,0.000054695218,0.000022427963,0.00015254789],"about_ca_topic_score_codex":0.00008911337,"about_ca_topic_score_gemma":0.000039628183,"teacher_disagreement_score":0.013078048,"about_ca_system_score_codex":0.00020775509,"about_ca_system_score_gemma":0.0002736951,"threshold_uncertainty_score":0.5620592},"labels":[],"label_agreement":null},{"id":"W2163569376","doi":"10.1053/hupa.2001.24323","title":"Mixed epithelial and stromal tumor of the kidney lacks the genetic alterations of cellular congenital mesoblastic nephroma","year":2001,"lang":"en","type":"article","venue":"Human Pathology","topic":"Renal and related cancers","field":"Biochemistry, Genetics and Molecular Biology","cited_by":67,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University; BC Children's Hospital; Vancouver General Hospital; Credit Valley Hospital; University of British Columbia","funders":"","keywords":"Stromal cell; Pathology; Biology; Stromal tumor; Kidney; In situ hybridization; Fluorescence in situ hybridization; Wilms' tumor; Cancer research; Gene; Chromosome; Medicine; Genetics; Gene expression","score_opus":0.008400635814377076,"score_gpt":0.21214397521226844,"score_spread":0.20374333939789135,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2163569376","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99828464,0.00056689273,0.00021550087,0.00012765743,0.00015364001,0.00013333593,0.000042045678,0.0000027577933,0.00047354357],"genre_scores_gemma":[0.99923444,0.000062844774,0.00006177028,0.00016709477,0.000114815404,0.000010040602,0.00001812319,0.0000097276725,0.000321118],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99930453,0.000120134995,0.00020348417,0.00016544209,0.000068045585,0.0001383388],"domain_scores_gemma":[0.9995387,0.000011420639,0.0001111181,0.00024979407,0.00004689631,0.000042052405],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00006555857,0.00009620955,0.00012329222,0.000019016537,0.00011225329,0.0000052992837,0.00016469648,0.00008875339,0.000030835723],"category_scores_gemma":[0.00003324858,0.0000566672,0.00007641614,0.000049741073,0.00050296786,0.0000014880086,0.000089116584,0.00008981867,0.0000015505335],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00003062245,0.000026148531,0.0025213175,0.000009251289,0.00004644127,0.00001539925,0.000101890924,0.000056144294,0.9964395,0.0003275724,0.0002898185,0.00013590475],"study_design_scores_gemma":[0.0013667373,0.0009825198,0.08762898,0.000026682452,0.00018431667,0.00049964123,0.00016025749,0.00013384811,0.9031277,0.00060726237,0.0050809747,0.00020111656],"about_ca_topic_score_codex":0.000014143495,"about_ca_topic_score_gemma":0.000033242155,"teacher_disagreement_score":0.09331183,"about_ca_system_score_codex":0.0000035844503,"about_ca_system_score_gemma":0.000053842865,"threshold_uncertainty_score":0.23108213},"labels":[],"label_agreement":null},{"id":"W2163933632","doi":"10.1016/j.humpath.2015.02.001","title":"Accuracy of classifying poorly differentiated non–small cell lung carcinoma biopsies with commonly used lung carcinoma markers","year":2015,"lang":"en","type":"article","venue":"Human Pathology","topic":"Lung Cancer Treatments and Mutations","field":"Medicine","cited_by":24,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia Hospital; Vancouver General Hospital; University of British Columbia","funders":"","keywords":"Adenocarcinoma; Adenosquamous carcinoma; Immunohistochemistry; Pathology; Biopsy; Carcinoma; Medicine; Tissue microarray; Lung; Lung cancer; Cancer; Internal medicine","score_opus":0.03822147948428445,"score_gpt":0.30970320364329845,"score_spread":0.271481724159014,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2163933632","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9905293,0.0008721331,0.00018251233,0.00021962967,0.00016594818,0.0007675543,0.000045009136,0.00007307161,0.007144835],"genre_scores_gemma":[0.99756616,0.0000075498315,0.00061492884,0.00015770177,0.00006960855,0.00007661336,0.00029736478,0.000057051726,0.001153042],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99844474,0.00012057005,0.00040251328,0.00040483996,0.00021496192,0.000412367],"domain_scores_gemma":[0.9986149,0.000085333995,0.00030025246,0.0005220535,0.00024645496,0.0002310179],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012511662,0.00029310375,0.0005903908,0.00025271229,0.00014394952,0.000022383758,0.00015046421,0.00015366102,0.00007999654],"category_scores_gemma":[0.000027194315,0.00022655158,0.00010545813,0.0002012862,0.00022362258,0.00009063674,0.00007508156,0.00023017911,0.000009455149],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003167258,0.00035084676,0.9751293,0.00030375467,0.00016571124,0.00065362075,0.005457202,0.0000063766934,0.015907295,0.00008964196,0.0013721607,0.00024733157],"study_design_scores_gemma":[0.00931797,0.0012777532,0.98015255,0.00012752888,0.0012025208,0.00023969752,0.0022760464,0.0004911922,0.0044842996,0.000024521261,0.0001452209,0.00026070664],"about_ca_topic_score_codex":0.00049279764,"about_ca_topic_score_gemma":0.00027222425,"teacher_disagreement_score":0.0114229955,"about_ca_system_score_codex":0.00022734024,"about_ca_system_score_gemma":0.00035658263,"threshold_uncertainty_score":0.92385054},"labels":[],"label_agreement":null},{"id":"W2164407356","doi":"10.1016/j.humpath.2015.06.001","title":"Diagnostic value of fine needle aspiration BRAFV600E mutation analysis in papillary thyroid cancer: a systematic review and meta-analysis","year":2015,"lang":"en","type":"review","venue":"Human Pathology","topic":"Thyroid Cancer Diagnosis and Treatment","field":"Medicine","cited_by":65,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Public Health Ontario; University of Toronto; McMaster University; St. Michael's Hospital","funders":"King Saud University; American Academy of Otolaryngology-Head and Neck Surgery","keywords":"Meta-analysis; Medicine; Fine-needle aspiration; Thyroid cancer; Mutation testing; Papillary thyroid cancer; Cancer; Thyroid; Pathology; Radiology; Oncology; Mutation; Internal medicine; Biopsy; Biology; Genetics","score_opus":0.09798042548696559,"score_gpt":0.3951622578727131,"score_spread":0.29718183238574747,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2164407356","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00021973894,0.99567324,0.000026644424,0.00014446737,0.000021666454,0.0035718519,0.00025945817,0.000021811644,0.00006113844],"genre_scores_gemma":[0.002428571,0.99188685,0.00007815233,0.00026109893,0.00002960153,0.0038099524,0.0013089866,0.000039984247,0.00015680045],"study_design_codex":"systematic_review","study_design_gemma":"meta_analysis","domain_scores_codex":[0.9955568,0.0011287858,0.001986916,0.0007147418,0.00035539968,0.00025735705],"domain_scores_gemma":[0.99665034,0.0005294571,0.0015760969,0.0008803072,0.000230849,0.00013296815],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0011293837,0.00054976146,0.01413443,0.0014020104,0.000044034376,0.000015220349,0.0001409608,0.0002884216,0.0002646341],"category_scores_gemma":[0.00036964027,0.00036929207,0.0024463134,0.002441244,0.00009064495,0.000057075125,0.00006509342,0.00024459112,0.0000112568705],"study_design_candidate":"meta_analysis","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000035072133,0.0003295196,0.00037640776,0.75371253,0.24119796,0.00050780113,0.00021007592,0.00007155284,4.020081e-7,0.00020231452,0.00017016333,0.0032177381],"study_design_scores_gemma":[0.00038885736,0.00042794173,0.00055725564,0.015604522,0.98190725,0.00008646858,0.0000131757315,0.000011120903,5.1228494e-7,0.000038520644,0.0007174874,0.00024688762],"about_ca_topic_score_codex":0.0003727521,"about_ca_topic_score_gemma":0.001258532,"teacher_disagreement_score":0.7407093,"about_ca_system_score_codex":0.0003144395,"about_ca_system_score_gemma":0.0002040514,"threshold_uncertainty_score":0.9998759},"labels":[],"label_agreement":null},{"id":"W2165318756","doi":"10.1016/j.humpath.2008.06.023","title":"Expression of thymosin β10 and its role in non–small cell lung cancer","year":2008,"lang":"en","type":"article","venue":"Human Pathology","topic":"Cellular Mechanics and Interactions","field":"Biochemistry, Genetics and Molecular Biology","cited_by":29,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Centre hospitalier universitaire de Québec; Hôtel-Dieu de Québec; Université Laval","funders":"Centre Hospitalier Universitaire de Québec","keywords":"Thymosin; Lymphatic vessel; Vascular endothelial growth factor; Lymphatic system; Vascular endothelial growth factor C; Lung cancer; Pathology; Microvessel; Endothelial stem cell; Endothelium; Lymphatic Endothelium; Lymph node; Growth factor; Medicine; Cancer; Vascular endothelial growth factor A; Biology; Cancer research; Immunohistochemistry; Internal medicine; Metastasis; Receptor","score_opus":0.011676309341361156,"score_gpt":0.2545568576630882,"score_spread":0.24288054832172706,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2165318756","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99525493,0.0030815427,0.0001444114,0.000014314044,0.00007417391,0.00010119501,0.000009532738,0.0000027323797,0.0013171748],"genre_scores_gemma":[0.9980843,0.0007300787,0.0000924261,0.00006681401,0.000053427004,0.00002487051,0.000028438619,0.000011366962,0.00090825435],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9994513,0.00003560557,0.00014808754,0.0002069164,0.00003124339,0.0001268918],"domain_scores_gemma":[0.99973154,0.000003897505,0.000060684586,0.00014093246,0.000033029155,0.00002991328],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00005534033,0.000079246325,0.0001140046,0.000046614023,0.00005328959,0.0000021048702,0.00007065465,0.000119706536,0.000059321967],"category_scores_gemma":[0.0000074401387,0.00007849168,0.000032650947,0.000028981867,0.000025158217,0.0000022986958,0.00008676886,0.000082241706,0.0000015672391],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000012636307,0.00005927767,0.0042094425,0.000015426665,0.0000023423315,0.000016966364,0.00023548244,0.000010110172,0.9950724,0.00005402435,0.00025239427,0.000059449012],"study_design_scores_gemma":[0.0004013659,0.00012673251,0.0065781684,0.00001702305,0.0000062825075,0.00003883396,0.0000561,0.0001993818,0.99100363,0.000033503522,0.0014500279,0.00008897414],"about_ca_topic_score_codex":0.0000348324,"about_ca_topic_score_gemma":0.000091617905,"teacher_disagreement_score":0.0040688417,"about_ca_system_score_codex":0.00000606873,"about_ca_system_score_gemma":0.000020725145,"threshold_uncertainty_score":0.32007977},"labels":[],"label_agreement":null},{"id":"W2168726172","doi":"10.1016/j.humpath.2004.03.006","title":"Mucinous borderline ovarian tumors: Points of general agreement and persistent controversies regarding nomenclature, diagnostic criteria, and behavior","year":2004,"lang":"en","type":"article","venue":"Human Pathology","topic":"Intraperitoneal and Appendiceal Malignancies","field":"Medicine","cited_by":156,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Vancouver General Hospital","funders":"","keywords":"Mucinous cystadenoma; Mucinous carcinoma; Mucinous Tumor; Pseudomyxoma peritonei; Pathology; Medicine; Appendix; Ovary; Mucinous cystadenocarcinoma; Adenocarcinoma; Internal medicine; Cancer; Biology; Pancreas","score_opus":0.016058419168098022,"score_gpt":0.27308991467160765,"score_spread":0.2570314955035096,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2168726172","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9964711,0.0012265656,0.000025906673,0.0010408956,0.00011907108,0.00036795848,0.000029977376,0.000021779775,0.00069674617],"genre_scores_gemma":[0.99689907,0.00009929375,0.0016368701,0.00092634105,0.00017526383,0.00002921227,0.00003674533,0.000013792151,0.00018342369],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99897385,0.000036430007,0.00029166366,0.00029477858,0.00012385569,0.00027940352],"domain_scores_gemma":[0.99948025,0.000059637743,0.00009886472,0.00016024146,0.000090348105,0.00011064434],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013960262,0.00016970048,0.00043606356,0.00010314976,0.00013826037,0.000014900175,0.000046837762,0.00009672863,0.00008923959],"category_scores_gemma":[0.00012446019,0.00014740045,0.00007096341,0.000044829576,0.00033170872,0.00005200192,0.00007725563,0.00013730626,0.0000026814992],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00067315745,0.0019579174,0.06799012,0.0012800561,0.0003101941,0.011903073,0.01294389,0.000008667822,0.8396223,0.059629258,0.0007148715,0.002966489],"study_design_scores_gemma":[0.013815113,0.007180829,0.9486245,0.0007078517,0.0011609432,0.0074994755,0.0024588879,0.000020943453,0.014847244,0.00250181,0.00062284974,0.0005595785],"about_ca_topic_score_codex":0.00014865151,"about_ca_topic_score_gemma":0.00003328919,"teacher_disagreement_score":0.88063437,"about_ca_system_score_codex":0.00004038629,"about_ca_system_score_gemma":0.000026765309,"threshold_uncertainty_score":0.6010816},"labels":[],"label_agreement":null},{"id":"W2168764107","doi":"10.1016/j.humpath.2009.09.009","title":"On being a pathologist—a logic for life","year":2009,"lang":"en","type":"article","venue":"Human Pathology","topic":"History of Medical Practice","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"Pathology; Medicine","score_opus":0.07015377051428223,"score_gpt":0.3740221281453618,"score_spread":0.30386835763107956,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2168764107","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8068008,0.0004734008,0.009063727,0.025160775,0.0006589267,0.0011194634,0.0000070159062,0.0004480272,0.15626791],"genre_scores_gemma":[0.9487373,0.000007833276,0.0036324116,0.044425555,0.00035925902,0.00003345374,0.00002751064,0.000018345107,0.0027582836],"study_design_codex":"theoretical_or_conceptual","study_design_gemma":"not_applicable","domain_scores_codex":[0.99869066,0.0001221535,0.00027804245,0.0003831476,0.00018058659,0.0003454058],"domain_scores_gemma":[0.99891347,0.00030712478,0.00011250677,0.00037793894,0.000064646105,0.00022430469],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006378492,0.00015095378,0.00036925235,0.00012901027,0.00018740493,0.0000056844724,0.0001163006,0.00023423256,0.00042319935],"category_scores_gemma":[0.0039128996,0.00013088074,0.00011343819,0.000061139326,0.00021182852,0.00004001334,0.000015373786,0.00041625887,0.00033401448],"study_design_candidate":"theoretical_or_conceptual","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0021340488,0.0028676486,0.00085438695,0.00020893344,0.00006273493,0.011957606,0.0025009366,0.000009233386,0.105726466,0.592525,0.24170788,0.039445147],"study_design_scores_gemma":[0.021028878,0.045643568,0.11012445,0.00033108867,0.00080265704,0.0047675315,0.00054954103,0.00017216495,0.0011311377,0.38066864,0.43339387,0.0013864802],"about_ca_topic_score_codex":7.7715777e-7,"about_ca_topic_score_gemma":0.0000011073269,"teacher_disagreement_score":0.21185635,"about_ca_system_score_codex":0.00007965408,"about_ca_system_score_gemma":0.00006163622,"threshold_uncertainty_score":0.53371614},"labels":[],"label_agreement":null},{"id":"W2170416712","doi":"10.1016/j.humpath.2007.12.008","title":"N-myc amplification was rarely detected by fluorescence in situ hybridization in retinoblastoma","year":2008,"lang":"en","type":"article","venue":"Human Pathology","topic":"Ocular Oncology and Treatments","field":"Medicine","cited_by":9,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Queen's University","funders":"","keywords":"Retinoblastoma; Fluorescence in situ hybridization; Enucleation; Locus (genetics); Biology; In situ hybridization; Gene duplication; Molecular biology; Chromosome; Cancer research; Gene; Genetics; Gene expression","score_opus":0.021941070764110195,"score_gpt":0.2805840503704496,"score_spread":0.2586429796063394,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2170416712","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99808526,0.00015445393,0.00011060586,0.00018323501,0.00004934566,0.000325418,0.0000030205154,0.00005248791,0.0010361917],"genre_scores_gemma":[0.9987511,0.00006252534,0.00046676534,0.00012612769,0.000022919528,0.000050282604,0.00021133987,0.000014414959,0.00029453344],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9989573,0.00016202433,0.00026991245,0.00030838625,0.000084700936,0.00021767785],"domain_scores_gemma":[0.99957573,0.000034420933,0.00007787531,0.0002248585,0.000041318155,0.00004577818],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012063692,0.00011289266,0.0002330199,0.00019767907,0.00007499947,0.000002011754,0.000058019286,0.00018199073,0.000048246387],"category_scores_gemma":[0.00010931898,0.00011376196,0.0000278353,0.00021497202,0.00014647414,0.00005012499,0.00001971068,0.00020249176,0.00009772318],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00017559514,0.00053928525,0.5996606,0.000015745158,0.000008520608,0.002971942,0.0007438197,0.0000023480302,0.3942874,0.00014052023,0.00050439907,0.0009498104],"study_design_scores_gemma":[0.0026890994,0.00044160083,0.9631524,0.00003147373,0.000015491698,0.00066150975,0.000025364256,0.000020356525,0.032548252,0.00015407194,0.00017112849,0.00008921905],"about_ca_topic_score_codex":0.000023624398,"about_ca_topic_score_gemma":0.00014230706,"teacher_disagreement_score":0.36349183,"about_ca_system_score_codex":0.00012507144,"about_ca_system_score_gemma":0.00004500692,"threshold_uncertainty_score":0.4639078},"labels":[],"label_agreement":null},{"id":"W2180806123","doi":"10.1016/j.humpath.2015.09.012","title":"Digital reporting of whole-slide images is safe and suitable for assessing organ quality in preimplantation renal biopsies","year":2015,"lang":"en","type":"article","venue":"Human Pathology","topic":"Prenatal Screening and Diagnostics","field":"Medicine","cited_by":46,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University Hospital Foundation","funders":"Università degli Studi di Verona","keywords":"Medicine; Concordance; Digital pathology; Telepathology; Digital image analysis; Radiology; Pathology; Biopsy; Internal medicine; Computer science","score_opus":0.11663095810841714,"score_gpt":0.4037077145170954,"score_spread":0.28707675640867825,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2180806123","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9949487,0.00015122592,0.001558842,0.00017074027,0.00003130668,0.00014749283,0.00006255966,0.000024733139,0.0029044042],"genre_scores_gemma":[0.9956742,0.0000024390492,0.0037251264,0.00006679679,0.00004786532,0.000007828252,0.0001743942,0.000009666356,0.00029169396],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.998865,0.00004060648,0.0006455981,0.00018727714,0.000095401745,0.0001660931],"domain_scores_gemma":[0.9989427,0.00024468137,0.0004935106,0.00013107534,0.00012254473,0.00006554213],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00087965606,0.00007855153,0.0003105665,0.00008443143,0.00004134343,0.000029806804,0.00003089471,0.00008461944,0.0000037960745],"category_scores_gemma":[0.004872834,0.000071017625,0.000025935224,0.000061752915,0.000100323145,0.00017570416,0.000047900197,0.000091657064,0.0000013143926],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013020707,0.00009315484,0.90575427,0.00020422907,0.000012938834,0.00024308148,0.0017576253,0.0000068688437,0.08219826,0.00024975796,0.00097368105,0.008375924],"study_design_scores_gemma":[0.0022242803,0.0003965743,0.9615604,0.00023794494,0.00004597573,0.0006315899,0.0015671093,0.000050940616,0.030595873,0.0023003498,0.00025300393,0.0001359155],"about_ca_topic_score_codex":0.00006858522,"about_ca_topic_score_gemma":0.000027859944,"teacher_disagreement_score":0.055806175,"about_ca_system_score_codex":0.000021459204,"about_ca_system_score_gemma":0.00005725948,"threshold_uncertainty_score":0.58335894},"labels":[],"label_agreement":null},{"id":"W2192375741","doi":"10.1016/j.humpath.2015.11.012","title":"A new subtype of high-grade mandibular osteosarcoma with RASAL1/MDM2 amplification","year":2015,"lang":"en","type":"article","venue":"Human Pathology","topic":"Sarcoma Diagnosis and Treatment","field":"Medicine","cited_by":37,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hotel Dieu Hospital","funders":"","keywords":"Osteosarcoma; Pathology; Fibrous dysplasia; Biology; Sarcoma; Fibroma; Immunohistochemistry; Cancer research; Medicine","score_opus":0.0502927900942837,"score_gpt":0.29916501286188935,"score_spread":0.24887222276760565,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2192375741","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9963365,0.0008622462,0.00047292912,0.0009863231,0.00006480589,0.0003314694,0.000005060334,0.000050456165,0.0008901804],"genre_scores_gemma":[0.9947839,0.000017445049,0.0043487786,0.00017837931,0.000097502845,0.000036506666,0.00011659021,0.000023689916,0.0003972012],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9991051,0.000057717683,0.00021679551,0.00025526233,0.00017734639,0.00018779065],"domain_scores_gemma":[0.99914896,0.000031143725,0.00012267384,0.00043228874,0.00009429389,0.00017064184],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00011394486,0.00013452972,0.00034743885,0.00010859889,0.000033845063,0.000005830524,0.00007124276,0.00008984332,0.00011309555],"category_scores_gemma":[0.000022899065,0.00009949838,0.000045817516,0.00011205465,0.000085875545,0.000029227023,0.00002512981,0.0000853937,0.00008077809],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00044312648,0.0013767111,0.9352032,0.000060479524,0.00017318343,0.0018969235,0.0012892196,0.000005958584,0.010954473,0.03454183,0.007719986,0.0063349116],"study_design_scores_gemma":[0.007478278,0.0025852798,0.9676984,0.000060445906,0.0003039419,0.0008896257,0.00017501245,0.000002932664,0.013192028,0.0038960434,0.003565477,0.00015256355],"about_ca_topic_score_codex":0.00021772414,"about_ca_topic_score_gemma":0.00009132829,"teacher_disagreement_score":0.032495175,"about_ca_system_score_codex":0.000053880733,"about_ca_system_score_gemma":0.000095225136,"threshold_uncertainty_score":0.40574262},"labels":[],"label_agreement":null},{"id":"W2291789139","doi":"10.1016/j.humpath.2016.02.002","title":"A morphological and immunophenotypic map of the immune response in Merkel cell carcinoma","year":2016,"lang":"en","type":"article","venue":"Human Pathology","topic":"Polyomavirus and related diseases","field":"Medicine","cited_by":39,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Nova Scotia Health Authority; Dalhousie University","funders":"","keywords":"Merkel cell carcinoma; FOXP3; Merkel cell polyomavirus; CD8; Immune system; CD20; Tumor-infiltrating lymphocytes; Immunology; Biology; T cell; Pathology; Medicine; Immunohistochemistry; Carcinoma","score_opus":0.015005695717551986,"score_gpt":0.2513917922238611,"score_spread":0.23638609650630912,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2291789139","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9927111,0.005563042,0.0000024882238,0.0009070944,0.00007609784,0.00015966478,0.000010945906,0.000011833322,0.0005577293],"genre_scores_gemma":[0.9976759,0.000026967926,0.000023336532,0.0001104275,0.000015447104,0.000010729011,0.0000011967721,0.000009665062,0.0021263119],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.999074,0.0002564416,0.0002389067,0.000176647,0.00006951075,0.000184494],"domain_scores_gemma":[0.9994239,0.000102976395,0.00007501606,0.0003317999,0.000019594583,0.00004668545],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00023330584,0.00009404871,0.00023898172,0.00007847877,0.000049159364,0.0000014267102,0.00009224164,0.00014400114,0.0002068927],"category_scores_gemma":[0.00007234844,0.00004477183,0.00006925289,0.0000549439,0.0004387871,0.000015337197,0.000106405445,0.00013031719,0.0000256964],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0015187472,0.00018571617,0.06803508,0.000021634183,0.0000058531136,0.00060379563,0.00021311067,1.1177177e-7,0.9286492,0.00037580845,0.000072778275,0.00031819282],"study_design_scores_gemma":[0.002581566,0.00047582312,0.97278047,0.00005080714,0.00004062314,0.00022987947,0.00005029336,8.7069975e-7,0.022929784,0.0005898328,0.00020927469,0.00006076687],"about_ca_topic_score_codex":0.00002566307,"about_ca_topic_score_gemma":0.0000019426122,"teacher_disagreement_score":0.9057194,"about_ca_system_score_codex":0.00002212356,"about_ca_system_score_gemma":0.00004202,"threshold_uncertainty_score":0.226533},"labels":[],"label_agreement":null},{"id":"W2293384795","doi":"10.1016/j.humpath.2016.02.011","title":"Neoadjuvant chemotherapy–related histologic changes in radical cystectomy: assessment accuracy and prediction of response","year":2016,"lang":"en","type":"article","venue":"Human Pathology","topic":"Bladder and Urothelial Cancer Treatments","field":"Medicine","cited_by":14,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"","keywords":"Cystectomy; Hyaline; Medicine; Stage (stratigraphy); Hydronephrosis; Fibrosis; Chemotherapy; Calcification; Urology; Pathology; Radiology; Surgery; Internal medicine; Bladder cancer; Urinary system; Cancer","score_opus":0.0266264516785639,"score_gpt":0.31932889913006,"score_spread":0.2927024474514961,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2293384795","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99525553,0.0005413991,0.000047567977,0.0030688152,0.00009204012,0.0003622267,0.000023243929,0.00004237305,0.0005667904],"genre_scores_gemma":[0.9986959,0.0002522335,0.00015874284,0.00024388517,0.00003067627,0.00005418929,0.000009359359,0.000014217017,0.0005407928],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9990283,0.00020963831,0.00023855142,0.0002524635,0.000097173746,0.00017384709],"domain_scores_gemma":[0.9994967,0.00012427696,0.00009550518,0.00019897016,0.000027361677,0.000057192745],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000303697,0.00011511967,0.00033023418,0.0001680081,0.000031783366,0.000001816306,0.00004300547,0.00015515696,0.00030866478],"category_scores_gemma":[0.0000682306,0.00007376778,0.000032306452,0.00007205046,0.0002302029,0.000030045787,0.000023189137,0.000104559396,0.000004283644],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0024717983,0.00043853512,0.25249514,0.0000531414,0.00006619401,0.0006795601,0.0011994587,1.060046e-7,0.70791966,0.00041647343,0.00022372167,0.034036234],"study_design_scores_gemma":[0.009963749,0.0026292703,0.97851604,0.00012606624,0.00005012337,0.00047042995,0.000043673506,0.0000056968347,0.0058525368,0.00065598835,0.0016173976,0.00006903612],"about_ca_topic_score_codex":0.000023387736,"about_ca_topic_score_gemma":0.000027980283,"teacher_disagreement_score":0.7260209,"about_ca_system_score_codex":0.00014434502,"about_ca_system_score_gemma":0.000063112944,"threshold_uncertainty_score":0.33796626},"labels":[],"label_agreement":null},{"id":"W2301343927","doi":"10.1016/j.humpath.2016.02.010","title":"A favorable role of prolactin in human breast cancer reveals novel pathway-based gene signatures indicative of tumor differentiation and favorable patient outcome","year":2016,"lang":"en","type":"review","venue":"Human Pathology","topic":"Growth Hormone and Insulin-like Growth Factors","field":"Medicine","cited_by":45,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University Health Centre","funders":"Canadian Institutes of Health Research","keywords":"Breast cancer; Prolactin; Mammary gland; Carcinogenesis; Cancer research; Gene expression profiling; Downregulation and upregulation; Biology; Metastasis; Gene expression; Gene signature; Cancer; Internal medicine; Microarray analysis techniques; Tissue microarray; Endocrinology; Hormone; Gene; Medicine; Genetics","score_opus":0.0328244000719109,"score_gpt":0.31697932376674953,"score_spread":0.28415492369483863,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2301343927","genre_codex":"review","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.4425522,0.5544241,0.000023891818,0.000020022813,0.000063920845,0.0017322095,0.0010265537,0.000026841084,0.00013022458],"genre_scores_gemma":[0.86912864,0.12962627,0.00015291812,0.00008141193,0.00007944767,0.00033451198,0.00040004659,0.00009978895,0.00009696209],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9964137,0.0003224387,0.001743615,0.00071079005,0.0003363928,0.0004730712],"domain_scores_gemma":[0.995792,0.00013423887,0.0031577877,0.00054480217,0.00022583679,0.00014538728],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00038219546,0.0005758665,0.002999204,0.0009210609,0.00008880946,0.000008798446,0.00021637481,0.0005650485,0.00011310001],"category_scores_gemma":[0.00012403032,0.00041094245,0.00037948173,0.00033318478,0.0002816923,0.00008152785,0.00011942594,0.0006556041,0.0000037366958],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0009311987,0.0059840637,0.22903451,0.07083523,0.0012005252,0.0003271947,0.004857143,0.0000030111448,0.44608545,0.0029726427,0.0002357539,0.23753326],"study_design_scores_gemma":[0.020797877,0.008563599,0.81982964,0.0820234,0.0057399184,0.00066831015,0.000797237,0.000025096391,0.03156368,0.0023179746,0.023542918,0.00413038],"about_ca_topic_score_codex":0.00012609063,"about_ca_topic_score_gemma":0.000032926964,"teacher_disagreement_score":0.5907951,"about_ca_system_score_codex":0.00021118048,"about_ca_system_score_gemma":0.0003509404,"threshold_uncertainty_score":0.99983424},"labels":[],"label_agreement":null},{"id":"W2312916985","doi":"10.1016/j.humpath.2016.03.007","title":"Intraepithelial lymphocytosis is a frequent finding in biopsies from ileal pouch–anal anastomoses","year":2016,"lang":"en","type":"article","venue":"Human Pathology","topic":"Microscopic Colitis","field":"Medicine","cited_by":8,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia; Mount Sinai Hospital","funders":"","keywords":"Intraepithelial lymphocyte; Gastroenterology; Pouch; Proctocolectomy; Medicine; Pathology; Lymphocytosis; Intraepithelial neoplasia; Internal medicine; Ulcerative colitis; Epithelium; Surgery; Disease; Cancer","score_opus":0.03152136516650751,"score_gpt":0.31100846870968896,"score_spread":0.27948710354318146,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2312916985","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9965982,0.00022460833,0.000099880504,0.0013416354,0.00026767128,0.00021766775,0.00017326456,0.00006791753,0.0010091471],"genre_scores_gemma":[0.9968532,0.00007342688,0.00061952247,0.0011823077,0.00037225895,0.000036086407,0.000023399,0.000027326549,0.00081250357],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9984385,0.00009517972,0.00039438874,0.00047055923,0.00014975885,0.00045164183],"domain_scores_gemma":[0.99924594,0.00011130852,0.00009421488,0.00039386144,0.000041353578,0.00011330851],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00013647598,0.00019541025,0.00045036574,0.00027978406,0.000073093106,0.000012975523,0.00014255964,0.0001741459,0.003360053],"category_scores_gemma":[0.000103190105,0.00015016795,0.00009114698,0.00012127529,0.00025400153,0.000058467227,0.0000993204,0.00013544231,0.00025614147],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013952423,0.0001337212,0.20094109,0.000027564582,0.000039687002,0.0014938237,0.0031041137,8.262909e-8,0.77765447,0.0005087474,0.0019985114,0.013958656],"study_design_scores_gemma":[0.006006889,0.0005592005,0.8649254,0.00046737594,0.00008388333,0.0004405895,0.0002646191,0.0000048205306,0.1211756,0.0021870616,0.0035636663,0.00032089444],"about_ca_topic_score_codex":0.0012946664,"about_ca_topic_score_gemma":0.001460216,"teacher_disagreement_score":0.6639843,"about_ca_system_score_codex":0.00036540077,"about_ca_system_score_gemma":0.00012089402,"threshold_uncertainty_score":0.997551},"labels":[],"label_agreement":null},{"id":"W2317556232","doi":"10.1016/j.humpath.2016.03.004","title":"Histologic analysis of eosinophils and mast cells of the gastrointestinal tract in healthy Canadian children","year":2016,"lang":"en","type":"article","venue":"Human Pathology","topic":"Eosinophilic Esophagitis","field":"Medicine","cited_by":38,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Children's Hospital of Eastern Ontario; University of Ottawa","funders":"","keywords":"Ileum; Gastroenterology; Cecum; Medicine; Duodenum; Lamina propria; Stomach; Eosinophilic gastroenteritis; Internal medicine; Population; Pathology; Gastrointestinal tract; Eosinophilia; Epithelium","score_opus":0.016161865900632868,"score_gpt":0.25861573417262373,"score_spread":0.24245386827199086,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2317556232","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99729276,0.00032276651,0.000008964372,0.0015415236,0.000028938864,0.00021966783,0.00008371716,0.0000070631545,0.0004945818],"genre_scores_gemma":[0.999233,0.000020119445,0.0002292225,0.000391662,0.000021107104,0.0000048842917,0.0000085359225,0.000009805137,0.00008162925],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9988124,0.00013950859,0.0003993444,0.00025819152,0.000103907754,0.0002866419],"domain_scores_gemma":[0.9991461,0.000083641964,0.00019664863,0.00038535078,0.000056162433,0.00013209612],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00024227412,0.00011609855,0.00051643635,0.0005688544,0.00004062249,0.0000013404914,0.00012845953,0.00008016383,0.00018466597],"category_scores_gemma":[0.000093400864,0.00007247634,0.00009827893,0.0003460429,0.00048921036,0.000021344302,0.00003428903,0.0001421235,0.0000026286932],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000030913478,0.000071506016,0.95216376,0.000017283885,0.00002200302,0.00013747529,0.00014004619,0.0000017693507,0.04650211,0.00038322457,0.00005535901,0.00047456328],"study_design_scores_gemma":[0.0008401926,0.00064234197,0.9963927,0.000073663105,0.00022733581,0.0007430529,0.000013129293,0.0000037030122,0.0008194159,0.00018030565,0.000009174233,0.000054968357],"about_ca_topic_score_codex":0.009727361,"about_ca_topic_score_gemma":0.041669525,"teacher_disagreement_score":0.045682695,"about_ca_system_score_codex":0.00015162514,"about_ca_system_score_gemma":0.00017117459,"threshold_uncertainty_score":0.99686694},"labels":[],"label_agreement":null},{"id":"W2321363522","doi":"10.1016/j.humpath.2016.02.029","title":"Allograft pancreas: pale acinar nodules","year":2016,"lang":"en","type":"article","venue":"Human Pathology","topic":"Polyomavirus and related diseases","field":"Medicine","cited_by":7,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Canadian Society of Transplantation","keywords":"Pancreas; Pathology; Acinus; Parenchyma; Synaptophysin; Periodic acid–Schiff stain; Acinar cell; Nodule (geology); Staining; Medicine; Anatomy; Immunohistochemistry; Biology; Internal medicine","score_opus":0.01827657439864791,"score_gpt":0.2872618011563714,"score_spread":0.2689852267577235,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2321363522","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9852672,0.0016941814,0.0000657936,0.0010091771,0.00013326682,0.00013281683,0.000022034561,0.00015255317,0.0115229655],"genre_scores_gemma":[0.99177814,0.0002335775,0.00015975893,0.0006642673,0.00021219504,0.000019845314,0.000016428074,0.00002218642,0.006893625],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9991071,0.000056182787,0.00017676134,0.000262578,0.000094311115,0.00030304646],"domain_scores_gemma":[0.9993634,0.00003770305,0.000051064675,0.0003409455,0.000037482463,0.00016935694],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00008111037,0.00012717131,0.00024699952,0.00009002215,0.00009202664,0.000004237287,0.00007579104,0.00016405339,0.0010579193],"category_scores_gemma":[0.00006297013,0.00007278144,0.00011094038,0.000051376446,0.00023905584,0.000035420544,0.00004245,0.000089863686,0.00060518965],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002455729,0.0006387023,0.22280031,0.00006106126,0.0001449936,0.0045682187,0.00022766278,1.3657085e-7,0.7233037,0.010233281,0.013919717,0.023856692],"study_design_scores_gemma":[0.0047855536,0.0009669128,0.9029479,0.00024982958,0.00033298257,0.0014745295,0.00007338839,0.0000015841872,0.0075784293,0.004252411,0.076994814,0.00034168983],"about_ca_topic_score_codex":0.000009934277,"about_ca_topic_score_gemma":0.000008004494,"teacher_disagreement_score":0.71572524,"about_ca_system_score_codex":0.000019772328,"about_ca_system_score_gemma":0.000029903535,"threshold_uncertainty_score":0.9998552},"labels":[],"label_agreement":null},{"id":"W2330990642","doi":"10.1016/j.humpath.2016.03.002","title":"Tumor progression in DICER1-mutated cystic nephroma—witnessing the genesis of anaplastic sarcoma of the kidney","year":2016,"lang":"en","type":"article","venue":"Human Pathology","topic":"Renal and related cancers","field":"Biochemistry, Genetics and Molecular Biology","cited_by":43,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Jewish General Hospital","funders":"National Children's Research Centre; Fonds de Recherche du Québec - Santé; Health Research Board; Alex's Lemonade Stand Foundation for Childhood Cancer","keywords":"Anaplasia; Pathology; Sarcoma; Immunohistochemistry; Germline; Kidney; Biology; Cancer research; Medicine; Genetics","score_opus":0.007120939426665048,"score_gpt":0.25079491439178714,"score_spread":0.24367397496512208,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2330990642","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9985057,0.00066574506,0.00010551013,0.00022977564,0.0001345324,0.00014305297,0.000011666494,0.000004312087,0.00019969208],"genre_scores_gemma":[0.99959874,0.000045835986,0.000038474973,0.0001208903,0.00004322369,0.0000161381,0.0000072246653,0.000012660112,0.000116827796],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99904835,0.00020753793,0.00026894425,0.00020032893,0.000092606955,0.00018222982],"domain_scores_gemma":[0.99938387,0.000028212246,0.00020552315,0.00030037874,0.00004723721,0.00003475511],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015946792,0.00010641712,0.0001597238,0.000040985593,0.00007471005,0.0000027760132,0.00025120724,0.00011377221,0.00001630903],"category_scores_gemma":[0.000113464295,0.00004595186,0.00007437434,0.00012252516,0.0005111968,0.0000023193377,0.0001163614,0.00007387952,0.0000017125229],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010498643,0.000040825078,0.011693204,0.000032334043,0.000018901723,0.000018760265,0.00011011631,0.000020171656,0.9854532,0.0000816899,0.00016669882,0.0022591266],"study_design_scores_gemma":[0.0017649754,0.00068239024,0.23222293,0.0004966148,0.000065083914,0.00020940328,0.00011924277,0.000029432753,0.76283944,0.00060105685,0.00078247295,0.00018696772],"about_ca_topic_score_codex":0.000020323585,"about_ca_topic_score_gemma":0.000024863022,"teacher_disagreement_score":0.22261375,"about_ca_system_score_codex":0.0000135589435,"about_ca_system_score_gemma":0.00009039337,"threshold_uncertainty_score":0.18835258},"labels":[],"label_agreement":null},{"id":"W2336353198","doi":"10.1016/j.humpath.2016.03.018","title":"Hepatic small vessel neoplasm, a rare infiltrative vascular neoplasm of uncertain malignant potential","year":2016,"lang":"en","type":"article","venue":"Human Pathology","topic":"Vascular Tumors and Angiosarcomas","field":"Medicine","cited_by":66,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ottawa Hospital","funders":"National Institute of Diabetes and Digestive and Kidney Diseases","keywords":"Neoplasm; Pathology; Medicine; Radiology","score_opus":0.01883353518569758,"score_gpt":0.25267648615152544,"score_spread":0.23384295096582786,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2336353198","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9950203,0.00048001987,0.002383047,0.00044903046,0.00014779923,0.00037417494,0.000023812765,0.0000632009,0.0010586432],"genre_scores_gemma":[0.9974245,0.000080977734,0.000993723,0.00025282303,0.00015102513,0.000037151614,0.0000373596,0.000040517796,0.0009819241],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9982529,0.00021137296,0.00045820593,0.0004256622,0.0002296959,0.00042216052],"domain_scores_gemma":[0.9988963,0.00006124157,0.00018145364,0.0005600006,0.00015221725,0.00014881005],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00027532212,0.00024939814,0.00064776896,0.00018339981,0.000098413126,0.0000076184865,0.0001625859,0.00017602078,0.00026705454],"category_scores_gemma":[0.00010037279,0.00016399626,0.00037959425,0.0001371587,0.00029317715,0.000042446176,0.000086026754,0.00014961294,0.000078258774],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00016754243,0.00059898593,0.045583777,0.0004243264,0.0005922307,0.0074351304,0.0021096766,0.00001608066,0.92518425,0.009297833,0.00094003463,0.007650126],"study_design_scores_gemma":[0.035505626,0.007227855,0.73635596,0.003302208,0.0026500965,0.013277827,0.0020008748,0.00035706125,0.16605003,0.019442778,0.011529514,0.0023001516],"about_ca_topic_score_codex":0.000040562376,"about_ca_topic_score_gemma":0.000034420507,"teacher_disagreement_score":0.75913423,"about_ca_system_score_codex":0.00004064663,"about_ca_system_score_gemma":0.00011088571,"threshold_uncertainty_score":0.6687573},"labels":[],"label_agreement":null},{"id":"W2378446889","doi":"10.1016/j.humpath.2016.03.023","title":"Coexisting pituicytoma and pituitary adenoma: a second coincidence?","year":2016,"lang":"en","type":"letter","venue":"Human Pathology","topic":"Pituitary Gland Disorders and Treatments","field":"Medicine","cited_by":6,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Health Sciences Centre; Sunnybrook Health Science Centre; University of Toronto","funders":"","keywords":"Pituitary adenoma; Adenoma; Coincidence; Medicine; Pathology","score_opus":0.030051623910514146,"score_gpt":0.28656170431455774,"score_spread":0.2565100804040436,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2378446889","genre_codex":"empirical","genre_gemma":"commentary","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.64891976,0.00957009,0.00004536469,0.27933496,0.0007434141,0.0013618488,0.00051704556,0.00034383216,0.059163712],"genre_scores_gemma":[0.3329831,0.00017748488,0.00036841177,0.62225765,0.005446023,0.00015484451,0.0013247979,0.00016969399,0.037118],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99777037,0.00011099609,0.0004142209,0.0008120201,0.00022329272,0.000669124],"domain_scores_gemma":[0.9988918,0.00013722263,0.00020218937,0.0005612102,0.000068486006,0.00013912168],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00012629584,0.00048395657,0.0008967525,0.00026058382,0.00024130034,0.000021141072,0.00013977085,0.000892512,0.0014387114],"category_scores_gemma":[0.000043081833,0.00035749536,0.00015214761,0.000054626584,0.0003931097,0.0000736333,0.00014005727,0.00091638754,0.00024638523],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006083095,0.00006894997,0.015928319,0.00041470575,0.00019829314,0.103020996,0.00023778765,4.26069e-9,0.00039134498,0.00009677921,0.8774594,0.0021225656],"study_design_scores_gemma":[0.008743829,0.0022541883,0.07549502,0.0006480195,0.0007984135,0.031526413,0.00005830041,0.000001512477,0.000048635073,0.009487133,0.86998606,0.0009524985],"about_ca_topic_score_codex":0.000024523508,"about_ca_topic_score_gemma":0.00005032067,"teacher_disagreement_score":0.3429227,"about_ca_system_score_codex":0.000078162986,"about_ca_system_score_gemma":0.00009853976,"threshold_uncertainty_score":0.9998877},"labels":[],"label_agreement":null},{"id":"W2435249736","doi":"10.1016/j.humpath.2016.05.023","title":"Ileal “carcinoid” tumors—small size belies deadly intent: high rate of nodal metastasis in tumors ≤1 cm in size","year":2016,"lang":"en","type":"article","venue":"Human Pathology","topic":"Neuroendocrine Tumor Research Advances","field":"Medicine","cited_by":48,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"London Health Sciences Centre; Mount Sinai Hospital; Vancouver General Hospital; Western University","funders":"","keywords":"Metastasis; Submucosa; Ileum; Medicine; Lymph node; Neuroendocrine tumors; Carcinoid tumors; Lymph; Lymphadenectomy; Jejunum; Pathology; Internal medicine; Gastroenterology; Cancer","score_opus":0.02975177834012558,"score_gpt":0.3077868670871462,"score_spread":0.2780350887470206,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2435249736","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99590504,0.00022366762,0.000010434789,0.0022955313,0.00010181976,0.0006282483,0.00004987704,0.000061809165,0.00072359794],"genre_scores_gemma":[0.99645483,0.00008412623,0.0009438382,0.00042298943,0.000085627566,0.00012522173,0.000008398891,0.00006320805,0.001811729],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9964378,0.0006449087,0.00093319867,0.0007097528,0.00029246215,0.0009818722],"domain_scores_gemma":[0.99756604,0.0011686264,0.00024314602,0.00064548786,0.00016988568,0.0002068061],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0006120219,0.0003476535,0.001086076,0.0005500711,0.0000502811,0.000009312317,0.00038970055,0.000036093646,0.000679543],"category_scores_gemma":[0.0032273468,0.0002568353,0.00014450306,0.0004198311,0.0007431657,0.00014416841,0.00033403304,0.0005280237,0.00008038559],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0013972393,0.00073028915,0.30495942,0.00037667307,0.000037408874,0.051774286,0.0004972272,0.000006870834,0.6329703,0.0046888255,0.0002288725,0.0023326236],"study_design_scores_gemma":[0.007510063,0.0020824515,0.8786318,0.0004385618,0.000037814556,0.0020833618,0.0003768877,0.000002730937,0.10260485,0.005622259,0.00029899264,0.00031027663],"about_ca_topic_score_codex":0.00046241892,"about_ca_topic_score_gemma":0.0020055,"teacher_disagreement_score":0.57367235,"about_ca_system_score_codex":0.0001516081,"about_ca_system_score_gemma":0.00013639135,"threshold_uncertainty_score":0.9999884},"labels":[],"label_agreement":null},{"id":"W2479207946","doi":"10.1016/j.humpath.2016.07.002","title":"A dual prognostic role for the TGFβ receptors in human breast cancer","year":2016,"lang":"en","type":"article","venue":"Human Pathology","topic":"TGF-β signaling in diseases","field":"Biochemistry, Genetics and Molecular Biology","cited_by":13,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University Health Centre","funders":"Canadian Institutes of Health Research","keywords":"Breast cancer; Transforming growth factor; Tissue microarray; Cancer research; Receptor; Cancer; Breast carcinoma; Medicine; Metastasis; Internal medicine; CA 15-3; Oncology; CA15-3; Biology; Pathology","score_opus":0.01370869022048246,"score_gpt":0.28362550603496833,"score_spread":0.2699168158144859,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2479207946","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99776864,0.00094221847,0.0001921948,0.0003685867,0.00015897067,0.00035612055,0.0000916971,0.000020137433,0.00010145095],"genre_scores_gemma":[0.9977671,0.000020302281,0.00004809416,0.0002176962,0.0004778499,0.000508757,0.000046344096,0.000030905296,0.0008829892],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99898493,0.000080817365,0.00019945824,0.00035768267,0.00006386656,0.00031324808],"domain_scores_gemma":[0.999446,0.000053931286,0.00007687298,0.0003160657,0.000058863196,0.000048312242],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00017094886,0.00014062507,0.0001300885,0.000041818785,0.00015540431,0.0000112264015,0.00022067959,0.00013663292,0.0001674205],"category_scores_gemma":[0.00008088347,0.000088928384,0.000074114425,0.00003911025,0.00021324314,0.0000028348077,0.00009654274,0.000055518874,0.000010157814],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007763152,0.0001140713,0.080382384,0.000014818053,0.000030736213,0.000010707109,0.00013181698,0.000011997581,0.9110853,0.00034567228,0.0029040081,0.004890847],"study_design_scores_gemma":[0.004636072,0.00097165594,0.6910519,0.00017331763,0.00014098737,0.00018032563,0.00026384235,0.000010513983,0.21803379,0.0024240839,0.08123085,0.000882644],"about_ca_topic_score_codex":0.000024281522,"about_ca_topic_score_gemma":0.00036231327,"teacher_disagreement_score":0.6930515,"about_ca_system_score_codex":0.000021343012,"about_ca_system_score_gemma":0.000058250243,"threshold_uncertainty_score":0.36263943},"labels":[],"label_agreement":null},{"id":"W2516729828","doi":"10.1016/j.humpath.2016.08.007","title":"Progression of atypical extraventricular neurocytoma to anaplastic ganglioglioma","year":2016,"lang":"en","type":"article","venue":"Human Pathology","topic":"Glioma Diagnosis and Treatment","field":"Medicine","cited_by":15,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hamilton Health Sciences; McMaster University","funders":"","keywords":"Synaptophysin; Ganglioglioma; Glial fibrillary acidic protein; Pathology; Central neurocytoma; Cyclopamine; Chromogranin A; Enolase; Sonic hedgehog; Biology; Cancer research; Immunohistochemistry; Medicine; Epilepsy; Magnetic resonance imaging; Neuroscience; Signal transduction","score_opus":0.020773653672951968,"score_gpt":0.3133516657956553,"score_spread":0.29257801212270335,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2516729828","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9981454,0.00015094713,0.00024289901,0.0007122887,0.0000910892,0.0003558343,0.0000071797585,0.000043137334,0.0002511967],"genre_scores_gemma":[0.9990607,0.0000064596657,0.0005729669,0.000146074,0.00007366926,0.00006200869,0.000005605191,0.000016901093,0.000055646105],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9990064,0.000055789187,0.00023994963,0.00028453337,0.00017008443,0.0002432722],"domain_scores_gemma":[0.99932367,0.000071196984,0.00006764272,0.0002948677,0.00007475339,0.00016785835],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00006942716,0.00012461511,0.00029564695,0.00025519013,0.000041908934,0.0000031308443,0.0000649431,0.00008659611,0.00029512742],"category_scores_gemma":[0.000109492066,0.00007171316,0.0000944611,0.00018400524,0.00008213768,0.000019007612,0.000056259098,0.0000434189,0.00014709475],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006770487,0.001341472,0.15418741,0.0000503179,0.000049376635,0.017490983,0.000117389725,6.628836e-7,0.79601103,0.003413975,0.002059732,0.024600605],"study_design_scores_gemma":[0.003300611,0.0049237786,0.8067503,0.00021544924,0.00010809285,0.0016313756,0.000010108631,0.0000023203809,0.18154263,0.0002915596,0.0011139268,0.00010984889],"about_ca_topic_score_codex":0.0000011972897,"about_ca_topic_score_gemma":0.0000049962373,"teacher_disagreement_score":0.65256286,"about_ca_system_score_codex":0.000031827905,"about_ca_system_score_gemma":0.0000161061,"threshold_uncertainty_score":0.3231438},"labels":[],"label_agreement":null},{"id":"W2533609417","doi":"10.1016/j.humpath.2016.09.028","title":"Spleen histology in children with sickle cell disease and hereditary spherocytosis: hints on the disease pathophysiology","year":2016,"lang":"en","type":"article","venue":"Human Pathology","topic":"Hemoglobinopathies and Related Disorders","field":"Medicine","cited_by":26,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hospital for Sick Children","funders":"","keywords":"Hereditary spherocytosis; Red pulp; Spleen; Pathology; White pulp; Sinusoid; Fibrosis; CD8; Pathophysiology; Biology; Histology; Spherocytosis; Marginal zone; Medicine; Immunology; Splenectomy; Immune system; Internal medicine; B cell; Antibody","score_opus":0.007274928261342998,"score_gpt":0.21199253108119936,"score_spread":0.20471760281985638,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2533609417","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9915149,0.0016055123,0.000009749628,0.0055767805,0.00007590411,0.0005410818,0.00004528396,0.000051276333,0.00057950156],"genre_scores_gemma":[0.9962838,0.000284512,0.00002229575,0.0028123155,0.00008994109,0.00007858397,0.00004247938,0.000028725428,0.00035732548],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99850076,0.00022193643,0.00023503359,0.0005184956,0.00011195533,0.00041183655],"domain_scores_gemma":[0.999024,0.000087964596,0.000084314,0.00049645366,0.00002752822,0.0002797496],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00011235284,0.00023941582,0.00034955773,0.00009604485,0.00013227868,0.00000414316,0.00012645294,0.000150943,0.00028950901],"category_scores_gemma":[0.00006325503,0.000117638316,0.000063048086,0.00008387232,0.0006569959,0.000036098198,0.00007948374,0.00027607827,0.00010328719],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.003379694,0.001453297,0.9564003,0.00010479661,0.00016104088,0.0065188766,0.0006787199,0.00001366184,0.012951336,0.0031567973,0.008275282,0.00690621],"study_design_scores_gemma":[0.0039508143,0.0010124621,0.9906927,0.00011921928,0.00021836867,0.0001606425,0.00010957954,0.0000062586255,0.00009105009,0.0030354138,0.00036433392,0.00023918126],"about_ca_topic_score_codex":0.000024071873,"about_ca_topic_score_gemma":0.000023151664,"teacher_disagreement_score":0.03429239,"about_ca_system_score_codex":0.000047700232,"about_ca_system_score_gemma":0.00008130154,"threshold_uncertainty_score":0.47971514},"labels":[],"label_agreement":null},{"id":"W2539599065","doi":"10.1016/j.humpath.2016.10.005","title":"Loss of BRCA1-associated protein 1 ( BAP1 ) expression is rare in non–small cell lung cancer","year":2016,"lang":"en","type":"article","venue":"Human Pathology","topic":"Cancer Research and Treatments","field":"Biochemistry, Genetics and Molecular Biology","cited_by":31,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"BC Cancer Agency; Abbotsford Veterinary Clinic; Vancouver General Hospital","funders":"","keywords":"BAP1; Lung cancer; Cancer research; Lung; Protein expression; Biology; Expression (computer science); Medicine; Pathology; Oncology; Internal medicine; Genetics; Gene; Melanoma; Computer science","score_opus":0.012991216567106202,"score_gpt":0.29450371365967887,"score_spread":0.28151249709257264,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2539599065","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99791497,0.0007930548,0.000052684176,0.0000876855,0.00003010084,0.00035896484,0.00013312433,0.0000053859712,0.000624047],"genre_scores_gemma":[0.99663675,0.00017512646,0.000042772645,0.000061732746,0.000044693832,0.00020652552,0.000048777714,0.000018734712,0.0027648658],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9989916,0.00009506473,0.00018203733,0.0003351813,0.00008626989,0.00030984252],"domain_scores_gemma":[0.99949616,0.0000067207934,0.00009847396,0.0002745776,0.00006391759,0.00006016309],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009620731,0.00012306217,0.0001745571,0.00006056372,0.00004063248,0.000004123435,0.0001571975,0.00017568607,0.00022133713],"category_scores_gemma":[0.000028444347,0.00009093522,0.00006290981,0.000055018165,0.000086984604,0.0000031381587,0.00013000649,0.000064119056,0.000006888358],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007529795,0.00014421172,0.11143096,0.000037639824,0.000016296386,0.00007035989,0.00010849192,5.4637127e-7,0.88659763,0.000004559585,0.0010225307,0.00049148727],"study_design_scores_gemma":[0.0026362422,0.0003167987,0.0465515,0.00014448797,0.0000079580705,0.0000035005883,0.000013340017,0.0000013692692,0.9496024,0.00008009981,0.0005203476,0.000121950616],"about_ca_topic_score_codex":0.00027046955,"about_ca_topic_score_gemma":0.0013399323,"teacher_disagreement_score":0.064879455,"about_ca_system_score_codex":0.000054785876,"about_ca_system_score_gemma":0.000093156086,"threshold_uncertainty_score":0.37082306},"labels":[],"label_agreement":null},{"id":"W2554218214","doi":"10.1016/j.humpath.2016.10.023","title":"Microcystic, elongated, and fragmented pattern invasion is mainly associated with isolated tumor cell pattern metastases in International Federation of Gynecology and Obstetrics grade I endometrioid endometrial cancer","year":2016,"lang":"en","type":"article","venue":"Human Pathology","topic":"Endometrial and Cervical Cancer Treatments","field":"Medicine","cited_by":25,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Centre Hospitalier de l’Université de Montréal","funders":"","keywords":"Medicine; Endometrial cancer; Lymphovascular invasion; Lymph node; Lymphadenectomy; Gynecologic oncology; Metastasis; Lymph; Infiltration (HVAC); Oncology; Sentinel lymph node; Cancer; Gynecology; Internal medicine; Breast cancer; Pathology","score_opus":0.02410504917316071,"score_gpt":0.27769171748711524,"score_spread":0.25358666831395454,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2554218214","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99670696,0.0011185617,0.0005102647,0.00040177192,0.00027459767,0.00057497114,0.00032212082,0.000026244792,0.00006449748],"genre_scores_gemma":[0.9981413,0.0007571227,0.00008273779,0.0005987455,0.000057623463,0.00007589157,0.0001400355,0.0000275813,0.00011898551],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99810654,0.00023567675,0.0005641477,0.0004970747,0.00026946372,0.00032711876],"domain_scores_gemma":[0.99753034,0.0016418982,0.00037084433,0.00015108577,0.00018214739,0.00012368929],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00027165306,0.0002524105,0.00068773876,0.0010549924,0.00007644076,0.000020029729,0.00008775196,0.00016579562,0.0005005505],"category_scores_gemma":[0.0010838496,0.00016937456,0.000057249654,0.00066056347,0.00018588429,0.000096398864,0.00009298852,0.00018258457,0.0000037838547],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0009162701,0.0010796583,0.7901591,0.00008704649,0.00034333288,0.00094725017,0.00048090497,6.0764984e-7,0.17019902,0.000008082531,0.000058058267,0.03572065],"study_design_scores_gemma":[0.08782708,0.0062046517,0.8036631,0.00046488442,0.00059899886,0.0002864134,0.00022974728,0.000052548476,0.09975803,0.00016925648,0.00027894432,0.00046639444],"about_ca_topic_score_codex":0.0003760263,"about_ca_topic_score_gemma":0.00050021603,"teacher_disagreement_score":0.08691081,"about_ca_system_score_codex":0.000266854,"about_ca_system_score_gemma":0.000067771136,"threshold_uncertainty_score":0.6906894},"labels":[],"label_agreement":null},{"id":"W2562959633","doi":"10.1016/j.humpath.2016.12.005","title":"Estrogen receptor α (ERα) status evaluation using RNAscope in situ hybridization: a reliable and complementary method for IHC in breast cancer tissues","year":2016,"lang":"en","type":"article","venue":"Human Pathology","topic":"Molecular Biology Techniques and Applications","field":"Biochemistry, Genetics and Molecular Biology","cited_by":23,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"Immunohistochemistry; Breast cancer; Estrogen receptor; In situ hybridization; Cancer; Estrogen; Pathology; Progesterone receptor; Biology; Medicine; Cancer research; Oncology; Internal medicine; Messenger RNA; Gene","score_opus":0.034306153674789744,"score_gpt":0.3843999314453377,"score_spread":0.35009377777054795,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2562959633","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9662199,0.00090373,0.031370718,0.0005503012,0.00003148201,0.00068387674,0.00015764755,0.00001010206,0.000072241215],"genre_scores_gemma":[0.9459631,0.000577752,0.051846337,0.00031599298,0.000095066986,0.00061760424,0.0005037516,0.000024507632,0.000055912846],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99896234,0.00012706962,0.00022958661,0.0003927762,0.000048689886,0.00023954941],"domain_scores_gemma":[0.9995839,0.000011217281,0.00008598972,0.0002011897,0.00008134783,0.00003634046],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00043130244,0.00011257641,0.00014980932,0.000071842216,0.00006495701,0.0000065545423,0.000080745835,0.00011987435,0.00007208932],"category_scores_gemma":[0.000015724745,0.00009838473,0.00002593712,0.00006475737,0.00007137061,0.0000051802667,0.000077843724,0.000040840638,8.123926e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000038789953,0.000036584563,0.026305523,0.000007633105,0.000010070284,0.0000014870002,0.000029312689,0.00001843645,0.96560764,0.000799305,0.00044809887,0.006697091],"study_design_scores_gemma":[0.005828108,0.0006282547,0.059019946,0.00014442246,0.00010664205,0.00017252647,0.0001380698,0.0008455795,0.8753047,0.0052691316,0.05180038,0.0007422425],"about_ca_topic_score_codex":0.00017893978,"about_ca_topic_score_gemma":0.0004704935,"teacher_disagreement_score":0.090302974,"about_ca_system_score_codex":0.000056840323,"about_ca_system_score_gemma":0.00006169253,"threshold_uncertainty_score":0.40120128},"labels":[],"label_agreement":null},{"id":"W2595167791","doi":"10.1016/j.humpath.2017.02.023","title":"An unusual primary malignant tumor of the stomach: fetal gutlike gastric adenocarcinoma with “blastoma”-like component","year":2017,"lang":"en","type":"article","venue":"Human Pathology","topic":"Gastrointestinal disorders and treatments","field":"Medicine","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; University Health Network; Memorial University of Newfoundland; Health Sciences Centre","funders":"","keywords":"Pathology; Glypican 3; Stromal cell; Adenocarcinoma; Biology; Immunohistochemistry; Stomach; Cancer; Medicine","score_opus":0.021394376642684763,"score_gpt":0.2725658948863176,"score_spread":0.2511715182436328,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2595167791","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99763274,0.00012312813,0.00004543028,0.00017507037,0.0001027686,0.0005385964,0.000026161619,0.00003634796,0.0013197436],"genre_scores_gemma":[0.9983857,0.000001923726,0.00093837356,0.00025337632,0.00006276409,0.00003818044,0.000038474598,0.0000344525,0.00024670688],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99863887,0.0000986217,0.0002683838,0.0003811967,0.00026008964,0.00035282498],"domain_scores_gemma":[0.9983637,0.000015261136,0.0003471266,0.0010488583,0.00009273971,0.00013233321],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00010793749,0.00023427908,0.0004356803,0.000091181566,0.00040268875,0.0000210355,0.0003515907,0.000049310816,0.00004079856],"category_scores_gemma":[0.000015220644,0.00014293332,0.000110601184,0.000052949985,0.0006156683,0.00008950957,0.00014997812,0.00020099508,0.000017311673],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00034277944,0.0009926576,0.9728685,0.00006248167,0.000050397102,0.0023471627,0.00021433446,0.0000021086166,0.022185395,0.00021160644,0.00008248652,0.00064007187],"study_design_scores_gemma":[0.003320318,0.00426036,0.9850999,0.00012663993,0.00021853304,0.006179436,0.00012496981,0.00003747783,0.0004255346,0.00006985513,0.00002320397,0.00011375109],"about_ca_topic_score_codex":0.00015353874,"about_ca_topic_score_gemma":0.00008206711,"teacher_disagreement_score":0.02175986,"about_ca_system_score_codex":0.000049198366,"about_ca_system_score_gemma":0.000078277306,"threshold_uncertainty_score":0.5828652},"labels":[],"label_agreement":null},{"id":"W2597284738","doi":"10.1016/j.humpath.2017.03.004","title":"Diagnostic criteria for oncocytic renal neoplasms: a survey of urologic pathologists","year":2017,"lang":"en","type":"article","venue":"Human Pathology","topic":"Renal cell carcinoma treatment","field":"Medicine","cited_by":112,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University; Calgary Laboratory Services; University of Calgary","funders":"","keywords":"Oncocytoma; Renal oncocytoma; Cytokeratin; Pathology; Medicine; Chromophobe cell; Renal cell carcinoma; Clear cell; Immunohistochemistry","score_opus":0.13060137246864204,"score_gpt":0.3811158302220721,"score_spread":0.25051445775343006,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2597284738","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99585813,0.00033671755,0.00023646044,0.00019674783,0.00025734596,0.000814522,0.00011739314,0.000044024768,0.002138678],"genre_scores_gemma":[0.9974921,0.000030607494,0.00128491,0.0001710198,0.0001239365,0.00018849663,0.00021119436,0.00003310586,0.00046468398],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99822646,0.0002658952,0.00045953714,0.00049284956,0.00014458323,0.00041064995],"domain_scores_gemma":[0.9972069,0.0008402687,0.00041750234,0.0011624801,0.00024730468,0.00012552647],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000846895,0.00024037599,0.0007387669,0.00011804586,0.00027467794,0.00002499129,0.00029554532,0.00023169446,0.0001615323],"category_scores_gemma":[0.004020769,0.00019411524,0.00016822622,0.000036183195,0.0006114785,0.000050527164,0.00014218995,0.00016294196,0.000041975607],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0011789682,0.0007552341,0.9107049,0.00032461426,0.00011348692,0.0066163694,0.00043136257,0.0000044641906,0.07468112,0.00075849105,0.0023068695,0.0021241072],"study_design_scores_gemma":[0.003069729,0.004228388,0.9843024,0.000053604956,0.00019899267,0.0008458381,0.000009755777,0.0000248201,0.0058307764,0.0010903361,0.00019214039,0.00015322205],"about_ca_topic_score_codex":0.00020946747,"about_ca_topic_score_gemma":0.00033267494,"teacher_disagreement_score":0.07359748,"about_ca_system_score_codex":0.00007855443,"about_ca_system_score_gemma":0.000100717385,"threshold_uncertainty_score":0.791579},"labels":[],"label_agreement":null},{"id":"W2612084341","doi":"10.1016/j.humpath.2017.04.026","title":"BRAF V600E mutation in pediatric intracranial and cranial juvenile xanthogranuloma","year":2017,"lang":"en","type":"article","venue":"Human Pathology","topic":"Histiocytic Disorders and Treatments","field":"Medicine","cited_by":42,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"SickKids Foundation; Hospital for Sick Children; University of Toronto","funders":"National Research Council of Thailand","keywords":"Juvenile xanthogranuloma; Medicine; Histiocytosis; Langerhans cell histiocytosis; Pathology; Erdheim–Chester disease; Lesion; Mutation; Histiocyte; Dermatology; Disease; Biology","score_opus":0.017167218186608414,"score_gpt":0.30566987033961995,"score_spread":0.2885026521530115,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2612084341","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9925763,0.00015386636,0.00003886061,0.00025301368,0.00016616636,0.00022019086,0.000006482727,0.000024347002,0.0065607848],"genre_scores_gemma":[0.9989032,0.000052786967,0.00035543082,0.00008319059,0.00019237369,0.000020840278,0.00002873962,0.00001422392,0.00034917743],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99925154,0.000032558844,0.0001951284,0.00024689085,0.00008309933,0.00019078523],"domain_scores_gemma":[0.9995424,0.000019066574,0.00009707008,0.00025205716,0.000024569577,0.00006481127],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00011542812,0.000108317225,0.00025272762,0.00012834893,0.00025814827,0.000026665432,0.00006308747,0.00011131927,0.00011217428],"category_scores_gemma":[0.00008876223,0.00010113541,0.000034589153,0.000032179174,0.00015074112,0.00006894178,0.000032932243,0.00011890096,0.00004907999],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00020667765,0.00060289254,0.95166415,0.00009239369,0.000017015014,0.011387178,0.0013846619,4.9921874e-7,0.0008753489,0.0014046619,0.00021690474,0.032147594],"study_design_scores_gemma":[0.0058147144,0.0004582302,0.99097097,0.00001177477,0.00009118279,0.00059025444,0.000033723165,0.00004008436,0.000016572836,0.0017167734,0.0001663084,0.000089400375],"about_ca_topic_score_codex":0.00009816456,"about_ca_topic_score_gemma":0.00042206576,"teacher_disagreement_score":0.03930681,"about_ca_system_score_codex":0.00002378513,"about_ca_system_score_gemma":0.000034533517,"threshold_uncertainty_score":0.41241825},"labels":[],"label_agreement":null},{"id":"W2619389796","doi":"10.1016/j.humpath.2017.05.013","title":"Metastatic thyroid carcinoma without identifiable primary tumor within the thyroid gland: a retrospective study of a rare phenomenon","year":2017,"lang":"en","type":"article","venue":"Human Pathology","topic":"Thyroid Cancer Diagnosis and Treatment","field":"Medicine","cited_by":48,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Health Sciences Centre; Sunnybrook Health Science Centre","funders":"National Cancer Institute","keywords":"Thyroid; Medicine; Pathology; Thyroid carcinoma; Anaplastic carcinoma; Metastasis; Immunohistochemistry; Carcinoma; Internal medicine; Cancer","score_opus":0.02994340374807897,"score_gpt":0.3029314053157482,"score_spread":0.2729880015676692,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2619389796","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99176526,0.0015606171,0.000007707141,0.00022684017,0.00023335869,0.0017698491,0.000045322155,0.000042938802,0.004348103],"genre_scores_gemma":[0.99790543,0.000022066515,0.0001517046,0.0002592796,0.00014372703,0.00047284694,0.000027490461,0.000048756607,0.0009686978],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9979042,0.00023193347,0.0005204427,0.0006046828,0.00038548151,0.00035326908],"domain_scores_gemma":[0.9972582,0.000043757034,0.00072931015,0.0016986693,0.00016468916,0.00010537596],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005758456,0.00030493375,0.00091895176,0.00011683286,0.00070070446,0.00006997165,0.0004116921,0.00004844835,0.000087261506],"category_scores_gemma":[0.00008507361,0.0001967256,0.00013907214,0.00008101031,0.00037576837,0.00012336,0.00023521489,0.00030130733,0.000025245212],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000509263,0.002747244,0.9645597,0.000115949326,0.0004994601,0.001963516,0.01224036,0.0000051964244,0.015072693,0.0012409076,0.0009308387,0.00011490133],"study_design_scores_gemma":[0.008961353,0.0063133617,0.97765386,0.000062471256,0.0008746135,0.00035438206,0.00270097,0.0000077067825,0.0014812592,0.0013559748,0.000047799676,0.0001862615],"about_ca_topic_score_codex":0.00069619925,"about_ca_topic_score_gemma":0.0008306055,"teacher_disagreement_score":0.013591434,"about_ca_system_score_codex":0.00023366454,"about_ca_system_score_gemma":0.00012666256,"threshold_uncertainty_score":0.8022237},"labels":[],"label_agreement":null},{"id":"W2652410581","doi":"10.1016/j.humpath.2017.06.006","title":"Value of upper endoscopic biopsies in predicting medical refractoriness in pediatric patients with ulcerative colitis","year":2017,"lang":"en","type":"article","venue":"Human Pathology","topic":"Inflammatory Bowel Disease","field":"Biochemistry, Genetics and Molecular Biology","cited_by":12,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute for Clinical Evaluative Sciences; University of Ottawa; Children's Hospital of Eastern Ontario","funders":"","keywords":"Medicine; Gastroenterology; Internal medicine; Ulcerative colitis; Intraepithelial lymphocyte; Refractory (planetary science); Stomach; Duodenal bulb; Duodenum; Antrum; Pathology; Disease; Biology; Epithelium","score_opus":0.007078860967260191,"score_gpt":0.26197910458211376,"score_spread":0.2549002436148536,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2652410581","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9987329,0.000027400478,0.000006241519,0.000017715529,0.0001188261,0.00020992401,0.00002515515,0.0000050278686,0.00085681246],"genre_scores_gemma":[0.9995712,0.000018919778,0.00005945987,0.000034722605,0.00014606792,0.000043763226,0.0000649128,0.00001613791,0.00004478745],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9988518,0.00016017383,0.00028415382,0.0003012891,0.00016117185,0.00024141422],"domain_scores_gemma":[0.99922645,0.000014663079,0.0002021431,0.0004063529,0.00008365506,0.000066714725],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00023202757,0.00013005377,0.00019165639,0.000098917466,0.000090698915,0.000010915144,0.0002707149,0.00019528686,0.000034616303],"category_scores_gemma":[0.00042476377,0.00011843722,0.000028379554,0.00003306641,0.0002253837,0.000009966187,0.00016913626,0.0001415604,0.0000024059877],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00017393405,0.00012807178,0.99823374,0.000049620005,0.0000061475903,0.00029811705,0.00019650738,0.0000056074596,0.0005716268,0.00024076013,0.000011515726,0.00008433837],"study_design_scores_gemma":[0.0022007858,0.00018621354,0.996646,0.00003405779,0.000009143372,0.0000031884504,0.000031452106,0.0000074587847,0.00069842907,0.000059580078,0.000020102476,0.00010358365],"about_ca_topic_score_codex":0.000037871767,"about_ca_topic_score_gemma":0.00095971534,"teacher_disagreement_score":0.0020268515,"about_ca_system_score_codex":0.000019569334,"about_ca_system_score_gemma":0.00012210316,"threshold_uncertainty_score":0.48297298},"labels":[],"label_agreement":null},{"id":"W2734458665","doi":"10.1016/j.humpath.2017.07.004","title":"The impact of knowledge transfer on the detection of venous invasion in colorectal cancer","year":2017,"lang":"en","type":"article","venue":"Human Pathology","topic":"Colorectal Cancer Surgical Treatments","field":"Medicine","cited_by":8,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Royal Victoria Regional Health Centre; South Bruce Grey Health Centre; London Health Sciences Centre; Grand River Hospital; St. Michael's Hospital; Health Sciences Centre; Mount Sinai Hospital; Hamilton Health Sciences; University of Toronto","funders":"","keywords":"Colorectal cancer; Medicine; Odds ratio; Elastin; Stage (stratigraphy); Internal medicine; Cancer; Stain; Metastasis; Oncology; Pathology; Staining; Biology","score_opus":0.05686992438670515,"score_gpt":0.3681159596351532,"score_spread":0.31124603524844807,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2734458665","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9942125,0.00038576624,0.0000017282508,0.000110587585,0.0001231372,0.0003913861,0.0000085529155,0.0000065242916,0.004759825],"genre_scores_gemma":[0.99966633,0.000115293675,6.498648e-7,0.000008676577,0.00004137545,0.000090037836,0.000001328104,0.000010167037,0.00006612455],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9993126,0.00011976969,0.00018959616,0.00014045523,0.00008413565,0.00015344526],"domain_scores_gemma":[0.999356,0.00017850948,0.000081583115,0.00029840562,0.000057323025,0.000028180462],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002430365,0.000094484996,0.00026452533,0.000051018535,0.00020218606,0.000004776964,0.00013596899,0.000082704384,0.00007423504],"category_scores_gemma":[0.00010555812,0.000046559613,0.00013092677,0.000058097652,0.00033182825,0.000019060708,0.000030757597,0.00016883657,0.0000055195933],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0043757195,0.0013380828,0.19557898,0.000049628816,0.00016511127,0.00015786207,0.0035342716,0.000014307957,0.73141915,0.00060757314,0.00003703219,0.0627223],"study_design_scores_gemma":[0.0012374691,0.0033621246,0.8988251,0.000063388696,0.00002801926,0.00002521389,0.00002776069,0.000019376976,0.0960886,0.00024635697,0.00003955305,0.000036998208],"about_ca_topic_score_codex":0.0007351948,"about_ca_topic_score_gemma":0.0032669334,"teacher_disagreement_score":0.7032462,"about_ca_system_score_codex":0.00017104954,"about_ca_system_score_gemma":0.000073341536,"threshold_uncertainty_score":0.18986459},"labels":[],"label_agreement":null},{"id":"W2742791196","doi":"10.1016/j.humpath.2017.07.015","title":"The differential diagnosis between pleural sarcomatoid mesothelioma and spindle cell/pleomorphic (sarcomatoid) carcinomas of the lung: evidence-based guidelines from the International Mesothelioma Panel and the MESOPATH National Reference Center","year":2017,"lang":"en","type":"review","venue":"Human Pathology","topic":"Occupational and environmental lung diseases","field":"Medicine","cited_by":67,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"Cytokeratin; Pathology; Mesothelioma; Immunophenotyping; Differential diagnosis; Medicine; Immunohistochemistry; Antigen","score_opus":0.30047527487123804,"score_gpt":0.3975264583698556,"score_spread":0.09705118349861758,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2742791196","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.1290891,0.86337143,0.0000065955687,0.003969064,0.0003082981,0.0012839736,0.0017656015,0.000020933076,0.00018498687],"genre_scores_gemma":[0.40440825,0.59307486,0.000032567346,0.0005259265,0.0006503817,0.00036166882,0.00055262336,0.00005195118,0.0003417596],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99636596,0.00081450085,0.0010186323,0.00059317995,0.0008994222,0.00030827874],"domain_scores_gemma":[0.9953561,0.002387335,0.0010430194,0.00093481934,0.00017296801,0.00010579292],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007644647,0.0005170953,0.0011398587,0.00010177366,0.0009862591,0.0001327728,0.0012911805,0.00023696921,0.0001696957],"category_scores_gemma":[0.0006078836,0.00021310487,0.0004940715,0.000082663195,0.00213785,0.000091116875,0.00077323517,0.00048188417,0.000013070037],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00048570844,0.0003798911,0.9237838,0.0019920801,0.0009564068,0.0000781096,0.0003253647,9.0585564e-7,0.0000846728,0.003361296,0.009506741,0.059045035],"study_design_scores_gemma":[0.003237223,0.00014065522,0.8222016,0.0059090583,0.0022476783,0.00021321051,0.000057747842,0.000090724185,0.000050366005,0.0016119784,0.1638278,0.00041195747],"about_ca_topic_score_codex":0.00016425925,"about_ca_topic_score_gemma":0.00004879355,"teacher_disagreement_score":0.27531916,"about_ca_system_score_codex":0.00010020258,"about_ca_system_score_gemma":0.00023972375,"threshold_uncertainty_score":0.8690164},"labels":[],"label_agreement":null},{"id":"W2750876524","doi":"10.1016/j.humpath.2017.08.036","title":"Characterization of genome-wide copy number aberrations in colonic mixed adenoneuroendocrine carcinoma and neuroendocrine carcinoma reveals recurrent amplification of PTGER4 and MYC genes","year":2017,"lang":"en","type":"article","venue":"Human Pathology","topic":"Neuroendocrine Tumor Research Advances","field":"Medicine","cited_by":21,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University","funders":"","keywords":"Adenocarcinoma; Cancer research; Copy-number variation; Carcinoma; Biology; Gene duplication; Comparative genomic hybridization; Gene; Genome; Cancer; Genetics","score_opus":0.039466053583234836,"score_gpt":0.3339203444901513,"score_spread":0.29445429090691644,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2750876524","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99702764,0.00036280032,0.000015024555,0.001295205,0.000109581175,0.00090847793,0.00006549355,0.000019758845,0.00019604308],"genre_scores_gemma":[0.99831074,0.00076852896,0.00018886248,0.00006608909,0.00006229376,0.00010009153,0.00012879065,0.000036359208,0.00033825572],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99791926,0.00024465512,0.0006881034,0.00053537305,0.00022081078,0.00039178922],"domain_scores_gemma":[0.99821985,0.00011284838,0.0005507811,0.00075640937,0.0002142828,0.00014580254],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012030746,0.00022333328,0.0006400817,0.0002909799,0.0001910723,0.000025346772,0.00019845559,0.000015347114,0.00005639575],"category_scores_gemma":[0.00038440776,0.00022810197,0.00005014376,0.00011922525,0.0005935184,0.00020163263,0.00023468594,0.00025671325,0.000004908543],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015617751,0.00012963646,0.5654564,0.00024958653,0.000006437124,0.0010638203,0.00008660498,3.858125e-7,0.43222785,0.00033895313,0.00002399433,0.00026017026],"study_design_scores_gemma":[0.0019450788,0.00078307715,0.94694644,0.000045459936,0.000046053476,0.0025400028,0.000035567577,0.00002466856,0.046987943,0.00023138044,0.000292699,0.000121620535],"about_ca_topic_score_codex":0.000063295935,"about_ca_topic_score_gemma":0.00010247814,"teacher_disagreement_score":0.3852399,"about_ca_system_score_codex":0.000033620785,"about_ca_system_score_gemma":0.00005801228,"threshold_uncertainty_score":0.9301728},"labels":[],"label_agreement":null},{"id":"W2752243987","doi":"10.1016/j.humpath.2017.08.025","title":"Primary cutaneous NK/T-cell lymphoma of nasal type: an age-related lymphoproliferative disease?","year":2017,"lang":"en","type":"article","venue":"Human Pathology","topic":"Lymphoma Diagnosis and Treatment","field":"Medicine","cited_by":9,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"BC Cancer Agency","funders":"","keywords":"Lymphoma; Medicine; Stage (stratigraphy); T-cell lymphoma; Pathology; Nose; Dermatology; Internal medicine; Gastroenterology; Surgery; Biology","score_opus":0.024719749783454172,"score_gpt":0.29803211305561816,"score_spread":0.273312363272164,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2752243987","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.977988,0.0006321805,0.0000016055507,0.0001818855,0.00024924384,0.00040052802,0.000034579032,0.0000652292,0.020446768],"genre_scores_gemma":[0.99625796,0.00011385011,0.00020170287,0.00038337655,0.00011482573,0.000039647854,0.00026156698,0.000038526858,0.0025885624],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99857146,0.000099212855,0.00035531516,0.0004581087,0.00020313455,0.00031274825],"domain_scores_gemma":[0.9981782,0.00003884293,0.0002876239,0.0010902769,0.00013165583,0.0002733936],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000094922325,0.00024443836,0.0005534877,0.000094596384,0.00034790015,0.00003170548,0.00022460187,0.00017443165,0.00020197434],"category_scores_gemma":[0.000062490195,0.00020284875,0.00013847218,0.000041195886,0.00050441833,0.00009214288,0.00011640312,0.000062107174,0.00012176],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0025197936,0.01475581,0.7749479,0.0005400972,0.0005303966,0.09094116,0.003491048,0.000009599574,0.07709125,0.010208915,0.0027300569,0.022234019],"study_design_scores_gemma":[0.009999532,0.002099121,0.97706306,0.00009361011,0.00041207075,0.0013275546,0.0000484697,0.000028682141,0.0065566464,0.0014599138,0.0006539895,0.0002573668],"about_ca_topic_score_codex":0.00006191851,"about_ca_topic_score_gemma":0.00001996744,"teacher_disagreement_score":0.2021152,"about_ca_system_score_codex":0.00018756777,"about_ca_system_score_gemma":0.00025426404,"threshold_uncertainty_score":0.82719314},"labels":[],"label_agreement":null},{"id":"W2752339562","doi":"10.1016/j.humpath.2017.08.030","title":"Diagnostic value of histone 3 mutations in osteoclast-rich bone tumors","year":2017,"lang":"en","type":"article","venue":"Human Pathology","topic":"Bone Tumor Diagnosis and Treatments","field":"Medicine","cited_by":27,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Calgary Laboratory Services; University of Calgary","funders":"Calgary Laboratory Services","keywords":"Chondroblastoma; Aneurysmal bone cyst; Pathology; Medicine; Giant-cell tumor of bone; Biology; Giant cell","score_opus":0.027586216268508944,"score_gpt":0.3518402124594221,"score_spread":0.32425399619091316,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2752339562","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9932223,0.00043653694,0.0000031257002,0.00049975095,0.0001102853,0.00031620087,0.000014950411,0.000020530395,0.005376341],"genre_scores_gemma":[0.99849164,0.000025528258,0.00025470962,0.00008096059,0.000042319472,0.00010023411,0.0000470304,0.000020531696,0.00093705533],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9990166,0.000055897,0.00034050184,0.00025012068,0.00011540674,0.0002214982],"domain_scores_gemma":[0.9988975,0.00017169263,0.00023333819,0.000573283,0.000053171578,0.00007100925],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001421412,0.00012836454,0.00044717357,0.00017109404,0.00015978738,0.000007896346,0.000102178084,0.000071727685,0.00015483475],"category_scores_gemma":[0.00060633075,0.000119164855,0.00006785746,0.000049941857,0.00030861422,0.000055397555,0.00006348201,0.00014068244,0.00007880319],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00002656471,0.0010576372,0.98091155,0.0000635753,0.000024000461,0.007700609,0.00061973755,0.0000064952937,0.0043650786,0.0036591666,0.00023899303,0.0013265822],"study_design_scores_gemma":[0.0025941278,0.0005044946,0.99228764,0.00013963565,0.000104642815,0.00036816075,0.00005872923,0.0000061659825,0.0027057037,0.0010963031,0.000046909456,0.000087510474],"about_ca_topic_score_codex":0.00021374204,"about_ca_topic_score_gemma":0.00027255283,"teacher_disagreement_score":0.011376057,"about_ca_system_score_codex":0.00007077153,"about_ca_system_score_gemma":0.00004587121,"threshold_uncertainty_score":0.4859402},"labels":[],"label_agreement":null},{"id":"W2752647801","doi":"10.1016/j.humpath.2017.06.026","title":"Pulmonary interstitial glycogenosis associated with a spectrum of neonatal pulmonary disorders","year":2017,"lang":"en","type":"article","venue":"Human Pathology","topic":"Congenital Diaphragmatic Hernia Studies","field":"Medicine","cited_by":40,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"SickKids Foundation; Hospital for Sick Children; University of Toronto","funders":"","keywords":"Pathology; Tachypnea; Medicine; Lung; Periodic acid–Schiff stain; Pulmonary hypertension; Lung biopsy; Biopsy; Internal medicine; Immunohistochemistry","score_opus":0.01948259865123252,"score_gpt":0.2746505759920768,"score_spread":0.2551679773408443,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2752647801","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.95643854,0.00026121867,0.000069053385,0.0008943223,0.00012991502,0.00033969997,0.000049005313,0.000058893093,0.041759375],"genre_scores_gemma":[0.99872714,0.000030500869,0.000087365726,0.00008025329,0.00008265834,0.00003759188,0.000054616743,0.000035261528,0.0008646029],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9987529,0.00006240239,0.0003026261,0.0003299398,0.00021156868,0.00034055155],"domain_scores_gemma":[0.99888927,0.0000755718,0.0002773324,0.00060553604,0.0000651357,0.00008718214],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015642209,0.00021026745,0.00053692213,0.00012516958,0.00031556576,0.000014238668,0.00023883478,0.00012239892,0.00039986664],"category_scores_gemma":[0.00029092992,0.00017703944,0.00012739918,0.0000540377,0.0008484364,0.00008516343,0.00023639564,0.0002183456,0.000033908862],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0011097138,0.0011852141,0.92338324,0.00026741048,0.0009117664,0.012505083,0.0025869403,0.0000012590145,0.021627735,0.00092839415,0.0002769235,0.035216343],"study_design_scores_gemma":[0.0015174531,0.0011606123,0.9924202,0.000215314,0.0003191302,0.000985132,0.000536319,0.000061812105,0.000541885,0.001689515,0.00029940117,0.00025323388],"about_ca_topic_score_codex":0.00010583403,"about_ca_topic_score_gemma":0.000887005,"teacher_disagreement_score":0.069036976,"about_ca_system_score_codex":0.000047957317,"about_ca_system_score_gemma":0.00004708499,"threshold_uncertainty_score":0.72194594},"labels":[],"label_agreement":null},{"id":"W2766494630","doi":"10.1016/j.humpath.2017.10.014","title":"Genetic profiles of different subsets of Merkel cell carcinoma show links between combined and pure MCPyV-negative tumors","year":2017,"lang":"en","type":"article","venue":"Human Pathology","topic":"Polyomavirus and related diseases","field":"Medicine","cited_by":66,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Nova Scotia Health Authority; Dalhousie University; Queen Elizabeth II Health Sciences Centre","funders":"","keywords":"Merkel cell polyomavirus; Merkel cell carcinoma; Biology; Copy-number variation; Carcinogenesis; Gene; Virus; Cancer research; Carcinoma; Virology; Genetics; Genome","score_opus":0.025905512677964516,"score_gpt":0.2790907554897001,"score_spread":0.25318524281173554,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2766494630","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99720466,0.0008226428,0.0000030730125,0.000108165164,0.000051190607,0.0003647742,0.00010882147,0.0000139095855,0.0013227729],"genre_scores_gemma":[0.9993963,0.00004035051,0.00007639344,0.00002344192,0.00006647041,0.000014434314,0.00003355539,0.000020224928,0.0003288241],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99899536,0.0000786311,0.00033154924,0.00025210186,0.00012937521,0.00021295315],"domain_scores_gemma":[0.9988962,0.000054319127,0.00035734582,0.0004717302,0.00007694748,0.00014349294],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000059455102,0.00017260929,0.0005966712,0.00009825725,0.0001543984,0.000006868647,0.00015298204,0.00026335812,0.000061857],"category_scores_gemma":[0.00005795103,0.00012801163,0.00009435423,0.000022021015,0.0006993816,0.000024303847,0.00012099486,0.0002594726,0.00000327835],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000097434146,0.0002518442,0.93515563,0.00030382018,0.00004855707,0.00022553599,0.00061612605,1.59234e-7,0.06252067,0.00020373531,0.00009744738,0.00047901407],"study_design_scores_gemma":[0.0023570615,0.0009261416,0.9220896,0.00009399313,0.00032748308,0.000022001179,0.000085683714,0.000010287634,0.073034644,0.0009451772,0.000003473088,0.00010448419],"about_ca_topic_score_codex":0.00005450722,"about_ca_topic_score_gemma":0.0000128417805,"teacher_disagreement_score":0.01306609,"about_ca_system_score_codex":0.000010690001,"about_ca_system_score_gemma":0.000040692852,"threshold_uncertainty_score":0.5220163},"labels":[],"label_agreement":null},{"id":"W2782729749","doi":"10.1016/j.humpath.2017.12.027","title":"The evolving diagnosis of noninvasive follicular thyroid neoplasm with papillary-like nuclear features (NIFTP)","year":2018,"lang":"en","type":"editorial","venue":"Human Pathology","topic":"Thyroid Cancer Diagnosis and Treatment","field":"Medicine","cited_by":56,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University Health Network","funders":"","keywords":"Thyroid neoplasm; Medicine; Pathology; Pathological; Thyroid carcinoma; Thyroid; Radiology; Internal medicine","score_opus":0.006842307374626089,"score_gpt":0.25333836031028023,"score_spread":0.24649605293565413,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2782729749","genre_codex":"editorial","genre_gemma":"editorial","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"editorial","genre_consensus":"editorial","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.21962906,0.07129206,0.000004869489,0.0015575505,0.6892611,0.0036238849,0.00073086563,0.00035711966,0.013543518],"genre_scores_gemma":[0.1840004,0.02945992,0.0007490951,0.00065214175,0.77733374,0.001583443,0.0012390119,0.00061969546,0.0043625487],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9968119,0.00020620877,0.000565214,0.0009056561,0.0008505722,0.0006604325],"domain_scores_gemma":[0.9960849,0.0010479791,0.00066994195,0.0013388718,0.0006730508,0.00018520243],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0003203878,0.0006480391,0.0012496444,0.0001667988,0.0005698267,0.00006846553,0.00043853486,0.0010232622,0.00019801653],"category_scores_gemma":[0.00032586485,0.00039695707,0.00039722372,0.00017374486,0.0008435888,0.00005551167,0.0002085461,0.0009204253,0.00007430143],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002605575,0.0003106134,0.0019106376,0.00019381863,0.00077296136,0.0019719969,0.00082495104,8.262604e-7,0.00017270827,0.00025305146,0.99279475,0.0005331286],"study_design_scores_gemma":[0.0039878525,0.0072363294,0.010467933,0.00093135773,0.0017091413,0.00029936546,0.00027429085,4.4477434e-7,0.00085507147,0.00016079025,0.973585,0.00049240596],"about_ca_topic_score_codex":0.00018490505,"about_ca_topic_score_gemma":0.0008642293,"teacher_disagreement_score":0.088072665,"about_ca_system_score_codex":0.00027515495,"about_ca_system_score_gemma":0.00038697777,"threshold_uncertainty_score":0.99984825},"labels":[],"label_agreement":null},{"id":"W2787515739","doi":"10.1016/j.humpath.2018.01.025","title":"Autocrine activation of platelet-derived growth factor receptor α in metastatic papillary thyroid cancer","year":2018,"lang":"en","type":"article","venue":"Human Pathology","topic":"Thyroid Cancer Diagnosis and Treatment","field":"Medicine","cited_by":9,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"Canadian Institutes of Health Research; University of Alberta","keywords":"Papillary thyroid cancer; Autocrine signalling; Medicine; Cancer research; Receptor; Thyroid cancer; Internal medicine; Cancer; Oncology; Endocrinology; Pathology","score_opus":0.03745350113914098,"score_gpt":0.32439204640976094,"score_spread":0.28693854527061996,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2787515739","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99760723,0.0005309203,0.000030793984,0.00078665826,0.0001381207,0.00041871532,0.00003590449,0.000035627785,0.00041604313],"genre_scores_gemma":[0.9983059,0.00037923438,0.0003793134,0.00043255163,0.00015139165,0.00016589972,0.000055012722,0.000024514351,0.00010616076],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9989612,0.000074286894,0.0003184398,0.00028126306,0.0001286353,0.00023615533],"domain_scores_gemma":[0.9994058,0.000046191682,0.00014951744,0.0002209197,0.00011523822,0.00006235588],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00007161771,0.00015534037,0.000419621,0.000166529,0.000045534984,0.0000036956858,0.00006184969,0.00006556858,0.0012293252],"category_scores_gemma":[0.000040922012,0.00012793533,0.0000617363,0.00015011875,0.00016007811,0.000058716138,0.00003350005,0.00011548909,0.000031082123],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003395089,0.00071000826,0.066651784,0.00015431532,0.0001572382,0.00015823812,0.0022504071,0.0000016306095,0.9207428,0.0010454189,0.00224075,0.005547901],"study_design_scores_gemma":[0.0035874688,0.0020171637,0.52964693,0.00013598324,0.000057549307,0.000028510538,0.00010204854,0.000006542611,0.46286452,0.0004685918,0.00094668067,0.00013802119],"about_ca_topic_score_codex":0.00033683918,"about_ca_topic_score_gemma":0.00017975127,"teacher_disagreement_score":0.46299514,"about_ca_system_score_codex":0.00016310184,"about_ca_system_score_gemma":0.00007595049,"threshold_uncertainty_score":0.9996837},"labels":[],"label_agreement":null},{"id":"W2788351363","doi":"10.1016/j.humpath.2018.02.014","title":"Familial PDGFRA -mutation syndrome: somatic and gastrointestinal phenotype","year":2018,"lang":"en","type":"article","venue":"Human Pathology","topic":"Gastrointestinal Tumor Research and Treatment","field":"Medicine","cited_by":30,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Mount Sinai Hospital; Royal Columbian Hospital; Kingston General Hospital; Queen's University","funders":"","keywords":"PDGFRA; Germline mutation; Germline; GiST; Mutation; Biology; Gastrointestinal tract; Stromal tumor; Phenotype; Somatic cell; Pathology; Cancer research; Medicine; Stromal cell; Genetics; Internal medicine","score_opus":0.027305519501924048,"score_gpt":0.31571679289412424,"score_spread":0.2884112733922002,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2788351363","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9961643,0.00004374726,0.00060672965,0.000326163,0.000034781344,0.0002718544,0.0000040832088,0.00007118809,0.0024771218],"genre_scores_gemma":[0.98984605,0.0000012639399,0.009365281,0.000116050665,0.00012632406,0.00002192102,0.00003345285,0.000017591601,0.0004720398],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9989839,0.00006446986,0.00018277562,0.00027059417,0.00015637602,0.00034187495],"domain_scores_gemma":[0.99942946,0.00004323605,0.000052679992,0.00019509137,0.00009611004,0.0001834474],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013793816,0.00013414946,0.00022365437,0.00011912469,0.00014931407,0.00001484501,0.00004744787,0.00002458986,0.000296311],"category_scores_gemma":[0.00016639954,0.00011236045,0.00003597071,0.000076958364,0.000425352,0.000040439347,0.00005194784,0.00015168895,0.00034193203],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0009839851,0.001315169,0.7410712,0.00047607764,0.000100503756,0.07337081,0.0010779016,7.9887025e-7,0.16425025,0.008169735,0.0012188416,0.007964695],"study_design_scores_gemma":[0.001966375,0.010692461,0.8799815,0.00016507879,0.000062163366,0.10285169,0.00011201967,0.000120679535,0.0005038874,0.0034249653,0.00002807575,0.00009106245],"about_ca_topic_score_codex":0.000021580005,"about_ca_topic_score_gemma":0.000021523017,"teacher_disagreement_score":0.16374636,"about_ca_system_score_codex":0.000045081324,"about_ca_system_score_gemma":0.000048922793,"threshold_uncertainty_score":0.45819265},"labels":[],"label_agreement":null},{"id":"W2796349501","doi":"10.1016/j.humpath.2017.12.030","title":"Transcriptome analyses reveal FOXA1 dysregulation in mammary and extramammary Paget's disease","year":2018,"lang":"en","type":"review","venue":"Human Pathology","topic":"Cancer and Skin Lesions","field":"Medicine","cited_by":25,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"FOXA1; GATA3; Transcriptome; Extramammary Paget's disease; Estrogen receptor; Biology; Immunohistochemistry; Androgen receptor; Meibomian gland; Cancer research; Pathology; Internal medicine; Medicine; Disease; Gene; Gene expression; Breast cancer; Cancer; Transcription factor; Genetics; Prostate cancer","score_opus":0.1591913729526319,"score_gpt":0.44194095665949606,"score_spread":0.2827495837068642,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2796349501","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0017337288,0.995727,0.000102016566,0.000093921495,0.0001825403,0.0007491933,0.00005723916,0.000057228193,0.0012971017],"genre_scores_gemma":[0.002760613,0.99339896,0.0002340791,0.00018829027,0.00051256234,0.00014705438,0.00070198096,0.000056024626,0.0020004197],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99787927,0.00032169238,0.00066361105,0.00065450347,0.00015840055,0.0003225098],"domain_scores_gemma":[0.9988821,0.00007876927,0.00016082377,0.0006032349,0.000040737683,0.00023430781],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00027463565,0.00036684208,0.0015741524,0.0006115034,0.00009332129,0.000020593681,0.00013513363,0.00037321215,0.00023586758],"category_scores_gemma":[0.000048796905,0.00030780328,0.00036239758,0.0002710145,0.00025899318,0.00007753657,0.00006452543,0.00041628565,0.000020494566],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013964671,0.00039920933,0.0010728922,0.029850256,0.00022953861,0.012662127,0.00057214155,2.164282e-7,0.0001696674,0.001877359,0.006585896,0.94644105],"study_design_scores_gemma":[0.0014717164,0.0003618,0.05894563,0.0113308225,0.0030927977,0.0019317514,0.000016089018,0.000005479908,6.183151e-7,0.0017467894,0.92046994,0.0006265566],"about_ca_topic_score_codex":0.000012623482,"about_ca_topic_score_gemma":0.000043275413,"teacher_disagreement_score":0.9458145,"about_ca_system_score_codex":0.0001124945,"about_ca_system_score_gemma":0.00022187333,"threshold_uncertainty_score":0.9999374},"labels":[],"label_agreement":null},{"id":"W2801562008","doi":"10.1016/j.humpath.2018.04.004","title":"SWI/SNF protein expression status in fumarate hydratase–deficient renal cell carcinoma: immunohistochemical analysis of 32 tumors from 28 patients","year":2018,"lang":"en","type":"article","venue":"Human Pathology","topic":"Chromatin Remodeling and Cancer","field":"Biochemistry, Genetics and Molecular Biology","cited_by":26,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary; Calgary Laboratory Services","funders":"","keywords":"SMARCB1; SMARCA4; ARID1A; SWI/SNF; Cancer research; Clear cell; Renal cell carcinoma; Medicine; Papillary renal cell carcinomas; Pathology; Biology; Chromatin remodeling; Mutation; Chromatin; Genetics; Gene","score_opus":0.008453505505629353,"score_gpt":0.24833741586772037,"score_spread":0.23988391036209103,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2801562008","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.998289,0.0005149123,0.000223956,0.0000037052732,0.000056527337,0.00017881718,0.00022835303,0.000007687601,0.00049707486],"genre_scores_gemma":[0.99738085,0.000005710464,0.00041924752,0.000040328145,0.00007398066,0.000036697515,0.0019206831,0.000018234221,0.00010425775],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9984128,0.00013661032,0.00045478714,0.00052358635,0.00014902765,0.0003231754],"domain_scores_gemma":[0.9990462,0.0000072535936,0.00022775984,0.00053572067,0.00011756887,0.00006549995],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013019973,0.00018115056,0.00033422493,0.00015043936,0.000072143324,0.000007478028,0.00019828537,0.00019569244,0.00011159489],"category_scores_gemma":[0.000030197498,0.00017274666,0.00012894785,0.0001916595,0.0002120705,0.0000033672127,0.00016610498,0.00012352435,0.000007864558],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013819765,0.00021835256,0.012455234,0.000011624371,0.000022803271,0.000008528195,0.00027050977,0.00010474342,0.9863163,0.0000032180108,0.00030700304,0.00014345553],"study_design_scores_gemma":[0.0011772589,0.0005021436,0.04310031,0.000025510659,0.000082075356,7.794162e-7,0.000053357206,0.00034135496,0.95425224,0.00004775009,0.00021049914,0.00020673983],"about_ca_topic_score_codex":0.00027523513,"about_ca_topic_score_gemma":0.000114712675,"teacher_disagreement_score":0.03206411,"about_ca_system_score_codex":0.000051798397,"about_ca_system_score_gemma":0.000060542498,"threshold_uncertainty_score":0.7044405},"labels":[],"label_agreement":null},{"id":"W2811228051","doi":"10.1016/j.humpath.2018.06.031","title":"IgA-dominant glomerulonephritis with a membranoproliferative pattern of injury","year":2018,"lang":"en","type":"article","venue":"Human Pathology","topic":"Renal Diseases and Glomerulopathies","field":"Medicine","cited_by":18,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"St. Paul's Hospital; University of British Columbia","funders":"","keywords":"Medicine; Membranoproliferative glomerulonephritis; Gastroenterology; Nephropathy; Glomerulonephritis; Kidney disease; Proteinuria; Internal medicine; Nephrotic syndrome; Renal biopsy; Serology; Pathology; Biopsy; Immunology; Kidney; Antibody; Diabetes mellitus","score_opus":0.011656770357598833,"score_gpt":0.2866690608662444,"score_spread":0.27501229050864556,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2811228051","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99573964,0.00044969292,0.000277355,0.00022306213,0.00007102048,0.0002921112,0.00005750084,0.00003065336,0.002858974],"genre_scores_gemma":[0.99833775,0.00006913046,0.00017048836,0.00067062513,0.00025126158,0.00004024189,0.000021273552,0.000025577754,0.00041367472],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9988621,0.00007456392,0.0002948721,0.00030283508,0.00019058268,0.0002750665],"domain_scores_gemma":[0.9991452,0.000016981025,0.00013200745,0.00034374988,0.000236977,0.0001250868],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000112191614,0.00017371238,0.00047732808,0.00014634851,0.00010154618,0.000007022743,0.00007347625,0.000089506124,0.00038023293],"category_scores_gemma":[0.000027426073,0.00012382749,0.00008946096,0.0001502066,0.00063225866,0.000052507214,0.000050915824,0.00012870507,0.00006836083],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0039595747,0.0013108954,0.24128145,0.0012756138,0.00036880304,0.0037391626,0.0072767665,4.4202577e-7,0.69774747,0.0032581696,0.0037162162,0.036065433],"study_design_scores_gemma":[0.006840864,0.020866346,0.70980006,0.0010199555,0.0004926122,0.0022524605,0.0011939552,0.000027285929,0.2525903,0.001398884,0.0029190097,0.0005982724],"about_ca_topic_score_codex":0.000053603693,"about_ca_topic_score_gemma":0.00008236634,"teacher_disagreement_score":0.4685186,"about_ca_system_score_codex":0.00001662807,"about_ca_system_score_gemma":0.00006285888,"threshold_uncertainty_score":0.5049538},"labels":[],"label_agreement":null},{"id":"W2832366557","doi":"10.1016/j.humpath.2018.04.035","title":"Telocytes as possible precursors of PDGFRA-mutant gastrointestinal mesenchymal tumors—reply","year":2018,"lang":"en","type":"letter","venue":"Human Pathology","topic":"Gastrointestinal Tumor Research and Treatment","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Mount Sinai Hospital; Kingston Health Sciences Centre; Queen's University","funders":"","keywords":"PDGFRA; Mesenchymal stem cell; Mutant; Cancer research; Pathology; Biology; Medicine; GiST; Genetics; Stromal cell; Gene","score_opus":0.032828261231974964,"score_gpt":0.31991647154164865,"score_spread":0.2870882103096737,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2832366557","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.84926134,0.00039961992,0.00006447798,0.11611343,0.00023709689,0.0021445898,0.00023770658,0.00030498367,0.031236747],"genre_scores_gemma":[0.73023194,0.000035858237,0.021047777,0.19572918,0.010370534,0.000527953,0.0031394071,0.00061325886,0.038304087],"study_design_codex":"not_applicable","study_design_gemma":"case_report","domain_scores_codex":[0.9953081,0.0003325092,0.0009423977,0.0010994826,0.0009120612,0.0014054646],"domain_scores_gemma":[0.9970006,0.00025763802,0.00058899727,0.0011573988,0.0006545484,0.00034082454],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00042357243,0.00074175076,0.0014569456,0.0006818253,0.0001804117,0.00003441908,0.00047298716,0.00027615688,0.0022590528],"category_scores_gemma":[0.0008936197,0.0006100254,0.00042344566,0.00025804373,0.0014576041,0.000060271297,0.00028408418,0.0022677702,0.00082965347],"study_design_candidate":"case_report","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0008696748,0.0009271874,0.060471546,0.0014688616,0.0002655492,0.21918887,0.00025964694,4.2279592e-7,0.022462307,0.00036573096,0.6934514,0.0002687724],"study_design_scores_gemma":[0.010578908,0.10882652,0.10153762,0.0098589035,0.0015807502,0.6442171,0.00037556828,0.000024344365,0.05097976,0.010735555,0.0592605,0.0020244704],"about_ca_topic_score_codex":0.00021396586,"about_ca_topic_score_gemma":0.000017679491,"teacher_disagreement_score":0.6341909,"about_ca_system_score_codex":0.00022954032,"about_ca_system_score_gemma":0.00067271566,"threshold_uncertainty_score":0.9999483},"labels":[],"label_agreement":null},{"id":"W2882985182","doi":"10.1016/j.humpath.2018.07.021","title":"Histopathologic findings in lung biopsies from patients with primary biliary cholangitis","year":2018,"lang":"en","type":"article","venue":"Human Pathology","topic":"Liver Diseases and Immunity","field":"Medicine","cited_by":10,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"Pathology; Medicine; Histopathology; Lung; Biopsy; Lung biopsy; Fibrosis; Autoimmune hepatitis; Diffuse alveolar damage; Internal medicine; Disease","score_opus":0.012587096332129854,"score_gpt":0.24369022778993527,"score_spread":0.23110313145780542,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2882985182","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.995442,0.0003192463,0.000009266777,0.000072955896,0.00014110576,0.00028284808,0.00006498781,0.00006899968,0.0035986088],"genre_scores_gemma":[0.99765354,0.000015494175,0.00038097939,0.0010482164,0.00011873153,0.000020313792,0.0004453076,0.000021670354,0.00029574975],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99894303,0.00009603179,0.00021212648,0.00033756724,0.00013126455,0.00027998415],"domain_scores_gemma":[0.99933124,0.000033840857,0.0000628142,0.00040285595,0.0000897212,0.00007955376],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000105841544,0.00015901035,0.0003181013,0.00017235645,0.0001239699,0.000010624608,0.00012284495,0.0001234704,0.0006131367],"category_scores_gemma":[0.000043459277,0.00012357662,0.000050536575,0.00013609594,0.00041525147,0.00010502973,0.00010948319,0.00022454883,0.00008699164],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00021440569,0.00036978588,0.9919909,0.000032486703,0.00001235745,0.0004328516,0.0009761262,4.2035808e-8,0.004818645,0.000043986445,0.00072352594,0.00038487188],"study_design_scores_gemma":[0.002503817,0.00096178567,0.995369,0.00007909989,0.00007187506,0.000029700328,0.000074910655,0.0000024854112,0.0002205263,0.00022840501,0.00031068415,0.00014767314],"about_ca_topic_score_codex":0.00015044711,"about_ca_topic_score_gemma":0.000034547513,"teacher_disagreement_score":0.0045981184,"about_ca_system_score_codex":0.00013417278,"about_ca_system_score_gemma":0.00004207231,"threshold_uncertainty_score":0.67134166},"labels":[],"label_agreement":null},{"id":"W2884146571","doi":"10.1016/j.humpath.2018.07.014","title":"Histologic features of autoimmune hepatitis: a critical appraisal","year":2018,"lang":"en","type":"article","venue":"Human Pathology","topic":"Liver Diseases and Immunity","field":"Medicine","cited_by":64,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Royal Columbian Hospital","funders":"","keywords":"Emperipolesis; Pathology; Autoimmune hepatitis; Medicine; Plasma cell; Hepatitis; Fibrosis; Kupffer cell; Liver disease; Hepatology; Immunology; Disease; Internal medicine","score_opus":0.027500809799376438,"score_gpt":0.3521224138593805,"score_spread":0.32462160406000407,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2884146571","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98467404,0.0011806973,0.00009719857,0.00037529232,0.00044264257,0.000091420196,0.000013383164,0.00006470787,0.0130606275],"genre_scores_gemma":[0.99815124,0.000021564048,0.0006316556,0.00038661322,0.00018544302,0.00000956501,0.000029052931,0.000011341938,0.0005735284],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99920726,0.00010909095,0.00020455332,0.00017430526,0.00009715828,0.00020761808],"domain_scores_gemma":[0.9992399,0.000118382166,0.000051363637,0.00036811968,0.00015440969,0.00006778562],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00010540351,0.000098715034,0.00030419984,0.00007469355,0.000111230496,0.000003803551,0.00010481225,0.000116714626,0.0011667596],"category_scores_gemma":[0.0005095604,0.000083099876,0.00009482592,0.00006367452,0.0010415912,0.000033238048,0.00008347025,0.00017075143,0.0000705168],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00094545475,0.0030280468,0.44774485,0.00067041925,0.00020700299,0.0020676428,0.0053854687,1.0372387e-7,0.27368006,0.21774222,0.04056207,0.007966648],"study_design_scores_gemma":[0.00067312474,0.0017911831,0.9924179,0.000037934293,0.00011376154,0.00043864077,0.000099446865,0.0000052824644,0.0011553133,0.0010003499,0.002183135,0.00008394444],"about_ca_topic_score_codex":0.00012760324,"about_ca_topic_score_gemma":0.000012809747,"teacher_disagreement_score":0.544673,"about_ca_system_score_codex":0.000020718333,"about_ca_system_score_gemma":0.000044899716,"threshold_uncertainty_score":0.9997463},"labels":[],"label_agreement":null},{"id":"W2885477240","doi":"10.1016/j.humpath.2018.07.022","title":"Immunohistochemical profiles of different subsets of Merkel cell carcinoma","year":2018,"lang":"en","type":"article","venue":"Human Pathology","topic":"Polyomavirus and related diseases","field":"Medicine","cited_by":67,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Capital District Health Authority; Dalhousie University; Nova Scotia Health Authority","funders":"","keywords":"Merkel cell polyomavirus; Merkel cell carcinoma; Immunohistochemistry; Chromogranin A; Pathology; Immunophenotyping; Biology; Merkel cell; Carcinoma; Medicine; Immunology; Flow cytometry","score_opus":0.016714088283478465,"score_gpt":0.2820619342588348,"score_spread":0.2653478459753563,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2885477240","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9896475,0.0014349739,0.0000048127363,0.000024959196,0.00009337815,0.00015048894,0.000022726637,0.000016854821,0.008604312],"genre_scores_gemma":[0.9990923,0.0000118082335,0.000060129838,0.000033791257,0.000080099475,0.0000085868705,0.00003616267,0.00001386509,0.00066326256],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9992343,0.000038888327,0.0002877992,0.0001643596,0.00010511292,0.00016950266],"domain_scores_gemma":[0.99939454,0.000018928216,0.00012901469,0.00029713425,0.00008674002,0.000073636256],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000041625284,0.00010611069,0.0003388746,0.00008354408,0.000036081226,7.2633446e-7,0.00008372191,0.00014148449,0.00041238195],"category_scores_gemma":[0.000019458173,0.00007846231,0.00011035802,0.0000470231,0.0006023116,0.000010012521,0.000050501647,0.00010521465,0.000022148795],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015254061,0.0004832278,0.046471138,0.00012808347,0.000017075794,0.000058370933,0.0003407877,1.3013935e-8,0.95097244,0.00047868947,0.0007692151,0.00012843414],"study_design_scores_gemma":[0.0011525397,0.00076971547,0.3143227,0.000037977963,0.00014091139,0.000050930354,0.000043680782,0.00000447778,0.6831156,0.00022060538,0.00007280006,0.00006806945],"about_ca_topic_score_codex":0.000020842592,"about_ca_topic_score_gemma":0.0000014308946,"teacher_disagreement_score":0.26785684,"about_ca_system_score_codex":0.00001676984,"about_ca_system_score_gemma":0.00003680104,"threshold_uncertainty_score":0.4515293},"labels":[],"label_agreement":null},{"id":"W2885581930","doi":"10.1016/j.humpath.2018.07.024","title":"Reproducibility of PD-L1 immunohistochemistry interpretation across various types of genitourinary and head/neck carcinomas, antibody clones, and tissue types","year":2018,"lang":"en","type":"article","venue":"Human Pathology","topic":"Cancer Immunotherapy and Biomarkers","field":"Medicine","cited_by":46,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Health Sciences Centre; University of Toronto; Sunnybrook Health Science Centre","funders":"AstraZeneca","keywords":"Concordance; Tissue microarray; Immunohistochemistry; Head and neck squamous-cell carcinoma; Genitourinary system; Medicine; Pathology; PD-L1; Carcinoma; Antibody; Head and neck; Immunotherapy; Oncology; Head and neck cancer; Internal medicine; Cancer; Immunology","score_opus":0.01831126202199016,"score_gpt":0.3563426486502356,"score_spread":0.33803138662824544,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2885581930","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9909962,0.008041492,0.000028946139,0.00006254296,0.00011249598,0.0001817236,0.000021503438,0.000016017004,0.0005390801],"genre_scores_gemma":[0.9990218,0.00013016119,0.0003339133,0.000048068225,0.00009331913,0.000004512228,0.000037118305,0.000011744974,0.0003193268],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99895525,0.000052402844,0.00031364735,0.00047630124,0.000068168774,0.00013423811],"domain_scores_gemma":[0.9989956,0.000024515502,0.00015397069,0.00066846784,0.00012776363,0.000029658151],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00045744688,0.00010740587,0.00032864622,0.00003901434,0.00007018842,0.000003958206,0.000056068628,0.00011975355,0.00006560338],"category_scores_gemma":[0.000079605576,0.00009834035,0.000034956276,0.000064337735,0.0008714792,0.000031370797,0.00006921128,0.00009170721,0.0000012429333],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0017411454,0.00009837863,0.07508639,0.00033401288,0.000052714648,0.000032606924,0.0032017059,4.584273e-8,0.913591,0.000014144527,0.00005526973,0.0057925675],"study_design_scores_gemma":[0.0011283712,0.0016753128,0.79211706,0.00009631599,0.0000654136,0.0005779967,0.00016092707,0.000007950505,0.20360638,0.00014824979,0.0003219379,0.00009408954],"about_ca_topic_score_codex":0.00028945354,"about_ca_topic_score_gemma":0.0000338152,"teacher_disagreement_score":0.71703064,"about_ca_system_score_codex":0.000024781053,"about_ca_system_score_gemma":0.00003620008,"threshold_uncertainty_score":0.40102032},"labels":[],"label_agreement":null},{"id":"W2889754041","doi":"10.1016/j.humpath.2018.08.028","title":"Histopathologic tumor regression grading in patients with gastric carcinoma submitted to neoadjuvant treatment: results of a Delphi survey","year":2018,"lang":"en","type":"article","venue":"Human Pathology","topic":"Gastric Cancer Management and Outcomes","field":"Medicine","cited_by":30,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Mount Sinai Hospital","funders":"Karolinska Institutet","keywords":"Grading (engineering); Medicine; Lymph node; Radiology; Likert scale; Neoadjuvant therapy; Regression analysis; Delphi method; Regression; Carcinoma; Oncology; Pathology; Internal medicine; Cancer; Statistics; Artificial intelligence; Computer science; Machine learning","score_opus":0.03915951685880506,"score_gpt":0.2893020427960068,"score_spread":0.25014252593720177,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2889754041","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9980441,0.000045613386,0.000031799533,0.00009063457,0.00013605038,0.0006853348,0.000036589485,0.000037603317,0.00089232036],"genre_scores_gemma":[0.9984757,0.0000030130188,0.0005137608,0.00019118372,0.000064241874,0.000030459718,0.00017403909,0.00002339637,0.00052421866],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9982601,0.00018080018,0.00047578194,0.00048240897,0.00020422794,0.0003966797],"domain_scores_gemma":[0.9989631,0.000055389417,0.00023715368,0.00046478803,0.00016986301,0.00010966977],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00036243408,0.0002313079,0.0005859967,0.00064175914,0.00007488392,0.000005627321,0.00012175499,0.000065312575,0.00003863442],"category_scores_gemma":[0.00015585823,0.00015948461,0.000055795805,0.00060241175,0.00015707825,0.000040592666,0.00007504602,0.0001034443,0.000017476741],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.002496804,0.00032223642,0.9919814,0.00001954391,0.000009721478,0.00054801087,0.0008366822,0.0000010829259,0.00044127158,0.000018097851,0.000601973,0.0027232035],"study_design_scores_gemma":[0.009850406,0.008433613,0.98093706,0.0000864102,0.000058310456,0.00003266272,0.00006094982,0.000006551622,0.00018800466,0.00001506954,0.00020003936,0.00013094278],"about_ca_topic_score_codex":0.00047801557,"about_ca_topic_score_gemma":0.0010257697,"teacher_disagreement_score":0.011044333,"about_ca_system_score_codex":0.0002631123,"about_ca_system_score_gemma":0.000040489358,"threshold_uncertainty_score":0.65035933},"labels":[],"label_agreement":null},{"id":"W2895912900","doi":"10.1016/j.humpath.2018.08.036","title":"Telocytes as possible precursors of PDGFRA-mutant gastrointestinal mesenchymal tumors—reply to rejoinder","year":2018,"lang":"en","type":"letter","venue":"Human Pathology","topic":"Neuroendocrine Tumor Research Advances","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Mount Sinai Hospital; Kingston Health Sciences Centre; Queen's University","funders":"","keywords":"PDGFRA; Mesenchymal stem cell; Mutant; Cancer research; Mesenchymal Tumor; Pathology; Medicine; Biology; GiST; Immunohistochemistry; Genetics; Stromal cell","score_opus":0.03362208971838783,"score_gpt":0.342149998850191,"score_spread":0.30852790913180317,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2895912900","genre_codex":"empirical","genre_gemma":"commentary","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"commentary","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.68428844,0.00026823697,0.0000496954,0.2896692,0.00045687545,0.0027245558,0.00015450317,0.00033717087,0.022051318],"genre_scores_gemma":[0.18741307,0.000032234533,0.0126015125,0.7270302,0.010000372,0.0005265981,0.00067001383,0.00064202584,0.06108397],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9945491,0.00041721,0.0010151545,0.0013720837,0.0010865527,0.0015599106],"domain_scores_gemma":[0.99666876,0.00030470878,0.00050062616,0.0014797028,0.00067134976,0.00037484858],"candidate_categories":["metaepi_narrow","research_integrity","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.000342501,0.0007036023,0.0015032365,0.0010447016,0.00015690042,0.000034066903,0.00071359926,0.00010274816,0.0020918197],"category_scores_gemma":[0.001810063,0.0006243242,0.00029267598,0.00041358656,0.0011404323,0.00009607823,0.00051813904,0.0026548926,0.00089815486],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00044390332,0.00018873144,0.0054555642,0.00078051066,0.00005622682,0.17028609,0.000168909,9.734463e-7,0.03991762,0.00011299867,0.7824786,0.00010989905],"study_design_scores_gemma":[0.0039800988,0.038300883,0.016520154,0.0034663067,0.00038014376,0.38258827,0.0002763155,0.0000049843743,0.09937602,0.005551185,0.44797564,0.0015800166],"about_ca_topic_score_codex":0.00011243423,"about_ca_topic_score_gemma":0.000027504964,"teacher_disagreement_score":0.4968754,"about_ca_system_score_codex":0.00015996018,"about_ca_system_score_gemma":0.0005182634,"threshold_uncertainty_score":0.9998798},"labels":[],"label_agreement":null},{"id":"W2900789716","doi":"10.1016/j.humpath.2018.11.016","title":"Evolving concepts in prostatic neuroendocrine manifestations: from focal divergent differentiation to amphicrine carcinoma","year":2018,"lang":"en","type":"review","venue":"Human Pathology","topic":"Prostate Cancer Treatment and Research","field":"Medicine","cited_by":33,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Princess Margaret Cancer Centre; University Health Network; University of Toronto","funders":"","keywords":"Neuroendocrine differentiation; Medicine; Neuroendocrine carcinoma; Pathology; Neuroendocrine tumors; Prostate; Anatomical pathology; Prostatic Diseases; Carcinoma; Immunohistochemistry; Prostate cancer; Internal medicine; Cancer","score_opus":0.09669286927456215,"score_gpt":0.4207485857405662,"score_spread":0.32405571646600406,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2900789716","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.085622154,0.91012275,0.00003330118,0.00015423537,0.00043179045,0.0030453189,0.0002568665,0.000063118125,0.00027046047],"genre_scores_gemma":[0.041423403,0.9499934,0.00023611428,0.00013469713,0.0005159613,0.0011558775,0.0043638223,0.00010835795,0.0020683876],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99720216,0.00038270166,0.00074466685,0.0008079739,0.0002989692,0.00056352495],"domain_scores_gemma":[0.9987627,0.00014835745,0.00020398616,0.0005242859,0.00014255448,0.00021808103],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00011425634,0.00043377574,0.0013782282,0.00058174727,0.00012984884,0.00002962433,0.00019682497,0.00012320041,0.00069346395],"category_scores_gemma":[0.00015035126,0.00034296984,0.00021678214,0.00031577135,0.00015599595,0.000059946247,0.00024836822,0.00046078642,0.00030984668],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00072572497,0.0034250198,0.08646525,0.05174774,0.0010931591,0.083162114,0.007178302,0.0000015665814,0.0006181226,0.0011158697,0.017960876,0.7465063],"study_design_scores_gemma":[0.012944753,0.007444158,0.33369836,0.02915746,0.004229397,0.0027565623,0.0003571679,0.00007959611,0.00012261723,0.0013994528,0.6057275,0.0020829574],"about_ca_topic_score_codex":0.00014619518,"about_ca_topic_score_gemma":0.00026191273,"teacher_disagreement_score":0.7444233,"about_ca_system_score_codex":0.00048147747,"about_ca_system_score_gemma":0.00025342265,"threshold_uncertainty_score":0.99990225},"labels":[],"label_agreement":null},{"id":"W2921046872","doi":"10.1016/j.humpath.2019.03.002","title":"Fusion of ALK to the melanophilin gene MLPH in pediatric Spitz nevi","year":2019,"lang":"en","type":"article","venue":"Human Pathology","topic":"Multiple Myeloma Research and Treatments","field":"Medicine","cited_by":19,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Mount Sinai Hospital; Hospital for Sick Children; University of Toronto","funders":"","keywords":"Spitz nevus; ROS1; Anaplastic lymphoma kinase; Fusion gene; Biology; Fluorescence in situ hybridization; Exon; Cancer research; Pathology; Melanoma; Gene; Medicine; Cancer; Nevus; Genetics; Adenocarcinoma; Lung cancer","score_opus":0.02701664154590942,"score_gpt":0.32027927407223417,"score_spread":0.29326263252632473,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2921046872","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9959132,0.00038228292,0.00000568161,0.00064659386,0.000083743376,0.00068887556,0.0000075915427,0.000011653886,0.002260387],"genre_scores_gemma":[0.998256,0.00009938929,0.00022422188,0.00020925996,0.00013262023,0.0000316664,0.000032395557,0.0000124093085,0.0010020101],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9990138,0.00009736812,0.00021390666,0.0002272608,0.00018299064,0.00026466305],"domain_scores_gemma":[0.999358,0.00005394814,0.000046213925,0.00040869083,0.000045900477,0.00008722867],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00026787343,0.000092413844,0.0002507052,0.00021567386,0.000033956032,0.0000028534137,0.00012046047,0.000074845586,0.00041372515],"category_scores_gemma":[0.00007455672,0.000059098486,0.000051877654,0.0001900803,0.00003067213,0.00001650804,0.000105414736,0.00014984958,0.000601782],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00020798355,0.00028394247,0.9257012,0.0000676793,0.000013626357,0.00053322886,0.00069616316,0.00001150831,0.06846202,0.00022279195,0.0003768477,0.003422994],"study_design_scores_gemma":[0.0022214004,0.0009041272,0.993424,0.000013312801,0.00002126942,0.00006521981,0.00004692693,0.000021114623,0.002587133,0.0000967512,0.000545552,0.00005317494],"about_ca_topic_score_codex":0.00008200665,"about_ca_topic_score_gemma":0.00014503761,"teacher_disagreement_score":0.067722805,"about_ca_system_score_codex":0.000033706896,"about_ca_system_score_gemma":0.00004019499,"threshold_uncertainty_score":0.7734891},"labels":[],"label_agreement":null},{"id":"W2945756254","doi":"10.1016/j.humpath.2019.05.005","title":"CDX2 and Muc2 immunohistochemistry as prognostic markers in stage II colon cancer","year":2019,"lang":"en","type":"article","venue":"Human Pathology","topic":"Digestive system and related health","field":"Biochemistry, Genetics and Molecular Biology","cited_by":32,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Cancer Care Ontario; London Health Sciences Centre","funders":"Physicians' Services Incorporated Foundation","keywords":"CDX2; Villin; Immunohistochemistry; Colorectal cancer; Oncology; Internal medicine; Hazard ratio; Cancer; Medicine; Chemotherapy; Pathology; Biology; Confidence interval; Gene expression; Gene; Genetics","score_opus":0.006940642673343113,"score_gpt":0.2908549743050459,"score_spread":0.2839143316317028,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2945756254","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9808479,0.0032859484,0.0000016543358,0.00007147269,0.00018498399,0.0003865906,0.000015379575,0.00001198556,0.015194062],"genre_scores_gemma":[0.9857287,0.0002452811,0.000018429877,0.0002910306,0.00004955728,0.00006638493,0.00007304343,0.000020963567,0.013506626],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9989397,0.00008593427,0.00021750266,0.00040309748,0.00006137312,0.00029241],"domain_scores_gemma":[0.9995522,0.000010613202,0.00009474802,0.00024080552,0.00003765204,0.00006396884],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00020397552,0.00014567195,0.00020080715,0.000047333033,0.000092471084,0.000007086174,0.00010626652,0.00030989744,0.00015525805],"category_scores_gemma":[0.000032679727,0.00014034886,0.000033960692,0.000050522583,0.0001280879,0.0000026327057,0.0001246457,0.00016816956,0.000025548958],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008477097,0.000060195678,0.099164374,0.00012975963,0.000020146508,0.00006176605,0.00019427939,0.000008619089,0.8993972,0.00022970099,0.00043995093,0.00020926034],"study_design_scores_gemma":[0.00899833,0.006024677,0.7832465,0.00061740185,0.00008683158,0.00071446865,0.0015136467,0.000032967346,0.10600213,0.00037225138,0.09074418,0.0016466172],"about_ca_topic_score_codex":0.00012988833,"about_ca_topic_score_gemma":0.00005147219,"teacher_disagreement_score":0.79339504,"about_ca_system_score_codex":0.000036825575,"about_ca_system_score_gemma":0.00011001645,"threshold_uncertainty_score":0.572326},"labels":[],"label_agreement":null},{"id":"W2950808700","doi":"10.1016/j.humpath.2019.06.001","title":"Expression of L1 retrotransposon open reading frame protein 1 in gynecologic cancers","year":2019,"lang":"en","type":"article","venue":"Human Pathology","topic":"Chromosomal and Genetic Variations","field":"Agricultural and Biological Sciences","cited_by":20,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary; Vancouver General Hospital; BC Cancer Agency; University of British Columbia","funders":"Canadian Cancer Society","keywords":"Serous fluid; Cancer research; Biology; Immunohistochemistry; Ovarian cancer; Cancer; Comparative genomic hybridization; Pathology; Medicine; Gene; Genetics; Chromosome","score_opus":0.02649612017187502,"score_gpt":0.25989452613246045,"score_spread":0.23339840596058542,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2950808700","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9948705,0.00002482655,9.387811e-7,0.00021327614,0.000057577476,0.0005331388,0.000017216573,0.0000135658265,0.0042689797],"genre_scores_gemma":[0.99910533,0.000004110378,0.00023042268,0.00006719492,0.00003175502,0.000058891736,0.00003035316,6.912658e-7,0.00047123214],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.999196,0.00010934243,0.00020233577,0.00024785736,0.000067085406,0.00017737166],"domain_scores_gemma":[0.9997346,0.000053161828,0.000093113675,0.00006856795,0.000022107024,0.000028449444],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00017598917,0.00007700085,0.00019222434,0.000013862834,0.000064131615,0.000012286318,0.00031094585,0.00012608837,0.002231956],"category_scores_gemma":[0.000022502787,0.00003256158,0.000034247314,0.0001484017,0.000037560163,0.0000567989,0.00009755082,0.000105977466,0.000031220363],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00001458464,0.0000408799,0.052782934,0.000005921738,9.1892616e-7,0.0000064630167,0.0001703497,0.000012784668,0.94493526,0.001105645,0.00001233825,0.00091191864],"study_design_scores_gemma":[0.00039757945,0.00084057485,0.90684223,0.000084732754,0.0000034883449,0.0000051234965,0.00019999953,0.000016057302,0.08363755,0.006821053,0.0009991839,0.00015244646],"about_ca_topic_score_codex":0.0003836184,"about_ca_topic_score_gemma":0.0018218271,"teacher_disagreement_score":0.8612977,"about_ca_system_score_codex":0.00003457415,"about_ca_system_score_gemma":0.0000102279755,"threshold_uncertainty_score":0.9986801},"labels":[],"label_agreement":null},{"id":"W2952230434","doi":"10.1016/j.humpath.2019.06.002","title":"Loss of nuclear localization of thyroid transcription factor 1 and adverse outcomes in papillary thyroid cancer","year":2019,"lang":"en","type":"article","venue":"Human Pathology","topic":"Thyroid Cancer Diagnosis and Treatment","field":"Medicine","cited_by":4,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"Canadian Institutes of Health Research","keywords":"Thyroid; Papillary thyroid cancer; Medicine; Thyroid cancer; Pathology; Cancer; Thyroid Transcription Factor 1; Follicular cell; Cancer research; Internal medicine; Transcription factor; Immunohistochemistry; Thyroid carcinoma; Oncology; Biology; Adenocarcinoma; Gene; Genetics","score_opus":0.01621164065308968,"score_gpt":0.2793398591773626,"score_spread":0.2631282185242729,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2952230434","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9972769,0.0017238773,0.000008774561,0.00020368981,0.00008796051,0.0003578125,0.00004416654,0.000013399437,0.00028341642],"genre_scores_gemma":[0.99833643,0.0012408114,0.000032732107,0.00023290973,0.000014517952,0.000017939072,0.000020168509,0.000017471211,0.00008703344],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9992277,0.00004487959,0.00028683076,0.00020471544,0.000106600295,0.00012929054],"domain_scores_gemma":[0.9995969,0.000019741216,0.00011688733,0.00018496411,0.00004399378,0.000037506376],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00005513174,0.00011282705,0.00042206596,0.00011865125,0.000016340946,0.0000013035119,0.000036234054,0.00009851893,0.00032143976],"category_scores_gemma":[0.0000063298353,0.00009312155,0.00006543166,0.00006975932,0.00009912271,0.000050087707,0.000015797934,0.000071587914,0.000006404138],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011981267,0.00028613603,0.8996662,0.00018629731,0.00004213489,0.00003695883,0.0018351033,0.000036259316,0.096453525,0.00078251585,0.000063303276,0.000491772],"study_design_scores_gemma":[0.0037582098,0.001061609,0.9895604,0.00010766974,0.00006879416,0.000014542261,0.00025687178,0.000027860488,0.004603615,0.000112635185,0.00034280858,0.00008497326],"about_ca_topic_score_codex":0.00019168481,"about_ca_topic_score_gemma":0.00014916426,"teacher_disagreement_score":0.09184991,"about_ca_system_score_codex":0.000058832047,"about_ca_system_score_gemma":0.000023434555,"threshold_uncertainty_score":0.37973866},"labels":[],"label_agreement":null},{"id":"W2987598284","doi":"10.1016/j.humpath.2019.09.015","title":"Etiology of cirrhosis in the young","year":2019,"lang":"en","type":"article","venue":"Human Pathology","topic":"Liver Disease Diagnosis and Treatment","field":"Medicine","cited_by":21,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Royal Columbian Hospital","funders":"","keywords":"Cirrhosis; Etiology; Medicine; Incidence (geometry); Internal medicine; Gastroenterology; Pediatrics","score_opus":0.01754464238184758,"score_gpt":0.29291427144357723,"score_spread":0.2753696290617297,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2987598284","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98578596,0.00023327567,7.06628e-7,0.00042571343,0.00006576003,0.00026377136,0.000004503176,0.0000064565506,0.013213835],"genre_scores_gemma":[0.9991284,0.00003453783,0.000023192777,0.00058104657,0.000023764753,0.000043176497,0.000025290972,0.000004790497,0.00013577896],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9994796,0.000089394875,0.00013097684,0.000130475,0.000057719877,0.000111845126],"domain_scores_gemma":[0.9996238,0.000053497493,0.0000395028,0.0002458398,0.000019755978,0.000017637258],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012093724,0.000056307086,0.00018726439,0.000060974413,0.00001395059,0.0000013600162,0.000060720497,0.00005319653,0.00045954934],"category_scores_gemma":[0.000010301286,0.000035154328,0.000057320103,0.00005205785,0.00005917264,0.000010853973,0.00001802982,0.00006692651,0.00011249611],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000022316173,0.00038141306,0.98637414,0.000024958867,0.000019301631,0.00027534607,0.0010472726,4.6051696e-7,0.0031566964,0.008203826,0.00032048838,0.00017375863],"study_design_scores_gemma":[0.0011241755,0.00046922066,0.996924,0.000016923535,0.000055339737,0.000109584216,0.0002447131,0.0000013167917,0.00033897226,0.00051004835,0.00017500804,0.000030735093],"about_ca_topic_score_codex":0.00004075836,"about_ca_topic_score_gemma":0.000028346061,"teacher_disagreement_score":0.013342443,"about_ca_system_score_codex":0.000015138618,"about_ca_system_score_gemma":0.000013827378,"threshold_uncertainty_score":0.5031743},"labels":[],"label_agreement":null},{"id":"W3002776969","doi":"10.1016/j.humpath.2020.01.001","title":"p63 expression in Merkel cell carcinoma: comparative immunohistochemistry invokes TAp63 as the dominant isoform involved","year":2020,"lang":"en","type":"article","venue":"Human Pathology","topic":"Polyomavirus and related diseases","field":"Medicine","cited_by":13,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia; Fraser Health; Queen Elizabeth II Health Sciences Centre; Dalhousie University; Nova Scotia Health Authority","funders":"Nova Scotia Health Research Foundation","keywords":"Merkel cell carcinoma; Merkel cell polyomavirus; Immunohistochemistry; Interquartile range; Cytokeratin; Merkel cell; Oncology; Pathology; Pathological; Cohort; Medicine; Internal medicine; Biology; Carcinoma","score_opus":0.03777044800224191,"score_gpt":0.30614416805574857,"score_spread":0.2683737200535067,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3002776969","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9789433,0.0071549793,0.0000070874353,0.00066132087,0.00007360303,0.0003447698,0.000011902525,0.000035372213,0.012767647],"genre_scores_gemma":[0.9976022,0.000057151123,0.000044590193,0.0013739119,0.00011278169,0.00005759502,0.00006552708,0.000018819186,0.00066742883],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99876577,0.00009808059,0.00034634763,0.00033834856,0.00014544644,0.0003060344],"domain_scores_gemma":[0.9992746,0.000058801557,0.00013413806,0.0003264265,0.000040374187,0.0001656572],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000097486016,0.00020664786,0.00041771532,0.000051278683,0.00018095199,0.000009602158,0.0001905732,0.00019676304,0.0002431657],"category_scores_gemma":[0.00004226507,0.00013217221,0.00011820596,0.0001270988,0.00033498422,0.00004326059,0.00012933531,0.00047873173,0.00012234882],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00039970464,0.00026737712,0.006869445,0.00008924862,0.000011209549,0.0008328319,0.007954935,0.0000037017262,0.97983676,0.00009603952,0.0035841076,0.000054644846],"study_design_scores_gemma":[0.007154819,0.0009155877,0.07480481,0.00016760944,0.00020851353,0.00013272867,0.0077834553,0.00016497273,0.9035554,0.00044557964,0.0042462917,0.00042021737],"about_ca_topic_score_codex":0.00006692646,"about_ca_topic_score_gemma":0.000008228544,"teacher_disagreement_score":0.07628134,"about_ca_system_score_codex":0.000061237915,"about_ca_system_score_gemma":0.00010940574,"threshold_uncertainty_score":0.5389826},"labels":[],"label_agreement":null},{"id":"W3004069458","doi":"10.1016/j.humpath.2020.01.002","title":"High glypican-3 expression characterizes a distinct subset of ovarian clear cell carcinomas in Canadian patients: an opportunity for targeted therapy","year":2020,"lang":"en","type":"article","venue":"Human Pathology","topic":"Chromatin Remodeling and Cancer","field":"Biochemistry, Genetics and Molecular Biology","cited_by":14,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Calgary Laboratory Services; University of Calgary","funders":"Terry Fox Research Institute; AstraZeneca","keywords":"Glypican 3; Tissue microarray; Clear cell carcinoma; Medicine; Immunohistochemistry; Oncology; Internal medicine; Population; Clear cell; Cancer; Pathology; Cancer research","score_opus":0.02942906210491042,"score_gpt":0.25704421630134083,"score_spread":0.2276151541964304,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3004069458","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9989597,0.000084385574,0.000068427355,0.00009363352,0.000067662004,0.00026268515,0.00036085385,0.000008835509,0.00009381311],"genre_scores_gemma":[0.9967905,0.00002062699,0.0003268364,0.0005598142,0.00012221905,0.00003715426,0.0020985252,0.000025135376,0.00001916588],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99897474,0.00011792257,0.00025577482,0.00033070854,0.00005446836,0.00026640718],"domain_scores_gemma":[0.999321,0.000005613886,0.000116656,0.00024575417,0.000075888594,0.00023509028],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00011468837,0.00013383856,0.00021149617,0.000042252035,0.00006944073,0.0000067988817,0.00017162757,0.00016504299,0.00007120337],"category_scores_gemma":[0.000045417608,0.00012981494,0.00005622,0.000043738695,0.00006007501,0.000004524725,0.00003209755,0.000079999154,8.683146e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00034317648,0.00011821732,0.027677555,0.000035050143,0.0000054756956,0.000008594384,0.00058485713,0.000011633222,0.9701201,0.00002475014,0.00032555443,0.00074504816],"study_design_scores_gemma":[0.0051751337,0.004076446,0.50989145,0.000022332777,0.000013319826,0.0000036110514,0.00022635922,0.00024264211,0.47244957,0.00017262179,0.0072445073,0.0004819889],"about_ca_topic_score_codex":0.0069263536,"about_ca_topic_score_gemma":0.012733,"teacher_disagreement_score":0.49767053,"about_ca_system_score_codex":0.000021272514,"about_ca_system_score_gemma":0.00017478754,"threshold_uncertainty_score":0.9996866},"labels":[],"label_agreement":null},{"id":"W3017487275","doi":"10.1016/j.humpath.2020.04.005","title":"Claudin-4 shows superior specificity for mesothelioma vs non–small-cell lung carcinoma compared with MOC-31 and Ber-EP4","year":2020,"lang":"en","type":"article","venue":"Human Pathology","topic":"Occupational and environmental lung diseases","field":"Medicine","cited_by":29,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia Hospital; Vancouver General Hospital; University of British Columbia","funders":"University of British Columbia","keywords":"Mesothelioma; Lung; Carcinoma; Claudin; Cancer research; Small Cell Lung Carcinoma; Medicine; Internal medicine; Biology; Chemistry; Pathology; Oncology; Small-cell carcinoma; Cell biology; Tight junction","score_opus":0.030195757195985544,"score_gpt":0.2538682116760068,"score_spread":0.22367245448002127,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3017487275","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9958321,0.00038112423,0.00023602093,0.0007808478,0.00003268976,0.0007430715,0.00017140497,0.000044506207,0.0017782238],"genre_scores_gemma":[0.99567544,0.000010697183,0.0013151036,0.0017968317,0.00023245746,0.00007954392,0.00023439794,0.000033648816,0.00062187813],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9989757,0.000026650863,0.00020727118,0.0004203661,0.00012007154,0.00024992722],"domain_scores_gemma":[0.99945575,0.00004269005,0.00005897583,0.00017706458,0.00002558832,0.00023991455],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00004581915,0.0001968801,0.0003765491,0.000049327886,0.00014728964,0.000013807733,0.00007752685,0.00007806429,0.00030979246],"category_scores_gemma":[0.000009037859,0.00016208296,0.00007331771,0.00005576404,0.00020898151,0.00003791106,0.00006327421,0.00010876858,0.000029423016],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0020386348,0.00031386447,0.88939905,0.0004038583,0.000045246376,0.0005749809,0.00091384206,0.000010655232,0.10197181,0.00023350908,0.003966676,0.00012788287],"study_design_scores_gemma":[0.0039303643,0.0016853474,0.98554516,0.000024299157,0.0002746462,0.00015694735,0.00029459075,0.000645803,0.0053096428,0.000067548855,0.001836712,0.00022896024],"about_ca_topic_score_codex":0.0000122352685,"about_ca_topic_score_gemma":0.000022476868,"teacher_disagreement_score":0.09666217,"about_ca_system_score_codex":0.000041127543,"about_ca_system_score_gemma":0.000034521112,"threshold_uncertainty_score":0.66095513},"labels":[],"label_agreement":null},{"id":"W3020879346","doi":"10.1016/j.humpath.2009.10.006","title":"HER-2 amplification is highly homogenous in gastric cancer","year":2009,"lang":"en","type":"letter","venue":"Human Pathology","topic":"HER2/EGFR in Cancer Research","field":"Medicine","cited_by":38,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Women's College Hospital; University of Toronto; Sunnybrook Health Science Centre","funders":"","keywords":"Cancer; Medicine; Pathology; Internal medicine","score_opus":0.08778048155360492,"score_gpt":0.3900565801647532,"score_spread":0.3022760986111483,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3020879346","genre_codex":"commentary","genre_gemma":"commentary","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"commentary","genre_consensus":"commentary","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.080635406,0.006455039,0.000057207533,0.89726925,0.0007035896,0.002012902,0.00021777666,0.00021045776,0.012438384],"genre_scores_gemma":[0.028968323,0.0015126795,0.00038623638,0.9369136,0.0072663273,0.00072095,0.0009987612,0.00019654045,0.023036553],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99666876,0.00028246842,0.00058537105,0.0009286521,0.0005726988,0.0009620272],"domain_scores_gemma":[0.99835527,0.000064744636,0.00019795462,0.0010872397,0.00018702226,0.00010777703],"candidate_categories":["metaepi_narrow","research_integrity","insufficient_payload"],"consensus_categories":["research_integrity"],"category_scores_codex":[0.00036735056,0.00038259893,0.000833824,0.0009087585,0.0000966133,0.000027991251,0.000399529,0.0013402936,0.0020400835],"category_scores_gemma":[0.00004910615,0.00038194493,0.00014746196,0.0004848289,0.00022917124,0.00003179121,0.00006887247,0.003333863,0.00052904576],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000027610637,0.0001038497,0.0042746733,0.0003193014,0.00002595828,0.008799617,0.0005068104,8.854847e-7,0.0032815938,0.000021251546,0.97012305,0.012515388],"study_design_scores_gemma":[0.0010825287,0.0006954242,0.04904708,0.00029821118,0.000084812855,0.0008299706,0.000014616034,0.0000028926324,0.00026128668,0.0005421251,0.94678926,0.00035178356],"about_ca_topic_score_codex":0.0007643897,"about_ca_topic_score_gemma":0.0002052059,"teacher_disagreement_score":0.051667087,"about_ca_system_score_codex":0.00096030894,"about_ca_system_score_gemma":0.0005163034,"threshold_uncertainty_score":0.9999562},"labels":[],"label_agreement":null},{"id":"W3021328778","doi":"10.1016/j.humpath.2020.04.010","title":"Revisiting the distinct histomorphologic features of inflammatory bowel disease–associated neoplastic precursor lesions in the SCENIC and post–DALM Era","year":2020,"lang":"en","type":"article","venue":"Human Pathology","topic":"Inflammatory Bowel Disease","field":"Biochemistry, Genetics and Molecular Biology","cited_by":10,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"Calgary Laboratory Services; University of Washington","keywords":"Dysplasia; Pathology; Medicine; Epithelial dysplasia; Adenoma; Carcinoma; Inflammatory bowel disease; Disease","score_opus":0.011649439884400951,"score_gpt":0.23665462577229812,"score_spread":0.22500518588789717,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3021328778","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9966259,0.0013561881,0.0000127043695,0.0011816169,0.00004736402,0.0003771893,0.000089318644,0.000018436822,0.00029129305],"genre_scores_gemma":[0.99814546,0.000035908884,0.000015652107,0.0013255964,0.0001754992,0.000051764826,0.00017085206,0.000021424696,0.00005783115],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99822176,0.00066804816,0.00032276352,0.00037674682,0.00013230878,0.00027839857],"domain_scores_gemma":[0.9991378,0.00009809325,0.0002141142,0.00037015555,0.00007616375,0.0001036428],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00039900985,0.00019726351,0.00018368583,0.00003531699,0.00022515202,0.000020568095,0.00037829386,0.00013562187,0.00002498546],"category_scores_gemma":[0.0011578131,0.00013313898,0.00010439312,0.0000736831,0.0004337982,0.0000052260616,0.0002003352,0.00028012315,0.0000066274943],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.001314644,0.00023344294,0.7335674,0.0005303609,0.00011701735,0.003673368,0.004361295,0.00015399381,0.24595404,0.0039830348,0.0044497726,0.0016616035],"study_design_scores_gemma":[0.00054138456,0.00012158482,0.9982416,0.000032625103,0.00006742514,0.000036100468,0.00019802304,0.000028767521,0.00013722091,0.00014739919,0.00029494017,0.00015294063],"about_ca_topic_score_codex":0.000003546508,"about_ca_topic_score_gemma":0.000053901767,"teacher_disagreement_score":0.26467416,"about_ca_system_score_codex":0.000015922178,"about_ca_system_score_gemma":0.00009489179,"threshold_uncertainty_score":0.542925},"labels":[],"label_agreement":null},{"id":"W3022742848","doi":"10.1016/j.humpath.2020.02.006","title":"Proteomic analysis of transitional cell carcinoma–like variant of tubo-ovarian high-grade serous carcinoma","year":2020,"lang":"en","type":"article","venue":"Human Pathology","topic":"Ovarian cancer diagnosis and treatment","field":"Medicine","cited_by":5,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canada's Michael Smith Genome Sciences Centre; Centre for Advancing Health Outcomes; Vancouver General Hospital; University of British Columbia","funders":"National Cancer Institute; Terry Fox Foundation; Cancer Research UK; Memorial Sloan-Kettering Cancer Center","keywords":"Biology; Serous carcinoma; Proteomics; Proteome; Ovarian carcinoma; Serous fluid; Immunohistochemistry; Clear cell carcinoma; Tissue microarray; Cancer research; Pathology; Ovarian cancer; Carcinoma; Cancer; Bioinformatics; Medicine; Immunology; Genetics","score_opus":0.026983444643346274,"score_gpt":0.2547649450757206,"score_spread":0.22778150043237433,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3022742848","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9957777,0.00018523424,0.0004418933,0.0019950343,0.00006601882,0.0005420457,0.00034955144,0.00002564947,0.0006168361],"genre_scores_gemma":[0.9970917,0.000008776872,0.0016854068,0.0005694283,0.00012285633,0.000078852565,0.00036273315,0.00002843354,0.000051791354],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99827284,0.00013072173,0.0005758541,0.00050540885,0.00024762194,0.00026754086],"domain_scores_gemma":[0.9990126,0.000037507743,0.00023857506,0.00041675064,0.00011513295,0.00017945736],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00012120474,0.0002256674,0.0009780264,0.00029360788,0.000058197398,0.000004483671,0.00012585154,0.00015587125,0.0009478884],"category_scores_gemma":[0.000008234826,0.0002059248,0.00035218566,0.00052443094,0.00015998438,0.000032618726,0.000035871224,0.00017285718,0.000011768882],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0007832686,0.0030986757,0.65870607,0.0008931284,0.0022947146,0.005681857,0.0072773686,0.00048065672,0.30945483,0.010117093,0.00087266974,0.0003396464],"study_design_scores_gemma":[0.004680154,0.0016295358,0.95454776,0.00002057245,0.0042603356,0.00009149715,0.00008694833,0.00024594076,0.034085676,0.0001350145,0.000051028175,0.00016552025],"about_ca_topic_score_codex":0.000535391,"about_ca_topic_score_gemma":0.000048485563,"teacher_disagreement_score":0.2958417,"about_ca_system_score_codex":0.000074206335,"about_ca_system_score_gemma":0.0001540343,"threshold_uncertainty_score":0.99996537},"labels":[],"label_agreement":null},{"id":"W3024533433","doi":"10.1016/j.humpath.2020.04.012","title":"Data set for the reporting of pheochromocytoma and paraganglioma: explanations and recommendations of the guidelines from the International Collaboration on Cancer Reporting","year":2020,"lang":"en","type":"review","venue":"Human Pathology","topic":"Adrenal and Paraganglionic Tumors","field":"Medicine","cited_by":44,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University Health Network","funders":"National Cancer Institute","keywords":"Paraganglioma; Medicine; Standardization; Context (archaeology); Biobank; Epidemiology; Pheochromocytoma; Risk stratification; Pathology; Computer science; Internal medicine; Bioinformatics; Geography","score_opus":0.44859833745148164,"score_gpt":0.5170086310945747,"score_spread":0.06841029364309309,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3024533433","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0071895253,0.9610476,0.00017703563,0.023672283,0.0007054084,0.0018558977,0.005117265,0.000021752634,0.00021322917],"genre_scores_gemma":[0.023511542,0.95931774,0.002071647,0.0018497996,0.0026938359,0.0007810905,0.008949959,0.000101292615,0.0007230821],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99691355,0.00012339193,0.0023761936,0.00033769198,0.00016080818,0.00008838645],"domain_scores_gemma":[0.9913686,0.00091221783,0.0067741964,0.0006085719,0.00031191012,0.000024515295],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0012067345,0.0001566065,0.0007482639,0.000049687984,0.00023973074,0.000017018268,0.0003039081,0.000095682924,0.000027196782],"category_scores_gemma":[0.0071930997,0.00007457054,0.000101594516,0.00020236809,0.0001664811,0.000039005638,0.00025782615,0.00021160847,3.2199037e-7],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013940335,0.00015682029,0.0011349705,0.0039100125,0.0018401521,0.0016242136,0.0049218284,0.000018527693,0.00010556258,0.008983986,0.14610305,0.8310615],"study_design_scores_gemma":[0.000745116,0.00014565163,0.001864005,0.006464951,0.0026700625,0.005934868,0.0014209015,0.0005098811,0.00007001696,0.0008530845,0.97912127,0.00020022232],"about_ca_topic_score_codex":0.00007200232,"about_ca_topic_score_gemma":0.0003797714,"teacher_disagreement_score":0.8330182,"about_ca_system_score_codex":0.000025429426,"about_ca_system_score_gemma":0.0002936552,"threshold_uncertainty_score":0.8611332},"labels":[],"label_agreement":null},{"id":"W3043690288","doi":"10.1016/j.humpath.2020.07.008","title":"Pathology data set for reporting parathyroid carcinoma and atypical parathyroid neoplasm: recommendations from the International Collaboration on Cancer Reporting","year":2020,"lang":"en","type":"article","venue":"Human Pathology","topic":"Parathyroid Disorders and Treatments","field":"Medicine","cited_by":38,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"Parathyroid carcinoma; Medicine; Cancer; Pathology; Grading (engineering); Parathyroid gland; Carcinoma; Internal medicine; Parathyroid hormone; Biology","score_opus":0.22154638805402974,"score_gpt":0.4256184840733057,"score_spread":0.20407209601927598,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3043690288","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.96491075,0.0019151404,0.00041995922,0.030408585,0.000285665,0.00073020585,0.0008650031,0.00006123366,0.00040346102],"genre_scores_gemma":[0.98652834,0.00017043584,0.0015588006,0.0057078158,0.0005860137,0.00023760041,0.0050384216,0.000031108964,0.00014146304],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9971499,0.000120700206,0.0014242143,0.0008583032,0.0001654412,0.00028144094],"domain_scores_gemma":[0.9968898,0.0002681058,0.0019224681,0.00062502903,0.00016262064,0.00013195144],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000562674,0.0002257295,0.0004823041,0.000045847184,0.00038940203,0.000059882947,0.00023009116,0.00016162236,0.00003944481],"category_scores_gemma":[0.0026760658,0.00017503303,0.00006792481,0.00012778812,0.00012145909,0.0001257683,0.00021115787,0.00027255298,0.000017167675],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0018815458,0.00043574543,0.53419924,0.000017569277,0.00034625086,0.0024278185,0.007406591,0.00003878671,0.07291056,0.0020314397,0.37500972,0.0032947378],"study_design_scores_gemma":[0.009729269,0.0017119355,0.90693086,0.00004083621,0.00064986025,0.0010251056,0.0035426393,0.005746033,0.0020535307,0.0019636657,0.06605393,0.0005523102],"about_ca_topic_score_codex":0.00006008566,"about_ca_topic_score_gemma":0.00036590654,"teacher_disagreement_score":0.37273166,"about_ca_system_score_codex":0.00005902373,"about_ca_system_score_gemma":0.00016590972,"threshold_uncertainty_score":0.71376395},"labels":[],"label_agreement":null},{"id":"W3048622934","doi":"10.1016/j.humpath.2020.08.003","title":"Acute myeloid leukemia with myelodysplasia-related changes diagnosed with multilineage dysplasia alone demonstrates a superior clinical outcome","year":2020,"lang":"en","type":"article","venue":"Human Pathology","topic":"Acute Myeloid Leukemia Research","field":"Medicine","cited_by":8,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Statistics Canada; University of Toronto; University Health Network","funders":"","keywords":"Internal medicine; Medicine; Myeloid leukemia; Preleukemia; Dysplasia; Myelodysplastic syndromes; Cytogenetics; Leukemia; Hematopoietic stem cell transplantation; Oncology; Gastroenterology; Myeloid; NPM1; Transplantation; Bone marrow; Karyotype; Biology; Chromosome","score_opus":0.05021904350207246,"score_gpt":0.343478291107407,"score_spread":0.29325924760533456,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3048622934","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99010104,0.00018516494,0.00016980525,0.005843484,0.0000989555,0.0016387204,0.00007382128,0.0005392335,0.0013497928],"genre_scores_gemma":[0.9880171,0.00021115903,0.005442175,0.0038299775,0.00045674405,0.0002331047,0.000342654,0.00020756664,0.0012595528],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9950681,0.00042303343,0.0011688571,0.0014766513,0.0006348629,0.0012285473],"domain_scores_gemma":[0.99698746,0.0004690321,0.0003295088,0.00089807215,0.00031401005,0.001001906],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00067551865,0.0007371181,0.0018338942,0.00028592287,0.00031330923,0.00005959522,0.00051796186,0.0007401925,0.00069777196],"category_scores_gemma":[0.00040209727,0.00052304426,0.00020647027,0.0007151225,0.0016542972,0.00016228823,0.0002600932,0.0022520346,0.0005073025],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.008019528,0.00062483555,0.778428,0.0004055241,0.0017588373,0.1048339,0.0043708524,0.000028655133,0.093102664,0.00036965372,0.0023708388,0.0056866985],"study_design_scores_gemma":[0.070168264,0.033894807,0.8432678,0.00047215974,0.0029598451,0.017970355,0.0028814,0.0034178195,0.016706714,0.000040008377,0.00598787,0.0022329863],"about_ca_topic_score_codex":0.000043409815,"about_ca_topic_score_gemma":0.00037001882,"teacher_disagreement_score":0.08686354,"about_ca_system_score_codex":0.00032082497,"about_ca_system_score_gemma":0.00080076203,"threshold_uncertainty_score":0.9997221},"labels":[],"label_agreement":null},{"id":"W3084386144","doi":"10.1016/j.humpath.2020.08.010","title":"c-MET immunohistochemistry for differentiating malignant mesothelioma from benign mesothelial proliferations","year":2020,"lang":"en","type":"article","venue":"Human Pathology","topic":"Occupational and environmental lung diseases","field":"Medicine","cited_by":9,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia Hospital; Vancouver General Hospital; University of British Columbia","funders":"","keywords":"Immunohistochemistry; Mesothelioma; Pathology; Medicine; Mesothelial Cell","score_opus":0.03392072455538886,"score_gpt":0.3007463989367921,"score_spread":0.26682567438140325,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3084386144","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9963656,0.0002392912,0.0010671435,0.0007410769,0.00005468554,0.00036929882,0.0005401759,0.00006729681,0.00055540603],"genre_scores_gemma":[0.9939375,0.000004062119,0.0022095132,0.0014435772,0.0004962897,0.00014580127,0.0013946538,0.0000259357,0.00034266326],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99914896,0.000025110827,0.00023774018,0.00030287786,0.00011819223,0.00016712229],"domain_scores_gemma":[0.9995763,0.000043006134,0.00007497366,0.00015937301,0.000021788994,0.00012457442],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00003125223,0.0001340728,0.00023021942,0.000023408786,0.00016898566,0.0000113545,0.00007493473,0.00007948397,0.00091833906],"category_scores_gemma":[0.00006280901,0.00011959031,0.00012474116,0.00003386068,0.000078329154,0.000030871175,0.000042460033,0.000080978956,0.000056713692],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00025602145,0.00016475857,0.032587197,0.000057623998,0.00005396796,0.000038804472,0.0004556486,0.0000036689255,0.96462935,0.0006539544,0.0007743305,0.0003246448],"study_design_scores_gemma":[0.007755455,0.0021019396,0.8060908,0.00012489557,0.0009014999,0.000091348615,0.0005106296,0.000740894,0.1725506,0.00478668,0.0036590365,0.0006862205],"about_ca_topic_score_codex":0.0000060682964,"about_ca_topic_score_gemma":8.5263343e-7,"teacher_disagreement_score":0.7920788,"about_ca_system_score_codex":0.000035261404,"about_ca_system_score_gemma":0.000027446498,"threshold_uncertainty_score":0.99999493},"labels":[],"label_agreement":null},{"id":"W3086809480","doi":"10.1016/j.humpath.2020.08.009","title":"Data set for reporting carcinoma of the thyroid: recommendations from the International Collaboration on Cancer Reporting","year":2020,"lang":"en","type":"review","venue":"Human Pathology","topic":"Thyroid Cancer Diagnosis and Treatment","field":"Medicine","cited_by":36,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University","funders":"National Cancer Institute; National Institutes of Health","keywords":"Medicine; Thyroid cancer; Thyroid carcinoma; Cancer; Disease; Intensive care medicine; Pathology; Internal medicine; General surgery; Thyroid","score_opus":0.3298042609137574,"score_gpt":0.48112276827075834,"score_spread":0.15131850735700092,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3086809480","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.002231372,0.9719654,0.00001664033,0.013986785,0.0014463705,0.0021758385,0.007734844,0.000026977472,0.0004157763],"genre_scores_gemma":[0.0059001353,0.97592384,0.00038399588,0.0012186688,0.0015406169,0.0012576387,0.01348722,0.000063933534,0.00022397898],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9965443,0.00015600763,0.0023575316,0.000595052,0.00020285262,0.00014424157],"domain_scores_gemma":[0.9896486,0.0004079152,0.008517558,0.0012172114,0.00017236399,0.00003639059],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00076359516,0.00022629903,0.0010670963,0.000043221626,0.00020637157,0.00002678249,0.0004816949,0.000142093,0.0001029784],"category_scores_gemma":[0.0022760716,0.00012504138,0.00027599404,0.00016363591,0.000063436,0.000037172656,0.00028569563,0.0002993048,0.000003226124],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00004934864,0.00025913157,0.010296999,0.0015616905,0.0012135527,0.00026494276,0.0012160364,0.0000029020725,0.00007427197,0.0013307134,0.24641854,0.7373119],"study_design_scores_gemma":[0.00044044887,0.00014245466,0.0024579896,0.0028632795,0.0016004494,0.00008030883,0.00017034372,0.000011578528,0.000028110853,0.00009183695,0.9920088,0.00010437439],"about_ca_topic_score_codex":0.0001898697,"about_ca_topic_score_gemma":0.00074031076,"teacher_disagreement_score":0.74559027,"about_ca_system_score_codex":0.0002766542,"about_ca_system_score_gemma":0.0006558471,"threshold_uncertainty_score":0.5099039},"labels":[],"label_agreement":null},{"id":"W3087533766","doi":"10.1016/j.humpath.2020.09.002","title":"Lack of distinct molecular profile of Primary Dermal Melanoma","year":2020,"lang":"en","type":"article","venue":"Human Pathology","topic":"Cutaneous Melanoma Detection and Management","field":"Medicine","cited_by":9,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Vancouver General Hospital","funders":"National Cancer Institute; American Skin Association","keywords":"GNAQ; Neuroblastoma RAS viral oncogene homolog; Melanoma; Cancer research; Biology; Mutation testing; Mutation; Pathology; Medicine; Genetics; Gene; KRAS","score_opus":0.040991828903100574,"score_gpt":0.2825773268273177,"score_spread":0.2415854979242171,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3087533766","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.95868546,0.00008931697,0.00067142915,0.0004995099,0.00004871682,0.00027675106,0.000009173805,0.0000410074,0.03967861],"genre_scores_gemma":[0.9977648,0.0000025261245,0.000634816,0.00096469285,0.00004728175,0.000009707351,0.000035070363,0.000013879478,0.00052719814],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99928933,0.00004536255,0.0002598377,0.00017367302,0.000114841365,0.000116971256],"domain_scores_gemma":[0.9995798,0.0000116216215,0.00011299125,0.00018252044,0.000046402405,0.00006669927],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000058396985,0.000082684426,0.00031794517,0.000055396125,0.000018591567,0.0000013804193,0.000062870284,0.00005631871,0.00059053],"category_scores_gemma":[0.00003628628,0.000077205594,0.00008030375,0.00007965228,0.000104592626,0.0000099160925,0.00007459404,0.000088400346,0.000034617195],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002419525,0.00018688165,0.0067811767,0.00065962505,0.00006379008,0.0021078442,0.0004997653,0.000002779382,0.9814692,0.0028665413,0.0015638183,0.0035566182],"study_design_scores_gemma":[0.006317465,0.0078068753,0.35848895,0.00011844492,0.00060877827,0.0022745,0.0004330694,0.00022741173,0.59690577,0.0005347407,0.025806287,0.00047772087],"about_ca_topic_score_codex":0.0000045168263,"about_ca_topic_score_gemma":0.000001661878,"teacher_disagreement_score":0.38456345,"about_ca_system_score_codex":0.000014750619,"about_ca_system_score_gemma":0.000022007758,"threshold_uncertainty_score":0.6465889},"labels":[],"label_agreement":null},{"id":"W3090463119","doi":"10.1016/j.humpath.2020.09.009","title":"Phospho-histone-H3 immunostaining for pulmonary carcinoids: impact on clinical appraisal, interobserver correlation, and diagnostic processing efficiency","year":2020,"lang":"en","type":"article","venue":"Human Pathology","topic":"Neuroendocrine Tumor Research Advances","field":"Medicine","cited_by":7,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"","keywords":"Pathology; Medicine; Stain; Intraclass correlation; H&E stain; Immunostaining; Staining; Immunohistochemistry","score_opus":0.07542715543346484,"score_gpt":0.4457176412618112,"score_spread":0.37029048582834634,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3090463119","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9946543,0.0019055118,0.0007991275,0.0011660013,0.00016673168,0.0008176959,0.000014398848,0.00011106935,0.0003651434],"genre_scores_gemma":[0.9980662,0.00006926165,0.00034041118,0.0009857969,0.00021941813,0.00008541198,0.00006485408,0.000052623247,0.00011601262],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99799526,0.00016369001,0.00053356466,0.0006260469,0.00020050812,0.00048093635],"domain_scores_gemma":[0.9977038,0.0014412482,0.0001732651,0.0002529479,0.00014737694,0.00028137388],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00029331367,0.00023394232,0.00051418226,0.00010309628,0.00022069347,0.00002817352,0.00015117342,0.00003727719,0.00005525235],"category_scores_gemma":[0.0051574362,0.00019194701,0.00013878272,0.00015908571,0.00041737547,0.00011956078,0.00012831797,0.0005752452,0.000023316928],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0036000006,0.0010918899,0.9348903,0.0008620361,0.00006650277,0.013432808,0.0020975498,0.00025277585,0.01601021,0.0004788632,0.0035832583,0.023633825],"study_design_scores_gemma":[0.005824164,0.020960577,0.9586589,0.00034385084,0.00016913578,0.0032002428,0.00082512706,0.00536249,0.0011062839,0.00038318022,0.002669705,0.00049639115],"about_ca_topic_score_codex":0.0000078651465,"about_ca_topic_score_gemma":0.0000018579472,"teacher_disagreement_score":0.023768572,"about_ca_system_score_codex":0.000051183782,"about_ca_system_score_gemma":0.00011574117,"threshold_uncertainty_score":0.7827372},"labels":[],"label_agreement":null},{"id":"W3091939690","doi":"10.1016/j.humpath.2020.10.001","title":"Data set for reporting of carcinoma of the adrenal cortex: explanations and recommendations of the guidelines from the International Collaboration on Cancer Reporting","year":2020,"lang":"en","type":"article","venue":"Human Pathology","topic":"Adrenal and Paraganglionic Tumors","field":"Medicine","cited_by":36,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; University Health Network","funders":"","keywords":"Pathological; Lymphovascular invasion; Medicine; Adjuvant therapy; Cancer; Adrenocortical carcinoma; Lymph node; Mitotic index; Pathology; Oncology; Internal medicine; Biology; Metastasis; Mitosis","score_opus":0.32184325823182075,"score_gpt":0.4426968147554603,"score_spread":0.12085355652363955,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3091939690","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9530971,0.00009682715,0.000120749086,0.044862043,0.00021421138,0.00030391425,0.0011352145,0.000004537899,0.00016539881],"genre_scores_gemma":[0.9974741,0.0000052082023,0.00039835516,0.0014172298,0.00019731741,0.000018836747,0.00039397756,0.0000060849593,0.000088927576],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99821466,0.00005574169,0.0013602988,0.00016955718,0.00014253621,0.000057200483],"domain_scores_gemma":[0.9956336,0.00017742424,0.0034093312,0.00037089203,0.0003918812,0.000016890013],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005402898,0.000059218768,0.00020050073,0.000018687826,0.00011603441,0.0000038532685,0.00021100312,0.000032838514,0.00003938193],"category_scores_gemma":[0.0050594853,0.000031112922,0.000046701432,0.00012229409,0.000107913955,0.000032072632,0.00014580307,0.00009283985,9.590858e-8],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00038129932,0.00016679127,0.73743635,0.00016624434,0.00032156298,0.00009502275,0.013630476,0.00037929954,0.06720248,0.010209615,0.16647549,0.0035353876],"study_design_scores_gemma":[0.0012618302,0.00020320519,0.96650213,0.00034471133,0.00030713904,0.00031534274,0.0042422283,0.003520625,0.016841201,0.0011594265,0.0052060136,0.0000961665],"about_ca_topic_score_codex":0.00018104655,"about_ca_topic_score_gemma":0.000653362,"teacher_disagreement_score":0.22906578,"about_ca_system_score_codex":0.0000111880445,"about_ca_system_score_gemma":0.00014955594,"threshold_uncertainty_score":0.6057042},"labels":[],"label_agreement":null},{"id":"W3093804071","doi":"10.1016/j.humpath.2020.10.004","title":"Cytokeratin profiles in pituitary neuroendocrine tumors","year":2020,"lang":"en","type":"article","venue":"Human Pathology","topic":"Pituitary Gland Disorders and Treatments","field":"Medicine","cited_by":27,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; University Health Network","funders":"","keywords":"Cytokeratin; Keratin; Pituitary tumors; Pathology; Staining; Immunohistochemistry; Neuroendocrine tumors; Biology; Keratin 8; Medicine","score_opus":0.030541093528489004,"score_gpt":0.2836330109330651,"score_spread":0.2530919174045761,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3093804071","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98977464,0.0003265352,0.00000923069,0.0033859976,0.000035809408,0.00031241082,0.000010861666,0.00006865954,0.0060758353],"genre_scores_gemma":[0.99547684,0.000020184085,0.00018494921,0.0038441045,0.00009064185,0.000038289338,0.00012242961,0.00001688678,0.0002056602],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99912244,0.000051046834,0.0002130175,0.00028695364,0.000079577556,0.0002469826],"domain_scores_gemma":[0.99967647,0.000012633221,0.0000319277,0.00014546758,0.000012803229,0.000120701276],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00002446544,0.00013287521,0.00029096988,0.00007063684,0.00004878966,0.0000044191997,0.000056798763,0.000024955845,0.000313224],"category_scores_gemma":[0.00003601447,0.00011123221,0.000051144827,0.00010149616,0.000056430385,0.000041053172,0.000044400927,0.00016488109,0.00012595193],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002646423,0.0005774659,0.9387312,0.00009785032,0.000024153074,0.041058395,0.0009204755,0.000008612462,0.011727651,0.0015549443,0.003685356,0.0013492851],"study_design_scores_gemma":[0.0069132946,0.0020536766,0.9853187,0.00003079663,0.000044596414,0.0010658442,0.0001966745,0.00011290022,0.0014865147,0.00097250735,0.001615571,0.00018891628],"about_ca_topic_score_codex":0.000025554262,"about_ca_topic_score_gemma":0.000031012227,"teacher_disagreement_score":0.046587538,"about_ca_system_score_codex":0.000012904224,"about_ca_system_score_gemma":0.000027344895,"threshold_uncertainty_score":0.45359182},"labels":[],"label_agreement":null},{"id":"W3095522416","doi":"10.1016/j.humpath.2020.10.005","title":"Whole-proteome analysis of mesonephric-derived cancers describes new potential biomarkers","year":2020,"lang":"en","type":"article","venue":"Human Pathology","topic":"Gestational Trophoblastic Disease Studies","field":"Medicine","cited_by":11,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Vancouver General Hospital; Canada's Michael Smith Genome Sciences Centre; University of British Columbia; BC Cancer Agency","funders":"Canadian Cancer Society Research Institute; BC Cancer Foundation","keywords":"Mesonephric duct; Biology; PAX8; Pathology; Endocrinology; Medicine; Genetics; Kidney; Gene","score_opus":0.03738752269793853,"score_gpt":0.2890670712630691,"score_spread":0.25167954856513053,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3095522416","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9918632,0.00041061518,0.003828055,0.0028124384,0.0000671855,0.00024275114,0.00008430899,0.00005636025,0.00063511205],"genre_scores_gemma":[0.9959464,0.000019463965,0.0028149276,0.00077847333,0.00010621891,0.000017486582,0.0001288786,0.000017293776,0.00017086102],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9987958,0.000064012725,0.0003272627,0.00033973367,0.0002476941,0.00022550221],"domain_scores_gemma":[0.9992676,0.000036120244,0.0001407297,0.00018357117,0.0001389936,0.00023301458],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000055786968,0.00015682491,0.00055650045,0.000273041,0.00007109635,0.0000059392323,0.000095403324,0.00006172979,0.000601264],"category_scores_gemma":[0.000186064,0.00014633953,0.00023593761,0.0006028202,0.00026564536,0.00004067161,0.00006720308,0.00009147744,0.0000331744],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000699531,0.000100866346,0.016842483,0.00013762494,0.005074571,0.00091070414,0.00268321,0.000856578,0.9659223,0.0004658908,0.005661847,0.00064442324],"study_design_scores_gemma":[0.0023406881,0.0006620948,0.9867673,0.000027980295,0.005550181,0.000017737308,0.0011339962,0.00069017085,0.0019257941,0.00031750137,0.0003706458,0.00019593204],"about_ca_topic_score_codex":0.000115343035,"about_ca_topic_score_gemma":0.000040747018,"teacher_disagreement_score":0.9699248,"about_ca_system_score_codex":0.00005556944,"about_ca_system_score_gemma":0.00018134627,"threshold_uncertainty_score":0.6583419},"labels":[],"label_agreement":null},{"id":"W3101702340","doi":"10.1016/j.humpath.2020.11.001","title":"Tumor regression grading after neoadjuvant treatment of esophageal and gastroesophageal junction adenocarcinoma: results of an international Delphi consensus survey","year":2020,"lang":"en","type":"article","venue":"Human Pathology","topic":"Esophageal Cancer Research and Treatment","field":"Medicine","cited_by":21,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Mount Sinai Hospital","funders":"","keywords":"Grading (engineering); Medicine; Adenocarcinoma; Esophagus; Esophageal cancer; Internal medicine; Radiology; Cancer","score_opus":0.06299517286803279,"score_gpt":0.34422800757387867,"score_spread":0.28123283470584587,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3101702340","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9963549,0.0024614227,0.00001265007,0.00027338802,0.000090721725,0.00038537773,0.00028063692,0.000025289164,0.00011561912],"genre_scores_gemma":[0.99861073,0.00006847979,0.0006217777,0.0000752635,0.00015969433,0.000033794127,0.00034975575,0.000020677933,0.00005983311],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9983197,0.00025895025,0.0004659262,0.00044295323,0.00026679185,0.00024567725],"domain_scores_gemma":[0.99904156,0.00008253632,0.00020713649,0.00024871013,0.00014462975,0.00027542593],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00022079835,0.00019436782,0.00048948993,0.00018607399,0.000054068252,0.000007426447,0.000070391325,0.00006951533,0.00007091984],"category_scores_gemma":[0.00011137262,0.0001480275,0.00008194291,0.00011872289,0.0002572386,0.000053955904,0.000050599647,0.00011518185,0.0000035798948],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.016318595,0.00087011606,0.95339745,0.000112288486,0.00016840766,0.01249414,0.0021458706,0.000006388249,0.006481769,0.00007922451,0.00010652375,0.0078192055],"study_design_scores_gemma":[0.0089140255,0.010156026,0.9682819,0.000046244924,0.000081705315,0.00048369655,0.00008202296,0.00014879003,0.011689903,0.00003394541,0.000013281496,0.00006841789],"about_ca_topic_score_codex":0.0002482012,"about_ca_topic_score_gemma":0.000104946994,"teacher_disagreement_score":0.014884469,"about_ca_system_score_codex":0.00010065766,"about_ca_system_score_gemma":0.00007827206,"threshold_uncertainty_score":0.60363865},"labels":[],"label_agreement":null},{"id":"W3112490627","doi":"10.1016/j.humpath.2020.12.003","title":"The cutoff for estrogen and progesterone receptor expression in endometrial cancer revisited: a European Network for Individualized Treatment of Endometrial Cancer collaboration study","year":2020,"lang":"en","type":"article","venue":"Human Pathology","topic":"Endometrial and Cervical Cancer Treatments","field":"Medicine","cited_by":40,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia; Vancouver General Hospital","funders":"","keywords":"Cutoff; Progesterone receptor; Estrogen receptor; Internal medicine; Medicine; Cohort; Oncology; Endometrial cancer; Estrogen; Cancer; Gynecology; Immunohistochemistry; Cohort study; Survival analysis; Breast cancer","score_opus":0.0779644799177242,"score_gpt":0.37694594924756236,"score_spread":0.29898146932983816,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3112490627","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98035985,0.009978302,0.00006411445,0.0007985738,0.000386245,0.0078006093,0.00053546723,0.000030141775,0.00004671844],"genre_scores_gemma":[0.989635,0.001693939,0.0015832714,0.00017776524,0.002270262,0.0042340504,0.00025338272,0.000052833188,0.000099526405],"study_design_codex":"observational","study_design_gemma":"randomized_trial","domain_scores_codex":[0.99794877,0.00042521907,0.0006393759,0.00046265163,0.00019691724,0.00032709443],"domain_scores_gemma":[0.9985251,0.0006559927,0.00034163162,0.0001914177,0.00015335811,0.00013253134],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005191567,0.00022538308,0.00079431373,0.0001617678,0.0001892215,0.000029474235,0.00009845355,0.00008428836,0.00004925459],"category_scores_gemma":[0.00056159945,0.00014532777,0.00011729691,0.00079260016,0.000078885794,0.000047289883,0.00004954728,0.00007372243,0.000001019389],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.093760304,0.0039766063,0.55154705,0.00054941274,0.0016144852,0.00010860172,0.013517087,0.00006239466,0.083276786,0.00045843434,0.0031929747,0.24793588],"study_design_scores_gemma":[0.5563752,0.123214304,0.10440199,0.00063721964,0.003898565,0.000018716168,0.0030356757,0.00007677425,0.03760924,0.00042494075,0.1692881,0.0010192927],"about_ca_topic_score_codex":0.000064126645,"about_ca_topic_score_gemma":0.00013999353,"teacher_disagreement_score":0.46261486,"about_ca_system_score_codex":0.00016644181,"about_ca_system_score_gemma":0.00010144814,"threshold_uncertainty_score":0.5926294},"labels":[],"label_agreement":null},{"id":"W3157730269","doi":"10.1016/j.humpath.2021.04.014","title":"Relative frequency and clinicopathologic characteristics of MYC-rearranged follicular lymphoma","year":2021,"lang":"en","type":"article","venue":"Human Pathology","topic":"Lymphoma Diagnosis and Treatment","field":"Medicine","cited_by":18,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Manitoba Health; University of Manitoba; CancerCare Manitoba","funders":"","keywords":"BCL6; Follicular lymphoma; Gene rearrangement; Immunohistochemistry; Biology; Lymphoma; Fluorescence in situ hybridization; Pathology; Molecular biology; PAX8; Tissue microarray; Cancer research; Gene; Medicine; Genetics; Antibody; Immunology; Germinal center; Chromosome","score_opus":0.03008330761971788,"score_gpt":0.2991014746689264,"score_spread":0.2690181670492085,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3157730269","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99236417,0.0021963832,0.000026123837,0.00031391997,0.00011130705,0.00018825574,0.00003149632,0.000033135515,0.004735195],"genre_scores_gemma":[0.9968871,0.00041729954,0.0016669563,0.00042874625,0.00006797093,0.000036689573,0.00012652497,0.00001662626,0.00035209383],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9987374,0.00017914776,0.00040298843,0.00036558253,0.00011237822,0.00020250154],"domain_scores_gemma":[0.9991408,0.0001090018,0.00017468404,0.000366373,0.00011623791,0.00009289608],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00019100554,0.00016018018,0.00058451307,0.00006708562,0.0000811143,0.0000069056564,0.00004151328,0.00018748485,0.00014967102],"category_scores_gemma":[0.00021367481,0.0001334829,0.000126448,0.000097026576,0.00022242602,0.000038156162,0.000060408438,0.000074673655,0.00003075328],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000054715427,0.0012220076,0.902988,0.000087595276,0.00013703818,0.015272128,0.00086947996,2.1544308e-8,0.052162275,0.013965711,0.00010240544,0.013138578],"study_design_scores_gemma":[0.0033759624,0.0007840819,0.9847195,0.00007930804,0.00028619156,0.0018106736,0.00008939021,0.0000015041755,0.0053997864,0.0029286612,0.0004116787,0.00011327691],"about_ca_topic_score_codex":0.000010078331,"about_ca_topic_score_gemma":0.000007075638,"teacher_disagreement_score":0.08173144,"about_ca_system_score_codex":0.000052852763,"about_ca_system_score_gemma":0.00008721243,"threshold_uncertainty_score":0.5443275},"labels":[],"label_agreement":null},{"id":"W3162011986","doi":"10.1016/j.humpath.2021.05.002","title":"Follicular cells in pituitary neuroendocrine tumors","year":2021,"lang":"en","type":"article","venue":"Human Pathology","topic":"Pituitary Gland Disorders and Treatments","field":"Medicine","cited_by":11,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; University Health Network","funders":"","keywords":"Pathology; Biology; Corticotropic cell; Immunohistochemistry; Thyrotropic cell; Keratin; Pituitary gland; Somatotropic cell; Endocrinology; Hormone; Medicine","score_opus":0.016563102156921142,"score_gpt":0.27084049484093686,"score_spread":0.2542773926840157,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3162011986","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9900391,0.0010434021,0.0000094834695,0.00050068786,0.00011247105,0.00014597125,0.000008091655,0.000036003777,0.008104768],"genre_scores_gemma":[0.99649423,0.000085002284,0.00018905655,0.0012848137,0.00004604686,0.000020080683,0.00013395162,0.000016941538,0.0017299023],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99905074,0.000066133485,0.00019817431,0.00031175665,0.000087777385,0.00028543716],"domain_scores_gemma":[0.9995549,0.00001582282,0.000026690934,0.0002937237,0.00002460244,0.000084273524],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000033345696,0.00012778398,0.0003033162,0.00009793723,0.000048002046,0.0000044646863,0.000043976976,0.0000315528,0.00041095985],"category_scores_gemma":[0.000017720571,0.000114544404,0.00008471342,0.00012930689,0.0000452299,0.000031125153,0.000050886676,0.00014134949,0.00010815479],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001025332,0.001980649,0.5351839,0.000092111746,0.00006314751,0.39408138,0.0003315607,0.000017331758,0.061755303,0.0019237597,0.0027801343,0.001688173],"study_design_scores_gemma":[0.009561968,0.00077687786,0.95627296,0.000061054045,0.00011298557,0.0065216785,0.0002123584,0.000023674353,0.015687538,0.004186976,0.0063219992,0.00025992582],"about_ca_topic_score_codex":0.000037019672,"about_ca_topic_score_gemma":0.00012435995,"teacher_disagreement_score":0.42108905,"about_ca_system_score_codex":0.000022158189,"about_ca_system_score_gemma":0.000043950466,"threshold_uncertainty_score":0.4670985},"labels":[],"label_agreement":null},{"id":"W3195938695","doi":"10.1016/j.humpath.2021.08.003","title":"Relationship between p63 and p53 expression in Merkel cell carcinoma and corresponding abnormalities in TP63 and TP53: a study and a proposal","year":2021,"lang":"en","type":"article","venue":"Human Pathology","topic":"Polyomavirus and related diseases","field":"Medicine","cited_by":10,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University; Nova Scotia Health Authority; Queen Elizabeth II Health Sciences Centre","funders":"","keywords":"Merkel cell carcinoma; Expression (computer science); P53 expression; Merkel cell; Carcinoma; Oncology; Pathology; Internal medicine; Biology; Immunohistochemistry; Medicine; Cancer research; Computer science","score_opus":0.039233793761623864,"score_gpt":0.3128407845334117,"score_spread":0.27360699077178785,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3195938695","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99106574,0.008074924,0.0000016543725,0.00008872251,0.000024872037,0.0003177127,0.00001158494,0.000014248771,0.00040056565],"genre_scores_gemma":[0.99929273,0.00005893841,0.000101631114,0.00003472125,0.000031039504,0.00002139579,0.000018246887,0.000013235188,0.00042804374],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9988976,0.0002502387,0.00025193213,0.00032647297,0.00007772684,0.00019604273],"domain_scores_gemma":[0.99949014,0.00020265717,0.00005161033,0.00012266025,0.000017609149,0.00011534799],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00025500622,0.00012900638,0.00030493003,0.0002520873,0.00012282513,0.000022358636,0.000020585761,0.00014046089,0.000012159264],"category_scores_gemma":[0.00009804612,0.000111327856,0.0000124540575,0.00010463438,0.00017800715,0.000081012266,0.00012432714,0.0002671902,6.1864006e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000084625884,0.00016573968,0.9839113,0.00011246622,0.0000036992742,0.0018680224,0.008383144,1.2714415e-7,0.005063609,0.00016075122,0.000011717313,0.00023483354],"study_design_scores_gemma":[0.0034593204,0.00037578566,0.9891363,0.00010378375,0.00008359212,0.00028056063,0.0053638327,0.000014260812,0.0004716627,0.00058585755,0.000013442766,0.000111646805],"about_ca_topic_score_codex":0.000072314586,"about_ca_topic_score_gemma":0.00014810642,"teacher_disagreement_score":0.008227034,"about_ca_system_score_codex":0.000016145146,"about_ca_system_score_gemma":0.000053291482,"threshold_uncertainty_score":0.45398182},"labels":[],"label_agreement":null},{"id":"W4200481257","doi":"10.1016/j.humpath.2021.12.006","title":"ABCC2 expression in papillary renal cell carcinoma provides better prognostic stratification than WHO/ISUP nucleolar grade","year":2021,"lang":"en","type":"article","venue":"Human Pathology","topic":"Renal cell carcinoma treatment","field":"Medicine","cited_by":12,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hospital for Sick Children; Calgary Laboratory Services; University of Calgary; Chinook Regional Hospital; St. John’s Health Sciences Centre; McGill University Health Centre; St. Michael's Hospital; University of Toronto; Ontario Institute for Cancer Research","funders":"Canadian Urological Association Scholarship Fund","keywords":"Medicine; Papillary renal cell carcinomas; Internal medicine; Univariate analysis; Pathology; Oncology; Renal cell carcinoma; Hazard ratio; Cohort; Multivariate analysis; Confidence interval","score_opus":0.03082853076250214,"score_gpt":0.26652868193806095,"score_spread":0.23570015117555881,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4200481257","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99480456,0.0014450434,0.000048278114,0.0006106957,0.000080311285,0.00070390804,0.000007983985,0.000060407456,0.0022387905],"genre_scores_gemma":[0.99643826,0.000025590734,0.0015640719,0.00030985716,0.00017697919,0.0001506803,0.00035995268,0.00004868246,0.0009259295],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99780524,0.0003536144,0.00047297694,0.00068437826,0.00026747157,0.0004163133],"domain_scores_gemma":[0.9988931,0.00007409333,0.0001386941,0.0006487159,0.00010366837,0.000141747],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00018272107,0.0002694359,0.00043380685,0.00018252185,0.000117312054,0.00003022249,0.0001108943,0.00022838214,0.00020335332],"category_scores_gemma":[0.00005130709,0.00023561918,0.0001196366,0.0001785313,0.00012345373,0.00009921944,0.00008421894,0.0003699976,0.00006623315],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000039664217,0.00039701813,0.34709066,0.00016300095,0.0000061565906,0.0061095343,0.0008698654,0.0000019128167,0.64437944,0.00007607655,0.00040776702,0.00045890154],"study_design_scores_gemma":[0.0011710355,0.0005329529,0.6441599,0.00011127344,0.000067759574,0.0004535517,0.0001805041,0.00001756912,0.3524717,0.00045389248,0.00022694872,0.0001529194],"about_ca_topic_score_codex":0.000018910123,"about_ca_topic_score_gemma":0.00006323237,"teacher_disagreement_score":0.29706922,"about_ca_system_score_codex":0.00013374585,"about_ca_system_score_gemma":0.00013120758,"threshold_uncertainty_score":0.9608271},"labels":[],"label_agreement":null},{"id":"W4210477520","doi":"10.1016/j.humpath.2022.01.008","title":"Appendiceal sessile serrated lesions are distinct from their right-sided colonic counterparts and may be precursors for appendiceal mucinous neoplasms","year":2022,"lang":"en","type":"article","venue":"Human Pathology","topic":"Intraperitoneal and Appendiceal Malignancies","field":"Medicine","cited_by":21,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"Immunostaining; KRAS; Pathology; Medicine; GNAS complex locus; Hyperplastic Polyp; Immunohistochemistry; Internal medicine; Gastroenterology; Chemistry; Colorectal cancer; Colonoscopy; Cancer","score_opus":0.030896424802040683,"score_gpt":0.2830681311744305,"score_spread":0.25217170637238984,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4210477520","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9914678,0.00059965416,0.000035326684,0.0015911866,0.0006051241,0.0013246628,0.0023857036,0.00021697902,0.0017736158],"genre_scores_gemma":[0.99316,0.000017360973,0.00013515765,0.001187789,0.00028016846,0.00053878326,0.002323965,0.00007166934,0.0022850689],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9972995,0.0002704279,0.00054165337,0.0008321531,0.0002984921,0.00075776066],"domain_scores_gemma":[0.99853784,0.0003376511,0.00035146507,0.00043706162,0.00008524335,0.0002507668],"candidate_categories":["metaepi_narrow","sts","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00034633503,0.00041840275,0.00083412236,0.00016347709,0.0014781412,0.000045990648,0.00025793747,0.00020384374,0.0025719325],"category_scores_gemma":[0.000047089892,0.00035907334,0.00016689622,0.00016918614,0.0004378507,0.00008946277,0.00029031964,0.0005806016,0.000026571965],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.014722975,0.009108745,0.33891797,0.0022090413,0.0023925188,0.024693927,0.059220407,0.00016990124,0.36341608,0.03645438,0.14217587,0.006518212],"study_design_scores_gemma":[0.02027724,0.0130118895,0.59411967,0.0006547519,0.0016758521,0.012214461,0.019187061,0.0017896758,0.015021594,0.008249011,0.31120548,0.0025933175],"about_ca_topic_score_codex":0.00030752734,"about_ca_topic_score_gemma":0.00089039264,"teacher_disagreement_score":0.34839448,"about_ca_system_score_codex":0.00013110504,"about_ca_system_score_gemma":0.00015141864,"threshold_uncertainty_score":0.9998861},"labels":[],"label_agreement":null},{"id":"W4212917902","doi":"10.1016/j.humpath.2022.01.009","title":"Development and validation of a quantitative reactive stroma biomarker (qRS) for prostate cancer prognosis","year":2022,"lang":"en","type":"article","venue":"Human Pathology","topic":"Prostate Cancer Diagnosis and Treatment","field":"Medicine","cited_by":25,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"DOD Prostate Cancer Research Program; National Center for Research Resources; National Cancer Institute; National Institutes of Health; Canary Foundation","keywords":"Prostate cancer; Prostatectomy; Medicine; Biomarker; Oncology; Internal medicine; Biochemical recurrence; Prostate; Cohort; Cancer; Pathology; Biology","score_opus":0.07668145621596079,"score_gpt":0.359830291442758,"score_spread":0.28314883522679724,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4212917902","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9971035,0.0007223127,0.000033740816,0.00043265056,0.0000631756,0.0013152694,0.00020007322,0.000017166765,0.00011210368],"genre_scores_gemma":[0.99082255,0.00005162711,0.0038784568,0.000089856105,0.000009062782,0.004776391,0.00022190464,0.000016772674,0.00013335573],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99919415,0.000051953255,0.00022549418,0.0002663908,0.00010616426,0.0001558411],"domain_scores_gemma":[0.9995497,0.000053089003,0.00016831621,0.00008820304,0.000100023826,0.000040691823],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001757461,0.000102363134,0.000247285,0.00010134164,0.00016424712,0.0000041907497,0.000027808877,0.000024986897,0.00006885531],"category_scores_gemma":[0.000016326936,0.00009164361,0.00003708964,0.00008046894,0.00007470811,0.000033300617,0.000055661752,0.000057270325,5.6953854e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.003186459,0.0026615197,0.61948454,0.000818377,0.0011870565,0.00029374656,0.049368426,0.000017930108,0.23158911,0.009889619,0.001765541,0.07973768],"study_design_scores_gemma":[0.006016451,0.0047030654,0.7411609,0.000114245115,0.000348473,0.00007537684,0.0038342958,0.00003454673,0.23017462,0.00075271516,0.012543423,0.00024184854],"about_ca_topic_score_codex":0.000033203632,"about_ca_topic_score_gemma":0.00002404494,"teacher_disagreement_score":0.1216764,"about_ca_system_score_codex":0.00019531588,"about_ca_system_score_gemma":0.00011823448,"threshold_uncertainty_score":0.3737118},"labels":[],"label_agreement":null},{"id":"W4214941222","doi":"10.1016/j.humpath.2022.02.018","title":"Neuroectodermal elements are part of the morphological spectrum of DICER1-associated neoplasms","year":2022,"lang":"en","type":"article","venue":"Human Pathology","topic":"Congenital Diaphragmatic Hernia Studies","field":"Medicine","cited_by":19,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Jewish General Hospital; Montreal Children's Hospital","funders":"","keywords":"Pathology; Primitive neuroectodermal tumor; Biology; Ovary; Germline; Metastasis; Neuroectodermal tumor; Sarcoma; Medicine; Cancer; Endocrinology; Genetics","score_opus":0.02998277885425519,"score_gpt":0.26795101473231187,"score_spread":0.23796823587805668,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4214941222","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99553233,0.00011026534,0.0000015400414,0.0009699089,0.00024170043,0.0003448846,0.000100666926,0.000029394001,0.0026693314],"genre_scores_gemma":[0.9985159,0.0000057349866,0.000015134309,0.00056349114,0.00002861379,0.00005635996,0.000018668881,0.00001536508,0.00078075327],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99836826,0.0003378663,0.00048042604,0.00022094311,0.00032782007,0.00026466223],"domain_scores_gemma":[0.9990865,0.00009935351,0.00037543153,0.00035207524,0.000048168182,0.00003847262],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00027459313,0.00012693592,0.00047452492,0.00006822348,0.00018601365,0.0000016887244,0.00019759378,0.00004853711,0.0016652978],"category_scores_gemma":[0.00029773315,0.00009399685,0.00015801568,0.00019636353,0.0002675451,0.000011770579,0.0005153316,0.00030986065,0.000008621252],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010699616,0.0009100167,0.95352316,0.00006678127,0.00017741385,0.00092717237,0.0010194661,0.000015100499,0.03897171,0.00042117905,0.0036094973,0.00025153102],"study_design_scores_gemma":[0.001430783,0.0007688095,0.99403113,0.000018049011,0.00014475132,0.00029607757,0.00045223357,0.000024321882,0.0013455559,0.0004678173,0.0009374646,0.00008302014],"about_ca_topic_score_codex":0.000014015703,"about_ca_topic_score_gemma":0.000079166195,"teacher_disagreement_score":0.040507983,"about_ca_system_score_codex":0.000052966036,"about_ca_system_score_gemma":0.00003484608,"threshold_uncertainty_score":0.9992473},"labels":[],"label_agreement":null},{"id":"W4221081151","doi":"10.1016/j.humpath.2022.03.003","title":"Chronic kidney damage pathology score for systematic assessment of the non-neoplastic kidney tissue and prediction of post-operative renal function outcomes","year":2022,"lang":"en","type":"article","venue":"Human Pathology","topic":"Chronic Kidney Disease and Diabetes","field":"Medicine","cited_by":8,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"George & Fay Yee Centre for Healthcare Innovation; University of Manitoba","funders":"","keywords":"Medicine; Nephrectomy; Renal function; Kidney; Kidney disease; Urology; Pathology; Internal medicine","score_opus":0.015033321918405859,"score_gpt":0.29894438451413397,"score_spread":0.2839110625957281,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4221081151","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99398935,0.00030443515,0.0008695031,0.00063124707,0.00049013156,0.00233547,0.0010925991,0.000029036179,0.0002582348],"genre_scores_gemma":[0.99730897,0.0000061582714,0.000103256476,0.0009150405,0.000099127035,0.00062706135,0.000491555,0.00002510835,0.00042373553],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9982778,0.00032936863,0.00056993106,0.00033763543,0.0002406089,0.00024470108],"domain_scores_gemma":[0.9986781,0.00018036905,0.0003620543,0.00043982072,0.00016433475,0.00017535489],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00045883982,0.0001883492,0.00070352625,0.00016266601,0.0002769324,0.0000059408085,0.00012052404,0.00009310979,0.00030318173],"category_scores_gemma":[0.00058716006,0.0001346169,0.00014059703,0.00012438135,0.00026412858,0.00005167311,0.00018728811,0.00022212695,0.0000013000745],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00026595322,0.0007522133,0.19199462,0.0308246,0.000519653,0.000090773035,0.0020571593,0.00013457333,0.7644,0.0040588123,0.0047559403,0.00014569458],"study_design_scores_gemma":[0.011526672,0.012953349,0.9573624,0.0036738515,0.0026507436,0.00037248453,0.0011857678,0.0025982743,0.0063022017,0.000760019,0.00032391827,0.00029030853],"about_ca_topic_score_codex":0.000008628726,"about_ca_topic_score_gemma":0.0000078748835,"teacher_disagreement_score":0.7653678,"about_ca_system_score_codex":0.00018942438,"about_ca_system_score_gemma":0.00087505416,"threshold_uncertainty_score":0.5489518},"labels":[],"label_agreement":null},{"id":"W4223535166","doi":"10.1016/j.humpath.2022.04.006","title":"TRPS1, GATA3, and SOX10 expression in triple-negative breast carcinoma","year":2022,"lang":"en","type":"article","venue":"Human Pathology","topic":"Metastasis and carcinoma case studies","field":"Medicine","cited_by":78,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"GATA3; Triple-negative breast cancer; Pathology; Medicine; Apocrine; Carcinoma; Cancer research; Breast cancer; Cancer; Internal medicine; Biology","score_opus":0.03125273387992133,"score_gpt":0.28507549873233085,"score_spread":0.2538227648524095,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4223535166","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9937348,0.000992771,0.0000054169755,0.0003820818,0.000116707764,0.00031704226,0.00007106725,0.000023188868,0.0043569366],"genre_scores_gemma":[0.9982271,0.000021163178,0.00016989923,0.0003512074,0.00007963602,0.0001414155,0.00003058935,0.000017571507,0.00096142036],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99863553,0.0002889653,0.00026293655,0.00037692432,0.0001738073,0.0002618103],"domain_scores_gemma":[0.9995214,0.00005013593,0.000078524696,0.0002457994,0.00002745677,0.00007668119],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00035951607,0.00014856561,0.00042114468,0.00020132728,0.00029593307,0.0000054829297,0.00006255511,0.00003757821,0.0007341352],"category_scores_gemma":[0.00003934463,0.00013064171,0.00006164179,0.00013945549,0.00016031631,0.0000300292,0.00028136847,0.00032074307,0.000006571839],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0019803215,0.0014360936,0.7073169,0.0003307752,0.00009285257,0.027519016,0.023227572,0.000008362185,0.19598481,0.004747957,0.020092042,0.01726331],"study_design_scores_gemma":[0.004223962,0.00073620526,0.98197806,0.000020583771,0.00005241124,0.0052807718,0.0039029317,0.000014951519,0.0015168075,0.00055735064,0.0015489139,0.00016704154],"about_ca_topic_score_codex":0.000039573555,"about_ca_topic_score_gemma":0.00004440667,"teacher_disagreement_score":0.27466118,"about_ca_system_score_codex":0.000059285623,"about_ca_system_score_gemma":0.000031796782,"threshold_uncertainty_score":0.8038266},"labels":[],"label_agreement":null},{"id":"W4224255161","doi":"10.1016/j.humpath.2022.04.009","title":"Metastatic nonhematopoietic neoplasms to the breast: a study of 238 cases","year":2022,"lang":"en","type":"review","venue":"Human Pathology","topic":"Breast Lesions and Carcinomas","field":"Medicine","cited_by":15,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Ottawa","funders":"","keywords":"Medicine; Metastasis; Breast cancer; Pathology; Metastatic carcinoma; Primary tumor; Metastatic breast cancer; Ductal carcinoma; Adenocarcinoma; Sarcoma; Breast carcinoma; Radiology; Carcinoma; Oncology; Cancer; Internal medicine","score_opus":0.14399288567430824,"score_gpt":0.38984029728983693,"score_spread":0.2458474116155287,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4224255161","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.022411779,0.9736954,0.000005815311,0.00009803568,0.0002188084,0.0028395057,0.00013541286,0.000038385533,0.0005568492],"genre_scores_gemma":[0.043477207,0.94932604,0.0001560439,0.00050226226,0.0003724784,0.0027190316,0.00028963032,0.00023496826,0.0029223566],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9973294,0.0007355854,0.00076996896,0.0005153841,0.00033111376,0.00031854547],"domain_scores_gemma":[0.99795115,0.0003432701,0.00033188396,0.0011910304,0.000052790434,0.00012986317],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.000526313,0.00037833888,0.0022447067,0.0003379951,0.00021191756,0.000009446166,0.0003737571,0.00009452336,0.002055855],"category_scores_gemma":[0.000072061186,0.00022806041,0.0004360593,0.00047398236,0.00009547881,0.000012152531,0.00038243338,0.00056631846,0.0001261673],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000084285566,0.0047400976,0.0002127839,0.019299904,0.0009406229,0.024567783,0.0059857783,0.0000019344207,0.0000067381634,0.0010190916,0.005852403,0.9372886],"study_design_scores_gemma":[0.0008262515,0.003086083,0.001321203,0.0014303674,0.0058986074,0.12369663,0.0024405494,4.2520242e-7,1.5377634e-7,0.000022396824,0.86099625,0.00028110307],"about_ca_topic_score_codex":0.00006538616,"about_ca_topic_score_gemma":0.00009834528,"teacher_disagreement_score":0.9370075,"about_ca_system_score_codex":0.00007146826,"about_ca_system_score_gemma":0.000218133,"threshold_uncertainty_score":0.9988564},"labels":[],"label_agreement":null},{"id":"W4224998175","doi":"10.1016/j.humpath.2022.04.013","title":"Morphologic alterations post trimodal therapy in muscle-invasive urothelial carcinoma: understanding the impact of post-treatment changes on the pathological interpretation and their potential clinical correlates","year":2022,"lang":"en","type":"article","venue":"Human Pathology","topic":"Bladder and Urothelial Cancer Treatments","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University Health Centre","funders":"","keywords":"Medicine; Bladder cancer; Pathological; Cancer; Pathology; Fibrosis; Stage (stratigraphy); Carcinoma; Carcinoma in situ; Retrospective cohort study; Internal medicine; Oncology; Biology","score_opus":0.08572796945552806,"score_gpt":0.3445784314609898,"score_spread":0.25885046200546175,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4224998175","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99535,0.00040074968,0.0000706108,0.0023661517,0.00018782687,0.0011416178,0.0002444823,0.000022068794,0.00021649098],"genre_scores_gemma":[0.9981441,0.00019023307,0.0000070235274,0.0011322544,0.00010794549,0.00025728202,0.00011020156,0.000020163932,0.000030827432],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99794674,0.0009650677,0.00035076556,0.00036472123,0.00012583165,0.0002468986],"domain_scores_gemma":[0.9988746,0.00054584176,0.00017136509,0.00030383878,0.000054088847,0.000050250084],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00043728086,0.00023413335,0.00041243996,0.00013689944,0.00041054425,0.000017109054,0.00012967628,0.00010401256,0.00030331354],"category_scores_gemma":[0.00007193211,0.000108331275,0.00023118562,0.00011632142,0.00039510676,0.000022612725,0.00008151672,0.00038101827,0.000002607727],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.018920958,0.009602152,0.54634273,0.00003579527,0.001205502,0.004101499,0.09967289,0.0011487931,0.27519622,0.008129569,0.00022001332,0.035423856],"study_design_scores_gemma":[0.0062884586,0.04186715,0.9372998,0.000019281251,0.00010507915,0.000771649,0.00954578,0.00034393667,0.0006523875,0.0029358885,0.000008511745,0.0001620671],"about_ca_topic_score_codex":0.00024707665,"about_ca_topic_score_gemma":0.00018039368,"teacher_disagreement_score":0.3909571,"about_ca_system_score_codex":0.00028406776,"about_ca_system_score_gemma":0.00014723385,"threshold_uncertainty_score":0.44176212},"labels":[],"label_agreement":null},{"id":"W4245551462","doi":"10.1016/j.humpath.2018.01.012","title":"Is focal active colitis of greater clinical significance in pediatric patients? A retrospective review of 68 cases with clinical correlation","year":2018,"lang":"en","type":"review","venue":"Human Pathology","topic":"Microscopic Colitis","field":"Medicine","cited_by":6,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Children's Hospital of Western Ontario; London Health Sciences Centre; Western University","funders":"","keywords":"Medicine; Retrospective cohort study; Clinical significance; Correlation; Colitis; Internal medicine","score_opus":0.12044333755247066,"score_gpt":0.45152117306250883,"score_spread":0.33107783551003817,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4245551462","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.049334094,0.9448545,0.000020993675,0.000017084172,0.0004606062,0.0038636054,0.00053683296,0.000021126949,0.0008911578],"genre_scores_gemma":[0.008134865,0.9901322,0.0001873598,0.00023403396,0.0005154034,0.00015949026,0.00031395227,0.00006065693,0.00026201375],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9939854,0.001164252,0.0031941072,0.00097265444,0.00032765107,0.00035590507],"domain_scores_gemma":[0.99520206,0.0006898053,0.0024127767,0.000842371,0.0007147515,0.00013821488],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0011224733,0.0004307171,0.0051246574,0.00030739637,0.000031742744,0.0000029454793,0.00020753113,0.0007881904,0.0007270257],"category_scores_gemma":[0.0013312995,0.0003381354,0.00069187745,0.00048241278,0.0009127969,0.00004475499,0.00012878867,0.0010092715,0.000053734984],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00063963915,0.001388822,0.7752513,0.12067689,0.00026826694,0.00094278064,0.00029713594,4.3568975e-9,8.511375e-8,0.00010086345,0.00820158,0.09223258],"study_design_scores_gemma":[0.0025832655,0.008808772,0.8650048,0.081946015,0.0034522892,0.00035797054,0.000008253456,2.3273424e-7,0.0000012646065,0.000035959096,0.03744572,0.0003555025],"about_ca_topic_score_codex":0.000055027092,"about_ca_topic_score_gemma":0.00007495165,"teacher_disagreement_score":0.09187708,"about_ca_system_score_codex":0.0002518497,"about_ca_system_score_gemma":0.00069809356,"threshold_uncertainty_score":0.9999071},"labels":[],"label_agreement":null},{"id":"W4286435192","doi":"10.1016/j.humpath.2022.07.007","title":"Prognostic value of complex glandular patterns in invasive pulmonary adenocarcinomas","year":2022,"lang":"en","type":"article","venue":"Human Pathology","topic":"Lung Cancer Diagnosis and Treatment","field":"Medicine","cited_by":12,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University Health Centre; Université Laval; Institut universitaire de cardiologie et de pneumologie de Québec","funders":"","keywords":"Cribriform; Adenocarcinoma; Pathology; Biology; Medicine; Carcinoma; Internal medicine; Cancer","score_opus":0.03650336419552739,"score_gpt":0.2952557993494308,"score_spread":0.2587524351539034,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4286435192","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9971435,0.0006265607,0.0000033761366,0.00045807986,0.00007651714,0.00053753296,0.000059614405,0.000018476727,0.0010763512],"genre_scores_gemma":[0.99869734,0.000030822455,0.000054393684,0.0004366441,0.000046064953,0.00035757842,0.00028908282,0.000018391018,0.00006968382],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9989386,0.00015427802,0.00026105327,0.0002774479,0.00016348594,0.00020510725],"domain_scores_gemma":[0.9994922,0.00007556863,0.00009084968,0.00026666216,0.000025168845,0.000049545244],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001238151,0.000111815076,0.00033956158,0.00015371892,0.00007304808,0.0000020805787,0.00008953787,0.00003815705,0.0008126968],"category_scores_gemma":[0.000019635692,0.00010468257,0.00007221394,0.00010912843,0.000061602186,0.000015241696,0.00013747958,0.00016965588,0.00000720859],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000055660134,0.0008314524,0.98735714,0.00014366899,0.00003422234,0.00566895,0.00075745455,0.000027588087,0.0035006816,0.001186591,0.00016953946,0.00026702907],"study_design_scores_gemma":[0.0016520778,0.0012899241,0.99460626,0.00005960057,0.00009533948,0.00069346465,0.0003111169,0.000028263737,0.00048297766,0.0004889623,0.00020920826,0.0000828055],"about_ca_topic_score_codex":0.0002676201,"about_ca_topic_score_gemma":0.00011402558,"teacher_disagreement_score":0.007249097,"about_ca_system_score_codex":0.00019339827,"about_ca_system_score_gemma":0.000070165355,"threshold_uncertainty_score":0.889846},"labels":[],"label_agreement":null},{"id":"W4292791407","doi":"10.1016/j.humpath.2022.07.021","title":"Morphological patterns of metastases from combined Merkel cell carcinomas: study of an eastern Canadian cohort of cases","year":2022,"lang":"en","type":"article","venue":"Human Pathology","topic":"Polyomavirus and related diseases","field":"Medicine","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Vancouver Island University; Queen Elizabeth II Health Sciences Centre; Nova Scotia Health Authority; Dalhousie University","funders":"","keywords":"Merkel cell; Merkel cell carcinoma; Cohort; Medicine; Pathology; Oncology; Carcinoma","score_opus":0.034479809815265626,"score_gpt":0.28119026979841116,"score_spread":0.24671045998314553,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4292791407","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99580956,0.0005733397,0.0000011714519,0.000014239246,0.0000960982,0.00053305354,0.0026379696,0.000015952895,0.00031860027],"genre_scores_gemma":[0.99915093,0.0000063997354,0.000021581416,0.00009788434,0.00002078932,0.000045666406,0.0005216262,0.000020690813,0.00011441514],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9981863,0.000443507,0.0005334796,0.00032892553,0.00026086744,0.0002469531],"domain_scores_gemma":[0.9988245,0.00007926142,0.00026691685,0.00051320205,0.00007431666,0.00024180589],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00017725707,0.00016334606,0.0007134773,0.00026580156,0.00010398699,0.0000018726046,0.00019894193,0.000078594014,0.0015875305],"category_scores_gemma":[0.000028785304,0.0001405301,0.000117095886,0.00011040972,0.0001529991,0.00002384779,0.00012580013,0.00020548145,0.0000022170404],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00031204944,0.003998563,0.9664283,0.000042378215,0.00017397021,0.010613691,0.0012325573,0.000033597164,0.016959695,0.000032392356,0.00007441337,0.000098420496],"study_design_scores_gemma":[0.003793914,0.008713601,0.9761972,0.000015340524,0.0009806707,0.00028736534,0.0065126936,0.000032407428,0.003250952,0.00004200366,0.00003707413,0.00013680563],"about_ca_topic_score_codex":0.19964051,"about_ca_topic_score_gemma":0.034433205,"teacher_disagreement_score":0.16520731,"about_ca_system_score_codex":0.00004149075,"about_ca_system_score_gemma":0.0001455373,"threshold_uncertainty_score":0.99932516},"labels":[],"label_agreement":null},{"id":"W4312140626","doi":"10.1016/j.humpath.2022.12.006","title":"Cathepsin protease expression in infiltrative soft tissue sarcomas: cathepsin-K correlates with infiltrative tumor growth and clinical outcomes","year":2022,"lang":"en","type":"article","venue":"Human Pathology","topic":"Protease and Inhibitor Mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":4,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Mount Sinai Hospital","funders":"National Cancer Institute; National Institutes of Health; Japan Society for the Promotion of Science; Yasuda Memorial Medical Foundation","keywords":"Cathepsin H; Immunohistochemistry; Cathepsin D; Cathepsin B; Pathology; Cathepsin L; Cathepsin; Biology; Cancer research; Medicine; Enzyme","score_opus":0.014747696969536064,"score_gpt":0.28780228063111424,"score_spread":0.2730545836615782,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4312140626","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9976215,0.0003854972,0.00040875247,0.0001144276,0.00011560887,0.00084216596,0.000057242,0.000025645313,0.0004291844],"genre_scores_gemma":[0.9976284,0.000017867216,0.00083591545,0.00061432685,0.000085212734,0.0004257318,0.00013441527,0.00003626726,0.00022189938],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99776614,0.00064946385,0.00042528505,0.0006582684,0.00015947717,0.00034134317],"domain_scores_gemma":[0.9992097,0.000054744156,0.00022386812,0.00034755273,0.000050942603,0.0001131636],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004167638,0.00027498568,0.00037911424,0.00010276632,0.000296066,0.000018798057,0.00021732919,0.00014764558,0.00006657448],"category_scores_gemma":[0.0001598339,0.00022721835,0.00006814992,0.00010051007,0.00030483634,0.000014116922,0.00033661147,0.00047867402,0.0000045355628],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003606777,0.00049837417,0.14380802,0.000020008798,0.00003588665,0.00048611718,0.0010365273,0.000007522721,0.8523061,0.0008929821,0.00027957544,0.00026819],"study_design_scores_gemma":[0.0044235005,0.009052664,0.046730373,0.00005792905,0.0000582058,0.0007549343,0.0016514037,0.000018314153,0.9301056,0.004662324,0.0016235982,0.0008611254],"about_ca_topic_score_codex":0.00004622933,"about_ca_topic_score_gemma":0.00008592325,"teacher_disagreement_score":0.097077645,"about_ca_system_score_codex":0.000021585833,"about_ca_system_score_gemma":0.00012704605,"threshold_uncertainty_score":0.9265695},"labels":[],"label_agreement":null},{"id":"W4312221469","doi":"10.1016/j.humpath.2022.12.013","title":"Characterization of protein S-(2-succino)-cysteine (2SC) succination as a biomarker for fumarate hydratase–deficient renal cell carcinoma","year":2022,"lang":"en","type":"article","venue":"Human Pathology","topic":"Renal cell carcinoma treatment","field":"Medicine","cited_by":32,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"Immunohistochemistry; Biomarker; Renal cell carcinoma; Pathology; Clear cell; Staining; Differential diagnosis; Receiver operating characteristic; Biology; Medicine; Internal medicine; Biochemistry","score_opus":0.027449362448328733,"score_gpt":0.26683007617412857,"score_spread":0.23938071372579983,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4312221469","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99428076,0.00021320322,0.00030887823,0.00028318388,0.00013636473,0.002538348,0.00028813462,0.00004861632,0.0019025123],"genre_scores_gemma":[0.9909563,0.0000018615883,0.00021304042,0.00013565096,0.00007073955,0.0011549499,0.0036896337,0.000051760915,0.0037260854],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99782914,0.00027313858,0.0006056526,0.00055193965,0.0003703941,0.00036976027],"domain_scores_gemma":[0.9986946,0.00003405126,0.00043995408,0.00051805645,0.00020790259,0.00010545111],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.000489117,0.0002581009,0.00049126503,0.0004131721,0.0002923394,0.000010233502,0.00014042818,0.00009998136,0.0006405743],"category_scores_gemma":[0.000030436422,0.00024782738,0.00017966064,0.00028644502,0.00008164433,0.000061098355,0.00013591911,0.00017341692,0.000025679357],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0009151057,0.0007079748,0.0021551389,0.00027641762,0.000025459403,0.00046131283,0.00049059733,0.0000082774795,0.9934459,0.0007163096,0.00016507306,0.00063244224],"study_design_scores_gemma":[0.0067553055,0.009779045,0.15373045,0.000035134824,0.00024902864,0.00069221243,0.00016881271,0.0004257549,0.82413745,0.00023510391,0.00347931,0.00031239694],"about_ca_topic_score_codex":0.000049547638,"about_ca_topic_score_gemma":0.000007407681,"teacher_disagreement_score":0.16930845,"about_ca_system_score_codex":0.0002930727,"about_ca_system_score_gemma":0.00014163261,"threshold_uncertainty_score":0.9999974},"labels":[],"label_agreement":null},{"id":"W4323665532","doi":"10.1016/j.humpath.2023.03.004","title":"Merkel cell carcinoma: an update","year":2023,"lang":"en","type":"article","venue":"Human Pathology","topic":"Polyomavirus and related diseases","field":"Medicine","cited_by":14,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Queen's University; Nova Scotia Health Authority; Dalhousie University","funders":"","keywords":"Merkel cell carcinoma; Merkel cell polyomavirus; Dermatopathology; Merkel cell; Pathology; Cell of origin; Disease; Histopathology; Clinical significance; Carcinoma; Dermatology; Biology; Medicine; Cancer; Internal medicine","score_opus":0.030604663019267744,"score_gpt":0.3088952183699031,"score_spread":0.27829055535063535,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4323665532","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98423225,0.00055927865,0.0000039502725,0.00024815014,0.00017465217,0.000111592075,0.000018803283,0.00025132977,0.014399998],"genre_scores_gemma":[0.99363023,0.000043211934,0.000040885006,0.0006704686,0.00016646327,0.000013454839,0.00022546078,0.00002644029,0.0051833675],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9991502,0.00005511673,0.00015094216,0.00025336872,0.00009038633,0.00029995444],"domain_scores_gemma":[0.999405,0.000010721989,0.000036302597,0.00033438258,0.000025137471,0.00018844554],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.000095626594,0.00010666016,0.00019180209,0.00015442893,0.0001207614,0.000006199025,0.00007778109,0.00013318799,0.00048580454],"category_scores_gemma":[0.000010101704,0.00008800757,0.00007205233,0.0001499655,0.00010535782,0.000035572964,0.000048010246,0.00015343554,0.001698838],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00037723774,0.0020215376,0.22958249,0.00036387902,0.000093348375,0.043413542,0.002801962,0.000026671605,0.5822199,0.011908504,0.12029003,0.0069008744],"study_design_scores_gemma":[0.0033733326,0.0008979182,0.9664854,0.000016957212,0.00029002348,0.0004261643,0.0003043482,0.0001759922,0.007971973,0.0020207074,0.0177281,0.00030910564],"about_ca_topic_score_codex":0.000018531011,"about_ca_topic_score_gemma":0.000005745516,"teacher_disagreement_score":0.7369029,"about_ca_system_score_codex":0.0000133006415,"about_ca_system_score_gemma":0.00003843692,"threshold_uncertainty_score":0.99907845},"labels":[],"label_agreement":null},{"id":"W4361280329","doi":"10.1016/j.humpath.2023.03.014","title":"Dedifferentiated and undifferentiated melanomas: a practical approach to a challenging diagnosis","year":2023,"lang":"en","type":"article","venue":"Human Pathology","topic":"Cutaneous Melanoma Detection and Management","field":"Medicine","cited_by":17,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"Immunohistochemistry; Differential diagnosis; Melanoma; Lineage (genetic); Pathology; Medical diagnosis; Phenotype; Melanoma diagnosis; Anatomical pathology; Medicine; Biology; Cancer research; Gene; Genetics","score_opus":0.06516607930196358,"score_gpt":0.3254482903408071,"score_spread":0.2602822110388435,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4361280329","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9904317,0.000042384585,0.0013343265,0.001273299,0.00016547205,0.0005608955,0.0000034260752,0.0004841525,0.0057043144],"genre_scores_gemma":[0.99693334,0.000074582356,0.0004018223,0.00043364472,0.000089104724,0.00024058769,0.00007596399,0.00003250684,0.0017184283],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99878025,0.00008559618,0.00021361632,0.00042537076,0.00014782963,0.00034736434],"domain_scores_gemma":[0.99941367,0.000056814995,0.000044667268,0.00024827465,0.000034717174,0.00020183894],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001573016,0.0001620404,0.0003086716,0.00044644874,0.00015542387,0.000026614158,0.000046524063,0.00011671122,0.00016618379],"category_scores_gemma":[0.00009850562,0.00014729817,0.000054879445,0.0003087432,0.00005275839,0.00002444224,0.00015590574,0.00018884196,0.00023148883],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0029394506,0.012503867,0.25159177,0.004462647,0.0041166632,0.045955062,0.039660525,0.000104447485,0.24015857,0.17346565,0.14550139,0.07953996],"study_design_scores_gemma":[0.005654511,0.0024970071,0.9475816,0.0001622654,0.0007863851,0.0066504423,0.0030768046,0.0035802238,0.0017926459,0.0014338206,0.025908161,0.00087611785],"about_ca_topic_score_codex":0.000010679396,"about_ca_topic_score_gemma":0.000017394243,"teacher_disagreement_score":0.69598985,"about_ca_system_score_codex":0.000036834565,"about_ca_system_score_gemma":0.000010021608,"threshold_uncertainty_score":0.60066444},"labels":[],"label_agreement":null},{"id":"W4378549567","doi":"10.1016/j.humpath.2023.05.008","title":"Colorectal dysplasia in chronic inflammatory bowel disease: a contemporary consensus classification and interobserver study","year":2023,"lang":"en","type":"article","venue":"Human Pathology","topic":"Inflammatory Bowel Disease","field":"Biochemistry, Genetics and Molecular Biology","cited_by":31,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Mount Sinai Hospital","funders":"Friedrich-Alexander-Universität Erlangen-Nürnberg","keywords":"Dysplasia; Grading (engineering); Medicine; Inflammatory bowel disease; Gastroenterology; Pathology; Internal medicine; Disease; Biology","score_opus":0.027491507250540063,"score_gpt":0.28425429412439474,"score_spread":0.2567627868738547,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4378549567","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99852425,0.00023856979,0.0000022589136,0.000059133992,0.000110735185,0.0006945978,0.00002982338,0.00006398453,0.0002766326],"genre_scores_gemma":[0.99901533,0.00001875195,0.0000038244857,0.00006802305,0.00010389683,0.00023199493,0.00024055144,0.000033561188,0.00028408857],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9983809,0.00034370084,0.00033231525,0.0005383824,0.0000952324,0.00030944188],"domain_scores_gemma":[0.99932706,0.000017386781,0.00010234585,0.0003798513,0.000046574303,0.00012675335],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003945446,0.00019127759,0.00015578775,0.0001499781,0.00009774307,0.000019461302,0.00015216357,0.0001421209,0.0000170358],"category_scores_gemma":[0.00008599842,0.00020875121,0.000048225145,0.00008007454,0.00026652575,0.000005567855,0.00021387154,0.00014446658,0.00005549571],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00046051355,0.000119107346,0.8783198,0.00006813223,0.000032452008,0.0030095773,0.0003587767,0.00002812901,0.11568859,0.00045233438,0.0013982416,0.00006432669],"study_design_scores_gemma":[0.0018119222,0.00029222493,0.99619055,0.00001602985,0.000014395932,0.000017095248,0.0004911188,0.00024863778,0.0001588604,0.00013907305,0.0004146995,0.00020536884],"about_ca_topic_score_codex":0.000004710852,"about_ca_topic_score_gemma":0.00041590258,"teacher_disagreement_score":0.117870755,"about_ca_system_score_codex":0.00006100459,"about_ca_system_score_gemma":0.0002452097,"threshold_uncertainty_score":0.85126275},"labels":[],"label_agreement":null},{"id":"W4380149383","doi":"10.1016/j.humpath.2023.06.001","title":"Primary cutaneous T-cell lymphoma: a review of the most common entities with focus on recent updates","year":2023,"lang":"en","type":"review","venue":"Human Pathology","topic":"Cutaneous lymphoproliferative disorders research","field":"Medicine","cited_by":14,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Royal Jubilee Hospital; University of British Columbia","funders":"","keywords":"Lymphomatoid papulosis; Mycosis fungoides; Lymphoproliferative disorders; Cutaneous lymphoma; Medicine; Lymphoma; CD30; Anaplastic large-cell lymphoma; Pathology; Dermatology; Cutaneous T-cell lymphoma","score_opus":0.058755170387442476,"score_gpt":0.3584189312597293,"score_spread":0.2996637608722868,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4380149383","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00033762626,0.9765338,4.776781e-7,0.0003614096,0.0001265209,0.0036064524,0.00018743146,0.00009008475,0.01875622],"genre_scores_gemma":[0.000035775724,0.9899288,0.00002112943,0.0009473411,0.00009471165,0.0004220639,0.00064348016,0.00019000735,0.007716738],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9958563,0.0009510029,0.0010729266,0.0007429104,0.0007901313,0.0005867322],"domain_scores_gemma":[0.99690974,0.00041885884,0.0006960702,0.0015287637,0.00032645877,0.00012011853],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0004425314,0.0006514766,0.003449291,0.0003394731,0.00020866693,0.000019284818,0.00063148886,0.00036759104,0.00039597895],"category_scores_gemma":[0.00022399626,0.00037822407,0.0005285071,0.00083566783,0.0007227141,0.000018512652,0.00039428813,0.0006187746,0.00028517089],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00017480082,0.0013208566,0.000107035965,0.4398891,0.00047147356,0.007441627,0.00020931795,1.8462153e-7,0.000021711348,0.0006436097,0.018904496,0.5308158],"study_design_scores_gemma":[0.001183371,0.0016951773,0.000018335339,0.16140845,0.0017029427,0.020066181,0.000052599305,3.2094297e-7,0.000037418995,0.00022243802,0.8131671,0.00044567915],"about_ca_topic_score_codex":0.000042197687,"about_ca_topic_score_gemma":0.00011950518,"teacher_disagreement_score":0.7942626,"about_ca_system_score_codex":0.000516433,"about_ca_system_score_gemma":0.001231413,"threshold_uncertainty_score":0.99986696},"labels":[],"label_agreement":null},{"id":"W4380883421","doi":"10.1016/j.humpath.2023.06.002","title":"Metastatic solid tumors to the testis: a clinicopathologic evaluation of 157 cases from an international collaboration","year":2023,"lang":"en","type":"article","venue":"Human Pathology","topic":"Testicular diseases and treatments","field":"Medicine","cited_by":7,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; University of Calgary","funders":"","keywords":"Medicine; Genitourinary system; Pathology; Metastasis; Orchiectomy; Adenocarcinoma; Nodule (geology); Disease; Internal medicine; Cancer; Biology","score_opus":0.139676183341192,"score_gpt":0.4643812962929936,"score_spread":0.3247051129518016,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4380883421","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9977867,0.00014110749,0.000047616948,0.00071712455,0.00021260469,0.0006276425,0.0002583552,0.00007033573,0.00013849481],"genre_scores_gemma":[0.9976341,0.000008471444,0.00053512666,0.00038061777,0.00010732237,0.00018263677,0.0010888313,0.00001319069,0.000049662747],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99868065,0.00029677484,0.00029998098,0.0002631426,0.0003322686,0.00012718806],"domain_scores_gemma":[0.99893194,0.00014791096,0.00014840145,0.0003372728,0.00035980367,0.000074680545],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00055565743,0.00009952237,0.00021924726,0.00013311821,0.000078846504,0.000014381472,0.0001018663,0.000034303193,0.00024360199],"category_scores_gemma":[0.0014704171,0.00006960303,0.00005188886,0.00026035024,0.00006528821,0.00006123516,0.0000454329,0.00005534719,0.0001548004],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00061454653,0.0031806196,0.87413317,0.000065395616,0.0005649812,0.009582862,0.007297515,0.004429133,0.037855674,0.0021723136,0.0029633213,0.05714047],"study_design_scores_gemma":[0.0014043265,0.0011033603,0.9906421,0.00003803211,0.0006638585,0.00017015573,0.00071603525,0.0024716987,0.00031631536,0.0023443259,0.00006154676,0.0000682935],"about_ca_topic_score_codex":0.000051040177,"about_ca_topic_score_gemma":0.00016267318,"teacher_disagreement_score":0.11650888,"about_ca_system_score_codex":0.000050339153,"about_ca_system_score_gemma":0.00013206791,"threshold_uncertainty_score":0.28383294},"labels":[],"label_agreement":null},{"id":"W4385383441","doi":"10.1016/j.humpath.2023.07.009","title":"Unraveling the molecular landscape: a comparative analysis of PI3K and MAPK signaling pathways in plasmablastic lymphoma and diffuse large B-cell lymphoma with therapeutic implications","year":2023,"lang":"en","type":"article","venue":"Human Pathology","topic":"Lymphoma Diagnosis and Treatment","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Provincial Laboratory of Public Health; University of Calgary","funders":"Alberta Cancer Foundation; Alberta Precision Laboratories","keywords":"MAPK/ERK pathway; Cancer research; PI3K/AKT/mTOR pathway; Lymphoma; Idelalisib; Biology; Diffuse large B-cell lymphoma; Signal transduction; Protein kinase B; PTEN; Plasmablastic lymphoma; Kinase; Targeted therapy; Immunology; Cancer; Cell biology; Genetics; Ibrutinib; Leukemia; Chronic lymphocytic leukemia","score_opus":0.030972108966167426,"score_gpt":0.2842195070566972,"score_spread":0.25324739809052976,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4385383441","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9979969,0.0010378822,0.00017175781,0.00013043573,0.000008163552,0.00031898127,0.00004696847,0.000032087224,0.0002568122],"genre_scores_gemma":[0.9993505,0.000116936026,0.00008915371,0.00018386997,0.000007938323,0.00012433622,0.00009543547,0.000013740321,0.000018109959],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9989298,0.00010927951,0.0002855421,0.00030051914,0.00011299216,0.0002618404],"domain_scores_gemma":[0.9991877,0.00028920022,0.00012662566,0.00027980836,0.000051247138,0.00006542709],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00018627092,0.00017455682,0.0005112851,0.0003969064,0.00013878717,0.000017575647,0.00006298339,0.000070625625,0.000009172578],"category_scores_gemma":[0.000008361388,0.000111934714,0.00006572104,0.0007172815,0.00014542798,0.000022721477,0.000059582915,0.0000420084,0.000004112886],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00026343114,0.0037625027,0.8938608,0.00012125134,0.0015768025,0.0008910526,0.017273068,0.00035199363,0.06575814,0.014088666,0.000019289133,0.0020330176],"study_design_scores_gemma":[0.011198361,0.00045110966,0.9768212,0.00004758014,0.0014958879,0.00009687803,0.0021851994,0.0036000893,0.0036483903,0.00029752002,0.000030290757,0.00012750652],"about_ca_topic_score_codex":0.00002722613,"about_ca_topic_score_gemma":0.00016829306,"teacher_disagreement_score":0.0829604,"about_ca_system_score_codex":0.000038793944,"about_ca_system_score_gemma":0.00004550524,"threshold_uncertainty_score":0.4564565},"labels":[],"label_agreement":null},{"id":"W4385494722","doi":"10.1016/j.humpath.2023.07.007","title":"Hepatic graft-versus-host disease: what we know, when to biopsy, and how to diagnose","year":2023,"lang":"en","type":"article","venue":"Human Pathology","topic":"Hematopoietic Stem Cell Transplantation","field":"Medicine","cited_by":11,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University","funders":"","keywords":"Medicine; Graft-versus-host disease; Liver biopsy; Biopsy; Liver transplantation; Bile duct; Disease; Transplantation; Liver disease; Pathology; Cholestasis; Gastroenterology; Internal medicine","score_opus":0.038351010130438276,"score_gpt":0.31198572828643695,"score_spread":0.27363471815599866,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4385494722","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9749769,0.00077348447,0.00025411687,0.02229391,0.0004860394,0.0007717187,0.000027449074,0.000203116,0.00021328751],"genre_scores_gemma":[0.993597,0.0013510988,0.0006944117,0.001051797,0.00017682635,0.00023793205,0.00013582813,0.00005115933,0.0027039528],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9986804,0.00009622215,0.00018292325,0.0004618762,0.00020333713,0.0003752144],"domain_scores_gemma":[0.9987959,0.00023807188,0.00003616053,0.00039639548,0.000053249216,0.00048016926],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00022029808,0.00018561476,0.00032204855,0.00032115562,0.00010260667,0.000056663877,0.000094440846,0.00009429306,0.00020494837],"category_scores_gemma":[0.00015419078,0.00017638739,0.000053095224,0.00026957702,0.00007981828,0.000104577775,0.000071180155,0.000106035506,0.00075222866],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0033528546,0.0009856501,0.28837854,0.0060884836,0.00039974682,0.047900993,0.08825083,0.0000169465,0.40174493,0.010860605,0.09526261,0.056757815],"study_design_scores_gemma":[0.008539617,0.0026444856,0.9188713,0.0030178626,0.0008025214,0.0007006618,0.004847399,0.00009925082,0.005484277,0.0019183449,0.051986102,0.001088219],"about_ca_topic_score_codex":0.000007982248,"about_ca_topic_score_gemma":0.00006965932,"teacher_disagreement_score":0.63049275,"about_ca_system_score_codex":0.000037606256,"about_ca_system_score_gemma":0.000030243651,"threshold_uncertainty_score":0.96686286},"labels":[],"label_agreement":null},{"id":"W4387142786","doi":"10.1016/j.humpath.2023.09.006","title":"Uroplakin-IIIb as a novel immunohistochemical marker for mesothelioma","year":2023,"lang":"en","type":"letter","venue":"Human Pathology","topic":"Occupational and environmental lung diseases","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"BC Cancer Agency; Vancouver General Hospital; University of British Columbia","funders":"University of British Columbia; Faculty of Medicine, University of British Columbia","keywords":"Mesothelioma; Pathology; Serous fluid; Immunohistochemistry; Tissue microarray; Medicine; Serous carcinoma; BAP1; Mesothelin; Stain; Calretinin; Differential diagnosis; Staining; Cancer; Ovarian cancer; Internal medicine","score_opus":0.03595331844186596,"score_gpt":0.32260796425397964,"score_spread":0.2866546458121137,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4387142786","genre_codex":"commentary","genre_gemma":"commentary","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"commentary","genre_consensus":"commentary","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.4379427,0.0017651975,0.00032672664,0.5101765,0.0029800842,0.0049102576,0.0045536784,0.0010779103,0.036266934],"genre_scores_gemma":[0.015376633,0.000028979077,0.0009758596,0.83963495,0.0066189873,0.0009827289,0.016240966,0.00034360052,0.1197973],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99838275,0.000029898269,0.00033580017,0.00056762056,0.00027655668,0.0004073513],"domain_scores_gemma":[0.9991652,0.00015407,0.00012930574,0.00044179952,0.00003320984,0.000076447825],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00008700249,0.00031897228,0.00050117384,0.00019038463,0.0001163693,0.00001036211,0.00016107883,0.00069867517,0.0011488374],"category_scores_gemma":[0.00008983716,0.00029186424,0.00033976242,0.00006695465,0.0002867826,0.000020174873,0.00010568195,0.00061320135,0.0012106496],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00028651624,0.00014978008,0.001061498,0.00034027584,0.00012345104,0.002057883,0.000027879338,1.6904539e-7,0.04110815,0.00017920145,0.9545626,0.00010260191],"study_design_scores_gemma":[0.0019705521,0.0006006359,0.047349468,0.00013769469,0.0004962089,0.0011006191,0.00000989312,0.0000057399297,0.00027397042,0.0014797151,0.9461685,0.00040702635],"about_ca_topic_score_codex":0.00001014086,"about_ca_topic_score_gemma":0.0000010883674,"teacher_disagreement_score":0.4225661,"about_ca_system_score_codex":0.0001431042,"about_ca_system_score_gemma":0.000059827827,"threshold_uncertainty_score":0.9999533},"labels":[],"label_agreement":null},{"id":"W4387341765","doi":"10.1016/j.humpath.2023.09.009","title":"Primary cutaneous T-cell lymphoma: a review of the most common entities with focus on recent updates","year":2023,"lang":"en","type":"review","venue":"Human Pathology","topic":"Cutaneous lymphoproliferative disorders research","field":"Medicine","cited_by":10,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Royal Jubilee Hospital; University of British Columbia","funders":"","keywords":"Lymphomatoid papulosis; Mycosis fungoides; Lymphoproliferative disorders; Cutaneous lymphoma; Medicine; Lymphoma; Anaplastic large-cell lymphoma; CD30; Pathology; Dermatology","score_opus":0.058755170387442476,"score_gpt":0.3584189312597293,"score_spread":0.2996637608722868,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4387341765","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00033762626,0.9765338,4.776781e-7,0.0003614096,0.0001265209,0.0036064524,0.00018743146,0.00009008475,0.01875622],"genre_scores_gemma":[0.000035775724,0.9899288,0.00002112943,0.0009473411,0.00009471165,0.0004220639,0.00064348016,0.00019000735,0.007716738],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9958563,0.0009510029,0.0010729266,0.0007429104,0.0007901313,0.0005867322],"domain_scores_gemma":[0.99690974,0.00041885884,0.0006960702,0.0015287637,0.00032645877,0.00012011853],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0004425314,0.0006514766,0.003449291,0.0003394731,0.00020866693,0.000019284818,0.00063148886,0.00036759104,0.00039597895],"category_scores_gemma":[0.00022399626,0.00037822407,0.0005285071,0.00083566783,0.0007227141,0.000018512652,0.00039428813,0.0006187746,0.00028517089],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00017480082,0.0013208566,0.000107035965,0.4398891,0.00047147356,0.007441627,0.00020931795,1.8462153e-7,0.000021711348,0.0006436097,0.018904496,0.5308158],"study_design_scores_gemma":[0.001183371,0.0016951773,0.000018335339,0.16140845,0.0017029427,0.020066181,0.000052599305,3.2094297e-7,0.000037418995,0.00022243802,0.8131671,0.00044567915],"about_ca_topic_score_codex":0.000042197687,"about_ca_topic_score_gemma":0.00011950518,"teacher_disagreement_score":0.7942626,"about_ca_system_score_codex":0.000516433,"about_ca_system_score_gemma":0.001231413,"threshold_uncertainty_score":0.99986696},"labels":[],"label_agreement":null},{"id":"W4388835478","doi":"10.1016/j.humpath.2023.11.006","title":"CSF1 expression in xanthogranulomatous epithelial tumor/keratin-positive giant cell-rich tumor","year":2023,"lang":"en","type":"article","venue":"Human Pathology","topic":"Musculoskeletal synovial abnormalities and treatments","field":"Medicine","cited_by":15,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Mount Sinai Hospital","funders":"Washington University School of Medicine in St. Louis","keywords":"Chromogenic in situ hybridization; CISH; Pathology; Keratin; Paracrine signalling; Giant cell; In situ hybridization; Biology; Cancer research; Medicine; Gene expression; Gene; Receptor","score_opus":0.013947299908680565,"score_gpt":0.27856856685209874,"score_spread":0.2646212669434182,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4388835478","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.988063,0.00009947069,0.000022582099,0.00016599703,0.000256093,0.0005640656,0.00006767697,0.00017020715,0.010590917],"genre_scores_gemma":[0.9968103,0.000020514974,0.00028707532,0.00041022812,0.00019940926,0.00013484241,0.00023868748,0.00004451046,0.001854436],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9980947,0.00018456239,0.00043233784,0.0004715759,0.00023092075,0.0005859193],"domain_scores_gemma":[0.9992846,0.00007060214,0.0001144003,0.00033209135,0.00004871875,0.00014958691],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00022428128,0.000264986,0.00051060074,0.000283757,0.00019930876,0.000017529781,0.00010652403,0.00010263253,0.00044881174],"category_scores_gemma":[0.000034233577,0.00021519588,0.00013684297,0.00031072856,0.00013258973,0.00006620354,0.00013207401,0.0002636007,0.00060981826],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00051379,0.0015961234,0.100982554,0.000424565,0.00005899438,0.06517263,0.00446363,0.000017626748,0.8188395,0.0015384243,0.003197064,0.0031950984],"study_design_scores_gemma":[0.006890616,0.0018201706,0.8791826,0.0003278049,0.000094515744,0.001295077,0.0009944823,0.00008901029,0.106793866,0.0011924063,0.000829937,0.0004895597],"about_ca_topic_score_codex":0.000113262126,"about_ca_topic_score_gemma":0.000064847074,"teacher_disagreement_score":0.77820003,"about_ca_system_score_codex":0.00007517561,"about_ca_system_score_gemma":0.000047131656,"threshold_uncertainty_score":0.8775433},"labels":[],"label_agreement":null},{"id":"W4390843822","doi":"10.1016/j.humpath.2024.01.003","title":"TERT promoter mutations in atypical melanocytic lesions: A series of seven cases with adverse melanoma-specific outcome","year":2024,"lang":"en","type":"article","venue":"Human Pathology","topic":"Cutaneous Melanoma Detection and Management","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"BC Cancer Agency; McGill University Health Centre; Vancouver General Hospital; University of British Columbia","funders":"","keywords":"Melanoma; Telomerase reverse transcriptase; Melanocytic nevus; Telomerase; Medicine; Biopsy; Nevus; Telomere; Mutation; Molecular diagnostics; Pathology; Biology; Cancer research; Gene; Bioinformatics; Genetics","score_opus":0.04514259405533275,"score_gpt":0.30450700437290207,"score_spread":0.2593644103175693,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4390843822","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9964885,0.00022210502,0.00018205105,0.0004989545,0.00016048682,0.00050179835,0.000014021861,0.00011880373,0.0018132695],"genre_scores_gemma":[0.9943939,0.00001548689,0.0006449887,0.00008095347,0.000055012075,0.00006799611,0.000041458574,0.000025085934,0.0046751453],"study_design_codex":"case_report","study_design_gemma":"observational","domain_scores_codex":[0.99895954,0.00006803069,0.0003562088,0.00029846665,0.00012796339,0.00018978113],"domain_scores_gemma":[0.999567,0.000057834957,0.000044825556,0.00024022533,0.000033229342,0.00005691945],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000120748926,0.00014000134,0.000310144,0.0003674019,0.00005022859,0.000010266299,0.000054744036,0.00008425124,0.00041493165],"category_scores_gemma":[0.0000258736,0.00010723393,0.00006981879,0.00020937137,0.00017327223,0.0000556221,0.00004285311,0.00019478309,0.00008940233],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.007008635,0.0033316722,0.14711118,0.0044736834,0.00096018385,0.55518675,0.032557096,0.00021273189,0.13707253,0.07390586,0.0051970533,0.032982633],"study_design_scores_gemma":[0.00842511,0.013253909,0.7233509,0.0017560892,0.0009873947,0.16604315,0.00847797,0.00033396835,0.009350308,0.0034645617,0.06326682,0.0012898556],"about_ca_topic_score_codex":0.000017613214,"about_ca_topic_score_gemma":0.00027680473,"teacher_disagreement_score":0.5762397,"about_ca_system_score_codex":0.000086147804,"about_ca_system_score_gemma":0.000039873998,"threshold_uncertainty_score":0.45432106},"labels":[],"label_agreement":null},{"id":"W4391597902","doi":"10.1016/j.humpath.2024.02.003","title":"Spinal calcifying pseudoneoplasm of the neuraxis (CAPNON) associated with facet joint pathologies: CAPNON diagnostic and pathogenic insights","year":2024,"lang":"en","type":"article","venue":"Human Pathology","topic":"Neurofibromatosis and Schwannoma Cases","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"BC Cancer Agency; McMaster University","funders":"McMaster University","keywords":"Pathology; Pathogenesis; Facet joint; Pathological; Medicine; Calcification; Anatomy; Lesion; Spinal cord; Lumbar","score_opus":0.03823250917239951,"score_gpt":0.27258445819063076,"score_spread":0.23435194901823125,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4391597902","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99533606,0.002980258,0.00002642244,0.00036304255,0.00025656284,0.000472169,0.000042647433,0.00014305134,0.00037980254],"genre_scores_gemma":[0.99920225,0.00010556829,0.000068042886,0.00025493617,0.000059257858,0.000047607682,0.000018711966,0.00004612067,0.00019751531],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9981282,0.0002842882,0.0004462637,0.00053826085,0.00025597063,0.00034706487],"domain_scores_gemma":[0.9989644,0.00024259224,0.00015383831,0.0004597717,0.00007994348,0.00009945504],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00022805008,0.0002771094,0.0005754062,0.00017479509,0.00019669966,0.00003880639,0.00011983003,0.00015592099,0.0000338693],"category_scores_gemma":[0.00059611176,0.00016764211,0.0001487862,0.00028513174,0.00049438793,0.000089643036,0.00016240698,0.0004496173,0.0000106388325],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014033036,0.00046742026,0.08496518,0.0010550396,0.00021495731,0.029348273,0.0038606944,0.000011253005,0.8715582,0.004959224,0.0011852732,0.0022341837],"study_design_scores_gemma":[0.0010838343,0.0026291304,0.97631586,0.0011195857,0.0003345,0.0072057215,0.0002711291,0.000072333816,0.010038479,0.0005291617,0.00014622239,0.00025405356],"about_ca_topic_score_codex":0.000015492667,"about_ca_topic_score_gemma":0.000047376892,"teacher_disagreement_score":0.8913507,"about_ca_system_score_codex":0.000040791634,"about_ca_system_score_gemma":0.00009465285,"threshold_uncertainty_score":0.6836247},"labels":[],"label_agreement":null},{"id":"W4394680863","doi":"10.1016/j.humpath.2024.04.002","title":"Long term evaluation of optimized Gleason grading in a large cohort of men with prostate cancer in Canada","year":2024,"lang":"en","type":"article","venue":"Human Pathology","topic":"Prostate Cancer Diagnosis and Treatment","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Université de Montréal; Université Laval; McGill University; Université du Québec à Montréal; Université de Sherbrooke; McGill University Health Centre","funders":"Fonds de Recherche du Québec - Santé; McGill University Health Centre; Canadian Institutes of Health Research; Cancer Research Society; McGill University","keywords":"Medicine; Prostate cancer; Prostatectomy; Hazard ratio; Concordance; Cohort; Urology; Prospective cohort study; Proportional hazards model; Confidence interval; Prostate; Metastasis; Internal medicine; Oncology; Genitourinary system; Cancer; Gynecology","score_opus":0.02343797389625666,"score_gpt":0.3239936443279918,"score_spread":0.30055567043173514,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4394680863","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9933514,0.0049473774,0.0000035820249,0.00015034397,0.00004724492,0.00094381085,0.00005465276,0.0000059897434,0.00049560395],"genre_scores_gemma":[0.9989389,0.0004040674,0.000041284162,0.000024297953,0.000010640913,0.00047632173,0.000052882864,0.000013515612,0.000038054535],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9990442,0.00007958458,0.0002636243,0.0002161015,0.00021960656,0.00017688192],"domain_scores_gemma":[0.99966973,0.00002686753,0.00007202154,0.0001259258,0.000074742005,0.00003069814],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00041983693,0.00009160871,0.00034169285,0.00013704305,0.000010432746,0.0000025650431,0.000028677881,0.00002999006,0.00013683998],"category_scores_gemma":[0.000011479074,0.000070812464,0.000020476205,0.00016381245,0.00003297602,0.00003215761,0.000014203571,0.00009091544,2.7491876e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00017766187,0.000105431354,0.9920081,0.00024254342,0.00006590432,0.0006465438,0.0011533159,0.0003307521,0.0009856955,0.00006358941,0.000059976373,0.0041604913],"study_design_scores_gemma":[0.00426705,0.000230301,0.98958486,0.0010002393,0.00019546678,0.000021311242,0.00013724441,0.0014899777,0.0029641313,0.000040973686,0.0000073327556,0.00006110727],"about_ca_topic_score_codex":0.19678792,"about_ca_topic_score_gemma":0.75349146,"teacher_disagreement_score":0.5567035,"about_ca_system_score_codex":0.0010286852,"about_ca_system_score_gemma":0.0010881741,"threshold_uncertainty_score":0.8085607},"labels":[],"label_agreement":null},{"id":"W4399590004","doi":"10.1016/j.humpath.2024.06.007","title":"Steatohepatitic hepatocellular Carcinoma:A new approach to classifying morphological subtypes of hepatocellular carcinoma","year":2024,"lang":"en","type":"article","venue":"Human Pathology","topic":"Hepatocellular Carcinoma Treatment and Prognosis","field":"Medicine","cited_by":5,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hospital for Sick Children","funders":"National Cancer Institute; National Research Foundation of Korea; Ministry of Science, ICT and Future Planning","keywords":"Hepatocellular carcinoma; Carcinoma; Medicine; Pathology; Internal medicine","score_opus":0.10886173936981959,"score_gpt":0.2837571818733346,"score_spread":0.17489544250351502,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4399590004","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9786924,0.0049970397,0.0021560902,0.00038282317,0.0003180349,0.0015209473,0.000036898047,0.00033537147,0.011560382],"genre_scores_gemma":[0.99100745,0.000033345572,0.0034051533,0.00028500578,0.0004348378,0.00019371348,0.00033072341,0.00013479189,0.004174975],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99598783,0.0003125063,0.0009273911,0.0013413845,0.00053367397,0.0008972065],"domain_scores_gemma":[0.9978796,0.00013416409,0.00012682597,0.0010208862,0.00015383327,0.0006846674],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00058099953,0.00062800746,0.0012368289,0.00073671644,0.00018406242,0.000062557076,0.00035629165,0.00054706563,0.0008017632],"category_scores_gemma":[0.0000857973,0.0005435937,0.00059060816,0.0007650968,0.0002892349,0.00011971739,0.00022492824,0.0006095949,0.00063648185],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011576624,0.0004306328,0.9063042,0.0006482713,0.00013456606,0.011165201,0.0013494666,0.0000014243516,0.07128684,0.005231452,0.0023313449,0.0010008845],"study_design_scores_gemma":[0.009071904,0.00841305,0.67168313,0.0009806654,0.004638076,0.013473515,0.0011037982,0.053264372,0.19939,0.0046185376,0.029948713,0.0034142304],"about_ca_topic_score_codex":0.00033490465,"about_ca_topic_score_gemma":0.000006601472,"teacher_disagreement_score":0.234621,"about_ca_system_score_codex":0.00022058947,"about_ca_system_score_gemma":0.00037056353,"threshold_uncertainty_score":0.99970156},"labels":[],"label_agreement":null},{"id":"W4402046452","doi":"10.1016/j.humpath.2024.105652","title":"Fluorescence in-situ hybridization assessment of spindle cell-rich testicular sex cord stromal tumors demonstrates multiple chromosomal gains across histologic subtypes","year":2024,"lang":"en","type":"article","venue":"Human Pathology","topic":"Testicular diseases and treatments","field":"Medicine","cited_by":6,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Calgary Laboratory Services; University of Calgary","funders":"","keywords":"Biology; Fluorescence in situ hybridization; Comparative genomic hybridization; Stromal cell; In situ hybridization; Chromosome; Karyotype; Pathology; Genetics; Gene; Cancer research; Gene expression; Medicine","score_opus":0.02749751098400335,"score_gpt":0.33863190535082016,"score_spread":0.31113439436681684,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4402046452","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9968062,0.0016617542,0.00031192164,0.000032032895,0.00011159633,0.00041641045,0.000047602807,0.00009267735,0.0005197927],"genre_scores_gemma":[0.9967331,0.000022876351,0.0027201793,0.000026617045,0.00004723623,0.000040635314,0.00026706635,0.000028101002,0.00011417356],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9984911,0.0000913044,0.00038364285,0.00047787823,0.00018553274,0.00037054825],"domain_scores_gemma":[0.9993393,0.00009250522,0.00011151806,0.00027973324,0.00006910439,0.000107831605],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00011819886,0.00021967666,0.0004105345,0.00012330715,0.00009791492,0.00002147619,0.00009620403,0.00010661904,0.000067823945],"category_scores_gemma":[0.000082938524,0.00019168324,0.000099368444,0.00021965528,0.000250131,0.00006249956,0.00006429897,0.00019198081,0.000022147775],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000024522267,0.00074525195,0.8132585,0.00025662396,0.000030458812,0.0064506372,0.00015367262,0.00006484634,0.17801309,0.00033045484,0.000020302887,0.0006516109],"study_design_scores_gemma":[0.0012425764,0.0013311098,0.9807523,0.00018609261,0.00015594145,0.00061926094,0.00018159558,0.001827154,0.01344082,0.000090331625,0.000013037389,0.00015979205],"about_ca_topic_score_codex":0.00004820494,"about_ca_topic_score_gemma":0.000074122356,"teacher_disagreement_score":0.16749376,"about_ca_system_score_codex":0.00015312419,"about_ca_system_score_gemma":0.00023149866,"threshold_uncertainty_score":0.78166157},"labels":[],"label_agreement":null},{"id":"W4406165921","doi":"10.1016/j.humpath.2025.105715","title":"Indolent clonal lymphoid disorders","year":2025,"lang":"en","type":"review","venue":"Human Pathology","topic":"Lymphoma Diagnosis and Treatment","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; University Health Network","funders":"","keywords":"Lymphoma; Lymphoid hyperplasia; Disease; Somatic evolution in cancer; Hematopathology; Pathology; Medicine; Lymphoproliferative disorders; Lymphatic system; Immunology; Biology; Cancer; Internal medicine; Cytogenetics; Genetics","score_opus":0.03812767733117936,"score_gpt":0.38420060480950263,"score_spread":0.3460729274783233,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4406165921","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00010060662,0.97771347,0.0000029886473,0.0000757645,0.00038541193,0.0009838836,0.00006345781,0.0000767218,0.020597726],"genre_scores_gemma":[0.00011860988,0.9939723,0.00006735347,0.00032934494,0.00020820517,0.000684972,0.00086015847,0.000038738246,0.0037202886],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99817073,0.00016154934,0.00054295367,0.0006046145,0.0001597541,0.00036037204],"domain_scores_gemma":[0.99892026,0.0001493214,0.00019625243,0.000589523,0.00002957061,0.00011506117],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0001089535,0.0004598808,0.0020439394,0.00033128366,0.00011198225,0.000012749972,0.00015520806,0.00046793875,0.00035504546],"category_scores_gemma":[0.000039750328,0.00033777763,0.000782732,0.00016905839,0.00012824245,0.000014014535,0.00014190398,0.00017441639,0.00026849026],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000006301097,0.00066911016,0.00087866804,0.011017425,0.00027117302,0.0009184475,0.000038232858,2.0752779e-8,1.6545111e-7,0.0024275973,0.004796953,0.9789759],"study_design_scores_gemma":[0.0014046667,0.00030737213,0.0007918938,0.00839092,0.002218004,0.0009037841,0.0000048452766,5.582993e-8,6.666157e-7,0.00018227084,0.98556596,0.00022957106],"about_ca_topic_score_codex":0.000013523815,"about_ca_topic_score_gemma":0.000029284885,"teacher_disagreement_score":0.980769,"about_ca_system_score_codex":0.00037466656,"about_ca_system_score_gemma":0.0005489621,"threshold_uncertainty_score":0.99990743},"labels":[],"label_agreement":null},{"id":"W4408749686","doi":"10.1016/j.humpath.2025.105763","title":"Histologic alterations are common in Monogenic Disease patients with ‘healthy’ endoscopy: Results from a GIPAD-GIPPI multicenter study","year":2025,"lang":"en","type":"article","venue":"Human Pathology","topic":"Inflammatory Bowel Disease","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University Hospital Foundation","funders":"","keywords":"Multicenter study; Medicine; Endoscopy; Disease; Pathology; Internal medicine; Gastroenterology","score_opus":0.011152796707457894,"score_gpt":0.2747879312747136,"score_spread":0.26363513456725574,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4408749686","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99783874,0.00016242031,0.0000427593,0.000115802555,0.00016501063,0.001008933,0.0004173252,0.000026610967,0.00022241214],"genre_scores_gemma":[0.9972041,0.000006038625,0.000107520784,0.0008547414,0.00004984009,0.00024349468,0.0013334992,0.00002084749,0.00017986527],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9979658,0.00045939288,0.00045819176,0.0006890343,0.000105055224,0.00032251002],"domain_scores_gemma":[0.99879783,0.000026717966,0.0001852529,0.00077192864,0.00009146781,0.00012680513],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013142238,0.00023204891,0.0002456625,0.00013276098,0.00018179997,0.00002034818,0.00024879992,0.00011937301,0.000020787467],"category_scores_gemma":[0.00012457468,0.00021692787,0.00005969958,0.000081603524,0.00012544179,0.000007264398,0.00016289852,0.00016613453,0.000017321941],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0035385182,0.0015450651,0.9920981,0.000016593614,0.00003975689,0.0006364287,0.0002863164,0.000079030855,0.0011490405,0.000034080407,0.0005121807,0.000064922206],"study_design_scores_gemma":[0.0076020774,0.0003519923,0.99106234,0.000026983447,0.000062710526,3.061706e-7,0.00014834279,0.000035637084,0.00007704531,0.00009632461,0.00034476313,0.0001914919],"about_ca_topic_score_codex":0.000060731927,"about_ca_topic_score_gemma":0.0039790203,"teacher_disagreement_score":0.004063559,"about_ca_system_score_codex":0.00007008029,"about_ca_system_score_gemma":0.000101366386,"threshold_uncertainty_score":0.8846062},"labels":[],"label_agreement":null},{"id":"W4410331291","doi":"10.1016/j.humpath.2025.105792","title":"CD47 expression in classic follicular lymphoma is associated with event-free survival","year":2025,"lang":"en","type":"article","venue":"Human Pathology","topic":"Phagocytosis and Immune Regulation","field":"Immunology and Microbiology","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Calgary Laboratory Services; University of Calgary","funders":"Foundation for the National Institutes of Health","keywords":"Follicular lymphoma; Lymphoma; Expression (computer science); Event (particle physics); Follicular phase; Medicine; Biology; Oncology; Immunology; Internal medicine; Computer science","score_opus":0.01435003780609077,"score_gpt":0.2558991419276104,"score_spread":0.24154910412151961,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4410331291","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.993803,0.0018563784,0.0003042849,0.00027584005,0.00041094897,0.00021951494,0.00001683284,0.000068224785,0.003044961],"genre_scores_gemma":[0.9936976,0.000020986603,0.000023994799,0.0002610811,0.0000114507875,0.000047917765,0.00020988421,0.000015966143,0.0057111396],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9982991,0.00052308664,0.00035859586,0.00039287945,0.00004256967,0.00038373083],"domain_scores_gemma":[0.9991432,0.000090400754,0.00015286455,0.0005428591,0.000058596175,0.0000120940795],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003459921,0.00019998677,0.00042614588,0.00023964934,0.0002098567,0.000011779406,0.00031248372,0.00043590105,0.00026466468],"category_scores_gemma":[0.000092819944,0.00016838426,0.000087005035,0.00025215204,0.000199766,0.00008510805,0.00017414616,0.00018720237,0.000058191366],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00017209764,0.000482831,0.033468153,0.000013327078,0.00012750666,0.000077843775,0.0005162456,0.000010584301,0.9520849,0.0034910906,0.007221391,0.0023340478],"study_design_scores_gemma":[0.009227426,0.00031019503,0.81206256,0.00025672265,0.00006463477,0.000042417672,0.00018203599,0.000014461282,0.16691005,0.0032457144,0.0073743905,0.00030937395],"about_ca_topic_score_codex":0.000025110388,"about_ca_topic_score_gemma":0.00018868927,"teacher_disagreement_score":0.78517485,"about_ca_system_score_codex":0.00012286588,"about_ca_system_score_gemma":0.00006718562,"threshold_uncertainty_score":0.68665105},"labels":[],"label_agreement":null},{"id":"W4411474731","doi":"10.1016/j.humpath.2025.105856","title":"Microinvasive carcinoma of the breast","year":2025,"lang":"en","type":"review","venue":"Human Pathology","topic":"Breast Cancer Treatment Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Sunnybrook Health Science Centre","funders":"National Cancer Institute; National Institutes of Health","keywords":"Medicine; Breast carcinoma; Carcinoma; Oncology; Biomarker; Immunohistochemistry; Breast cancer; Epidemiology; Pathology; Internal medicine; Cancer; Biology","score_opus":0.020366673729540475,"score_gpt":0.3068435641220156,"score_spread":0.2864768903924751,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4411474731","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00062431465,0.9965338,0.000003047027,0.000028002054,0.00025989706,0.00035707612,0.0004653109,0.0000052651108,0.0017232482],"genre_scores_gemma":[0.002297561,0.9956029,0.000025078036,0.000073146795,0.00019580693,0.00012718719,0.00026348676,0.000028356773,0.0013864913],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9987516,0.00021630336,0.0003271659,0.00043640303,0.000060050443,0.00020848087],"domain_scores_gemma":[0.9988305,0.000028150169,0.00028652287,0.00076444726,0.00006959569,0.000020800255],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000059579477,0.00031072774,0.0008605827,0.0000610572,0.00010868001,0.0000037599875,0.00043609593,0.00032402732,0.00001677124],"category_scores_gemma":[0.00002739377,0.00020548847,0.0005411363,0.00010876665,0.00030590044,5.340986e-7,0.000536508,0.00013915746,0.000007384754],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00004588701,0.00052000594,0.006193959,0.036155973,0.0019726092,0.0001617167,0.0002705075,4.5930534e-7,0.0021017925,0.0019810183,0.029040696,0.9215554],"study_design_scores_gemma":[0.0004960264,0.000103920924,0.0049472842,0.0036004419,0.0014931737,0.0016643688,0.00002675108,5.6537095e-9,0.000551624,0.00008896586,0.98663235,0.00039510915],"about_ca_topic_score_codex":0.000016039368,"about_ca_topic_score_gemma":0.00005928987,"teacher_disagreement_score":0.95759165,"about_ca_system_score_codex":0.000032299748,"about_ca_system_score_gemma":0.00026642028,"threshold_uncertainty_score":0.8379577},"labels":[],"label_agreement":null},{"id":"W4412630105","doi":"10.1016/j.humpath.2025.105877","title":"Impact of hormone sensitivity status on aberrant expression of CK7, CK20, CDX2, GATA3 and TTF1 in prostate cancer","year":2025,"lang":"en","type":"article","venue":"Human Pathology","topic":"Prostate Cancer Treatment and Research","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Centre Hospitalier de l’Université de Montréal","funders":"Fonds de Recherche du Québec - Santé","keywords":"CDX2; Prostate cancer; GATA3; Prostate; Medicine; Cancer; Internal medicine; Hormone; Oncology; Gynecology; Biology; Gene expression; Transcription factor; Gene; Genetics","score_opus":0.027227637739018817,"score_gpt":0.3851658501440123,"score_spread":0.35793821240499346,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4412630105","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99556375,0.0027224838,0.0000035449111,0.00016666573,0.00003367502,0.0004839348,0.000119911725,0.00001089784,0.0008951645],"genre_scores_gemma":[0.99738544,0.0018141711,0.00003703707,0.000034217257,0.000013725257,0.00003484303,0.0000446113,0.00001027046,0.0006257032],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.998931,0.00013700857,0.00024367093,0.00025836582,0.00012844072,0.00030150916],"domain_scores_gemma":[0.99945694,0.00007481634,0.000084268424,0.00023021935,0.00008370662,0.00007003033],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00023401227,0.00012962373,0.0004324943,0.00028215753,0.000036903264,0.0000029428584,0.000027801547,0.00007190022,0.000026077094],"category_scores_gemma":[0.000040215047,0.00008995425,0.000057666457,0.00016539129,0.00025992846,0.000034315854,0.00006251584,0.00020139218,9.353052e-7],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.002025159,0.00035610824,0.32005006,0.00014670579,0.000038979022,0.0004203936,0.0011935004,0.000009842186,0.6719416,0.000049902388,0.0006988945,0.0030688776],"study_design_scores_gemma":[0.0043613897,0.0014007799,0.91900235,0.00030089277,0.000030257284,0.000017473636,0.00008877495,0.000024969946,0.07449177,0.00018462348,0.00003360138,0.00006311384],"about_ca_topic_score_codex":0.0010057568,"about_ca_topic_score_gemma":0.00015407371,"teacher_disagreement_score":0.5989523,"about_ca_system_score_codex":0.00013926385,"about_ca_system_score_gemma":0.00019200199,"threshold_uncertainty_score":0.3668228},"labels":[],"label_agreement":null},{"id":"W4413904064","doi":"10.1016/j.humpath.2025.105926","title":"Assessment of Nectin4-expression in vulvar squamous cell carcinomas (VSCC): correlation with HPV-associated and HPV-independent molecular subtypes","year":2025,"lang":"en","type":"article","venue":"Human Pathology","topic":"Wnt/β-catenin signaling in development and cancer","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Vancouver General Hospital; University of British Columbia","funders":"","keywords":"Pathology; Correlation; Vulvar intraepithelial neoplasia; Medicine; Cancer research; Vulva","score_opus":0.0062211253212517284,"score_gpt":0.25005920914191704,"score_spread":0.2438380838206653,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4413904064","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99210536,0.0007487026,0.0019527293,0.00002042957,0.00009147149,0.00020268622,0.0000041213793,0.000010626525,0.004863862],"genre_scores_gemma":[0.99848485,0.00002642466,0.0005300848,0.000079950245,0.0000139832255,0.000035411158,0.00011973535,0.000015458729,0.00069410604],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99890697,0.00013995523,0.00026046185,0.0003739996,0.000116992866,0.00020159461],"domain_scores_gemma":[0.9995192,0.000019289664,0.00014908485,0.00019618588,0.00008663535,0.000029549068],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002534024,0.00015405065,0.00021477735,0.00011486494,0.00006909355,0.000009987902,0.00011282934,0.00022963136,0.000034887013],"category_scores_gemma":[0.000023114168,0.00014296651,0.000032461317,0.0001147879,0.00008651758,0.0000041269286,0.00010572138,0.0001449741,6.085422e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00004961734,0.0000968364,0.307702,0.00003134561,0.000012810756,0.00003363259,0.00009969551,0.00033647774,0.69125956,0.00015087613,0.00010215532,0.00012495209],"study_design_scores_gemma":[0.0016414752,0.0003817305,0.63675654,0.000027696833,0.000030563802,0.000007601623,0.00009358202,0.00006400694,0.36055678,0.000173192,0.00010335101,0.0001634579],"about_ca_topic_score_codex":0.000026315854,"about_ca_topic_score_gemma":0.00012934252,"teacher_disagreement_score":0.3307028,"about_ca_system_score_codex":0.00004160563,"about_ca_system_score_gemma":0.0001198423,"threshold_uncertainty_score":0.5830005},"labels":[],"label_agreement":null},{"id":"W4415448065","doi":"10.1016/j.humpath.2025.105958","title":"Porto-sinusoidal vascular disorder (PSVD): Survey-based analysis of the usage and drawbacks of this newly proposed terminology","year":2025,"lang":"en","type":"article","venue":"Human Pathology","topic":"Systemic Lupus Erythematosus Research","field":"Medicine","cited_by":6,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Mount Sinai Hospital","funders":"","keywords":"Terminology; Context (archaeology); Nodular regenerative hyperplasia; Portal hypertension; Disease; Etiology; Term (time)","score_opus":0.017741130446918957,"score_gpt":0.3222878718081455,"score_spread":0.30454674136122656,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4415448065","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9958697,0.00059077394,0.00038434193,0.0002220173,0.0000737234,0.00065505743,0.000035529683,0.00002037358,0.0021484713],"genre_scores_gemma":[0.9972345,0.000019360508,0.00016211493,0.00014012617,0.000012029507,0.00002045388,0.000055964865,0.000016868744,0.0023385868],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9974746,0.00085667806,0.0006336022,0.0004165074,0.00030644314,0.00031212906],"domain_scores_gemma":[0.998074,0.0003095252,0.00025592875,0.0010203503,0.00028453043,0.00005569928],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0011922931,0.00017759272,0.0009872536,0.0007547471,0.000096983225,0.000006253094,0.0002821562,0.00025462784,0.0002908786],"category_scores_gemma":[0.00046693155,0.00012039563,0.00028268748,0.0010502952,0.0009978891,0.0000199969,0.00018275052,0.0002569528,0.0000031215216],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009884635,0.00021030131,0.96783054,0.00055647665,0.0006990419,0.00007939653,0.0006427951,0.000008174906,0.02887999,0.0003678434,0.00022623273,0.00040033474],"study_design_scores_gemma":[0.002872163,0.0002707423,0.99135876,0.000161135,0.0011352918,0.00021855353,0.00020299833,0.00059710786,0.0027305183,0.00012843306,0.00021483068,0.00010944267],"about_ca_topic_score_codex":0.0004511781,"about_ca_topic_score_gemma":0.0010154817,"teacher_disagreement_score":0.026149474,"about_ca_system_score_codex":0.000043042826,"about_ca_system_score_gemma":0.00029431927,"threshold_uncertainty_score":0.4909591},"labels":[],"label_agreement":null},{"id":"W4417046448","doi":"10.1016/j.humpath.2025.106006","title":"Gene expression signatures of shortened-telomere-associated fibrotic interstitial lung disease","year":2025,"lang":"en","type":"article","venue":"Human Pathology","topic":"Telomeres, Telomerase, and Senescence","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia; Vancouver General Hospital","funders":"Mayo Clinic","keywords":"Telomere; Pulmonary fibrosis; Pathogenesis; Gene expression; Fibrosis; Idiopathic pulmonary fibrosis; Gene expression profiling; Lung","score_opus":0.013539337870658414,"score_gpt":0.29343292065969745,"score_spread":0.27989358278903903,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4417046448","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99524075,0.0017457023,0.000472873,0.00023775485,0.0003975361,0.00037965635,0.000040640058,0.00012047341,0.0013646015],"genre_scores_gemma":[0.99742675,0.00005309801,0.00027542587,0.0005925195,0.00009632655,0.000027163996,0.00016300466,0.000023498702,0.0013422419],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99835235,0.00015935459,0.00046332914,0.000446743,0.00021690795,0.000361343],"domain_scores_gemma":[0.9989556,0.00009696952,0.00014641733,0.00047837646,0.00014927966,0.00017333803],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00016404488,0.00022705607,0.00055086776,0.00035850398,0.00013455187,0.000009991184,0.00019317682,0.00022179467,0.00031518083],"category_scores_gemma":[0.00030241304,0.00020324724,0.00017841117,0.00025864365,0.00028639322,0.000056564175,0.00012815098,0.0003026478,0.000009481166],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0007166328,0.00061331695,0.09503941,0.00042661655,0.00011601582,0.0012787845,0.0005462425,0.000019963172,0.8925925,0.0014050789,0.005616819,0.0016286207],"study_design_scores_gemma":[0.0036979995,0.00052285916,0.80485374,0.0013473766,0.0005876964,0.000042565545,0.00022853042,0.00036428098,0.18592456,0.0016591768,0.00032375005,0.0004474664],"about_ca_topic_score_codex":0.000017321725,"about_ca_topic_score_gemma":0.000017887545,"teacher_disagreement_score":0.7098143,"about_ca_system_score_codex":0.00008218587,"about_ca_system_score_gemma":0.00013776789,"threshold_uncertainty_score":0.8288182},"labels":[],"label_agreement":null},{"id":"W799570093","doi":"10.1016/j.humpath.2015.06.017","title":"Sinonasal renal cell–like adenocarcinomas: robust carbonic anhydrase expression","year":2015,"lang":"en","type":"article","venue":"Human Pathology","topic":"Enzyme function and inhibition","field":"Biochemistry, Genetics and Molecular Biology","cited_by":37,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"Carbonic anhydrase; Pathology; Carbonic anhydrase II; Clear cell; Cytoplasm; Clear cell carcinoma; Cell; Adenocarcinoma; Enzyme; Biology; Renal cell carcinoma; Chemistry; Cancer research; Carcinoma; Medicine; Cell biology; Biochemistry; Internal medicine; Cancer","score_opus":0.03132648957804957,"score_gpt":0.24421218342985318,"score_spread":0.21288569385180361,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W799570093","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98441076,0.0008344128,0.0012963202,0.000056895282,0.00039179047,0.00011128535,0.00001005566,0.000040283383,0.012848189],"genre_scores_gemma":[0.99394065,0.00001564156,0.0004941837,0.00061613997,0.0005461439,0.000023903704,0.00044647823,0.000026931162,0.0038899288],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99885064,0.0001425684,0.00020189803,0.00041556358,0.0001207685,0.00026855664],"domain_scores_gemma":[0.999289,0.000004217231,0.000085841486,0.00037529922,0.000088313456,0.00015735498],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00018844954,0.00016205582,0.00013739955,0.000063801584,0.00010340978,0.000015910417,0.00012387535,0.00026106773,0.00010949502],"category_scores_gemma":[0.00002798787,0.00015709376,0.000073111776,0.000052700514,0.00011282889,0.000006154401,0.000118610194,0.00014542788,0.00006615171],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006467966,0.00008282768,0.0014334127,0.0000056458803,0.0000033900042,0.00005926453,0.00008754604,0.000119675744,0.94063944,0.00006510661,0.057393957,0.000045081895],"study_design_scores_gemma":[0.0023454775,0.0015534058,0.0030334373,0.000016854126,0.000025266267,0.00024088928,0.00024344007,0.00004505476,0.9442858,0.0002271778,0.047573663,0.00040950842],"about_ca_topic_score_codex":0.0000075049334,"about_ca_topic_score_gemma":0.000027289132,"teacher_disagreement_score":0.009820293,"about_ca_system_score_codex":0.000024253191,"about_ca_system_score_gemma":0.000069040216,"threshold_uncertainty_score":0.6406098},"labels":[],"label_agreement":null}]}